BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015246
(410 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255584082|ref|XP_002532784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527472|gb|EEF29603.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 487
Score = 582 bits (1501), Expect = e-164, Method: Compositional matrix adjust.
Identities = 270/409 (66%), Positives = 338/409 (82%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LIDAY +FVSF+A Y++LNRMREA ISPDVVTYNSLIAGA RN LL SL+L DEML MG
Sbjct: 78 LIDAYSRFVSFNAAYSLLNRMREASISPDVVTYNSLIAGAARNCLLLESLNLFDEMLNMG 137
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDVWSYN+LMHC F+LGK +EAN V + + L+PC TFNIM+NGLCKN +T NAL
Sbjct: 138 IVPDVWSYNTLMHCFFKLGKAEEANEVLRQIFGHGLSPCPTTFNIMINGLCKNGFTSNAL 197
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR L++HGFVP+L+TYNILI GLCK RLR AR +LKEL SG+ PNAITYTT+MK C
Sbjct: 198 MLFRSLKQHGFVPQLITYNILINGLCKDRRLRAARSMLKELETSGYVPNAITYTTVMKFC 257
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
FR+R++K GLEIL M KGYTFDGF YCTV+ +K GRL+EAT+YM QM+ +G++ D+
Sbjct: 258 FRSRRFKQGLEILQEMIDKGYTFDGFAYCTVVGVLIKTGRLEEATEYMRQMIKNGIEHDL 317
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
SYNTLINLYCK+G LEAAY LLDE+EK+G +CD+YTHTILI+ +CKAGNI GAR H+++
Sbjct: 318 ASYNTLINLYCKQGNLEAAYQLLDEIEKEGLQCDEYTHTILINWMCKAGNILGARRHMQH 377
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSA 361
MN +GFDS L A NC+VD L K+G+IDHA+ +FESM+++DSFTYSS+VHNLCK R A
Sbjct: 378 MNMMGFDSCLVALNCMVDGLCKNGQIDHAVKLFESMKMRDSFTYSSLVHNLCKNGRFHRA 437
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
SKLLLSCL+SG++IL SAQ+ V+ GLR+SG ++EA+K++SKI++A++ H
Sbjct: 438 SKLLLSCLRSGMKILPSAQRVVISGLRYSGFQKEARKLKSKIKLARMLH 486
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 115/239 (48%), Gaps = 4/239 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ A ++L + +G P+ +TY +++ R+ L++L EM++
Sbjct: 217 ILINGLCKDRRLRAARSMLKELETSGYVPNAITYTTVMKFCFRSRRFKQGLEILQEMIDK 276
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D ++Y +++ L + G+ +EA + MI + A++N ++N CK + A
Sbjct: 277 GYTFDGFAYCTVVGVLIKTGRLEEATEYMRQMIKNGIEHDLASYNTLINLYCKQGNLEAA 336
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ ++K G + T+ ILI +CKAG + AR ++ + G + ++
Sbjct: 337 YQLLDEIEKEGLQCDEYTHTILINWMCKAGNILGARRHMQHMNMMGFDSCLVALNCMVDG 396
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+N + +++ +MK + D F Y +++ K GR A+ + + G+++
Sbjct: 397 LCKNGQIDHAVKLFESMKMR----DSFTYSSLVHNLCKNGRFHRASKLLLSCLRSGMKI 451
>gi|225454807|ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Vitis vinifera]
Length = 457
Score = 572 bits (1475), Expect = e-161, Method: Compositional matrix adjust.
Identities = 267/409 (65%), Positives = 332/409 (81%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ AY +FV DA Y++++RM+EAGISPDV+TYNSLIA AT+ LLS SLDL +EML G
Sbjct: 48 LLSAYSRFVGIDAAYSVIHRMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTG 107
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDVWSYNSLMHC F+LGKPDEANRVFQD+I +L P ++TFNIM+NGLC N YT AL
Sbjct: 108 IRPDVWSYNSLMHCFFKLGKPDEANRVFQDIILTNLLPSSSTFNIMINGLCNNGYTGYAL 167
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++R LQ+ GFVPELVTYNILI GLCK+ +L AR IL+ELG+SG+ P+AITYTT+MKCC
Sbjct: 168 SLYRYLQRQGFVPELVTYNILINGLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCC 227
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
FR+R+++ G EI S MK KGY FD F YC VIAA K GRL+EA D MEQM + LDI
Sbjct: 228 FRSRQFEQGFEIFSEMKSKGYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDI 287
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
VSYNT++NLYC+ GKLEA Y LLDE+E+ G ECD+YTHTILIDGLCKAGN++GA HL+
Sbjct: 288 VSYNTVMNLYCRNGKLEATYKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKN 347
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSA 361
M K+GFDS L A NC++D L K G++DHAI +F SMEVKDSFTYSSMVHNLCKA+R A
Sbjct: 348 MTKMGFDSTLVAQNCVIDGLCKVGQLDHAIKMFASMEVKDSFTYSSMVHNLCKARRYRHA 407
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
S+LLL+CL+ G++IL++ Q++V+DGL +SG EA++++SKIR+A+I H
Sbjct: 408 SRLLLACLRGGMKILRANQRSVIDGLCYSGYTSEARRLKSKIRLARILH 456
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 125/296 (42%), Gaps = 39/296 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ +A IL + E+G PD +TY +++ R+ ++ EM
Sbjct: 187 ILINGLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSEMKSK 246
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D +SY +++ L + G+ +EAN + + M D+ ++N ++N C+N +
Sbjct: 247 GYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGKLEAT 306
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ +++HG + T+ ILI GLCKAG + A LK + G T + +
Sbjct: 307 YKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKNMTKMGFDS-----TLVAQN 361
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C VI K+G+L A M D
Sbjct: 362 C------------------------------VIDGLCKVGQLDHAIKMFASMEVK----D 387
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
+Y+++++ CK + A LL + G + + +IDGLC +G AR
Sbjct: 388 SFTYSSMVHNLCKARRYRHASRLLLACLRGGMKILRANQRSVIDGLCYSGYTSEAR 443
>gi|147832566|emb|CAN63846.1| hypothetical protein VITISV_010038 [Vitis vinifera]
Length = 457
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 255/385 (66%), Positives = 313/385 (81%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ AY +FV DA Y++++RM+EAGISPDV+TYNSLIA AT+ LLS SLDL +EML G
Sbjct: 48 LLSAYSRFVGIDAAYSVIHRMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTG 107
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDVWSYNSLMHC F+LGKPDEANRVFQD+I +L P ++TFNIM+NGLC N YT AL
Sbjct: 108 IRPDVWSYNSLMHCFFKLGKPDEANRVFQDIILTNLLPSSSTFNIMINGLCNNGYTGYAL 167
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++R LQ+ GFVPELVTYNILI GLCK+ +L AR IL+ELG+SG+ P+AITYTT+MKCC
Sbjct: 168 SLYRYLQRQGFVPELVTYNILINGLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCC 227
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
FR+R+++ G EI S MK KGY FD F YC VIAA K GRL+EA D MEQM + LDI
Sbjct: 228 FRSRQFEQGFEIFSEMKSKGYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDI 287
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
VSYNT++NLYC+ GKLEA Y LLDE+E+ G ECD+YTHTILIDGLCKAGN++GA HL+
Sbjct: 288 VSYNTVMNLYCRNGKLEATYKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKN 347
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSA 361
M K+GFDS L A NC++D L K G++DHAI +F SMEVKDSFTYSSMVHNLCKA+R A
Sbjct: 348 MTKMGFDSTLVAQNCVIDGLCKVGQLDHAIKMFASMEVKDSFTYSSMVHNLCKARRYRHA 407
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDG 386
S+LLL+CL+ G++IL++ Q++V+DG
Sbjct: 408 SRLLLACLRGGMKILRANQRSVIDG 432
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 4/273 (1%)
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
NI I LCK G+L A ++ + G P+ +TY T++ R ++ MK
Sbjct: 11 NICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYSVIHRMKE 70
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
G + D Y ++IAA K L + D E+M+ G++ D+ SYN+L++ + K GK +
Sbjct: 71 AGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCFFKLGKPDE 130
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A + ++ T I+I+GLC G A Y+ + GF L YN +++
Sbjct: 131 ANRVFQDIILTNLLPSSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELVTYNILIN 190
Query: 320 RLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
L K K++ A + ES V D+ TY++++ ++++ ++ G
Sbjct: 191 GLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSEMKSKGYAF 250
Query: 376 LKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+ AV+ L +G EA I ++ + I
Sbjct: 251 DAFSYCAVIAALTKTGRLEEANDIMEQMARSDI 283
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 144/330 (43%), Gaps = 39/330 (11%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
T NI + LCK + A + + G +P++VTYN L+ + + A ++
Sbjct: 7 TKLLNICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYSVIH 66
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
+ ++G +P+ ITY +++ + L++ M R G D + Y +++ F K+G
Sbjct: 67 RMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCFFKLG 126
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
+ EA + ++ + ++N +IN C G A L +++QGF + T+
Sbjct: 127 KPDEANRVFQDIILTNLLPSSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELVTYN 186
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIG--------------------FDSNLE-------- 312
ILI+GLCK+ + AR L + + G F+ E
Sbjct: 187 ILINGLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSEMKSK 246
Query: 313 -------AYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSA 361
+Y ++ L K G+++ A ++ E M D +Y+++++ C+ +L +
Sbjct: 247 GYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGKLEAT 306
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
KLL + G+ + ++DGL +G
Sbjct: 307 YKLLDEIEEHGLECDEYTHTILIDGLCKAG 336
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 114/239 (47%), Gaps = 4/239 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ +A IL + E+G PD +TY +++ R+ ++ EM
Sbjct: 187 ILINGLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSEMKSK 246
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D +SY +++ L + G+ +EAN + + M D+ ++N ++N C+N +
Sbjct: 247 GYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGKLEAT 306
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ +++HG + T+ ILI GLCKAG + A LK + G + ++
Sbjct: 307 YKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKNMTKMGFDSTLVAQNCVIDG 366
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + +++ ++M+ K D F Y +++ K R + A+ + + G+++
Sbjct: 367 LCKVGQLDHAIKMFASMEVK----DSFTYSSMVHNLCKARRYRHASRLLLACLRGGMKI 421
>gi|449467965|ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Cucumis sativus]
gi|449468117|ref|XP_004151768.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Cucumis sativus]
gi|449532400|ref|XP_004173169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Cucumis sativus]
Length = 456
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 254/406 (62%), Positives = 315/406 (77%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+F DA Y++L RMREAGISPDV+TYNSLIAGATRN L SLDL +EML+ G
Sbjct: 48 LIDGYCRFSGMDAAYSVLYRMREAGISPDVITYNSLIAGATRNFSLEQSLDLFEEMLQSG 107
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+WSYN+LMHC F LGKPDEA RVF+D+I DL+P TFN M+NGLCK+ YT NA+
Sbjct: 108 ITPDIWSYNTLMHCFFILGKPDEAYRVFKDIILKDLSPHPVTFNTMINGLCKHGYTSNAI 167
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR LQ+HGF+P+LVTYNILI GLCK RLR A +L E DSG PNA+TYTT+MK C
Sbjct: 168 MLFRNLQRHGFIPQLVTYNILINGLCKVDRLRAAIRMLNEAMDSGLEPNAVTYTTLMKSC 227
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
FR+R+Y+ G EI S MK KGY FDGF YCTV AF+K+GR +EA MEQM+ + V +DI
Sbjct: 228 FRSRQYERGFEIFSKMKNKGYAFDGFAYCTVSGAFLKLGRFEEAKFCMEQMIKNDVGIDI 287
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
YNT INLYCKEGKLEAAY L DE+E +G ECD YTH+I+ +GLC+ GNI+GA HL
Sbjct: 288 TFYNTFINLYCKEGKLEAAYKLFDEIEPRGLECDVYTHSIITNGLCRVGNIEGAMQHLNC 347
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSA 361
+ GF SNL A NC++DRL K G+ID AI +FESME +DSFTY+S+VHNLCKA+R A
Sbjct: 348 VYTTGFASNLVALNCLIDRLCKAGQIDRAIRLFESMETRDSFTYTSLVHNLCKARRFRCA 407
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
SKLL+SC + G+++LK+ ++AV+DGL SG EA+K++ K+R+A+
Sbjct: 408 SKLLISCSRDGMKVLKATRRAVIDGLCSSGFTSEARKLKFKLRLAR 453
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 4/279 (1%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
T NI + CK++ A + + G +P++VTYN LI G C+ + A +L
Sbjct: 7 TKFLNICVASFCKSQQMQKAEAVIIDGIRIGVLPDVVTYNTLIDGYCRFSGMDAAYSVLY 66
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
+ ++G +P+ ITY +++ RN + L++ M + G T D + Y T++ F +G
Sbjct: 67 RMREAGISPDVITYNSLIAGATRNFSLEQSLDLFEEMLQSGITPDIWSYNTLMHCFFILG 126
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
+ EA + ++ + V++NT+IN CK G A +L +++ GF T+
Sbjct: 127 KPDEAYRVFKDIILKDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLQRHGFIPQLVTYN 186
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
ILI+GLCK ++ A L G + N Y ++ + + + +F M+ K
Sbjct: 187 ILINGLCKVDRLRAAIRMLNEAMDSGLEPNAVTYTTLMKSCFRSRQYERGFEIFSKMKNK 246
Query: 341 ----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
D F Y ++ K R A + +K+ V I
Sbjct: 247 GYAFDGFAYCTVSGAFLKLGRFEEAKFCMEQMIKNDVGI 285
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 122/296 (41%), Gaps = 39/296 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ A +LN ++G+ P+ VTY +L+ R+ ++ +M
Sbjct: 187 ILINGLCKVDRLRAAIRMLNEAMDSGLEPNAVTYTTLMKSCFRSRQYERGFEIFSKMKNK 246
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D ++Y ++ +LG+ +EA + MI D+ +N +N CK + A
Sbjct: 247 GYAFDGFAYCTVSGAFLKLGRFEEAKFCMEQMIKNDVGIDITFYNTFINLYCKEGKLEAA 306
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F ++ G ++ T++I+ GLC+ G + A L + +G A N + + C
Sbjct: 307 YKLFDEIEPRGLECDVYTHSIITNGLCRVGNIEGAMQHLNCVYTTGFASNLVA----LNC 362
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+I K G++ A E M T D
Sbjct: 363 -------------------------------LIDRLCKAGQIDRAIRLFESMETR----D 387
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
+Y +L++ CK + A LL + G + K T +IDGLC +G AR
Sbjct: 388 SFTYTSLVHNLCKARRFRCASKLLISCSRDGMKVLKATRRAVIDGLCSSGFTSEAR 443
>gi|356506793|ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Glycine max]
Length = 461
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 250/407 (61%), Positives = 325/407 (79%), Gaps = 3/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LIDAYC+F + D Y++L RM +AGI PDVV++N+LI+GA R SL S SLDL DEML+ G
Sbjct: 54 LIDAYCRFATLDVAYSVLARMHDAGIPPDVVSFNTLISGAVRKSLFSKSLDLFDEMLKRG 113
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD-LTPCTATFNIMLNGLCKNRYTDNA 120
I PD WS+N LM+CLFQLGKPDEANRVF++++ D + P AT+NIM+NGLCKN Y NA
Sbjct: 114 INPDAWSHNILMNCLFQLGKPDEANRVFKEIVLRDEVHP--ATYNIMINGLCKNGYVGNA 171
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +FR LQ+HGFVP+++TYN LI GLCKA RL+ AR +LKE G++G+ PNA+TYTT+M C
Sbjct: 172 LSLFRNLQRHGFVPQVLTYNALINGLCKARRLKDARRVLKEFGETGNEPNAVTYTTVMTC 231
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
CFR R ++ GLEILS M+ G+TFDGF YCTVIAA +K GR++EA + +E MV+ GV+ D
Sbjct: 232 CFRCRLFEEGLEILSEMRSLGFTFDGFAYCTVIAAMIKTGRMQEAEEIVEMMVSSGVRPD 291
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+VSYNTLINLYC++G+L+ A LLDE+E +G ECD+YTHTI++DGLCKAGN GA+ HL
Sbjct: 292 LVSYNTLINLYCRQGRLDDALRLLDEIEGEGLECDQYTHTIIVDGLCKAGNFDGAQRHLN 351
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPS 360
YMN +GF SNL A+NC +D LGK G IDHA+ +FE MEVKDSFTY+ +VHNLC+A+R
Sbjct: 352 YMNSLGFGSNLVAFNCFLDGLGKAGHIDHALRLFEVMEVKDSFTYTIVVHNLCRARRFLC 411
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
ASK+L+SCLK G ++L++ Q+AV+ GLR G EA+K++ IR+A+
Sbjct: 412 ASKVLVSCLKCGYQVLRATQRAVIVGLRSIGYANEARKVKLTIRLAQ 458
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 131/278 (47%), Gaps = 5/278 (1%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
T NI ++ LCK + NA + G +P++VTYN LI C+ L A +L
Sbjct: 13 TKLLNITVSSLCKAKQIPNAETAIVDGIRLGVLPDVVTYNTLIDAYCRFATLDVAYSVLA 72
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
+ D+G P+ +++ T++ R + L++ M ++G D + + ++ ++G
Sbjct: 73 RMHDAGIPPDVVSFNTLISGAVRKSLFSKSLDLFDEMLKRGINPDAWSHNILMNCLFQLG 132
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
+ EA +++V ++ +YN +IN CK G + A L +++ GF T+
Sbjct: 133 KPDEANRVFKEIVLRD-EVHPATYNIMINGLCKNGYVGNALSLFRNLQRHGFVPQVLTYN 191
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 338
LI+GLCKA +K AR L+ + G + N Y ++ + + + + M
Sbjct: 192 ALINGLCKARRLKDARRVLKEFGETGNEPNAVTYTTVMTCCFRCRLFEEGLEILSEMRSL 251
Query: 339 --VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
D F Y +++ + K R+ A +++ + SGVR
Sbjct: 252 GFTFDGFAYCTVIAAMIKTGRMQEAEEIVEMMVSSGVR 289
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 120/289 (41%), Gaps = 39/289 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ ++ ++ G P V+TYN+LI G + L + +L E E
Sbjct: 157 IMINGLCKNGYVGNALSLFRNLQRHGFVPQVLTYNALINGLCKARRLKDARRVLKEFGET 216
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ +Y ++M C F+ +E + +M T + ++ + K A
Sbjct: 217 GNEPNAVTYTTVMTCCFRCRLFEEGLEILSEMRSLGFTFDGFAYCTVIAAMIKTGRMQEA 276
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P+LV+YN LI C+ GRL A +L E+ G + T+T I+
Sbjct: 277 EEIVEMMVSSGVRPDLVSYNTLINLYCRQGRLDDALRLLDEIEGEGLECDQYTHTIIVD- 335
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
G C K G A ++ M + G +
Sbjct: 336 ---------------------------GLC-------KAGNFDGAQRHLNYMNSLGFGSN 361
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
+V++N ++ K G ++ A L + ME + D +T+TI++ LC+A
Sbjct: 362 LVAFNCFLDGLGKAGHIDHALRLFEVMEVK----DSFTYTIVVHNLCRA 406
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 89/177 (50%), Gaps = 7/177 (3%)
Query: 230 EQMVTDGVQL----DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
E + DG++L D+V+YNTLI+ YC+ L+ AY +L M G D + LI G
Sbjct: 33 ETAIVDGIRLGVLPDVVTYNTLIDAYCRFATLDVAYSVLARMHDAGIPPDVVSFNTLISG 92
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-- 343
+ + + M K G + + ++N +++ L + GK D A VF+ + ++D
Sbjct: 93 AVRKSLFSKSLDLFDEMLKRGINPDAWSHNILMNCLFQLGKPDEANRVFKEIVLRDEVHP 152
Query: 344 -TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
TY+ M++ LCK + +A L + + G A+++GL + ++A+++
Sbjct: 153 ATYNIMINGLCKNGYVGNALSLFRNLQRHGFVPQVLTYNALINGLCKARRLKDARRV 209
>gi|224089585|ref|XP_002308767.1| predicted protein [Populus trichocarpa]
gi|222854743|gb|EEE92290.1| predicted protein [Populus trichocarpa]
Length = 454
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 251/405 (61%), Positives = 326/405 (80%), Gaps = 3/405 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+AY +FVSFDA Y++L+RM+EA I PD+VTYNSLIAGA R+ LLS +DL +EMLE+G
Sbjct: 48 LINAYSRFVSFDAAYSVLDRMKEASIKPDIVTYNSLIAGAMRHCLLSNCMDLFEEMLELG 107
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+WSYN+LMHC F+L +PD+A RVF D+I L+P AT+N MLNGLCK + +NAL
Sbjct: 108 IKPDIWSYNTLMHCFFKLERPDDAYRVFTDIILCYLSPSQATYNTMLNGLCKCGFVENAL 167
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR L++HGFVP LVTYNILI GLCKA +L+TARW+LKELG SG PN ITYTT+M+CC
Sbjct: 168 MLFRKLKRHGFVPSLVTYNILINGLCKAWKLKTARWMLKELGASGLVPNVITYTTVMRCC 227
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
FR+R+++ GLEI M KGYTFDGF YCTV+ A VK R++EA+ YME+MV + LD+
Sbjct: 228 FRSRRFEQGLEIFEEMIDKGYTFDGFAYCTVVGALVKTCRIEEASHYMERMVNTDIGLDM 287
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
SYNTLINLYCK GKLE A+ +LD+MEK+GFE D+YT+TIL++GLC+ G+++GA +EY
Sbjct: 288 ASYNTLINLYCKGGKLEMAHGVLDKMEKEGFERDEYTNTILMNGLCEEGDVEGA---MEY 344
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSA 361
MN GF+SNL A N +VDR K +ID+A +F+SM+++DSFTYSS++HNLCK R A
Sbjct: 345 MNVAGFNSNLVALNTMVDRWCKADQIDYAFKIFDSMDMRDSFTYSSLIHNLCKVGRFRCA 404
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
SKLLLSC++S RIL SA++AV D LRHSG +REAK+++S+I++A
Sbjct: 405 SKLLLSCVRSRTRILPSAKRAVFDCLRHSGHQREAKRLKSEIKLA 449
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 125/266 (46%), Gaps = 4/266 (1%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
T NI + CK ++ A + + G +P++VTYN LI + A +L
Sbjct: 7 TRFLNICIASFCKAKHLQRAETVIIDGVRLGVLPDVVTYNTLINAYSRFVSFDAAYSVLD 66
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
+ ++ P+ +TY +++ R+ +++ M G D + Y T++ F K+
Sbjct: 67 RMKEASIKPDIVTYNSLIAGAMRHCLLSNCMDLFEEMLELGIKPDIWSYNTLMHCFFKLE 126
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
R +A ++ + +YNT++N CK G +E A +L ++++ GF T+
Sbjct: 127 RPDDAYRVFTDIILCYLSPSQATYNTMLNGLCKCGFVENALMLFRKLKRHGFVPSLVTYN 186
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
ILI+GLCKA +K AR L+ + G N+ Y ++ + + + + +FE M K
Sbjct: 187 ILINGLCKAWKLKTARWMLKELGASGLVPNVITYTTVMRCCFRSRRFEQGLEIFEEMIDK 246
Query: 341 ----DSFTYSSMVHNLCKAKRLPSAS 362
D F Y ++V L K R+ AS
Sbjct: 247 GYTFDGFAYCTVVGALVKTCRIEEAS 272
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 110/226 (48%), Gaps = 7/226 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ +L + +G+ P+V+TY +++ R+ L++ +EM++
Sbjct: 187 ILINGLCKAWKLKTARWMLKELGASGLVPNVITYTTVMRCCFRSRRFEQGLEIFEEMIDK 246
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D ++Y +++ L + + +EA+ + M+ D+ A++N ++N CK + A
Sbjct: 247 GYTFDGFAYCTVVGALVKTCRIEEASHYMERMVNTDIGLDMASYNTLINLYCKGGKLEMA 306
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++K GF + T IL+ GLC+ G + A ++ + +G N + T++
Sbjct: 307 HGVLDKMEKEGFERDEYTNTILMNGLCEEGDVEGA---MEYMNVAGFNSNLVALNTMVDR 363
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
+ + +I +M + D F Y ++I K+GR + A+
Sbjct: 364 WCKADQIDYAFKIFDSMDMR----DSFTYSSLIHNLCKVGRFRCAS 405
>gi|297737331|emb|CBI26532.3| unnamed protein product [Vitis vinifera]
Length = 441
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 252/409 (61%), Positives = 316/409 (77%), Gaps = 16/409 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ AY +FV DA Y++++RM+EAGISPDV+TYNSLIA AT+ LLS SLDL +EML G
Sbjct: 48 LLSAYSRFVGIDAAYSVIHRMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTG 107
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDVWSYNSLMH + I +L P ++TFNIM+NGLC N YT AL
Sbjct: 108 IRPDVWSYNSLMHYI----------------ILTNLLPSSSTFNIMINGLCNNGYTGYAL 151
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++R LQ+ GFVPELVTYNILI GLCK+ +L AR IL+ELG+SG+ P+AITYTT+MKCC
Sbjct: 152 SLYRYLQRQGFVPELVTYNILINGLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCC 211
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
FR+R+++ G EI S MK KGY FD F YC VIAA K GRL+EA D MEQM + LDI
Sbjct: 212 FRSRQFEQGFEIFSEMKSKGYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDI 271
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
VSYNT++NLYC+ GKLEA Y LLDE+E+ G ECD+YTHTILIDGLCKAGN++GA HL+
Sbjct: 272 VSYNTVMNLYCRNGKLEATYKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKN 331
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSA 361
M K+GFDS L A NC++D L K G++DHAI +F SMEVKDSFTYSSMVHNLCKA+R A
Sbjct: 332 MTKMGFDSTLVAQNCVIDGLCKVGQLDHAIKMFASMEVKDSFTYSSMVHNLCKARRYRHA 391
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
S+LLL+CL+ G++IL++ Q++V+DGL +SG EA++++SKIR+A+I H
Sbjct: 392 SRLLLACLRGGMKILRANQRSVIDGLCYSGYTSEARRLKSKIRLARILH 440
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 151/335 (45%), Gaps = 23/335 (6%)
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
L ++G+ ++A V D I L P T+N +L+ + D A + +++ G P+
Sbjct: 17 LCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYSVIHRMKEAGISPD 76
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF------------- 182
++TYN LI K L + + +E+ +G P+ +Y ++M
Sbjct: 77 VITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHYIILTNLLPSSSTFNI 136
Query: 183 ------RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
N L + ++R+G+ + Y +I K +L A + ++ G
Sbjct: 137 MINGLCNNGYTGYALSLYRYLQRQGFVPELVTYNILINGLCKSRKLNAARRILRELGESG 196
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
D ++Y T++ + + E + + EM+ +G+ D +++ +I L K G ++ A
Sbjct: 197 NVPDAITYTTVMKCCFRSRQFEQGFEIFSEMKSKGYAFDAFSYCAVIAALTKTGRLEEAN 256
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
+E M + D ++ +YN +++ ++GK++ + + +E D +T++ ++ L
Sbjct: 257 DIMEQMARSDIDLDIVSYNTVMNLYCRNGKLEATYKLLDEIEEHGLECDEYTHTILIDGL 316
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
CKA + A + L + K G AQ V+DGL
Sbjct: 317 CKAGNVEGALRHLKNMTKMGFDSTLVAQNCVIDGL 351
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 116/257 (45%), Gaps = 23/257 (8%)
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
NI I LCK G+L A ++ + G P+ +TY T++ R ++ MK
Sbjct: 11 NICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYSVIHRMKE 70
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL------------ 247
G + D Y ++IAA K L + D E+M+ G++ D+ SYN+L
Sbjct: 71 AGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHYIILTNLLPS 130
Query: 248 -------INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IN C G A L +++QGF + T+ ILI+GLCK+ + AR L
Sbjct: 131 SSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELVTYNILINGLCKSRKLNAARRILR 190
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
+ + G + Y ++ + + + +F M+ K D+F+Y +++ L K
Sbjct: 191 ELGESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSEMKSKGYAFDAFSYCAVIAALTKTG 250
Query: 357 RLPSASKLLLSCLKSGV 373
RL A+ ++ +S +
Sbjct: 251 RLEEANDIMEQMARSDI 267
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 125/296 (42%), Gaps = 39/296 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ +A IL + E+G PD +TY +++ R+ ++ EM
Sbjct: 171 ILINGLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSEMKSK 230
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D +SY +++ L + G+ +EAN + + M D+ ++N ++N C+N +
Sbjct: 231 GYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGKLEAT 290
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ +++HG + T+ ILI GLCKAG + A LK + G T + +
Sbjct: 291 YKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKNMTKMGFDS-----TLVAQN 345
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C VI K+G+L A M D
Sbjct: 346 C------------------------------VIDGLCKVGQLDHAIKMFASMEVK----D 371
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
+Y+++++ CK + A LL + G + + +IDGLC +G AR
Sbjct: 372 SFTYSSMVHNLCKARRYRHASRLLLACLRGGMKILRANQRSVIDGLCYSGYTSEAR 427
>gi|357503117|ref|XP_003621847.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496862|gb|AES78065.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 457
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 244/410 (59%), Positives = 321/410 (78%), Gaps = 1/410 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+FV DA Y ILNRM+EAGI+PDVV+YNSL +GA R LL SLDL DEML+ G
Sbjct: 48 LIDGYCRFVGIDAAYNILNRMKEAGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSG 107
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PDVWSYN LMHC F+LGKP+EAN VF+D+ G++ P A++N+M+NGLCKN Y +NA
Sbjct: 108 IRPDVWSYNILMHCYFRLGKPEEANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNA 167
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +FR L++ GFVPE++TYN +I GLCKA RL AR +L E D G PNAITYTT+MKC
Sbjct: 168 LMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEFCDFGFEPNAITYTTVMKC 227
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
CFR + + GLEILS M+RKG+TFDGF YCTV+AA VK GR++EA + E+M+++G+ D
Sbjct: 228 CFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLVPD 287
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ SYNT+INL+C++G+ + A L+DE+EKQG +CD+YTHTI+I GLCK GN +GA HL+
Sbjct: 288 LASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIIIHGLCKDGNFEGAEKHLD 347
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPS 360
YMN +GF NL A+N I+D LGK G ID A+ VF+SMEVKDSFTY+S++HNLC+AK+
Sbjct: 348 YMNTLGFGFNLVAFNSILDCLGKAGDIDKAVKVFDSMEVKDSFTYTSLLHNLCRAKKFRI 407
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
ASKLL++ ++ G +IL++ Q+AV+DGL SG EA+K++ KI+ A++ H
Sbjct: 408 ASKLLVASIEDGFQILRATQRAVIDGLTTSGLVYEARKVKLKIQRARLVH 457
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 131/278 (47%), Gaps = 5/278 (1%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
T NI ++ +CK+ A + K G P+++TYN LI G C+ + A IL
Sbjct: 7 TKFMNITISTMCKSNQIAKAETVLIDGIKLGLNPDIITYNTLIDGYCRFVGIDAAYNILN 66
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
+ ++G P+ ++Y ++ R + L++ M + G D + Y ++ + ++G
Sbjct: 67 RMKEAGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNILMHCYFRLG 126
Query: 221 RLKEATDYMEQMVTDG-VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
+ +EA + G + + SYN +IN CK G + A +L + ++GF + T+
Sbjct: 127 KPEEANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTY 186
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
+I+GLCKA + AR L GF+ N Y ++ + G+++ + + M
Sbjct: 187 NAMINGLCKARRLADARRVLNEFCDFGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRR 246
Query: 340 K----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
K D F Y ++V L K R+ A ++ + +G+
Sbjct: 247 KGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGL 284
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 137/296 (46%), Gaps = 4/296 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ + + +R G P+V+TYN++I G + L+ + +L+E +
Sbjct: 153 VMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEFCDF 212
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ +Y ++M C F+ G+ ++ + +M T + ++ L K + A
Sbjct: 213 GFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIEEA 272
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + +G VP+L +YN +I C+ GR A ++ E+ G + T+T I+
Sbjct: 273 DEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIIIHG 332
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ ++ + L M G+ F+ + +++ K G + +A + M D
Sbjct: 333 LCKDGNFEGAEKHLDYMNTLGFGFNLVAFNSILDCLGKAGDIDKAVKVFDSMEVK----D 388
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
+Y +L++ C+ K A LL + GF+ + T +IDGL +G + AR
Sbjct: 389 SFTYTSLLHNLCRAKKFRIASKLLVASIEDGFQILRATQRAVIDGLTTSGLVYEAR 444
>gi|449451938|ref|XP_004143717.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Cucumis sativus]
Length = 460
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/414 (50%), Positives = 289/414 (69%), Gaps = 8/414 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YCQF DA Y++ ++MR+AGI+P+V Y SL+A A+RNS L L+L EML++
Sbjct: 47 ILINGYCQFSDMDAAYSVFHKMRDAGITPNVFIYTSLMAAASRNSSLEQCLNLFHEMLQL 106
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PDVWSY +L HC ++GKPDEAN +F D I D +P ATF++M+ G C YT NA
Sbjct: 107 GITPDVWSYTTLTHCFLKVGKPDEANSIFLDFILKDHSPNPATFDVMIFGFCSCGYTSNA 166
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT-------ARWILKELGDSGHAPNAIT 173
+ +FR LQ HG VP+ VTY+IL+ GLCKA RL A + E DSG P++ T
Sbjct: 167 ITLFRNLQSHGLVPKFVTYDILLTGLCKAARLNVSVSMFNEAMSMFNEAIDSGFEPDSTT 226
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
Y +MKCCF+ R+Y+ G EI MK KG F+GFGY T I A +++GRL+EA +M +M+
Sbjct: 227 YIALMKCCFKFREYQHGFEIFFEMKNKGLAFNGFGYYTAIGALLRLGRLEEAKFFMVEMI 286
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
+GV ++V YNT++NLYCK GKLEAA+ +LD++E +G +C+ YTH I+ DGLCK GN +
Sbjct: 287 KNGVVFNLVFYNTVVNLYCKHGKLEAAHKMLDKIESRGLQCNDYTHAIITDGLCKVGNFE 346
Query: 294 GARLHLEYMNKIGF-DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
GAR HL Y+ GF +SN+ A +C++DRL K G+ID A+ +FE ME KD + Y+S++HNL
Sbjct: 347 GARRHLNYIYPTGFTNSNVVASSCLIDRLCKAGQIDQAMQLFELMETKDPYVYTSLMHNL 406
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
CKA+R ASKLLL CL+SG+ + +S Q AV+ GL G EA+K++ I ++
Sbjct: 407 CKARRFLCASKLLLDCLRSGISVFRSTQCAVIFGLCSFGFTSEARKLKPFIHLS 460
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 135/319 (42%), Gaps = 18/319 (5%)
Query: 97 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 156
LT C A+F CK+ A + + G VP+++TYNILI G C+ + A
Sbjct: 10 LTICVASF-------CKSHQFQKAEIAIKDAIRLGVVPDILTYNILINGYCQFSDMDAAY 62
Query: 157 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 216
+ ++ D+G PN YT++M RN + L + M + G T D + Y T+ F
Sbjct: 63 SVFHKMRDAGITPNVFIYTSLMAAASRNSSLEQCLNLFHEMLQLGITPDVWSYTTLTHCF 122
Query: 217 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
+K+G+ EA + + +++ +I +C G A L ++ G
Sbjct: 123 LKVGKPDEANSIFLDFILKDHSPNPATFDVMIFGFCSCGYTSNAITLFRNLQSHGLVPKF 182
Query: 277 YTHTILIDGLCKAGNIK-GARLHLEYMNKI------GFDSNLEAYNCIVDRLGKDGKIDH 329
T+ IL+ GLCKA + + E M+ GF+ + Y ++ K + H
Sbjct: 183 VTYDILLTGLCKAARLNVSVSMFNEAMSMFNEAIDSGFEPDSTTYIALMKCCFKFREYQH 242
Query: 330 AINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 385
+F M+ K + F Y + + L + RL A ++ +K+GV VV+
Sbjct: 243 GFEIFFEMKNKGLAFNGFGYYTAIGALLRLGRLEEAKFFMVEMIKNGVVFNLVFYNTVVN 302
Query: 386 GLRHSGCRREAKKIQSKIR 404
G A K+ KI
Sbjct: 303 LYCKHGKLEAAHKMLDKIE 321
>gi|68566156|sp|P0C043.1|PP318_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At4g17915
Length = 463
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/410 (51%), Positives = 289/410 (70%), Gaps = 2/410 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI YC+FV + Y + RMR+AGI PDV TYNSLIAGA R +L L L DEMLE G
Sbjct: 54 LISGYCRFVGIEEAYAVTRRMRDAGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWG 113
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRV-FQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PD+WSYN+LM C F+LGK +EA RV ++D+ L P T+N++L+ LCK Y DNA
Sbjct: 114 IYPDLWSYNTLMCCYFKLGKHEEAFRVLYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNA 173
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F+ +Q F PEL+TYNILI GLCK+ R+ TA+W+L EL SG+ PNA+TYTTI+K
Sbjct: 174 LELFKEMQSR-FKPELMTYNILINGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKL 232
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+ R+ + GL++ MKR+GYT+DG+ Y V++A +K GR KEA +YM+++V G + D
Sbjct: 233 YFKTRRIRRGLQLFLEMKREGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRRHD 292
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IVSYNTL+NLY K+G L+A LL E+E++G + D+YTHTI+++GL + G + A H
Sbjct: 293 IVSYNTLLNLYFKDGNLDAVDDLLGEIERRGMKADEYTHTIIVNGLLRTGQTRRAEEHFV 352
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPS 360
M ++G NL NC+VD L K G +D A+ FESMEVKD +TY+S+VHNLCK R
Sbjct: 353 SMGEMGIGLNLVTCNCLVDGLCKAGHVDRAMRYFESMEVKDEYTYTSVVHNLCKDMRFVC 412
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
ASKLLLSC G++I SA++AV+ GLR SGC EA+K ++++++ + +
Sbjct: 413 ASKLLLSCYNKGIKIPTSARRAVLSGLRMSGCYGEARKAKAEMKLTLVGN 462
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 133/279 (47%), Gaps = 6/279 (2%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
T NI ++ LCK R + A + + G P++VTYN LI G C+ + A + +
Sbjct: 13 TRLLNICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVTR 72
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
+ D+G P+ TY +++ R L + M G D + Y T++ + K+G
Sbjct: 73 RMRDAGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFKLG 132
Query: 221 RLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
+ +EA + + + G+ +YN L++ CK G ++ A L EM+ + F+ + T+
Sbjct: 133 KHEEAFRVLYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEMQSR-FKPELMTY 191
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
ILI+GLCK+ + A+ L + K G+ N Y I+ K +I + +F M+
Sbjct: 192 NILINGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQLFLEMKR 251
Query: 340 K----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
+ D + Y ++V L K R A + + ++ G R
Sbjct: 252 EGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRR 290
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 160/335 (47%), Gaps = 8/335 (2%)
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N + L + K ++A + D I + P T+N +++G C+ + A + R ++
Sbjct: 17 NICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVTRRMRD 76
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G P++ TYN LI G + L ++ E+ + G P+ +Y T+M C F+ K++
Sbjct: 77 AGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFKLGKHEE 136
Query: 190 GLEIL-SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
+L ++ G Y ++ A K G + A + ++M + + ++++YN LI
Sbjct: 137 AFRVLYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEMQSR-FKPELMTYNILI 195
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGF 307
N CK ++ A +L E++K G+ + T+T ++ K I +G +L LE M + G+
Sbjct: 196 NGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQLFLE-MKREGY 254
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASK 363
+ AY +V L K G+ A + + K D +Y+++++ K L +
Sbjct: 255 TYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRRHDIVSYNTLLNLYFKDGNLDAVDD 314
Query: 364 LLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
LL + G++ + +V+GL +G R A++
Sbjct: 315 LLGEIERRGMKADEYTHTIIVNGLLRTGQTRRAEE 349
>gi|297800292|ref|XP_002868030.1| hypothetical protein ARALYDRAFT_914908 [Arabidopsis lyrata subsp.
lyrata]
gi|297313866|gb|EFH44289.1| hypothetical protein ARALYDRAFT_914908 [Arabidopsis lyrata subsp.
lyrata]
Length = 463
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/410 (51%), Positives = 290/410 (70%), Gaps = 2/410 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI YC+FV + GY + RMR+AGI PDV TYNSLIAGA R +L L L DEMLE G
Sbjct: 54 LISGYCRFVGIEEGYAVTLRMRDAGIRPDVATYNSLIAGAARRLMLDRVLYLFDEMLEWG 113
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRV-FQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PD+WSYN+LM C F+LGK +EA RV ++D+ L+P T+N++L+ LCK Y DNA
Sbjct: 114 IYPDLWSYNTLMCCYFKLGKHEEAFRVLYKDLQLAGLSPGPDTYNVLLDALCKCGYIDNA 173
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F+ +Q F PEL+TYNILI GLCK+ R+ TA+W+L EL SG+ PNA+TYTTI+K
Sbjct: 174 LELFKEMQSK-FKPELMTYNILINGLCKSRRVGTAKWMLTELKRSGYTPNAVTYTTILKL 232
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ R+ + GL++ MKR+GYT+DG+ Y V++A +K GR KEA +YM+++V G + D
Sbjct: 233 YIKTRRIRRGLQLFLEMKREGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRRHD 292
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IVSYNTL+NLY K+G L+A LL E+E++G + D+YTHTI+++GL + G + A H
Sbjct: 293 IVSYNTLLNLYFKDGNLDAVDDLLGEIERKGMKADEYTHTIIVNGLLRTGQTRRAEEHFV 352
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPS 360
M ++G NL NC+VD L K G +D A+ FESMEVKD +TY+S+VHNLCK R
Sbjct: 353 SMGEMGIGLNLVTCNCLVDGLCKAGHVDRAMRYFESMEVKDEYTYTSVVHNLCKDMRFVC 412
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
ASKLLLSC G++I SA++AV+ GLR SGC EA+K ++K+++ + +
Sbjct: 413 ASKLLLSCYNKGIKIPTSARRAVLSGLRMSGCYGEARKAKAKMKLTLVGN 462
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 131/279 (46%), Gaps = 6/279 (2%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
T NI ++ LCK R + A + + G P++VTYN LI G C+ + +
Sbjct: 13 TRLLNICVDSLCKFRKLEKAETLIIDGIRLGVAPDVVTYNTLISGYCRFVGIEEGYAVTL 72
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
+ D+G P+ TY +++ R L + M G D + Y T++ + K+G
Sbjct: 73 RMRDAGIRPDVATYNSLIAGAARRLMLDRVLYLFDEMLEWGIYPDLWSYNTLMCCYFKLG 132
Query: 221 RLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
+ +EA + + + G+ +YN L++ CK G ++ A L EM+ + F+ + T+
Sbjct: 133 KHEEAFRVLYKDLQLAGLSPGPDTYNVLLDALCKCGYIDNALELFKEMQSK-FKPELMTY 191
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
ILI+GLCK+ + A+ L + + G+ N Y I+ K +I + +F M+
Sbjct: 192 NILINGLCKSRRVGTAKWMLTELKRSGYTPNAVTYTTILKLYIKTRRIRRGLQLFLEMKR 251
Query: 340 K----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
+ D + Y ++V L K R A + + ++ G R
Sbjct: 252 EGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRR 290
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 159/335 (47%), Gaps = 8/335 (2%)
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N + L + K ++A + D I + P T+N +++G C+ + + ++
Sbjct: 17 NICVDSLCKFRKLEKAETLIIDGIRLGVAPDVVTYNTLISGYCRFVGIEEGYAVTLRMRD 76
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G P++ TYN LI G + L ++ E+ + G P+ +Y T+M C F+ K++
Sbjct: 77 AGIRPDVATYNSLIAGAARRLMLDRVLYLFDEMLEWGIYPDLWSYNTLMCCYFKLGKHEE 136
Query: 190 GLEIL-SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
+L ++ G + Y ++ A K G + A + ++M + + ++++YN LI
Sbjct: 137 AFRVLYKDLQLAGLSPGPDTYNVLLDALCKCGYIDNALELFKEMQSK-FKPELMTYNILI 195
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGF 307
N CK ++ A +L E+++ G+ + T+T ++ K I +G +L LE M + G+
Sbjct: 196 NGLCKSRRVGTAKWMLTELKRSGYTPNAVTYTTILKLYIKTRRIRRGLQLFLE-MKREGY 254
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASK 363
+ AY +V L K G+ A + + K D +Y+++++ K L +
Sbjct: 255 TYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRRHDIVSYNTLLNLYFKDGNLDAVDD 314
Query: 364 LLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
LL + G++ + +V+GL +G R A++
Sbjct: 315 LLGEIERKGMKADEYTHTIIVNGLLRTGQTRRAEE 349
>gi|326527525|dbj|BAK08037.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 460
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/407 (50%), Positives = 281/407 (69%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A+C+ DAG+ +L+RMREAG+SPD +TYNSLIAGA R L +LDL DEML+ G
Sbjct: 51 LLAAHCRASGLDAGFAVLHRMREAGVSPDAITYNSLIAGAARRGLTMRALDLFDEMLQAG 110
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD WSYN+LMHCLF+ G P++A RVF DM + PC T+N +L+GL + + NA
Sbjct: 111 VAPDAWSYNALMHCLFRSGHPEDAYRVFADMAEKGVAPCATTYNTLLDGLFRFGHATNAY 170
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
RMFR LQ+ G +VTYN +I GLCK+G++ AR +L+ELG + HAPN +TYTT+MKCC
Sbjct: 171 RMFRYLQRTGLPVGIVTYNTMINGLCKSGKVGYARMVLRELGRTEHAPNVVTYTTVMKCC 230
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ ++ GLE ++ GY D F YCTVI+A VK GR++EA Y E M+ G +LD
Sbjct: 231 FKYGRFDQGLETFLSLLEGGYIPDLFPYCTVISALVKKGRMEEANTYSELMIRSGFRLDS 290
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
YNTLI L CKEGKL+ A+ LL ME+ G E D+YT +IL++GLCK G+ + A L Y
Sbjct: 291 ACYNTLIYLRCKEGKLDDAFELLSMMEEGGLESDEYTFSILVNGLCKMGHFEAAHKQLCY 350
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSA 361
M +SN+ AYNC+VD L K ++D AI + +M++KD FTY+S+VH LCK R A
Sbjct: 351 MEIRDMESNVIAYNCLVDALCKSDEVDAAIKLLHNMKLKDDFTYTSLVHGLCKVGRYHMA 410
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
SK L CL+ G IL SA++AV+ GLR +G + + +K+++ +RMA++
Sbjct: 411 SKFLRICLREGNSILASAKRAVIAGLRSAGFQNDVRKVRAALRMARL 457
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 141/335 (42%), Gaps = 39/335 (11%)
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N + L + G A V D I + P T+N +L C+ D + +++
Sbjct: 14 NVCLAALCRGGGIARAESVLVDAIRLGMPPDVVTYNTLLAAHCRASGLDAGFAVLHRMRE 73
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G P+ +TYN LI G + G A + E+ +G AP+A +Y +M C FR+ +
Sbjct: 74 AGVSPDAITYNSLIAGAARRGLTMRALDLFDEMLQAGVAPDAWSYNALMHCLFRSGHPED 133
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+ + M KG Y T++ + G A + G+ + IV+YNT+IN
Sbjct: 134 AYRVFADMAEKGVAPCATTYNTLLDGLFRFGHATNAYRMFRYLQRTGLPVGIVTYNTMIN 193
Query: 250 LYCKEGKLEAAYLLLDEMEK------------------------QGFEC----------- 274
CK GK+ A ++L E+ + QG E
Sbjct: 194 GLCKSGKVGYARMVLRELGRTEHAPNVVTYTTVMKCCFKYGRFDQGLETFLSLLEGGYIP 253
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
D + + +I L K G ++ A + E M + GF + YN ++ K+GK+D A +
Sbjct: 254 DLFPYCTVISALVKKGRMEEANTYSELMIRSGFRLDSACYNTLIYLRCKEGKLDDAFELL 313
Query: 335 ESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
ME D +T+S +V+ LCK +A K L
Sbjct: 314 SMMEEGGLESDEYTFSILVNGLCKMGHFEAAHKQL 348
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 4/237 (1%)
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
N+ + LC+ G + A +L + G P+ +TY T++ R G +L M+
Sbjct: 14 NVCLAALCRGGGIARAESVLVDAIRLGMPPDVVTYNTLLAAHCRASGLDAGFAVLHRMRE 73
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
G + D Y ++IA + G A D ++M+ GV D SYN L++ + G E
Sbjct: 74 AGVSPDAITYNSLIAGAARRGLTMRALDLFDEMLQAGVAPDAWSYNALMHCLFRSGHPED 133
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
AY + +M ++G T+ L+DGL + G+ A Y+ + G + YN +++
Sbjct: 134 AYRVFADMAEKGVAPCATTYNTLLDGLFRFGHATNAYRMFRYLQRTGLPVGIVTYNTMIN 193
Query: 320 RLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
L K GK+ +A V + + TY++++ K R + LS L+ G
Sbjct: 194 GLCKSGKVGYARMVLRELGRTEHAPNVVTYTTVMKCCFKYGRFDQGLETFLSLLEGG 250
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 67/159 (42%), Gaps = 4/159 (2%)
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
QL N + C+ G + A +L + + G D T+ L+ C+A +
Sbjct: 6 TQLSTRLMNVCLAALCRGGGIARAESVLVDAIRLGMPPDVVTYNTLLAAHCRASGLDAGF 65
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNL 352
L M + G + YN ++ + G A+++F+ M D+++Y++++H L
Sbjct: 66 AVLHRMREAGVSPDAITYNSLIAGAARRGLTMRALDLFDEMLQAGVAPDAWSYNALMHCL 125
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
++ A ++ + GV + ++DGL G
Sbjct: 126 FRSGHPEDAYRVFADMAEKGVAPCATTYNTLLDGLFRFG 164
>gi|293334951|ref|NP_001170632.1| uncharacterized protein LOC100384682 [Zea mays]
gi|238006488|gb|ACR34279.1| unknown [Zea mays]
gi|413925463|gb|AFW65395.1| hypothetical protein ZEAMMB73_565010 [Zea mays]
Length = 462
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/407 (49%), Positives = 276/407 (67%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ AYC+ DAG +++RMREAG+ PD VTYNSLI GA R+ L +LDL DEML G
Sbjct: 53 LLAAYCRVDGLDAGLAVVHRMREAGVRPDAVTYNSLITGADRSGLTVRALDLFDEMLRSG 112
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD WSYN+LMHCLF+ G P+ A RVF DM + PC T+N +L+GL K + NA
Sbjct: 113 VAPDSWSYNALMHCLFRSGHPEHAYRVFADMADRGVAPCATTYNTLLDGLLKAGHVTNAF 172
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
RMFR LQ+ G +VTYN +I GLCK+G++ AR +LKELG + HAPNA+TYTT+MKCC
Sbjct: 173 RMFRYLQRAGLPVGIVTYNTMINGLCKSGKVGYARMVLKELGRTEHAPNAVTYTTVMKCC 232
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
FR +++ GLE ++ GY D F Y TVI+A VK GR++EA Y E M+ G LD
Sbjct: 233 FRYGRFEQGLETFLSLLEGGYISDAFPYTTVISALVKKGRMQEANTYCELMIQSGSTLDN 292
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
YNTLI+L C+EGK+ A+ LL+ ME+ G E D+YT +IL++GLCK G I+ A +
Sbjct: 293 ACYNTLIHLRCQEGKINDAFELLNMMEEGGLESDEYTFSILVNGLCKMGQIEAAEKQIWS 352
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSA 361
M +G SN+ AYNC++D L K ++D AI + SM++KD F+Y+S+VH LCK R A
Sbjct: 353 MEMMGMQSNVVAYNCLIDALCKCHEVDAAIKILHSMKLKDDFSYTSLVHGLCKVGRYHMA 412
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
SK L CL G +L SA++AV+ GLR +G + + +K++S + MA++
Sbjct: 413 SKFLRICLHEGNNVLASAKRAVISGLRSAGFKNDLRKVRSALYMARL 459
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 129/282 (45%), Gaps = 4/282 (1%)
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
G L T N+ L LC+ + D A + + G P++VTYN L+ C+ L
Sbjct: 6 GHLALSTRLMNVGLASLCRGGWLDRAESVLVDAIRLGLPPDVVTYNTLLAAYCRVDGLDA 65
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
++ + ++G P+A+TY +++ R+ L++ M R G D + Y ++
Sbjct: 66 GLAVVHRMREAGVRPDAVTYNSLITGADRSGLTVRALDLFDEMLRSGVAPDSWSYNALMH 125
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
+ G + A M GV +YNTL++ K G + A+ + +++ G
Sbjct: 126 CLFRSGHPEHAYRVFADMADRGVAPCATTYNTLLDGLLKAGHVTNAFRMFRYLQRAGLPV 185
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
T+ +I+GLCK+G + AR+ L+ + + N Y ++ + G+ + + F
Sbjct: 186 GIVTYNTMINGLCKSGKVGYARMVLKELGRTEHAPNAVTYTTVMKCCFRYGRFEQGLETF 245
Query: 335 ESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
S+ + D+F Y++++ L K R+ A+ ++SG
Sbjct: 246 LSLLEGGYISDAFPYTTVISALVKKGRMQEANTYCELMIQSG 287
>gi|357159753|ref|XP_003578548.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Brachypodium distachyon]
Length = 460
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/407 (50%), Positives = 278/407 (68%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A+C+ DAG+ +L RMREAG+ P+ VTYNSLI A+R L +LDL DEML G
Sbjct: 51 LLAAHCRAAGLDAGFAVLRRMREAGVWPNAVTYNSLIVAASRVGLTMRALDLFDEMLRAG 110
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD WSYN LMHCLF+ G P++A RVF DM +TPCT T+N +L+GL K + NA
Sbjct: 111 IAPDAWSYNVLMHCLFRSGHPEDAYRVFADMAEKGVTPCTTTYNTLLDGLFKAGHATNAY 170
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
RMFR LQ+ G +VTYN +I GLC++G++ AR IL+ELG + H PNA+TYTT+MKCC
Sbjct: 171 RMFRYLQRVGLPVGIVTYNTMINGLCRSGKVGYARMILRELGRTEHTPNAVTYTTVMKCC 230
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
FR ++ GLE ++ G+ D F YCTVI+A VK GR++EA Y E M+ G +LD
Sbjct: 231 FRYGRFDQGLETFLSLLEGGHIPDVFPYCTVISALVKKGRVEEANAYSELMIQSGSRLDT 290
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
YNTLI+L C+EGKL+ A+ LL ME+ G E D+YT +IL++GLCK G+I+ A L Y
Sbjct: 291 ACYNTLIHLRCQEGKLDDAFELLSMMEEGGLESDEYTFSILVNGLCKLGHIEAAEKQLCY 350
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSA 361
M +SN+ AYNC+VD L K ++D AI + M++KD FTY+S+VH LC+ R A
Sbjct: 351 MEMRDMESNVVAYNCLVDALCKSDQVDAAIRLLHDMKLKDDFTYTSLVHGLCRVGRYHMA 410
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
SK L CL+ G +L SA++AV+ GLR +G + + +K++S + MA++
Sbjct: 411 SKFLRICLREGNNVLASAKRAVIAGLRSAGFKNDVRKVRSALYMARL 457
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 112/237 (47%), Gaps = 4/237 (1%)
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
N+ + LC++G L A +L + G P+ +TY T++ R G +L M+
Sbjct: 14 NVCLAALCRSGSLERAESVLIDAILLGMPPDVVTYNTLLAAHCRAAGLDAGFAVLRRMRE 73
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
G + Y ++I A ++G A D ++M+ G+ D SYN L++ + G E
Sbjct: 74 AGVWPNAVTYNSLIVAASRVGLTMRALDLFDEMLRAGIAPDAWSYNVLMHCLFRSGHPED 133
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
AY + +M ++G T+ L+DGL KAG+ A Y+ ++G + YN +++
Sbjct: 134 AYRVFADMAEKGVTPCTTTYNTLLDGLFKAGHATNAYRMFRYLQRVGLPVGIVTYNTMIN 193
Query: 320 RLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
L + GK+ +A + + ++ TY++++ + R + LS L+ G
Sbjct: 194 GLCRSGKVGYARMILRELGRTEHTPNAVTYTTVMKCCFRYGRFDQGLETFLSLLEGG 250
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 67/158 (42%), Gaps = 4/158 (2%)
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
QL N + C+ G LE A +L + G D T+ L+ C+A +
Sbjct: 7 QLSTRLMNVCLAALCRSGSLERAESVLIDAILLGMPPDVVTYNTLLAAHCRAAGLDAGFA 66
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 353
L M + G N YN ++ + G A+++F+ M D+++Y+ ++H L
Sbjct: 67 VLRRMREAGVWPNAVTYNSLIVAASRVGLTMRALDLFDEMLRAGIAPDAWSYNVLMHCLF 126
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
++ A ++ + GV + ++DGL +G
Sbjct: 127 RSGHPEDAYRVFADMAEKGVTPCTTTYNTLLDGLFKAG 164
>gi|242070261|ref|XP_002450407.1| hypothetical protein SORBIDRAFT_05g004830 [Sorghum bicolor]
gi|241936250|gb|EES09395.1| hypothetical protein SORBIDRAFT_05g004830 [Sorghum bicolor]
Length = 462
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/407 (49%), Positives = 275/407 (67%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A+C+ DAG +++RMREAG+ PD VTYNSLI GA R+ L +LDL DEML G
Sbjct: 53 LLAAHCRVAGLDAGIAVVHRMREAGVRPDAVTYNSLITGADRSGLTVRALDLFDEMLRSG 112
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD WSYN+LMHCLF+ G P+ A RVF DM + PC T+N +L+GL K + NA
Sbjct: 113 VAPDSWSYNALMHCLFRSGHPEHAYRVFADMADKGVAPCATTYNTLLDGLFKAGHATNAY 172
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
RMFR LQ+ G +VTYN +I GLCK+G++ AR +LKELG + HAPNA+TYTT+MKCC
Sbjct: 173 RMFRYLQRAGLPVGIVTYNTMINGLCKSGKVGYARMVLKELGRTEHAPNAVTYTTVMKCC 232
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
FR +++ GLE ++ GY D F Y TVI+A VK GR++EA Y E M+ G LD
Sbjct: 233 FRYGRFEQGLETFLSLLEGGYISDAFPYTTVISALVKKGRMQEANTYCELMIQSGSTLDN 292
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
YNTLI+L C+EGK++ A+ LL+ ME+ G E D+YT +IL++GLCK G I+ A +
Sbjct: 293 ACYNTLIHLRCQEGKIDDAFELLNMMEEGGLESDEYTFSILVNGLCKMGQIEAAEKQIWS 352
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSA 361
M + SN+ AYNC++D L K ++D AI + SM +KD FTY+S+VH LCK R A
Sbjct: 353 MEMMDMQSNVVAYNCLIDALCKCHEVDAAIKILHSMRLKDDFTYTSLVHGLCKVGRYHMA 412
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
SK L CL G +L SA++AV+ GLR +G + + +K++S + MA++
Sbjct: 413 SKFLRICLHEGNNVLASAKRAVISGLRSAGFKNDLRKVRSALYMARL 459
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 127/282 (45%), Gaps = 4/282 (1%)
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
L T N+ L LC+ + D A + + G P++VTYN L+ C+ L
Sbjct: 6 AQLALSTRLMNVGLAALCRGGWLDRAESVVVDAIRLGLPPDVVTYNTLLAAHCRVAGLDA 65
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
++ + ++G P+A+TY +++ R+ L++ M R G D + Y ++
Sbjct: 66 GIAVVHRMREAGVRPDAVTYNSLITGADRSGLTVRALDLFDEMLRSGVAPDSWSYNALMH 125
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
+ G + A M GV +YNTL++ K G AY + +++ G
Sbjct: 126 CLFRSGHPEHAYRVFADMADKGVAPCATTYNTLLDGLFKAGHATNAYRMFRYLQRAGLPV 185
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
T+ +I+GLCK+G + AR+ L+ + + N Y ++ + G+ + + F
Sbjct: 186 GIVTYNTMINGLCKSGKVGYARMVLKELGRTEHAPNAVTYTTVMKCCFRYGRFEQGLETF 245
Query: 335 ESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
S+ + D+F Y++++ L K R+ A+ ++SG
Sbjct: 246 LSLLEGGYISDAFPYTTVISALVKKGRMQEANTYCELMIQSG 287
>gi|47497141|dbj|BAD19190.1| zinc finger (CCCH-type) protein-like [Oryza sativa Japonica Group]
gi|47497588|dbj|BAD19658.1| zinc finger (CCCH-type) protein-like [Oryza sativa Japonica Group]
Length = 462
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 275/407 (67%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A+C+ +AG ++ RMREAG+ PD VTYNSLIAGA R L +LDL DEML G
Sbjct: 53 LLAAHCRAAGLEAGLVVMGRMREAGVEPDAVTYNSLIAGAARRGLPIHALDLFDEMLRSG 112
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD WSYN LMHCLF+ G P++A RVF DM + PC T+N +L+G+ + Y NA
Sbjct: 113 IAPDSWSYNPLMHCLFRSGHPEDAYRVFADMAEKGIAPCDTTYNTLLDGMFRAGYAMNAY 172
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
RMFR LQ+ G +VTYN +I GLC +G++ AR +L+ELG + HAPN ITYT +MKCC
Sbjct: 173 RMFRYLQRAGLPVSIVTYNTMINGLCSSGKVGYARMVLRELGRTDHAPNIITYTAVMKCC 232
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ +++ GL+ ++ +GY D + YCTVI+A VK GRL EA +Y + M+ +G +LD
Sbjct: 233 FKYGRFEQGLDTFLSLLDRGYISDVYPYCTVISALVKKGRLGEANNYCDLMLQNGSRLDS 292
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V YNTLI++ C+EGKL+ A+ L+ ME G E D+YT IL++GLCK G+I+ A L Y
Sbjct: 293 VCYNTLIHMRCQEGKLDDAFELVSMMEDGGLESDEYTFAILVNGLCKMGHIEAAEKQLFY 352
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSA 361
M G SN+ AYNC+VD L K ++D AI + + M++KD FTY+S+VH LC+ R A
Sbjct: 353 MEIKGMQSNVVAYNCLVDALCKFQEVDAAIRLLQCMKLKDDFTYTSLVHGLCRVGRYHMA 412
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
SK L CL G +L SA++AV+ GLR SG + + +K++ + MAK+
Sbjct: 413 SKFLRICLHEGNNVLASAKRAVIAGLRSSGFKNDLRKVRVALNMAKL 459
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 148/357 (41%), Gaps = 39/357 (10%)
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N + L + G A V D I L P T+N +L C+ + L + +++
Sbjct: 16 NVCLAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGLEAGLVVMGRMRE 75
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G P+ VTYN LI G + G A + E+ SG AP++ +Y +M C FR+ +
Sbjct: 76 AGVEPDAVTYNSLIAGAARRGLPIHALDLFDEMLRSGIAPDSWSYNPLMHCLFRSGHPED 135
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+ + M KG Y T++ + G A + G+ + IV+YNT+IN
Sbjct: 136 AYRVFADMAEKGIAPCDTTYNTLLDGMFRAGYAMNAYRMFRYLQRAGLPVSIVTYNTMIN 195
Query: 250 LYCKEGKLEAAYLLLDEMEK-----------------------------------QGFEC 274
C GK+ A ++L E+ + +G+
Sbjct: 196 GLCSSGKVGYARMVLRELGRTDHAPNIITYTAVMKCCFKYGRFEQGLDTFLSLLDRGYIS 255
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
D Y + +I L K G + A + + M + G + YN ++ ++GK+D A +
Sbjct: 256 DVYPYCTVISALVKKGRLGEANNYCDLMLQNGSRLDSVCYNTLIHMRCQEGKLDDAFELV 315
Query: 335 ESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
ME D +T++ +V+ LCK + +A K L G++ A +VD L
Sbjct: 316 SMMEDGGLESDEYTFAILVNGLCKMGHIEAAEKQLFYMEIKGMQSNVVAYNCLVDAL 372
>gi|115449175|ref|NP_001048367.1| Os02g0793200 [Oryza sativa Japonica Group]
gi|113537898|dbj|BAF10281.1| Os02g0793200 [Oryza sativa Japonica Group]
gi|215704904|dbj|BAG94932.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 473
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 275/407 (67%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A+C+ +AG ++ RMREAG+ PD VTYNSLIAGA R L +LDL DEML G
Sbjct: 64 LLAAHCRAAGLEAGLVVMGRMREAGVEPDAVTYNSLIAGAARRGLPIHALDLFDEMLRSG 123
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD WSYN LMHCLF+ G P++A RVF DM + PC T+N +L+G+ + Y NA
Sbjct: 124 IAPDSWSYNPLMHCLFRSGHPEDAYRVFADMAEKGIAPCDTTYNTLLDGMFRAGYAMNAY 183
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
RMFR LQ+ G +VTYN +I GLC +G++ AR +L+ELG + HAPN ITYT +MKCC
Sbjct: 184 RMFRYLQRAGLPVSIVTYNTMINGLCSSGKVGYARMVLRELGRTDHAPNIITYTAVMKCC 243
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ +++ GL+ ++ +GY D + YCTVI+A VK GRL EA +Y + M+ +G +LD
Sbjct: 244 FKYGRFEQGLDTFLSLLDRGYISDVYPYCTVISALVKKGRLGEANNYCDLMLQNGSRLDS 303
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V YNTLI++ C+EGKL+ A+ L+ ME G E D+YT IL++GLCK G+I+ A L Y
Sbjct: 304 VCYNTLIHMRCQEGKLDDAFELVSMMEDGGLESDEYTFAILVNGLCKMGHIEAAEKQLFY 363
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSA 361
M G SN+ AYNC+VD L K ++D AI + + M++KD FTY+S+VH LC+ R A
Sbjct: 364 MEIKGMQSNVVAYNCLVDALCKFQEVDAAIRLLQCMKLKDDFTYTSLVHGLCRVGRYHMA 423
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
SK L CL G +L SA++AV+ GLR SG + + +K++ + MAK+
Sbjct: 424 SKFLRICLHEGNNVLASAKRAVIAGLRSSGFKNDLRKVRVALNMAKL 470
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 148/357 (41%), Gaps = 39/357 (10%)
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N + L + G A V D I L P T+N +L C+ + L + +++
Sbjct: 27 NVCLAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGLEAGLVVMGRMRE 86
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G P+ VTYN LI G + G A + E+ SG AP++ +Y +M C FR+ +
Sbjct: 87 AGVEPDAVTYNSLIAGAARRGLPIHALDLFDEMLRSGIAPDSWSYNPLMHCLFRSGHPED 146
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+ + M KG Y T++ + G A + G+ + IV+YNT+IN
Sbjct: 147 AYRVFADMAEKGIAPCDTTYNTLLDGMFRAGYAMNAYRMFRYLQRAGLPVSIVTYNTMIN 206
Query: 250 LYCKEGKLEAAYLLLDEMEK-----------------------------------QGFEC 274
C GK+ A ++L E+ + +G+
Sbjct: 207 GLCSSGKVGYARMVLRELGRTDHAPNIITYTAVMKCCFKYGRFEQGLDTFLSLLDRGYIS 266
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
D Y + +I L K G + A + + M + G + YN ++ ++GK+D A +
Sbjct: 267 DVYPYCTVISALVKKGRLGEANNYCDLMLQNGSRLDSVCYNTLIHMRCQEGKLDDAFELV 326
Query: 335 ESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
ME D +T++ +V+ LCK + +A K L G++ A +VD L
Sbjct: 327 SMMEDGGLESDEYTFAILVNGLCKMGHIEAAEKQLFYMEIKGMQSNVVAYNCLVDAL 383
>gi|125541439|gb|EAY87834.1| hypothetical protein OsI_09254 [Oryza sativa Indica Group]
Length = 502
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/410 (49%), Positives = 277/410 (67%), Gaps = 1/410 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A+C+ +AG ++ RMREAG+ PD VTYNSLIAGA R L +LDL DEML G
Sbjct: 53 LLAAHCRAAGLEAGLAVMGRMREAGVEPDAVTYNSLIAGAARRGLPIHALDLFDEMLRAG 112
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD WSYN LMHCLF+ G P++A RVF DM + PC T+N +L+G+ + Y NA
Sbjct: 113 IAPDSWSYNPLMHCLFRSGHPEDAYRVFADMAEKGIAPCDTTYNTLLDGMFRAGYAMNAY 172
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
RMFR LQ+ G +VTYN +I GLC +G++ AR +L+ELG + HAPN ITYT +MKCC
Sbjct: 173 RMFRYLQRAGLPVSIVTYNTMINGLCSSGKVGYARMVLRELGRTDHAPNIITYTAVMKCC 232
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ +++ GL+ ++ +GY D + YCTVI+A VK GRL EA +Y + M+ +G +LD
Sbjct: 233 FKYGRFEQGLDTFLSLLDRGYISDVYPYCTVISALVKKGRLGEANNYCDLMLQNGSRLDS 292
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V YNTLI++ C+EGKL+ A+ L+ ME G E D+YT IL++GLCK G+I+ A L Y
Sbjct: 293 VCYNTLIHMRCQEGKLDDAFELVSMMEDGGLESDEYTFAILVNGLCKMGHIEAAEKQLFY 352
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSA 361
M G SN+ AYNC+VD L K ++D AI + + M++KD FTY+S+VH LC+ R A
Sbjct: 353 MEIKGMQSNVVAYNCLVDALCKFQEVDAAIRLLQCMKLKDDFTYTSLVHGLCRVGRYHMA 412
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS-KIRMAKISH 410
SK L CL+ G +L SA++AV+ GLR SG + + +K++S K + KI H
Sbjct: 413 SKFLRICLREGNNVLASAKRAVIAGLRSSGFKNDLRKVRSVKPKRNKIKH 462
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 148/357 (41%), Gaps = 39/357 (10%)
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N + L + G A V D I L P T+N +L C+ + L + +++
Sbjct: 16 NVCLAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGLEAGLAVMGRMRE 75
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G P+ VTYN LI G + G A + E+ +G AP++ +Y +M C FR+ +
Sbjct: 76 AGVEPDAVTYNSLIAGAARRGLPIHALDLFDEMLRAGIAPDSWSYNPLMHCLFRSGHPED 135
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+ + M KG Y T++ + G A + G+ + IV+YNT+IN
Sbjct: 136 AYRVFADMAEKGIAPCDTTYNTLLDGMFRAGYAMNAYRMFRYLQRAGLPVSIVTYNTMIN 195
Query: 250 LYCKEGKLEAAYLLLDEMEK-----------------------------------QGFEC 274
C GK+ A ++L E+ + +G+
Sbjct: 196 GLCSSGKVGYARMVLRELGRTDHAPNIITYTAVMKCCFKYGRFEQGLDTFLSLLDRGYIS 255
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
D Y + +I L K G + A + + M + G + YN ++ ++GK+D A +
Sbjct: 256 DVYPYCTVISALVKKGRLGEANNYCDLMLQNGSRLDSVCYNTLIHMRCQEGKLDDAFELV 315
Query: 335 ESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
ME D +T++ +V+ LCK + +A K L G++ A +VD L
Sbjct: 316 SMMEDGGLESDEYTFAILVNGLCKMGHIEAAEKQLFYMEIKGMQSNVVAYNCLVDAL 372
>gi|297794571|ref|XP_002865170.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311005|gb|EFH41429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 468
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 280/407 (68%), Gaps = 3/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI Y +F+ D Y + RMREAGI PDV TYNSLI+GA +N +L+ L L DEML G
Sbjct: 54 LIKGYSRFIGIDEAYAVTRRMREAGIEPDVATYNSLISGAAKNLMLNRVLQLFDEMLHSG 113
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVF-QDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+WSYN+LM C F+LGK EA R+ +D+ L P T+NI+L+ LCK+ +TDNA
Sbjct: 114 LSPDMWSYNTLMSCYFRLGKHGEAFRILHEDIRLAGLVPGVDTYNILLDALCKSGHTDNA 173
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +F+ L K PEL+TYNILI GLCK+ R+ + W+L+EL +G+ PNA+TYTT++K
Sbjct: 174 IELFKHL-KSRVKPELMTYNILINGLCKSRRVGSVNWMLRELRKAGYTPNAVTYTTMLKM 232
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ-L 239
F+ ++ + GLE+ MK++GYTFDG+ C V++A +K GR +EA M ++V G +
Sbjct: 233 YFKTKRIEKGLELFLKMKKEGYTFDGYANCAVVSALIKTGRAEEAYGCMNELVRSGTRSQ 292
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DIVSYNTL+N+Y K+G L+A LL+E+E +G + D YTHTI+++GL K G+ GA HL
Sbjct: 293 DIVSYNTLLNMYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLKIGHTGGAEKHL 352
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLP 359
+ ++G ++ NC++D L K G +D A+ +F SMEV+D FTY+S+VHNLCK RL
Sbjct: 353 ARIGEMGMQPSIATCNCLIDGLCKAGHVDRAMRLFASMEVRDEFTYTSVVHNLCKDGRLV 412
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
ASKLLLSC G++I SA++AV+ GLR + + A+K KI+ A
Sbjct: 413 CASKLLLSCYNKGMKIPSSARRAVLSGLRETVSHQAARKTHFKIKAA 459
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 134/280 (47%), Gaps = 8/280 (2%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
T NI ++ LCK R + A + + G +P+++TYN LIKG + + A + +
Sbjct: 13 TKLLNISVDSLCKFRNLEKAETLLIDGIRLGVLPDVITYNTLIKGYSRFIGIDEAYAVTR 72
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
+ ++G P+ TY +++ +N L++ M G + D + Y T+++ + ++G
Sbjct: 73 RMREAGIEPDVATYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFRLG 132
Query: 221 RLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
+ EA + E + G+ + +YN L++ CK G + A L + K + + T+
Sbjct: 133 KHGEAFRILHEDIRLAGLVPGVDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELMTY 191
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
ILI+GLCK+ + L + K G+ N Y ++ K +I+ + +F M+
Sbjct: 192 NILINGLCKSRRVGSVNWMLRELRKAGYTPNAVTYTTMLKMYFKTKRIEKGLELFLKMK- 250
Query: 340 KDSFTYS-----SMVHNLCKAKRLPSASKLLLSCLKSGVR 374
K+ +T+ ++V L K R A + ++SG R
Sbjct: 251 KEGYTFDGYANCAVVSALIKTGRAEEAYGCMNELVRSGTR 290
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 152/349 (43%), Gaps = 40/349 (11%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
++A + D I + P T+N ++ G + D A + R +++ G P++ TYN L
Sbjct: 30 EKAETLLIDGIRLGVLPDVITYNTLIKGYSRFIGIDEAYAVTRRMREAGIEPDVATYNSL 89
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI--------- 193
I G K L + E+ SG +P+ +Y T+M C FR K+ I
Sbjct: 90 ISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFRLGKHGEAFRILHEDIRLAG 149
Query: 194 -----------LSAMKRKGYTFDGF---------------GYCTVIAAFVKIGRLKEATD 227
L A+ + G+T + Y +I K R+
Sbjct: 150 LVPGVDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVNW 209
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
+ ++ G + V+Y T++ +Y K ++E L +M+K+G+ D Y + ++ L
Sbjct: 210 MLRELRKAGYTPNAVTYTTMLKMYFKTKRIEKGLELFLKMKKEGYTFDGYANCAVVSALI 269
Query: 288 KAGNIKGARLHLEYMNKIGFDS-NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
K G + A + + + G S ++ +YN +++ KDG +D ++ E +E+K D
Sbjct: 270 KTGRAEEAYGCMNELVRSGTRSQDIVSYNTLLNMYFKDGNLDAVDDLLEEIEMKGLKPDD 329
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+T++ +V+ L K A K L + G++ + ++DGL +G
Sbjct: 330 YTHTIIVNGLLKIGHTGGAEKHLARIGEMGMQPSIATCNCLIDGLCKAG 378
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 110/240 (45%), Gaps = 5/240 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ + +L +R+AG +P+ VTY +++ + + L+L +M +
Sbjct: 193 ILINGLCKSRRVGSVNWMLRELRKAGYTPNAVTYTTMLKMYFKTKRIEKGLELFLKMKKE 252
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDN 119
G D ++ +++ L + G+ +EA +++ G + ++N +LN K+ D
Sbjct: 253 GYTFDGYANCAVVSALIKTGRAEEAYGCMNELVRSGTRSQDIVSYNTLLNMYFKDGNLDA 312
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+ ++ G P+ T+ I++ GL K G A L +G+ G P+ T ++
Sbjct: 313 VDDLLEEIEMKGLKPDDYTHTIIVNGLLKIGHTGGAEKHLARIGEMGMQPSIATCNCLID 372
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + + ++M+ + D F Y +V+ K GRL A+ + G+++
Sbjct: 373 GLCKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKI 428
>gi|18422700|ref|NP_568665.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635755|sp|Q56XR6.2|PP421_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46680
gi|332008030|gb|AED95413.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 468
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 280/407 (68%), Gaps = 3/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI Y +F+ D Y + RMREAGI PDV TYNSLI+GA +N +L+ L L DEML G
Sbjct: 54 LIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSG 113
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVF-QDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+WSYN+LM C F+LG+ EA ++ +D+ L P T+NI+L+ LCK+ +TDNA
Sbjct: 114 LSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNA 173
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +F+ L K PEL+TYNILI GLCK+ R+ + W+++EL SG+ PNA+TYTT++K
Sbjct: 174 IELFKHL-KSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKM 232
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ-L 239
F+ ++ + GL++ MK++GYTFDGF C V++A +K GR +EA + M ++V G +
Sbjct: 233 YFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQ 292
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DIVSYNTL+NLY K+G L+A LL+E+E +G + D YTHTI+++GL GN GA HL
Sbjct: 293 DIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHL 352
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLP 359
+ ++G ++ NC++D L K G +D A+ +F SMEV+D FTY+S+VHNLCK RL
Sbjct: 353 ACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVRDEFTYTSVVHNLCKDGRLV 412
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
ASKLLLSC G++I SA++AV+ G+R + + A+K KI+ A
Sbjct: 413 CASKLLLSCYNKGMKIPSSARRAVLSGIRETVSYQAARKTHIKIKAA 459
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 6/279 (2%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
T NI +N LCK R + A + + G +P+++TYN LIKG + + A + +
Sbjct: 13 TKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTR 72
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
+ ++G P+ TY +++ +N L++ M G + D + Y T+++ + K+G
Sbjct: 73 RMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLG 132
Query: 221 RLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
R EA + E + G+ I +YN L++ CK G + A L + K + + T+
Sbjct: 133 RHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELMTY 191
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
ILI+GLCK+ + + + K G+ N Y ++ K +I+ + +F M+
Sbjct: 192 NILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKK 251
Query: 340 K----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
+ D F ++V L K R A + + ++SG R
Sbjct: 252 EGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTR 290
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 157/364 (43%), Gaps = 44/364 (12%)
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
S NSL C F+ + A + D I + P T+N ++ G + D A + R +
Sbjct: 19 SVNSL--CKFR--NLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRM 74
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
++ G P++ TYN LI G K L + E+ SG +P+ +Y T+M C F+ ++
Sbjct: 75 REAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRH 134
Query: 188 KLGLEI--------------------LSAMKRKGYTFDGF---------------GYCTV 212
+I L A+ + G+T + Y +
Sbjct: 135 GEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNIL 194
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I K R+ M ++ G + V+Y T++ +Y K ++E L +M+K+G+
Sbjct: 195 INGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGY 254
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS-NLEAYNCIVDRLGKDGKIDHAI 331
D + + ++ L K G + A + + + G S ++ +YN +++ KDG +D
Sbjct: 255 TFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVD 314
Query: 332 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
++ E +E+K D +T++ +V+ L A K L + G++ ++DGL
Sbjct: 315 DLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGL 374
Query: 388 RHSG 391
+G
Sbjct: 375 CKAG 378
>gi|21618238|gb|AAM67288.1| unknown [Arabidopsis thaliana]
Length = 463
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 280/407 (68%), Gaps = 3/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI Y +F+ D Y + RMREAGI PDV TYNSLI+GA +N +L+ L L DEML G
Sbjct: 49 LIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSG 108
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVF-QDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+WSYN+LM C F+LG+ EA ++ +D+ L P T+NI+L+ LCK+ +TDNA
Sbjct: 109 LSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNA 168
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +F+ L K PEL+TYNILI GLCK+ R+ + W+++EL SG+ PNA+TYTT++K
Sbjct: 169 IELFKHL-KSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKM 227
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ-L 239
F+ ++ + GL++ MK++GYTFDGF C V++A +K GR +EA + M ++V G +
Sbjct: 228 YFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQ 287
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DIVSYNTL+NLY K+G L+A LL+E+E +G + D YTHTI+++GL GN GA HL
Sbjct: 288 DIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHL 347
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLP 359
+ ++G ++ NC++D L K G +D A+ +F SMEV+D FTY+S+VHNLCK RL
Sbjct: 348 ACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVRDEFTYTSVVHNLCKDGRLV 407
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
ASKLLLSC G++I SA++AV+ G+R + + A+K KI+ A
Sbjct: 408 CASKLLLSCYNKGMKIPSSARRAVLSGIRETVSYQAARKTHIKIKAA 454
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 6/279 (2%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
T NI +N LCK R + A + + G +P+++TYN LIKG + + A + +
Sbjct: 8 TKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTR 67
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
+ ++G P+ TY +++ +N L++ M G + D + Y T+++ + K+G
Sbjct: 68 RMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLG 127
Query: 221 RLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
R EA + E + G+ I +YN L++ CK G + A L + K + + T+
Sbjct: 128 RHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELMTY 186
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
ILI+GLCK+ + + + K G+ N Y ++ K +I+ + +F M+
Sbjct: 187 NILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKK 246
Query: 340 K----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
+ D F ++V L K R A + + ++SG R
Sbjct: 247 EGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTR 285
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 157/364 (43%), Gaps = 44/364 (12%)
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
S NSL C F+ + A + D I + P T+N ++ G + D A + R +
Sbjct: 14 SVNSL--CKFR--NLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRM 69
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
++ G P++ TYN LI G K L + E+ SG +P+ +Y T+M C F+ ++
Sbjct: 70 REAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRH 129
Query: 188 KLGLEI--------------------LSAMKRKGYTFDGF---------------GYCTV 212
+I L A+ + G+T + Y +
Sbjct: 130 GEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNIL 189
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I K R+ M ++ G + V+Y T++ +Y K ++E L +M+K+G+
Sbjct: 190 INGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGY 249
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS-NLEAYNCIVDRLGKDGKIDHAI 331
D + + ++ L K G + A + + + G S ++ +YN +++ KDG +D
Sbjct: 250 TFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVD 309
Query: 332 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
++ E +E+K D +T++ +V+ L A K L + G++ ++DGL
Sbjct: 310 DLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGL 369
Query: 388 RHSG 391
+G
Sbjct: 370 CKAG 373
>gi|62320562|dbj|BAD95174.1| hypothetical protein [Arabidopsis thaliana]
Length = 468
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 280/407 (68%), Gaps = 3/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI Y +F+ D Y + RMREAGI PDV TYNSLI+GA +N +L+ L L DEML G
Sbjct: 54 LIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLVLNRVLQLFDEMLHSG 113
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVF-QDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+WSYN+LM C F+LG+ EA ++ +D+ L P T+NI+L+ LCK+ +TDNA
Sbjct: 114 LSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNA 173
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +F+ L K PEL+TYNILI GLCK+ R+ + W+++EL SG+ PNA+TYTT++K
Sbjct: 174 IELFKHL-KSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKM 232
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ-L 239
F+ ++ + GL++ MK++GYTFDGF C V++A +K GR +EA + M ++V G +
Sbjct: 233 YFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQ 292
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DIVSYNTL+NLY K+G L+A LL+E+E +G + D YTHTI+++GL GN GA HL
Sbjct: 293 DIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHL 352
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLP 359
+ ++G ++ NC++D L K G +D A+ +F SMEV+D FTY+S+VHNLCK RL
Sbjct: 353 ACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVRDEFTYTSVVHNLCKDGRLV 412
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
ASKLLLSC G++I SA++AV+ G+R + + A+K KI+ A
Sbjct: 413 CASKLLLSCYNKGMKIPSSARRAVLSGIRETVSYQAARKTHIKIKAA 459
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 6/279 (2%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
T NI +N LCK R + A + + G +P+++TYN LIKG + + A + +
Sbjct: 13 TKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTR 72
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
+ ++G P+ TY +++ +N L++ M G + D + Y T+++ + K+G
Sbjct: 73 RMREAGIEPDVTTYNSLISGAAKNLVLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLG 132
Query: 221 RLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
R EA + E + G+ I +YN L++ CK G + A L + K + + T+
Sbjct: 133 RHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELMTY 191
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
ILI+GLCK+ + + + K G+ N Y ++ K +I+ + +F M+
Sbjct: 192 NILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKK 251
Query: 340 K----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
+ D F ++V L K R A + + ++SG R
Sbjct: 252 EGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTR 290
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 157/364 (43%), Gaps = 44/364 (12%)
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
S NSL C F+ + A + D I + P T+N ++ G + D A + R +
Sbjct: 19 SVNSL--CKFR--NLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRM 74
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
++ G P++ TYN LI G K L + E+ SG +P+ +Y T+M C F+ ++
Sbjct: 75 REAGIEPDVTTYNSLISGAAKNLVLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRH 134
Query: 188 KLGLEI--------------------LSAMKRKGYTFDGF---------------GYCTV 212
+I L A+ + G+T + Y +
Sbjct: 135 GEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNIL 194
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I K R+ M ++ G + V+Y T++ +Y K ++E L +M+K+G+
Sbjct: 195 INGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGY 254
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS-NLEAYNCIVDRLGKDGKIDHAI 331
D + + ++ L K G + A + + + G S ++ +YN +++ KDG +D
Sbjct: 255 TFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVD 314
Query: 332 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
++ E +E+K D +T++ +V+ L A K L + G++ ++DGL
Sbjct: 315 DLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGL 374
Query: 388 RHSG 391
+G
Sbjct: 375 CKAG 378
>gi|2894600|emb|CAA17134.1| putative protein [Arabidopsis thaliana]
gi|7268543|emb|CAB78793.1| putative protein [Arabidopsis thaliana]
Length = 1208
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/408 (47%), Positives = 263/408 (64%), Gaps = 38/408 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI YC+FV + Y + RMR+AGI PDV TYNSLIAGA R +L L L DEMLE G
Sbjct: 54 LISGYCRFVGIEEAYAVTRRMRDAGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWG 113
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRV-FQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PD+WSYN+LM C F+LGK +EA RV ++D+ L P DNA
Sbjct: 114 IYPDLWSYNTLMCCYFKLGKHEEAFRVLYKDLQLAGLNP------------------DNA 155
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F+ +Q F PEL+TYNILI GLCK+ R+ TA+W+L EL SG+ PNA+TYTTI+K
Sbjct: 156 LELFKEMQSR-FKPELMTYNILINGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKL 214
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+ R+ + GL++ MKR+GYT+DG+ Y V++A +K GR KEA +YM+++V
Sbjct: 215 YFKTRRIRRGLQLFLEMKREGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVR------ 268
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
K+G L+A LL E+E++G + D+YTHTI+++GL + G + A H
Sbjct: 269 ------------KDGNLDAVDDLLGEIERRGMKADEYTHTIIVNGLLRTGQTRRAEEHFV 316
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPS 360
M ++G NL NC+VD L K G +D A+ FESMEVKD +TY+S+VHNLCK R
Sbjct: 317 SMGEMGIGLNLVTCNCLVDGLCKAGHVDRAMRYFESMEVKDEYTYTSVVHNLCKDMRFVC 376
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
ASKLLLSC G++I SA++AV+ GLR SGC EA+K ++++++ +
Sbjct: 377 ASKLLLSCYNKGIKIPTSARRAVLSGLRMSGCYGEARKAKAEMKLTLV 424
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 139/316 (43%), Gaps = 33/316 (10%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
T NI ++ LCK R + A + + G P++VTYN LI G C+ + A + +
Sbjct: 13 TRLLNICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVTR 72
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
+ D+G P+ TY +++ R L + M G D + Y T++ + K+G
Sbjct: 73 RMRDAGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFKLG 132
Query: 221 RLKEATDYM-EQMVTDGVQLD----------------IVSYNTLINLYCKEGKLEAAYLL 263
+ +EA + + + G+ D +++YN LIN CK ++ A +
Sbjct: 133 KHEEAFRVLYKDLQLAGLNPDNALELFKEMQSRFKPELMTYNILINGLCKSRRVGTAKWM 192
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
L E++K G+ + T+T ++ K I +G +L LE M + G+ + AY +V L
Sbjct: 193 LTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQLFLE-MKREGYTYDGYAYFAVVSALI 251
Query: 323 KDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
K G+ A + + KD L + LL + G++ +
Sbjct: 252 KTGRTKEAYEYMQELVRKDG--------------NLDAVDDLLGEIERRGMKADEYTHTI 297
Query: 383 VVDGLRHSGCRREAKK 398
+V+GL +G R A++
Sbjct: 298 IVNGLLRTGQTRRAEE 313
>gi|9758504|dbj|BAB08912.1| unnamed protein product [Arabidopsis thaliana]
Length = 431
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 176/405 (43%), Positives = 254/405 (62%), Gaps = 36/405 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI Y +F+ D Y + RMREAGI PDV TYNSLI+GA +N +L+ L L DEML G
Sbjct: 54 LIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSG 113
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+WSYN+LM C F+LG+ EA ++ + +I L G +TDNA+
Sbjct: 114 LSPDMWSYNTLMSCYFKLGRHGEAFKILHE-------------DIHLAG----GHTDNAI 156
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ L K PEL+TYNILI GLCK+ R+ + W+++EL SG+ PNA+TYTT++K
Sbjct: 157 ELFKHL-KSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMY 215
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ ++ + GL++ MK++GYTFDGF C V++A +K GR +EA + M ++V
Sbjct: 216 FKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRS------ 269
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+G L+A LL+E+E +G + D YTHTI+++GL GN GA HL
Sbjct: 270 ------------DGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLAC 317
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSA 361
+ ++G ++ NC++D L K G +D A+ +F SMEV+D FTY+S+VHNLCK RL A
Sbjct: 318 IGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVRDEFTYTSVVHNLCKDGRLVCA 377
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
SKLLLSC G++I SA++AV+ G+R + + A+K KI+ A
Sbjct: 378 SKLLLSCYNKGMKIPSSARRAVLSGIRETVSYQAARKTHIKIKAA 422
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 153/330 (46%), Gaps = 40/330 (12%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
T NI +N LCK R + A + + G +P+++TYN LIKG + + A + +
Sbjct: 13 TKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTR 72
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
+ ++G P+ TY +++ +N L++ M G + D + Y T+++ + K+G
Sbjct: 73 RMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLG 132
Query: 221 RLKEATDYMEQMV------TDG-----------VQLDIVSYNTLINLYCKEGKLEAAYLL 263
R EA + + + TD V+ ++++YN LIN CK ++ + +
Sbjct: 133 RHGEAFKILHEDIHLAGGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWM 192
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN------------ 310
+ E++K G+ + T+T ++ K I KG +L L+ M K G+ +
Sbjct: 193 MRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLK-MKKEGYTFDGFANCAVVSALI 251
Query: 311 -----LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSA 361
EAY C+ + + DG +D ++ E +E+K D +T++ +V+ L A
Sbjct: 252 KTGRAEEAYECMHELVRSDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGA 311
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
K L + G++ ++DGL +G
Sbjct: 312 EKHLACIGEMGMQPSVVTCNCLIDGLCKAG 341
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 224/417 (53%), Gaps = 9/417 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C+ D+ Y +L+RM+ G SPD+VTYN LI +L +L+ +++L+
Sbjct: 132 IITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKEN 191
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y L+ G DEA ++ +M+ +L P T+N ++ G+C+ Y D A
Sbjct: 192 CKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAF 251
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + G+ P+++TYNIL++GL G+ ++ ++ G N +TY+ ++
Sbjct: 252 QIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSV 311
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ K + G+ +L MK+KG DG+ Y +IAA K GR+ A + ++ M++DG DI
Sbjct: 312 CRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDI 371
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHLE 300
V+YNT++ CK+ + + A + +++ + G + ++ + L G+ ++ + LE
Sbjct: 372 VNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILE 431
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS------FTYSSMVHNLCK 354
++K G D + YN ++ L +DG +D AI + ME++ S +Y+ ++ LCK
Sbjct: 432 MLDK-GVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCK 490
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK-IRMAKISH 410
R+ A ++L + + G R ++ +++G+ GC +A+ + + + M IS
Sbjct: 491 VSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAISE 547
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 170/359 (47%), Gaps = 5/359 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+A D +L+ M E + PD+ TYNS+I G R + + ++ +
Sbjct: 201 ILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSK 260
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +YN L+ L GK + + DM+ T++++++ +C++ +
Sbjct: 261 GYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEG 320
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + ++K G P+ Y+ LI LCK GR+ A +L + G P+ + Y TI+ C
Sbjct: 321 VGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILAC 380
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ L I + G + + Y ++ +A G A + +M+ GV D
Sbjct: 381 LCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPD 440
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK--YTHTILIDGLCKAGNIKGARLH 298
++YN+LI+ C++G ++ A LL +ME + EC ++ I++ GLCK + A
Sbjct: 441 GITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEV 500
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV---FESMEVKDSFTYSSMVHNLCK 354
L M G N Y +++ +G G ++ A ++ +M+ ++ + CK
Sbjct: 501 LAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAISEHSFERLYKTFCK 559
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 164/351 (46%), Gaps = 5/351 (1%)
Query: 50 SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 109
SL L ++ G PDV L+H LF D+A +V ++ P +N ++
Sbjct: 76 SLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMH-ILENHGHPDLIAYNAIIT 134
Query: 110 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 169
G C+ D+A ++ ++ GF P++VTYNILI LC G L +A +L P
Sbjct: 135 GFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKP 194
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
+TYT +++ +++L M D F Y ++I + G + A +
Sbjct: 195 TVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQII 254
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
+ + G D+++YN L+ +GK EA Y L+ +M +G E + T+++LI +C+
Sbjct: 255 SSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRD 314
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 345
G ++ L+ M K G + Y+ ++ L K+G++D AI V + M V D Y
Sbjct: 315 GKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNY 374
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
++++ LCK KR A + + G S+ ++ L +G + A
Sbjct: 375 NTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRA 425
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 109/230 (47%), Gaps = 5/230 (2%)
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CKAG + + L+ L + GH P+ + T ++ F ++ ++++ ++ G+ D
Sbjct: 68 CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGHP-DL 126
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I F + R+ A +++M G DIV+YN LI C G L++A ++
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
+ K+ + T+TILI+ G I A L+ M +I ++ YN I+ + ++G
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
+D A + S+ K D TY+ ++ L + + +L+ + G
Sbjct: 247 VDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARG 296
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 129/403 (32%), Positives = 207/403 (51%), Gaps = 10/403 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI CQ D Y +L+ M + PD YN LIAG + + + ++L MLE
Sbjct: 97 ILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLER 156
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV +Y SL+ Q DEA ++ + M LTP T +N +LNGLCK +
Sbjct: 157 SCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEV 216
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + + G P+ +YN ++ LC++G+ A IL+++ + P+ +TY ++M
Sbjct: 217 SKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDG 276
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K +L M + Y T+I F + RL +A ME M G+ D
Sbjct: 277 FCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPD 336
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YN L++ CK GKLE A+ LL+ M ++ D T++IL++GLCK G + ARL LE
Sbjct: 337 LVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLE 396
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + G NL +N ++D K GK+D V E M+ D TYS+++ CKA
Sbjct: 397 MMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKAN 456
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
R+ A +L G+ K++ ++++GL +G EA+++
Sbjct: 457 RMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEV 493
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 209/419 (49%), Gaps = 33/419 (7%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI CQ + D ++ +M+E+G++PD V YN+L+ G + + L LL+EM+E G
Sbjct: 168 LIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAG 227
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +SYN+++ CL + GK +EA ++ + MI P T+N +++G CK D A
Sbjct: 228 REPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAE 287
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + P ++TY LI G +A RL A +++++ +G +P+ +TY ++
Sbjct: 288 RLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGL 347
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + E+L M K D Y ++ K+G++ +A +E M+ G Q ++
Sbjct: 348 CKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNL 407
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA------------ 289
V++NT+I+ +CK GK++ + +L+ M++ D T++ LIDG CKA
Sbjct: 408 VTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGI 467
Query: 290 -----------------GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
G ++ A+ ++ M K G Y I+ L + D A+
Sbjct: 468 SPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALK 527
Query: 333 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ + M + + +TYS +++ LCK KR+ A +L L+ G + +++DG
Sbjct: 528 MLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGF 586
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 198/386 (51%), Gaps = 2/386 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ DA +L M E PDV+TY SLI G + + L + L+++M E G
Sbjct: 133 LIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESG 192
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +YN+L++ L + + +E +++ ++M+ P T ++N ++ LC++ + A
Sbjct: 193 LTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAG 252
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + + P++VTYN L+ G CK ++ A +L+++ AP ITYTT++
Sbjct: 253 KILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGF 312
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + ++ M + G + D Y ++ K G+L+EA + +E MV D+
Sbjct: 313 SRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDV 372
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y+ L+N CK GK++ A LLL+ M ++G + + T +IDG CKAG + LE
Sbjct: 373 VTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLEL 432
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSA 361
M ++ ++ Y+ ++D K ++ A + D +YSSM+ LC ++ A
Sbjct: 433 MKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGI--SPDKASYSSMLEGLCSTGKVEEA 490
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGL 387
+++ K G S ++ GL
Sbjct: 491 QEVMDLMTKQGCPPTSSHYALIIGGL 516
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 201/394 (51%), Gaps = 10/394 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ C+ ++ IL +M E PDVVTYNSL+ G + S + + LL++M+
Sbjct: 238 VVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRR 297
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y +L+ + + +A RV +DM ++P T+N +L+GLCK + A
Sbjct: 298 CAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAH 357
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + P++VTY+IL+ GLCK G++ AR +L+ + + G PN +T+ T++
Sbjct: 358 ELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGF 417
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K G ++L MK T D Y T+I + K R+++A + G+ D
Sbjct: 418 CKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDK 471
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
SY++++ C GK+E A ++D M KQG + ++I GLC A L+
Sbjct: 472 ASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQV 531
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M++ G + NL Y+ +++ L K +++ AINV + M V D TY+S++ CK +
Sbjct: 532 MSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINK 591
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ +A + + SG K A ++ G SG
Sbjct: 592 MDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSG 625
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 197/422 (46%), Gaps = 37/422 (8%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS--- 71
GY+ P TY +LI G +R L++ +EML PDV ++N+
Sbjct: 8 GYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILK 67
Query: 72 ------------------------------LMHCLFQLGKPDEANRVFQDMICGDLTPCT 101
L+H L Q + DEA ++ +MI D P
Sbjct: 68 AYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDA 127
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
A +N ++ GLCK D A + + + + VP+++TY LI G C+ L AR ++++
Sbjct: 128 AVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEK 187
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ +SG P+ + Y ++ + + + ++L M G D F Y TV+A + G+
Sbjct: 188 MKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGK 247
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
+EA +E+M+ D+V+YN+L++ +CK K++ A LL++M + T+T
Sbjct: 248 YEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTT 307
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 341
LI G +A + A +E M K G +L YNC++D L K GK++ A + E M KD
Sbjct: 308 LIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKD 367
Query: 342 S----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
TYS +V+ LCK ++ A LL L+ G + ++DG +G E
Sbjct: 368 CAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGH 427
Query: 398 KI 399
K+
Sbjct: 428 KV 429
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 188/384 (48%), Gaps = 33/384 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D +C+ D +L M +P V+TY +LI G +R L+ + ++++M + G
Sbjct: 273 LMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAG 332
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+ +YN L+ L + GK +EA+ + + M+ D P T++I++NGLCK D+A
Sbjct: 333 ISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDAR 392
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC- 180
+ + + G P LVT+N +I G CKAG++ +L+ + + P+ +TY+T++
Sbjct: 393 LLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGY 452
Query: 181 CFRNR----------------------------KYKLGLEILSAMKRKGYTFDGFGYCTV 212
C NR K + E++ M ++G Y +
Sbjct: 453 CKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALI 512
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I + R EA ++ M G + ++ +Y+ LIN CK ++E A +LD M ++G
Sbjct: 513 IGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGC 572
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
D T+T LIDG CK + A + M G + + AYN ++ + G ++ AI
Sbjct: 573 VPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIE 632
Query: 333 VFESMEVK----DSFTYSSMVHNL 352
V + M K D+ TY S++ +L
Sbjct: 633 VMQLMLEKGCNPDAATYFSLMRSL 656
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 150/356 (42%), Gaps = 37/356 (10%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
+P E F++ P +T+ ++ G + + L + + F P+++T+N
Sbjct: 4 RPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHN 63
Query: 141 ---------------------------------ILIKGLCKAGRLRTARWILKELGDSGH 167
ILI GLC+ R+ A +L E+
Sbjct: 64 TILKAYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDC 123
Query: 168 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
P+A Y ++ + K +L M + D Y ++I + L EA
Sbjct: 124 HPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARK 183
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
ME+M G+ D V+YN L+N CK+ +LE LL+EM + G E D +++ ++ LC
Sbjct: 184 LMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLC 243
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSF 343
++G + A LE M + ++ YN ++D K K+D A + E M
Sbjct: 244 ESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVI 303
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
TY++++ +A RL A +++ K+G+ ++DGL +G EA ++
Sbjct: 304 TYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHEL 359
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 113/271 (41%), Gaps = 35/271 (12%)
Query: 134 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 193
P TY LI G +AG + I E+ +P+ IT+ TI+K +
Sbjct: 22 PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLD---RA 78
Query: 194 LSAMKRKGY-TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
LS + K + + F YC +I + R+ EA +++M+ D YN LI C
Sbjct: 79 LSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLC 138
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K GK++AA +L M ++ D T+T LI G C+ + AR +E M + G
Sbjct: 139 KMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGL----- 193
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
D+ Y+++++ LCK +L SKLL +++G
Sbjct: 194 --------------------------TPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAG 227
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ VV L SG EA KI K+
Sbjct: 228 REPDTFSYNTVVACLCESGKYEEAGKILEKM 258
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/391 (31%), Positives = 217/391 (55%), Gaps = 5/391 (1%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
++ +R G P+VVTY +LIA R L ++ LL+EM E G PP++ +YN L+ L +
Sbjct: 45 MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 104
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
L A V + MI G P TFN +++G CK D+A ++ + G P +VT
Sbjct: 105 LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVT 164
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
Y+ LI GLCK+ + A+ +L+E+ SG P+A TY+ ++ + K + ++L M
Sbjct: 165 YSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 224
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
G T D Y ++I AF K G+L EA +++M D+V+YNT+I+ CK GK+
Sbjct: 225 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 284
Query: 259 AAYLLLDEMEKQG-FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A ++LD+M++ G D T++ +I+GLCK+ + A+ L+ M K G + ++ Y I
Sbjct: 285 EAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTI 344
Query: 318 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+D L K G+++ A + + M+ + TY++++ LCKA+++ A +++ +G
Sbjct: 345 IDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGC 404
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+V+GL SG +EA+++ +++
Sbjct: 405 PPNLVTYNTMVNGLCVSGRIKEAQQLVQRMK 435
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/369 (31%), Positives = 199/369 (53%), Gaps = 5/369 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI A+ + + +L MRE G P++VTYN L+ + S++ + D++ +M+E G
Sbjct: 63 LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 122
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V ++NSL+ + G D+A ++ M+ + P T++ +++GLCK++ A
Sbjct: 123 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 182
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++ G P+ TY+ LI GLCKA ++ A +L+ + SG P+ + Y++I+
Sbjct: 183 EVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAF 242
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG-VQLD 240
++ K + L M+++ + D Y TVI K+G++ EA ++QM G V D
Sbjct: 243 CKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPD 302
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+Y+T+IN CK L A LLD M K G D T+T +IDGLCK G ++ A L+
Sbjct: 303 VVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQ 362
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + G N+ Y ++ L K K+D A V E M + TY++MV+ LC +
Sbjct: 363 GMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSG 422
Query: 357 RLPSASKLL 365
R+ A +L+
Sbjct: 423 RIKEAQQLV 431
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 193/372 (51%), Gaps = 7/372 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+DA C+ A ++ +M E G +P+V+T+NSL+ G + + + LL M+
Sbjct: 97 VLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAK 156
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V +Y++L+ L + K EA V ++M +TP T++ +++GLCK + A
Sbjct: 157 GMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEA 216
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+M R + G P++V Y+ +I CK+G+L A+ L+E+ +P+ +TY T++
Sbjct: 217 EQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDG 276
Query: 181 CFRNRKYKLGLEILSAMKRKGYTF-DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ K IL M+ G D Y TVI K L EA +++M G
Sbjct: 277 LCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNP 336
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+V+Y T+I+ CK G+LE A LL M++ G + T+T LI GLCKA + A +
Sbjct: 337 DVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVM 396
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME------VKDSFTYSSMVHNLC 353
E M G NL YN +V+ L G+I A + + M+ D+ TY ++V+ L
Sbjct: 397 EEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALM 456
Query: 354 KAKRLPSASKLL 365
+ + A +LL
Sbjct: 457 SSDLVQEAEQLL 468
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 199/405 (49%), Gaps = 8/405 (1%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
C A +L M+ AG +PD T+ +I L ++D L M G P+V
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
+Y +L+ + K +EA ++ ++M P T+N++++ LCK A + +
Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
+ + GF P ++T+N L+ G CK G + AR +L + G PN +TY+ ++ +++K
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
+ E+L MK G T D F Y +I K +++EA + +M G D+V Y++
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
+I+ +CK GKL A L EM KQ D T+ +IDGLCK G I A++ L+ M + G
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297
Query: 307 -FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSA 361
++ Y+ +++ L K + A + + M D TY++++ LCK RL A
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
LL ++G ++ GL + EA+++ ++R A
Sbjct: 358 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNA 402
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 141/270 (52%), Gaps = 5/270 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + +L RM +G +PDVV Y+S+I ++ L + L EM +
Sbjct: 203 LIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQR 262
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV +YN+++ L +LGK EA + M GD+ P T++ ++NGLCK+ A
Sbjct: 263 KSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEA 322
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + K G P++VTY +I GLCK GRL A ++L+ + +G APN +TYTT++
Sbjct: 323 QKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISG 382
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG---V 237
+ RK ++ M+ G + Y T++ GR+KEA +++M DG
Sbjct: 383 LCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM-KDGRAEC 441
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
D +Y T++N ++ A LL++M
Sbjct: 442 SPDAATYRTIVNALMSSDLVQEAEQLLEQM 471
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 133/267 (49%), Gaps = 7/267 (2%)
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C AG L A +L+E+ +G AP+A T+T I+ ++ L +M G +
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +IAAF + +L+EA +E+M G ++V+YN L++ CK + AA ++ +
Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M + GF + T L+DG CK GN+ AR L M G N+ Y+ ++D L K K
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177
Query: 327 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
A V E M+ D+FTYS+++H LCKA ++ A ++L SG +
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237
Query: 383 VVDGLRHSGCRREAKKIQSKIRMAKIS 409
++ SG EA+K ++R + S
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKS 264
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/394 (31%), Positives = 204/394 (51%), Gaps = 4/394 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C+ D Y + +M E G P++VTYN+L++G RN L+ + +LLDEM E G
Sbjct: 83 VIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERG 142
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +SY++LM L + GK D A +VF+D GD P ++ ++ GLCK D A
Sbjct: 143 LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEAC 202
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F ++++ P++VT+ L+ GLCK RL+ A+ +L+ + D PN ITY++++
Sbjct: 203 KLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGL 262
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + E+ M +G + Y ++I F + A ME+M G DI
Sbjct: 263 CKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDI 322
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YNTLI+ CK G+ A L +M+ + D T++ LI G CK I AR +
Sbjct: 323 ITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDD 382
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKR 357
M K ++ ++ +V+ G +D A + E M D +TY+S+V CK R
Sbjct: 383 MLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGR 442
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ A ++L K G + A++D +G
Sbjct: 443 MVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAG 476
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 218/411 (53%), Gaps = 6/411 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ Y +L M+E+G++P+VVTY+++I G R + + + L +M+E
Sbjct: 47 VLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVEN 106
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P++ +YN+L+ L + G DEA + +M L P +++ ++ GLCK D A
Sbjct: 107 GCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMA 166
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L++F P++V Y+ LI GLCK GRL A + +++ ++ P+ +T+T +M
Sbjct: 167 LKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDG 226
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + ++L M+ + T + Y ++I K G++++A + ++M+ G++ +
Sbjct: 227 LCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPN 286
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YN+LI+ +C +++A LL++EM G D T+ LIDGLCK G A
Sbjct: 287 VVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFG 346
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
M + ++ Y+C++ K +ID A +F+ M + D T+S++V C A
Sbjct: 347 DMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAG 406
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
+ A +LL + S ++VDG G EA+++ RMAK
Sbjct: 407 LVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLK--RMAK 455
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 193/369 (52%), Gaps = 6/369 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ + RM GI P+VVTYNSLI G + + +L L++EM G
Sbjct: 258 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 317
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ +YN+L+ L + G+ EANR+F DM P T++ ++ G CK D A
Sbjct: 318 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMAR 377
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + K +P++VT++ L++G C AG + A +L+E+ S +P+ TYT+++
Sbjct: 378 TLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGF 437
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + +L M ++G + Y +I AF + G+ A +E+MV +GVQ ++
Sbjct: 438 CKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNV 497
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEK-QGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++Y +LI +C G LE A +L+ +E+ + + D + + +++DGLC+ G + A LE
Sbjct: 498 ITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLE 557
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV-----KDSFTYSSMVHNLCKA 355
+ + G + Y ++ L + ++ A+ V E M + ++ Y +++ L +
Sbjct: 558 AIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELARE 617
Query: 356 KRLPSASKL 364
R A+ L
Sbjct: 618 GRHEEANAL 626
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 190/391 (48%), Gaps = 5/391 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ D + +MRE PDVVT+ +L+ G + L + +L+ M +
Sbjct: 188 LIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 247
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +Y+SL+ L + G+ +A VF+ MI + P T+N +++G C D+AL
Sbjct: 248 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSAL 307
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G +P+++TYN LI GLCK GR A + ++ P+ ITY+ ++
Sbjct: 308 LLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGF 367
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + + M ++ D + T++ + G + +A +E+MV D+
Sbjct: 368 CKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDV 427
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y +L++ +CK G++ A +L M K+G + + T+T LID C+AG A LE
Sbjct: 428 YTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEE 487
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-----VKDSFTYSSMVHNLCKAK 356
M G N+ Y ++ G ++ A + E +E D F Y M+ LC+
Sbjct: 488 MVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTG 547
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
R+ +A +LL + +SG A++ GL
Sbjct: 548 RMSAALELLEAIKQSGTPPRHDIYVALIRGL 578
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 176/340 (51%), Gaps = 4/340 (1%)
Query: 30 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 89
+V+T+ +I G + + L + +M + G P+ W+YN L++ ++ K A +
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65
Query: 90 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
++M L P T++ +++G C+ D A ++FR + ++G +P LVTYN L+ GLC+
Sbjct: 66 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125
Query: 150 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 209
G + A +L E+ + G P+ +Y T+M + K + L++ D Y
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 185
Query: 210 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
T+IA K GRL EA E+M + + D+V++ L++ CK +L+ A +L+ ME
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 245
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 329
+ + T++ LIDGLCK G ++ A+ + M G + N+ YN ++ +D
Sbjct: 246 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 305
Query: 330 AINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
A+ + E M + D TY++++ LCK R P A++L
Sbjct: 306 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLF 345
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 128/268 (47%), Gaps = 2/268 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ D T+ + M + + PDVVT+++L+ G L+ + LL+EM+
Sbjct: 363 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 422
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV++Y SL+ ++G+ EA RV + M P T+ +++ C+ A
Sbjct: 423 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAY 482
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG-DSGHAPNAITYTTIMKC 180
++ + +G P ++TY LI G C G L AR +L+ L D + Y +M
Sbjct: 483 KLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDG 542
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM-VTDGVQL 239
R + LE+L A+K+ G Y +I + L +A + +E+M ++ +
Sbjct: 543 LCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRP 602
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEM 267
+ +Y +I +EG+ E A L DE+
Sbjct: 603 NAEAYEAVIQELAREGRHEEANALADEL 630
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 113/240 (47%), Gaps = 4/240 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ YC D +L M + SPDV TY SL+ G + + + +L M + G
Sbjct: 398 LVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRG 457
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +Y +L+ + GKP A ++ ++M+ + P T+ ++ G C + A
Sbjct: 458 CQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEAR 517
Query: 122 RMFRGLQK-HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+M L++ ++ Y +++ GLC+ GR+ A +L+ + SG P Y +++
Sbjct: 518 KMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRG 577
Query: 181 CFRNRKYKLGLEILSAM--KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ ++ +E+L M RK + Y VI + GR +EA ++++ + Q
Sbjct: 578 LCQGKELGKAMEVLEEMTLSRKSRP-NAEAYEAVIQELAREGRHEEANALADELLGNKGQ 636
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 210/402 (52%), Gaps = 11/402 (2%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
I C+ T+ + MR+ G P+ +TYN+L++G +S + L + M++ G
Sbjct: 57 ISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGY 116
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
PDV +YN+L+H ++GK DEA ++F + P T+N ++NG CK D A R
Sbjct: 117 SPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQR 176
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CC 181
+ + + VP++VTYN L+ GLCK GR+ AR ++ D G +PN ITY+T++ C
Sbjct: 177 ILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIV---DKGFSPNVITYSTLISGLC 233
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ + ++L M G D Y +I + + EA ++ G + ++
Sbjct: 234 RELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEV 293
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN LI+ KE ++ A+ L + K G E D T+T+ IDGLCKAG ++ A L L+
Sbjct: 294 PTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKD 353
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M++ G ++ ++N +++ L K+ ++D A + ME K ++ ++++++ C+A +
Sbjct: 354 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGK 413
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGL---RHSGCRREA 396
A LK GV+ +VDGL R G +EA
Sbjct: 414 WKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEA 455
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/426 (30%), Positives = 214/426 (50%), Gaps = 40/426 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL--------------- 46
LI+ +C+ D IL RM + PDVVTYNSL+ G +N
Sbjct: 161 LINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSP 220
Query: 47 ------------------LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
L + LL++M+ G PD+ SYN+L+H L + EA ++
Sbjct: 221 NVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKL 280
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
F ++ P T+NI+++GL K + A +F GL KHG P+ +TY + I GLCK
Sbjct: 281 FGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCK 340
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
AGR+ A +LK++ + G P+ +++ ++ + ++ +LS M+ KG + +
Sbjct: 341 AGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAIS 400
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK---EGKLEAAYLLLD 265
+ T+I + G+ K+A ++M+ GV+ +V+YN L++ CK EG+++ A L D
Sbjct: 401 FNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFD 460
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M ++G D T++ LIDGL KAG + AR L M G N+ YN ++ L
Sbjct: 461 AMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLD 520
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
K+D A+ +F +M V D+ TY +++ LCK + + A L L++GV
Sbjct: 521 KVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYF 580
Query: 382 AVVDGL 387
+++DGL
Sbjct: 581 SLIDGL 586
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/406 (31%), Positives = 214/406 (52%), Gaps = 11/406 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C + RM +AG SPDVVTYN+L+ G + L +L + D ++ G
Sbjct: 91 LLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRG 150
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV +YN+L++ + K DEA R+ Q M+ L P T+N ++NGLCKN D A
Sbjct: 151 FVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEA- 209
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKA-GRLRTARWILKELGDSGHAPNAITYTTIMKC 180
RM + GF P ++TY+ LI GLC+ RL +AR +L+++ +G P+ ++Y ++
Sbjct: 210 RML--IVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHG 267
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + L++ ++ R+GY + Y +I +K R+ EA + +V G++ D
Sbjct: 268 LAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPD 327
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++Y I+ CK G++E A L+L +M+++G D +H +I+GLCK + A + L
Sbjct: 328 AITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLS 387
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDS-FTYSSMVHNLCKAK 356
M G N ++N ++ + GK A+ F+ M VK + TY+ +V LCKA+
Sbjct: 388 GMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKAR 447
Query: 357 ---RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
R+ A L + ++ G A++DGL +G +A+++
Sbjct: 448 QEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRL 493
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 181/333 (54%), Gaps = 9/333 (2%)
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
PD ++ L+ L + GK ++A+R + ++ L +TFNI ++GLC+ +A +
Sbjct: 14 PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCD-ISTFNIYISGLCRASRIGDAQTV 72
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
F G++KHGF P +TYN L+ GLC GR+ A+ + + + +G++P+ +TY T++ +
Sbjct: 73 FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
K L+I ++G+ D Y +I F K +L EA +++MV++ + D+V+
Sbjct: 133 VGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVT 192
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA-GNIKGARLHLEYM 302
YN+L+N CK G+++ A +L+ + +GF + T++ LI GLC+ ++ AR LE M
Sbjct: 193 YNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQLLEKM 249
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 358
G ++ +YN ++ L ++ + A+ +F S+ + + TY+ ++ L K R+
Sbjct: 250 VLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRV 309
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
A +L +K G+ +DGL +G
Sbjct: 310 NEAFELFSGLVKHGLEPDAITYTVFIDGLCKAG 342
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 148/298 (49%), Gaps = 3/298 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID + + + + + + + G+ PD +TY I G + + +L +L +M E
Sbjct: 298 ILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK 357
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV S+N++++ L + + DEA + M +P +FN ++ G C+ A
Sbjct: 358 GCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKA 417
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKA---GRLRTARWILKELGDSGHAPNAITYTTI 177
+ F+ + K G P +VTYNIL+ GLCKA GR++ A + + + G P+ +TY+ +
Sbjct: 418 MTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSAL 477
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + K +L AM+ KG + + Y ++I+ + ++ EA + MV G
Sbjct: 478 IDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGC 537
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
D ++Y T+I+ CK+ ++ A L D + G + LIDGLC + A
Sbjct: 538 VPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEA 595
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 133/267 (49%), Gaps = 3/267 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ ID C+ + +L M E G PDVV++N++I G + + + LL M
Sbjct: 333 VFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAK 392
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY---T 117
G P+ S+N+L+ + GK +A F++M+ + P T+NI+++GLCK R
Sbjct: 393 GCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRI 452
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
A+ +F + + G VP++VTY+ LI GL KAG+L AR +L + G PN TY ++
Sbjct: 453 KEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSL 512
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ K LE+ AM KG D Y T+I+A K + +A + + GV
Sbjct: 513 ISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGV 572
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLL 264
Y +LI+ C +++ A LL
Sbjct: 573 VPTSGMYFSLIDGLCAVARVDEALKLL 599
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 107/232 (46%), Gaps = 3/232 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ D +L+ M G SP+ +++N+LI G R ++ EML+ G
Sbjct: 369 VINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG 428
Query: 62 IPPDVWSYNSLMHCL---FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
+ P V +YN L+ L Q G+ EA +F MI P T++ +++GL K D
Sbjct: 429 VKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLD 488
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
+A R+ ++ G +P + TYN LI GLC ++ A + + + G P+ ITY TI+
Sbjct: 489 DARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTII 548
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
+ L + G Y ++I + R+ EA ++
Sbjct: 549 SALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 82/163 (50%), Gaps = 3/163 (1%)
Query: 1 MLIDAYC---QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 57
+L+D C Q T+ + M E G PDVVTY++LI G + L + LL M
Sbjct: 438 ILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAM 497
Query: 58 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
G P+V++YNSL+ L L K DEA +F M+ P T T+ +++ LCK
Sbjct: 498 EAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMV 557
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
D AL +F G + G VP Y LI GLC R+ A +L+
Sbjct: 558 DKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/411 (32%), Positives = 204/411 (49%), Gaps = 13/411 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ AG + + E G PDVVTYN+LI + L + L +M G
Sbjct: 43 IINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRG 102
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYTDN 119
P+V +Y+ L++ L ++G+ DEA + Q+M D+ P T+N L+GLCK T
Sbjct: 103 CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAE 162
Query: 120 ALRMFRGLQKHGF--VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
A + R L+ P+ VT++ LI GLCK G++ A + ++ G+ PN ITY +
Sbjct: 163 ACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNAL 222
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + K + ++ +M KG T D Y ++ AF K R+ EA + + M + G
Sbjct: 223 VNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGC 282
Query: 238 QLDI-----VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
++ V++N LI CK G E A L +EM + + D T LIDGLCKAG +
Sbjct: 283 TPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQV 342
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSM 348
+ AR L+ M +G N+ YN +V L K G+I+ A E M V DS TY S+
Sbjct: 343 EAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSL 402
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
V+ LC+A R A +L+ G +VDGL SG +A +
Sbjct: 403 VYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITV 453
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 198/404 (49%), Gaps = 13/404 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRM--REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
+LI+ C+ D ++ M + + P+++TYNS + G + S+ + + +L+ +
Sbjct: 112 VLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLR 171
Query: 59 E--MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
+ + + PD ++++L+ L + G+ DEA VF DMI G P T+N ++NGLCK
Sbjct: 172 DGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADK 231
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA----- 171
+ A M + G P+++TY++L+ CKA R+ A +L + G PN
Sbjct: 232 MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDK 291
Query: 172 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 231
+T+ ++ + ++ + M K D + +I K G+++ A D ++
Sbjct: 292 VTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDL 351
Query: 232 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
M GV ++V+YN L++ CK G++E A L+EM G D T+ L+ LC+A
Sbjct: 352 MGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASR 411
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSS 347
A + + G+D + YN +VD L K GK + AI V E M K DSFT+++
Sbjct: 412 TDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAA 471
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
L ++ L +LL L G+ + +++D + SG
Sbjct: 472 CFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSG 515
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 167/342 (48%), Gaps = 5/342 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ D ++ + M G P+V+TYN+L+ G + + + +++ M++ G
Sbjct: 187 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 246
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT-----ATFNIMLNGLCKNRY 116
+ PDV +Y+ L+ + + DEA + M TP TFNI++ G CK
Sbjct: 247 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGN 306
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
+ A +F + P+++T+ LI GLCKAG++ AR IL +G+ G PN +TY
Sbjct: 307 FEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNA 366
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ ++ + + + L M G D Y +++ A + R +A + ++ + G
Sbjct: 367 LVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFG 426
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
D V+YN L++ K GK E A +L+EM +G + D +T GL ++GN+ G
Sbjct: 427 WDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTM 486
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
L + G + + I+D + + GK+D + + E
Sbjct: 487 ELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 179/389 (46%), Gaps = 48/389 (12%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
M G++P +VTYN++I G +++ L ++L +E++E G PDV
Sbjct: 27 EMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDV-------------- 72
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
T+N +++ LCK + A R+ + G VP +VTY+
Sbjct: 73 ---------------------VTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYS 111
Query: 141 ILIKGLCKAGRLRTARWILKELGDSG--HAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
+LI GLCK GR+ AR +++E+ PN ITY + + + E++ +++
Sbjct: 112 VLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLR 171
Query: 199 RKG--YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
+ D + T+I K G++ EA + M+ G ++++YN L+N CK K
Sbjct: 172 DGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADK 231
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL----- 311
+E A+ +++ M +G D T+++L+D CKA + A L M G N+
Sbjct: 232 MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDK 291
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLS 367
+N ++ K G + A +FE M K D T+ +++ LCKA ++ +A +L
Sbjct: 292 VTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDL 351
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREA 396
GV A+V GL SG EA
Sbjct: 352 MGNLGVPPNVVTYNALVHGLCKSGRIEEA 380
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 121/224 (54%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ +F+ + M + PDV+T+ +LI G + + + D+LD M +
Sbjct: 296 ILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL 355
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+PP+V +YN+L+H L + G+ +EA + ++M+ P + T+ ++ LC+ TD+A
Sbjct: 356 GVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDA 415
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L++ L+ G+ P+ VTYNIL+ GL K+G+ A +L+E+ GH P++ T+
Sbjct: 416 LQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSG 475
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
R+ +E+L + KG D +++ + G+L +
Sbjct: 476 LHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDD 519
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 209 YCTVIAAFVKIGRLKEATD-YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y V+ + + G A + + +M DGV IV+YNT+IN CK L A L +E+
Sbjct: 4 YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
++G D T+ LID LCKAG+++ AR M+ G N+ Y+ +++ L K G+I
Sbjct: 64 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123
Query: 328 DHAINVFESMEVK------DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ- 380
D A + + M K + TY+S + LCK A +L+ S +R+
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 183
Query: 381 -KAVVDGLRHSGCRREA 396
++DGL G EA
Sbjct: 184 FSTLIDGLCKCGQIDEA 200
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 47/91 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D + + T+L M G PD T+ + +G R+ L+ +++LL +L
Sbjct: 436 ILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAK 495
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 91
G+ PD + +S++ + + GK D+ + ++
Sbjct: 496 GMLPDATTCSSILDWVCRSGKLDDVKAMIKE 526
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/394 (31%), Positives = 204/394 (51%), Gaps = 4/394 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C+ D Y + +M E G P++VTYN+L++G RN L+ + +LLDEM E G
Sbjct: 202 VIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERG 261
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +SY++LM L + GK D A +VF+D GD P ++ ++ GLCK D A
Sbjct: 262 LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEAC 321
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F ++++ P++VT+ L+ GLCK RL+ A+ +L+ + D PN ITY++++
Sbjct: 322 KLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGL 381
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + E+ M +G + Y ++I F + A ME+M G DI
Sbjct: 382 CKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDI 441
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YNTLI+ CK G+ A L +M+ + D T++ LI G CK I AR +
Sbjct: 442 ITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDD 501
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKR 357
M K ++ ++ +V+ G +D A + E M D +TY+S+V CK R
Sbjct: 502 MLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGR 561
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ A ++L K G + A++D +G
Sbjct: 562 MVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAG 595
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 219/411 (53%), Gaps = 6/411 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ Y +L M+E+G++P+VVTY+++I G R + + + L +M+E
Sbjct: 166 VLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVEN 225
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P++ +YN+L+ L + G DEA + +M L P +++ ++ GLCK D A
Sbjct: 226 GCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMA 285
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L++F P++V Y+ LI GLCKAGRL A + +++ ++ P+ +T+T +M
Sbjct: 286 LKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDG 345
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + ++L M+ + T + Y ++I K G++++A + ++M+ G++ +
Sbjct: 346 LCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPN 405
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YN+LI+ +C +++A LL++EM G D T+ LIDGLCK G A
Sbjct: 406 VVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFG 465
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
M + ++ Y+C++ K +ID A +F+ M + D T+S++V C A
Sbjct: 466 DMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAG 525
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
+ A +LL + S ++VDG G EA+++ RMAK
Sbjct: 526 LVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLK--RMAK 574
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 203/437 (46%), Gaps = 42/437 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L +A + D IL GI+P+V TY +I G ++ L + +LL+EM E G
Sbjct: 30 LFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESG 89
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD YN ++H L + +A F+ M C T+ IM++GLCK A
Sbjct: 90 PVPDAAIYNFVIHALCKARNTAKALDYFRSMEC---EKNVITWTIMIDGLCKANRLPEAT 146
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F ++K G VP TYN+LI G CK ++ A +LKE+ +SG APN +TY+T++
Sbjct: 147 TYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGF 206
Query: 182 FRNRK----YKL-------------------------------GLEILSAMKRKGYTFDG 206
R K YKL E+L M+ +G D
Sbjct: 207 CRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDK 266
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
F Y T++A K G++ A E D+V+Y+TLI CK G+L+ A L ++
Sbjct: 267 FSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEK 326
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M + E D T T L+DGLCK ++ A+ LE M N+ Y+ ++D L K G+
Sbjct: 327 MRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQ 386
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+ A VF+ M V+ + TY+S++H C + SA L+ +G
Sbjct: 387 VRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNT 446
Query: 383 VVDGLRHSGCRREAKKI 399
++DGL +G EA ++
Sbjct: 447 LIDGLCKTGRAPEANRL 463
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 193/369 (52%), Gaps = 6/369 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ + RM GI P+VVTYNSLI G + + +L L++EM G
Sbjct: 377 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 436
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ +YN+L+ L + G+ EANR+F DM P T++ ++ G CK D A
Sbjct: 437 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMAR 496
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + K +P++VT++ L++G C AG + A +L+E+ S +P+ TYT+++
Sbjct: 497 TLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGF 556
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + +L M ++G + Y +I AF + G+ A +E+MV +GVQ ++
Sbjct: 557 CKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNV 616
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEK-QGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++Y +LI +C G LE A +L+ +E+ + + D + + +++DGLC+ G + A LE
Sbjct: 617 ITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLE 676
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV-----KDSFTYSSMVHNLCKA 355
+ + G + Y ++ L + ++ A+ V E M + ++ Y +++ L +
Sbjct: 677 AIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELARE 736
Query: 356 KRLPSASKL 364
R A+ L
Sbjct: 737 GRHEEANAL 745
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 190/391 (48%), Gaps = 5/391 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ D + +MRE PDVVT+ +L+ G + L + +L+ M +
Sbjct: 307 LIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 366
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +Y+SL+ L + G+ +A VF+ MI + P T+N +++G C D+AL
Sbjct: 367 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSAL 426
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G +P+++TYN LI GLCK GR A + ++ P+ ITY+ ++
Sbjct: 427 LLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGF 486
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + + M ++ D + T++ + G + +A +E+MV D+
Sbjct: 487 CKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDV 546
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y +L++ +CK G++ A +L M K+G + + T+T LID C+AG A LE
Sbjct: 547 YTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEE 606
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-----VKDSFTYSSMVHNLCKAK 356
M G N+ Y ++ G ++ A + E +E D F Y M+ LC+
Sbjct: 607 MVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTG 666
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
R+ +A +LL + +SG A++ GL
Sbjct: 667 RMSAALELLEAIKQSGTPPRHDIYVALIRGL 697
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 189/381 (49%), Gaps = 7/381 (1%)
Query: 23 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 82
++ G +V TYN L R + + +L GI P+V++Y ++ L + G
Sbjct: 16 KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
D+A + ++M P A +N +++ LCK R T AL FR ++ V +T+ I+
Sbjct: 76 DKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNV---ITWTIM 132
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
I GLCKA RL A ++ G PN TY ++ + K +L MK G
Sbjct: 133 IDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGL 192
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
+ Y TVI F + ++ A QMV +G ++V+YNTL++ C+ G ++ AY
Sbjct: 193 APNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYE 252
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
LLDEM ++G + DK+++ L+ GLCK G I A E + ++ AY+ ++ L
Sbjct: 253 LLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLC 312
Query: 323 KDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
K G++D A +FE M D T+++++ LCK RL A ++L +
Sbjct: 313 KAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVI 372
Query: 379 AQKAVVDGLRHSGCRREAKKI 399
+++DGL +G R+A+++
Sbjct: 373 TYSSLIDGLCKTGQVRDAQEV 393
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 128/268 (47%), Gaps = 2/268 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ D T+ + M + + PDVVT+++L+ G L+ + LL+EM+
Sbjct: 482 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 541
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV++Y SL+ ++G+ EA RV + M P T+ +++ C+ A
Sbjct: 542 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAY 601
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG-DSGHAPNAITYTTIMKC 180
R+ + +G P ++TY LI G C G L AR IL+ L D + Y +M
Sbjct: 602 RLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDG 661
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM-VTDGVQL 239
R + LE+L A+K+ G Y +I + L +A + +E+M ++ +
Sbjct: 662 LCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRP 721
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEM 267
+ +Y +I +EG+ E A L DE+
Sbjct: 722 NAEAYEAVIQELAREGRHEEANALADEL 749
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 113/240 (47%), Gaps = 4/240 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ YC D +L M + SPDV TY SL+ G + + + +L M + G
Sbjct: 517 LVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRG 576
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +Y +L+ + GKP A R+ ++M+ + P T+ ++ G C + A
Sbjct: 577 CQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEAR 636
Query: 122 RMFRGLQK-HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ L++ ++ Y +++ GLC+ GR+ A +L+ + SG P Y +++
Sbjct: 637 KILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRG 696
Query: 181 CFRNRKYKLGLEILSAM--KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ ++ +E+L M RK + Y VI + GR +EA ++++ + Q
Sbjct: 697 LCQGKELGKAMEVLEEMTLSRKSRP-NAEAYEAVIQELAREGRHEEANALADELLGNKGQ 755
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 7/182 (3%)
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
A K++G+ + + Y + A ++ R+ E ++ G+ ++ +Y +I CK G
Sbjct: 14 ASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSG 73
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
L+ A LL+EM + G D + +I LCKA N A L+Y + + N+ +
Sbjct: 74 DLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKA---LDYFRSMECEKNVITWT 130
Query: 316 CIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++D L K ++ A F M+ V + +TY+ +++ CK ++ A LL +S
Sbjct: 131 IMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKES 190
Query: 372 GV 373
G+
Sbjct: 191 GL 192
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 126/416 (30%), Positives = 216/416 (51%), Gaps = 7/416 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI A+ + + +L MRE G P++VTYN L+ + S++ + D++ +M+E G
Sbjct: 185 LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 244
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V ++NSL+ + G D+A ++ M+ + P T++ +++GLCK++ A
Sbjct: 245 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 304
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++ G P+ TY+ LI GLCKA ++ A +L+ + SG P+ + Y++I+
Sbjct: 305 EVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAF 364
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG-VQLD 240
++ K + L M+++ + D Y TVI K+G++ EA +EQM G V D
Sbjct: 365 CKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPD 424
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+Y+T+IN CK L A LLD M K G D T+T +IDGLCK G ++ A L+
Sbjct: 425 VVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQ 484
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + G N+ Y ++ L K K+D A V E M + TY++MV+ LC +
Sbjct: 485 GMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSG 544
Query: 357 RLPSASKLLLSCLKSGVRILKSAQ--KAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
R+ A +L+ A + +V+ L S +EA+++ +++ S
Sbjct: 545 RIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKSTTSSQ 600
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 216/391 (55%), Gaps = 5/391 (1%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
++ +R G P+VVTY +LIA R L ++ LL+EM E G PP++ +YN L+ L +
Sbjct: 167 MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 226
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
L A V + MI G P TFN +++G CK D+A ++ + G P +VT
Sbjct: 227 LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVT 286
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
Y+ LI GLCK+ + A+ +L+E+ G P+A TY+ ++ + K + ++L M
Sbjct: 287 YSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 346
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
G T D Y ++I AF K G+L EA +++M D+V+YNT+I+ CK GK+
Sbjct: 347 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 406
Query: 259 AAYLLLDEMEKQG-FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A ++L++M++ G D T++ +I+GLCK+ + A+ L+ M K G + ++ Y I
Sbjct: 407 EAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTI 466
Query: 318 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+D L K G+++ A + + M+ + TY++++ LCKA+++ A +++ +G
Sbjct: 467 IDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGC 526
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+V+GL SG +EA+++ +++
Sbjct: 527 PPNLVTYNTMVNGLCVSGRIKEAQQLVQRMK 557
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 193/372 (51%), Gaps = 7/372 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+DA C+ A ++ +M E G +P+V+T+NSL+ G + + + LL M+
Sbjct: 219 VLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAK 278
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V +Y++L+ L + K EA V ++M +TP T++ +++GLCK + A
Sbjct: 279 GMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEA 338
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+M R + G P++V Y+ +I CK+G+L A+ L+E+ +P+ +TY T++
Sbjct: 339 EQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDG 398
Query: 181 CFRNRKYKLGLEILSAMKRKGYTF-DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ K IL M+ G D Y TVI K L EA +++M G
Sbjct: 399 LCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNP 458
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+V+Y T+I+ CK G+LE A LL M++ G + T+T LI GLCKA + A +
Sbjct: 459 DVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVM 518
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME------VKDSFTYSSMVHNLC 353
E M G NL YN +V+ L G+I A + + M+ D+ TY ++V+ L
Sbjct: 519 EEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALM 578
Query: 354 KAKRLPSASKLL 365
+ + A +LL
Sbjct: 579 SSDLVQEAEQLL 590
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 181/393 (46%), Gaps = 16/393 (4%)
Query: 25 AGISPDVVTYNSL-----IAGATRNSLLSCSLDL-LDEMLEMGIPP---DVWSYNSLMHC 75
+ I PD+ ++ I G NSL L L IP +S+NSL+
Sbjct: 27 SAIEPDLSPFSGASTTPRIVGRVVNSLKDAKLALAFFRWAPASIPGFSHTAFSWNSLLQV 86
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
L + K EA +F+ + P ++NI+++G C AL + ++ GF P+
Sbjct: 87 LVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPD 146
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
T+ +I + AG L A + L G PN +TYT ++ R +K + +++L
Sbjct: 147 AFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLE 203
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M+ +G + Y ++ A K+ + A D +++M+ G +++++N+L++ +CK G
Sbjct: 204 EMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRG 263
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
++ A LL M +G + T++ LIDGLCK+ A+ LE M G + Y+
Sbjct: 264 NVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYS 323
Query: 316 CIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++ L K KI+ A + M D YSS++H CK+ +L A K L K
Sbjct: 324 ALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQ 383
Query: 372 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
V+DGL G EA+ I +++
Sbjct: 384 RKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQ 416
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 156/311 (50%), Gaps = 7/311 (2%)
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
++N +L L + + A +FR P++ +YNI+I G C AG L A +L+E+
Sbjct: 79 SWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEM 138
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
+G AP+A T+T I+ ++ L +M G + Y +IAAF + +L
Sbjct: 139 KSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKL 195
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
+EA +E+M G ++V+YN L++ CK + AA ++ +M + GF + T L
Sbjct: 196 EEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSL 255
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 340
+DG CK GN+ AR L M G N+ Y+ ++D L K K A V E M+ +
Sbjct: 256 VDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGV 315
Query: 341 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
D+FTYS+++H LCKA ++ A ++L SG +++ SG EA+K
Sbjct: 316 TPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQK 375
Query: 399 IQSKIRMAKIS 409
++R + S
Sbjct: 376 TLQEMRKQRKS 386
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 184/418 (44%), Gaps = 37/418 (8%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G S ++NSL+ R + DL L PDV SYN ++ G A
Sbjct: 72 GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131
Query: 86 NRVFQDMI--------------------CGDL------------TPCTATFNIMLNGLCK 113
+ ++M GDL P T+ ++ +
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFAR 191
Query: 114 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+ + A+++ +++ G P LVTYN+L+ LCK + A+ ++K++ + G APN +T
Sbjct: 192 AKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMT 251
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
+ +++ + ++L M KG + Y +I K + EA + +E+M
Sbjct: 252 FNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMK 311
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
T GV D +Y+ LI+ CK K+E A +L M G D ++ +I CK+G +
Sbjct: 312 TRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLL 371
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-----VKDSFTYSSM 348
A+ L+ M K ++ YN ++D L K GKI A + E M+ + D TYS++
Sbjct: 372 EAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTV 431
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
++ LCK+ L A KLL K+G ++DGL G EA+ + ++ A
Sbjct: 432 INGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRA 489
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 216/413 (52%), Gaps = 5/413 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I + + D+ + +RMR G SPDVVTYN +I L + +++DE+L+ G
Sbjct: 137 MISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDG 196
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y L+ G+ +EA +F +++ L P T+N ++ G+CK D AL
Sbjct: 197 CKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRAL 256
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R L G P++V+YNIL++ R ++K++ SG PN +T++ ++
Sbjct: 257 DFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSF 316
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + + + +L MK KG T D + Y +I+AF K GRL A +Y+E+MV+DG DI
Sbjct: 317 CREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDI 376
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNT++ CK G + A + +++++ G + + L GN A +
Sbjct: 377 VNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISE 436
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M + G D + YN ++ L +DG +D AI + ME +++ ++ +CKA R
Sbjct: 437 MIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHR 496
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI-RMAKIS 409
+ +LL++ ++ G +++ +++G+ ++G R EA ++ + + R+ IS
Sbjct: 497 VFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGVIS 549
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/397 (31%), Positives = 206/397 (51%), Gaps = 15/397 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D C+ F+ +++L M E P TYN+LI+G + + + DL+DE + G
Sbjct: 302 IMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSG 361
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV +Y+ L L + G+ DEA + ++M TP T+N +++GLCK T+ A
Sbjct: 362 FVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAY 421
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L GFVP++VTY I++ GLCK GRL A +++ + G P+ ITYT +M+
Sbjct: 422 ELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGL 481
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ--- 238
R + I M K T D Y +++ + K R KEA Q V DG++
Sbjct: 482 CRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA-----QKVVDGIRGTP 536
Query: 239 -LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+D+ YN L++ YCKEG+L+ + ++M +G + T+ I++DGLCK G + A
Sbjct: 537 YIDV--YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFP 594
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 353
LE M+ G ++ +YN I+D L K K A V + M D+ TY++++ C
Sbjct: 595 FLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFC 654
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
K +R A +L + +K+GV ++ GL +
Sbjct: 655 KEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQT 691
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 210/411 (51%), Gaps = 7/411 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C+ D L M E ++PDV TYN LI G + S + ++L EM++ G
Sbjct: 232 IIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRG 291
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD ++NS+M L + GK + A+ + M + P T+N +++GLCK + D A
Sbjct: 292 VTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAK 351
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ GFVP++VTY+IL GLCK GR+ A ++KE+ G PN +TY T++
Sbjct: 352 DLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGL 411
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + E+L ++ G+ D Y ++ K GRL +A +E M+ G +
Sbjct: 412 CKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSV 471
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y L+ C+ G+++ A+ + EM + D + L++G CK+ K A+ +
Sbjct: 472 ITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQ---KV 528
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
++ I ++ YN ++D K+G++D NVFE M V + TY+ ++ LCK +
Sbjct: 529 VDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGK 588
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+ A L S +G + ++DGL + +EA+++ ++ A I
Sbjct: 589 VDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGI 639
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 187/370 (50%), Gaps = 10/370 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I + CQ D +T+L++ + G P+V Y L + L +L++
Sbjct: 165 LVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIF-----R 219
Query: 61 GIP-PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
IP PD +YN+++H + D A ++M + P T+NI+++GLCK TD
Sbjct: 220 NIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDK 279
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A M + G P+ VT+N ++ GLCKAG+ A +L + + P+ TY T++
Sbjct: 280 ASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLIS 339
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + +++ G+ D Y + K GR+ EA + +++M G
Sbjct: 340 GLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTP 399
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
++V+YNTLI+ CK K E AY LL+ + GF D T+TI++DGLCK G + A +
Sbjct: 400 NLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMV 459
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
E M K G ++ Y +++ L + G++D A ++F+ M K D+ Y S+V+ CK+
Sbjct: 460 EGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKS 519
Query: 356 KRLPSASKLL 365
R A K++
Sbjct: 520 SRTKEAQKVV 529
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 197/398 (49%), Gaps = 8/398 (2%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
S D + RM +AG +PD TY+ +I + + + + +LD+ G P+V Y
Sbjct: 140 SSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYT 199
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
L + G+ +A +F+++ +P +N +++G C+ D AL + + +
Sbjct: 200 ILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNER 255
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
P++ TYNILI GLCKA + A +L E+ D G P+ +T+ +IM + K++
Sbjct: 256 KVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERA 315
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+L+ M + Y T+I+ K + A D +++ V+ G D+V+Y+ L +
Sbjct: 316 HSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADG 375
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
CK G+++ A+ L+ EM +G + T+ LIDGLCKA + A LE + GF +
Sbjct: 376 LCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPD 435
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLL 366
+ Y IVD L K+G++D A+ + E M TY++++ LC+ R+ A +
Sbjct: 436 VVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFK 495
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A ++V+G S +EA+K+ IR
Sbjct: 496 EMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIR 533
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 188/372 (50%), Gaps = 16/372 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ D + I M + D + Y SL+ G ++S + ++D G
Sbjct: 477 LMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD-----G 531
Query: 62 I--PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
I P + YN+LM + G+ DE VF+DM C P T+NI+++GLCK+ D
Sbjct: 532 IRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDE 591
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + G VP++V+YNI+I GL KA + + AR +L ++ +G P+A+TY T+M
Sbjct: 592 AFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMA 651
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ ++ + IL M + G D Y T+I+ + RL +A + M +M+ +G +
Sbjct: 652 QFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVV 711
Query: 240 DI-VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+YNT+I+ CKEG L+ A LL+D M G E + T+ I ID LCK G + A
Sbjct: 712 SACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSL 771
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EVK----DSFTYSSMVHNLC 353
L M+ + + +Y ++ L K ++D A + M VK S T++ ++
Sbjct: 772 LSEMDTL---RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFT 828
Query: 354 KAKRLPSASKLL 365
K KRL A LL
Sbjct: 829 KTKRLDEALTLL 840
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 160/337 (47%), Gaps = 8/337 (2%)
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
+ G ++ N + L + G D +F+ M+ P + T+++++ LC+ D
Sbjct: 118 DRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQID 177
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A M + GF PE+ Y IL + CK GRL+ A I + + +P+AI Y I+
Sbjct: 178 KAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNI----PSPDAIAYNAII 233
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
R LE L M + D F Y +I K + +A++ + +MV GV
Sbjct: 234 HGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVT 293
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D V++N++++ CK GK E A+ LL M ++ T+ LI GLCK N+ A+
Sbjct: 294 PDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDL 353
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
++ GF ++ Y+ + D L K G+ID A + + M K + TY++++ LCK
Sbjct: 354 VDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCK 413
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
A + A +LL S + SG +VDGL G
Sbjct: 414 ASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEG 450
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 156/342 (45%), Gaps = 46/342 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D C+ D + L M AG PDVV+YN +I G + S + +LD+M++
Sbjct: 578 IVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQA 637
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG---------- 110
GIPPD +YN+LM + + D+A + ++MI + P T+N +++G
Sbjct: 638 GIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDA 697
Query: 111 --------------------------LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
LCK AL + + HG VTYNI I
Sbjct: 698 YELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFID 757
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIM----KCCFRNRKYKLGLEILSAMKRK 200
LCK GRL A +L E+ + ++YTT++ K +R KL E+++ K
Sbjct: 758 RLCKEGRLDEASSLLSEMDT---LRDEVSYTTVIIGLCKAEQLDRASKLAREMVAV---K 811
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G + +I AF K RL EA + MV G +++YN +I CK K++ A
Sbjct: 812 GLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKA 871
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
+ L DEM +G ++T+LI GLC G K A LE M
Sbjct: 872 WELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 913
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 118/281 (41%), Gaps = 40/281 (14%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE-- 59
L+ +C+ FD IL M +AG+ PD VTYN+LI+G ++ + L + +L+ EML
Sbjct: 649 LMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNG 708
Query: 60 ----------------------------------MGIPPDVWSYNSLMHCLFQLGKPDEA 85
G+ + +YN + L + G+ DEA
Sbjct: 709 CVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEA 768
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK-HGFVPELVTYNILIK 144
+ + +M D ++ ++ GLCK D A ++ R + G T+N+LI
Sbjct: 769 SSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLID 825
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
K RL A +L + G +P+ ITY ++ C + K E+ M +G
Sbjct: 826 AFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVA 885
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
Y +I GR KEA +E+M + ++D + +
Sbjct: 886 SSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKWE 926
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/378 (31%), Positives = 195/378 (51%), Gaps = 6/378 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D +C+ D ++ +M E G P+ +TYN+++ G L +L L EM E G
Sbjct: 155 LVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESG 214
Query: 62 -IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PPDV++Y++++ L + GK D+A R+ + M+ +P T++ +L+GLCK D A
Sbjct: 215 SCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEA 274
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + + G P +VTYN +I G CK GR+ A +L+E+ D G PN +TYT ++
Sbjct: 275 TALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDA 334
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + + ++ M KGY + F Y +++ F K ++ A + M+ G +
Sbjct: 335 FCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPN 394
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+VSYNT+I CK K+ LLL++M D T +ID +CK + A
Sbjct: 395 VVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFN 454
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-----DSFTYSSMVHNLCKA 355
+ + G NL YN +V L K + D A + M K D TY++++ LCK+
Sbjct: 455 LIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKS 514
Query: 356 KRLPSASKLLLSCLKSGV 373
KR+ A KL L L G+
Sbjct: 515 KRVDRAYKLFLQMLSDGL 532
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 195/364 (53%), Gaps = 5/364 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
PD VTYN++I G +++ L ++ LL+EM++ G P+V+SYN+++H + + + A +
Sbjct: 42 PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWL 101
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
+ M+ P ++ ++NGLCK D A R+ + + G P ++TY L+ G C+
Sbjct: 102 LEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCR 161
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY-TFDGF 207
G L A +++++ + G+ PNAITY IM RK L++ M+ G D F
Sbjct: 162 VGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVF 221
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y T++ + VK G++ +A +E MV+ G ++V+Y++L++ CK GKL+ A LL M
Sbjct: 222 TYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM 281
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
+ G + T+ +IDG CK G I A LE M G N+ Y ++D K GK
Sbjct: 282 TRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKA 341
Query: 328 DHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
+ AI + E M V + FTY+S++ CK + A +LL S ++ G + V
Sbjct: 342 EDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTV 401
Query: 384 VDGL 387
+ GL
Sbjct: 402 IAGL 405
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 200/359 (55%), Gaps = 5/359 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
D +L M + G +P+V +YN+++ G + + + +L LL++M+ G PPDV SY +
Sbjct: 60 LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
+++ L +L + DEA RV MI P T+ +++G C+ D A+ + R + + G
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLG 190
+ P +TYN ++ GLC +L +A + KE+ +SG P+ TY+TI+ ++ K
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
++ AM KG + + Y +++ K G+L EAT +++M G +IV+YNT+I+
Sbjct: 240 CRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 299
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+CK G+++ AY LL+EM G + + T+T+L+D CK G + A +E M + G+ N
Sbjct: 300 HCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPN 359
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
L YN ++D K +++ A + SM V + +Y++++ LCKA ++ LL
Sbjct: 360 LFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLL 418
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 189/365 (51%), Gaps = 13/365 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+DA+C+ + ++ M E G P++ TYNSL+ + + + LL M++
Sbjct: 330 VLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQK 389
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V SYN+++ L + K E + + M+ + P TFN +++ +CK D A
Sbjct: 390 GCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIA 449
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG-DSGHAPNAITYTTIM- 178
+F +Q+ G P LVTYN L+ GLCK+ R A ++L+E+ G +P+ ITY T++
Sbjct: 450 YELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVID 509
Query: 179 ---KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
K +R YKL L++LS G D Y VI++ K + EA + +E M+ +
Sbjct: 510 GLCKSKRVDRAYKLFLQMLS----DGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKN 565
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G ++Y TLI+ +CK G L+ A +L + +G D T +I ID L K G ++ A
Sbjct: 566 GFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQA 625
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHN 351
LE M + G + YN ++ + + A+++FE M D+ TY+++V +
Sbjct: 626 GELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGH 685
Query: 352 LCKAK 356
L K
Sbjct: 686 LVDKK 690
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 206/391 (52%), Gaps = 5/391 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ +C+ + +L +M G PDVV+Y ++I G + + + ++D+M++ G
Sbjct: 85 VLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRG 144
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +Y +L+ ++G D A + + M P T+N +++GLC R D+AL
Sbjct: 145 CQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSAL 204
Query: 122 RMFRGLQKHGFV-PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F+ +++ G P++ TY+ ++ L K+G++ A +++ + G +PN +TY++++
Sbjct: 205 QLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHG 264
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K +L M R G + + Y T+I K+GR+ EA +E+MV G Q +
Sbjct: 265 LCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPN 324
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+Y L++ +CK GK E A L++ M ++G+ + +T+ L+D CK ++ A L
Sbjct: 325 VVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLS 384
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + G N+ +YN ++ L K K+ + + E M V D T+++++ +CK
Sbjct: 385 SMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTY 444
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
R+ A +L +SG ++V GL
Sbjct: 445 RVDIAYELFNLIQESGCTPNLVTYNSLVHGL 475
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 74/152 (48%), Gaps = 5/152 (3%)
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
+ +++ C G+ A L EM K D T+ +I+GL K+ + A LE M
Sbjct: 13 HKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMV 71
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLP 359
GF N+ +YN ++ K ++++A+ + E M ++ D +Y+++++ LCK ++
Sbjct: 72 DNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVD 131
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
A +++ ++ G + +VDG G
Sbjct: 132 EACRVMDKMIQRGCQPNVITYGTLVDGFCRVG 163
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 215/415 (51%), Gaps = 7/415 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C+ D +L+RMR SPD VTYN +I L +L +L+++L
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN 223
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y L+ G DEA ++ +M+ L P T+N ++ G+CK D A
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M R L+ G P++++YNIL++ L G+ ++ ++ PN +TY+ ++
Sbjct: 284 EMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ K + + +L MK KG T D + Y +IAAF + GRL A +++E M++DG DI
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHLE 300
V+YNT++ CK GK + A + ++ + G + ++ + L +G+ I+ + LE
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDS-FTYSSMVHNLCKAK 356
M+ G D + YN ++ L ++G +D A + M E S TY+ ++ CKA
Sbjct: 464 MMSN-GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 522
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK-IRMAKISH 410
R+ A +L S + +G R ++ +++G+ +G R EA ++ + +R+ IS
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISE 577
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 162/325 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+A D +++ M G+ PD+ TYN++I G + ++ + +++ +
Sbjct: 233 ILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELK 292
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV SYN L+ L GK +E ++ M P T++I++ LC++ + A
Sbjct: 293 GSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEA 352
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + +++ G P+ +Y+ LI C+ GRL A L+ + G P+ + Y T++
Sbjct: 353 MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLAT 412
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+N K LEI + G + + Y T+ +A G A + +M+++G+ D
Sbjct: 413 LCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPD 472
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++YN++I+ C+EG ++ A+ LL +M F T+ I++ G CKA I+ A LE
Sbjct: 473 EITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLE 532
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDG 325
M G N Y +++ +G G
Sbjct: 533 SMVGNGCRPNETTYTVLIEGIGFAG 557
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 118/243 (48%), Gaps = 4/243 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ + +L M+E G++PD +Y+ LIA R L +++ L+ M+
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN+++ L + GK D+A +F + +P ++++N M + L + A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L M + +G P+ +TYN +I LC+ G + A +L ++ P+ +TY ++
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 517
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + + +L +M G + Y +I G EA ++ D V++D
Sbjct: 518 FCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAM----ELANDLVRID 573
Query: 241 IVS 243
+S
Sbjct: 574 AIS 576
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 215/415 (51%), Gaps = 7/415 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C+ D +L+RMR SPD VTYN +I L +L +L+++L
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN 223
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y L+ G DEA ++ +M+ L P T+N ++ G+CK D A
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M R L+ G P++++YNIL++ L G+ ++ ++ PN +TY+ ++
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ K + + +L MK KG T D + Y +IAAF + GRL A +++E M++DG DI
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHLE 300
V+YNT++ CK GK + A + ++ + G + ++ + L +G+ I+ + LE
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDS-FTYSSMVHNLCKAK 356
M+ G D + YN ++ L ++G +D A + M E S TY+ ++ CKA
Sbjct: 464 MMSN-GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 522
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK-IRMAKISH 410
R+ A +L S + +G R ++ +++G+ +G R EA ++ + +R+ IS
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISE 577
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 162/325 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+A D +++ M G+ PD+ TYN++I G + ++ + +++ +
Sbjct: 233 ILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELK 292
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV SYN L+ L GK +E ++ M P T++I++ LC++ + A
Sbjct: 293 GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEA 352
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + +++ G P+ +Y+ LI C+ GRL A L+ + G P+ + Y T++
Sbjct: 353 MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLAT 412
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+N K LEI + G + + Y T+ +A G A + +M+++G+ D
Sbjct: 413 LCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPD 472
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++YN++I+ C+EG ++ A+ LL +M F T+ I++ G CKA I+ A LE
Sbjct: 473 EITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLE 532
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDG 325
M G N Y +++ +G G
Sbjct: 533 SMVGNGCRPNETTYTVLIEGIGFAG 557
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 118/243 (48%), Gaps = 4/243 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ + +L M+E G++PD +Y+ LIA R L +++ L+ M+
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN+++ L + GK D+A +F + +P ++++N M + L + A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L M + +G P+ +TYN +I LC+ G + A +L ++ P+ +TY ++
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 517
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + + +L +M G + Y +I G EA ++ D V++D
Sbjct: 518 FCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAM----ELANDLVRID 573
Query: 241 IVS 243
+S
Sbjct: 574 AIS 576
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 207/395 (52%), Gaps = 4/395 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ YC+ + + ++ M G PD T+NSL+ G R + +L++LD ML+
Sbjct: 286 VLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQE 345
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+++YNSL+ L +LG+ +EA + MI D +P T T+N +++ LCK + A
Sbjct: 346 GFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEA 405
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ R L G +P++ T+N LI+GLC R A + +E+ G P+ TY ++
Sbjct: 406 TELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDS 465
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + L +L M+ G + + Y T+I F K R++EA + ++M G+ +
Sbjct: 466 LCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRN 525
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YNTLI+ CK ++E A L+D+M +G + DK+T+ L+ C+AG+IK A ++
Sbjct: 526 VVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQ 585
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAK 356
M G + + Y ++ L K G+++ A + ++++K TY+ ++ L + K
Sbjct: 586 TMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREK 645
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
R A +L ++ G K V GL G
Sbjct: 646 RTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGG 680
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 205/438 (46%), Gaps = 39/438 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI A C+ ++ M G+SPD T+ +L+ G ++ +L + ++M+
Sbjct: 216 ILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAA 275
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P + N L+H + G+ +E +M P TFN ++NGLC+ + +A
Sbjct: 276 GCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHA 335
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK- 179
L + + + GF P++ TYN LI GLCK G + A IL ++ +PN +TY T++
Sbjct: 336 LEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLIST 395
Query: 180 --------------------------CCFRN--------RKYKLGLEILSAMKRKGYTFD 205
C F + ++L +E+ MK KG D
Sbjct: 396 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPD 455
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
F Y +I + GRL+EA +++M + G ++V+YNTLI+ +CK ++E A + D
Sbjct: 456 EFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFD 515
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EME QG + T+ LIDGLCK ++ A ++ M G + YN ++ + G
Sbjct: 516 EMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAG 575
Query: 326 KIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
I A ++ ++M DS TY +++ L KA R+ AS+LL + G+ +
Sbjct: 576 DIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYN 635
Query: 382 AVVDGLRHSGCRREAKKI 399
V+ L EA ++
Sbjct: 636 PVIKALFREKRTSEAVRL 653
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 188/359 (52%), Gaps = 4/359 (1%)
Query: 20 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 79
+RM GI PDV T+N LI R + ++ +++EM G+ PD ++ +LM +
Sbjct: 200 SRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEE 259
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
G + A R+ + M+ T N++++G CK + L + GF P+ T+
Sbjct: 260 GNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTF 319
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
N L+ GLC+ G ++ A IL + G P+ TY +++ + + + +EIL+ M
Sbjct: 320 NSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMIL 379
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
+ ++ + Y T+I+ K +++EAT+ + + G+ D+ ++N+LI C
Sbjct: 380 RDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRL 439
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A L +EM+ +G D++T+ +LID LC G ++ A L+ M G N+ YN ++D
Sbjct: 440 AMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLID 499
Query: 320 RLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
K+ +I+ A +F+ ME+ ++ TY++++ LCK +R+ A++L+ L G++
Sbjct: 500 GFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLK 558
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 161/342 (47%), Gaps = 6/342 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLD-EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
P T L R S LDLLD + P Y ++ L + G R
Sbjct: 67 PQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRR 126
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH-GFVPELVTYNILIKGL 146
V Q+M TF I++ K D A+ + +++ G + TYN L+ L
Sbjct: 127 VLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVL 186
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
+L+ + + G P+ T+ ++K R + + + ++ M G + D
Sbjct: 187 VDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDE 246
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ T++ F++ G + A EQMV G V+ N L++ YCKEG++E +DE
Sbjct: 247 KTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDE 306
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M +GF D++T L++GLC+ G++K A L+ M + GFD ++ YN ++ L K G+
Sbjct: 307 MSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGE 366
Query: 327 IDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKL 364
++ A+ + M ++D + TY++++ LCK ++ A++L
Sbjct: 367 VEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATEL 408
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 134/287 (46%), Gaps = 1/287 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + + M+ G PD TYN LI L +L LL EM G
Sbjct: 427 LIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSG 486
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+V +YN+L+ + + +EA +F +M ++ T+N +++GLCKNR + A
Sbjct: 487 CSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAA 546
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + G P+ TYN L+ C+AG ++ A I++ + +G P+++TY T++
Sbjct: 547 QLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGL 606
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + +L +L ++ KG Y VI A + R EA +M+ G D
Sbjct: 607 SKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDA 666
Query: 242 VSYNTLINLYCKEG-KLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
V+Y + C G + A L EM +GF D + +L +GLC
Sbjct: 667 VTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLC 713
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP-DEANRVFQD 91
TYN +I R S ++ L EM+E G PPD +Y + L G P EA +
Sbjct: 633 TYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVE 692
Query: 92 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
M P ++F ++ GLC D +++ + K
Sbjct: 693 MTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQA 732
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 215/415 (51%), Gaps = 7/415 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C+ D +L+RMR SPD VTYN +I L +L +LD++L
Sbjct: 160 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDN 219
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y L+ G DEA ++ +M+ L P T+N ++ G+CK D A
Sbjct: 220 CQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 279
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M R L+ G P++++YNIL++ L G+ ++ ++ PN +TY+ ++
Sbjct: 280 EMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 339
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ K + + +L MK KG T D + Y +IAAF + GRL A +++E M++DG DI
Sbjct: 340 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 399
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHLE 300
V+YNT++ CK GK + A + ++ + G + ++ + L +G+ I+ + LE
Sbjct: 400 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 459
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDS-FTYSSMVHNLCKAK 356
++ G D + YN ++ L ++G +D A + M E S TY+ ++ CKA
Sbjct: 460 MVSN-GIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 518
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK-IRMAKISH 410
R+ A +L S + +G R ++ +++G+ +G R EA ++ + +R+ IS
Sbjct: 519 RIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINAISE 573
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 162/325 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+A D +L+ M G+ PD+ TYN++I G + ++ + +++ +
Sbjct: 229 ILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELK 288
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV SYN L+ L GK +E ++ M P T++I++ LC++ + A
Sbjct: 289 GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEA 348
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + +++ G P+ +Y+ LI C+ GRL A L+ + G P+ + Y T++
Sbjct: 349 MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLAT 408
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+N K LEI + G + + Y T+ +A G A + +MV++G+ D
Sbjct: 409 LCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPD 468
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++YN++I+ C+EG ++ A+ LL +M F T+ I++ G CKA I+ A L+
Sbjct: 469 EITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLD 528
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDG 325
M G N Y +++ +G G
Sbjct: 529 SMVGNGCRPNETTYTVLIEGIGFAG 553
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 119/243 (48%), Gaps = 4/243 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ + +L M+E G++PD +Y+ LIA R L +++ L+ M+
Sbjct: 334 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 393
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN+++ L + GK D+A +F + +P ++++N M + L + A
Sbjct: 394 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 453
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L M + +G P+ +TYN +I LC+ G + A +L ++ P+ +TY ++
Sbjct: 454 LHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLG 513
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + +++L +M G + Y +I G EA ++ D V+++
Sbjct: 514 FCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAM----ELANDLVRIN 569
Query: 241 IVS 243
+S
Sbjct: 570 AIS 572
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 216/410 (52%), Gaps = 14/410 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ + +L +M E G P+VV YN++I ++ L++ ++D EM++ G
Sbjct: 51 IINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEG 110
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
IPPDV++Y+S++H LG+ +EA +F+ M+ ++ P TF I+++GLCK R A
Sbjct: 111 IPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAW 170
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + + G P++ TYN L+ G C ++ A+ + + G APN +Y ++
Sbjct: 171 LVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGH 230
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + +L+ M K T D F Y T++ F ++GR +EA + +++M + G+ ++
Sbjct: 231 CKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNL 290
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y+ +++ CK G L+ A+ LL M++ E + + +TILI+G+C G ++ AR
Sbjct: 291 ITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSN 350
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
+ G + Y ++ L K G + A +F M V +S TY+ ++ +
Sbjct: 351 LFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGD 410
Query: 358 LPSASKLL-------LSCLKSGVRI---LKSAQKAVVDGLRHSGCRREAK 397
P+A +L+ S S R+ L+S+ + + +R S R+ K
Sbjct: 411 TPNAVRLIEEMVGKGFSADSSTFRMLSDLESSDEIISQFMRGSSQDRKTK 460
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 190/379 (50%), Gaps = 4/379 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M + G+ P +VT+N+L++G + + ++ L DEM++MG PDV +Y+++++ L ++G
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
A ++ + M P +N +++ LCK+R A+ F + K G P++ TY+
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
++ G C GR+ A + K++ + PN +T+T ++ + R + M KG
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
D + Y ++ + ++ EA M G ++ SYN LIN +CK G+++ A
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
LL EM + D +T++ L+ G C+ G + A+ L+ M G NL Y+ ++D L
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300
Query: 322 GKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
K G +D A + ++M+ + F Y+ ++ +C +L +A +L + G++
Sbjct: 301 CKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTV 360
Query: 378 SAQKAVVDGLRHSGCRREA 396
++ GL G EA
Sbjct: 361 VTYTVMISGLLKGGLSNEA 379
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 139/284 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ + + M E G+ PDV TYN+L+ G S + + L + M
Sbjct: 155 ILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRK 214
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V SYN L++ + G+ DEA + +M LTP T++ ++ G C+ A
Sbjct: 215 GCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEA 274
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + +G +P L+TY+I++ GLCK G L A +LK + +S PN YT +++
Sbjct: 275 QELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEG 334
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K + E+ S + KG Y +I+ +K G EA + +M +G +
Sbjct: 335 MCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPN 394
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
+YN +I + + G A L++EM +GF D T +L D
Sbjct: 395 SCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRMLSD 438
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 91/204 (44%), Gaps = 41/204 (20%)
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G+Q +V++NTL++ C + K+ A L DEM K G E D T++ +I+GLCK GN A
Sbjct: 5 GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-----DSFTYSS--- 347
L+ M + G N+ AYN I+D L KD + A++ F M VK D FTYSS
Sbjct: 65 LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEM-VKEGIPPDVFTYSSILH 123
Query: 348 --------------------------------MVHNLCKAKRLPSASKLLLSCLKSGVRI 375
++ LCK + + A + + + G+
Sbjct: 124 GFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEP 183
Query: 376 LKSAQKAVVDGLRHSGCRREAKKI 399
A+VDG EA+K+
Sbjct: 184 DVYTYNALVDGYCSRSQMDEAQKL 207
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 213/411 (51%), Gaps = 4/411 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C + + + +M + G P+VVTYN++I ++ L++ ++D L EM+ G
Sbjct: 204 LINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRG 263
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
IPPD +YNS++H L LG+ +EA R+F+ M P T+NI+++ L K+R ++A
Sbjct: 264 IPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAA 323
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ G P++VTY ++ GLC G+L A + K++ G P+ + Y TI+
Sbjct: 324 DFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSL 383
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++R +E LS M +G + Y T++ F +G+L EAT ++MV V +
Sbjct: 384 CKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNT 443
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++++ L++ C+EG + A + + M ++G E + YT+ L++G C + AR E
Sbjct: 444 LTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEI 503
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G +L +YN +++ ++D A + M VK ++ TY++++ LC R
Sbjct: 504 MVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGR 563
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
L A +L SG+ +++GL G EA K+ ++ K+
Sbjct: 564 LLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKL 614
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 210/442 (47%), Gaps = 39/442 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ D ++ +M + GI PDV+T+ +LI G + +++L +EM+
Sbjct: 133 ILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRS 192
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV SYN+L++ L G + A VF+ M P T+N +++ LCK+R ++A
Sbjct: 193 GHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDA 252
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P+ +TYN ++ GLC G+L A + K + +G P+ +TY I+
Sbjct: 253 MDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDS 312
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+++R + LS M +G D Y T++ +G+L EA ++M G + D
Sbjct: 313 LYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPD 372
Query: 241 IVSYNTLINLYCKE-----------------------------------GKLEAAYLLLD 265
+V+YNT+I+ CK+ G+L+ A L
Sbjct: 373 VVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFK 432
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM + + T +IL+DGLC+ G + AR E M + G + N+ YN +++
Sbjct: 433 EMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRC 492
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
K++ A VFE M K D +Y+ +++ C ++R+ A LL +
Sbjct: 493 KMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYN 552
Query: 382 AVVDGLRHSGCRREAKKIQSKI 403
++ GL + G +A+++ K+
Sbjct: 553 TIMKGLCYVGRLLDAQELFKKM 574
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 188/394 (47%), Gaps = 4/394 (1%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
+S D RM P +V + + + S + L ++M G+ V+S
Sbjct: 72 ISVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSL 131
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N L++CL +L D A V+ M + P TF ++NG+C A+ ++ + +
Sbjct: 132 NILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVR 191
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G P++++YN LI GLC +G A + K++ +G PN +TY TI+ ++R
Sbjct: 192 SGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVND 251
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
++ LS M +G D Y +++ +G+L EAT ++M +G + D+V+YN +I+
Sbjct: 252 AMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIID 311
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
K+ + A L EM QG D T+T ++ GLC G + A + M + G
Sbjct: 312 SLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKP 371
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
++ AYN I+D L KD ++ A+ M + ++ TYS+++H C +L A++L
Sbjct: 372 DVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLF 431
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ V +VDGL G EA+ +
Sbjct: 432 KEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWV 465
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 177/333 (53%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ C + + +M + G PDVV YN++I ++ L++ +++ L EM++ G
Sbjct: 344 ILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRG 403
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
IPP+ +Y++++H LG+ DEA ++F++M+ ++ P T TF+I+++GLC+ A
Sbjct: 404 IPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEAR 463
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + + G P + TYN L+ G C ++ AR + + + G AP+ +Y ++
Sbjct: 464 WVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGY 523
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+R+ +L+ M K T + Y T++ +GRL +A + ++M + G+ +
Sbjct: 524 CNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTL 583
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y+ L+N CK G L+ A L M+++ E D +TILI+G+ G ++ A+
Sbjct: 584 MTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSK 643
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
++ G YN ++ L K+G D A +F
Sbjct: 644 LSADGIQPPGRTYNVMIKGLLKEGLSDEAYELF 676
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 109/225 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D CQ + M E G+ P++ TYN+L+ G ++ + + + M+
Sbjct: 448 ILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGK 507
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ SYN L++ + D+A + M LTP T T+N ++ GLC +A
Sbjct: 508 GCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDA 567
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ + G +P L+TY+IL+ GLCK G L A + K + + P+ I YT +++
Sbjct: 568 QELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEG 627
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
F K ++ + S + G G Y +I +K G EA
Sbjct: 628 MFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEA 672
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ C+ D + M+E + PD++ Y LI G L + L ++
Sbjct: 588 ILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSAD 647
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 90
GI P +YN ++ L + G DEA +F+
Sbjct: 648 GIQPPGRTYNVMIKGLLKEGLSDEAYELFR 677
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 126/397 (31%), Positives = 205/397 (51%), Gaps = 15/397 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D C+ F+ +++L M E P TYN+LI+G + + + L+DE + G
Sbjct: 51 IMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSG 110
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV +Y+ L L + G+ DEA + ++M TP T+N +++GLCK T+ A
Sbjct: 111 FVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAY 170
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L GFVP++VTY I++ GLCK GRL A +++ + G P+ ITYT +M+
Sbjct: 171 ELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGL 230
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ--- 238
R + I M K T D Y +++ + K R KEA Q V DG++
Sbjct: 231 CRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA-----QKVVDGIRGTP 285
Query: 239 -LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+D+ YN L++ YCKEG+L+ + ++M +G + T+ I++DGLCK G + A
Sbjct: 286 YIDV--YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFP 343
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 353
LE M+ G ++ +YN I+D L K K A V + M D+ TY++++ C
Sbjct: 344 FLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFC 403
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
K +R A +L + +K+GV ++ GL +
Sbjct: 404 KEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQT 440
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 203/391 (51%), Gaps = 7/391 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M E ++PDV TYN LI G + S + ++L EM++ G+ PD ++NS+M L + GK
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
+ A+ + M + P T+N +++GLCK + D A + GFVP++VTY+I
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
L GLCK GR+ A ++KE+ +G PN +TY T++ + K + E+L + G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ D Y ++ K GRL +A +E M+ G +++Y L+ C+ G+++ A+
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+ EM + D + L++G CK+ K A+ + ++ I ++ YN ++D
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQ---KVVDGIRGTPYIDVYNALMDGY 297
Query: 322 GKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
K+G++D NVFE M V + TY+ ++ LCK ++ A L S +G
Sbjct: 298 CKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDV 357
Query: 378 SAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+ ++DGL + +EA+++ ++ A I
Sbjct: 358 VSYNIIIDGLFKASKPKEARQVLDQMIQAGI 388
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 183/367 (49%), Gaps = 44/367 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ D + I M + D + Y SL+ G ++S + ++D G
Sbjct: 226 LMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD-----G 280
Query: 62 I--PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
I P + YN+LM + G+ DE VF+DM C P T+NI+++GLCK+ D
Sbjct: 281 IRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDE 340
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + G VP++V+YNI+I GL KA + + AR +L ++ +G P+A+TY T+M
Sbjct: 341 AFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMA 400
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ ++ + IL M + G D Y T+I+ + RL +A + M +M+ +G +
Sbjct: 401 QFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVV 460
Query: 240 DI-VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+YNT+I+ CKEG L+ A LL+D M G E + T+ I ID LC
Sbjct: 461 SACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLC----------- 509
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-VKDSFTYSSMVHNLCKAKR 357
K+G++D A ++ M+ ++D +Y++++ LCKA++
Sbjct: 510 ------------------------KEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQ 545
Query: 358 LPSASKL 364
L ASKL
Sbjct: 546 LDRASKL 552
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 157/342 (45%), Gaps = 46/342 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D C+ D + L M AG PDVV+YN +I G + S + +LD+M++
Sbjct: 327 IVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQA 386
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG---------- 110
GIPPD +YN+LM + + D+A + ++MI + P T+N +++G
Sbjct: 387 GIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDA 446
Query: 111 --------------------------LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
LCK AL + + HG VTYNI I
Sbjct: 447 YELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFID 506
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIM----KCCFRNRKYKLGLEILSAMKRK 200
LCK GRL A +L E+ + ++YTT++ K +R KL E+++ K
Sbjct: 507 RLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAV---K 560
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G + +I AF K RL EA +E MV G +++YN +I CK K++ A
Sbjct: 561 GLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKA 620
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
+ L DEM +G ++T+LI GLC G K A LE M
Sbjct: 621 WELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 662
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 127/303 (41%), Gaps = 40/303 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE-- 59
L+ +C+ FD IL M +AG+ PD VTYN+LI+G ++ + L + +L+ EML
Sbjct: 398 LMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNG 457
Query: 60 ----------------------------------MGIPPDVWSYNSLMHCLFQLGKPDEA 85
G+ + +YN + L + G+ DEA
Sbjct: 458 CVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEA 517
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK-HGFVPELVTYNILIK 144
+ + +M D ++ ++ GLCK D A ++ R + G T+N+LI
Sbjct: 518 SSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLID 574
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
K RL A +L+ + G +P+ ITY ++ C + K E+ M +G
Sbjct: 575 AFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVA 634
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
Y +I GR KEA +E+M + ++D + L +G+ E A LL
Sbjct: 635 SSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELL 694
Query: 265 DEM 267
M
Sbjct: 695 RRM 697
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 208/407 (51%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ A + FD + ++M GIS D+ ++ LI R S S +L LL +M+++G
Sbjct: 621 VLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLG 680
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + + SL++ Q + EA + M L P +N ++NGLCKNR +NAL
Sbjct: 681 FQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNAL 740
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F G++K G V + VTYN LI GLC +GR A +L+++ PN I +T ++
Sbjct: 741 EIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 800
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + M R+ + Y ++I F GRL +A + MV+ G D+
Sbjct: 801 VKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDV 860
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTLI +CK ++E L EM QG D +T+ LI G C+AG + A+
Sbjct: 861 VTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 920
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G ++ YN ++D L +GKI+ A+ + E ++ D TY+ ++ +C+ +
Sbjct: 921 MVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDK 980
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A L S + GV++ A ++ GL +G RREA K+ ++++
Sbjct: 981 VKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMK 1027
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 183/350 (52%), Gaps = 1/350 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ +CQ F ++++ M E G+ P+VV YN++I G +N L+ +L++ M + G
Sbjct: 691 LLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKG 750
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I D +YN+L+ L G+ +A R+ +DM+ + P F +++ K A
Sbjct: 751 IVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAK 810
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + + P ++TYN LI G C GRL A+ + + G P+ +TY T++
Sbjct: 811 NLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGF 870
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++++ + G+++ M +G D F Y T+I + + G+L A +MV GV DI
Sbjct: 871 CKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDI 930
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN L++ C GK+E A +++++++K + D T+ I+I G+C+ +K A
Sbjct: 931 VTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRS 990
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHN 351
+ + G + AY ++ L ++G A + M+ +D F S +++
Sbjct: 991 LTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMK-EDGFMPSERIYD 1039
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 188/390 (48%), Gaps = 5/390 (1%)
Query: 20 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 79
+M GIS D+ ++ LI R S LS +L +L +M+++G P + ++ SL+H
Sbjct: 89 QQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLR 148
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG-FVPELVT 138
+ +A + M+ P +N +++ LCKN + AL + ++K G +LVT
Sbjct: 149 NRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVT 208
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
YN L+ GLC +G R A IL+++ P+ T+T ++ + E+ M
Sbjct: 209 YNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQML 268
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
+ + Y ++I GRL A + M + G ++V+YNTLIN +CK ++E
Sbjct: 269 QSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVE 328
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
L M ++G D +T+ LI G C+ G ++ A+ +M G ++ + ++
Sbjct: 329 DGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILL 388
Query: 319 DRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
L +G+I A+ F M + + Y+ M+H LCKA ++ A +L GV+
Sbjct: 389 HGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVK 448
Query: 375 ILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++ GL +G RREA ++ +++
Sbjct: 449 PDARTYTIMILGLCKNGPRREADELFRRMK 478
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 179/379 (47%), Gaps = 7/379 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C+ +IL +M + G P +VT+ SL+ G + + + L+ M++
Sbjct: 105 ILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKS 164
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTDN 119
G P+V YN+L+ CL + G + A + +M G L T+N +L GLC +
Sbjct: 165 GYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQ 224
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A R+ R + K P++ T+ LI K G L A+ + K++ S PN +TY +++
Sbjct: 225 AARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLIN 284
Query: 180 -CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
C R Y + M KG + Y T+I F K R+++ ++M +G+
Sbjct: 285 GLCMHGRLYH-AKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLV 343
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D +YNTLI+ YC+ GKL A + M G D TH IL+ GLC G I A +
Sbjct: 344 GDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVK 403
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
M + AYN ++ L K K++ A +F + V+ D+ TY+ M+ LCK
Sbjct: 404 FNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCK 463
Query: 355 AKRLPSASKLLLSCLKSGV 373
A +L + G+
Sbjct: 464 NGPRREADELFRRMKEDGI 482
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 157/329 (47%), Gaps = 5/329 (1%)
Query: 50 SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 109
+LDL EM++ P V + L+ + L + + Q M ++ +F I+++
Sbjct: 49 ALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIH 108
Query: 110 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 169
C+ AL + + K G+ P +VT+ L+ G C R+ A ++ + SG+ P
Sbjct: 109 CFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEP 168
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-YTFDGFGYCTVIAAFVKIGRLKEATDY 228
N + Y T++ C +N + LE+L+ M++KG D Y T++ G ++A
Sbjct: 169 NVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARI 228
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+ M + D+ ++ LI+ + K+G L+ A L +M + + T+ LI+GLC
Sbjct: 229 LRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCM 288
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 344
G + A+ + M G N+ YN +++ K +++ + +F+ M V D+FT
Sbjct: 289 HGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFT 348
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
Y++++H C+ +L A + + GV
Sbjct: 349 YNTLIHGYCQVGKLRVAKDIFSWMVSCGV 377
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 133/279 (47%), Gaps = 12/279 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C + IL M + I+PDV T+ +LI + L + +L +ML+
Sbjct: 212 LLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSS 271
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+ +YNSL++ L G+ A + F M P T+N ++NG CK+R ++ +
Sbjct: 272 IGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGM 331
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F+ + + G V + TYN LI G C+ G+LR A+ I + G P+ IT+ ++
Sbjct: 332 KLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGL 391
Query: 182 FRNRKYKLGLEILSAM-----KRKGYTFDGF-GYCTVIAAFVKIGRLKEATDYMEQMVTD 235
N EI SAM R G + G Y +I K +++EA + ++ +
Sbjct: 392 CVNG------EIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVE 445
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
GV+ D +Y +I CK G A L M++ G C
Sbjct: 446 GVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIIC 484
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/470 (23%), Positives = 190/470 (40%), Gaps = 63/470 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C+ + G + RM G+ D TYN+LI G + L + D+ M+ G
Sbjct: 317 LINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCG 376
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ ++ L+H L G+ A F DM G+ +NIM++GLCK + A
Sbjct: 377 VTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAW 436
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL--------GDSGH-----A 168
+F L G P+ TY I+I GLCK G R A + + + + GH
Sbjct: 437 ELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAEDGHLGEHGT 496
Query: 169 PNAITYTTIMKCCFRNRKYK------------------LGL-EILSAMKRKGY------- 202
N ++ TI+ C R R +GL I S+ KG+
Sbjct: 497 NNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIASSSSVKGFVRRHLLL 556
Query: 203 ----------TFDGFG----------YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+F G Y + + + + +A +M+ IV
Sbjct: 557 LERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIV 616
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
+ ++ K K + L +ME G D Y+ TILI C+ A L M
Sbjct: 617 DFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKM 676
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRL 358
K+GF ++ +++ + + A+++ +SM + Y+++++ LCK + L
Sbjct: 677 MKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDL 736
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+A ++ K G+ ++ GL +SG +A ++ + KI
Sbjct: 737 NNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKI 786
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 124/251 (49%), Gaps = 5/251 (1%)
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
++AL +F + + +P +V + L+ + R T + +++ G + + ++T +
Sbjct: 47 EDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTIL 106
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ C R + L L IL M + GY + +++ F R+ +A + MV G
Sbjct: 107 IHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGY 166
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG-FECDKYTHTILIDGLCKAGNIKGAR 296
+ ++V YNTLI+ CK G + A LL+EMEK+G D T+ L+ GLC +G + A
Sbjct: 167 EPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAA 226
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
L M K + ++ + ++D K G +D A +++ M ++ TY+S+++ L
Sbjct: 227 RILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGL 286
Query: 353 CKAKRLPSASK 363
C RL A K
Sbjct: 287 CMHGRLYHAKK 297
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 4/196 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ + G + M G+ D TYN+LI G + L+ + + + M++ G
Sbjct: 866 LITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 925
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+PPD+ +YN L+ CL GK ++A + +D+ + T+NI++ G+C+N A
Sbjct: 926 VPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAW 985
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR L + G + + Y +I GLC+ G R A + + + G P+ Y +
Sbjct: 986 CLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETL--- 1042
Query: 182 FRNRKYKLGLEILSAM 197
R+ L E++ A+
Sbjct: 1043 -RDHYTSLSAELIKAV 1057
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 117/259 (45%), Gaps = 5/259 (1%)
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
G + R A + E+ S P+ + +T ++ R+Y+ + M+ G +
Sbjct: 39 GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D + + +I F + RL A + +M+ G IV++ +L++ +C ++ A+ L+
Sbjct: 99 DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG-FDSNLEAYNCIVDRLGK 323
M K G+E + + LID LCK G++ A L M K G ++L YN ++ L
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCY 218
Query: 324 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
G+ A + M + D FT+++++ K L A +L L+S +
Sbjct: 219 SGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVT 278
Query: 380 QKAVVDGLRHSGCRREAKK 398
++++GL G AKK
Sbjct: 279 YNSLINGLCMHGRLYHAKK 297
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 186/362 (51%), Gaps = 4/362 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ N M GI PDVVT N+LI R + ++ +L+EM G+ PD ++ +LM
Sbjct: 183 SVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGF 242
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ G + A RV M+ +P T N+++NG CK ++AL + GF P+
Sbjct: 243 IEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQ 302
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
VTYN + GLC+ G + A ++ + GH P+ TY T++ C +N + I++
Sbjct: 303 VTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQ 362
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M +G D + T+I A RL+EA D ++ G+ D+ ++N LIN CK G
Sbjct: 363 MVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGD 422
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
L +EM+ G D+ T+ ILID LC G + A L M G + YN
Sbjct: 423 PHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNT 482
Query: 317 IVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
I+D L K +I+ A VF+ M+ + + T+++++ LCKAKR+ A++L+ +K G
Sbjct: 483 IIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEG 542
Query: 373 VR 374
++
Sbjct: 543 LQ 544
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 206/431 (47%), Gaps = 40/431 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ + + + G PD VTYN+ + G +N +S +L ++D ML+
Sbjct: 272 VLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQE 331
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV++YN++++CL + G+ DEA + M+ P T TFN ++ L + A
Sbjct: 332 GHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEA 391
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN---------- 170
L + R L G P++ T+NILI LCK G + +E+ SG P+
Sbjct: 392 LDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDH 451
Query: 171 -------------------------AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
+TY TI+ + + + E+ M +G +
Sbjct: 452 LCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRS 511
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ T+I K R+ +AT+ +EQMV +G+Q + ++YN+++ YCK+G ++ A +L+
Sbjct: 512 AVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILE 571
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M GFE D T+ LI+GLCKAG + A L M G +AYN ++ L +
Sbjct: 572 TMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRN 631
Query: 326 KIDHAINVFESM----EVKDSFTYSSMVHNLCK-AKRLPSASKLLLSCLKSGVRILKSAQ 380
+ A+N+F M E D+ TY + +LC+ + A L+ + G S+
Sbjct: 632 NLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSF 691
Query: 381 KAVVDGLRHSG 391
+ + +GL + G
Sbjct: 692 RMLAEGLLNLG 702
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 187/399 (46%), Gaps = 4/399 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ + + S +A + +M EAG SP VT N LI G + + +L + + + G
Sbjct: 238 LMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADG 297
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +YN+ +H L Q G A +V M+ P T+N ++N L KN D A
Sbjct: 298 FEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAK 357
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G +P+ T+N LI L RL A + +EL G +P+ T+ ++
Sbjct: 358 GIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINAL 417
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ LG+ + MK G T D Y +I +G+L A D + +M ++G
Sbjct: 418 CKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRST 477
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNT+I+ CK+ ++E A + D+M+ QG T LIDGLCKA I A +E
Sbjct: 478 VTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQ 537
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M K G N YN I+ K G I A ++ E+M D TY ++++ LCKA R
Sbjct: 538 MVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGR 597
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
A KLL G+R A V+ L R+A
Sbjct: 598 TQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDA 636
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 191/395 (48%), Gaps = 11/395 (2%)
Query: 2 LIDAYCQFVSFD-AGYTILNRMREA--GISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
+++Y + FD A +LN++ G+ D V +N L+ S L + +EM
Sbjct: 130 FVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMT 189
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
GI PDV + N+L+ L + + A + ++M + P TF ++ G + +
Sbjct: 190 GRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIE 249
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHAPNAITYTTI 177
ALR+ + + G P VT N+LI G CK GR+ A +I +E+ D G P+ +TY T
Sbjct: 250 AALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIAD-GFEPDQVTYNTF 308
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ +N L+++ M ++G+ D F Y TVI K G L EA + QMV G
Sbjct: 309 VHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGC 368
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK-GAR 296
D ++NTLI + +LE A L E+ +G D YT ILI+ LCK G+ G R
Sbjct: 369 LPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIR 428
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNL 352
L E M G + YN ++D L GK+ +A+++ ME + + TY++++ L
Sbjct: 429 L-FEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDAL 487
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
CK R+ A ++ G+ ++DGL
Sbjct: 488 CKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGL 522
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 139/306 (45%), Gaps = 10/306 (3%)
Query: 107 MLNGLCKNRYTDNALRMFR-GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
+L L + + ALRM L + F P Y +++ L AG +++E+
Sbjct: 59 LLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRRE 118
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLE-ILSAMKRK--GYTFDGFGYCTVIAAFVKIGRL 222
GH A+ + ++ R R++ ++ +L+ + G D + ++ V+ +L
Sbjct: 119 GHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKL 178
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
K +M G+Q D+V+ NTLI C+ ++ A L+L+EM G D+ T T L
Sbjct: 179 KLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTL 238
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS 342
+ G + G+I+ A M + G N +++ K G+++ A+ + E+ D
Sbjct: 239 MQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQ-EIADG 297
Query: 343 F-----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
F TY++ VH LC+ + A K++ L+ G V++ L +G EAK
Sbjct: 298 FEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAK 357
Query: 398 KIQSKI 403
I +++
Sbjct: 358 GIVNQM 363
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 128/374 (34%), Positives = 191/374 (51%), Gaps = 15/374 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C + RM +AG SPDVVTYN+L+ G + L +L + D ++ G
Sbjct: 16 LLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRG 75
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV +YN+L++ + K DEA R+ Q M+ +L P T+N ++NGLCKN D A
Sbjct: 76 FVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEA- 134
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD---SGHAPNAITYTTIM 178
RM + GF P ++TY+ LI GLC+ LR LK G G+ P TY ++
Sbjct: 135 RML--IVDKGFSPNVITYSTLISGLCR--ELRGVSEALKLFGSVLKQGYEPEVPTYNILI 190
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ + E+ S + + G D Y I K GR+++A ++ M G
Sbjct: 191 DGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCV 250
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D+VS+N +IN CKE +++ A +LL ME +G + + LI G C+AG K A
Sbjct: 251 PDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTT 310
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGK---DGKIDHAINVFESM----EVKDSFTYSSMVHN 351
+ M K G + YN +VD L K +G+I AI +F++M V D TYS+++
Sbjct: 311 FKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDG 370
Query: 352 LCKAKRLPSASKLL 365
L KA +L A +LL
Sbjct: 371 LGKAGKLDDARRLL 384
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 207/386 (53%), Gaps = 11/386 (2%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
MR+ G P+ +TYN+L++G +S + L + M++ G PDV +YN+L+H ++G+
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
DEA ++F + P T+N ++NG CK D A R+ + + VP++VTYN
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRK 200
L+ GLCK GR+ AR ++ D G +PN ITY+T++ C R L++ ++ ++
Sbjct: 121 LVNGLCKNGRVDEARMLIV---DKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
GY + Y +I +K R+ EA + +V G++ D ++Y I+ CK G++E A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
L+L +M+++G D +H +I+GLCK + A + L M G N ++N ++
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297
Query: 321 LGKDGKIDHAINVFESM---EVKDS-FTYSSMVHNLCKAK---RLPSASKLLLSCLKSGV 373
+ GK A+ F+ M VK + TY+ +V LCKA+ R+ A L + ++ G
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 357
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKI 399
A++DGL +G +A+++
Sbjct: 358 VPDVVTYSALIDGLGKAGKLDDARRL 383
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 194/356 (54%), Gaps = 11/356 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C+ D IL RM + PDVVTYNSL+ G +N + + L+ ++ G
Sbjct: 86 LINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLI---VDKG 142
Query: 62 IPPDVWSYNSLMHCL-FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+V +Y++L+ L +L EA ++F ++ P T+NI+++GL K + A
Sbjct: 143 FSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEA 202
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F GL KHG P+ +TY + I GLCKAGR+ A +LK++ + G P+ +++ ++
Sbjct: 203 FELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVING 262
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ +LS M+ KG + + + T+I + G+ K+A ++M+ GV+
Sbjct: 263 LCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPT 322
Query: 241 IVSYNTLINLYCK---EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+V+YN L++ CK EG+++ A L D M ++G D T++ LIDGL KAG + AR
Sbjct: 323 VVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARR 382
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
L M G N+ YN ++ L K+D A+ +F +M V D+ TY +++
Sbjct: 383 LLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 129/252 (51%), Gaps = 3/252 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID + + + + + + + G+ PD +TY I G + + +L +L +M E
Sbjct: 188 ILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK 247
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV S+N++++ L + + DEA + M +P +FN ++ G C+ A
Sbjct: 248 GCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKA 307
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKA---GRLRTARWILKELGDSGHAPNAITYTTI 177
+ F+ + K G P +VTYNIL+ GLCKA GR++ A + + + G P+ +TY+ +
Sbjct: 308 MTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSAL 367
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + K +L AM+ KG + + Y ++I+ + ++ EA + MV G
Sbjct: 368 IDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGC 427
Query: 238 QLDIVSYNTLIN 249
D ++Y T+I+
Sbjct: 428 VPDTITYGTIIS 439
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 113/218 (51%), Gaps = 3/218 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ ID C+ + +L M E G PDVV++N++I G + + + LL M
Sbjct: 223 VFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAK 282
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY---T 117
G P+ S+N+L+ + GK +A F++M+ + P T+NI+++GLCK R
Sbjct: 283 GCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRI 342
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
A+ +F + + G VP++VTY+ LI GL KAG+L AR +L + G PN TY ++
Sbjct: 343 KEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSL 402
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 215
+ K LE+ AM KG D Y T+I+A
Sbjct: 403 ISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 189/354 (53%), Gaps = 4/354 (1%)
Query: 23 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 82
E G PD VT+N+L+ G R + L+++D MLE G DV++YNSL+ L +LG+
Sbjct: 294 EEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEI 353
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
DEA + M+ D P T T+N ++ LCK + + A + R L G +P++ T+N L
Sbjct: 354 DEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSL 413
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
I+GLC A + +E+ + G P+ TY+ +++ R+ K L +L M+ G
Sbjct: 414 IQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGC 473
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
+ Y T+I K R+ +A D +QM GV V+YNTLIN CK ++E A
Sbjct: 474 ARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQ 533
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
L+D+M +G + DK+T+T ++ C+ G+IK A ++ M G + ++ Y ++ L
Sbjct: 534 LMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLC 593
Query: 323 KDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
K G++D A + S+++K Y+ ++ LCK KR A +L ++ G
Sbjct: 594 KAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKG 647
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 196/392 (50%), Gaps = 43/392 (10%)
Query: 23 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 82
R+ + PD YN ++ + + L L +M+ +PPDV ++N L+ L + +
Sbjct: 156 RDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQL 215
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
A + +DM L P TF ++ G + + ALR+ + + G V+ N+L
Sbjct: 216 RPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVL 275
Query: 143 IKGLCKAGRLRTA-RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
+ GLCK GR+ A R+I +E G P+ +T+ ++ R K GLE++ M KG
Sbjct: 276 VNGLCKEGRIEEALRFIYEE---EGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKG 332
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA-- 259
+ D + Y ++I+ K+G + EA + + MV+ + + V+YNTLI CKE +EA
Sbjct: 333 FELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAAT 392
Query: 260 ---------------------------------AYLLLDEMEKQGFECDKYTHTILIDGL 286
A L +EM+++G + D++T++ILI+ L
Sbjct: 393 ELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESL 452
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDS 342
C +K A + L+ M G N+ YN ++D L K+ ++ A ++F+ ME+ + S
Sbjct: 453 CSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSS 512
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
TY+++++ LCK+KR+ A++L+ + G++
Sbjct: 513 VTYNTLINGLCKSKRVEEAAQLMDQMIMEGLK 544
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 178/356 (50%), Gaps = 4/356 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ G +++ M E G DV TYNSLI+G + + ++++L M+
Sbjct: 308 LVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRD 367
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +YN+L+ L + + A + + + + P TFN ++ GLC + A+
Sbjct: 368 CEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAM 427
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++ G P+ TY+ILI+ LC RL+ A +LKE+ SG A N + Y T++
Sbjct: 428 ELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGL 487
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N + +I M+ G + Y T+I K R++EA M+QM+ +G++ D
Sbjct: 488 CKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDK 547
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y T++ +C++G ++ A ++ M G E D T+ LI GLCKAG + A L
Sbjct: 548 FTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRS 607
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLC 353
+ G +AYN ++ L K + A+ +F M + D TY + LC
Sbjct: 608 VQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLC 663
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 197/441 (44%), Gaps = 53/441 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI A C+ +L M G+ PD T+ +L+ G + + +L + + M+E
Sbjct: 204 ILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVES 263
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVF--QDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G S N L++ L + G+ +EA R ++ C D TFN ++NGLC+ +
Sbjct: 264 GCELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGFCPD----QVTFNALVNGLCRTGHIK 319
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
L M + + GF ++ TYN LI GLCK G + A IL + PN +TY T++
Sbjct: 320 QGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLI 379
Query: 179 K-------------------------------------CCFRNRKYKLGLEILSAMKRKG 201
C NR ++ +E+ MK KG
Sbjct: 380 GTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNR--EIAMELFEEMKEKG 437
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
D F Y +I + RLKEA +++M G ++V YNTLI+ CK ++ A
Sbjct: 438 CDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAE 497
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+ D+ME G T+ LI+GLCK+ ++ A ++ M G + Y ++
Sbjct: 498 DIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYF 557
Query: 322 GKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
+ G I A ++ ++M + D TY +++ LCKA R+ ASKLL S G+ +
Sbjct: 558 CQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTP 617
Query: 378 SAQKAVVDGLRHSGCRREAKK 398
A V+ L C+R+ K
Sbjct: 618 QAYNPVIQAL----CKRKRTK 634
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 170/358 (47%), Gaps = 7/358 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ D IL+ M P+ VTYN+LI + + + + +L + G
Sbjct: 343 LISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKG 402
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV ++NSL+ L + A +F++M P T++I++ LC R AL
Sbjct: 403 VLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEAL 462
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + ++ G +V YN LI GLCK R+ A I ++ G + +++TY T++
Sbjct: 463 MLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGL 522
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++++ + +++ M +G D F Y T++ F + G +K A D ++ M +G + DI
Sbjct: 523 CKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDI 582
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLE 300
V+Y TLI CK G+++ A LL ++ +G + +I LCK K A RL E
Sbjct: 583 VTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFRE 642
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDG-----KIDHAINVFESMEVKDSFTYSSMVHNLC 353
M K G ++ Y + L G +D + + E + + ++ + LC
Sbjct: 643 MMEK-GDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLC 699
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 180/440 (40%), Gaps = 78/440 (17%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE--MGIPPDVWS 68
SFD+ T+L +M + I D T+ + + L ++ L ++E + PD
Sbjct: 107 SFDSMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRF 166
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
YN + L + K + M+ D P
Sbjct: 167 YNVALSLLVKANKLKLVETLHSKMV-ADAVP----------------------------- 196
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
P++ T+NILI+ LCKA +LR A +L+++ + G P+ T+TT+M+ +
Sbjct: 197 -----PDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVE 251
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
L I M G ++ K GR++EA ++ + +G D V++N L+
Sbjct: 252 GALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALV 309
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
N C+ G ++ ++D M ++GFE D YT+ LI GLCK G I A L +M +
Sbjct: 310 NGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCE 369
Query: 309 SNLEAYNCIVDRLGKDGKIDHA-----------------------------------INV 333
N YN ++ L K+ ++ A + +
Sbjct: 370 PNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMEL 429
Query: 334 FESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
FE M+ K D FTYS ++ +LC +RL A LL SG ++DGL
Sbjct: 430 FEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCK 489
Query: 390 SGCRREAKKIQSKIRMAKIS 409
+ +A+ I ++ M +S
Sbjct: 490 NNRVGDAEDIFDQMEMLGVS 509
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 137/301 (45%), Gaps = 5/301 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI++ C +L M +G + +VV YN+LI G +N+ + + D+ D+M +
Sbjct: 447 ILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEML 506
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ +YN+L++ L + + +EA ++ MI L P T+ ML C+ A
Sbjct: 507 GVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRA 566
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + +G P++VTY LI GLCKAGR+ A +L+ + G Y +++
Sbjct: 567 ADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQA 626
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK-IGRLKEATDYMEQMVTDGVQL 239
+ ++ K + + M KG D Y V G ++EA D+ +M+ G+
Sbjct: 627 LCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILP 686
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDE-MEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+ S+ L C + L++ MEK F + T +I G K A +
Sbjct: 687 EFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRF---SQSETSIIRGFLKIQKFNDALAN 743
Query: 299 L 299
L
Sbjct: 744 L 744
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 136/298 (45%), Gaps = 5/298 (1%)
Query: 107 MLNGLCKNRYTDNALRMFR-GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
+L+ L + + +AL +F+ + + ++ L++ L +AG + +L+++ S
Sbjct: 62 LLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSMLTLLRQMHSS 121
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF--DGFGYCTVIAAFVKIGRLK 223
+ T+ ++ + + L + + + D Y ++ VK +LK
Sbjct: 122 KIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLK 181
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
+MV D V D+ ++N LI CK +L A L+L++M G D+ T T L+
Sbjct: 182 LVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLM 241
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME--VKD 341
G + +++GA E M + G + + N +V+ L K+G+I+ A+ E D
Sbjct: 242 QGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGFCPD 301
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
T++++V+ LC+ + +++ L+ G + +++ GL G EA +I
Sbjct: 302 QVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEI 359
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 208/391 (53%), Gaps = 7/391 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI YC+ D +L RM ++PDVVTYN+++ + L ++++LD L+
Sbjct: 181 VLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQR 237
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV +Y L+ +A ++ +M P T+N+++NG+CK D A
Sbjct: 238 ECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEA 297
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + +G P ++T+NI+++ +C GR A +L ++ G +P+ +T+ ++
Sbjct: 298 IKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINF 357
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R R +++L M + G + Y ++ F + ++ A +Y+E MV+ G D
Sbjct: 358 LCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPD 417
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+YNTL+ CK+GK++AA +L+++ +G T+ +IDGL K G + A LE
Sbjct: 418 IVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLE 477
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDS-FTYSSMVHNLCKAK 356
M + G ++ Y+ ++ LG++GK+D AI +F ME +K S TY++++ LCKA+
Sbjct: 478 EMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQ 537
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ A L ++ G + ++ +++G+
Sbjct: 538 QTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 179/367 (48%), Gaps = 7/367 (1%)
Query: 42 TRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 101
RN L L L+ M+ G PDV + SL+ + GK +A R+ + + P
Sbjct: 117 VRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDV 176
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
T+N+++ G CK+ D AL + L++ P++VTYN +++ LC +G+L+ A +L
Sbjct: 177 ITYNVLIGGYCKSGEIDKALEV---LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDR 233
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
P+ ITYT +++ + +++L M++KG D Y +I K GR
Sbjct: 234 QLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGR 293
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
L EA ++ M + G + +++++N ++ C G+ A LL +M ++G T I
Sbjct: 294 LDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNI 353
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 340
LI+ LC+ + A LE M K G N +YN ++ ++ K+D AI E M +
Sbjct: 354 LINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRG 413
Query: 341 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
D TY++++ LCK ++ +A ++L G + V+DGL G A
Sbjct: 414 CYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAV 473
Query: 398 KIQSKIR 404
++ ++R
Sbjct: 474 ELLEEMR 480
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 152/303 (50%), Gaps = 7/303 (2%)
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
++ N + L + G+ +E + + MI P ++ G C++ T A R+
Sbjct: 107 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEI 166
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
L+ G VP+++TYN+LI G CK+G + A +L+ + AP+ +TY TI++ + K
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGK 223
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
K +E+L ++ D Y +I A + +A +++M G + D+V+YN
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 283
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
LIN CKEG+L+ A L+ M G + + TH I++ +C G A L M + G
Sbjct: 284 LINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG 343
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSAS 362
++ +N +++ L + + AI+V E M V +S +Y+ ++H C+ K++ A
Sbjct: 344 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAI 403
Query: 363 KLL 365
+ L
Sbjct: 404 EYL 406
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 7/200 (3%)
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
+F+ F + V+ G L+E ++E+M+ G D+++ +LI +C+ GK + A
Sbjct: 103 SFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATR 162
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
+++ +E G D T+ +LI G CK+G I A LE + ++ ++ YN I+ L
Sbjct: 163 IMEILENSGAVPDVITYNVLIGGYCKSGEIDKA---LEVLERMSVAPDVVTYNTILRSLC 219
Query: 323 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
GK+ A+ V + + D TY+ ++ C + A KLL K G +
Sbjct: 220 DSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVV 279
Query: 379 AQKAVVDGLRHSGCRREAKK 398
+++G+ G EA K
Sbjct: 280 TYNVLINGICKEGRLDEAIK 299
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 204/399 (51%), Gaps = 9/399 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ +L M+ G SPDV+TY L+ G + S ++ + ++L EML+
Sbjct: 196 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 255
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P++ +YNSL+H L + + +A + +DM C TP T+ +++GLCK +A
Sbjct: 256 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 315
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
M + G P+L+ YN+LI GLCKA ++ + +L+ G P+ +TY++++
Sbjct: 316 CAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYG 375
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R+ + +L +K +G D Y T+I K G++ EA D E M DG D
Sbjct: 376 LCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDAD 435
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+Y+TLI+ CK G+++ A+LLL M + G T+ LI GLC ++ A +E
Sbjct: 436 VVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVE 495
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---------DSFTYSSMVHN 351
M + + YN ++ + + ++D A+ + E + + D+ YSS++
Sbjct: 496 EMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDG 555
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
LCKA R+ A + +GV +++GL+ S
Sbjct: 556 LCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKS 594
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 121/378 (32%), Positives = 197/378 (52%), Gaps = 9/378 (2%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
SP+V+TY+ LI G + + +S +++LL+ M G PDV +Y L+ L + K A
Sbjct: 188 SPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWE 247
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
V ++M+ P T+N +L+GLC+ R +AL + R + G P +VTY LI GLC
Sbjct: 248 VLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLC 307
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K GR++ A +L ++ D G P+ + Y ++ + + + +L G D
Sbjct: 308 KVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVV 367
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y +VI + RL EA + + + G D++ Y+TLI+ CK GK++ A+ L + M
Sbjct: 368 TYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVM 427
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
G + D T++ LIDGLCKAG + A L L M ++G + YN ++ L +
Sbjct: 428 AGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHL 487
Query: 328 DHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL----LSCLKSGVRILKS- 378
D AI + E ME + TY+ ++H +C+ +R+ SA LL C+ +G L +
Sbjct: 488 DEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTI 547
Query: 379 AQKAVVDGLRHSGCRREA 396
A +++DGL +G EA
Sbjct: 548 AYSSLIDGLCKAGRVAEA 565
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 197/406 (48%), Gaps = 11/406 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ +C+ D + MR + P+V + LI G + +L M G
Sbjct: 15 LLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQGSG 74
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I D Y +L+ L++ + D+A + +M P T+N +++GLCKN D A
Sbjct: 75 IVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQ 134
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD-SGH------APNAITY 174
+F ++ P +VTYN L+ GL + G+L A + +E+ D H +PN ITY
Sbjct: 135 ELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITY 194
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
+ ++ + + +E+L +MK +G + D Y ++ K ++ A + + +M+
Sbjct: 195 SVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLD 254
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G ++V+YN+L++ C+ ++ A L+ +M +G + T+ LIDGLCK G +K
Sbjct: 255 AGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKD 314
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE---SMEVK-DSFTYSSMVH 350
A L M G +L YN +++ L K ++D +I + S +K D TYSS+++
Sbjct: 315 ACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIY 374
Query: 351 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
LC++ RL A +LLL G ++DGL +G EA
Sbjct: 375 GLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEA 420
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 160/320 (50%), Gaps = 11/320 (3%)
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
PDV++Y +L+ + G+ D+A R F +M +L P +I+++GLCK + + +ALR
Sbjct: 7 PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
FR +Q G V + V Y L+ GL K RL A IL E+ D G PN +TY +++ +
Sbjct: 67 FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV-------TDG 236
N + E+ MK + Y T++ + G+L+ A ++M+ D
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
++++Y+ LI+ CK ++ A LL+ M+ +G D T+TIL+DGLCK + A
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
L M G NL YN ++ L + ++ A+ + M + + TY +++ L
Sbjct: 247 EVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 306
Query: 353 CKAKRLPSASKLLLSCLKSG 372
CK R+ A +L + G
Sbjct: 307 CKVGRVKDACAMLADMIDKG 326
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 180/383 (46%), Gaps = 11/383 (2%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
PDV TY +L+ G R + + DEM + P+V+ + L+ L + + +A R
Sbjct: 6 QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
F+ M + T + +L+GL K + D AL + ++ HG P +VTYN LI GLC
Sbjct: 66 CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM-KRKGYTFDG 206
K A+ + + + +P+ +TY T++ FR K + + + M R+ + D
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185
Query: 207 ------FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
Y +I K R+ +A + +E M G D+++Y L++ CKE K+ AA
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
+ +L EM G + T+ L+ GLC+A + A + M G N+ Y ++D
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 305
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
L K G++ A + M K D Y+ +++ LCKA ++ + LL + G++
Sbjct: 306 LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPD 365
Query: 377 KSAQKAVVDGLRHSGCRREAKKI 399
+V+ GL S EA ++
Sbjct: 366 VVTYSSVIYGLCRSNRLDEACRL 388
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 156/312 (50%), Gaps = 6/312 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ +L M + G +PD++ YN LI G + + S+ LL + G
Sbjct: 302 LIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGG 361
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV +Y+S+++ L + + DEA R+ + P ++ +++GLCK D A
Sbjct: 362 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAF 421
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + G ++VTY+ LI GLCKAGR+ A +L + G P+ +TY +++K
Sbjct: 422 DLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL 481
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ-----MVTDG 236
+E++ M+R Y +I ++ R+ A +EQ + G
Sbjct: 482 CDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGG 541
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
LD ++Y++LI+ CK G++ A EM G D T++IL++GL K+ ++ R
Sbjct: 542 TALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELR 601
Query: 297 -LHLEYMNKIGF 307
L L+ M ++G+
Sbjct: 602 HLVLDQMVQLGY 613
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/379 (31%), Positives = 193/379 (50%), Gaps = 6/379 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ Y +L M G+ +V+ +N +I G L +L+L EM E
Sbjct: 882 ILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEES 941
Query: 61 G-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G PPDV++Y++++ L + GK D+A R+ +DM+ +P T++ +L+GLCK D
Sbjct: 942 GSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDE 1001
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + + + + G P +VTYN +I G CK GR+ A +L+E+ D G PN +TYT ++
Sbjct: 1002 ATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLD 1061
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ K + + ++ M KGY + F Y +++ F K ++ A + M+ G
Sbjct: 1062 AFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVP 1121
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
++VSYNT+I CK K+ LLL++M D T +ID +CK + A
Sbjct: 1122 NVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELF 1181
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-----DSFTYSSMVHNLCK 354
+ + G NL YN +V L K + D A + M K D TY++++ LCK
Sbjct: 1182 NLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCK 1241
Query: 355 AKRLPSASKLLLSCLKSGV 373
+KR+ A KL L L G+
Sbjct: 1242 SKRVDRAYKLFLQMLSDGL 1260
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/343 (33%), Positives = 187/343 (54%), Gaps = 8/343 (2%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
PD VTYN++I G +++ L ++ LL+EM++ G P+V+SYN+++H + + + A +
Sbjct: 228 PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWL 287
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
+ M+ P ++ ++NGLCK D A R+ + + G P ++TY L+ G C+
Sbjct: 288 LEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCR 347
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
G L A +++++ + G+ PNAITY IM R + ++L M + G D
Sbjct: 348 VGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAIN 407
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y T+I+ F K G+L+EA D +EQM+ G + D+ +TLI+ CK +++A LL
Sbjct: 408 YSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELL--RM 465
Query: 269 KQGFEC--DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
G +C D ++ILI LCKA + A L+ M K ++ YN +VD L K +
Sbjct: 466 SIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRR 525
Query: 327 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
I+ A +F+ M + D TYS ++H+ CK L SA K+L
Sbjct: 526 INDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKML 568
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 197/383 (51%), Gaps = 5/383 (1%)
Query: 30 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 89
D VTY++LI+G R + + +L DEM G+ + S++ L G+ +A F
Sbjct: 160 DTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHF 219
Query: 90 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
++M P + T+N M+NGL K+ D+A+R+ + +GF P + +YN ++ G CKA
Sbjct: 220 REM-SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKA 278
Query: 150 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 209
R+ A W+L+++ G P+ ++YTT++ + + ++ M ++G + Y
Sbjct: 279 NRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITY 338
Query: 210 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
T++ F ++G L A + + +M G + + ++YN +++++C+ +E A+ +L M +
Sbjct: 339 GTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQ 398
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 329
G D ++ +I G CKAG ++ A LE M + G ++ + ++D L K ID
Sbjct: 399 TGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDS 458
Query: 330 AINVFE---SME-VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 385
A + M+ D YS ++H LCKAKRLP A L +K+ +VVD
Sbjct: 459 AQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVD 518
Query: 386 GLRHSGCRREAKKIQSKIRMAKI 408
GL S +A + ++R A +
Sbjct: 519 GLCKSRRINDAFLLFDRMRAAGV 541
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 203/432 (46%), Gaps = 39/432 (9%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
D +L M + G +P+V +YN+++ G + + + +L LL++M+ G PPDV SY +
Sbjct: 246 LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTT 305
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
+++ L +L + DEA RV MI P T+ +++G C+ D A+ + R + + G
Sbjct: 306 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 365
Query: 132 FVPELVTYN-----------------------------------ILIKGLCKAGRLRTAR 156
+ P +TYN +I G CKAG+LR A
Sbjct: 366 YRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAH 425
Query: 157 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 216
+L+++ G P+ +T++ + E+L D Y +I A
Sbjct: 426 DLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHAL 485
Query: 217 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
K RL EA +++ MV + D+V+YN++++ CK ++ A+LL D M G D
Sbjct: 486 CKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDV 545
Query: 277 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
T++I+I CK N+ A LE M + ++ Y+ +++ L K G +D A +VF+
Sbjct: 546 VTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQE 605
Query: 337 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 392
M + TY++++ LCK ++ A+++L K +++GL ++
Sbjct: 606 MLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASR 665
Query: 393 RREAKKIQSKIR 404
EA ++ +++
Sbjct: 666 LEEAWRVLREMK 677
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 187/368 (50%), Gaps = 4/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ D ++++M + G P+V+TY +L+ G R L +++L+ +M E G
Sbjct: 306 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 365
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +YN++MH + + A++V Q MI P ++ +++G CK A
Sbjct: 366 YRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAH 425
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P++ + LI LCKA + +A+ +L+ AP+ + Y+ ++
Sbjct: 426 DLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHAL 485
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ L M + D Y +V+ K R+ +A ++M GV D+
Sbjct: 486 CKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDV 545
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y+ +I+ +CK+ L++A+ +L+ M++ D T++ LI+GLCKAG + A +
Sbjct: 546 VTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQE 605
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G NL YN ++D L K K++ A + E M DS TY+ +++ LC A R
Sbjct: 606 MLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASR 665
Query: 358 LPSASKLL 365
L A ++L
Sbjct: 666 LEEAWRVL 673
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 174/312 (55%), Gaps = 7/312 (2%)
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
+ G D ++ N L+ L +L +P +A +V+++ +C +P TF I+++GLC+
Sbjct: 837 QEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLC--CSPNMFTFTILIHGLCRAGDIG 894
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH-APNAITYTTI 177
A + + + +HG ++ +N++IKGLC A +L +A + KE+ +SG P+ TY+TI
Sbjct: 895 TAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTI 954
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ ++ K ++ M KG + + Y +++ K G+L EAT +++M G
Sbjct: 955 VDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGC 1014
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+IV+YNT+I+ +CK G+++ AY LL+EM G + + T+T+L+D CK G + A
Sbjct: 1015 SPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIG 1074
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 353
+E M + G+ NL YN ++D K +++ A + SM V + +Y++++ LC
Sbjct: 1075 LVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLC 1134
Query: 354 KAKRLPSASKLL 365
KA ++ LL
Sbjct: 1135 KATKVHEGVLLL 1146
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 180/366 (49%), Gaps = 18/366 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C+ G +L +M PD+VT+N++I + + + +L + + E G
Sbjct: 1129 VIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESG 1188
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD-LTPCTATFNIMLNGLCKNRYTDNA 120
P++ +YNSL+H L + + D+A + ++M +P T+N +++GLCK++ D A
Sbjct: 1189 CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRA 1248
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F + G P+ VTY+I+I LCK + A +L+ + +G P AITY T++
Sbjct: 1249 YKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDG 1308
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ LEIL + KG D + I K GRL++A + +E M+ G+ D
Sbjct: 1309 FCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPD 1368
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK------- 293
V+YNTL+ +C E A L + M + G E D T+T L+ L + K
Sbjct: 1369 TVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVS 1428
Query: 294 ------GARLHLEYMNKIGFDSNLEA---YNC-IVDRLGKDGKIDHAINVFESMEVKDSF 343
G +L+ E +K+ +EA C IVD GK G A VFE M+ ++
Sbjct: 1429 KSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVV 1488
Query: 344 TYSSMV 349
+S+M+
Sbjct: 1489 LWSAML 1494
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 169/346 (48%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ +C+ + + +L M + G PD + Y+++I+G + L + DLL++M+ G
Sbjct: 376 IMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRG 435
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV ++L+ L + D A + + I D P ++I+++ LCK + A
Sbjct: 436 CRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAE 495
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ K+ P++VTYN ++ GLCK+ R+ A + + +G P+ +TY+ ++
Sbjct: 496 SWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSF 555
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ ++L MK D Y +I K G + +A D ++M+ G ++
Sbjct: 556 CKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNL 615
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTLI+ CK K+E A +L+ M KQ D T+T LI+GLC A ++ A L
Sbjct: 616 VTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLRE 675
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS 347
M G + Y ++ L K ++ + + ME + +++
Sbjct: 676 MKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATEEGQWNA 721
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 173/351 (49%), Gaps = 10/351 (2%)
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G +++ N L++ L + + +A+ +F+ I G T T++ +++G + A
Sbjct: 121 GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPA 180
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + + G + +++GLC AG+ A +E+ + P+++TY T++
Sbjct: 181 YELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTC-PPDSVTYNTMING 239
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ + + +L M G+ + F Y TV+ F K R++ A +EQMVT G D
Sbjct: 240 LSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPD 299
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+VSY T+IN CK +++ A ++D+M ++G + + T+ L+DG C+ G++ GA +
Sbjct: 300 VVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVR 359
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + G+ N YN I+ + ++ A V + M D+ YS+++ CKA
Sbjct: 360 KMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAG 419
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA-KKIQSKIRMA 406
+L A LL ++ G R + ++D L C+ A Q +RM+
Sbjct: 420 KLREAHDLLEQMIRRGCRPDVACLSTLIDAL----CKAAAIDSAQELLRMS 466
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 115/232 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI A C+ + L+ M + PDVVTYNS++ G ++ ++ + L D M
Sbjct: 480 ILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAA 539
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV +Y+ ++H + D A ++ + M P T++ ++NGLCK D A
Sbjct: 540 GVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKA 599
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ + G P LVTYN LI GLCK ++ A +L+ + P++ITYT ++
Sbjct: 600 FDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLING 659
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
+ + +L MK KG D Y T++ A K L+ +++M
Sbjct: 660 LCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEM 711
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 158/344 (45%), Gaps = 25/344 (7%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I + C++ D +L M + G P +TY +LI G + L +L++L +L
Sbjct: 1269 IVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSK 1328
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +++ + L + G+ +A + + M+ L P T T+N +L G C T++A
Sbjct: 1329 GSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDA 1388
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +F +++ G P+ TY L+ L ++ + +L E+ S
Sbjct: 1389 VDLFEVMRQCGCEPDNATYTTLVGHLVDK---KSYKDLLAEVSKS--------------- 1430
Query: 181 CFRNRKYKLGLEILSAMKRK-GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ +KL E+ S ++ D C ++ F K G ++A E M Q
Sbjct: 1431 -MVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGM----DQR 1485
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
++V ++ ++ +Y + E A+ L M +G E D T L+ C AG + A
Sbjct: 1486 NVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEF 1545
Query: 300 EYMNK-IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS 342
+++ G + ++ ++C++D LG+ G ++ A ++ M K S
Sbjct: 1546 VSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLMLGMPCKPS 1589
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 159/374 (42%), Gaps = 48/374 (12%)
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN--ALRMFRGLQ 128
S++ + Q ++A RV D G L+P + G R D AL F +
Sbjct: 65 SVLERIVQGASDEQALRVALDEYRGQLSP-------EIVGKVLQRLIDPGAALVFFEWAE 117
Query: 129 -KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
+ G+ E+ N L+ L KA + A + + + + +TY+T++ R K
Sbjct: 118 TRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKI 177
Query: 188 KLGLEILSAMKRKGYTF----------------------------------DGFGYCTVI 213
E+ M RKG D Y T+I
Sbjct: 178 LPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMI 237
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
K RL +A +E+MV +G ++ SYNT+++ +CK ++E A LL++M +G
Sbjct: 238 NGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCP 297
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
D ++T +I+GLCK + A ++ M + G N+ Y +VD + G +D A+ +
Sbjct: 298 PDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVEL 357
Query: 334 FESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
M + ++ TY++++H C+ + A ++L +++G ++ G
Sbjct: 358 VRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCK 417
Query: 390 SGCRREAKKIQSKI 403
+G REA + ++
Sbjct: 418 AGKLREAHDLLEQM 431
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 216/402 (53%), Gaps = 11/402 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I YC+ + ++L+RM +SPDVVTYN+++ + L ++++LD ML+
Sbjct: 177 VMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV +Y L+ + +A ++ +M TP T+N+++NG+CK D A
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G P ++T+NI+++ +C GR A +L ++ G +P+ +T+ ++
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN- 352
Query: 181 CFRNRKYKLG--LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
F RK LG ++IL M + G + Y ++ F K ++ A +Y+E+MV+ G
Sbjct: 353 -FLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
DIV+YNT++ CK+GK+E A +L+++ +G T+ +IDGL KAG A
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV---FESMEVK-DSFTYSSMVHNLCK 354
L+ M + Y+ +V L ++GK+D AI FE M V+ ++ T++S++ LCK
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCK 531
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
++ A L+ + G + +++ +++GL + G +EA
Sbjct: 532 TRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEA 573
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 186/377 (49%), Gaps = 7/377 (1%)
Query: 32 VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 91
V N+ + R L L+ M+ G PD+ +L+ ++GK +A ++ +
Sbjct: 103 VESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEV 162
Query: 92 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
+ P T+N+M++G CK +NAL + L + P++VTYN +++ LC +G+
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGK 219
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
L+ A +L + P+ ITYT +++ R+ +++L M+ +G T D Y
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNV 279
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
++ K GRL EA ++ M + G Q +++++N ++ C G+ A LL +M ++G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
F T ILI+ LC+ G + A LE M K G N +YN ++ K+ K+D AI
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 332 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
E M + D TY++M+ LCK ++ A ++L G + V+DGL
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 388 RHSGCRREAKKIQSKIR 404
+G +A K+ ++R
Sbjct: 460 AKAGKTGKAIKLLDEMR 476
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 159/309 (51%), Gaps = 16/309 (5%)
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMI----CGDLTPCTATFNIMLNGLCKNRYTDNA 120
DV S N L L + G+ +E + ++M+ D+ PCT ++ G C+ T A
Sbjct: 102 DVESNNHLRQ-LVRTGELEEGFKFLENMVYHGNVPDIIPCTT----LIRGFCRMGKTRKA 156
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ L+ G VP+++TYN++I G CKAG + A +L + S P+ +TY TI++
Sbjct: 157 AKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRS 213
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K K +E+L M ++ D Y +I A + + +A +++M G D
Sbjct: 214 LCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPD 273
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YN L+N CKEG+L+ A L++M G + + TH I++ +C G A L
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + GF ++ +N +++ L + G + AI++ E M +S +Y+ ++H CK K
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEK 393
Query: 357 RLPSASKLL 365
++ A + L
Sbjct: 394 KMDRAIEYL 402
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 129/272 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ + C + +L M G SP VVT+N LI R LL ++D+L++M +
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKH 373
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ SYN L+H + K D A + M+ P T+N ML LCK+ ++A
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + L G P L+TYN +I GL KAG+ A +L E+ P+ ITY++++
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 493
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R K ++ +R G + + +++ K + A D++ M+ G +
Sbjct: 494 LSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPT 553
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
SY LI EG + A LL+E+ +G
Sbjct: 554 ETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
L+ V N + + G+LE + L+ M G D T LI G C+ G + A
Sbjct: 100 LEDVESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKI 159
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-DSFTYSSMVHNLCKAKR 357
LE + G ++ YN ++ K G+I++A++V + M V D TY++++ +LC + +
Sbjct: 160 LEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGK 219
Query: 358 LPSASKLL 365
L A ++L
Sbjct: 220 LKQAMEVL 227
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 190/362 (52%), Gaps = 4/362 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
T+ + M E GI PDVVT+N+L+ R + ++ +L+EM G+ PD ++ +LM
Sbjct: 171 TVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGF 230
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ G A RV M+ +P T N+++NG CK ++AL + +GF P+
Sbjct: 231 VEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQ 290
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+TYN + GLC+ G + A ++ + GH P+ TY ++ C +N + + IL+
Sbjct: 291 ITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQ 350
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M +G D + T+I A RL+EA D Q+ G+ D+ ++N LIN CK G
Sbjct: 351 MVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGD 410
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+ A L +EM+ G D+ T+ LID LC G + A L+ M G + YN
Sbjct: 411 PQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNT 470
Query: 317 IVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
I+D L K +I+ A VF+ M++ +++ T+++++ LCK KR+ A++L+ + G
Sbjct: 471 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEG 530
Query: 373 VR 374
++
Sbjct: 531 LQ 532
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 210/431 (48%), Gaps = 40/431 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ + + + G PD +TYN+ + G +N + +L ++D M++
Sbjct: 260 VLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQE 319
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI------------------CGD------ 96
G PDV++YN +++CL + G+ +EA + M+ C
Sbjct: 320 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEA 379
Query: 97 -----------LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
L+P TFNI++N LCK ALR+F ++ G P+ VTYN LI
Sbjct: 380 LDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDN 439
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LC G+L A +LKE+ +G + +TY TI+ + + + E+ M +G + +
Sbjct: 440 LCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 499
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ T+I K R+ +A + QM+++G+Q + ++YN+++ YCK+G ++ A +L
Sbjct: 500 AITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQ 559
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M GFE D T+ LI+GLCKAG + A L M G + +AYN ++ L +
Sbjct: 560 TMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRN 619
Query: 326 KIDHAINVFESM----EVKDSFTYSSMVHNLCK-AKRLPSASKLLLSCLKSGVRILKSAQ 380
A+N+F M E D+FTY + LC+ + A LL + G S+
Sbjct: 620 NTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSF 679
Query: 381 KAVVDGLRHSG 391
+ + +GL + G
Sbjct: 680 RMLAEGLLNLG 690
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 126/434 (29%), Positives = 199/434 (45%), Gaps = 39/434 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A C+ +L M +G++PD T+ +L+ G + +L + MLEMG
Sbjct: 191 LMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMG 250
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + N L++ +LG+ ++A Q I P T+N +NGLC+N + +AL
Sbjct: 251 CSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHAL 310
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT-IMKC 180
++ + + G P++ TYNI++ LCK G+L A+ IL ++ + G P+ T+ T I+
Sbjct: 311 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVAL 370
Query: 181 CFRNR----------------------------------KYKLGLEILSAMKRKGYTFDG 206
C NR +L L + MK G T D
Sbjct: 371 CSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDE 430
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T+I +G+L +A D +++M + G V+YNT+I+ CK+ ++E A + D+
Sbjct: 431 VTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQ 490
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+ QG + T LIDGLCK I A + M G N YN I+ K G
Sbjct: 491 MDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGD 550
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
I A ++ ++M D TY ++++ LCKA R A KLL G+R A
Sbjct: 551 IKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNP 610
Query: 383 VVDGLRHSGCRREA 396
V+ L R+A
Sbjct: 611 VIQSLFRRNNTRDA 624
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 186/385 (48%), Gaps = 5/385 (1%)
Query: 8 QFVSFDAGYTILNRMREA-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
Q + DA +LN++ GI D V YN L+ S + + EM E GI PDV
Sbjct: 126 QQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDV 185
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
++N+LM L + + A + ++M + P TF ++ G + ALR+
Sbjct: 186 VTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKAR 245
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
+ + G P VT N+LI G CK GR+ A +++ +G P+ ITY T + +N
Sbjct: 246 MLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGH 305
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
L+++ M ++G+ D F Y V+ K G+L+EA + QMV G DI ++NT
Sbjct: 306 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNT 365
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
LI C +LE A L ++ +G D YT ILI+ LCK G+ + A E M G
Sbjct: 366 LIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSG 425
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSAS 362
+ YN ++D L GK+ A+++ + ME + + TY++++ LCK R+ A
Sbjct: 426 CTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAE 485
Query: 363 KLLLSCLKSGVRILKSAQKAVVDGL 387
++ G+ ++DGL
Sbjct: 486 EVFDQMDLQGISRNAITFNTLIDGL 510
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 172/365 (47%), Gaps = 45/365 (12%)
Query: 91 DMICGDLTPC------TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
D++ L P T +N +LN L + ++ + + G P++VT+N L+K
Sbjct: 134 DLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMK 193
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
LC+A ++RTA +L+E+ SG AP+ T+TT+M+ K L + + M G +
Sbjct: 194 ALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSP 253
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+I + K+GR+++A Y++Q + +G + D ++YNT +N C+ G + A ++
Sbjct: 254 TKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVM 313
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM---------------------- 302
D M ++G + D +T+ I+++ LCK G ++ A+ L M
Sbjct: 314 DVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSG 373
Query: 303 NKI-------------GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 345
N++ G ++ +N +++ L K G A+ +FE M+ D TY
Sbjct: 374 NRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTY 433
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
++++ NLC +L A LL +G ++DGL EA+++ ++ +
Sbjct: 434 NTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDL 493
Query: 406 AKISH 410
IS
Sbjct: 494 QGISR 498
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 206/391 (52%), Gaps = 7/391 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI YC+ D +L RM ++PDVVTYN+++ + L ++++LD ++
Sbjct: 182 VLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQR 238
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV +Y L+ +A ++ +M P T+N+++NG+CK D A
Sbjct: 239 ECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEA 298
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + +G P ++T+NI+++ +C GR A +L ++ G +P+ +T+ ++
Sbjct: 299 IKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINF 358
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R R +++L M + G + Y ++ F + ++ A +Y+E MV+ G D
Sbjct: 359 LCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPD 418
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+YNTL+ CK+GK +AA +L+++ +G T+ +IDGL K G + A LE
Sbjct: 419 IVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLE 478
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDS-FTYSSMVHNLCKAK 356
M + G ++ Y+ ++ LG +GK+D AI +F ME +K S TY++++ LCKA+
Sbjct: 479 EMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQ 538
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ A L ++ G + K+ +++G+
Sbjct: 539 QTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 178/366 (48%), Gaps = 7/366 (1%)
Query: 43 RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 102
RN L L L+ M+ G PDV + SL+ + GK +A R+ + + P
Sbjct: 119 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVI 178
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
T+N+++ G CK+ D AL++ L++ P++VTYN +++ LC +G+L+ A +L
Sbjct: 179 TYNVLIGGYCKSGEIDKALQV---LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQ 235
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
P+ ITYT +++ + +++L M++KG D Y +I K GRL
Sbjct: 236 MQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 295
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
EA ++ M G Q +++++N ++ C G+ A LL +M ++G T IL
Sbjct: 296 DEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNIL 355
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 340
I+ LC+ + A LE M K G N +YN ++ ++ K+D AI E M +
Sbjct: 356 INFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGC 415
Query: 341 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
D TY++++ LCK + +A ++L G + V+DGL G A +
Sbjct: 416 YPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAE 475
Query: 399 IQSKIR 404
+ ++R
Sbjct: 476 LLEEMR 481
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 155/304 (50%), Gaps = 9/304 (2%)
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
++ N + L + G+ +E + + MI P ++ G C++ T A R+
Sbjct: 108 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEI 167
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
L+ G VP+++TYN+LI G CK+G + A +L+ + AP+ +TY TI++ + K
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGK 224
Query: 187 YKLGLEILS-AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
K +E+L M+R+ Y D Y +I A + +A +++M G + D+V+YN
Sbjct: 225 LKEAMEVLDRQMQRECYP-DVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYN 283
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
LIN CKEG+L+ A L+ M G + + TH I++ +C G A L M +
Sbjct: 284 VLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRK 343
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 361
G ++ +N +++ L + + AI+V E M + +S +Y+ ++H C+ K++ A
Sbjct: 344 GCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRA 403
Query: 362 SKLL 365
+ L
Sbjct: 404 IEYL 407
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 7/200 (3%)
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
+F+ F + V+ G L+E ++E+M+ G D+++ +LI +C+ GK A
Sbjct: 104 SFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATR 163
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
+++ +E G D T+ +LI G CK+G I A L+ + ++ ++ YN I+ L
Sbjct: 164 IMEILENSGAVPDVITYNVLIGGYCKSGEIDKA---LQVLERMSVAPDVVTYNTILRSLC 220
Query: 323 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
GK+ A+ V + + D TY+ ++ C + A KLL K G +
Sbjct: 221 DSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVV 280
Query: 379 AQKAVVDGLRHSGCRREAKK 398
+++G+ G EA K
Sbjct: 281 TYNVLINGICKEGRLDEAIK 300
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 213/402 (52%), Gaps = 11/402 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I YC+ + ++L+RM +SPDVVTYN+++ + L ++++LD ML+
Sbjct: 177 VMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV +Y L+ + A ++ +M TP T+N+++NG+CK D A
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G P ++T+NI+++ +C GR A +L ++ G +P+ +T+ ++
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN- 352
Query: 181 CFRNRKYKLG--LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
F RK LG ++IL M + G + Y ++ F K ++ A +Y+E+MV+ G
Sbjct: 353 -FLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
DIV+YNT++ CK+GK+E A +L+++ +G T+ +IDGL KAG A
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 354
L+ M + Y+ +V L ++GK+D AI F E ++ T++S++ LCK
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+++ A L+ + G + +++ +++GL + G +EA
Sbjct: 532 SRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEA 573
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 186/377 (49%), Gaps = 7/377 (1%)
Query: 32 VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 91
V N+ + R L L+ M+ G PD+ +L+ +LGK +A ++ +
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 92 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
+ P T+N+M++G CK +NAL + L + P++VTYN +++ LC +G+
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGK 219
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
L+ A +L + P+ ITYT +++ R+ +++L M+ +G T D Y
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
++ K GRL EA ++ M + G Q +++++N ++ C G+ A LL +M ++G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
F T ILI+ LC+ G + A LE M + G N +YN ++ K+ K+D AI
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 332 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
E M + D TY++M+ LCK ++ A ++L G + V+DGL
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 388 RHSGCRREAKKIQSKIR 404
+G +A K+ ++R
Sbjct: 460 AKAGKTGKAIKLLDEMR 476
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 158/309 (51%), Gaps = 16/309 (5%)
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMI----CGDLTPCTATFNIMLNGLCKNRYTDNA 120
DV S N L + + G+ +E + ++M+ D+ PCT ++ G C+ T A
Sbjct: 102 DVESNNHLRQ-MVRTGELEEGFKFLENMVYHGNVPDIIPCTT----LIRGFCRLGKTRKA 156
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ L+ G VP+++TYN++I G CKAG + A +L + S P+ +TY TI++
Sbjct: 157 AKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRS 213
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K K +E+L M ++ D Y +I A + + A +++M G D
Sbjct: 214 LCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPD 273
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YN L+N CKEG+L+ A L++M G + + TH I++ +C G A L
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + GF ++ +N +++ L + G + AI++ E M +S +Y+ ++H CK K
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393
Query: 357 RLPSASKLL 365
++ A + L
Sbjct: 394 KMDRAIEYL 402
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 124/255 (48%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L M G SP VVT+N LI R LL ++D+L++M + G P+ SYN L+H
Sbjct: 331 LLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFC 390
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ K D A + M+ P T+N ML LCK+ ++A+ + L G P L+
Sbjct: 391 KEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLI 450
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN +I GL KAG+ A +L E+ P+ ITY++++ R K ++
Sbjct: 451 TYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF 510
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+R G + + +++ K + A D++ M+ G + + SY LI EG
Sbjct: 511 ERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMA 570
Query: 258 EAAYLLLDEMEKQGF 272
+ A LL+E+ +G
Sbjct: 571 KEALELLNELCNKGL 585
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 117/237 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ IL +M + G P+ ++YN L+ G + + +++ L+ M+
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN+++ L + GK ++A + + +P T+N +++GL K T A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ ++ P+ +TY+ L+ GL + G++ A E G PNA+T+ +IM
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLG 528
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
++R+ ++ L M +G + Y +I G KEA + + ++ G+
Sbjct: 529 LCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
V L+ V N + + G+LE + L+ M G D T LI G C+ G
Sbjct: 94 VNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKT 153
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-DSFTYSSMVHN 351
+ A LE + G ++ YN ++ K G+I++A++V + M V D TY++++ +
Sbjct: 154 RKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRS 213
Query: 352 LCKAKRLPSASKLL 365
LC + +L A ++L
Sbjct: 214 LCDSGKLKQAMEVL 227
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 186/362 (51%), Gaps = 4/362 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ N M + GI PDVVT N+LI R + ++ +L+EM + PD ++ +LM
Sbjct: 181 SVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGF 240
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ G + A RV M+ +P T N+++NG CK ++AL + GF P+
Sbjct: 241 IEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQ 300
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
VTYN + LC+ G + A ++ + GH P+ TY T++ C +N + I++
Sbjct: 301 VTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQ 360
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M +G D + T+I A RL+EA D ++ G+ D+ ++N LIN CK G
Sbjct: 361 MVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGD 420
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
L +EM+ G D+ T+ ILID LC G + A L+ M G + YN
Sbjct: 421 PHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNT 480
Query: 317 IVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
I+D L K +I+ A VF+ M+ + + T+++++ LCKAKR+ A++L+ +K G
Sbjct: 481 IIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEG 540
Query: 373 VR 374
++
Sbjct: 541 LQ 542
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 204/431 (47%), Gaps = 40/431 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ + + + G PD VTYN+ + +N +S +L ++D ML+
Sbjct: 270 VLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQE 329
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV++YN++++CL + G+ DEA + M+ P T TFN ++ LC + A
Sbjct: 330 GHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEA 389
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN---------- 170
L + R L G P++ T+NILI LCK G + +E+ SG AP+
Sbjct: 390 LDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDH 449
Query: 171 -------------------------AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
+TY TI+ + + + E+ M G +
Sbjct: 450 LCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRS 509
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ T+I K R+ +AT+ +EQMV +G+Q ++YN+++ YCK+G L+ A +L+
Sbjct: 510 AVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILE 569
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M GFE D T+ LI+GLCKAG + A L M G +AYN ++ L +
Sbjct: 570 TMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRN 629
Query: 326 KIDHAINVFESM----EVKDSFTYSSMVHNLCK-AKRLPSASKLLLSCLKSGVRILKSAQ 380
+ A+++F M E D+ TY + LC+ + A L+ + G S+
Sbjct: 630 NLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSF 689
Query: 381 KAVVDGLRHSG 391
+ + +GL + G
Sbjct: 690 RMLAEGLLNLG 700
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/399 (30%), Positives = 187/399 (46%), Gaps = 4/399 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ + + S +A + +M E G SP VT N LI G + + +L + + + G
Sbjct: 236 LMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADG 295
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +YN+ +HCL Q G A +V M+ P T+N ++N L KN D A
Sbjct: 296 FEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAK 355
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G +P+ T+N LI LC RL A + +EL G +P+ T+ ++
Sbjct: 356 GIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINAL 415
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ LG+ + MK G D Y +I +G+L A D +++M ++G
Sbjct: 416 CKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRST 475
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNT+I+ CK+ ++E A + D+M+ G T LIDGLCKA I A +E
Sbjct: 476 VTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQ 535
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M K G + YN I+ K G + A ++ E+M D TY ++++ LCKA R
Sbjct: 536 MVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGR 595
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
A KLL G+R A V+ L R+A
Sbjct: 596 TQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDA 634
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 193/393 (49%), Gaps = 9/393 (2%)
Query: 2 LIDAYCQFVSFDAGYTIL-NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++Y + FD ++ N++ G+ D YN L+ S + + +EM +
Sbjct: 130 FVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDR 189
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PDV + N+L+ L + + A + ++M + P TF ++ G + + A
Sbjct: 190 GIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAA 249
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR-WILKELGDSGHAPNAITYTTIMK 179
LR+ + + G P VT N+LI G CK GR+ A +I KE+ D G P+ +TY T +
Sbjct: 250 LRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIAD-GFEPDQVTYNTFVH 308
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
C +N L+++ M ++G+ D F Y TVI K G L EA + QMV G
Sbjct: 309 CLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLP 368
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK-GARLH 298
D ++NTLI C + +LE A L E+ +G D YT ILI+ LCK G+ G RL
Sbjct: 369 DTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRL- 427
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 354
E M G + YN ++D L GK+ +A+++ + ME + + TY++++ LCK
Sbjct: 428 FEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCK 487
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
R+ A ++ G+ ++DGL
Sbjct: 488 QMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGL 520
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 136/304 (44%), Gaps = 8/304 (2%)
Query: 107 MLNGLCKNRYTDNALRMFR-GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
+L L + + AL+M L + F P Y +I+ L AG +++E+
Sbjct: 59 LLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRRE 118
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEIL-SAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
GH A + ++ R R++ ++++ + + G D Y ++ + R+K
Sbjct: 119 GHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKL 178
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
+M G+Q D+V+ NTLI C+ ++ A L+L+EM D+ T T L+
Sbjct: 179 LESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQ 238
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF- 343
G + G+I+ A M + G N +++ K G+++ A+ + E+ D F
Sbjct: 239 GFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQK-EIADGFE 297
Query: 344 ----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
TY++ VH LC+ + A K++ L+ G V++ L +G EAK I
Sbjct: 298 PDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGI 357
Query: 400 QSKI 403
+++
Sbjct: 358 VNQM 361
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 125/393 (31%), Positives = 204/393 (51%), Gaps = 39/393 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLI C+ GY +L MR+ I P+ VTYN+LI G + + + LL+EML
Sbjct: 308 MLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSF 367
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ ++N+L+ G EA ++F M LTP ++ ++L+GLCKN D A
Sbjct: 368 GLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLA 427
Query: 121 ----LRMFR---------------GLQKHGFV----------------PELVTYNILIKG 145
+RM R GL K+GF+ P++VTY+ LI G
Sbjct: 428 RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 487
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
CK GR +TA+ I+ + G +PN I Y+T++ C R K + I AM +G+T D
Sbjct: 488 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 547
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
F + ++ + K G++ EA ++M M +DG+ + VS++ LIN Y G+ A+ + D
Sbjct: 548 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 607
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM K G +T+ L+ GLCK G+++ A L+ ++ + + YN ++ + K G
Sbjct: 608 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 667
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCK 354
+ A+++F M + DS+TY+S++ LC+
Sbjct: 668 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 700
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 179/366 (48%), Gaps = 4/366 (1%)
Query: 6 YCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD 65
YC+ F A +L+ M+ G+ DV TYN LI R++ ++ LL +M + I P+
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 337
Query: 66 VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 125
+YN+L++ GK A+++ +M+ L+P TFN +++G AL+MF
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 397
Query: 126 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 185
++ G P V+Y +L+ GLCK AR + +G ITYT ++ +N
Sbjct: 398 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 457
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
+ +L+ M + G D Y +I F K+GR K A + + ++ G+ + + Y+
Sbjct: 458 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 517
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
TLI C+ G L+ A + + M +G D +T +L+ LCKAG + A + M
Sbjct: 518 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 577
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSA 361
G N +++C+++ G G+ A +VF+ M FTY S++ LCK L A
Sbjct: 578 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 637
Query: 362 SKLLLS 367
K L S
Sbjct: 638 EKFLKS 643
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 191/399 (47%), Gaps = 6/399 (1%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
++ L M + I PDV T+N LI S L+ +M + G P + +YN+++H
Sbjct: 218 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 277
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
+ G+ A + M + T+N++++ LC++ + R ++K P
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 337
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
VTYN LI G G++ A +L E+ G +PN +T+ ++ +K L++
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 397
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M+ KG T Y ++ K A + +M +GV + ++Y +I+ CK G
Sbjct: 398 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 457
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
L+ A +LL+EM K G + D T++ LI+G CK G K A+ + + ++G N Y+
Sbjct: 458 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 517
Query: 316 CIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++ + G + AI ++E+M +D FT++ +V +LCKA ++ A + +
Sbjct: 518 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 577
Query: 372 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
G+ + +++G +SG +A + + M K+ H
Sbjct: 578 GILPNTVSFDCLINGYGNSGEGLKAFSVFDE--MTKVGH 614
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 179/377 (47%), Gaps = 5/377 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ D +LN M + GI PD+VTY++LI G + + +++ + +G
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 508
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ Y++L++ ++G EA R+++ MI T TFN+++ LCK A
Sbjct: 509 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 568
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R + G +P V+++ LI G +G A + E+ GH P TY +++K
Sbjct: 569 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 628
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + L ++ D Y T++ A K G L +A +MV + D
Sbjct: 629 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 688
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQG-FECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y +LI+ C++GK A L E E +G +K +T +DG+ KAG K E
Sbjct: 689 YTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFRE 748
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAK 356
M+ +G ++ N ++D + GKI+ ++ M ++ TY+ ++H K K
Sbjct: 749 QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 808
Query: 357 RLPSASKLLLSCLKSGV 373
+ ++ L S + +G+
Sbjct: 809 DVSTSFLLYRSIILNGI 825
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 180/376 (47%), Gaps = 6/376 (1%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
+P V Y+ LI R ++ SL++ M G P V++ N+++ + + G+
Sbjct: 162 NPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 219
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
++M+ + P ATFNI++N LC + + + + ++K G+ P +VTYN ++ C
Sbjct: 220 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 279
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K GR + A +L + G + TY ++ R+ + G +L M+++ +
Sbjct: 280 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 339
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y T+I F G++ A+ + +M++ G+ + V++N LI+ + EG + A + M
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
E +G + ++ +L+DGLCK AR M + G Y ++D L K+G +
Sbjct: 400 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 459
Query: 328 DHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
D A+ + M D TYS++++ CK R +A +++ + G+ +
Sbjct: 460 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 519
Query: 384 VDGLRHSGCRREAKKI 399
+ GC +EA +I
Sbjct: 520 IYNCCRMGCLKEAIRI 535
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/432 (20%), Positives = 180/432 (41%), Gaps = 52/432 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS---------------- 45
L+ A C+ + ++ M + I PD TY SLI+G R
Sbjct: 659 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 718
Query: 46 -------LLSCSLD-------------LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
+ +C +D ++M +G PD+ + N+++ ++GK ++
Sbjct: 719 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 778
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
N + +M + P T+NI+L+G K + + ++R + +G +P+ +T + L+ G
Sbjct: 779 NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 838
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
+C++ L ILK G + T+ ++ C N + +++ M G + D
Sbjct: 839 ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 898
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+++ + R +E+ + +M G+ + Y LIN C+ G ++ A+++ +
Sbjct: 899 KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 958
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM + ++ L K G A L L +M K+ + ++ ++ K+G
Sbjct: 959 EMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNG 1018
Query: 326 KIDHAINVFESMEVK----------DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
NV E++E++ D +Y+ ++ LC + A +L G
Sbjct: 1019 ------NVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLA 1072
Query: 376 LKSAQKAVVDGL 387
+ KA++ GL
Sbjct: 1073 NATTYKALIRGL 1084
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 143/313 (45%), Gaps = 1/313 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ Y + + + + GI PD +T +SL+ G +++L L +L +
Sbjct: 799 ILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICR 858
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ D +++N L+ G+ + A + + M ++ T + M++ L +N +
Sbjct: 859 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 918
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K G PE Y LI GLC+ G ++TA + +E+ P + + +++
Sbjct: 919 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 978
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K +L M + + T++ K G + EA + M G++LD
Sbjct: 979 LAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD 1038
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG-LCKAGNIKGARLHL 299
+VSYN LI C +G + A+ L +EM+ GF + T+ LI G L + GA + L
Sbjct: 1039 LVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIIL 1098
Query: 300 EYMNKIGFDSNLE 312
+ + GF +++
Sbjct: 1099 KDLLARGFITSMS 1111
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 125/393 (31%), Positives = 204/393 (51%), Gaps = 39/393 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLI C+ GY +L MR+ I P+ VTYN+LI G + + + LL+EML
Sbjct: 268 MLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSF 327
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ ++N+L+ G EA ++F M LTP ++ ++L+GLCKN D A
Sbjct: 328 GLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLA 387
Query: 121 ----LRMFR---------------GLQKHGFV----------------PELVTYNILIKG 145
+RM R GL K+GF+ P++VTY+ LI G
Sbjct: 388 RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 447
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
CK GR +TA+ I+ + G +PN I Y+T++ C R K + I AM +G+T D
Sbjct: 448 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 507
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
F + ++ + K G++ EA ++M M +DG+ + VS++ LIN Y G+ A+ + D
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 567
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM K G +T+ L+ GLCK G+++ A L+ ++ + + YN ++ + K G
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCK 354
+ A+++F M + DS+TY+S++ LC+
Sbjct: 628 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 660
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 179/366 (48%), Gaps = 4/366 (1%)
Query: 6 YCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD 65
YC+ F A +L+ M+ G+ DV TYN LI R++ ++ LL +M + I P+
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297
Query: 66 VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 125
+YN+L++ GK A+++ +M+ L+P TFN +++G AL+MF
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357
Query: 126 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 185
++ G P V+Y +L+ GLCK AR + +G ITYT ++ +N
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
+ +L+ M + G D Y +I F K+GR K A + + ++ G+ + + Y+
Sbjct: 418 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 477
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
TLI C+ G L+ A + + M +G D +T +L+ LCKAG + A + M
Sbjct: 478 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 537
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSA 361
G N +++C+++ G G+ A +VF+ M FTY S++ LCK L A
Sbjct: 538 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 597
Query: 362 SKLLLS 367
K L S
Sbjct: 598 EKFLKS 603
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 191/399 (47%), Gaps = 6/399 (1%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
++ L M + I PDV T+N LI S L+ +M + G P + +YN+++H
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 237
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
+ G+ A + M + T+N++++ LC++ + R ++K P
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
VTYN LI G G++ A +L E+ G +PN +T+ ++ +K L++
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M+ KG T Y ++ K A + +M +GV + ++Y +I+ CK G
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
L+ A +LL+EM K G + D T++ LI+G CK G K A+ + + ++G N Y+
Sbjct: 418 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 477
Query: 316 CIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++ + G + AI ++E+M +D FT++ +V +LCKA ++ A + +
Sbjct: 478 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 537
Query: 372 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
G+ + +++G +SG +A + + M K+ H
Sbjct: 538 GILPNTVSFDCLINGYGNSGEGLKAFSVFDE--MTKVGH 574
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 179/377 (47%), Gaps = 5/377 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ D +LN M + GI PD+VTY++LI G + + +++ + +G
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ Y++L++ ++G EA R+++ MI T TFN+++ LCK A
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R + G +P V+++ LI G +G A + E+ GH P TY +++K
Sbjct: 529 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + L ++ D Y T++ A K G L +A +MV + D
Sbjct: 589 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQG-FECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y +LI+ C++GK A L E E +G +K +T +DG+ KAG K E
Sbjct: 649 YTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFRE 708
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAK 356
M+ +G ++ N ++D + GKI+ ++ M ++ TY+ ++H K K
Sbjct: 709 QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 768
Query: 357 RLPSASKLLLSCLKSGV 373
+ ++ L S + +G+
Sbjct: 769 DVSTSFLLYRSIILNGI 785
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 180/376 (47%), Gaps = 6/376 (1%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
+P V Y+ LI R ++ SL++ M G P V++ N+++ + + G+
Sbjct: 122 NPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
++M+ + P ATFNI++N LC + + + + ++K G+ P +VTYN ++ C
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K GR + A +L + G + TY ++ R+ + G +L M+++ +
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y T+I F G++ A+ + +M++ G+ + V++N LI+ + EG + A + M
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 359
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
E +G + ++ +L+DGLCK AR M + G Y ++D L K+G +
Sbjct: 360 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419
Query: 328 DHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
D A+ + M D TYS++++ CK R +A +++ + G+ +
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479
Query: 384 VDGLRHSGCRREAKKI 399
+ GC +EA +I
Sbjct: 480 IYNCCRMGCLKEAIRI 495
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/432 (20%), Positives = 180/432 (41%), Gaps = 52/432 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS---------------- 45
L+ A C+ + ++ M + I PD TY SLI+G R
Sbjct: 619 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 678
Query: 46 -------LLSCSLD-------------LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
+ +C +D ++M +G PD+ + N+++ ++GK ++
Sbjct: 679 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 738
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
N + +M + P T+NI+L+G K + + ++R + +G +P+ +T + L+ G
Sbjct: 739 NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 798
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
+C++ L ILK G + T+ ++ C N + +++ M G + D
Sbjct: 799 ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 858
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+++ + R +E+ + +M G+ + Y LIN C+ G ++ A+++ +
Sbjct: 859 KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 918
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM + ++ L K G A L L +M K+ + ++ ++ K+G
Sbjct: 919 EMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNG 978
Query: 326 KIDHAINVFESMEVK----------DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
NV E++E++ D +Y+ ++ LC + A +L G
Sbjct: 979 ------NVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLA 1032
Query: 376 LKSAQKAVVDGL 387
+ KA++ GL
Sbjct: 1033 NATTYKALIRGL 1044
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 143/312 (45%), Gaps = 1/312 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ Y + + + + GI PD +T +SL+ G +++L L +L +
Sbjct: 759 ILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICR 818
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ D +++N L+ G+ + A + + M ++ T + M++ L +N +
Sbjct: 819 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 878
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K G PE Y LI GLC+ G ++TA + +E+ P + + +++
Sbjct: 879 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 938
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K +L M + + T++ K G + EA + M G++LD
Sbjct: 939 LAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD 998
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG-LCKAGNIKGARLHL 299
+VSYN LI C +G + A+ L +EM+ GF + T+ LI G L + GA + L
Sbjct: 999 LVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIIL 1058
Query: 300 EYMNKIGFDSNL 311
+ + GF +++
Sbjct: 1059 KDLLARGFITSM 1070
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 216/407 (53%), Gaps = 7/407 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI YC+ + +L+RM +SPDVVTYN+++ + L ++++LD ++
Sbjct: 185 VLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQR 241
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV +Y L+ + +A ++ +M P T+N+++NG+CK D A
Sbjct: 242 ECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEA 301
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+R + +G P ++T+NI+++ +C GR A L E+ G +P+ +T+ ++
Sbjct: 302 IRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINF 361
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R +++L M + G T + Y ++ A K +++ A +Y++ MV+ G D
Sbjct: 362 LCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPD 421
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+YNTL+ CK+GK++ A +L+++ +G T+ +IDGL K G A L+
Sbjct: 422 IVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLD 481
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF---ESMEVK-DSFTYSSMVHNLCKAK 356
M G ++ Y+ +V L ++GK+D AI F E M VK ++ TY+S++ LCKA+
Sbjct: 482 EMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKAR 541
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ A L + G + +++ +++GL + G +EA ++ +++
Sbjct: 542 QTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNEL 588
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 157/301 (52%), Gaps = 9/301 (2%)
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N+ + L + G+ +E + +DM+C P ++ GLCK T A R+ L+
Sbjct: 114 NNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILED 173
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G VP+++TYN+LI G CK G + +A +L + S P+ +TY TI++ + K K
Sbjct: 174 SGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVS---PDVVTYNTILRTLCDSGKLKE 230
Query: 190 GLEILS-AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
+E+L M+R+ Y D Y +I A K + +A +++M G + D+V+YN LI
Sbjct: 231 AMEVLDRQMQRECYP-DVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 289
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
N CKEG+L+ A L+ M G + + TH I++ +C G A L M + G
Sbjct: 290 NGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCS 349
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 364
++ +N +++ L + G I AI+V E M +S +Y+ ++H LCK K++ A +
Sbjct: 350 PSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEY 409
Query: 365 L 365
L
Sbjct: 410 L 410
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 184/377 (48%), Gaps = 7/377 (1%)
Query: 32 VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 91
V N+ + RN L L++M+ G PD+ + SL+ L + GK +A RV +
Sbjct: 111 VENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEI 170
Query: 92 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
+ P T+N++++G CK +AL++ L + P++VTYN +++ LC +G+
Sbjct: 171 LEDSGAVPDVITYNVLISGYCKTGEIGSALQL---LDRMSVSPDVVTYNTILRTLCDSGK 227
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
L+ A +L P+ ITYT +++ + +++L M+ KG D Y
Sbjct: 228 LKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNV 287
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+I K GRL EA ++ M + G Q +++++N ++ C G+ A L EM ++G
Sbjct: 288 LINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKG 347
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
T ILI+ LC+ G I A LE M + G N +YN ++ L KD K++ AI
Sbjct: 348 CSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAI 407
Query: 332 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ M + D TY++++ LCK ++ A ++L G + V+DGL
Sbjct: 408 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGL 467
Query: 388 RHSGCRREAKKIQSKIR 404
G +A K+ +++
Sbjct: 468 SKVGKTDDAIKLLDEMK 484
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 120/253 (47%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
L M G SP VVT+N LI R L+ ++D+L++M + G P+ SYN L+H L +
Sbjct: 340 LAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCK 399
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
K + A M+ P T+N +L LCK+ D A+ + L G P L+T
Sbjct: 400 DKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLIT 459
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
YN +I GL K G+ A +L E+ G P+ ITY+T++ R K + ++
Sbjct: 460 YNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLE 519
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
G + Y +++ K + A D++ MV G + SY LI EG +
Sbjct: 520 EMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAK 579
Query: 259 AAYLLLDEMEKQG 271
A LL+E+ +G
Sbjct: 580 EALELLNELCSRG 592
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 123/237 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ +L +M + G +P+ ++YN L+ ++ + +++ LD M+
Sbjct: 357 ILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSR 416
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN+L+ L + GK D A + + +P T+N +++GL K TD+A
Sbjct: 417 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDA 476
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ ++ G P+++TY+ L+ GL + G++ A +L + G PNAITY +IM
Sbjct: 477 IKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLG 536
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ R+ ++ L+ M +G Y +I G KEA + + ++ + GV
Sbjct: 537 LCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGV 593
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 104/213 (48%), Gaps = 1/213 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A C+ D ILN++ G SP ++TYN++I G ++ ++ LLDEM G
Sbjct: 428 LLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKG 487
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ +Y++L+ L + GK DEA F D+ + P T+N ++ GLCK R T A+
Sbjct: 488 LKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAI 547
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ G P +Y ILI+GL G + A +L EL G + ++K
Sbjct: 548 DFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVKIP 607
Query: 182 FRNRKYKLGLEIL-SAMKRKGYTFDGFGYCTVI 213
F + L +L + + F G G+ ++
Sbjct: 608 FNVFYFYFLLHLLFNGLGSHREIFVGVGFFMIL 640
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 202/395 (51%), Gaps = 4/395 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ D + + G PD TYN+L+ G + +++++D ML
Sbjct: 278 VLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLG 337
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD+++YNSL+ L +LG+ +EA ++ M+ D +P T+N +++ LCK D A
Sbjct: 338 GLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEA 397
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ R L G +P++ T+N LI+GLC + ++A + +E+ G P+ TY ++
Sbjct: 398 TEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDS 457
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+RK + L +L M+ G + Y T+I F K R++EA + ++M GV D
Sbjct: 458 LCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRD 517
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+YNTLI+ CK ++E A L+D+M +G DK+T+ L+ CK G+IK A ++
Sbjct: 518 SVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQ 577
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G + ++ Y ++ L K G++ A + S+++K Y+ ++ L K
Sbjct: 578 TMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRN 637
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
R A +L L K V GL + G
Sbjct: 638 RTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGG 672
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 200/402 (49%), Gaps = 4/402 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ Y + + D I +M E G VT N LI G + + +L + E + G
Sbjct: 244 IMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEG 303
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD ++YN+L++ L ++G A V M+ G L P T+N +++GLCK + A+
Sbjct: 304 FRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAV 363
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + P VTYN +I LCK R+ A I + L G P+ T+ ++++
Sbjct: 364 KILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGL 423
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +K +++ MK KG D F Y +I + +L+EA + +++M +G ++
Sbjct: 424 CLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNV 483
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V YNTLI+ +CK ++E A + DEME QG D T+ LIDGLCK+ ++ A ++
Sbjct: 484 VIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQ 543
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M G + YN ++ K G I A ++ ++M D TY++++ LCKA R
Sbjct: 544 MIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGR 603
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ AS+LL S G+ + A V+ L EA ++
Sbjct: 604 VQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRL 645
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 197/414 (47%), Gaps = 40/414 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMR-EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
+ +++Y +F +D I+ M E I PD YN L+ + L M+
Sbjct: 137 IFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVR 196
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
I DV ++N L+ L + + A + ++M L+P TF ++ G + D
Sbjct: 197 RRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDG 256
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
ALR+ + ++G VT N+LI G CK GR+ A ++E G P+ TY T++
Sbjct: 257 ALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVN 316
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ K +E++ AM G D + Y ++I+ K+G ++EA ++QMV+
Sbjct: 317 GLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSP 376
Query: 240 DIVSYNTLINLYCKEGKLE-----------------------------------AAYLLL 264
+ V+YN +I+ CKE +++ +A L
Sbjct: 377 NAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLF 436
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+EM+ +G D++T+ +LID LC + ++ A L+ M G N+ YN ++D K+
Sbjct: 437 EEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKN 496
Query: 325 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
+I+ A +F+ ME+ +DS TY++++ LCK+KR+ A++L+ + G+R
Sbjct: 497 KRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLR 550
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 136/328 (41%), Gaps = 78/328 (23%)
Query: 115 RYTDN--ALRMFRGLQKH-GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG----- 166
R TD ALR+F K FVP Y +++ L KAG R +L+E+ SG
Sbjct: 73 RQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDR 132
Query: 167 -------------------------------HAPNAITYTTIMKCCFRNRKYKLGLEILS 195
P+ Y ++ K KL S
Sbjct: 133 GIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHS 192
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY----------- 244
+M R+ D + +I A K +++ A ME+M + G+ D ++
Sbjct: 193 SMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGG 252
Query: 245 ------------------------NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
N LIN +CK+G+++ A + E +GF D++T+
Sbjct: 253 NLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYN 312
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
L++GLCK G+ K A ++ M G D ++ YN ++ L K G+I+ A+ + + M +
Sbjct: 313 TLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSR 372
Query: 341 D----SFTYSSMVHNLCKAKRLPSASKL 364
D + TY++++ +LCK R+ A+++
Sbjct: 373 DCSPNAVTYNAIISSLCKENRVDEATEI 400
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ +C+ I+ M +G +PD+VTY +LI+G + + + LL + G
Sbjct: 559 LLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKG 618
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR-YTDNA 120
+ +YN ++ LF+ + EA R+F++M+ P T+ I+ GLC A
Sbjct: 619 MVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEA 678
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLC 147
+ + + G +PE ++ +L +GLC
Sbjct: 679 VDFTVEMIERGNIPEFSSFVMLAEGLC 705
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 213/407 (52%), Gaps = 5/407 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-EM 60
+I +C+ ++ T+L+RM+ G SPDVVT+N +I + +L + +E+L +
Sbjct: 50 VISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDN 109
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P + +Y L+ G DEA ++ +M+ L P T T+N++ GLCK D A
Sbjct: 110 NCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRA 169
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R L G P+++TYNIL++ L G+ + E+ G PN +TY+ ++
Sbjct: 170 FEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISS 229
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R+ K + + ++ MK KG T D + Y +IAAF + G+L A ++++ M+ DG D
Sbjct: 230 LCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPD 289
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+YNT++ CK G + A + ++++ G + ++ ++ L +G+ A +
Sbjct: 290 IVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMIS 349
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
M G D ++ YN ++ L +DG +D AI + M + +Y +++ LCKA
Sbjct: 350 QMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAH 409
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
R+ A ++L + +++G + ++ +++G+ SG R +A ++ + +
Sbjct: 410 RIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSL 456
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 166/348 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+AY D +L+ M G+ PD TYN + G + + + + + +
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +YN L+ L GK DE + ++ P T++I+++ LC++ + +
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEES 239
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + +++ G P+ Y+ LI C+ G+L A L + G P+ + Y TIM
Sbjct: 240 VNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAA 299
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+N +EI + G + Y T+++A G A + QM++ G+ D
Sbjct: 300 LCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPD 359
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++YN+LI+ C++G ++ A LL +M F+ + ++ ++ GLCKA I A L
Sbjct: 360 VITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLA 419
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSM 348
M + G N Y +++ +G G A+ + S+ + ++ + S
Sbjct: 420 AMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIMNAISEDSF 467
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 163/345 (47%), Gaps = 6/345 (1%)
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
PDV L+ F D+A RV ++ P +N +++G CK ++A +
Sbjct: 8 PDVILCTKLIKGFFNSRNIDKATRVMG-ILEKHGKPDVFAYNAVISGFCKANRIESAKTV 66
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE-LGDSGHAPNAITYTTIMKCCF 182
+++ GF P++VT+NI+I C G++ A + +E L D+ P ITYT +++
Sbjct: 67 LDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYI 126
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
L++L M +G D F Y + K G++ A +++ + + G + D++
Sbjct: 127 LEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVI 186
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
+YN L+ +GK + + E+ +G E + T++ILI LC+ G I+ + ++ M
Sbjct: 187 TYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVM 246
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRL 358
+ G + Y+ ++ ++GK+D AI + M + D Y++++ LCK
Sbjct: 247 KEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNG 306
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A ++ + G S+ ++ L SG R A + S++
Sbjct: 307 DHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQM 351
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 6/212 (2%)
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M K Y D +I F + +AT M + G + D+ +YN +I+ +CK +
Sbjct: 1 MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANR 59
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYN 315
+E+A +LD M+++GF D TH I+I C G I A ++ E + L Y
Sbjct: 60 IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119
Query: 316 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
+++ +G ID A+ + + M + D+FTY+ + LCK ++ A + + +
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179
Query: 372 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
G + ++ L + G E +K S+I
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEI 211
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/393 (31%), Positives = 204/393 (51%), Gaps = 39/393 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLI C+ GY +L MR+ I P+ VTYN+LI G + + + LL+EML
Sbjct: 268 MLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSF 327
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ ++N+L+ G EA ++F M LTP ++ ++L+GLCKN D A
Sbjct: 328 GLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLA 387
Query: 121 ----LRMFR---------------GLQKHGFV----------------PELVTYNILIKG 145
+RM R GL K+GF+ P++VTY+ LI G
Sbjct: 388 RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 447
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
CK GR +TA+ I+ + G +PN I Y+T++ C R K + I AM +G+T D
Sbjct: 448 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 507
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
F + ++ + K G++ EA ++M M +DG+ + VS++ LIN Y G+ A+ + D
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 567
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM K G +T+ L+ GLCK G+++ A L+ ++ + + YN ++ + K G
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCK 354
+ A+++F M + DS+TY+S++ LC+
Sbjct: 628 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 660
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 179/366 (48%), Gaps = 4/366 (1%)
Query: 6 YCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD 65
YC+ F A +L+ M+ G+ DV TYN LI R++ ++ LL +M + I P+
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297
Query: 66 VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 125
+YN+L++ GK A+++ +M+ L+P TFN +++G AL+MF
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357
Query: 126 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 185
++ G P V+Y +L+ GLCK AR + +G ITYT ++ +N
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
+ +L+ M + G D Y +I F K+GR K A + + ++ G+ + + Y+
Sbjct: 418 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 477
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
TLI C+ G L+ A + + M +G D +T +L+ LCKAG + A + M
Sbjct: 478 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 537
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSA 361
G N +++C+++ G G+ A +VF+ M FTY S++ LCK L A
Sbjct: 538 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 597
Query: 362 SKLLLS 367
K L S
Sbjct: 598 EKFLKS 603
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 191/399 (47%), Gaps = 6/399 (1%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
++ L M + I PDV T+N LI S L+ +M + G P + +YN+++H
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 237
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
+ G+ A + M + T+N++++ LC++ + R ++K P
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
VTYN LI G G++ A +L E+ G +PN +T+ ++ +K L++
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M+ KG T Y ++ K A + +M +GV + ++Y +I+ CK G
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
L+ A +LL+EM K G + D T++ LI+G CK G K A+ + + ++G N Y+
Sbjct: 418 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 477
Query: 316 CIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++ + G + AI ++E+M +D FT++ +V +LCKA ++ A + +
Sbjct: 478 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 537
Query: 372 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
G+ + +++G +SG +A + + M K+ H
Sbjct: 538 GILPNTVSFDCLINGYGNSGEGLKAFSVFDE--MTKVGH 574
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 179/377 (47%), Gaps = 5/377 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ D +LN M + GI PD+VTY++LI G + + +++ + +G
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ Y++L++ ++G EA R+++ MI T TFN+++ LCK A
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R + G +P V+++ LI G +G A + E+ GH P TY +++K
Sbjct: 529 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + L ++ D Y T++ A K G L +A +MV + D
Sbjct: 589 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQG-FECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y +LI+ C++GK A L E E +G +K +T +DG+ KAG K E
Sbjct: 649 YTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFRE 708
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAK 356
M+ +G ++ N ++D + GKI+ ++ M ++ TY+ ++H K K
Sbjct: 709 QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 768
Query: 357 RLPSASKLLLSCLKSGV 373
+ ++ L S + +G+
Sbjct: 769 DVSTSFLLYRSIILNGI 785
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 180/376 (47%), Gaps = 6/376 (1%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
+P V Y+ LI R ++ SL++ M G P V++ N+++ + + G+
Sbjct: 122 NPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
++M+ + P ATFNI++N LC + + + + ++K G+ P +VTYN ++ C
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K GR + A +L + G + TY ++ R+ + G +L M+++ +
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y T+I F G++ A+ + +M++ G+ + V++N LI+ + EG + A + M
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 359
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
E +G + ++ +L+DGLCK AR M + G Y ++D L K+G +
Sbjct: 360 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419
Query: 328 DHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
D A+ + M D TYS++++ CK R +A +++ + G+ +
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479
Query: 384 VDGLRHSGCRREAKKI 399
+ GC +EA +I
Sbjct: 480 IYNCCRMGCLKEAIRI 495
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/432 (20%), Positives = 180/432 (41%), Gaps = 52/432 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS---------------- 45
L+ A C+ + ++ M + I PD TY SLI+G R
Sbjct: 619 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 678
Query: 46 -------LLSCSLD-------------LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
+ +C +D ++M +G PD+ + N+++ ++GK ++
Sbjct: 679 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 738
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
N + +M + P T+NI+L+G K + + ++R + +G +P+ +T + L+ G
Sbjct: 739 NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 798
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
+C++ L ILK G + T+ ++ C N + +++ M G + D
Sbjct: 799 ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 858
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+++ + R +E+ + +M G+ + Y LIN C+ G ++ A+++ +
Sbjct: 859 KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 918
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM + ++ L K G A L L +M K+ + ++ ++ K+G
Sbjct: 919 EMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNG 978
Query: 326 KIDHAINVFESMEVK----------DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
NV E++E++ D +Y+ ++ LC + A +L G
Sbjct: 979 ------NVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLA 1032
Query: 376 LKSAQKAVVDGL 387
+ KA++ GL
Sbjct: 1033 NATTYKALIRGL 1044
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 143/312 (45%), Gaps = 1/312 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ Y + + + + GI PD +T +SL+ G +++L L +L +
Sbjct: 759 ILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICR 818
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ D +++N L+ G+ + A + + M ++ T + M++ L +N +
Sbjct: 819 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 878
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K G PE Y LI GLC+ G ++TA + +E+ P + + +++
Sbjct: 879 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 938
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K +L M + + T++ K G + EA + M G++LD
Sbjct: 939 LAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD 998
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG-LCKAGNIKGARLHL 299
+VSYN LI C +G + A+ L +EM+ GF + T+ LI G L + GA + L
Sbjct: 999 LVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIIL 1058
Query: 300 EYMNKIGFDSNL 311
+ + GF +++
Sbjct: 1059 KDLLARGFITSM 1070
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 213/407 (52%), Gaps = 6/407 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + + + +L+RM+ G PDVVTYN +I L +L++ +E+L+
Sbjct: 144 LISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDN 203
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y L+ G D A ++ +M+ L P T T+N ++ G+CK D A
Sbjct: 204 CEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAF 263
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ R L G P+++TYNIL++ L G+ ++ E+ G PN +T++ ++
Sbjct: 264 ELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTL 323
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ K + + +L +MK KG D + Y +IA F + GRL AT+++E M++DG DI
Sbjct: 324 CRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDI 383
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHLE 300
V+YNT++ C+ GK + A + +++++ G + ++ L L +G+ + + L+
Sbjct: 384 VNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILK 443
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
+N+ G D + YN ++ L +DG +D AI + M+ + +Y+ ++ LCK
Sbjct: 444 LLNQ-GIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVN 502
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
R A ++L + + G + ++ +++G+ SG R EA ++ + +
Sbjct: 503 RANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSL 549
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 191/399 (47%), Gaps = 5/399 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ ++ L M + G +PDV+ LI G + + + ++ E+LE
Sbjct: 75 LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVM-EILERY 133
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV++YN+L+ + + + ANRV M P T+NIM+ C D AL
Sbjct: 134 GKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F L K P ++TY ILI+ G + A +L E+ G P+ +TY I++
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGM 253
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ E+L ++ +G D Y ++ + G+ E + +M++ G + ++
Sbjct: 254 CKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNV 313
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+++ LI C++GK+E A LL M+++G + D Y + LI G C+ G + A LEY
Sbjct: 314 VTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEY 373
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G ++ YN I+ L + GK D A+ VFE ++ + +Y+++ L +
Sbjct: 374 MISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGD 433
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
A +++L L G+ + +++ L G EA
Sbjct: 434 RYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEA 472
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 167/347 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+A D +L+ M G+ PD +TYN++I G + ++ + +LL +
Sbjct: 213 ILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSR 272
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN L+ L GK E ++ +MI P T +I++ LC++ + A
Sbjct: 273 GCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEA 332
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + R +++ G P+ Y+ LI G C+ GRL A L+ + G P+ + Y TIM
Sbjct: 333 VNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAG 392
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R K LE+ + G + Y T+ +A G A + + +++ G+ D
Sbjct: 393 LCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPD 452
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++YN+LI+ C++G ++ A LL +M+ + + ++ I++ GLCK A L
Sbjct: 453 EITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLA 512
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS 347
M + G N Y +++ +G G A+ + S+ ++ + S
Sbjct: 513 AMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGMNAISEDS 559
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 218/412 (52%), Gaps = 4/412 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++A + + + ++ A +PDVV+Y+ LI R +L+++ EM G
Sbjct: 15 LLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKG 74
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P++W+YN+L+ CL + G+ DEA R+ +M P T+N +++ L K A
Sbjct: 75 CKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAF 134
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++ G VP+ TYN LI GL K GR + A +L+E+ G P+ +TY++++
Sbjct: 135 TLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGL 194
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + ++ MKR+G D + ++ A K GR+ +A + +++M GV+ +
Sbjct: 195 GKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGV 254
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN LI + K G L AY LLDEM++ G + D T++ LI GL KA + A L+
Sbjct: 255 VTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKK 314
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M K G + YN +++ LGK G ++ A +F+ M+ K D TYS+++ L KA R
Sbjct: 315 MEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAAR 374
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+ SA L G++ +++ L +G +A ++ S++R +S
Sbjct: 375 VESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLS 426
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 189/361 (52%), Gaps = 4/361 (1%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
+T+ MRE G PD TYNSLI G + +++LL+EM G PPDV +Y+SL+
Sbjct: 134 FTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITG 193
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
L + G+ +A ++FQ+M P + TF +++ L K D+AL + +++ G P
Sbjct: 194 LGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPG 253
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
+VTYN LI G K G L A +L E+ +G P+ +TY+ ++ + + ++L
Sbjct: 254 VVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLK 313
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M+++G D Y T+I K G L +A ++M + G D+V+Y+TLI K
Sbjct: 314 KMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAA 373
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
++E+A +L +EME G + D +T+ +I L KAG + A M G ++ YN
Sbjct: 374 RVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYN 433
Query: 316 CIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++ LG+ G+ A +FE M+ + D TY +++ L K K + A LL ++
Sbjct: 434 AFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQ 493
Query: 372 G 372
G
Sbjct: 494 G 494
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 209/402 (51%), Gaps = 4/402 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI++ + ++A ++ M+ G P++ TYN+L+ + +L LL EM + G
Sbjct: 50 LINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNG 109
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV +YN L+ L + G+ EA +F +M P T T+N ++ GL K + A+
Sbjct: 110 CVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAM 169
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ +++HG P+++TY+ LI GL K G A + +E+ G P++IT+T +M
Sbjct: 170 ELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDAL 229
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + LE+L MK +G Y +IA F K+G L EA + +++M +G + D+
Sbjct: 230 GKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDV 289
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y+ LI K +L+ A +L +MEK+G D T+ LI+GL KAG + A +
Sbjct: 290 VTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDR 349
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M G + ++ Y+ ++ LGK +++ A +FE ME D FTY S++ L KA +
Sbjct: 350 MKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQ 409
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ A +L G+ A ++ L G +EA+KI
Sbjct: 410 VDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKI 451
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/376 (31%), Positives = 191/376 (50%), Gaps = 4/376 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D + FD +L MR+ G PDV TYN LI+ + LS + L EM E G
Sbjct: 85 LVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERG 144
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD ++YNSL++ L ++G+ +A + ++M P T++ ++ GL K+ T A
Sbjct: 145 CVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAF 204
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F+ +++ G P+ +T+ L+ L KAGR+ A +L E+ + G P +TY ++
Sbjct: 205 KLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGF 264
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +L MKR G D Y +I +K +L EA +++M +G D
Sbjct: 265 GKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDT 324
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YNTLIN K G L A L D M+ +G D T++ LI L KA ++ A + E
Sbjct: 325 ITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEE 384
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M +G +L Y I+ LGK G++D A +F M K D TY++ +++L + R
Sbjct: 385 MESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGR 444
Query: 358 LPSASKLLLSCLKSGV 373
A K+ +SG+
Sbjct: 445 FKEARKIFEDMKESGL 460
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 180/349 (51%), Gaps = 5/349 (1%)
Query: 61 GIP-PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G P P+V +YNSL++ L + G+ +EA +F+++ TP +++ ++N L + +
Sbjct: 3 GFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEA 62
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
AL + +Q G P L TYN L+ L KAG+ A +L E+ D+G P+ TY ++
Sbjct: 63 ALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLIS 122
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + + + M+ +G D F Y ++I K+GR ++A + +E+M G
Sbjct: 123 TLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPP 182
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+++Y++LI K+G+ A+ L EM+++G + D T T L+D L KAG + A L
Sbjct: 183 DVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELL 242
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
+ M + G + YN ++ GK G + A N+ + M+ D TYS ++ L KA
Sbjct: 243 DEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKA 302
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+L A ++L K G +++GL +G +A ++ +++
Sbjct: 303 SQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMK 351
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 172/355 (48%), Gaps = 4/355 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + + Y +L+ M+ G PDVVTY+ LI G + S L + +L +M + G
Sbjct: 260 LIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEG 319
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PPD +YN+L++ L + G ++A R+F M P T++ ++ L K ++A
Sbjct: 320 CPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESAC 379
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ G P+L TY +I L KAG++ A + E+ G +P+ ITY +
Sbjct: 380 VLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSL 439
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R ++K +I MK G D Y ++ K + +A +++++ G D
Sbjct: 440 GRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDS 499
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ ++ + + G ++ A+ LL +G ++ LID L KAG + A LE
Sbjct: 500 LKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLED 559
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
+ + G ++ +Y+ ++ LG+ G+ID A + E M + +YS++V L
Sbjct: 560 LKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LIDA + + L ++E G PD+V+Y+SLI+ + + + +LL+EM + G
Sbjct: 540 LIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRG 599
Query: 62 IPPDVWSYNSLMHCLFQLG 80
+ SY++L+ L G
Sbjct: 600 LKLSPRSYSNLVRKLQDWG 618
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 208/400 (52%), Gaps = 7/400 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI YC+ D +L+RM ++PDVVTYN+++ + L ++++LD L+
Sbjct: 132 VLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQK 188
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV +Y L+ + +A ++ +M P T+N+++NG+CK D A
Sbjct: 189 ECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEA 248
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + +G P ++T+NI+++ +C GR A +L ++ G +P+ +T+ ++
Sbjct: 249 IKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINF 308
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R ++IL M G T + Y ++ F K ++ A +Y++ MV+ G D
Sbjct: 309 LCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPD 368
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+YNTL+ CK+GK++ A +L+++ +G T+ +IDGL K G + A L+
Sbjct: 369 IVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLD 428
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + G ++ Y+ +V L ++GK+D AI F +E ++ TY+S++ LCK++
Sbjct: 429 EMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSR 488
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ A L + + ++ +++G+ + G +EA
Sbjct: 489 QTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEA 528
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 177/366 (48%), Gaps = 7/366 (1%)
Query: 43 RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 102
RN L L+ M+ G PD+ SL+ ++GK +A V + + P
Sbjct: 69 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 128
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
T+N++++G CK+ DNAL++ L + P++VTYN +++ LC +G+L+ A +L
Sbjct: 129 TYNVLISGYCKSGEIDNALQV---LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 185
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
P+ ITYT +++ + +++L M+ KG D Y +I K GRL
Sbjct: 186 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 245
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
EA ++ M + G Q +++++N ++ C G+ A LL +M ++G T IL
Sbjct: 246 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL 305
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 340
I+ LC+ G + A LE M G N +YN ++ K+ K+D AI + M +
Sbjct: 306 INFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 365
Query: 341 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
D TY++++ LCK ++ A ++L G + V+DGL G A K
Sbjct: 366 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIK 425
Query: 399 IQSKIR 404
+ ++R
Sbjct: 426 LLDEMR 431
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 127/272 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ + C + +L+ M G SP VVT+N LI R LL ++D+L++M
Sbjct: 269 IILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMH 328
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ SYN L+H + K D A M+ P T+N +L LCK+ D A
Sbjct: 329 GCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVA 388
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + L G P L+TYN +I GL K G+ A +L E+ G P+ ITY++++
Sbjct: 389 VEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSG 448
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R K ++ ++ G + Y +++ K + A D++ M++ +
Sbjct: 449 LSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPT 508
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
+Y LI EG + A LL+E+ +G
Sbjct: 509 EATYTILIEGIAYEGLAKEALDLLNELCSRGL 540
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 7/187 (3%)
Query: 216 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
V+ G L++ ++E MV G DI+ +LI +C+ GK + A +++ +E+ G D
Sbjct: 67 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126
Query: 276 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
T+ +LI G CK+G I A L+ ++++ ++ YN I+ L GK+ A+ V +
Sbjct: 127 VITYNVLISGYCKSGEIDNA---LQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183
Query: 336 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
K D TY+ ++ CK + A KLL G + +++G+ G
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243
Query: 392 CRREAKK 398
EA K
Sbjct: 244 RLDEAIK 250
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID + + +L+ MR G+ PD++TY+SL++G +R + ++ ++ +G
Sbjct: 410 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 469
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+ +YNS+M L + + D A MI P AT+ I++ G+ AL
Sbjct: 470 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 529
Query: 122 RMFRGLQKHGFVPELVTYNILIK 144
+ L G V + + +K
Sbjct: 530 DLLNELCSRGLVKKSSAEQVAVK 552
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 208/400 (52%), Gaps = 7/400 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI YC+ D +L+RM ++PDVVTYN+++ + L ++++LD L+
Sbjct: 189 VLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQK 245
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV +Y L+ + +A ++ +M P T+N+++NG+CK D A
Sbjct: 246 ECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEA 305
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + +G P ++T+NI+++ +C GR A +L ++ G +P+ +T+ ++
Sbjct: 306 IKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINF 365
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R ++IL M G T + Y ++ F K ++ A +Y++ MV+ G D
Sbjct: 366 LCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPD 425
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+YNTL+ CK+GK++ A +L+++ +G T+ +IDGL K G + A L+
Sbjct: 426 IVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLD 485
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + G ++ Y+ +V L ++GK+D AI F +E ++ TY+S++ LCK++
Sbjct: 486 EMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSR 545
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ A L + + ++ +++G+ + G +EA
Sbjct: 546 QTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEA 585
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 177/366 (48%), Gaps = 7/366 (1%)
Query: 43 RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 102
RN L L+ M+ G PD+ SL+ ++GK +A V + + P
Sbjct: 126 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 185
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
T+N++++G CK+ DNAL++ L + P++VTYN +++ LC +G+L+ A +L
Sbjct: 186 TYNVLISGYCKSGEIDNALQV---LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 242
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
P+ ITYT +++ + +++L M+ KG D Y +I K GRL
Sbjct: 243 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 302
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
EA ++ M + G Q +++++N ++ C G+ A LL +M ++G T IL
Sbjct: 303 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL 362
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 340
I+ LC+ G + A LE M G N +YN ++ K+ K+D AI + M +
Sbjct: 363 INFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 422
Query: 341 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
D TY++++ LCK ++ A ++L G + V+DGL G A K
Sbjct: 423 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIK 482
Query: 399 IQSKIR 404
+ ++R
Sbjct: 483 LLDEMR 488
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 127/272 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ + C + +L+ M G SP VVT+N LI R LL ++D+L++M
Sbjct: 326 IILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMH 385
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ SYN L+H + K D A M+ P T+N +L LCK+ D A
Sbjct: 386 GCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVA 445
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + L G P L+TYN +I GL K G+ A +L E+ G P+ ITY++++
Sbjct: 446 VEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSG 505
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R K ++ ++ G + Y +++ K + A D++ M++ +
Sbjct: 506 LSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPT 565
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
+Y LI EG + A LL+E+ +G
Sbjct: 566 EATYTILIEGIAYEGLAKEALDLLNELCSRGL 597
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 7/187 (3%)
Query: 216 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
V+ G L++ ++E MV G DI+ +LI +C+ GK + A +++ +E+ G D
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183
Query: 276 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
T+ +LI G CK+G I A L+ ++++ ++ YN I+ L GK+ A+ V +
Sbjct: 184 VITYNVLISGYCKSGEIDNA---LQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240
Query: 336 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
K D TY+ ++ CK + A KLL G + +++G+ G
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300
Query: 392 CRREAKK 398
EA K
Sbjct: 301 RLDEAIK 307
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID + + +L+ MR G+ PD++TY+SL++G +R + ++ ++ +G
Sbjct: 467 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 526
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+ +YNS+M L + + D A MI P AT+ I++ G+ AL
Sbjct: 527 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 586
Query: 122 RMFRGLQKHGFVPELVTYNILIK 144
+ L G V + + +K
Sbjct: 587 DLLNELCSRGLVKKSSAEQVAVK 609
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 209/406 (51%), Gaps = 7/406 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ YC DA ++ M + PD TYN+LI G +L +LD+ML G
Sbjct: 130 MVAGYCVTGQLDAARRLVADM---PMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRG 186
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV +Y L+ + +A ++ +M P T+N+++NG+C+ D+A+
Sbjct: 187 CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAI 246
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L HG P V+YNI++KGLC A R A ++ E+ G+ PN +T+ ++
Sbjct: 247 EFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFL 306
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + +E+L + + G T + Y ++ AF K ++ A ++E MV+ G DI
Sbjct: 307 CRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDI 366
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
VSYNTL+ C+ G+++AA LL +++ +G ++ +IDGL KAG K A L
Sbjct: 367 VSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNE 426
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF---ESMEVK-DSFTYSSMVHNLCKAKR 357
M G ++ Y+ I L ++ +I+ AI F + M ++ ++ Y++++ LCK +
Sbjct: 427 MVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRE 486
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+A L + + +G +S +++GL + G +EA+++ ++
Sbjct: 487 THNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGEL 532
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 164/330 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++A C+ + +L+ MR G +PD++TYN ++ G + + +++ L +
Sbjct: 196 ILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSH 255
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ SYN ++ L + ++A ++ +M P TFN++++ LC+ + A
Sbjct: 256 GCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPA 315
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + K+G P ++YN ++ CK ++ A ++ + G P+ ++Y T++
Sbjct: 316 MEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTA 375
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + +E+L +K KG T Y TVI K G+ KEA + + +MVT G+Q D
Sbjct: 376 LCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPD 435
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++Y+T+ + C+E ++E A +++ G + + ++ GLCK A
Sbjct: 436 IITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFI 495
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
YM G N Y +++ L +G + A
Sbjct: 496 YMISNGCMPNESTYTILIEGLTYEGLVKEA 525
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 172/376 (45%), Gaps = 41/376 (10%)
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
P N + L + G +EA R+ + M + + ++ LC + T A R+
Sbjct: 57 PHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRV 116
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL-------------------GD 164
+ P+++ YN ++ G C G+L AR ++ ++ G
Sbjct: 117 LAACE-----PDVMAYNAMVAGYCVTGQLDAARRLVADMPMEPDSYTYNTLIRGLCGRGR 171
Query: 165 SGHA-------------PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
+G+A P+ +TYT +++ + YK +++L M+ KG D Y
Sbjct: 172 TGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNV 231
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
V+ + GR+ +A ++++ + + G + + VSYN ++ C + E A L+ EM ++G
Sbjct: 232 VVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKG 291
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
+ + T +LI LC+ G ++ A L+ + K G N +YN I+ K K+D A+
Sbjct: 292 YPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAM 351
Query: 332 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
E M + D +Y++++ LC+ + +A +LL G + + V+DGL
Sbjct: 352 AFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGL 411
Query: 388 RHSGCRREAKKIQSKI 403
+G +EA ++ +++
Sbjct: 412 TKAGKTKEALELLNEM 427
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 129/272 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ C ++ ++ M + G P+VVT+N LI+ R L+ ++++LD++ +
Sbjct: 266 IVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKY 325
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ SYN ++H + K D A + M+ P ++N +L LC+ D A
Sbjct: 326 GCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAA 385
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + L+ G P L++YN +I GL KAG+ + A +L E+ G P+ ITY+TI
Sbjct: 386 VELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSG 445
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + + + ++ G + Y ++ K A D M+++G +
Sbjct: 446 LCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPN 505
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
+Y LI EG ++ A LL E+ +G
Sbjct: 506 ESTYTILIEGLTYEGLVKEARELLGELCSRGV 537
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ A+C+ D + M G PD+V+YN+L+ R + +++LL ++ + G
Sbjct: 337 ILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKG 396
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + SYN+++ L + GK EA + +M+ L P T++ + +GLC+ + A+
Sbjct: 397 CTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAI 456
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R F +Q G P V YN ++ GLCK A + + +G PN TYT +++
Sbjct: 457 RAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGL 516
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGF 207
K E+L + +G G
Sbjct: 517 TYEGLVKEARELLGELCSRGVVSKGL 542
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 202/404 (50%), Gaps = 5/404 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ I+ +C+ IL +M + G P +VT NSL+ G + +S ++ L+D+M+EM
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD ++ +L+H LFQ K EA + + M+ P T+ ++NGLCK D A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + ++K ++V YN +I GLCK + A + ++ G P+ TY ++ C
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV-TDGVQL 239
++ +LS M K D + +I AFVK G+L EA ++MV +
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+V+YNTLI +CK ++E + EM ++G + T+T LI G +A + A++
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKA 355
+ M G ++ YN ++D L +G ++ A+ VFE M+ +D TY++M+ LCKA
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
++ L S GV+ ++ G G + EA +
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 518
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 163/331 (49%), Gaps = 2/331 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C++ D + + N+M GI PDV TYN LI+ S + LL +MLE
Sbjct: 256 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN 315
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PD+ +N+L+ + GK EA +++ +M+ P +N ++ G CK + +
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEG 375
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +FR + + G V VTY LI G +A A+ + K++ G P+ +TY ++
Sbjct: 376 MEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDG 435
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
N + L + M+++ D Y T+I A K G++++ D + GV+ +
Sbjct: 436 LCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPN 495
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+Y T+++ +C++G E A L EM++ G + T+ LI + G+ + ++
Sbjct: 496 VVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIK 555
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
M GF + + + + L DG++D +
Sbjct: 556 EMRSCGFAGDASTFGLVTNML-HDGRLDKSF 585
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 143/331 (43%), Gaps = 39/331 (11%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K D+A +F DM+ P F+ +L+ + K D + + +Q G L TY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
I I C+ +L A IL ++ G+ P+ +T +++ + + ++ M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
GY D + T++ + + EA +E+MV G Q D+V+Y +IN CK G+ + A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
LL++MEK E D + +IDGLCK +
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKH----------------------------- 265
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
+D A ++F ME K D FTY+ ++ LC R AS+LL L+ +
Sbjct: 266 ------MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPD 319
Query: 377 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
A++D G EA+K+ ++ +K
Sbjct: 320 LVFFNALIDAFVKEGKLVEAEKLYDEMVKSK 350
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 93/194 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + Q D + +M G+ PD++TYN L+ G N + +L + + M +
Sbjct: 397 LIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRD 456
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D+ +Y +++ L + GK ++ +F + + P T+ M++G C+ + A
Sbjct: 457 MKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 516
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++ G +P TYN LI+ + G + ++KE+ G A +A T+ +
Sbjct: 517 ALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML 576
Query: 182 FRNRKYKLGLEILS 195
R K L++LS
Sbjct: 577 HDGRLDKSFLDMLS 590
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 4/192 (2%)
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
+L +A MV IV ++ L++ K K + L ++M+ G + YT++
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM--- 337
I I+ C+ + A L M K+G+ ++ N +++ +I A+ + + M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 338 -EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
D+ T++++VH L + + A L+ + G + AV++GL G A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 397 KKIQSKIRMAKI 408
+ +K+ KI
Sbjct: 235 LNLLNKMEKGKI 246
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C + + + M++ + D+VTY ++I + + DL +
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V +Y ++M + G +EA+ +F +M P + T+N ++ ++ +
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAAS 550
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
+ + ++ GF + T+ L+ + GRL
Sbjct: 551 AELIKEMRSCGFAGDASTFG-LVTNMLHDGRL 581
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 193/394 (48%), Gaps = 4/394 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C+ + D + N+M E SPDV TYN LI G + LL EM++ G
Sbjct: 277 LINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYG 336
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +YN+LM L + GK +A + Q M+ D P TFN+M++ CK D A
Sbjct: 337 CEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAY 396
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ + G +P++ TYNI+I G C+A R+ AR +L+ + ++G P+ +TY +I+
Sbjct: 397 ELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGL 456
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + E+ ++ GY D T+I K RL +A + +M +G D+
Sbjct: 457 CKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDV 516
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y LI+ +CK +L+ + EM +G T++I+ID LCK+ ++ + L+
Sbjct: 517 VAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKT 576
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M + G + Y ++D L K D A +++ M+ TY+ +V LCK R
Sbjct: 577 MLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSR 636
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
L A LL G +V DG S
Sbjct: 637 LDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSA 670
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 173/335 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID +C+ D Y + M + G PD+ TYN +I+GA R + + + LL+ M E
Sbjct: 381 LMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEA 440
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PPDV +YNS++ L + + DEA V++ + G T + +++GLCK+R D+A
Sbjct: 441 GCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDA 500
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ R ++++G P++V Y ILI G CKA +L + E+ D G P ITY+ ++
Sbjct: 501 EKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDK 560
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ + + G +L M +G T D Y +VI K EA + + M G
Sbjct: 561 LCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPT 620
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YN L++ CK +L+ A LL+ ME G D T+ + DG K+ A +
Sbjct: 621 VVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQ 680
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
M G Y+ ++ +L + K+D A+ ++E
Sbjct: 681 AMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWE 715
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 201/437 (45%), Gaps = 40/437 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C+ F Y +L+ M + GI P YN++I G N + +L +M +
Sbjct: 173 LINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRN 231
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y L+ L + + +A+ + +DMI P T+N ++NG CK D A+
Sbjct: 232 CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAV 291
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + ++ P++ TYNILI G CK R + +L+E+ G PN ITY T+M
Sbjct: 292 VLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSL 351
Query: 182 FRNRKY-----------------------------------KLGLEILSAMKRKGYTFDG 206
++ KY L E+ M +G D
Sbjct: 352 VKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDI 411
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ Y +I+ + R+ +A +E+M G D+V+YN++++ CK +++ AY + +
Sbjct: 412 YTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEV 471
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
+ G+ D T + LIDGLCK+ + A L M + G ++ AY ++ K +
Sbjct: 472 LRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQ 531
Query: 327 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+D ++ F M V TYS ++ LCK+ R+ LL + L+ GV +
Sbjct: 532 LDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTS 591
Query: 383 VVDGLRHSGCRREAKKI 399
V+DGL S EA ++
Sbjct: 592 VIDGLCKSDSYDEAYEL 608
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 190/375 (50%), Gaps = 5/375 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A+ + Y + R SPD +TY++LI G + + LLDEM + G
Sbjct: 138 LLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 197
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P YN+++ L G+ D A ++DM + P T+ I+++ LCK+ +A
Sbjct: 198 IVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RNCAPSVITYTILVDALCKSARISDAS 256
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P +VTYN LI G CK G + A + ++ ++ +P+ TY ++
Sbjct: 257 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGY 316
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + G ++L M + G + Y T++ + VK G+ +A + + M+ +
Sbjct: 317 CKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSH 376
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++N +I+++CK G+L+ AY L M +G D YT+ I+I G C+A I AR LE
Sbjct: 377 FTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLER 436
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M + G ++ YN IV L K ++D A V+E + D T S+++ LCK++R
Sbjct: 437 MTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRR 496
Query: 358 LPSASKLLLSCLKSG 372
L A KLL ++G
Sbjct: 497 LDDAEKLLREMERNG 511
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 168/342 (49%), Gaps = 5/342 (1%)
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
++ N L+ + K EA +F++ CG +P + T++ ++NG CK R A R+
Sbjct: 133 FTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDE 192
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
++K G VP YN +IKGLC GR+ +A +++ AP+ ITYT ++ ++ +
Sbjct: 193 MEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRNCAPSVITYTILVDALCKSAR 251
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
IL M G + Y T+I F K+G + EA QM+ + D+ +YN
Sbjct: 252 ISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNI 311
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
LI+ YCK+ + + LL EM K G E + T+ L+D L K+G A + M +
Sbjct: 312 LIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD 371
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSAS 362
+ +N ++D K G++D A +F+ M + D +TY+ M+ C+A R+ A
Sbjct: 372 CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDAR 431
Query: 363 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+LL ++G ++V GL + EA ++ +R
Sbjct: 432 QLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLR 473
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 119/239 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ D +L M G +PDVV Y LI G + L SL EML+ G
Sbjct: 487 LIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKG 546
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y+ ++ L + + + + + M+ +TP + +++GLCK+ D A
Sbjct: 547 CVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAY 606
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ +++ G P +VTYN+L+ LCK RL A +L+ + G P+ +TY ++
Sbjct: 607 ELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGF 666
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+++ ++ + AMK +G + F Y ++ V ++ +A + E+ + G +D
Sbjct: 667 WKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVD 725
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 144/347 (41%), Gaps = 70/347 (20%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS--------------- 45
++I C+ D +L RM EAG PDVVTYNS+++G + S
Sbjct: 416 IMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNG 475
Query: 46 -----LLSCS-----------LD----LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
+++CS LD LL EM G PDV +Y L+H + + D++
Sbjct: 476 GYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKS 535
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
F +M+ P T++I+++ LCK+ + + + + + G P+ + Y +I G
Sbjct: 536 LAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDG 595
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCK+ A + K + +G AP +TY +
Sbjct: 596 LCKSDSYDEAYELYKLMKQTGCAPTVVTYNVL---------------------------- 627
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ K+ RL EA +E M +DG D V+YN++ + + K + + A+ L
Sbjct: 628 -------VDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQ 680
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
M+ +G + +++L+ L + A E + G D + E
Sbjct: 681 AMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPE 727
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 198/368 (53%), Gaps = 4/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ + + +M + G PDVVTYN++I ++ L++ +++ L EML+ G
Sbjct: 199 IINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRG 258
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
IPP+V++YN ++H LG+ +EA R+F++M+ D+ P T T I+++GLCK A
Sbjct: 259 IPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEAR 318
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + + G P + TYN L+ G C + A+ + + + G AP +Y ++
Sbjct: 319 LVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGF 378
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++R+ +L+ M K D Y T++ + GR KEA + ++M + G+ ++
Sbjct: 379 CKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNL 438
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y+ L++ +CK G L+ A LL M+++ E + HTILI+G+ AG ++ A+
Sbjct: 439 VTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSK 498
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G + Y ++ L K+G D A ++F ME + +S +Y+ M+ + +
Sbjct: 499 LFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQD 558
Query: 358 LPSASKLL 365
+A +L+
Sbjct: 559 SSTAIRLI 566
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 189/403 (46%), Gaps = 4/403 (0%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
+S D RM P V + + + S + L ++M G+ +V+S
Sbjct: 67 ISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSL 126
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N L++CL +L D A + M + P +TFN ++NGLC A+ +F + +
Sbjct: 127 NVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVR 186
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G P +++YN +I GLCK G A + K++ +G P+ +TY TI+ ++R
Sbjct: 187 RGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVND 246
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+E LS M +G + F Y ++ F +G+L EAT ++MV V D V+ L++
Sbjct: 247 AMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVD 306
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
CKEG + A L+ + M ++G E + T+ L+DG C + A+ E M + G
Sbjct: 307 GLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAP 366
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
+ +YN +++ K ++D A ++ M K D+ TYS+++ LC+ R A +
Sbjct: 367 GVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIF 426
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
G+ ++DG G EA K+ ++ K+
Sbjct: 427 KEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKL 469
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 189/408 (46%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ D +IL +M + GI P T+N+LI G + +++L +EM+
Sbjct: 128 VLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRR 187
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V SYN++++ L + G A VF+ M P T+N +++ LCK+R ++A
Sbjct: 188 GHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDA 247
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P + TYN ++ G C G+L A + KE+ P+ +T T ++
Sbjct: 248 MEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDG 307
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + M KG + Y ++ + + EA E M+ G
Sbjct: 308 LCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPG 367
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ SYN LIN +CK +++ A LL EM + D T++ L+ GLC+ G K A +
Sbjct: 368 VHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFK 427
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G NL Y+ ++D K G +D A+ + +SM+ K + ++ ++ + A
Sbjct: 428 EMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAG 487
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+L A +L G+R ++ GL G EA + K+
Sbjct: 488 KLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKME 535
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 163/330 (49%), Gaps = 4/330 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ +C + + M + PD VT L+ G + ++S + + + M E G
Sbjct: 269 MVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKG 328
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ P++ +YN+LM +CL +L +EA +VF+ MI P ++NI++NG CK+R D
Sbjct: 329 VEPNISTYNALMDGYCLQRLM--NEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDE 386
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + + P+ VTY+ L++GLC+ GR + A I KE+ G PN +TY+ ++
Sbjct: 387 AKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLD 446
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
++ L++L +M+ K + + +I G+L+ A + ++ DG++
Sbjct: 447 GFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRP 506
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
I +Y +I KEG + AY L +ME GF + ++ ++I G + + A +
Sbjct: 507 TIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLI 566
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 329
+ M F +NL + ++D +D I
Sbjct: 567 DEMVGKRFSANLSTFQMLLDLESQDEIISQ 596
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 139/284 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ + M E G+ P++ TYN+L+ G L++ + + + M+
Sbjct: 303 ILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQ 362
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P V SYN L++ + + DEA + +M L P T T++ ++ GLC+ A
Sbjct: 363 GCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEA 422
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F+ + +G +P LVTY+IL+ G CK G L A +LK + + PN + +T +++
Sbjct: 423 LNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEG 482
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F K ++ E+ S + G Y +I +K G EA D +M DG +
Sbjct: 483 MFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPN 542
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
SYN +I + + A L+DEM + F + T +L+D
Sbjct: 543 SCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLD 586
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 201/371 (54%), Gaps = 7/371 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMR--EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
++I C+ +A + +++ M E+G+SPDV+T+NS++ G + + + ++ L
Sbjct: 176 LIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRAL 235
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
E G P+V +Y++L+ L ++ K DEA ++ M+ T T++ +++GL K +
Sbjct: 236 ERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRME 295
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
+A+ + R ++ G +P+ VTYN LI G K RLR A +L+E+ ++G P+ +TYTT+
Sbjct: 296 DAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLC 355
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV- 237
R+ ++ +EIL M +G + Y +++ K GR+ EA Y E+M D V
Sbjct: 356 HGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVV 415
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+++Y+ LI+ CK GK++ AY L+ M + G D T +ILI+GLC AG I
Sbjct: 416 APHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLE 475
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 353
M + G ++ Y +VDRL + ++D A ++F+ M D T +M+H L
Sbjct: 476 LFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLL 535
Query: 354 KAKRLPSASKL 364
+ R A ++
Sbjct: 536 EVNRDEDAKRI 546
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 193/381 (50%), Gaps = 12/381 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMR-EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ID C+ + T+ + M G P VVTY++LI G R+ + LL+EM
Sbjct: 71 MIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGR 130
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ +YN+L++ L G+ EA + + M P TF +++ GLCK + A
Sbjct: 131 GCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAA 190
Query: 121 LR----MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
R MF + + G P+++T+N ++ GLCK R+ A + K + G PN +TY+T
Sbjct: 191 FRVVDEMF--MIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYST 248
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ + K L++L+ M G + Y TV+ +K+GR+++A + QM G
Sbjct: 249 LIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAG 308
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
D V+YNTLI+ + K +L A LL EM + GF T+T L GLC++G A
Sbjct: 309 CLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAV 368
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD-----SFTYSSMVHN 351
L+YM G N Y+ IVD L K G++ A+ FE M + YS+++
Sbjct: 369 EILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDG 428
Query: 352 LCKAKRLPSASKLLLSCLKSG 372
LCKA ++ A + L +++G
Sbjct: 429 LCKAGKIDEAYEFLERMIRAG 449
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 211/446 (47%), Gaps = 48/446 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ D G +L M G +P+ VTYN+L+ + LL++M G
Sbjct: 107 LIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANG 166
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM--ICGDLTPCTATFNIMLNGLCKNRYTDN 119
PP++ ++ ++ L + G+ + A RV +M I L+P TFN +L+GLCK + +
Sbjct: 167 CPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILD 226
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +F+ + G P +VTY+ LI GL K ++ A +L ++ + G N +TY+T++
Sbjct: 227 AHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVD 286
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + + + +L M+ G D Y T+I F K RL+EA + +M+ G
Sbjct: 287 GLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHP 346
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+V+Y TL + C+ G+ + A +LD M +G + T++ ++DGLCKAG + A L
Sbjct: 347 SVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEA---L 403
Query: 300 EYMNKIGFDS----NLEAYNCIVDRLGKDGKIDHAINVFESME----------------- 338
Y K+ D ++ AY+ ++D L K GKID A E M
Sbjct: 404 GYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILING 463
Query: 339 ----------------------VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
V D TY+++V LC+A R+ A L G+
Sbjct: 464 LCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPD 523
Query: 377 KSAQKAVVDGLRHSGCRREAKKIQSK 402
+S ++ ++ GL +AK+IQ +
Sbjct: 524 RSTRRTMIHGLLEVNRDEDAKRIQDE 549
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 210/452 (46%), Gaps = 44/452 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ D T+ +M + I PDVVTY +LI G + + + DL +E G
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTD-- 118
P V +YN+++ L + G+ + A ++ DM I P T++ +++GLC++ D
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 119 ---------------------------------NALRMFRGLQKHGFVPELVTYNILIKG 145
A + + +G PEL+T+ ++IKG
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 146 LCKAGRLRTARWILKELG--DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
LCK G + A ++ E+ +SG +P+ IT+ +++ + ++ + +G
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
+ Y T+I K+ ++ EA + +MV G + + V+Y+T+++ K G++E A ++
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
L +M G D T+ LIDG K ++ A L M + GF ++ Y + L +
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR 360
Query: 324 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS- 378
G+ D A+ + + M + ++ TYSS+V LCKA R+ A + V
Sbjct: 361 SGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVI 420
Query: 379 AQKAVVDGLRHSGCRREAKK-IQSKIRMAKIS 409
A A++DGL +G EA + ++ IR +I
Sbjct: 421 AYSALIDGLCKAGKIDEAYEFLERMIRAGRIP 452
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 202/368 (54%), Gaps = 4/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ + + +M + G P+VVTY+++I ++ L++ +++ L EM+E G
Sbjct: 204 VINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERG 263
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
IPP+V++YNS++H LG+ +EA R+F++M+ D+ P T TF I+++GLCK A
Sbjct: 264 IPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEAR 323
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + + G P++ TYN L+ G C + A+ + + + G AP A +Y ++
Sbjct: 324 LVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGY 383
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++R+ +L+ M K D Y T++ ++GR KEA + ++M + G ++
Sbjct: 384 CKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNL 443
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y L++ +CK G L+ A LL M+++ E + +TILI+G+ AG ++ A+
Sbjct: 444 VTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSK 503
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G ++ Y ++ L K+G D A ++F ME + +S +Y+ M+ + +
Sbjct: 504 LFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQD 563
Query: 358 LPSASKLL 365
+A +L+
Sbjct: 564 SSTAIRLI 571
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 190/408 (46%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ D ++L +M + GI PD +T+N+LI G + +++L +EM++
Sbjct: 133 ILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKR 192
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V SY ++++ L + G A VF+ M P T++ +++ LCK+R ++A
Sbjct: 193 GHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDA 252
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + G P + TYN ++ G C G+L A + KE+ PN +T+T ++
Sbjct: 253 MEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDG 312
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + M KG D Y ++ + + EA E M+ G
Sbjct: 313 LCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPG 372
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
SYN LIN YCK +++ A LL EM + D T++ L+ GLC+ G K A +
Sbjct: 373 AHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFK 432
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G NL Y ++D K G +D A+ + +SM+ K + Y+ ++ + A
Sbjct: 433 EMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAG 492
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+L A +L G R ++ GL G EA + K+
Sbjct: 493 KLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKME 540
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 187/403 (46%), Gaps = 4/403 (0%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
V D RM P VV + + + S + L ++M + +V+S
Sbjct: 72 VCVDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSL 131
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N L++CL +L D + V M + P TFN ++NGLC A+ +F + K
Sbjct: 132 NILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVK 191
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G P +++Y +I GLCK G A + K++ +G PN +TY+TI+ ++R
Sbjct: 192 RGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVND 251
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+E LS M +G + F Y +++ F +G+L EAT ++MV V + V++ L++
Sbjct: 252 AMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVD 311
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
CKEG + A L+ + M ++G E D T+ L+DG C + A+ E M + G
Sbjct: 312 GLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAP 371
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
+YN +++ K ++D A ++ M K D+ TYS+++ LC+ R A L
Sbjct: 372 GAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLF 431
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
G ++DG G EA K+ ++ K+
Sbjct: 432 KEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKL 474
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 162/330 (49%), Gaps = 4/330 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ +C + + M + P+ VT+ L+ G + ++S + + + M E G
Sbjct: 274 IVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKG 333
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ PD+ +YN+LM +CL +L +EA +VF+ MI P ++NI++NG CK+R D
Sbjct: 334 VEPDISTYNALMDGYCLQRLM--NEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDE 391
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + + P+ VTY+ L++GLC+ GR + A + KE+ G PN +TY ++
Sbjct: 392 AKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLD 451
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
++ L++L +MK K + Y +I G+L+ A + ++ DG +
Sbjct: 452 GFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRP 511
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DI +Y +I KEG + AY L +ME GF + ++ ++I G + + A +
Sbjct: 512 DIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLI 571
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 329
+ M F NL + ++D +D I
Sbjct: 572 DEMVGKRFSVNLSTFQMLLDLESQDEIISQ 601
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 137/284 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ + M E G+ PD+ TYN+L+ G L++ + + + M+
Sbjct: 308 ILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRK 367
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P SYN L++ + + DEA + +M L P T T++ ++ GLC+ A
Sbjct: 368 GCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEA 427
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F+ + +G P LVTY IL+ G CK G L A +LK + + PN + YT +++
Sbjct: 428 LNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEG 487
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F K ++ E+ S + G D Y +I +K G EA D +M DG +
Sbjct: 488 MFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPN 547
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
SYN +I + + A L+DEM + F + T +L+D
Sbjct: 548 SCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLD 591
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 193/356 (54%), Gaps = 1/356 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ S I N +R+ G+ P V++N+LI G ++ L L M E
Sbjct: 228 ILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEEN 287
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PDV++Y+ L+H L + G+ D A ++F +M L P TF +++G C++R D+A
Sbjct: 288 RIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSA 347
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + G P+LV YN L+ GLCK G + AR ++ E+ G P+ ITYTT++
Sbjct: 348 MNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDG 407
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + +EI M +G D + +I+ F + GR+++A + +MV G++ D
Sbjct: 408 YCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPD 467
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y +I+ YCK+G ++ + LL EM+ G + T+ +L++GLCK G +K A + LE
Sbjct: 468 DATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLE 527
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF-ESMEVKDSFTYSSMVHNLCKA 355
M +G + YN +++ K+GK + + + E + D Y+S+V K+
Sbjct: 528 AMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKGLIVDYAYYTSLVSEYNKS 583
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 168/322 (52%), Gaps = 4/322 (1%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
E+LE G PP V YN L++ + G +A +F ++ L P T +FN ++NGLCK+R
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSR 272
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D R+ + ++++ P++ TY++LI GLCK GRL A + E+ G PN IT+T
Sbjct: 273 NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFT 332
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
++ R+R+ + M G D Y T++ K+G + +A +++M
Sbjct: 333 ALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMV 392
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G++ D ++Y TLI+ YCKEG LE+A + M ++G D T LI G C+ G ++ A
Sbjct: 393 GMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDA 452
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHN 351
L M + G + Y ++D K G + + + M++ TY+ +++
Sbjct: 453 ERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNG 512
Query: 352 LCKAKRLPSASKLLLSCLKSGV 373
LCK ++ +A+ LL + L GV
Sbjct: 513 LCKQGQMKNANMLLEAMLNLGV 534
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 98/184 (53%), Gaps = 6/184 (3%)
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
+ +++ G + YN LIN +CKEG + A L+ +E+ K+G + LI+GLC
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269
Query: 288 KAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
K+ N+ +G RL + M + ++ Y+ ++ L K+G++D A +F+ M+ + +
Sbjct: 270 KSRNLDEGFRLK-KTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNG 328
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 402
T+++++ C+++R+ SA L GV+ +++GL G +A+K+ +
Sbjct: 329 ITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDE 388
Query: 403 IRMA 406
+RM
Sbjct: 389 MRMV 392
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
+ E+ + GF + ILI+ CK G+I+ A+L + K G ++N +++
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLING 267
Query: 321 LGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
L K +D + ++ME D FTYS ++H LCK RL A +L + G+R
Sbjct: 268 LCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPN 327
Query: 377 KSAQKAVVDG 386
A++DG
Sbjct: 328 GITFTALIDG 337
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 208/406 (51%), Gaps = 7/406 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ YC DA ++ M + PD TYN+LI G + +L +LDEML
Sbjct: 132 MVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRR 188
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV +Y L+ + +A ++ +M TP T+N+++NG+C+ D+A+
Sbjct: 189 CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAI 248
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L +G P V+YNI++KGLC A R A ++ E+G G PN +T+ ++
Sbjct: 249 EFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFL 308
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + LE+L + + G T + Y ++ AF K ++ +A +++ MV+ G DI
Sbjct: 309 CRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDI 368
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
VSYNTL+ C+ G+++ A LL +++ +G ++ +IDGL KAG K A L
Sbjct: 369 VSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNE 428
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF---ESMEVK-DSFTYSSMVHNLCKAKR 357
M G ++ Y+ I L ++ +I+ AI F + M ++ ++ Y++++ LCK +
Sbjct: 429 MVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRE 488
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
SA L + +G +S +++GL + G +EA+ + ++
Sbjct: 489 THSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 534
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 167/337 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++A C+ + +L+ MR+ G +PD+VTYN ++ G + + +++ L +
Sbjct: 198 ILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSY 257
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ SYN ++ L + ++A + +M P TFN++++ LC+ + A
Sbjct: 258 GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 317
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + K+G P ++YN L+ CK ++ A L + G P+ ++Y T++
Sbjct: 318 LEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 377
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R+ + + +E+L +K KG Y TVI K G+ KEA + + +MV+ G+Q D
Sbjct: 378 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 437
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++Y+T+ C+E ++E A +++ G + + +I GLCK A
Sbjct: 438 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFA 497
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
YM G N Y +++ L +G I A ++ + +
Sbjct: 498 YMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 534
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 130/272 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ C ++ ++ M + G P+VVT+N LI+ R L+ +L++L+++ +
Sbjct: 268 IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKY 327
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ SYN L+H + K D+A M+ P ++N +L LC++ D A
Sbjct: 328 GCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 387
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + L+ G P L++YN +I GL KAG+ + A +L E+ G P+ ITY+TI
Sbjct: 388 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 447
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + + + ++ G + Y +I K A D M+ +G +
Sbjct: 448 LCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPN 507
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
+Y LI EG ++ A LLDE+ +G
Sbjct: 508 ESTYTILIEGLAYEGLIKEARDLLDELCSRGV 539
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 141/298 (47%), Gaps = 18/298 (6%)
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ L + G+ DEA R+ D C A ++ L + T A R+
Sbjct: 72 LRSLVRRGELDEALRLVGSARRPDAGTCAA----LIKKLSASGRTAEARRVLAACG---- 123
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGL 191
P+++ YN ++ G C AG+L AR ++ E+ P+A TY T+++ C R R L
Sbjct: 124 -PDVMAYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTAN-AL 178
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+L M R+ D Y ++ A K K+A +++M G DIV+YN ++N
Sbjct: 179 AVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGI 238
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
C+EG+++ A L + G E + ++ I++ GLC A + A + M + G N+
Sbjct: 239 CQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNV 298
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
+N ++ L + G ++ A+ V E + +S +Y+ ++H CK K++ A L
Sbjct: 299 VTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL 356
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID + +LN M G+ PD++TY+++ AG R + ++ ++ +MG
Sbjct: 409 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 468
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+ YN+++ L + + A +F MI P +T+ I++ GL
Sbjct: 469 IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLA--------- 519
Query: 122 RMFRGLQKHG--FVPELVTYNILIKGLCKAGRLR 153
+ GL K + EL + ++ K L G +R
Sbjct: 520 --YEGLIKEARDLLDELCSRGVVRKSLINKGAIR 551
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/439 (30%), Positives = 202/439 (46%), Gaps = 41/439 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ AG + + + G PDVVTYN+LI + L + L M G
Sbjct: 87 IINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRG 146
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYTDN 119
P+V +Y+ L++ L ++G+ DEA + Q+M D+ P T+N L+GLCK T
Sbjct: 147 CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAE 206
Query: 120 ALRMFRGLQ-----------------------------------KHGFVPELVTYNILIK 144
A + R L+ G+VP +VTYN L+
Sbjct: 207 ACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVN 266
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
GLCKA ++ A +++ + D G P+ ITY+ ++ + + LE+L M +G T
Sbjct: 267 GLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTP 326
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ + ++I K R EA Q+ + D V++N LI CK G E A L
Sbjct: 327 NVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALF 386
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+EM + + D T LIDGLCKAG ++ AR L+ M +G N+ YN +V L K
Sbjct: 387 EEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKS 446
Query: 325 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
G+I+ E M V +S TY S+V+ LC+A R A +L+ G
Sbjct: 447 GRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTY 506
Query: 381 KAVVDGLRHSGCRREAKKI 399
+VDGL SG +A +
Sbjct: 507 NILVDGLWKSGKTEQAITV 525
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 180/387 (46%), Gaps = 45/387 (11%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
M G++P +VTYN++I G +++ L ++L +E+++ G PDV
Sbjct: 71 EMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDV-------------- 116
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
T+N +++ LCK + A R+ G+ G VP +VTY+
Sbjct: 117 ---------------------VTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYS 155
Query: 141 ILIKGLCKAGRLRTARWILKELGDSG--HAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
+LI GLCK GR+ AR +++E+ PN ITY + + + E++ +++
Sbjct: 156 VLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLR 215
Query: 199 RKG--YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
+ D + T+I K G+ EA + + M+ G ++V+YN L+N CK K
Sbjct: 216 DGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADK 273
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+E A+ +++ M +G D T+++L+D CKA + A L M G N+ +N
Sbjct: 274 MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNS 333
Query: 317 IVDRLGKDGKIDH----AINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
I+D L K + A+ V+ M V D T++ ++ CKA AS L +
Sbjct: 334 IIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKN 393
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKI 399
++ A++DGL +G A+ I
Sbjct: 394 MQPDVMTFGALIDGLCKAGQVEAARDI 420
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 155/301 (51%), Gaps = 2/301 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ D + M G P+VVTYN+L+ G + + + +++ M++ G
Sbjct: 231 LIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKG 288
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +Y+ L+ + + DEA + M TP TFN +++GLCK+ + A
Sbjct: 289 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAF 348
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + VP+ VT+NILI G CKAG A + +E+ P+ +T+ ++
Sbjct: 349 QIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGL 408
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + +IL M G + Y ++ K GR++E +++E+MV+ G +
Sbjct: 409 CKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPES 468
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y +L+ C+ + + A L+ +++ G++ D T+ IL+DGL K+G + A LE
Sbjct: 469 MTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEE 528
Query: 302 M 302
M
Sbjct: 529 M 529
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 152/293 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ + + ++ M + G++PDV+TY+ L+ + S + +L+LL M G
Sbjct: 264 LVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG 323
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V ++NS++ L + + EA ++ + L P TFNI++ G CK + A
Sbjct: 324 CTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQAS 383
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + P+++T+ LI GLCKAG++ AR IL +G+ G PN +TY ++
Sbjct: 384 ALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGL 443
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + + E L M G + Y +++ A + R +A + ++ + G D
Sbjct: 444 CKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDT 503
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
V+YN L++ K GK E A +L+EM +G + D +T GL ++GN+ G
Sbjct: 504 VTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAG 556
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 145/284 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+DA+C+ D +L+ M G +P+VVT+NS+I G ++ + + ++
Sbjct: 298 VLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNR 357
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD ++N L+ + G ++A+ +F++M+ ++ P TF +++GLCK + A
Sbjct: 358 MLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAA 417
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P +VTYN+L+ GLCK+GR+ L+E+ SG P ++TY +++
Sbjct: 418 RDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYA 477
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + L+++S +K G+ D Y ++ K G+ ++A +E+MV G Q D
Sbjct: 478 LCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPD 537
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
++ + G L LL + +G D T + ++D
Sbjct: 538 SFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 97/197 (49%), Gaps = 9/197 (4%)
Query: 209 YCTVIAAFVKIGRLKEATD-YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y V+ + + G A + + +M DGV IV+YNT+IN CK +L A L +E+
Sbjct: 48 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
K+G D T+ LID LCKAG+++ AR M+ G N+ Y+ +++ L K G+I
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167
Query: 328 DHAINVFESMEVK------DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ- 380
D A + + M K + TY+S + LCK A +L+ S +R+
Sbjct: 168 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 227
Query: 381 -KAVVDGLRHSGCRREA 396
++DGL G EA
Sbjct: 228 FSTLIDGLCKCGQTDEA 244
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 180/342 (52%), Gaps = 3/342 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ +CQ D + G+ P ++ YN+LI G + L+ +L L++EM E G
Sbjct: 441 LVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKG 500
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+W+YN +++ L ++G +AN + D I P T+N +++G C+ D+A+
Sbjct: 501 CKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAI 560
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P+++TYN L+ GLCK + I K + + G APN ITY TI++
Sbjct: 561 ELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESL 620
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLD 240
++K +++L MK KG T D + T+I F K+G L A M V
Sbjct: 621 CNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHT 680
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHL 299
+YN +I+ + ++ ++ A L EM+K G + D YT+ +LIDG CK GN+ +G + L
Sbjct: 681 TATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLL 740
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 341
E + K GF +L + +++ L + K+ A+ + M KD
Sbjct: 741 ENIEK-GFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKD 781
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 176/359 (49%), Gaps = 5/359 (1%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
L++M G P+ TYNS+I G + ++ + +L + + G PD ++Y SL++ Q
Sbjct: 388 LHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQ 447
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
G PD+A VF+D + L P +N ++ GLC+ AL++ + + G P++ T
Sbjct: 448 DGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWT 507
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
YN++I GLCK G L A ++ + G P+ TY T++ R K +E+++ M
Sbjct: 508 YNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMW 567
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
+G T D Y T++ K + +E + + M G +I++YNT+I C K+
Sbjct: 568 SQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVN 627
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA-YNCI 317
A LL EM+ +G D + LI G CK G++ GA M K S+ A YN I
Sbjct: 628 EAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNII 687
Query: 318 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
+ + + A+ +F M+ D++TY ++ CK + K LL ++ G
Sbjct: 688 ISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKG 746
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 187/374 (50%), Gaps = 4/374 (1%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
I ++C+ A +L M G + V Y +++ G + +L DEMLE +
Sbjct: 232 IKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCL 291
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
PDV ++N L+H L + G E+ R+F ++ + P TFNI + GLCK D A+R
Sbjct: 292 CPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVR 351
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ + + G P++VTYN +I GLC+ R+ A L ++ + G PN TY +I+
Sbjct: 352 LLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYC 411
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ IL KG+ D F YC+++ F + G +A + + G++ I+
Sbjct: 412 KKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSII 471
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
YNTLI C++G + A L++EM ++G + D +T+ ++I+GLCK G + A +
Sbjct: 472 VYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDA 531
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 358
G ++ YN +VD + K+D AI + M + D TY+++++ LCK +
Sbjct: 532 ITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKS 591
Query: 359 PSASKLLLSCLKSG 372
++ + + G
Sbjct: 592 EEVMEIFKAMTEKG 605
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 188/402 (46%), Gaps = 4/402 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ +F F+ + + RM++ + DV TY I R +L LL M +G
Sbjct: 196 IMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLG 255
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ +Y +++ ++ G D A +F +M+ L P TFN +++ LCK + +
Sbjct: 256 CFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESE 315
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+F + K G P L T+NI I+GLCK G L A +L + G P+ +TY T++
Sbjct: 316 RLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGL 375
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + E L M G+ + F Y ++I + K G + +A ++ V G + D
Sbjct: 376 CRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDE 435
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y +L+N +C++G + A + + +G + LI GLC+ G I A +
Sbjct: 436 FTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNE 495
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M + G ++ YN I++ L K G + A ++ K D FTY+++V C+ +
Sbjct: 496 MAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLK 555
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L SA +L+ G+ +++GL + E +I
Sbjct: 556 LDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEI 597
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 166/383 (43%), Gaps = 39/383 (10%)
Query: 43 RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 102
R + ++D + M P V+SYN++M+ L + G ++A++V+ M +
Sbjct: 167 RKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVY 226
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHG------------------------------- 131
T+ I + C+ ALR+ R + G
Sbjct: 227 TYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEM 286
Query: 132 ----FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
P++ T+N L+ LCK G + + + ++ G PN T+ ++ +
Sbjct: 287 LECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSL 346
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
+ +L + R+G D Y TVI + R+ EA + + +MV G + + +YN++
Sbjct: 347 DRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSI 406
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
I+ YCK+G + A +L + +GF+ D++T+ L++G C+ G+ A + G
Sbjct: 407 IDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGL 466
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASK 363
++ YN ++ L + G I A+ + M K D +TY+ +++ LCK L A+
Sbjct: 467 RPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANH 526
Query: 364 LLLSCLKSGVRILKSAQKAVVDG 386
L+ + G +VDG
Sbjct: 527 LIGDAITKGCIPDIFTYNTLVDG 549
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 138/316 (43%), Gaps = 4/316 (1%)
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
GK EA F+ M + P ++N ++N L + Y + A +++ ++ ++ TY
Sbjct: 169 GKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTY 228
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
I IK C+ GR A +L+ + G NA+ Y T++ + E+ M
Sbjct: 229 TIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLE 288
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
D + ++ A K G + E+ ++++ GV ++ ++N I CKEG L+
Sbjct: 289 CCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDR 348
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A LL + ++G D T+ +I GLC+ + A L M GF+ N YN I+D
Sbjct: 349 AVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIID 408
Query: 320 RLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
K G + A + + K D FTY S+V+ C+ A + L G+R
Sbjct: 409 GYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRP 468
Query: 376 LKSAQKAVVDGLRHSG 391
++ GL G
Sbjct: 469 SIIVYNTLIKGLCQQG 484
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 98/242 (40%), Gaps = 71/242 (29%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG--------------------- 40
L+D YC+ + D+ ++NRM G++PDV+TYN+L+ G
Sbjct: 546 LVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKG 605
Query: 41 -----ATRNSLLSC---------SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
T N+++ ++DLL EM G+ PDV S+ +L+ ++G D A
Sbjct: 606 CAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAY 665
Query: 87 RVFQDMICG-DLTPCTATFNI-----------------------------------MLNG 110
+F+ M D++ TAT+NI +++G
Sbjct: 666 GLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDG 725
Query: 111 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
CK + + + GF+P L T+ ++ LC +++ A I+ + P+
Sbjct: 726 FCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPD 785
Query: 171 AI 172
+
Sbjct: 786 TV 787
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 119/289 (41%), Gaps = 15/289 (5%)
Query: 115 RYTDNALRMFRGLQK--HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
+Y D +R + ++K GF L TY +++ L G+ +L E+ + N +
Sbjct: 96 KYEDVCIRNLQLIKKTKQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEM--RSNLDNTL 153
Query: 173 ---TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
Y M+ R K + ++ M + Y ++ V+ G +A
Sbjct: 154 LEGVYVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVY 213
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
+M V+ D+ +Y I +C+ G+ AA LL M G + + ++ G +
Sbjct: 214 MRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEF 273
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 345
G+ AR + M + ++ +N +V L K G + + +F+ + + + FT+
Sbjct: 274 GDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTF 333
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
+ + LCK L A +LL + G+R V+ GL CR+
Sbjct: 334 NIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGL----CRK 378
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 48/102 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I A+ + ++ + + M++ G PD TY LI G + ++ L E +E
Sbjct: 686 IIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEK 745
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 102
G P + ++ +++CL K EA + M+ D+ P T
Sbjct: 746 GFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTV 787
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 204/402 (50%), Gaps = 4/402 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ G ++L+ M G+ PD V Y +LI G + S + + + +EM
Sbjct: 308 LIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARK 367
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I + ++Y +L+H L ++G ++A +F +M + P T+N ++ G K + + A
Sbjct: 368 IKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAY 427
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++K ++ GLC G L A + +E+ G PN + YTTI+K
Sbjct: 428 ELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGL 487
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +++ ++IL MK +G + D F Y TVI F K G+++E Y+ +M+ G++ ++
Sbjct: 488 VKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNV 547
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y I+ YC+ G+++AA EM G + T LIDG CK GN A
Sbjct: 548 YTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRC 607
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
M G +++ ++ ++ L K+GK+ A+ VF + V D FTY+S++ NLCK
Sbjct: 608 MLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGD 667
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L +A +L K G+ A+++GL G +A+++
Sbjct: 668 LKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKAREL 709
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 185/388 (47%), Gaps = 5/388 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F+ IL M++ G+SPDV YN++I G + + L EM+ G+ P+V++Y +
Sbjct: 493 FEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGA 552
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
+H + G+ A R F +M+ + P +++G CK+ T A FR + G
Sbjct: 553 FIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQG 612
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
+P++ T+++LI GL K G+L+ A + EL D G P+ TYT+++ + K
Sbjct: 613 VLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAF 672
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
E+ M +KG + Y +I K+G + +A + + + G+ + V+Y+T+I Y
Sbjct: 673 ELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGY 732
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
CK L A+ L M+ G D + + LIDG CKAGN + A M + G S
Sbjct: 733 CKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIAST- 791
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
A+N ++D K GK+ A + E M + TY+ ++ C + A +L +
Sbjct: 792 PAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFME 851
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRRE 395
K V +++ G G R E
Sbjct: 852 MQKRNVMPNVLTYTSLLHGYNRIGRRSE 879
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 163/342 (47%), Gaps = 4/342 (1%)
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PDV++Y +L++ ++GK +E V DM P T+++++ GLC+ D A
Sbjct: 227 AIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEA 286
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + R + G +P+ Y LI G C+ R + +L E+ G P+ + YT ++
Sbjct: 287 LELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALING 346
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ M + + F Y +I KIG L++A D +M G++ D
Sbjct: 347 FVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPD 406
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I +YN LI Y K +E AY LL E++K+ + Y +++GLC G++ A +
Sbjct: 407 IQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQ 466
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G N+ Y IV L K+G+ + AI + M+ + D F Y++++ CKA
Sbjct: 467 EMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAG 526
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
++ L+ + G++ A + G +G + A++
Sbjct: 527 KMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAER 568
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 191/443 (43%), Gaps = 41/443 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
I YC+ A M ++GI+P+ V LI G ++ + + ML+ G
Sbjct: 553 FIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQG 612
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +++ L+H L + GK EA VF +++ L P T+ +++ LCK A
Sbjct: 613 VLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAF 672
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K G P +VTYN LI GLCK G + AR + + + G A N++TY+TI+
Sbjct: 673 ELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGY 732
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ ++ MK G D F YC +I K G ++A MV +G+
Sbjct: 733 CKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIA-ST 791
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++N LI+ + K GKL AY L+++M + T+TILI+ C GNIK A
Sbjct: 792 PAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFME 851
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH------- 350
M K N+ Y ++ + G+ ++F+ M + D +S MV
Sbjct: 852 MQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGN 911
Query: 351 ----------------------------NLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
LCK L K+L K G ++ +
Sbjct: 912 WIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGT 971
Query: 383 VVDGLRHSGCRREAKKI-QSKIR 404
+V +G EA ++ +S +R
Sbjct: 972 LVCCFHRAGRTDEALRVLESMVR 994
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 183/415 (44%), Gaps = 40/415 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ + + M + G+ PDV T++ LI G ++N L ++ + E+L+ G
Sbjct: 588 LIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKG 647
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV++Y SL+ L + G A + DM + P T+N ++NGLCK A
Sbjct: 648 LVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKAR 707
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F G+ + G VTY+ +I G CK+ L A + + G P++ Y ++ C
Sbjct: 708 ELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGC 767
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + L + M +G + +I F K+G+L EA +E MV + + +
Sbjct: 768 CKAGNTEKALSLFLGMVEEGIA-STPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNH 826
Query: 242 VSYNTLINLYCKEGKLEAA-----------------------------------YLLLDE 266
V+Y LI +C G ++ A + L DE
Sbjct: 827 VTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDE 886
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M +G + D ++++D K GN A ++ M G + Y ++D L K
Sbjct: 887 MVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNN 946
Query: 327 IDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
+ + V + +E + S T ++V +A R A ++L S ++S + +L+
Sbjct: 947 LSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMVRSFLNLLE 1001
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C + + M++ + P+V+TY SL+ G R S L DEM+
Sbjct: 831 ILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVAR 890
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD +++ ++ + G +A ++ DM+ + C + I+++ LCK+
Sbjct: 891 GIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEV 950
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
L++ ++K G L T L+ +AGR A +L+ +
Sbjct: 951 LKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM 992
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 209/408 (51%), Gaps = 9/408 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ A+C D+ ++L M + G P+ V Y +LI ++ + ++ +L LL+EM M
Sbjct: 222 VVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLM 281
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD ++N ++ L + + +EA ++ M+ P T+ ++NGLCK D A
Sbjct: 282 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA 341
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS-GHAPNAITYTTIMK 179
+F + K PE+V +N LI G GRL A+ +L ++ S G P+ TY +++
Sbjct: 342 KDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
++ L LE+L M+ KG + + Y ++ F K+G++ EA + + +M DG++
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ V +N LI+ +CKE ++ A + EM ++G + D YT LI GLC+ IK A L
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
M G +N YN +++ + G+I A + M + D TY+S++ LC+A
Sbjct: 518 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA 577
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ A L L+ G + +++GL SG EA + Q ++
Sbjct: 578 GEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM 625
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 180/362 (49%), Gaps = 5/362 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREA-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
LI + D +L+ M + GI PDV TYNSLI G + L+ +L++L +M
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V+SY L+ +LGK DEA V +M L P T FN +++ CK A
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +FR + + G P++ T+N LI GLC+ ++ A W+L+++ G N +TY T++
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + K ++++ M +G D Y ++I + G + +A E+M+ DG
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+S N LIN C+ G +E A EM +G D T LI+GLC+AG I+
Sbjct: 599 NISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFR 658
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKI-DHAINVFESME---VKDSFTYSSMVHNLCKAK 356
+ G + +N ++ L K G + D + + E +E V + T+S ++ ++ +
Sbjct: 659 KLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQE 718
Query: 357 RL 358
L
Sbjct: 719 TL 720
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 182/380 (47%), Gaps = 9/380 (2%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P +YN ++ + + ++ +ML IPP ++++ +M + + D A +
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
+DM P + + +++ L K + AL++ + G VP+ T+N +I GLCK
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
R+ A ++ + G AP+ ITY +M + + ++ + +
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI---- 355
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
+ T+I FV GRL +A + MVT G+ D+ +YN+LI Y KEG + A +L +M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
+G + + Y++TIL+DG CK G I A L M+ G N +NC++ K+ +I
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 328 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
A+ +F M K D +T++S++ LC+ + A LL + GV +
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 384 VDGLRHSGCRREAKKIQSKI 403
++ G +EA+K+ +++
Sbjct: 536 INAFLRRGEIKEARKLVNEM 555
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 153/298 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D +C+ D Y +LN M G+ P+ V +N LI+ + + ++++ EM
Sbjct: 429 ILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV+++NSL+ L ++ + A + +DMI + T T+N ++N + A
Sbjct: 489 GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 548
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G + +TYN LIKGLC+AG + AR + +++ GHAP+ I+ ++
Sbjct: 549 RKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILING 608
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R+ + +E M +G T D + ++I + GR+++ ++ +G+ D
Sbjct: 609 LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPD 668
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
V++NTL++ CK G + A LLLDE + GF + T +IL+ + + R +
Sbjct: 669 TVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRFY 726
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 120/284 (42%), Gaps = 15/284 (5%)
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM----KCCFR 183
++G+ Y +LI L G +T +L ++ D G + +IM K F
Sbjct: 103 SQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFP 162
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
+ +L LE+ + + TF Y V+ V K A + M++ + + +
Sbjct: 163 GQTTRLMLEMRNVYSCEP-TFK--SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFT 219
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
+ ++ +C ++++A LL +M K G + + LI L K + A LE M
Sbjct: 220 FGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 279
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLP 359
+G + E +N ++ L K +I+ A + M ++ D TY +++ LCK R+
Sbjct: 280 LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVD 339
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+A L K + I + ++ G G +AK + S +
Sbjct: 340 AAKDLFYRIPKPEIVIFNT----LIHGFVTHGRLDDAKAVLSDM 379
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 109/264 (41%), Gaps = 1/264 (0%)
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL-RTARWILKE 161
+ +++ L N R+ ++ G V + + +++ KAG +T R +L+
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
P +Y +++ +K+ + M + F + V+ AF +
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
+ A + M G + V Y TLI+ K ++ A LL+EM G D T
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 341
+I GLCK I A + M GF + Y +++ L K G++D A ++F + +
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Query: 342 SFTYSSMVHNLCKAKRLPSASKLL 365
+++++H RL A +L
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVL 376
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 208/406 (51%), Gaps = 7/406 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ YC DA ++ M + PD TYN+LI G + +L +LDEML
Sbjct: 6 MVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRR 62
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV +Y L+ + +A ++ +M TP T+N+++NG+C+ D+A+
Sbjct: 63 CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAI 122
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L +G P V+YNI++KGLC A R A ++ E+G G PN +T+ ++
Sbjct: 123 EFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFL 182
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + LE+L + + G T + Y ++ AF K ++ +A +++ MV+ G DI
Sbjct: 183 CRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDI 242
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
VSYNTL+ C+ G+++ A LL +++ +G ++ +IDGL KAG K A L
Sbjct: 243 VSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNE 302
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF---ESMEVK-DSFTYSSMVHNLCKAKR 357
M G ++ Y+ I L ++ +I+ AI F + M ++ ++ Y++++ LCK +
Sbjct: 303 MVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRE 362
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
SA L + +G +S +++GL + G +EA+ + ++
Sbjct: 363 THSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 408
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 167/337 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++A C+ + +L+ MR+ G +PD+VTYN ++ G + + +++ L +
Sbjct: 72 ILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSY 131
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ SYN ++ L + ++A + +M P TFN++++ LC+ + A
Sbjct: 132 GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 191
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + K+G P ++YN L+ CK ++ A L + G P+ ++Y T++
Sbjct: 192 LEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 251
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R+ + + +E+L +K KG Y TVI K G+ KEA + + +MV+ G+Q D
Sbjct: 252 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 311
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++Y+T+ C+E ++E A +++ G + + +I GLCK A
Sbjct: 312 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFA 371
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
YM G N Y +++ L +G I A ++ + +
Sbjct: 372 YMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 408
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 117/234 (50%), Gaps = 9/234 (3%)
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILS 195
+ YN ++ G C AG+L AR ++ E+ P+A TY T+++ C R R L +L
Sbjct: 1 MAYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTAN-ALAVLD 56
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M R+ D Y ++ A K K+A +++M G DIV+YN ++N C+EG
Sbjct: 57 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 116
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
+++ A L + G E + ++ I++ GLC A + A + M + G N+ +N
Sbjct: 117 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 176
Query: 316 CIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
++ L + G ++ A+ V E + +S +Y+ ++H CK K++ A L
Sbjct: 177 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL 230
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 197/360 (54%), Gaps = 5/360 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ + + + + G+ P VV++N+LI+G ++ + L M
Sbjct: 253 VLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESE 312
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV+++++L++ L + G+ DE + +F +M L P TF +++G CK D A
Sbjct: 313 GVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLA 372
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L+ F+ + G P+LVTYN LI GLCK G L+ AR ++ E+ SG P+ IT+TT++
Sbjct: 373 LKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDG 432
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C ++ + LEI M +G D + +I+ + GR+ +A + M++ G + D
Sbjct: 433 CCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPD 492
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y +I+ +CK+G ++ + LL EM+ G T+ L++GLCK G +K A++ L+
Sbjct: 493 DPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLD 552
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDG-KIDHAINVFESME--VKDSFTYSSMVHNLCKAKR 357
M +G N YN ++D K G +D +++F S + V D +Y+++V+ K +
Sbjct: 553 AMLNVGVAPNDITYNILLDGHSKHGSSVD--VDIFNSEKGLVTDYASYTALVNESSKTSK 610
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 167/340 (49%), Gaps = 4/340 (1%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
E+L+ G PP ++ +N LMH + G A VF ++ L P +FN +++G CK+
Sbjct: 238 EVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSG 297
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
+ R+ ++ G P++ T++ LI GLCK GRL + E+ G PN +T+T
Sbjct: 298 DVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFT 357
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T++ + K L L+ M +G D Y +I K+G LKEA + +M
Sbjct: 358 TLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTAS 417
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G++ D +++ TLI+ CK+G +E+A + M ++G E D T LI GLC+ G + A
Sbjct: 418 GLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDA 477
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 351
L M GF + Y ++D K G + + + M+ V TY+++++
Sbjct: 478 GRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNG 537
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
LCK ++ +A LL + L GV ++DG G
Sbjct: 538 LCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHG 577
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 110/223 (49%), Gaps = 8/223 (3%)
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
R + L LE+L + GY + + ++ F K G + A +++ G++ +VS+
Sbjct: 231 RSWALYLEVLDS----GYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSF 286
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
NTLI+ CK G +E + L ME +G D +T + LI+GLCK G + L + M
Sbjct: 287 NTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCG 346
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPS 360
G N + ++D K GK+D A+ F+ M + D TY+++++ LCK L
Sbjct: 347 RGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKE 406
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A +L+ SG++ K ++DG G A +I+ ++
Sbjct: 407 ARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRM 449
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 119/281 (42%), Gaps = 24/281 (8%)
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL-QKHGFVPELVTYNILIKGLCKAGR 151
I LTP + I LN LC + L F L + F L +Y ++ LC
Sbjct: 77 ILPSLTPRHVSKLITLNPLCLP--PSSLLSFFNHLASRPPFRHTLHSYCTMLHFLCLHRM 134
Query: 152 LRTARWILKELGDSGHAPNAIT-YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
L A ++ L +A T +++I++ R+ + + G FD
Sbjct: 135 LPQAHSLVSFLVSRKGTNSASTLFSSILRTMPRHHHHHHSV---------GLVFDA---- 181
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN--LYCKEGKLEAAYLLLDEME 268
+I+A+V G +A + + + I L+ + + ++E ++ L E+
Sbjct: 182 -LISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSWALYLEVL 240
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
G+ Y +L+ G CKAG++ ARL + + K G + ++N ++ K G ++
Sbjct: 241 DSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVE 300
Query: 329 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
+ ME + D FT+S++++ LCK RL S L
Sbjct: 301 EGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLF 341
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 207/395 (52%), Gaps = 4/395 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ +C+ + + + E G SPD VT+NSL+ G R ++ +LD++D M+E
Sbjct: 233 VLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEK 292
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV++YNSL+ + +LG+ ++A + Q MI + +P T T+N +++ LCK + A
Sbjct: 293 GFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAA 352
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ R L G +P++ T+N LI+GLC + A + +E+ + G P+ TY+ ++
Sbjct: 353 TDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDS 412
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R+ K L +L M+ G + Y T+I K R+++A + +QM GV
Sbjct: 413 LCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRS 472
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+YNTLI+ CK ++E A L+D+M +G + DK+T+ L+ C+ G+I+ A ++
Sbjct: 473 SVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQ 532
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G + ++ Y ++ L + G++D A + S+++K Y+ ++ L K
Sbjct: 533 TMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRK 592
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
R +L ++ K V GL + G
Sbjct: 593 RTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGG 627
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 190/359 (52%), Gaps = 4/359 (1%)
Query: 20 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 79
++M GI DV T+N LI + L ++ +L+EM G+ PD ++ +LM +
Sbjct: 147 SKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEE 206
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
G + A ++ + M+ + +++NG CK + ALR + + GF P+ VT+
Sbjct: 207 GDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTF 266
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
N L+ G C+ G + A I+ + + G P+ TY +++ + +++ +EIL M
Sbjct: 267 NSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMIL 326
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
+ + + Y T+I+A K ++ ATD +V+ G+ D+ ++NTLI C +
Sbjct: 327 RECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDI 386
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A + +EM+ +G + D++T++ILID LC +K A + L+ M G N YN ++D
Sbjct: 387 AMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLID 446
Query: 320 RLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
L K +I+ A +F+ ME+ + S TY++++ LCK KR+ AS+L+ + G++
Sbjct: 447 GLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLK 505
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 196/426 (46%), Gaps = 39/426 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI A C+ +L M G+ PD +T+ +L+ G L+ +L + +ML
Sbjct: 163 VLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGY 222
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G S L++ + G+ +EA R ++ +P TFN ++NG C+ ++A
Sbjct: 223 GCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDA 282
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK- 179
L + + + GF P++ TYN LI G+CK G A IL+++ +PN +TY T++
Sbjct: 283 LDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISA 342
Query: 180 --------------------------CCFR--------NRKYKLGLEILSAMKRKGYTFD 205
C F ++ + +E+ MK KG D
Sbjct: 343 LCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPD 402
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
F Y +I + RLKEA +++M + G + V YNTLI+ CK ++E A + D
Sbjct: 403 EFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFD 462
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+ME G T+ LIDGLCK ++ A ++ M G + YN ++ + G
Sbjct: 463 QMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVG 522
Query: 326 KIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
I+ A ++ ++M D FTY +++ LC+A R+ ASKLL S G+ + A
Sbjct: 523 DIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYN 582
Query: 382 AVVDGL 387
V+ L
Sbjct: 583 PVIQAL 588
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 195/446 (43%), Gaps = 84/446 (18%)
Query: 8 QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 67
Q SFD+ T+L +++ +G P+ T+ +LI T + L +L+ E+G PD
Sbjct: 67 QSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILEN--ELGFKPD-- 122
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
T +NI LN L + DN L++ L
Sbjct: 123 ---------------------------------TNFYNIALNALVE----DNKLKLVEML 145
Query: 128 QK----HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
G V ++ T+N+LIK LCKA +LR A +L+E+ + G P+ IT+TT+M+
Sbjct: 146 HSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIE 205
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
L++ M G ++ F K GR++EA ++ ++ +G D V+
Sbjct: 206 EGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVT 265
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
+N+L+N +C+ G + A ++D M ++GF+ D YT+ LI G+CK G + A L+ M
Sbjct: 266 FNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMI 325
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKI-----------------------------------D 328
N YN ++ L K+ +I D
Sbjct: 326 LRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQD 385
Query: 329 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 384
A+ +FE M+ K D FTYS ++ +LC +RL A LL SG ++
Sbjct: 386 IAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLI 445
Query: 385 DGLRHSGCRREAKKIQSKIRMAKISH 410
DGL S +A++I ++ + +S
Sbjct: 446 DGLCKSRRIEDAEEIFDQMELLGVSR 471
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 41/263 (15%)
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
L+ L ++ + +LK+L SG PNA T+ T+++ + + L+IL G
Sbjct: 61 LLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILE--NELG 118
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ D Y + A V+ +LK +MV +G+ LD+ ++N LI CK +L A
Sbjct: 119 FKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAI 178
Query: 262 LLLDEMEKQGFECDKYTHT-----------------------------------ILIDGL 286
L+L+EM G + D+ T T +L++G
Sbjct: 179 LMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGF 238
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G ++ A + +++ GF + +N +V+ + G ++ A+++ + M K D
Sbjct: 239 CKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDV 298
Query: 343 FTYSSMVHNLCKAKRLPSASKLL 365
+TY+S++ +CK A ++L
Sbjct: 299 YTYNSLISGMCKLGEFEKAIEIL 321
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 208/406 (51%), Gaps = 7/406 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ YC D ++ M + PD TYN+LI G +L +LD+ML G
Sbjct: 126 MVAGYCVTGQLDNARRLVAAM---PMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRG 182
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV +Y L+ + +A ++ +M P T+N+++NG+C+ D+A+
Sbjct: 183 CVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAM 242
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L +G P V+YNI++KGLC A R A ++ E+ G PN +T+ ++
Sbjct: 243 EFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFL 302
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + +EIL + + G T + Y ++ AF K ++ A ++E MV+ G DI
Sbjct: 303 CRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDI 362
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
VSYNTL+ C+ G+++AA LL +++ +G ++ +IDGL KAG + A L
Sbjct: 363 VSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNE 422
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF---ESMEVK-DSFTYSSMVHNLCKAKR 357
M G ++ Y+ I L ++G+I+ AI F + M ++ ++ Y++++ LCK +
Sbjct: 423 MVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRA 482
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
SA L + +G +S +++GL + G +EA+++ +++
Sbjct: 483 THSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAEL 528
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 167/330 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++A C+ + +L+ MR+ G +PD+VTYN ++ G + + +++ L +
Sbjct: 192 ILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSY 251
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ SYN ++ L + ++A ++ +M P TFN++++ LC+ + A
Sbjct: 252 GCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPA 311
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + K+G P ++YN ++ CK ++ A ++ + SG P+ ++Y T++
Sbjct: 312 MEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTA 371
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + +E+L +K KG T Y TVI K G+ +EA + + +MVT G+Q D
Sbjct: 372 LCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPD 431
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++Y+T+ + C+EG++E A +++ G + + ++ GLCK A
Sbjct: 432 IITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFT 491
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
YM G N Y +++ L +G + A
Sbjct: 492 YMVSNGCMPNESTYTILIEGLAYEGLVKEA 521
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 135/296 (45%), Gaps = 35/296 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ C ++ ++ M G P+VVT+N LI+ R L+ ++++LD++ +
Sbjct: 262 IVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKY 321
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ SYN ++H + K D A + M+ P ++N +L LC+ D A
Sbjct: 322 GCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAA 381
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + L+ G P L++YN +I GL KAG+ A +L E+ G P+ ITY+TI
Sbjct: 382 VELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTI--- 438
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
G C + GR++EA ++ G++ +
Sbjct: 439 -------------------------SSGLC-------REGRIEEAIKAFCKVQDMGIRPN 466
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
V YN ++ CK +A L M G ++ T+TILI+GL G +K AR
Sbjct: 467 TVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAR 522
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 153/320 (47%), Gaps = 21/320 (6%)
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT---PCTATFNIMLNGLCKNRYT 117
+P + N + L + G +EA R+ + M + + PC A ++ LC + T
Sbjct: 51 AVPHRSAASNDRLRVLVRRGDLEEAIRLVESMAGLEPSAAGPCAA----LIKKLCASGRT 106
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
A R+ + P++++YN ++ G C G+L AR ++ + P+ TY T+
Sbjct: 107 AEARRVLASCE-----PDVMSYNAMVAGYCVTGQLDNARRLVAAM---PMEPDTYTYNTL 158
Query: 178 MK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ C R R L +L M R+G D Y ++ A K K+A +++M G
Sbjct: 159 IRGLCGRGRTDN-ALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKG 217
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
DIV+YN ++N C+EG+++ A L + G E + ++ I++ GLC A + A
Sbjct: 218 CAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAE 277
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNL 352
+ M++ G N+ +N ++ L + G ++ A+ + + + +S +Y+ ++H
Sbjct: 278 KLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAF 337
Query: 353 CKAKRLPSASKLLLSCLKSG 372
CK K++ A + + SG
Sbjct: 338 CKQKKMDRAMAFVELMVSSG 357
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 116/237 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLI C+ + IL+++ + G +P+ ++YN ++ + + ++ ++ M+
Sbjct: 297 MLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSS 356
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ SYN+L+ L + G+ D A + + TP ++N +++GL K T+ A
Sbjct: 357 GCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEA 416
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + G P+++TY+ + GLC+ GR+ A ++ D G PN + Y I+
Sbjct: 417 LELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLG 476
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ R +++ + M G + Y +I G +KEA + M ++ + GV
Sbjct: 477 LCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGV 533
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/375 (32%), Positives = 197/375 (52%), Gaps = 7/375 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
+RE G PD T+N L+ G ++ + +L+++D ML G PD+++YNSL+ L +LG+
Sbjct: 293 LRE-GFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGE 351
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
DEA +V MI D +P T T+N +++ LCK + A ++ L G +P++ TYN
Sbjct: 352 VDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNS 411
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM-KCCFRNRKYKLGLEILSAMKRK 200
LI+GLC + A + KE+ G P+ TY ++ CFR K + L +L M+
Sbjct: 412 LIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRG-KLQEALNLLKEMEVS 470
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G + Y T+I F K R+ EA + +QM GV + V+YNTLI+ CK ++E A
Sbjct: 471 GCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEA 530
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
L+D+M +G DK+T+ L+ CKAG+IK A ++ M G + ++ Y ++
Sbjct: 531 SQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAG 590
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
L K G+++ A + ++++K Y+ ++ L + KR A +L ++
Sbjct: 591 LCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPD 650
Query: 377 KSAQKAVVDGLRHSG 391
K V GL G
Sbjct: 651 AVTYKIVFRGLCQGG 665
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 208/455 (45%), Gaps = 75/455 (16%)
Query: 20 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 79
+ M GI PDV T+N LI R + ++ L++EM + G+ PD ++ ++M +
Sbjct: 184 SNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEE 243
Query: 80 GKPDEANRVFQDMI------------------CGD------------------LTPCTAT 103
G D A RV + M+ C + P T
Sbjct: 244 GNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYT 303
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
FN+++NGL K + +AL + + + GF P++ TYN LI GLCK G + A +L ++
Sbjct: 304 FNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMI 363
Query: 164 DSGHAPNAITYTTIMK---------------------------CCFRN--------RKYK 188
+ +PN +TY TI+ C + + R +
Sbjct: 364 ERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHT 423
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
+ +E+ MK KG D F Y +I + G+L+EA + +++M G ++++YNTLI
Sbjct: 424 VAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLI 483
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
+ +CK ++ A + D+ME QG + T+ LIDGLCK+ ++ A ++ M G
Sbjct: 484 DGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLR 543
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKL 364
+ YN ++ K G I A ++ ++M D TY +++ LCKA R+ +A+KL
Sbjct: 544 PDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKL 603
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L + G+ + A V+ L +EA ++
Sbjct: 604 LRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRL 638
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 192/442 (43%), Gaps = 82/442 (18%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSL---IAGATRNSLLSCSLDLLDEM-LEMGIPPDVW 67
FDA IL M+ IS V+ +SL I L + L +D M +E G+ +
Sbjct: 105 FDAMKDILKEMK---ISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTH 161
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
YN L++ L K +M+ + P +TFNI++ LC+ A+ + +
Sbjct: 162 FYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEM 221
Query: 128 QKHGFVPELVTYNILIK-----------------------------------GLCKAGRL 152
+ G +P+ T+ +++ G CK GR+
Sbjct: 222 EDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRI 281
Query: 153 RTARWILKELG-DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
A ++E+ G P+ T+ ++ + K LE++ M R+G+ D + Y +
Sbjct: 282 EEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNS 341
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE------------- 258
+I+ K+G + EA + QM+ + V+YNT+I+ CKE ++E
Sbjct: 342 LISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKG 401
Query: 259 ----------------------AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
A L EM+ +G D++T+ +LID LC G ++ A
Sbjct: 402 ILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEAL 461
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNL 352
L+ M G N+ YN ++D K+ +I A +F+ ME+ ++S TY++++ L
Sbjct: 462 NLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGL 521
Query: 353 CKAKRLPSASKLLLSCLKSGVR 374
CK++R+ AS+L+ + G+R
Sbjct: 522 CKSERVEEASQLMDQMIMEGLR 543
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 137/304 (45%), Gaps = 7/304 (2%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKH-GFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
+L+ L + + + +F K F P + ++ L KAG + ILKE+ S
Sbjct: 59 LLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKIS 118
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK-GYTFDGFGYCTVIAAFVKIGRLKE 224
+ + ++ Y L+ + AM+ + G + Y ++ V +LK
Sbjct: 119 LSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKL 178
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
MV+ G++ D+ ++N LI C+ ++ A LL++EME G D+ T T ++
Sbjct: 179 VEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQ 238
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 340
G + GN+ GA E M + G N +V+ K+G+I+ A+ E M ++
Sbjct: 239 GFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFF 298
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D +T++ +V+ L K + A +++ L+ G +++ GL G EA K+
Sbjct: 299 PDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKV 358
Query: 400 QSKI 403
+++
Sbjct: 359 LNQM 362
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ +C+ I+ M G PD+VTY +LIAG + + + LL + G
Sbjct: 552 LLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKG 611
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR-YTDNA 120
I +YN ++ LF+ + EA R+F++MI P T+ I+ GLC+ A
Sbjct: 612 INLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEA 671
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGL 146
+ + + G+VPE ++ +L +GL
Sbjct: 672 VDFVMEMLERGYVPEFSSFYMLAEGL 697
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 18/146 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ +A +L ++ GI+ YN +I R ++ L EM+E
Sbjct: 587 LIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKA 646
Query: 62 IPPDVWSYNSLMHCLFQLGKP-DEANRVFQDMICGDLTPCTATFNIMLNGLC-------- 112
PD +Y + L Q G P EA +M+ P ++F ++ GL
Sbjct: 647 EAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTL 706
Query: 113 ---------KNRYTDNALRMFRGLQK 129
K +++DN + M RG K
Sbjct: 707 IKLIDMVMEKAKFSDNEVTMIRGFLK 732
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 122/405 (30%), Positives = 198/405 (48%), Gaps = 11/405 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG--ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
+D C+ ++ +R+ +SPD VT+++LI G + + + + D+M+
Sbjct: 329 FLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIA 388
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G P+V +YN+L++ L + K + A+ + + M+ +TP T++++++ CK D
Sbjct: 389 GGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDE 448
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG-DSGHAPNAITYTTIM 178
AL + G+ G P +VT+N +I GLCK+ R A + ++ G P+ ITY T++
Sbjct: 449 ALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLI 508
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
FR + +L AM D + + I K+G + A +M+ +
Sbjct: 509 DGLFRTGRAGQAEALLDAMPDP----DTYAFNCCINGLSKLGDVSRALQVYNRMLELELV 564
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D V++N LI CK G E A L +EM + + D T LIDGLCKAG ++ AR
Sbjct: 565 PDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDI 624
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 354
L+ M +G N+ YN +V L K G+I+ A E M V DS TY S+V+ LC+
Sbjct: 625 LDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCR 684
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
A R A +L+ G +VDGL SG +A +
Sbjct: 685 ASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITV 729
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 209/414 (50%), Gaps = 14/414 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM-LE 59
+L+DA+C+ D +L+ M G +P+VVT+NS+I G ++ + + D+M L+
Sbjct: 435 VLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALK 494
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G+ PD +Y +L+ LF+ G+ +A + M P T FN +NGL K
Sbjct: 495 HGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP----DPDTYAFNCCINGLSKLGDVSR 550
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
AL+++ + + VP+ VT+NILI G CKAG A + +E+ P+ +T+ ++
Sbjct: 551 ALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALID 610
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + + +IL M G + Y ++ K GR++EA ++E+MV+ G
Sbjct: 611 GLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVP 670
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D ++Y +L+ C+ + + A L+ E++ G++ D T+ IL+DGL K+G + A L
Sbjct: 671 DSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVL 730
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-------VKDSFTYSSMVHNL 352
E M G ++ YN ++D L K G ++ A + M V + TYS +++ L
Sbjct: 731 EEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGL 790
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKS--AQKAVVDGLRHSGCRREAKKIQSKIR 404
CK R+ A +L+ ++ +L + + +DGL EA ++ +R
Sbjct: 791 CKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLR 844
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 122/407 (29%), Positives = 200/407 (49%), Gaps = 13/407 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ AG + + E G PDVVTYN+LI + L + L +M
Sbjct: 222 IINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRS 281
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYTDN 119
P+V +Y+ L++ L ++G+ DEA + Q+M D+ P T+N L+GLCK T
Sbjct: 282 CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAE 341
Query: 120 ALRMFRGLQKHGF--VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
A + R L+ P+ VT++ LI GLCK G++ A + ++ G+ PN ITY +
Sbjct: 342 ACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNAL 401
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + K + ++ +M KG T D Y ++ AF K R+ EA + + M + G
Sbjct: 402 VNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGC 461
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEME-KQGFECDKYTHTILIDGLCKAGNIKGAR 296
++V++N++I+ CK + A+ + D+M K G DK T+ LIDGL + G A
Sbjct: 462 TPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAE 521
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNL 352
L+ M D + A+NC ++ L K G + A+ V+ M V D T++ ++
Sbjct: 522 ALLDAMP----DPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGA 577
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
CKA AS L + ++ A++DGL +G A+ I
Sbjct: 578 CKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDI 624
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 206/407 (50%), Gaps = 11/407 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ +F+ + M + PDV+T+ +LI G + + + D+LD M +
Sbjct: 572 ILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL 631
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+PP+V +YN+L+H L + G+ +EA + ++M+ P + T+ ++ LC+ TD+A
Sbjct: 632 GVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDA 691
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L++ L+ G+ P+ VTYNIL+ GL K+G+ A +L+E+ GH P+ +TY T++
Sbjct: 692 LQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDS 751
Query: 181 CFRNRKYKLGLEI---LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG- 236
+ + + +S+ + + Y +I K+GR+ EA + +++M+
Sbjct: 752 LCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSC 811
Query: 237 -VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHTILIDGLCKAGNIK 293
V +I++YN+ ++ CK+ + A L+ + D T + LIDGLCK G
Sbjct: 812 DVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTD 871
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 349
A + M G+ N+ YN +++ L K K++ A + ESM K D TYS +V
Sbjct: 872 EACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLV 931
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
CKA + A +LL G +++DGL S EA
Sbjct: 932 DAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEA 978
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 193/408 (47%), Gaps = 54/408 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ D ++ + M G P+V+TYN+L+ G + + + +++ M++ G
Sbjct: 366 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 425
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +Y+ L+ + + DEA + M TP TFN +++GLCK+ + A
Sbjct: 426 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAF 485
Query: 122 RMFRGLQ-KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+MF + KHG VP+ +TY LI GL + GR A +L + P+ TY C
Sbjct: 486 QMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAM------PDPDTYA--FNC 537
Query: 181 CFRNRKYKLG-----LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
C N KLG L++ + M D + +IA K G ++A+ E+MV
Sbjct: 538 CI-NGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 596
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
+Q D++++ LI+ CK G++EAA +LD M G + T+ L+ GLCK+G I+ A
Sbjct: 597 NLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEA 656
Query: 296 RLHLEYM-----------------------------------NKIGFDSNLEAYNCIVDR 320
LE M G+D + YN +VD
Sbjct: 657 CQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDG 716
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
L K G+ + AI V E M K D TY++++ +LCKA L A +L
Sbjct: 717 LWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRL 764
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 187/360 (51%), Gaps = 11/360 (3%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
+A PD +N I G ++ +S +L + + MLE+ + PD ++N L+ + G +
Sbjct: 525 DAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFE 584
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+A+ +F++M+ +L P TF +++GLCK + A + + G P +VTYN L+
Sbjct: 585 QASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALV 644
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
GLCK+GR+ A L+E+ SG P++ITY +++ R + L+++S +K G+
Sbjct: 645 HGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWD 704
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y ++ K G+ ++A +E+MV G D+V+YNTLI+ CK G LE A L
Sbjct: 705 PDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRL 764
Query: 264 LDEMEKQGFEC---DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD--SNLEAYNCIV 318
+M + C + T+++LI+GLCK G I AR ++ M + D N+ YN +
Sbjct: 765 HGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFL 824
Query: 319 DRLGKDGKIDHAINVFESME------VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
D L K + A + S+ D+ T+S+++ LCK + A + + G
Sbjct: 825 DGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGG 884
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 165/354 (46%), Gaps = 44/354 (12%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
M G++P +VTYN++I G +++ L ++L +E++E G PDV
Sbjct: 206 EMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDV-------------- 251
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
T+N +++ LCK + A R+ + VP +VTY+
Sbjct: 252 ---------------------VTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYS 290
Query: 141 ILIKGLCKAGRLRTARWILKELGDSG--HAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
+LI GLCK GR+ AR +++E+ PN ITY + + + E++ +++
Sbjct: 291 VLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLR 350
Query: 199 RKG--YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
+ D + T+I K G++ EA + M+ G ++++YN L+N CK K
Sbjct: 351 DGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADK 410
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+E A+ +++ M +G D T+++L+D CKA + A L M G N+ +N
Sbjct: 411 MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNS 470
Query: 317 IVDRLGKDGKIDHAINVFESMEVK-----DSFTYSSMVHNLCKAKRLPSASKLL 365
I+D L K + A +F+ M +K D TY +++ L + R A LL
Sbjct: 471 IIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALL 524
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 156/327 (47%), Gaps = 33/327 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRM--REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
+LI+ C+ D ++ M + + P+++TYNS + G + S+++ + +L+ +
Sbjct: 785 VLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLR 844
Query: 59 E--MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
+ + + PD ++++L+ L + G+ DEA VF DMI G P T+N+++NGLCK
Sbjct: 845 DGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDK 904
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
+ A M + G P+++TY++L+ CKA + A +L + G PN +T+ +
Sbjct: 905 MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNS 964
Query: 177 IMKCCFRNRKYKLGLEILSAMKRK-GYTFDGFGYCTVIAAFVKIG--------------- 220
I+ ++ + ++ M K G D YCT+I + G
Sbjct: 965 IIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDP 1024
Query: 221 -------------RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
+L + + + +M+ + D V++N LI CK G E A L +EM
Sbjct: 1025 DTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEM 1084
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKG 294
+ + D T LIDGLCKAG ++
Sbjct: 1085 VAKNLQPDVMTFGALIDGLCKAGQVEA 1111
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 176/369 (47%), Gaps = 45/369 (12%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHCLFQLGKPDEAN 86
P+VVTY+ LI G + + + +L+ EM+ + P++ +YNS + L + EA
Sbjct: 778 PNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEAC 837
Query: 87 RVFQDMICGDL--TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
+ + + G L +P T TF+ +++GLCK TD A +F + G+VP +VTYN+L+
Sbjct: 838 ELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMN 897
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
GLCK ++ A +++ + D G P+ ITY+ ++ + LE+L M +G T
Sbjct: 898 GLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCT- 956
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
++V++N++I+ CK + A+ +
Sbjct: 957 ----------------------------------PNVVTFNSIIDGLCKSDQSGEAFQMF 982
Query: 265 DEME-KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
D+M K G DK T+ LIDGL + G A + L+ M D + A+NC ++ L K
Sbjct: 983 DDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMP----DPDTYAFNCCINGLSK 1038
Query: 324 DGKIDHAINVFESME-VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
G + A++ +E V D T++ ++ CKA AS L + ++ A
Sbjct: 1039 LGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGA 1098
Query: 383 VVDGLRHSG 391
++DGL +G
Sbjct: 1099 LIDGLCKAG 1107
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 164/374 (43%), Gaps = 43/374 (11%)
Query: 66 VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTP-------------------------- 99
++S+N ++ L + G P +A +F+ + P
Sbjct: 111 IFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFF 170
Query: 100 --------CTATFNIMLNGLCKNRYTDNALRMFRG-LQKHGFVPELVTYNILIKGLCKAG 150
A +NI+L LC+ T AL +FRG + + G P +VTYN +I GLCK+
Sbjct: 171 RRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSN 230
Query: 151 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
L + +EL + GH P+ +TY T++ + + + M + + Y
Sbjct: 231 ELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYS 290
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDG--VQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
+I K+GR+ EA + +++M V +I++YN+ ++ CK+ A L+ +
Sbjct: 291 VLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLR 350
Query: 269 KQGFEC--DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
D T + LIDGLCK G I A + M G+ N+ YN +V+ L K K
Sbjct: 351 DGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADK 410
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
++ A + ESM K D TYS +V CKA R+ A +LL G +
Sbjct: 411 MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNS 470
Query: 383 VVDGLRHSGCRREA 396
++DGL S EA
Sbjct: 471 IIDGLCKSDRSGEA 484
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 130/264 (49%), Gaps = 14/264 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ D + + M G P+VVTYN L+ G + + + +++ M++ G
Sbjct: 860 LIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKG 919
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +Y+ L+ + DEA + M TP TFN +++GLCK+ + A
Sbjct: 920 VTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAF 979
Query: 122 RMFRGLQ-KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+MF + KHG P+ +TY LI GL + G A +L + P+ TY C
Sbjct: 980 QMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAM------PDPDTYA--FNC 1031
Query: 181 CFRNRKYKLGLEILSAMKRK---GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
C N KLG ++ A+ R D + +IA K G ++A+ E+MV +
Sbjct: 1032 CI-NGLSKLG-DVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNL 1089
Query: 238 QLDIVSYNTLINLYCKEGKLEAAY 261
Q D++++ LI+ CK G++EA +
Sbjct: 1090 QPDVMTFGALIDGLCKAGQVEATW 1113
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 192/358 (53%), Gaps = 1/358 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ + + + + + G+ P VV++N+LI+G + + L M
Sbjct: 147 VLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESE 206
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PDV+++++L++ L + G+ DE + +F +M L P TF ++++G CK D A
Sbjct: 207 RVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLA 266
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L+ F+ + G P+LVTYN LI GLCK G L+ AR ++ E+ SG P+ IT+TT++
Sbjct: 267 LKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDG 326
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + + LEI M +G D + +I+ + GR+ +A + M++ G + D
Sbjct: 327 CCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPD 386
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y +++ +CK+G + + LL EM+ G T+ L++GLCK G +K A++ L+
Sbjct: 387 DPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLD 446
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDG-KIDHAINVFESMEVKDSFTYSSMVHNLCKAKR 357
M +G N YN +++ K G +D I E VKD +Y+++V+ K +
Sbjct: 447 AMLNVGVAPNDITYNILLEGHSKHGSSVDVDIFNSEKGLVKDYASYTALVNESSKTSK 504
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 160/322 (49%), Gaps = 4/322 (1%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
E+L+ G PP+ + +N LMH ++G A VF ++ L P +FN +++G CK
Sbjct: 132 EVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAG 191
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
+ R+ ++ P++ T++ LI GLCK GRL + E+ G PN +T+T
Sbjct: 192 AVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFT 251
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
++ + K L L+ M +G D Y +I K+G LKEA + +M
Sbjct: 252 VLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSAS 311
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G++ D +++ TLI+ CK G +E+A + M ++G E D T+LI GLC+ G + A
Sbjct: 312 GLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDA 371
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 351
L M GF + Y +VD K G + + + M+ V TY+++++
Sbjct: 372 ERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNG 431
Query: 352 LCKAKRLPSASKLLLSCLKSGV 373
LCK ++ +A LL + L GV
Sbjct: 432 LCKQGQVKNAKMLLDAMLNVGV 453
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 125/260 (48%), Gaps = 6/260 (2%)
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G+ P +N+L+ G CK G + +AR + E+ G P +++ T++ C + + G
Sbjct: 137 GYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEG 196
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+ M+ + D F + +I K GRL E + ++M G+ + V++ LI+
Sbjct: 197 FRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDG 256
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
CK GK++ A M QG D T+ LI+GLCK G++K AR + M+ G +
Sbjct: 257 QCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPD 316
Query: 311 LEAYNCIVDRLGKDGKIDHAIN-----VFESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 365
+ ++D K G ++ A+ V E +E+ D ++ ++ LC+ R+ A ++L
Sbjct: 317 RITFTTLIDGCCKYGDMESALEIKRRMVEEGIEL-DDVAFTVLISGLCRDGRVHDAERML 375
Query: 366 LSCLKSGVRILKSAQKAVVD 385
L +G + VVD
Sbjct: 376 RDMLSAGFKPDDPTYTMVVD 395
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 8/223 (3%)
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
R + LE+L + GY + F + ++ F K+G + A +++ G++ +VS+
Sbjct: 125 RSWAFYLEVLDS----GYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSF 180
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
NTLI+ CK G +E + L ME + D +T + LI+GLCK G + L + M
Sbjct: 181 NTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCG 240
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPS 360
G N + ++D K GK+D A+ F+ M + D TY+++++ LCK L
Sbjct: 241 KGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKE 300
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A +L+ SG+R + ++DG G A +I+ ++
Sbjct: 301 ARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRM 343
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
+LE ++ E+ G+ + + +L+ G CK G + ARL + + K G + ++N
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181
Query: 316 CIVDRLGKDGKIDHAI---NVFESMEV-KDSFTYSSMVHNLCKAKRLPSASKLL 365
++ K G ++ V ES V D FT+S++++ LCK RL S L
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLF 235
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 201/418 (48%), Gaps = 47/418 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC D G +L M G SP+ VT+ SL+ G S +S + LL +M+ M
Sbjct: 132 ILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRM 191
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD------LTPCTATFNIMLNGLCKN 114
G P+V +Y +L++ L G A ++ ++M+ G+ + P + +++ LCK+
Sbjct: 192 GYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKD 251
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D +F ++ G P++V Y+ +I G+C GR A+ + E+ D G PN +T+
Sbjct: 252 GLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTF 311
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
++ + K + +L M ++G + D F Y T+I F GR+ +A D M +
Sbjct: 312 NVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMES 371
Query: 235 DGVQLDIVSYNTLINLYCK-----------------------------------EGKLEA 259
G++ D VSYN LIN YCK EGK+
Sbjct: 372 KGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRD 431
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A+ L EM+ + T+ IL+DGLCK ++ A Y+ F +++ +NC++D
Sbjct: 432 AWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLID 491
Query: 320 RLGKDGKIDHAINVF-----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
L K KI+ A +F E +E + TY+ M+H LCK+ +L +A L L + G
Sbjct: 492 GLCKARKIEIARELFNRLSHEGLE-PNVITYTVMIHGLCKSGQLENAKDLFLGMEEKG 548
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 173/340 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID+ C+ D G + M+ GISPDVV Y+S+I G + L +EM++ G
Sbjct: 244 IIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEG 303
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V ++N L+ L + GK +EAN + + MI +P T T+N +++G C D+A
Sbjct: 304 VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDAR 363
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ G + V+YN+LI G CK+GR+ A+ + +E+ P ITY T++
Sbjct: 364 DLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGL 423
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
FR K + + MK T + Y ++ K L EA + + Q I
Sbjct: 424 FREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSI 483
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+N LI+ CK K+E A L + + +G E + T+T++I GLCK+G ++ A+
Sbjct: 484 QIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLG 543
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 341
M + G NL +N ++ ++ ++ + + + M KD
Sbjct: 544 MEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKD 583
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 173/361 (47%), Gaps = 10/361 (2%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
+++ N + + +P + ++N+L+ + + L M +G+ PD + N L++
Sbjct: 76 AFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILIN 135
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
C L K D V +M+ +P T TF ++ GLC A + R + + G+ P
Sbjct: 136 CYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRP 195
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKEL--GDSGHA----PNAITYTTIMKCCFRNRKYK 188
+VTY L+ GLC G A + +E+ G+ G PN + Y TI+ ++
Sbjct: 196 NVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLID 255
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
G E+ MK +G + D Y ++I GR + A +MV +GV ++V++N LI
Sbjct: 256 KGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLI 315
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
+ CK GK+E A LL M ++G D +T+ LIDG C G I AR M G +
Sbjct: 316 DALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIE 375
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKL 364
++ +YN +++ K G++ A ++ M K+ TY++++ L + ++ A L
Sbjct: 376 TDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNL 435
Query: 365 L 365
Sbjct: 436 F 436
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 138/287 (48%), Gaps = 35/287 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C D + M GI D V+YN LI G ++ + + L EM+
Sbjct: 349 LIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKE 408
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P V +YN+L+ LF+ GK +A +F +M DLTP + T+NI+L+GLCKN + A+
Sbjct: 409 IMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAM 468
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F L+ H F P + +N LI GLCKA ++ AR + L G PN ITYT +
Sbjct: 469 ELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVM---- 524
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
I K G+L+ A D M G ++
Sbjct: 525 -------------------------------IHGLCKSGQLENAKDLFLGMEEKGCAPNL 553
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
V++NTL+ +C+ +++ LL EM ++ F D T +I++D L K
Sbjct: 554 VTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSK 600
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 185/372 (49%), Gaps = 10/372 (2%)
Query: 48 SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 107
S + + + +++M P + S+N+L+ + ++ + + +++ M L P T NI+
Sbjct: 74 SEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNIL 133
Query: 108 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 167
+N C D L + + + G P VT+ L+KGLC R+ A +L+++ G+
Sbjct: 134 INCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGY 193
Query: 168 APNAITYTTIMK--CCFRNR--KYKLGLEILSAMKRKGYTFDG--FGYCTVIAAFVKIGR 221
PN +TY T++ C N KL E+L+ G T YCT+I + K G
Sbjct: 194 RPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGL 253
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
+ + + +M G+ D+V+Y+++I+ C G+ E A L +EM +G + T +
Sbjct: 254 IDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNV 313
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 340
LID LCKAG ++ A L+ M + G + YN ++D +G+ID A ++F SME K
Sbjct: 314 LIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKG 373
Query: 341 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
D+ +Y+ +++ CK+ R+ A KL + + ++ GL G R+A
Sbjct: 374 IETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAW 433
Query: 398 KIQSKIRMAKIS 409
+ ++++ ++
Sbjct: 434 NLFGEMKVHDLT 445
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 102/193 (52%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
+ + M+ ++P+ TYN L+ G +N+ LS +++L + P + +N L+
Sbjct: 432 AWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLID 491
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
L + K + A +F + L P T+ +M++GLCK+ +NA +F G+++ G P
Sbjct: 492 GLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAP 551
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
LVT+N L++G C+ ++ +L+E+ + +P+A T + ++ ++ KY+ L +L
Sbjct: 552 NLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLL 611
Query: 195 SAMKRKGYTFDGF 207
+G T G+
Sbjct: 612 PTFPAQGQTGRGY 624
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 72/168 (42%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ + + + P + +N LI G + + + +L + +
Sbjct: 453 ILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHE 512
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V +Y ++H L + G+ + A +F M P TFN ++ G C+N
Sbjct: 513 GLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKV 572
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
+ + + + + F P+ T +I++ L K + R +L G
Sbjct: 573 VELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQGQT 620
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 194/371 (52%), Gaps = 5/371 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ +L M+ G SPDV+TY L+ G + S ++ + ++L EML+
Sbjct: 118 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 177
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P++ +YNSL+H L + + +A + +DM C TP T+ +++GLCK +A
Sbjct: 178 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 237
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
M + G P+L+ YN+LI GLCKA ++ + +L+ G P+ +TY++++
Sbjct: 238 CAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYG 297
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R+ + +L +K +G D Y T+I K G++ EA D E M DG D
Sbjct: 298 LCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDAD 357
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+Y+TLI+ CK G+++ A+LLL M + G T+ LI GLC ++ A +E
Sbjct: 358 VVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVE 417
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDH-AINVFESM----EVKDSFTYSSMVHNLCKA 355
M + + YN ++ + + ++D A++ F+ M + D TYS ++ L K+
Sbjct: 418 EMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKS 477
Query: 356 KRLPSASKLLL 366
K L L+L
Sbjct: 478 KDLHELRHLVL 488
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 119/390 (30%), Positives = 201/390 (51%), Gaps = 6/390 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ D + M+ SP +VTYN+L+ G R L ++ L EML+
Sbjct: 16 LIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRR 75
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
DV S+N L+ L + GK + A F+ M +P T++++++GLCK A+
Sbjct: 76 -SHDVISFNILVTGLCRAGKIETALEFFRKMD-DRCSPNVITYSVLIDGLCKANRVSQAV 133
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++ G P+++TY IL+ GLCK ++ A +L+E+ D+G PN +TY +++
Sbjct: 134 ELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGL 193
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R R+ L ++ M +G T + Y T+I K+GR+K+A + M+ G D+
Sbjct: 194 CRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDL 253
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ YN LIN CK +++ + LL G + D T++ +I GLC++ + A L Y
Sbjct: 254 MIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLY 313
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G ++ Y+ ++D L K GK+D A +++E M D TYS+++ LCKA R
Sbjct: 314 VKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGR 373
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ A LL ++ G +++ GL
Sbjct: 374 VDEAHLLLARMVRMGTPPSTMTYNSLIKGL 403
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 188/366 (51%), Gaps = 5/366 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C+ + +M + SP+V+TY+ LI G + + +S +++LL+ M
Sbjct: 84 ILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDGLCKANRVSQAVELLESMKAR 142
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +Y L+ L + K A V ++M+ P T+N +L+GLC+ R +A
Sbjct: 143 GCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDA 202
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + R + G P +VTY LI GLCK GR++ A +L ++ D G P+ + Y ++
Sbjct: 203 LALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLING 262
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + +L G D Y +VI + RL EA + + + G D
Sbjct: 263 LCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPD 322
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++ Y+TLI+ CK GK++ A+ L + M G + D T++ LIDGLCKAG + A L L
Sbjct: 323 VILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLA 382
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M ++G + YN ++ L +D AI + E ME + TY+ ++H +C+ +
Sbjct: 383 RMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRME 442
Query: 357 RLPSAS 362
R+ SA+
Sbjct: 443 RVDSAA 448
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 215/446 (48%), Gaps = 44/446 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ + C D ++ M G++ + +TY++L+ G + L ++ L++ M E
Sbjct: 79 VVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAER 138
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P V +YNS++ + + DEA+ + M+ P T+ ++ G CK+R
Sbjct: 139 GCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRG 198
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + + GF P++VTY+ +I GLCKAGRLR A I +E+ AP AITY +++
Sbjct: 199 LELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGG 255
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + +L M D Y T+++AF K+GRL +A + +QMV + + D
Sbjct: 256 YCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPD 315
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V++ +L++ C EG++E A LL+E+ ++G YT+ ++DG CKA ++ A +
Sbjct: 316 VVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVA 375
Query: 301 YMNKIGFDSNLEAYNCIV-------------------------------------DRLGK 323
GF N YN +V D L +
Sbjct: 376 DFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCR 435
Query: 324 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
DG+ D A+ +E M V + T++++V LCKA + A +LL +K G
Sbjct: 436 DGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGT 495
Query: 380 QKAVVDGLRHSGCRREAKKIQSKIRM 405
AVV +G ++A ++ S++R+
Sbjct: 496 CDAVVSAYCRAGMIQKADELASELRL 521
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 177/374 (47%), Gaps = 36/374 (9%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
PD +TY L+ G ++ L ++ +L EM+ PD + ++ L + D+A
Sbjct: 36 PPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARE 95
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
+ ++M+ + T++ +++GLCK D A+ + + + G P +VTYN +I G C
Sbjct: 96 LVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFC 155
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
+A R+ A ++++ G P+ ITYT ++ ++R GLE+L + R+G+T D
Sbjct: 156 RARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIV 215
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQ--------------------------------MVTD 235
Y TVI K GRL++A D E+ MV D
Sbjct: 216 TYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDD 275
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
D+V+Y TL++ +CK G+L+ AY L +M D T T L+DGLC G ++ A
Sbjct: 276 KCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDA 335
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 351
LE + + G + YNC+VD K ++ A + V ++ TY+ +V
Sbjct: 336 LELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAG 395
Query: 352 LCKAKRLPSASKLL 365
C+A R A + L
Sbjct: 396 CCRAGRTDQALQYL 409
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 201/398 (50%), Gaps = 5/398 (1%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL-DEMLEMGIPPDVWSY 69
S + +L M G++P+V TYN L+ +L ++ D+M G P+V +Y
Sbjct: 134 SLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTY 193
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N+L+ + G+ D A R+ M G + P TFN ++NGLCK ++A +MF + +
Sbjct: 194 NTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAR 253
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G P+ V+YN L+ G CKAG L A + E+ G P+ +T+T+++ R +
Sbjct: 254 EGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLER 313
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+ ++ M+ +G + F + +I F + G L +A M++M +Q +V YN LIN
Sbjct: 314 AVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLIN 373
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
YCK G+++ A L+ EME +G + D T++ ++ G CK G+ A M K G
Sbjct: 374 GYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVP 433
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 365
+ Y+ ++ L ++ ++ A +FE M D FTY++++ CK + A L
Sbjct: 434 DAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLH 493
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+K GV ++DGL S +EA+++ K+
Sbjct: 494 DEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKL 531
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 211/456 (46%), Gaps = 54/456 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A+C+ DA ++ MRE G+ P +VT+N+++ G + + + + DEM G
Sbjct: 196 LVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREG 255
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTP------------CTA------- 102
+ PD SYN+L+ + G EA VF +M + P C A
Sbjct: 256 LTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAV 315
Query: 103 ----------------TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
TF +++G C+N + D+AL + +++ P +V YN+LI G
Sbjct: 316 ALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGY 375
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK GR+ AR ++ E+ G P+ +TY+TI+ + E+ M +KG D
Sbjct: 376 CKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDA 435
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y ++I + RL +A + E+M+ G+Q D +Y TLI+ +CKEG ++ A L DE
Sbjct: 436 ITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDE 495
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGAR---LHLEYMNKIGFDSNLEA---------Y 314
M K+G D T+++LIDGL K+ K A+ L Y + + + EA +
Sbjct: 496 MIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEF 555
Query: 315 NCIVDRL---GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLS 367
+V L G ++ A V++SM + D YS ++H C+ + A
Sbjct: 556 KSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQ 615
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L+ G ++ ++V GL G EA + ++
Sbjct: 616 LLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQEL 651
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 146/290 (50%), Gaps = 20/290 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ D +++ M G+ PDVVTY+++++G + + +L +ML+
Sbjct: 370 VLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKK 429
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD +Y+SL+ L + + +A +F+ M+ L P T+ +++G CK A
Sbjct: 430 GVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKA 489
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + K G +P++VTY++LI GL K+ R + A+ +L +L P+ I Y +M C
Sbjct: 490 LSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHC 549
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C R ++K + +L KG++ G + +A + M+ +LD
Sbjct: 550 C-RTAEFKSVVALL-----KGFSMKGL--------------MNQADKVYQSMLDRHWKLD 589
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
Y+ LI+ +C+ G + A ++ + GF + + L+ GL + G
Sbjct: 590 GSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEG 639
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 124/248 (50%), Gaps = 6/248 (2%)
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
G+AP+ + Y ++ + +L++M R G + + Y ++ A G+ +EA
Sbjct: 115 GYAPSLLAYNAVL-LALSDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 226 TDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
+ + M G ++V+YNTL+ +C+ G+++AA L+ M + G T +++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VK 340
GLCKAG ++ AR + M + G + +YN +V K G + A+ VF M V
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 400
D T++S++H +C+A L A L+ + G+R+ + A++DG +G +A
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAM 353
Query: 401 SKIRMAKI 408
++R +I
Sbjct: 354 KEMRECRI 361
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 205/406 (50%), Gaps = 8/406 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + + M + G+ P V+TYN++I G ++ ++ +L + + M + G
Sbjct: 294 LISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNG 353
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD W+YN+L++ L K +EA + + + TP TF ++NG C D+AL
Sbjct: 354 CHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDAL 412
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
RM + +L + LI L K RL+ A+ +L E+ +G PN ITYT+I+
Sbjct: 413 RMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGY 472
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ K + LE+L M+R G + + Y +++ VK +L +A + +M DG+ ++
Sbjct: 473 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 532
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y TL+ C E + A+ L + ME+ G + D++ + +L D LCKAG + A +
Sbjct: 533 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSF 589
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ + G Y ++D K G D A + E M DS+TYS ++H LCK KR
Sbjct: 590 IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKR 649
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L A +L G++ A ++D + G AK++ +++
Sbjct: 650 LNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEM 695
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 175/401 (43%), Gaps = 54/401 (13%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+LN + G+ P+V+TY S+I G ++ + +L++L M G P+ W+YNSLM+ L
Sbjct: 449 LLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLV 508
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ K +A + M + P T+ +L G C DNA R+F ++++G P+
Sbjct: 509 KDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEH 568
Query: 138 TYNILIKGLCKAGRLRTA--------------------------------RWILKELGDS 165
Y +L LCKAGR A +++ + D
Sbjct: 569 AYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDE 628
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
G P++ TY+ ++ + ++ L IL M +G F Y +I ++ G+ A
Sbjct: 629 GCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHA 688
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+M + G + +Y IN YCKEG+LE A L+ +ME++G D T+ ILIDG
Sbjct: 689 KRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDG 748
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG----------------KIDH 329
G I A L+ M + N Y ++ L K ++D
Sbjct: 749 CGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDI 808
Query: 330 AINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLL 365
+ E M VK TYSS++ CKA RL A LL
Sbjct: 809 TWQLLERM-VKHGLNPTVTTYSSLIAGFCKAGRLEEACLLL 848
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 195/430 (45%), Gaps = 45/430 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +YC+ + + E G+ P+ T N+L+ G R L + L M MG
Sbjct: 189 MIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMG 248
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ +SY L+ L + EA +F M +P F +++GLCK+ +A
Sbjct: 249 CQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 308
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT-IMKC 180
+F + ++G VP ++TYN +I G K GR+ A I + + +G P+ TY T I
Sbjct: 309 LLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGL 368
Query: 181 CFRNRKYKLGLEILSAMKRKGY-----TFDGF--GYC----------------------- 210
C ++K + E+L+ ++G+ TF GYC
Sbjct: 369 C--DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLD 426
Query: 211 -----TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+I + +K RLKEA + + ++ +G+ ++++Y ++I+ YCK GK++ A +L
Sbjct: 427 LQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLK 486
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
ME+ G + + +T+ L+ GL K + A L M K G N+ Y ++ +
Sbjct: 487 MMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEH 546
Query: 326 KIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
D+A +FE ME D Y+ + LCKA R A + ++ GV + K
Sbjct: 547 DFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYT 603
Query: 382 AVVDGLRHSG 391
++DG +G
Sbjct: 604 TLIDGFSKAG 613
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 163/353 (46%), Gaps = 16/353 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID + + + D T++ RM + G +PD TY+ L+ + L+ +L +LD+M G
Sbjct: 605 LIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRG 664
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I +++Y L+ + + GK D A R++ +M P T+ + +N CK ++A
Sbjct: 665 IKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAE 724
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ +++ G P++VTYNILI G G + A LK + + PN TY ++K
Sbjct: 725 DLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHL 784
Query: 182 FRNR----------------KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
+ + + ++L M + G Y ++IA F K GRL+EA
Sbjct: 785 LKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEA 844
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
++ M G+ + Y LI C E A + M + GF+ ++ +L+ G
Sbjct: 845 CLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVG 904
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
LC G+ + + + ++G++ + A+ + D L K G +D + ME
Sbjct: 905 LCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIME 957
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 174/403 (43%), Gaps = 41/403 (10%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
VS DA I R A ++ YN + R + + ++++ G+ PD +Y
Sbjct: 128 VSADAIQAI-RRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTY 186
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N+++ + G A+R F+ ++ G L P T T N ++ G C+ A +F +
Sbjct: 187 NTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPL 246
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G +Y ILI+GLC+A +R A + + G +PN +T ++ ++ +
Sbjct: 247 MGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGD 306
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+ AM + G Y +I + K+GR+ +A E M +G D +YNTLI
Sbjct: 307 ARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIY 366
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA------------RL 297
C + K E A LL+ K+GF T T LI+G C A A +L
Sbjct: 367 GLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKL 425
Query: 298 HLEYMNKI-----------------------GFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
L+ K+ G N+ Y I+D K GK+D A+ V
Sbjct: 426 DLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL 485
Query: 335 ESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ ME +++TY+S+++ L K K+L A LL K G+
Sbjct: 486 KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGI 528
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 146/327 (44%), Gaps = 5/327 (1%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
YN + L + + RV+ ++ L P T T+N M+ CK A R FR L
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLL 210
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
+ G PE T N L+ G C+ G LR A W+ + G N +YT +++ + +
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVR 270
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
L + MKR G + + + +I+ K GR+ +A + M +GV +++YN +I
Sbjct: 271 EALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
Y K G++ A + + MEK G D +T+ LI GLC + L L K GF
Sbjct: 331 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEEL-LNNAVKEGFT 389
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
+ + +++ K D A+ + M D + ++++L K RL A +L
Sbjct: 390 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 449
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSG 391
L +G+ +++DG SG
Sbjct: 450 LNEISANGLVPNVITYTSIIDGYCKSG 476
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 104/233 (44%), Gaps = 9/233 (3%)
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM----EQ 231
+++ C ++ + + A++R G A + R + T+YM Q
Sbjct: 115 SMLNCSDTAEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARF-DMTEYMGRVYSQ 173
Query: 232 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
+V DG+ D V+YNT+I YCKEG L A+ + + G E + +T L+ G C+ G
Sbjct: 174 LVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGE 233
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSS 347
++ A M +G N +Y ++ L + + A+ +F M+ + ++
Sbjct: 234 LRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTF 293
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 400
++ LCK+ R+ A L + ++GV A++ G G +A KI+
Sbjct: 294 LISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIK 346
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 188/358 (52%), Gaps = 4/358 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ CQ D +L M + G PDV TY+++I N L + ++++M++ G
Sbjct: 307 FVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSG 366
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD ++N+L+ L + +EA + +++ L+P TFNI++N LCK A+
Sbjct: 367 CLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAV 426
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+F ++ G P+ VTYNILI LC +G+L A +LKE+ SG + +TY TI+
Sbjct: 427 RLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGL 486
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R+ + E+ M G + + T+I R+ +A + ++QM+++G+Q +
Sbjct: 487 CKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNN 546
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN+++ YCK+G + A +L M GFE D T+ LI+GLCKA + A L
Sbjct: 547 VTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRG 606
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EV---KDSFTYSSMVHNLCKA 355
M G +AYN ++ L + A+++F M EV D+FTY + LC+
Sbjct: 607 MRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRG 664
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 187/367 (50%), Gaps = 7/367 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
++ YT M GI PDVVT+N++I R ++ +L+EM + PD ++ +
Sbjct: 180 LESAYT---EMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTT 236
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM + G + A R+ M +P + T N+++NG CK +AL + G
Sbjct: 237 LMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADG 296
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
F P+ VT++ + GLC+ G + A +L + G P+ TY+T++ C N + +
Sbjct: 297 FEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAK 356
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
I++ M G D + T+I A +L+EA D ++ G+ ++ ++N LIN
Sbjct: 357 GIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINAL 416
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
CK G A L +EM+ G D+ T+ ILID LC +G + A L+ M G +
Sbjct: 417 CKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQST 476
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLS 367
YN I+D L K +I+ A VF+ M+V +++ T+++++ LC A+R+ A++L+
Sbjct: 477 VTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQ 536
Query: 368 CLKSGVR 374
+ G++
Sbjct: 537 MISEGLQ 543
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 194/434 (44%), Gaps = 39/434 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+IDA C+ +L M ++PD T+ +L+ G + +L L M EMG
Sbjct: 202 VIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMG 261
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + N L++ +LG+ +A Q I P TF+ +NGLC+N + D+AL
Sbjct: 262 CSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHAL 321
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT-IMKC 180
++ + + G P++ TY+ +I LC G L A+ I+ ++ DSG P+ T+ T I+
Sbjct: 322 KVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVAL 381
Query: 181 CFRNRKYK----------------------------------LGLEILSAMKRKGYTFDG 206
C N+ + L + + MK G T D
Sbjct: 382 CTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDE 441
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I G+L +A D +++M G V+YNT+I+ CK ++E A + D+
Sbjct: 442 VTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQ 501
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+ G + T LIDGLC A I A ++ M G N YN I+ K G
Sbjct: 502 MDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGN 561
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
I A ++ ++M D TY+++++ LCKA+R +A KLL G++ A
Sbjct: 562 ISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNP 621
Query: 383 VVDGLRHSGCRREA 396
V+ L R+A
Sbjct: 622 VIQSLFRGNNGRDA 635
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 191/392 (48%), Gaps = 7/392 (1%)
Query: 2 LIDAYCQFVSFDAGYTIL-NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
I +Y + FD + ++ N++ G+ + YN L+ S + EM
Sbjct: 131 FIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQ 190
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PDV ++N+++ L + + A + ++M D+ P TF ++ G + + A
Sbjct: 191 GIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAA 250
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHAPNAITYTTIMK 179
LR+ + + G P VT N+LI G CK GR+ A +I +E+ D G P+ +T++T +
Sbjct: 251 LRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIAD-GFEPDRVTFSTFVN 309
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+N L++L M ++G D + Y TVI G L+EA + QMV G
Sbjct: 310 GLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLP 369
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D ++NTLI C E +LE A L E+ +G + YT ILI+ LCK G+ A
Sbjct: 370 DTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLF 429
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKA 355
E M G + YN ++D L GK+ A+++ + MEV + + TY++++ LCK
Sbjct: 430 EEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKR 489
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+R+ A ++ +G+ ++DGL
Sbjct: 490 RRIEEAEEVFDQMDVTGIGRNAITFNTLIDGL 521
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 179/383 (46%), Gaps = 36/383 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C + I+N+M ++G PD T+N+LI + L +LDL E+ G
Sbjct: 342 VINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKG 401
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V+++N L++ L ++G P A R+F++M TP T+NI+++ LC + AL
Sbjct: 402 LSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKAL 461
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + ++ G VTYN +I GLCK R+ A + ++ +G NAIT+ T++
Sbjct: 462 DLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGL 521
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ E++ M +G + Y +++ + K G + +A D ++ M +G ++D+
Sbjct: 522 CNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDV 581
Query: 242 VSYNTLINLYCKEGKLEAAYLLL-----------------------------------DE 266
V+Y TLIN CK + +AA LL E
Sbjct: 582 VTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFRE 641
Query: 267 MEKQGFECDKYTHTILIDGLCKAGN-IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M + G D +T+ I+ GLC+ G IK A L M GF ++ + + L G
Sbjct: 642 MTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLG 701
Query: 326 KIDHAINVFESMEVKDSFTYSSM 348
D+ I E + K +F S +
Sbjct: 702 MDDYLIRAIELIVEKANFRESDI 724
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 136/291 (46%), Gaps = 1/291 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+A C+ + M+ +G +PD VTYN LI + L+ +LDLL EM
Sbjct: 411 ILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVS 470
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +YN+++ L + + +EA VF M + TFN +++GLC D+A
Sbjct: 471 GCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDA 530
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P VTYN ++ CK G + A IL+ + +G + +TY T++
Sbjct: 531 AELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLING 590
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ R+ + L++L M+ KG Y VI + + ++A +M G D
Sbjct: 591 LCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPD 650
Query: 241 IVSYNTLINLYCK-EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+Y + C+ G ++ A+ L EM GF + + +L +GL G
Sbjct: 651 AFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLG 701
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 205/406 (50%), Gaps = 8/406 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + + M + G+ P V+TYN++I G ++ ++ +L + + M + G
Sbjct: 294 LISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNG 353
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD W+YN+L++ L K +EA + + + TP TF ++NG C D+AL
Sbjct: 354 CHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDAL 412
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
RM + +L + LI L K RL+ A+ +L E+ +G PN ITYT+I+
Sbjct: 413 RMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGY 472
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ K + LE+L M+R G + + Y +++ VK +L +A + +M DG+ ++
Sbjct: 473 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 532
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y TL+ C E + A+ L + ME+ G + D++ + +L D LCKAG + A +
Sbjct: 533 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSF 589
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ + G Y ++D K G D A + E M DS+TYS ++H LCK KR
Sbjct: 590 IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKR 649
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L A +L G++ A ++D + G AK++ +++
Sbjct: 650 LNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEM 695
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 175/401 (43%), Gaps = 54/401 (13%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+LN + G+ P+V+TY S+I G ++ + +L++L M G P+ W+YNSLM+ L
Sbjct: 449 LLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLV 508
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ K +A + M + P T+ +L G C DNA R+F ++++G P+
Sbjct: 509 KDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEH 568
Query: 138 TYNILIKGLCKAGRLRTA--------------------------------RWILKELGDS 165
Y +L LCKAGR A +++ + D
Sbjct: 569 AYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDE 628
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
G P++ TY+ ++ + ++ L IL M +G F Y +I ++ G+ A
Sbjct: 629 GCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHA 688
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+M + G + +Y IN YCKEG+LE A L+ +ME++G D T+ ILIDG
Sbjct: 689 KRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDG 748
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG----------------KIDH 329
G I A L+ M + N Y ++ L K ++D
Sbjct: 749 CGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDI 808
Query: 330 AINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLL 365
+ E M VK TYSS++ CKA RL A LL
Sbjct: 809 TWQLLERM-VKHGLNPTVTTYSSLIAGFCKAGRLEEACLLL 848
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 194/430 (45%), Gaps = 45/430 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +YC+ + + E G+ P+ T N+L+ G R L + L M MG
Sbjct: 189 MIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMG 248
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ +SY L+ L +A +F M +P F +++GLCK+ +A
Sbjct: 249 CQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 308
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT-IMKC 180
+F + ++G VP ++TYN +I G K GR+ A I + + +G P+ TY T I
Sbjct: 309 LLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGL 368
Query: 181 CFRNRKYKLGLEILSAMKRKGY-----TFDGF--GYC----------------------- 210
C ++K + E+L+ ++G+ TF GYC
Sbjct: 369 C--DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLD 426
Query: 211 -----TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+I + +K RLKEA + + ++ +G+ ++++Y ++I+ YCK GK++ A +L
Sbjct: 427 LQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLK 486
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
ME+ G + + +T+ L+ GL K + A L M K G N+ Y ++ +
Sbjct: 487 MMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEH 546
Query: 326 KIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
D+A +FE ME D Y+ + LCKA R A + ++ GV + K
Sbjct: 547 DFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYT 603
Query: 382 AVVDGLRHSG 391
++DG +G
Sbjct: 604 TLIDGFSKAG 613
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 163/353 (46%), Gaps = 16/353 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID + + + D T++ RM + G +PD TY+ L+ + L+ +L +LD+M G
Sbjct: 605 LIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRG 664
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I +++Y L+ + + GK D A R++ +M P T+ + +N CK ++A
Sbjct: 665 IKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAE 724
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ +++ G P++VTYNILI G G + A LK + + PN TY ++K
Sbjct: 725 DLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHL 784
Query: 182 FRNR----------------KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
+ + + ++L M + G Y ++IA F K GRL+EA
Sbjct: 785 LKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEA 844
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
++ M G+ + Y LI C E A + M + GF+ ++ +L+ G
Sbjct: 845 CLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVG 904
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
LC G+ + + + ++G++ + A+ + D L K G +D + ME
Sbjct: 905 LCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIME 957
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 173/403 (42%), Gaps = 41/403 (10%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
VS DA I R A ++ YN + R + + ++++ G+ PD +Y
Sbjct: 128 VSADAIQAI-RRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTY 186
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N+++ + G A+R F+ ++ G L P T T N ++ G C+ A +F +
Sbjct: 187 NTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPL 246
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G +Y ILI+GLC A +R A + + G +PN +T ++ ++ +
Sbjct: 247 MGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGD 306
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+ AM + G Y +I + K+GR+ +A E M +G D +YNTLI
Sbjct: 307 ARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIY 366
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA------------RL 297
C + K E A LL+ K+GF T T LI+G C A A +L
Sbjct: 367 GLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKL 425
Query: 298 HLEYMNKI-----------------------GFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
L+ K+ G N+ Y I+D K GK+D A+ V
Sbjct: 426 DLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL 485
Query: 335 ESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ ME +++TY+S+++ L K K+L A LL K G+
Sbjct: 486 KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGI 528
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 146/327 (44%), Gaps = 5/327 (1%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
YN + L + + RV+ ++ L P T T+N M+ CK A R FR L
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 210
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
+ G PE T N L+ G C+ G LR A W+ + G N +YT +++ + +
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVR 270
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
L + MKR G + + + +I+ K GR+ +A + M +GV +++YN +I
Sbjct: 271 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
Y K G++ A + + MEK G D +T+ LI GLC + L L K GF
Sbjct: 331 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEEL-LNNAVKEGFT 389
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
+ + +++ K D A+ + M D + ++++L K RL A +L
Sbjct: 390 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 449
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSG 391
L +G+ +++DG SG
Sbjct: 450 LNEISANGLVPNVITYTSIIDGYCKSG 476
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 9/233 (3%)
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM----EQ 231
+++ C ++ + + A++R G A + R + T+YM Q
Sbjct: 115 SMLNCSDTAEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARF-DMTEYMGRVYSQ 173
Query: 232 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
+V DG+ D V+YNT+I YCKEG L A+ + + G E + +T L+ G C+ G
Sbjct: 174 LVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGE 233
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSS 347
++ A M +G N +Y ++ L + A+ +F M+ + ++
Sbjct: 234 LRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTF 293
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 400
++ LCK+ R+ A L + ++GV A++ G G +A KI+
Sbjct: 294 LISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIK 346
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 200/406 (49%), Gaps = 4/406 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++AY F +R+ + + L + +L S + +E+L+
Sbjct: 160 VLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDC 219
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PPDV +N LMH L + K +EA +F ++ L P +FN ++NG CK+ D
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+ R + ++ P++ TY++LI GLCK G+L A + E+ D G PN +T+TT++
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ LG+EI M RKG D Y T+I K+G L+EA + +M G++ D
Sbjct: 340 HCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPD 399
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y LI+ CKEG LE+A + EM K+G E D T LI G C+ G + A L
Sbjct: 400 KFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLR 459
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + G + Y ++ K G + + + M+ V TY+ +++ LCK
Sbjct: 460 EMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQG 519
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 402
++ +A+ LL + L GV +++G G R + K+QS+
Sbjct: 520 QMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKLQSE 565
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 194/361 (53%), Gaps = 4/361 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C+ + + + + G+ P VV++N+LI G ++ L L M+E
Sbjct: 230 VLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMEN 289
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PDV++Y+ L++ L + G+ D+AN++F +M L P TF ++NG C D
Sbjct: 290 RVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLG 349
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + + G P+++TYN LI GLCK G LR A+ ++ E+ G P+ TYT ++
Sbjct: 350 MEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDG 409
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + + LEI M ++G D + +I+ F + G++ EA + +M+ G++ D
Sbjct: 410 CCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPD 469
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y +I+ +CK+G ++ + LL EM+ G T+ +L++GLCK G +K A + L+
Sbjct: 470 DATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLD 529
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDG-KIDHAINVFESMEVKDSFTYSSMVHNL---CKAK 356
M +G + YN +++ K G + D E V+D +Y+S++ +L CK +
Sbjct: 530 AMLNLGVVPDDITYNILLEGHCKHGNREDFDKLQSEKGLVQDYGSYTSLIGDLRKTCKER 589
Query: 357 R 357
+
Sbjct: 590 Q 590
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 136/309 (44%), Gaps = 4/309 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F++++N + Y +A++ FR ++KH + L L K A +E+
Sbjct: 158 FSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEIL 217
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
D G+ P+ + +M + K + + ++G + T+I + K G L
Sbjct: 218 DCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLD 277
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
+ M+ + V D+ +Y+ LIN CKEG+L+ A L EM +G + T T LI
Sbjct: 278 QGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLI 337
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
+G C G + M + G ++ YN +++ L K G + A + M +
Sbjct: 338 NGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLK 397
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D FTY+ ++ CK L SA ++ +K G+ + A A++ G G EA++
Sbjct: 398 PDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERT 457
Query: 400 QSKIRMAKI 408
++ A I
Sbjct: 458 LREMLEAGI 466
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 4/183 (2%)
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
S ++ +G + ++ A+ G +A + +Q+ S L + K
Sbjct: 144 SVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKL 203
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
A+ +E+ G+ D +L+ LCK I A+L + K G + ++
Sbjct: 204 NLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSF 263
Query: 315 NCIVDRLGKDGKIDHAINV----FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
N +++ K G +D + E+ D FTYS +++ LCK +L A+KL L
Sbjct: 264 NTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCD 323
Query: 371 SGV 373
G+
Sbjct: 324 RGL 326
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 211/443 (47%), Gaps = 39/443 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ +L +M + G P++VT +SL+ G + +S ++ L+D+M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ ++N+L+H LF K EA + M+ P T+ +++NGLCK TD A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ P ++ YN +I GLCK + A + KE+ G PN +TY++++ C
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL- 239
++ +LS M + D F + +I AFVK G+L EA ++MV +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 240 ----------------------------------DIVSYNTLINLYCKEGKLEAAYLLLD 265
D+V+YNTLI +CK ++E +
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM ++G + T+ ILI GL +AG+ A+ + M G N+ YN ++D L K+G
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 326 KIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
K++ A+ VFE ++ +TY+ M+ +CKA ++ L + GV+ A
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Query: 382 AVVDGLRHSGCRREAKKIQSKIR 404
++ G G + EA + +++
Sbjct: 541 TMISGFCRKGSKEEADALFKEMK 563
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 189/356 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++ C+ D + +LN+M + + P V+ YN++I G + + +L+L EM
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+V +Y+SL+ CL G+ +A+R+ DMI + P TF+ +++ K A
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + K P +VTY+ LI G C RL A+ + + + P+ +TY T++K
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ + G+E+ M ++G + Y +I + G A + ++MV+DGV +
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++YNTL++ CK GKLE A ++ + +++ E YT+ I+I+G+CKAG ++
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAK 356
++ G ++ AYN ++ + G + A +F+ M+ + S + L +A+
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 581
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 168/337 (49%), Gaps = 2/337 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C++ D + M GI P+VVTY+SLI+ S + LL +M+E
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV+++++L+ + GK EA +++ +M+ + P T++ ++NG C + D A
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 122 RMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+MF + KH F P++VTYN LIKG CK R+ + +E+ G N +TY +++
Sbjct: 382 QMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+ + EI M G + Y T++ K G+L++A E + ++
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I +YN +I CK GK+E + L + +G + D + +I G C+ G+ + A +
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M + G N YN ++ +DG + + + + M
Sbjct: 561 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 168/330 (50%), Gaps = 1/330 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + + +L+ M E I+PDV T+++LI + L + L DEM++
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P + +Y+SL++ + DEA ++F+ M+ P T+N ++ G CK + + +
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + + G V VTYNILI+GL +AG A+ I KE+ G PN +TY T++
Sbjct: 417 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N K + + + ++R + Y +I K G++++ D + GV+ D+
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNT+I+ +C++G E A L EM++ G + + LI + G+ + + ++
Sbjct: 537 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 596
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
M GF + + + L DG++D +
Sbjct: 597 MRSCGFAGDASTIGLVTNML-HDGRLDKSF 625
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 176/386 (45%), Gaps = 4/386 (1%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
+ D + M ++ P ++ ++ L++ + + + L ++M +GIP + ++Y
Sbjct: 60 LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY 119
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
+ L++C + + A V M+ P T + +LNG C ++ A+ + +
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G+ P VT+N LI GL + A ++ + G P+ +TY ++ + L
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+L+ M++ Y T+I K + +A + ++M T G++ ++V+Y++LI+
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
C G+ A LL +M ++ D +T + LID K G + A + M K D
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
++ Y+ +++ ++D A +FE M K D TY++++ CK KR+ ++
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSG 391
+ G+ ++ GL +G
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAG 445
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 146/299 (48%), Gaps = 5/299 (1%)
Query: 109 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
NGL + + D+A+ +F + K P ++ ++ L+ + K + + +++ + G
Sbjct: 55 NGLSELKL-DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
N TY+ ++ C R + L L +L M + GY + +++ + R+ EA
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
++QM G Q + V++NTLI+ K A L+D M +G + D T+ ++++GLCK
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 344
G+ A L M + + + YN I+D L K +D A+N+F+ ME K + T
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
YSS++ LC R AS+LL ++ + A++D G EA+K+ ++
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 148/323 (45%), Gaps = 4/323 (1%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K D+A +F +M+ P F+ +L+ + K D + + +Q G TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
ILI C+ +L A +L ++ G+ PN +T ++++ +++ + ++ M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
GY + + T+I + EA +++MV G Q D+V+Y ++N CK G + A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
+ LL++ME+ E + +IDGLCK ++ A + M G N+ Y+ ++
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
L G+ A + M + D FT+S+++ K +L A KL +K +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 377 KSAQKAVVDGLRHSGCRREAKKI 399
++++G EAK++
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQM 383
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 94/195 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI Q D I M G+ P+++TYN+L+ G +N L ++ + + +
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P +++YN ++ + + GK ++ +F ++ + P +N M++G C+ + A
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ +++ G +P YN LI+ + G + ++KE+ G A +A T +
Sbjct: 556 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 615
Query: 181 CFRNRKYKLGLEILS 195
R K L++LS
Sbjct: 616 LHDGRLDKSFLDMLS 630
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 205/406 (50%), Gaps = 8/406 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + + M + G+ P V+TYN++I G ++ ++ +L + + M + G
Sbjct: 179 LISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNG 238
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD W+YN+L++ L K +EA + + + TP TF ++NG C D+AL
Sbjct: 239 CHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDAL 297
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
RM + +L + LI L K RL+ A+ +L E+ +G PN ITYT+I+
Sbjct: 298 RMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGY 357
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ K + LE+L M+R G + + Y +++ VK +L +A + +M DG+ ++
Sbjct: 358 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 417
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y TL+ C E + A+ L + ME+ G + D++ + +L D LCKAG + A +
Sbjct: 418 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSF 474
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ + G Y ++D K G D A + E M DS+TYS ++H LCK KR
Sbjct: 475 IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKR 534
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L A +L G++ A ++D + G AK++ +++
Sbjct: 535 LNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEM 580
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 175/401 (43%), Gaps = 54/401 (13%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+LN + G+ P+V+TY S+I G ++ + +L++L M G P+ W+YNSLM+ L
Sbjct: 334 LLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLV 393
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ K +A + M + P T+ +L G C DNA R+F ++++G P+
Sbjct: 394 KDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEH 453
Query: 138 TYNILIKGLCKAGRLRTA--------------------------------RWILKELGDS 165
Y +L LCKAGR A +++ + D
Sbjct: 454 AYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDE 513
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
G P++ TY+ ++ + ++ L IL M +G F Y +I ++ G+ A
Sbjct: 514 GCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHA 573
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+M + G + +Y IN YCKEG+LE A L+ +ME++G D T+ ILIDG
Sbjct: 574 KRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDG 633
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG----------------KIDH 329
G I A L+ M + N Y ++ L K ++D
Sbjct: 634 CGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDI 693
Query: 330 AINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLL 365
+ E M VK TYSS++ CKA RL A LL
Sbjct: 694 TWQLLERM-VKHGLNPTVTTYSSLIAGFCKAGRLEEACLLL 733
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 194/430 (45%), Gaps = 45/430 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +YC+ + + E G+ P+ T N+L+ G R L + L M MG
Sbjct: 74 MIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMG 133
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ +SY L+ L +A +F M +P F +++GLCK+ +A
Sbjct: 134 CQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 193
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT-IMKC 180
+F + ++G VP ++TYN +I G K GR+ A I + + +G P+ TY T I
Sbjct: 194 LLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGL 253
Query: 181 CFRNRKYKLGLEILSAMKRKGY-----TFDGF--GYC----------------------- 210
C ++K + E+L+ ++G+ TF GYC
Sbjct: 254 C--DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLD 311
Query: 211 -----TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+I + +K RLKEA + + ++ +G+ ++++Y ++I+ YCK GK++ A +L
Sbjct: 312 LQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLK 371
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
ME+ G + + +T+ L+ GL K + A L M K G N+ Y ++ +
Sbjct: 372 MMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEH 431
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
D+A +FE ME D Y+ + LCKA R A + ++ GV + K
Sbjct: 432 DFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYT 488
Query: 382 AVVDGLRHSG 391
++DG +G
Sbjct: 489 TLIDGFSKAG 498
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 163/353 (46%), Gaps = 16/353 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID + + + D T++ RM + G +PD TY+ L+ + L+ +L +LD+M G
Sbjct: 490 LIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRG 549
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I +++Y L+ + + GK D A R++ +M P T+ + +N CK ++A
Sbjct: 550 IKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAE 609
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ +++ G P++VTYNILI G G + A LK + + PN TY ++K
Sbjct: 610 DLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHL 669
Query: 182 FRNR----------------KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
+ + + ++L M + G Y ++IA F K GRL+EA
Sbjct: 670 LKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEA 729
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
++ M G+ + Y LI C E A + M + GF+ ++ +L+ G
Sbjct: 730 CLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVG 789
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
LC G+ + + + ++G++ + A+ + D L K G +D + ME
Sbjct: 790 LCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIME 842
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 173/403 (42%), Gaps = 41/403 (10%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
VS DA I R A ++ YN + R + + ++++ G+ PD +Y
Sbjct: 13 VSADAIQAI-RRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTY 71
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N+++ + G A+R F+ ++ G L P T T N ++ G C+ A +F +
Sbjct: 72 NTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPL 131
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G +Y ILI+GLC A +R A + + G +PN +T ++ ++ +
Sbjct: 132 MGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGD 191
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+ AM + G Y +I + K+GR+ +A E M +G D +YNTLI
Sbjct: 192 ARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIY 251
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA------------RL 297
C + K E A LL+ K+GF T T LI+G C A A +L
Sbjct: 252 GLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKL 310
Query: 298 HLEYMNKI-----------------------GFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
L+ K+ G N+ Y I+D K GK+D A+ V
Sbjct: 311 DLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL 370
Query: 335 ESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ ME +++TY+S+++ L K K+L A LL K G+
Sbjct: 371 KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGI 413
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 146/327 (44%), Gaps = 5/327 (1%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
YN + L + + RV+ ++ L P T T+N M+ CK A R FR L
Sbjct: 36 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 95
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
+ G PE T N L+ G C+ G LR A W+ + G N +YT +++ + +
Sbjct: 96 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVR 155
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
L + MKR G + + + +I+ K GR+ +A + M +GV +++YN +I
Sbjct: 156 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 215
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
Y K G++ A + + MEK G D +T+ LI GLC + L L K GF
Sbjct: 216 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEEL-LNNAVKEGFT 274
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
+ + +++ K D A+ + M D + ++++L K RL A +L
Sbjct: 275 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 334
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSG 391
L +G+ +++DG SG
Sbjct: 335 LNEISANGLVPNVITYTSIIDGYCKSG 361
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 8/186 (4%)
Query: 224 EATDYM----EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
+ T+YM Q+V DG+ D V+YNT+I YCKEG L A+ + + G E + +T
Sbjct: 47 DMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTC 106
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME- 338
L+ G C+ G ++ A M +G N +Y ++ L + A+ +F M+
Sbjct: 107 NALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKR 166
Query: 339 ---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
+ ++ ++ LCK+ R+ A L + ++GV A++ G G +
Sbjct: 167 DGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMND 226
Query: 396 AKKIQS 401
A KI+
Sbjct: 227 ALKIKE 232
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 211/443 (47%), Gaps = 39/443 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ +L +M + G P++VT +SL+ G + +S ++ L+D+M
Sbjct: 735 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 794
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ ++N+L+H LF K EA + M+ P T+ +++NGLCK TD A
Sbjct: 795 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 854
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ P ++ YN +I GLCK + A + KE+ G PN +TY++++ C
Sbjct: 855 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 914
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL- 239
++ +LS M + D F + +I AFVK G+L EA ++MV +
Sbjct: 915 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 974
Query: 240 ----------------------------------DIVSYNTLINLYCKEGKLEAAYLLLD 265
D+V+YNTLI +CK ++E +
Sbjct: 975 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 1034
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM ++G + T+ ILI GL +AG+ A+ + M G N+ YN ++D L K+G
Sbjct: 1035 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 1094
Query: 326 KIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
K++ A+ VFE ++ +TY+ M+ +CKA ++ L + GV+ A
Sbjct: 1095 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 1154
Query: 382 AVVDGLRHSGCRREAKKIQSKIR 404
++ G G + EA + +++
Sbjct: 1155 TMISGFCRKGSKEEADALFKEMK 1177
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 189/356 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++ C+ D + +LN+M + + P V+ YN++I G + + +L+L EM
Sbjct: 840 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 899
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+V +Y+SL+ CL G+ +A+R+ DMI + P TF+ +++ K A
Sbjct: 900 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 959
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + K P +VTY+ LI G C RL A+ + + + P+ +TY T++K
Sbjct: 960 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 1019
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ + G+E+ M ++G + Y +I + G A + ++MV+DGV +
Sbjct: 1020 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 1079
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++YNTL++ CK GKLE A ++ + +++ E YT+ I+I+G+CKAG ++
Sbjct: 1080 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 1139
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAK 356
++ G ++ AYN ++ + G + A +F+ M+ + S + L +A+
Sbjct: 1140 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 1195
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 193/408 (47%), Gaps = 39/408 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ +C +IL +M + G PD VT SL+ G R + +S ++ L+D+M+E+
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN++ ++ LCK + ++A
Sbjct: 288 GYKPDIVAYNAI-----------------------------------IDSLCKTKRVNDA 312
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
F+ +++ G P +VTY L+ GLC + R A +L ++ PN ITY+ ++
Sbjct: 313 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 372
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+N K E+ M R D Y ++I R+ EA + MV+ G D
Sbjct: 373 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 432
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+VSYNTLIN +CK ++E L EM ++G + T+ LI G +AG++ A+
Sbjct: 433 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 492
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M+ G ++ YN ++ L +G+++ A+ +FE M+ + D TY++++ +CK
Sbjct: 493 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 552
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++ A L S G++ ++ GL G E + + +K++
Sbjct: 553 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 600
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 168/337 (49%), Gaps = 2/337 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C++ D + M GI P+VVTY+SLI+ S + LL +M+E
Sbjct: 876 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 935
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV+++++L+ + GK EA +++ +M+ + P T++ ++NG C + D A
Sbjct: 936 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 995
Query: 122 RMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+MF + KH F P++VTYN LIKG CK R+ + +E+ G N +TY +++
Sbjct: 996 QMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 1054
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+ + EI M G + Y T++ K G+L++A E + ++
Sbjct: 1055 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 1114
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I +YN +I CK GK+E + L + +G + D + +I G C+ G+ + A +
Sbjct: 1115 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 1174
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M + G N YN ++ +DG + + + + M
Sbjct: 1175 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 1211
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 168/329 (51%), Gaps = 1/329 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + + +L+ M E I+PDV T+++LI + L + L DEM++
Sbjct: 911 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 970
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P + +Y+SL++ + DEA ++F+ M+ P T+N ++ G CK + + +
Sbjct: 971 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 1030
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + + G V VTYNILI+GL +AG A+ I KE+ G PN +TY T++
Sbjct: 1031 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 1090
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N K + + + ++R + Y +I K G++++ D + GV+ D+
Sbjct: 1091 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 1150
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNT+I+ +C++G E A L EM++ G + + LI + G+ + + ++
Sbjct: 1151 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 1210
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
M GF + + + L DG++D +
Sbjct: 1211 MRSCGFAGDASTIGLVTNML-HDGRLDKS 1238
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/455 (23%), Positives = 192/455 (42%), Gaps = 56/455 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C + I M++ + D+VTY ++I G + + + L +
Sbjct: 508 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 567
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--------C----GDLTPCTATFNIML 108
G+ PD+ +Y ++M L G E ++ M C GD+T ML
Sbjct: 568 GLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKML 627
Query: 109 N-------------GLCKNRYT---------------------------DNALRMFRGLQ 128
+ G+CK + D+A+ +F +
Sbjct: 628 SCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMV 687
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
K P ++ ++ L+ + K + + +++ + G N TY+ ++ C R +
Sbjct: 688 KSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLP 747
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
L L +L M + GY + +++ + R+ EA ++QM G Q + V++NTLI
Sbjct: 748 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 807
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
+ K A L+D M +G + D T+ ++++GLCK G+ A L M + +
Sbjct: 808 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 867
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
+ YN I+D L K +D A+N+F+ ME K + TYSS++ LC R AS+L
Sbjct: 868 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 927
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L ++ + A++D G EA+K+
Sbjct: 928 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 962
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 160/333 (48%), Gaps = 4/333 (1%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K ++A +F DM+ P FN +L+ + K + D + + + ++ G +L T+N
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
I+I C ++ A IL ++ G+ P+ +T +++ R + + ++ M
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
GY D Y +I + K R+ +A D+ +++ G++ ++V+Y L+N C + A
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
LL +M K+ + T++ L+D K G + A+ E M ++ D ++ Y+ +++
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 407
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
L +ID A +F+ M K D +Y+++++ CKAKR+ KL + G+
Sbjct: 408 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 467
Query: 377 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
++ G +G +A++ S++ IS
Sbjct: 468 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 500
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 94/195 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI Q D I M G+ P+++TYN+L+ G +N L ++ + + +
Sbjct: 1050 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 1109
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P +++YN ++ + + GK ++ +F ++ + P +N M++G C+ + A
Sbjct: 1110 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 1169
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ +++ G +P YN LI+ + G + ++KE+ G A +A T +
Sbjct: 1170 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 1229
Query: 181 CFRNRKYKLGLEILS 195
R K L++LS
Sbjct: 1230 LHDGRLDKSFLDMLS 1244
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 193/368 (52%), Gaps = 4/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ A + +M EAG P+VVTYN LI ++ L++ +LD+ M
Sbjct: 206 IINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKR 265
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+++YNSL+ L + EA+ + +M ++ P TFN++++ +CK A
Sbjct: 266 ISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQ 325
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ + + G P++VTY+ L+ G + AR + + G P+A +Y ++K
Sbjct: 326 GVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGY 385
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ ++ + M +G T D Y T+I ++GRL+EA D + M ++G D+
Sbjct: 386 CKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDL 445
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y+ L++ +CKEG L A+ L M+ + D + ILID +CK GN+K AR
Sbjct: 446 FTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSE 505
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G N++ Y I++ L K+G +D A+ F +ME D F+Y+ ++ + K
Sbjct: 506 LFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKD 565
Query: 358 LPSASKLL 365
A++L+
Sbjct: 566 ESRAAQLI 573
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 190/400 (47%), Gaps = 4/400 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID + D +++ ++M + G+ PD VT+N+LI G + + +++ D+
Sbjct: 135 ILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEAS 194
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P V++Y ++++ L ++G+ A +F+ M P T+NI+++ LCK++ + A
Sbjct: 195 GCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEA 254
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F ++ P++ TYN LI+GLC R + A +L E+ PN T+ ++
Sbjct: 255 LDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDA 314
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + M G D Y +++ + + EA + M+T G + D
Sbjct: 315 ICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPD 374
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
SYN LI YCK +++ A L +EM QG D + LI GLC+ G ++ A+ +
Sbjct: 375 AFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFK 434
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
M+ G +L Y+ ++D K+G + A +F M+ D Y+ ++ +CK
Sbjct: 435 NMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFG 494
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
L A KL G+ +++ L G EA
Sbjct: 495 NLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEA 534
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 199/396 (50%), Gaps = 4/396 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
+ A ++ +M AG+SPD+ T + LI + + + + +M+++G+ PD ++N+
Sbjct: 111 YGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNT 170
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
L++ L ++GK +A F D P T+ ++NGLCK T A +F+ +++ G
Sbjct: 171 LINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAG 230
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
P +VTYNILI LCK + A I + +P+ TY ++++ R++K
Sbjct: 231 CQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEAS 290
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+L+ M + F + ++ A K G++ EA + M GV+ D+V+Y++L+ Y
Sbjct: 291 ALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGY 350
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
++ A L D M +G + D +++ ILI G CKA I A+ M G +
Sbjct: 351 SLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDN 410
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
YN ++ L + G++ A ++F++M + D FTYS ++ CK L A +L
Sbjct: 411 VNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRV 470
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ ++ + ++D + G ++A+K+ S++
Sbjct: 471 MQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSEL 506
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 146/306 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C F + +LN M I P++ T+N L+ + +S + + M EMG
Sbjct: 276 LIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMG 335
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +Y+SLM+ + EA ++F MI P ++NI++ G CK + D A
Sbjct: 336 VEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAK 395
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + G P+ V YN LI GLC+ GRLR A+ + K + +G+ P+ TY+ ++
Sbjct: 396 QLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGF 455
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + M+ D Y +I A K G LK+A ++ G+ ++
Sbjct: 456 CKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNV 515
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
Y T+IN CKEG L+ A ME G D++++ ++I G + + A +
Sbjct: 516 QIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGE 575
Query: 302 MNKIGF 307
M GF
Sbjct: 576 MRDRGF 581
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 135/280 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+DA C+ + M E G+ PDVVTY+SL+ G + + + L D M+
Sbjct: 310 VLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITK 369
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD +SYN L+ + + DEA ++F +MI LTP +N +++GLC+ A
Sbjct: 370 GCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREA 429
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ + +G +P+L TY++L+ G CK G L A + + + + P+ Y ++
Sbjct: 430 QDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDA 489
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K ++ S + +G + Y T+I K G L EA + M DG D
Sbjct: 490 MCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPD 549
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
SYN +I + + A L+ EM +GF + T T
Sbjct: 550 EFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGTTT 589
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 151/357 (42%), Gaps = 40/357 (11%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCK-NRYTDNALRMFRGLQKHGFVPELVTYNI 141
D+A F M+ + PC F +L+ + K +Y + + + ++ G P++ T +I
Sbjct: 76 DDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSI 135
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
LI R+ A + ++ G P+A+T+ T++ + K+ +E + G
Sbjct: 136 LIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASG 195
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ Y T+I KIG A ++M G Q ++V+YN LI+ CK+ + A
Sbjct: 196 CQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEAL 255
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+ M+ + D +T+ LI GLC K A L M + N+ +N +VD +
Sbjct: 256 DIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAI 315
Query: 322 GKDGKIDHAINVFES-----------------------MEV----------------KDS 342
K+GK+ A VF++ ME+ D+
Sbjct: 316 CKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDA 375
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
F+Y+ ++ CKAKR+ A +L + G+ ++ GL G REA+ +
Sbjct: 376 FSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDL 432
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 5/174 (2%)
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLD-EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
I+ + L++ K G+ A + L +ME G D YT +ILID + A
Sbjct: 94 IIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVF 153
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
M K+G + +N +++ L K GK A+ F+ E +TY+++++ LCK
Sbjct: 154 SKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKI 213
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+A+ L ++G + ++D L EA I S ++ +IS
Sbjct: 214 GETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRIS 267
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 208/408 (50%), Gaps = 9/408 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ A C D+ ++L M + G P+ V Y +LI ++ + ++ +L LL+EM M
Sbjct: 216 VVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLM 275
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD ++N ++ L + + +EA ++ M+ TP T+ ++NGLCK D A
Sbjct: 276 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAA 335
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS-GHAPNAITYTTIMK 179
+F + K P V +N LI G GRL A+ +L ++ S G P+ TY +++
Sbjct: 336 KDLFYRIPK----PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 391
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
++ L LE+L M+ KG + + Y ++ F K+G++ EA + + +M DG++
Sbjct: 392 GYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKP 451
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ V +N LI+ +CKE ++ A + EM ++G + D YT LI GLC+ IK A L
Sbjct: 452 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 511
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
M G +N YN +++ + G+I A + M + D TY+S++ LC+A
Sbjct: 512 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRA 571
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ A L L+ G+ + +++GL SG EA + Q ++
Sbjct: 572 GEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEM 619
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 181/362 (50%), Gaps = 5/362 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREA-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
LI + D +L+ M + GI PDV TYNSLI G + L+ +L++L +M
Sbjct: 353 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNK 412
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V+SY L+ +LGK DEA + +M L P T FN +++ CK A
Sbjct: 413 GCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 472
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +FR + + G P++ T+N LI GLC+ ++ A W+L+++ G N +TY T++
Sbjct: 473 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 532
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + K ++++ M +G D Y ++I + G + +A E+M+ DG+
Sbjct: 533 FLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPS 592
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+S N LIN C+ G +E A EM +G D T LI+GLC+AG I+
Sbjct: 593 SISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFR 652
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKI-DHAINVFESME---VKDSFTYSSMVHNLCKAK 356
+ G + YN ++ L K G + D + + E +E V + T+S ++ +L +
Sbjct: 653 KLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQE 712
Query: 357 RL 358
L
Sbjct: 713 TL 714
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 178/387 (45%), Gaps = 40/387 (10%)
Query: 57 MLEM----GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 112
MLEM P SYN ++ L A VF DM+ + P TF +++ LC
Sbjct: 163 MLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALC 222
Query: 113 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
D+AL + R + KHG VP V Y LI L K R+ A +L+E+ G P+A
Sbjct: 223 AVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE 282
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG--FGYC-------------------- 210
T+ ++ + + ++++ M +G+T D +GY
Sbjct: 283 TFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRI 342
Query: 211 ---------TVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAA 260
T+I FV GRL +A + MVT G+ D+ +YN+LI Y K+G + A
Sbjct: 343 PKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLA 402
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
+L +M +G + + Y++TIL+DG CK G I A L M+ G N +NC++
Sbjct: 403 LEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISA 462
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
K+ +I A+ +F M K D +T++S++ LC+ + A LL + GV
Sbjct: 463 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 522
Query: 377 KSAQKAVVDGLRHSGCRREAKKIQSKI 403
+++ G +EA+K+ +++
Sbjct: 523 TVTYNTLINAFLRRGEIKEARKLVNEM 549
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 150/286 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D +C+ D Y +LN M G+ P+ V +N LI+ + + ++++ EM
Sbjct: 423 ILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 482
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV+++NSL+ L ++ + A + +DMI + T T+N ++N + A
Sbjct: 483 GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 542
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G + + +TYN LIKGLC+AG + AR + +++ G P++I+ ++
Sbjct: 543 RKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILING 602
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R+ + +E M +G T D + ++I + GR+++ ++ +G+ D
Sbjct: 603 LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPD 662
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
V+YNTL++ CK G + A LLLDE + GF + T +IL+ L
Sbjct: 663 TVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSL 708
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 108/264 (40%), Gaps = 1/264 (0%)
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL-RTARWILKE 161
+ +++ L N R+ ++ G V + + +++ KAG +T R +L+
Sbjct: 107 VYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 166
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
P +Y +++ +K+ + M + F + V+ A +
Sbjct: 167 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNE 226
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
+ A + M G + V Y TLI+ K ++ A LL+EM G D T
Sbjct: 227 VDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 286
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 341
+I GLCK I A + M GF + Y +++ L K G++D A ++F +
Sbjct: 287 VILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPT 346
Query: 342 SFTYSSMVHNLCKAKRLPSASKLL 365
S +++++H RL A +L
Sbjct: 347 SVIFNTLIHGFVTHGRLDDAKAVL 370
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ + M G +PD+VT+NSLI G R + L + ++
Sbjct: 598 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 657
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
GIPPD +YN+LM L + G +A + + I P T++I+L L D
Sbjct: 658 GIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLD 715
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 204/409 (49%), Gaps = 1/409 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C + + N + + PD+V YNSL+ G R L+ +L +++EM+E G
Sbjct: 356 LINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEG 415
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+W+YN +++ L ++G +A V D I P TFN +++G CK D+AL
Sbjct: 416 CHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSAL 475
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + +G P+++TYN ++ GLCKAG+ + +E+ G PNAITY +++
Sbjct: 476 QLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENF 535
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + ++ M + G D + T+I F + G L A +++ G
Sbjct: 536 CKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATA 595
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++N LI Y + ++ A + EM +G++ D YT+ IL+DGLCKA N+ A HL
Sbjct: 596 DTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAE 655
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSA 361
M GF ++ + +++ L + ++ A+ + M V+ + L K+ +A
Sbjct: 656 MISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIM-VRMGVVPEVVDTILSTDKKEIAA 714
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
K+L+ L I A + + +G+R + R+A+K + I H
Sbjct: 715 PKILVEELMKKGHISYRAYEVLHEGVRDNKLTRKARKADASIMFVSQHH 763
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 180/375 (48%), Gaps = 4/375 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ L RM G PD TYN++I G ++ +L + +LL + + G
Sbjct: 286 LMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKG 345
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +Y SL++ L G + A +F + DL P +N ++ GLC+ +AL
Sbjct: 346 FVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHAL 405
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + + G P++ TYNI+I GLCK G + A ++ + G+ P+ T+ T++
Sbjct: 406 QVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGY 465
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K L+++ M G D Y +V+ K G+ KE + E+M+ G + +
Sbjct: 466 CKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNA 525
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN LI +CK +LE A ++ M + G D + LI G C+ G++ GA L +
Sbjct: 526 ITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQK 585
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
+++ G+ + + +N ++ + A +F M K D +TY +V LCKA
Sbjct: 586 LDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAAN 645
Query: 358 LPSASKLLLSCLKSG 372
+ A L + G
Sbjct: 646 VDRAYAHLAEMISKG 660
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 194/401 (48%), Gaps = 5/401 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++DA D + + RM AG++PD T+ + +L LL + E G
Sbjct: 112 IMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERG 171
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+Y +++ L+ G A +F +M+ D+ P ATFN +L+ LC+ +
Sbjct: 172 CDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESG 231
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K G T NI I+GLC+ GRL A +++ +G + AP+ +TY T+M+
Sbjct: 232 ALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMG-AYVAPDVVTYNTLMRGL 290
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ K + + L M +G D F Y T+I + K G L+EAT+ ++ V G D
Sbjct: 291 CKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDR 350
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y +LIN C EG +E A L +E + + + D + L+ GLC+ G I A +
Sbjct: 351 VTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNE 410
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M + G ++ YN I++ L K G I A V VK D FT+++++ CK +
Sbjct: 411 MVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLK 470
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
L SA +L+ G+ +V++GL +G +E +
Sbjct: 471 LDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNE 511
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 185/380 (48%), Gaps = 12/380 (3%)
Query: 5 AYCQFV----SFDAGYT---ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 57
AYC V + GY + + M + PDV T+N+++ + + S LL ++
Sbjct: 178 AYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKV 237
Query: 58 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
L+ G+ + ++ N + L + G+ +EA + + M + P T+N ++ GLCK+
Sbjct: 238 LKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERM-GAYVAPDVVTYNTLMRGLCKDSKV 296
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
A + + G +P+ TYN +I G CK+G L+ A +LK+ G P+ +TY ++
Sbjct: 297 QEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSL 356
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + LE+ + + K D Y +++ + G + A M +MV +G
Sbjct: 357 INGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGC 416
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
DI +YN +IN CK G + A +++++ +G+ D +T LIDG CK + A
Sbjct: 417 HPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQ 476
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 353
+E M G ++ YN +++ L K GK FE M +K ++ TY+ ++ N C
Sbjct: 477 LVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFC 536
Query: 354 KAKRLPSASKLLLSCLKSGV 373
K +L AS +++ + G+
Sbjct: 537 KINQLEEASGVIVRMCQDGL 556
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 167/365 (45%), Gaps = 40/365 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ I C+ + ++ RM A ++PDVVTYN+L+ G ++S + + L M+
Sbjct: 251 IWIRGLCEDGRLEEAVALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQ 309
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD ++YN+++ + G EA + +D + P T+ ++NGLC + A
Sbjct: 310 GCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERA 369
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F Q P+LV YN L+KGLC+ G + A
Sbjct: 370 LELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHA------------------------- 404
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
L++++ M +G D + Y +I K+G + +A M + G D
Sbjct: 405 ----------LQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPD 454
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ ++NTLI+ YCK KL++A L++ M G D T+ +++GLCKAG K E
Sbjct: 455 VFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFE 514
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
M G N YN +++ K +++ A V M V D+ ++++++H C+
Sbjct: 515 EMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNG 574
Query: 357 RLPSA 361
L A
Sbjct: 575 DLDGA 579
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 144/304 (47%), Gaps = 12/304 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ + ++N G PDV T+N+LI G + L +L L++ M
Sbjct: 425 IIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTY 484
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PDV +YNS+++ L + GK E N F++MI P T+NI++ CK + A
Sbjct: 485 GIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEA 544
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + G VP+ V++N LI G C+ G L A + ++L + G++ A T+ ++
Sbjct: 545 SGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGA 604
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ +I M KGY D + Y ++ K + A ++ +M++ G
Sbjct: 605 YSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPS 664
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG---------FECDK---YTHTILIDGLCK 288
+ ++ ++NL ++ A ++ M + G DK IL++ L K
Sbjct: 665 MATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVVDTILSTDKKEIAAPKILVEELMK 724
Query: 289 AGNI 292
G+I
Sbjct: 725 KGHI 728
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 127/277 (45%), Gaps = 7/277 (2%)
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+ F + P YN ++ L A A + + +G AP+A T+T +K
Sbjct: 90 AVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLK 149
Query: 180 C-CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
C R + + L +L ++ +G YCTV+ G A ++M+ V
Sbjct: 150 SFCLTGRPH-VALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVF 208
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D+ ++N +++ C++G + + LL ++ K+G +K+T I I GLC+ G ++ A
Sbjct: 209 PDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVAL 268
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 354
+E M ++ YN ++ L KD K+ A M + D FTY++++ CK
Sbjct: 269 VERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCK 327
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ L A++LL + G + ++++GL G
Sbjct: 328 SGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEG 364
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 192/356 (53%), Gaps = 1/356 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ S I N +R+ G+ P V++N+LI G ++ L L M E
Sbjct: 228 ILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEEN 287
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PDV++Y+ L+H L + G+ D A ++F +M L P TF +++G ++R D+A
Sbjct: 288 RIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSA 347
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + G P+LV YN L+ GLCK G + AR ++ E+ G P+ ITYTT++
Sbjct: 348 MNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDG 407
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + +EI M +G D + +I+ F + GR+++A + +MV G++ D
Sbjct: 408 YCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPD 467
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y +I+ YCK+G ++ + LL EM+ G + T+ +L++GLCK G +K A + LE
Sbjct: 468 DATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLE 527
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF-ESMEVKDSFTYSSMVHNLCKA 355
M +G + YN +++ K+GK + + + E + D Y+S+V K+
Sbjct: 528 AMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKGLIVDYAYYTSLVSEYNKS 583
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 169/322 (52%), Gaps = 4/322 (1%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
E+LE G PP V YN L++ + G +A +F ++ L P T +FN ++NGLCK+R
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSR 272
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D R+ + ++++ P++ TY++LI GLCK GRL A + E+ G PN IT+T
Sbjct: 273 NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFT 332
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
++ +R+R+ + M G D Y T++ K+G + +A +++M
Sbjct: 333 ALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMV 392
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G++ D ++Y TLI+ YCKEG LE+A + M ++G D T LI G C+ G ++ A
Sbjct: 393 GMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDA 452
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHN 351
L M + G + Y ++D K G + + + M++ TY+ +++
Sbjct: 453 ERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNG 512
Query: 352 LCKAKRLPSASKLLLSCLKSGV 373
LCK ++ +A+ LL + L GV
Sbjct: 513 LCKQGQMKNANMLLEAMLNLGV 534
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 97/184 (52%), Gaps = 6/184 (3%)
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
+ +++ G + YN LIN +CKEG + A L+ +E+ K+G + LI+GLC
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269
Query: 288 KAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
K+ N+ +G RL + M + ++ Y+ ++ L K+G++D A +F+ M+ + +
Sbjct: 270 KSRNLDEGFRLK-KTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNG 328
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 402
T+++++ +++R+ SA L GV+ +++GL G +A+K+ +
Sbjct: 329 ITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDE 388
Query: 403 IRMA 406
++M
Sbjct: 389 MKMV 392
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
+ E+ + GF + ILI+ CK G+I+ A+L + K G ++N +++
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLING 267
Query: 321 LGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
L K +D + ++ME D FTYS ++H LCK RL A +L + G+R
Sbjct: 268 LCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPN 327
Query: 377 KSAQKAVVDG 386
A++DG
Sbjct: 328 GITFTALIDG 337
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 205/403 (50%), Gaps = 14/403 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ ID C+ D + +L +M E P VTY +L+ G + L ++ +L++M+E
Sbjct: 47 VFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEK 106
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P + +Y ++ L + G+ +EA R+F DM+ P + ++ GLCK+ + A
Sbjct: 107 GNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEA 166
Query: 121 LRMFR--GLQKH--GFVPELVTYNILIKGLCKAGRLRTARWILK-ELGDSGHAPNAITYT 175
+++ +KH VP++VTY LI GLCKAGR+ AR + E + G P+A+TYT
Sbjct: 167 YALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYT 226
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
+I+ + + + G E M+ +GY D Y +I F+K + +A QM+
Sbjct: 227 SIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQS 286
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G + V+YN +++ CK G++ AY ME++G T++ L+DG C GN+ A
Sbjct: 287 GTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAA 346
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 351
M G + NL +YN I+ L + GK+ A FE + + D +T+++ +H
Sbjct: 347 VELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHG 406
Query: 352 LCKAKRLPSAS---KLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
LC +RL + S +L S + G + ++DG+ +G
Sbjct: 407 LC--QRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAG 447
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 149/308 (48%), Gaps = 9/308 (2%)
Query: 98 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 157
+P F +++NGLC+ + D A + + G P+ VTYN+ I GLCKA R+ A
Sbjct: 4 SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63
Query: 158 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 217
+LK++ + P +TYT ++ + + + +L M KG + Y VI
Sbjct: 64 LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC--- 274
K GR++EA M+ +G + D Y LI CK GK E AY L E +
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183
Query: 275 -DKYTHTILIDGLCKAGNIKGAR-LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
D T+T LIDGLCKAG I AR + + + GF + Y I+D L K G+++
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243
Query: 333 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
F M + D+ TY++++ KAK +P A ++ L+SG + ++DGL
Sbjct: 244 RFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLC 303
Query: 389 HSGCRREA 396
+G EA
Sbjct: 304 KAGRVAEA 311
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 174/373 (46%), Gaps = 9/373 (2%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
SPD+V + +I G R L + +L+ + G PD +YN + L + + D+A +
Sbjct: 4 SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
+ + M P T T+ +++GL K D A+ + + + G P L TY ++I GL
Sbjct: 64 LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK----YKLGLEILSAMKRKGYT 203
KAGR+ AR I ++ +G P+A YT ++K ++ K Y L E +
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183
Query: 204 FDGFGYCTVIAAFVKIGRLKEATD-YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
D Y ++I K GR+ EA + ++ V G D V+Y ++I+ CK G++E
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
EM +G+E D T+ LIDG KA I A M + G + YN I+D L
Sbjct: 244 RFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLC 303
Query: 323 KDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
K G++ A F +ME V TYS+++ C + +A +L L G
Sbjct: 304 KAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLV 363
Query: 379 AQKAVVDGLRHSG 391
+ ++ GL +G
Sbjct: 364 SYNIIIRGLCRAG 376
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 176/372 (47%), Gaps = 9/372 (2%)
Query: 2 LIDAYCQFVSFDAGYTILN----RMREAGISPDVVTYNSLIAGATR-NSLLSCSLDLLDE 56
LI C+ + Y + R A PDVVTY SLI G + +L DE
Sbjct: 153 LIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDE 212
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
+E G PD +Y S++ L +LG+ +E F +M P T+ +++G K +
Sbjct: 213 AVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKM 272
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
A R++R + + G V VTYNI++ GLCKAGR+ A + + G +TY+
Sbjct: 273 IPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSA 332
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
+M +E+ M +G + Y +I + G+L +A Y E+++
Sbjct: 333 LMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRR 392
Query: 237 VQLDIVSYNTLINLYCKE-GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
+ D+ ++N ++ C+ + L + M QG + ++++IL+DG+C+AG ++ A
Sbjct: 393 LCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVA 452
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYSSMVHNL 352
M G ++ +N ++ L G++D A+ VF +E D+++Y S++ L
Sbjct: 453 LEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAPDAWSYWSLLDGL 512
Query: 353 CKAKRLPSASKL 364
+ +R+ A L
Sbjct: 513 SRCERMEEARLL 524
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 162/341 (47%), Gaps = 9/341 (2%)
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
M PD+ ++ +++ L + + DEA V + + P T+N+ ++GLCK D+
Sbjct: 1 MPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDD 60
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A ++ + + + +P VTY L+ GL KAGRL A +L+++ + G++P TYT ++
Sbjct: 61 AFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVID 120
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD---- 235
+ + + I M G D F Y +I K G+ +EA ++
Sbjct: 121 GLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHA 180
Query: 236 GVQLDIVSYNTLINLYCKEGK-LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
D+V+Y +LI+ CK G+ LEA + DE ++GF D T+T +IDGLCK G ++
Sbjct: 181 TAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEE 240
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVH 350
M G++ + Y ++D K I A V+ M V + TY+ ++
Sbjct: 241 GCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILD 300
Query: 351 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
LCKA R+ A L+ + G A++DG G
Sbjct: 301 GLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEG 341
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 115/226 (50%), Gaps = 2/226 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D C+ Y M E G VVTY++L+ G +S +++L ML+
Sbjct: 297 IILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDR 356
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT-DN 119
G P++ SYN ++ L + GK +A F+ ++ L P TFN L+GLC+ T +
Sbjct: 357 GCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSD 416
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+ +F + G P L +Y+IL+ G+C+AG L A I +E+ G AP+ + + T+++
Sbjct: 417 GVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIR 476
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
+ LE+ ++R+ D + Y +++ + R++EA
Sbjct: 477 WLCIAGRVDEALEVFRELERRSAP-DAWSYWSLLDGLSRCERMEEA 521
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
D T++I+GLC+ + A LE + G + + YN +D L K ++D A +
Sbjct: 6 DMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLL 65
Query: 335 ESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
+ M+ K + TY+++V L KA RL A +L ++ G V+DGL +
Sbjct: 66 KKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKA 125
Query: 391 GCRREAKKI 399
G EA++I
Sbjct: 126 GRVEEARRI 134
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 209/406 (51%), Gaps = 7/406 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ YC DA ++ M + PD TYN+LI G S +L +L++M G
Sbjct: 140 MVAGYCGAGQLDAARRLVADM---PVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRG 196
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV +Y L+ + +A ++ +M P T+N++LNG+C+ ++A+
Sbjct: 197 CLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAM 256
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L +G P V+YNI++KGL A R A +++E+ G PN +T+ ++
Sbjct: 257 EFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFL 316
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + +E+L M + G T + Y ++ AF K ++ +A +++E MV+ G DI
Sbjct: 317 CRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDI 376
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
VSYNTL+ C+ G+++ A LL +++ +G ++ +IDGL KAG K A L+
Sbjct: 377 VSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDE 436
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF---ESMEVKDSFT-YSSMVHNLCKAKR 357
M G ++ Y+ I L ++ +I+ A+ F + M ++ + Y++++ LCK +
Sbjct: 437 MTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRE 496
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+A L + SG +S +V+GL + G +EA+++ +++
Sbjct: 497 THNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQL 542
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 170/337 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++A C+ + +L+ M + G +PD+VTYN ++ G + + +++ L +
Sbjct: 206 ILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSY 265
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ SYN ++ LF + ++A ++ ++M P TFN++++ LC+ + A
Sbjct: 266 GCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPA 325
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + ++G P ++YN L+ CK ++ A ++ + G P+ ++Y T++
Sbjct: 326 MEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTA 385
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
RN + + +E+L +K KG + Y TVI K G+ KEA + +++M + G+Q D
Sbjct: 386 LCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPD 445
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++Y+T+ + C+E ++E A +++ G + ++ GLCK A
Sbjct: 446 IITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFA 505
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
YM G N Y +V+ L +G + A +F +
Sbjct: 506 YMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQL 542
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 148/306 (48%), Gaps = 18/306 (5%)
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN---IMLNGLCKNRYTDNALRMF 124
S + L + G+ D+A R+ D + G P A ++ LC + T +A R+
Sbjct: 69 SATERLRVLVRRGELDDALRLV-DSLAGLNPPSPAAVGPCAALIKKLCASGRTADARRV- 126
Query: 125 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFR 183
L G P+++ YN ++ G C AG+L AR + + D P+A TY T+++ C R
Sbjct: 127 --LAASG--PDVMVYNAMVAGYCGAGQLDAARRL---VADMPVEPDAYTYNTLIRGLCGR 179
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
R L +L M R+G D Y ++ A K K+A +++M G DIV+
Sbjct: 180 GRTSN-ALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVT 238
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
YN ++N C+EG++E A L + G E + ++ I++ GL A + A +E M
Sbjct: 239 YNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMA 298
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLP 359
G N+ +N ++ L + G ++ A+ V E M +S +Y+ ++H CK K++
Sbjct: 299 HKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIH 358
Query: 360 SASKLL 365
A + +
Sbjct: 359 KAMEFV 364
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 95/168 (56%), Gaps = 6/168 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A C+ D +L+++++ G SP +++YN++I G T+ +L+LLDEM G
Sbjct: 382 LLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKG 441
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVF---QDMICGDLTPCTATFNIMLNGLCKNRYTD 118
+ PD+ +Y+++ L + + +EA R F QDM + P A +N +L GLCK R T
Sbjct: 442 LQPDIITYSTIASGLCREDRIEEAVRTFCKVQDM---GIRPTAALYNAILLGLCKRRETH 498
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
NA+ +F + G +P TY IL++GL G ++ AR + +L G
Sbjct: 499 NAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRG 546
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 113/237 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLI C+ + +L +M + G +P+ ++YN L+ + + +++ ++ M+
Sbjct: 311 MLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSR 370
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ SYN+L+ L + G+ D A + + +P ++N +++GL K T A
Sbjct: 371 GCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEA 430
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + G P+++TY+ + GLC+ R+ A ++ D G P A Y I+
Sbjct: 431 LELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLG 490
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ R+ +++ + M G + Y ++ G +KEA + Q+ + GV
Sbjct: 491 LCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGV 547
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 211/443 (47%), Gaps = 39/443 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ I+ +C+ +L +M + G PD+VT +SL+ G + +S ++ L+D+M+EM
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD +++ +L+H LF K EA + M+ P T+ ++NGLCK D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + ++K ++V YN +I GLCK + A + E+ + G P+ TY++++ C
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ +LS M + + + +I AFVK G+L EA ++M+ + D
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 241 I-----------------------------------VSYNTLINLYCKEGKLEAAYLLLD 265
I V+Y+TLI +CK ++E L
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM ++G + T+T LI G +A + A++ + M +G N+ YN ++D L K+G
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
K+ A+ VFE ++ D +TY+ M+ +CKA ++ +L + GV A
Sbjct: 483 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYN 542
Query: 382 AVVDGLRHSGCRREAKKIQSKIR 404
++ G G + EA + K++
Sbjct: 543 TMISGFCRKGSKEEADSLLKKMK 565
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 186/355 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ D ++L +M + I DVV YN++I G + + +L+L EM G
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV++Y+SL+ CL G+ +A+R+ DMI + P TF+ +++ K A
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + K P++ TY+ LI G C RL A+ + + + PN +TY+T++K
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ + G+E+ M ++G + Y T+I F + A +QMV+ GV +I
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 468
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN L++ CK GKL A ++ + +++ E D YT+ I+I+G+CKAG ++
Sbjct: 469 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAK 356
++ G N+ AYN ++ + G + A ++ + M+ S + L +A+
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRAR 583
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 193/394 (48%), Gaps = 4/394 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + F+ ++ +M+ GIS D+ TY+ I R S LS +L +L +M+++G
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ + +SL++ + +A + M+ P T TF +++GL + A+
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P+LVTY ++ GLCK G + A +LK++ + + Y TI+
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + L + + M KG D F Y ++I+ GR +A+ + M+ + ++
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+++ LI+ + KEGKL A L DEM K+ + D +T++ LI+G C + A+ E
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M N+ Y+ ++ K +++ + +F M V ++ TY++++H +A+
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+A + + GV ++DGL +G
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 161/336 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C++ D + M GI PDV TY+SLI+ S + LL +M+E
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V ++++L+ + GK EA +++ +MI + P T++ ++NG C + D A
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
MF + P +VTY+ LIKG CKA R+ + +E+ G N +TYTT++
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ R + M G + Y ++ K G+L +A E + ++ DI
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 503
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN +I CK GK+E + L + +G + + +I G C+ G+ + A L+
Sbjct: 504 YTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKK 563
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M + G N YN ++ +DG + + + + M
Sbjct: 564 MKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 166/330 (50%), Gaps = 1/330 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + + +L+ M E I+P+VVT+++LI + L + L DEM++
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+++Y+SL++ + DEA +F+ MI D P T++ ++ G CK + + +
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + + G V VTY LI G +A A+ + K++ G PN +TY ++
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N K + + ++R D + Y +I K G++++ + + GV ++
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNV 538
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YNT+I+ +C++G E A LL +M++ G + T+ LI + G+ + + ++
Sbjct: 539 IAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKE 598
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
M GF + + + L DG++D +
Sbjct: 599 MRSCGFAGDASTIGLVTNML-HDGRLDKSF 627
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 172/368 (46%), Gaps = 4/368 (1%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
+ D + M ++ P +V +N L++ + + + L ++M +GI D+++Y
Sbjct: 62 IKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTY 121
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
+ ++C + + A V M+ P T + +LNG C ++ +A+ + + +
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G+ P+ T+ LI GL + A ++ ++ G P+ +TY T++ + L
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
L +L M++ D Y T+I K + +A + +M G++ D+ +Y++LI+
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
C G+ A LL +M ++ + T + LID K G + A + M K D
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLL 365
++ Y+ +++ ++D A ++FE M KD F TYS+++ CKAKR+ +L
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 366 LSCLKSGV 373
+ G+
Sbjct: 422 REMSQRGL 429
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 147/327 (44%), Gaps = 39/327 (11%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K D+A +F DM+ P FN +L+ + K + + + +Q G +L TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
I I C+ +L A +L ++ G+ P+ +T ++++ +++ + ++ M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
GY D F + T+I + EA ++QMV G Q D+V+Y T++N CK G ++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
LL +MEK E D + +IDGLCK +
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKH----------------------------- 273
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
+D A+N+F M+ K D FTYSS++ LC R AS+LL ++ +
Sbjct: 274 ------MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327
Query: 377 KSAQKAVVDGLRHSGCRREAKKIQSKI 403
A++D G EA+K+ ++
Sbjct: 328 VVTFSALIDAFVKEGKLVEAEKLYDEM 354
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 118/245 (48%), Gaps = 4/245 (1%)
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
P+ + + ++ + K++L + + M+ G + D + Y I F + +L A
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+ +M+ G + DIV+ ++L+N YC ++ A L+D+M + G++ D +T T LI GL
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 344
A ++ M + G +L Y +V+ L K G ID A+++ + ME D
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
Y++++ LCK K + A L G+R +++ L + G +A ++ S +
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 405 MAKIS 409
KI+
Sbjct: 321 ERKIN 325
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 97/194 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + Q D + +M G+ P+++TYN L+ G +N L+ ++ + + +
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+++YN ++ + + GK ++ +F ++ ++P +N M++G C+ + A
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +++ G +P TYN LI+ + G + ++KE+ G A +A T +
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618
Query: 182 FRNRKYKLGLEILS 195
R K L++LS
Sbjct: 619 HDGRLDKSFLDMLS 632
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/152 (19%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ + ++ + + PD+ TYN +I G + + +L +
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK 532
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V +YN+++ + G +EA+ + + M P + T+N ++ ++ + +
Sbjct: 533 GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREAS 592
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
+ + ++ GF + T L+ + GRL
Sbjct: 593 AELIKEMRSCGFAGDASTIG-LVTNMLHDGRL 623
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ + G+ + + G+SP+V+ YN++I+G R + LL +M E
Sbjct: 508 IMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM----ICGDLTPCTATFNIMLNGLCKNRY 116
G P+ +YN+L+ + G + + + ++M GD + N++ +G +
Sbjct: 568 GPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSF 627
Query: 117 TD 118
D
Sbjct: 628 LD 629
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 195/368 (52%), Gaps = 4/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ + +L +M E G P++V Y ++I +++L++ ++DLL EM++ G
Sbjct: 203 VINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRG 262
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
IPPDV +Y++++H LG +EA +F +M+ ++ P T TF I+++GLCK A
Sbjct: 263 IPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEAR 322
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + K G P TYN L+ G C ++ A+ +L + D G AP +Y ++
Sbjct: 323 CVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGY 382
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R+ +L M K T D Y T++ ++GR +EA + ++M + G+ D+
Sbjct: 383 CKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDL 442
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y+TL++ CK G L+ A LL M++ E D + ILI+G+ AG ++ A+
Sbjct: 443 MTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSK 502
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G + Y ++ L K+G D A +F ME + +S +Y+ ++ + +
Sbjct: 503 LFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQD 562
Query: 358 LPSASKLL 365
+A +L+
Sbjct: 563 SSTAIRLI 570
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 192/403 (47%), Gaps = 4/403 (0%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
+S D RM P VV + + + S + L ++M G+ +V+S
Sbjct: 71 ISIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSL 130
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N L++CL +L A V M + P TFN ++NG C A+ +F + +
Sbjct: 131 NILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVR 190
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G P++++Y+ +I GLCK+G A +L+++ + G PN + YTTI+ ++
Sbjct: 191 RGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVND 250
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+++LS M +G D Y T++ F +G L EAT +MV V + V++ L++
Sbjct: 251 AMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVD 310
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
CKEG + A + + M K+G E + YT+ L+DG C + A+ L+ M G
Sbjct: 311 GLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAP 370
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
+ +YN +++ K ++D A ++ M K D+ TYS+++ LC+ R A L
Sbjct: 371 VVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLF 430
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
SG+ ++DGL G EA K+ ++ +KI
Sbjct: 431 KEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKI 473
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 195/408 (47%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ ++L +M + GI PD +T+N+LI G + ++ L +EM+
Sbjct: 132 ILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRR 191
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV SY+++++ L + G A ++ + M P + +++ LCK+ ++A
Sbjct: 192 GHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDA 251
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + G P++VTY+ ++ G C G L A + E+ PN +T+T ++
Sbjct: 252 MDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDG 311
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + AM +KG + + Y ++ + ++ EA ++ MV G
Sbjct: 312 LCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPV 371
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ SYN LIN YCK +L+ A LL EM ++ D T++ L+ GLC+ G + A +
Sbjct: 372 VHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFK 431
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G +L Y+ ++D L K G +D A+ + +SM+ D Y+ ++ + A
Sbjct: 432 EMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAG 491
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+L A +L G++ ++ GL G EA ++ K+
Sbjct: 492 KLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKME 539
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 157/323 (48%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ +C + + N M + P+ VT+ L+ G + ++S + + + M + G
Sbjct: 273 ILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKG 332
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ ++YN+LM + DEA +V M+ P ++NI++NG CK R D A
Sbjct: 333 AEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAK 392
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + P+ VTY+ L++GLC+ GR + A + KE+ SG P+ +TY+T++
Sbjct: 393 SLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGL 452
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ L++L +M+ D Y +I G+L+ A + ++ DG+Q I
Sbjct: 453 CKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTI 512
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y +I KEG + AY L +ME GF + ++ ++I G + + A ++
Sbjct: 513 RTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDE 572
Query: 302 MNKIGFDSNLEAYNCIVDRLGKD 324
M F ++ + ++D +D
Sbjct: 573 MVGKRFSADSSTFQMLLDLESRD 595
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 141/284 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ + M + G P+ TYN+L+ G N+ + + +LD M++
Sbjct: 307 ILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDK 366
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P V SYN L++ + + DEA + +M +LTP T T++ ++ GLC+ A
Sbjct: 367 GCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEA 426
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F+ + G +P+L+TY+ L+ GLCK G L A +LK + +S P+ + Y +++
Sbjct: 427 LNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEG 486
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F K ++ E+ S + G Y +I +K G EA + +M DG +
Sbjct: 487 MFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPN 546
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
SYN +I + + A L+DEM + F D T +L+D
Sbjct: 547 SCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLD 590
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 207/442 (46%), Gaps = 39/442 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ + RM+ G SPDVVTYNSLI G + L L+ EM +
Sbjct: 205 IVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKS 264
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G DV +YN+L++C + G+ ++A F +M + TF+ ++ CK A
Sbjct: 265 GCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEA 324
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT----- 175
+++F ++ G +P TY L+ G CKAGRL A +L E+ G PN +TYT
Sbjct: 325 MKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDG 384
Query: 176 ------------------------------TIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
T++ F N + L++L+ MK KG D
Sbjct: 385 LCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELD 444
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y T+I K ++ EA + +M G++ + V Y T+++ K GK A LL
Sbjct: 445 VSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLH 504
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
++ GF+ + T+ LIDGLCKAG+I A H M ++G D N++AY ++D K G
Sbjct: 505 KILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIG 564
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
++ A+++ M K D Y+S++ K L A L ++SG+++
Sbjct: 565 SLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYT 624
Query: 382 AVVDGLRHSGCRREAKKIQSKI 403
+ G + +EA+ + S++
Sbjct: 625 CFISGFCNMNMMQEARGVLSEM 646
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 184/381 (48%), Gaps = 14/381 (3%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN-- 86
P VV ++L++ + LL ++ L + ++ +PP+ + N H L +L + +
Sbjct: 134 PSVV--DTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCN---HILLRLARNRQGGLV 188
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
R D++ P TFNI+++ LCK A +F ++ G P++VTYN LI G
Sbjct: 189 RRLFDLLP---VPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGY 245
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
K G L ++ E+ SG A + +TY ++ C + + + MKR+G +
Sbjct: 246 GKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANV 305
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ T + AF K G ++EA QM G+ + +Y +L++ CK G+L+ A +LLDE
Sbjct: 306 VTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDE 365
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M QG + T+T+++DGLCK G + A L M + G +N Y ++ +
Sbjct: 366 MVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNN 425
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+ A+++ M+ K D Y +++ LCK +++ A LL G+R
Sbjct: 426 SERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTT 485
Query: 383 VVDGLRHSGCRREAKKIQSKI 403
++D L +G EA + KI
Sbjct: 486 IMDALFKAGKESEAVALLHKI 506
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 164/372 (44%), Gaps = 35/372 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+DA+C+ + +MR G+ P+ TY SL+ G + L ++ LLDEM+ G
Sbjct: 311 FVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQG 370
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG----------- 110
+ P+V +Y ++ L + GK EA+ V M G + + +++G
Sbjct: 371 LVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERAL 430
Query: 111 ------------------------LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
LCK++ D A + + G P V Y ++ L
Sbjct: 431 DLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDAL 490
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
KAG+ A +L ++ DSG PN +TY ++ + + + M+ G +
Sbjct: 491 FKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNV 550
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I F KIG L +A M +M+ G+ LD V Y +LI+ Y K+ L+ A+ L +
Sbjct: 551 QAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTK 610
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M + G + D Y +T I G C ++ AR L M G + YNC++ + K G
Sbjct: 611 MIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGN 670
Query: 327 IDHAINVFESME 338
++ A ++ ME
Sbjct: 671 MEEASSLQNEME 682
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 123/257 (47%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+LN+M+ G+ DV Y +LI G ++ + + LL +M G+ P+ Y ++M LF
Sbjct: 432 LLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALF 491
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ GK EA + ++ P T+ +++GLCK A+ F +++ G P +
Sbjct: 492 KAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQ 551
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
Y LI G CK G L A ++ E+ D G + + + YT+++ + + + + M
Sbjct: 552 AYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKM 611
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
G D + Y I+ F + ++EA + +M+ G+ D YN LI Y K G +
Sbjct: 612 IESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNM 671
Query: 258 EAAYLLLDEMEKQGFEC 274
E A L +EME C
Sbjct: 672 EEASSLQNEMESVLSSC 688
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 203/407 (49%), Gaps = 4/407 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ YC+ ++ M + + PDV TYN LI G + + L DEM +
Sbjct: 283 ILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENL 342
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PDV SYN+L++ + K EA ++ ++M + P T NIM+ CK D+A
Sbjct: 343 KLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDA 402
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ GF P+ VTYN LI G CKAG + A + E+G +++T TI++
Sbjct: 403 SNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRT 462
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R +K + ++LS+ +++GY D Y T+I + K G + A ++M +
Sbjct: 463 LCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+YN +I C+ GK E A L+E+ + G D+ T+ ++ G C+ G+++ A
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHN 582
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + F ++ N ++ L +G ++ A+ +F + K D+ TY++++ +LCK
Sbjct: 583 KMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEG 642
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
RL A LL + + A++ L SG REA++ SK+
Sbjct: 643 RLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 187/358 (52%), Gaps = 4/358 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I YC F LN M + SPD VTYN+++ + L + DLL +M
Sbjct: 213 IVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSR 272
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ +YN L++ ++G EA V + M +L P T+N+++NGLC + A
Sbjct: 273 GLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEA 332
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ ++ +P++V+YN LI G + ++ A +L+E+ + G PNA+T+ ++K
Sbjct: 333 FKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKW 392
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K ++ M+ G++ D Y T+I + K G + EA M++M +++D
Sbjct: 393 YCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMD 452
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+ NT++ C+E KLE AY LL K+G+ D+ ++ LI G K GN+ A +
Sbjct: 453 SVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWD 512
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN----VFESMEVKDSFTYSSMVHNLCK 354
M + + YNCI+ L + GK + AI+ + ES + D TY++++H C+
Sbjct: 513 EMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCR 570
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 192/382 (50%), Gaps = 4/382 (1%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
GI P+V T+N +I G + +++ L+ M + PD +YN+++ L + G+ +A
Sbjct: 203 GIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDA 262
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+ DM L P T+NI++ G CK + A + + ++ +P++ TYN+LI G
Sbjct: 263 RDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLING 322
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LC GR+ A + E+ + P+ ++Y T++ C K ++L M KG +
Sbjct: 323 LCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPN 382
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ ++ + K G++ +A++ + +M G D V+YNTLIN YCK G + A+ +D
Sbjct: 383 AVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMD 442
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM ++ + D T ++ LC+ ++ A L K G+ + +Y ++ KDG
Sbjct: 443 EMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDG 502
Query: 326 KIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+D A+ +++ M+ K+ + TY+ ++ LC+ + A L L+SG+ ++
Sbjct: 503 NVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYN 562
Query: 382 AVVDGLRHSGCRREAKKIQSKI 403
++ G G +A + +K+
Sbjct: 563 TILHGYCREGDVEKAFQFHNKM 584
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 182/399 (45%), Gaps = 10/399 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ YC+ D + +M E+G SPD VTYN+LI G + + + +DEM
Sbjct: 388 IMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRK 447
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ D + N+++ L + K +EA ++ ++ ++ G K+ D A
Sbjct: 448 NMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRA 507
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L+++ +++ +P VTYN +I GLC+ G+ A L EL +SG P+ TY TI+
Sbjct: 508 LKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHG 567
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + + + M + D F ++ G L++A V+ G +D
Sbjct: 568 YCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAID 627
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+YNTLI CKEG+L+ A+ LL EME++ D YT+ +I L +G I+ A E
Sbjct: 628 TVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAE---E 684
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPS 360
+M+K+ LE L D + S YS + LC +
Sbjct: 685 FMSKM-----LEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKD 739
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGL--RHSGCRREAK 397
A ++ + G+ + KS ++DGL R +EA+
Sbjct: 740 AMRIFGESKQKGITVDKSTYINLMDGLIKRRKSISKEAR 778
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 184/389 (47%), Gaps = 9/389 (2%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE--- 84
SP ++ I ++ + + +M + + P++ + N+L++ L +
Sbjct: 132 SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLC-KNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+ F D I + P TFNI++ G C +N++ D A+ + K+ P+ VTYN ++
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKD-AVEFLNVMGKYNCSPDNVTYNTIL 250
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
LCK GRL AR +L ++ G PN TY ++ + K ++ M +
Sbjct: 251 DALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D + Y +I GR++EA ++M + D+VSYNTLIN + K+ A+ L
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
L+EM ++G + + TH I++ CK G + A + M + GF + YN +++ K
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430
Query: 324 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
G + A + M K DS T ++++ LC+ K+L A KLL S K G I + +
Sbjct: 431 AGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVS 490
Query: 380 QKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
++ G G A K+ +++ +I
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEI 519
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 186/344 (54%), Gaps = 6/344 (1%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
S D VTY SLI G + L +L L +M+ G PDV++Y +++H L + EA +
Sbjct: 8 SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
++M +LTP T+ ++++GLCK D A+ + ++K VP VTYN LI GLC
Sbjct: 68 FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLC 126
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
KA R A +L+E+ SG P+ TYTT++ +++K L + + +G+ D
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL-DIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I K GRLKEA D +M+ G + + V+YN+LI+ +C+ GK++ A LL+
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M + G D T+T L++G CK + A L M + G ++ + ++D L ++ +
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306
Query: 327 IDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLL 366
+ A+++ M K +TY++++ C+A +L A K +L
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFML 350
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 195/368 (52%), Gaps = 11/368 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ D +L++MR+ + P VTYNSLI+G + S + DLL+EM+
Sbjct: 86 VLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYS 144
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+++Y +L+ + K D+A RVF+ ++ P T++ +++GLCK A
Sbjct: 145 GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEA 204
Query: 121 LRMFRGLQKHGF-VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+ +F + K G +P VTYN LI G C+ G++ A +L+ + ++G +P+ +TYTT+M
Sbjct: 205 IDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMN 264
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + ++L+ M RKG T D + +++ + RL +A + +M
Sbjct: 265 GFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSP 324
Query: 240 DIVSYNTLINLYCKEGKLEAAY-LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+ +YNT+++ YC+ +LE A +L+EM+ + + I+I GLCK A
Sbjct: 325 TVYTYNTILDGYCRANQLEEARKFMLEEMDCPP---NVVSFNIMIRGLCKVNRSSEAMEL 381
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-----VKDSFTYSSMVHNLC 353
+E + + ++ Y ++D L ++ K+D A V+ M + +S TYS++V LC
Sbjct: 382 VEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLC 441
Query: 354 KAKRLPSA 361
A L A
Sbjct: 442 NAGMLDRA 449
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 159/338 (47%), Gaps = 43/338 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
LID C+ + RM ++G P+ VTYNSLI+G R + +++LL+ M E
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 250
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +Y +LM+ +L + D+A + M LTP TF +++GLC+ +A
Sbjct: 251 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDA 310
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + +++ P + TYN ++ G C+A +L AR + E D PN +++ +++
Sbjct: 311 VHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDC--PPNVVSFNIMIR- 367
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
G C K+ R EA + +E+ D
Sbjct: 368 ---------------------------GLC-------KVNRSSEAMELVEEARRRRCNPD 393
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+V Y T+I+ C+E K++ A + +M E+ G + T++ L+ GLC AG + AR ++
Sbjct: 394 VVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI 453
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
E G N+ YN ++D K + + A + + M
Sbjct: 454 EK----GCVPNIGTYNLLIDAFRKANRDEDARELLDDM 487
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 3/144 (2%)
Query: 232 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
+ T+ D V+Y +LI CK +LE A + L +M +GF D YT+T +I LC
Sbjct: 2 VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYSSM 348
+ AR LE M N+ Y ++D L K G++D A+ + M V + TY+S+
Sbjct: 62 LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSL 121
Query: 349 VHNLCKAKRLPSASKLLLSCLKSG 372
+ LCKA+R A LL + SG
Sbjct: 122 ISGLCKAERASEAYDLLEEMVYSG 145
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 186/344 (54%), Gaps = 6/344 (1%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
S D VTY SLI G + L +L L +M+ G PDV++Y +++H L + EA +
Sbjct: 8 SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
++M +LTP T+ ++++GLCK D A+ + ++K VP VTYN LI GLC
Sbjct: 68 FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLC 126
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
KA R A +L+E+ SG P+ TYTT++ +++K L + + +G+ D
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL-DIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I K GRLKEA D +M+ G + + V+YN+LI+ +C+ GK++ A LL+
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M + G D T+T L++G CK + A L M + G ++ + ++D L ++ +
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306
Query: 327 IDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLL 366
+ A+++ M K +TY++++ C+A +L A K +L
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFML 350
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 195/368 (52%), Gaps = 11/368 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ D +L++MR+ + P VTYNSLI+G + S + DLL+EM+
Sbjct: 86 VLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYS 144
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+++Y +L+ + K D+A RVF+ ++ P T++ +++GLCK A
Sbjct: 145 GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEA 204
Query: 121 LRMFRGLQKHGF-VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+ +F + K G +P VTYN LI G C+ G++ A +L+ + ++G +P+ +TYTT+M
Sbjct: 205 IDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMN 264
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + ++L+ M RKG T D + +++ + RL +A + +M
Sbjct: 265 GFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSP 324
Query: 240 DIVSYNTLINLYCKEGKLEAAY-LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+ +YNT+++ YC+ +LE A +L+EM+ + + I+I GLCK A
Sbjct: 325 TVYTYNTILDGYCRANQLEEARKFMLEEMDCPP---NVVSFNIMIRGLCKVNRSSEAMEL 381
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-----VKDSFTYSSMVHNLC 353
+E + + ++ Y ++D L ++ K+D A V+ M + +S TYS+++ LC
Sbjct: 382 VEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLC 441
Query: 354 KAKRLPSA 361
A L A
Sbjct: 442 NAGMLDRA 449
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 159/338 (47%), Gaps = 43/338 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
LID C+ + RM ++G P+ VTYNSLI+G R + +++LL+ M E
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 250
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +Y +LM+ +L + D+A + M LTP TF +++GLC+ +A
Sbjct: 251 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDA 310
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + +++ P + TYN ++ G C+A +L AR + E D PN +++ +++
Sbjct: 311 VHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDC--PPNVVSFNIMIR- 367
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
G C K+ R EA + +E+ D
Sbjct: 368 ---------------------------GLC-------KVNRSSEAMELVEEARRRRCNPD 393
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+V Y T+I+ C+E K++ A + +M E+ G + T++ LI GLC AG + AR ++
Sbjct: 394 VVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYI 453
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
E G N+ YN ++D K + + A + + M
Sbjct: 454 EK----GCVPNIGTYNLLIDAFRKANRDEDARELLDDM 487
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 3/144 (2%)
Query: 232 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
+ T+ D V+Y +LI CK +LE A + L +M +GF D YT+T +I LC
Sbjct: 2 VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYSSM 348
+ AR LE M N+ Y ++D L K G++D A+ + M V + TY+S+
Sbjct: 62 LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSL 121
Query: 349 VHNLCKAKRLPSASKLLLSCLKSG 372
+ LCKA+R A LL + SG
Sbjct: 122 ISGLCKAERASEAYDLLEEMVYSG 145
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 203/407 (49%), Gaps = 4/407 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ YC+ ++ M + + PDV TYN LI G + + L DEM +
Sbjct: 283 ILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENL 342
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PDV SYN+L++ + K EA ++ ++M + P T NIM+ CK D+A
Sbjct: 343 KLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDA 402
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ GF P+ VTYN LI G CKAG + A + E+G +++T TI++
Sbjct: 403 SNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRT 462
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R +K + ++LS+ +++GY D Y T+I + K G + A ++M +
Sbjct: 463 LCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+YN +I C+ GK E A L+E+ + G D+ T+ ++ G C+ G+++ A
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHN 582
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + F ++ N ++ L +G ++ A+ +F + K D+ TY++++ +LCK
Sbjct: 583 KMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEG 642
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
RL A LL + + A++ L SG REA++ SK+
Sbjct: 643 RLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 187/358 (52%), Gaps = 4/358 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I YC F LN M + SPD VTYN+++ + L + DLL +M
Sbjct: 213 IVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSR 272
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ +YN L++ ++G EA V + M +L P T+N+++NGLC + A
Sbjct: 273 GLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEA 332
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ ++ +P++V+YN LI G + ++ A +L+E+ + G PNA+T+ ++K
Sbjct: 333 FKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKW 392
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K ++ M+ G++ D Y T+I + K G + EA M++M +++D
Sbjct: 393 YCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMD 452
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+ NT++ C+E KLE AY LL K+G+ D+ ++ LI G K GN+ A +
Sbjct: 453 SVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWD 512
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN----VFESMEVKDSFTYSSMVHNLCK 354
M + + YNCI+ L + GK + AI+ + ES + D TY++++H C+
Sbjct: 513 EMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCR 570
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 192/382 (50%), Gaps = 4/382 (1%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
GI P+V T+N +I G + +++ L+ M + PD +YN+++ L + G+ +A
Sbjct: 203 GIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDA 262
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+ DM L P T+NI++ G CK + A + + ++ +P++ TYN+LI G
Sbjct: 263 RDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLING 322
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LC GR+ A + E+ + P+ ++Y T++ C K ++L M KG +
Sbjct: 323 LCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPN 382
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ ++ + K G++ +A++ + +M G D V+YNTLIN YCK G + A+ +D
Sbjct: 383 AVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMD 442
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM ++ + D T ++ LC+ ++ A L K G+ + +Y ++ KDG
Sbjct: 443 EMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDG 502
Query: 326 KIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+D A+ +++ M+ K+ + TY+ ++ LC+ + A L L+SG+ ++
Sbjct: 503 NVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYN 562
Query: 382 AVVDGLRHSGCRREAKKIQSKI 403
++ G G +A + +K+
Sbjct: 563 TILHGYCREGDVEKAFQFHNKM 584
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 183/399 (45%), Gaps = 10/399 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ YC+ D + +M E+G SPD VTYN+LI G + + + +DEM
Sbjct: 388 IMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRK 447
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ D + N+++ L + K +EA ++ ++ ++ G K+ D A
Sbjct: 448 NMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRA 507
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L+++ +++ +P VTYN +I GLC+ G+ A L EL +SG P+ TY TI+
Sbjct: 508 LKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHG 567
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + + + M + D F ++ G L++A V+ G +D
Sbjct: 568 YCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAID 627
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+YNTLI CKEG+L+ A+ LL EME++ D YT+ +I L +G I+ A E
Sbjct: 628 TVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAE---E 684
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPS 360
+M+K+ LE N L D + S YS + LC +
Sbjct: 685 FMSKM-----LEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKD 739
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGL--RHSGCRREAK 397
A ++ + G+ + KS ++DGL R +EA+
Sbjct: 740 AMRIFGESKQKGITVDKSTYINLMDGLIKRRKSISKEAR 778
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 184/389 (47%), Gaps = 9/389 (2%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE--- 84
SP ++ I ++ + + +M + + P++ + N+L++ L +
Sbjct: 132 SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLC-KNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+ F D I + P TFNI++ G C +N++ D A+ + K+ P+ VTYN ++
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKD-AVEFLNVMGKYNCSPDNVTYNTIL 250
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
LCK GRL AR +L ++ G PN TY ++ + K ++ M +
Sbjct: 251 DTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D + Y +I GR++EA ++M + D+VSYNTLIN + K+ A+ L
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
L+EM ++G + + TH I++ CK G + A + M + GF + YN +++ K
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430
Query: 324 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
G + A + M K DS T ++++ LC+ K+L A KLL S K G I + +
Sbjct: 431 AGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVS 490
Query: 380 QKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
++ G G A K+ +++ +I
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEI 519
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/476 (26%), Positives = 214/476 (44%), Gaps = 74/476 (15%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+AYC+ ++ ++ MRE G S +VVTYN+LI G R + + EM + G
Sbjct: 249 LIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYG 308
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD ++Y ++++ L + G+PD+A + +M C L P ++ +++G + D A
Sbjct: 309 LVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAF 368
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + + G P +TY+ LI+GLCK GR+ A ILK++ G+ + +TY +++
Sbjct: 369 KIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGH 428
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + +L+ M++ G + + + Y +I +IG + A+ +EQM+ DG++ +
Sbjct: 429 LRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNA 488
Query: 242 VSYNTLINLYCKE-----------------------------------GKLEAAYLLLDE 266
Y LI+ YC+E GK++ A DE
Sbjct: 489 FVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDE 548
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN-------LEA------ 313
M ++GF+ + +T+ LI G AGN++ A L M G + N LE
Sbjct: 549 MLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDN 608
Query: 314 ----------------------YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSS 347
Y ++ L G + A++V +E V DS Y S
Sbjct: 609 LEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGS 668
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++ CKA + A LL K G+ S A++DG S A+ I + I
Sbjct: 669 LISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSI 724
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 189/412 (45%), Gaps = 11/412 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ + + + + + +LN MR+ GISP+V TY+ +I G + + LL++M+
Sbjct: 423 LVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIAD 482
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ + Y L+ + G A + M +LTP +N ++ GL D A
Sbjct: 483 GLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEA 542
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + + GF P TY LI G AG L A +L ++ +SG PN Y I++
Sbjct: 543 IEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEG 602
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F++ + L +M KG D Y VI G ++ A + + +G+ D
Sbjct: 603 YFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPD 662
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ Y +LI+ +CK +E A LLDEM K+G E + LIDG CK+ +I AR
Sbjct: 663 SLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFN 722
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
+ G N Y ++D K G I AI+++ M + D+F YS + +
Sbjct: 723 SIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSG 782
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
L A + + G I+ S + L H C+R K+Q ++ +
Sbjct: 783 DLQQALFITEEMIARGYAIISS-----FNTLVHGFCKR--GKLQETVKFLHV 827
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 163/391 (41%), Gaps = 74/391 (18%)
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
M ++G+ P + N L+ L + D +V M ++P T++ ++ CK R
Sbjct: 199 MKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRD 258
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKA--------------------------- 149
++A ++ +++ G +VTYN LI GLC+A
Sbjct: 259 LESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGA 318
Query: 150 --------GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
GR A+ +L E+ +G PN + Y+T++ R +I+ M G
Sbjct: 319 IINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAG 378
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ Y +I K+GR+ A+ ++QM G D ++YN +I + ++ E A+
Sbjct: 379 VQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAF 438
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN----------- 310
LLL+EM K G + YT++I+I+GLC+ G + A LE M G N
Sbjct: 439 LLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGY 498
Query: 311 ------------------------LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
L YN ++ L GK+D AI ++ M K +
Sbjct: 499 CREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPND 558
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
FTY ++H A L A +LL L SG+
Sbjct: 559 FTYGGLIHGYSMAGNLEKAEQLLHQMLNSGL 589
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 133/277 (48%), Gaps = 4/277 (1%)
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
V ++L+ K GR+R ++ + D G AP+ ++K R L ++
Sbjct: 174 VVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGF 233
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M+ G + D + Y T+I A+ K+ L+ A +E+M G L++V+YNTLI C+ G
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+E A+ EME G D +T+ +I+GLCK G A+ L+ M+ G N+ Y+
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST 353
Query: 317 IVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++D + G D A + + M + TY +++ LCK R+ AS++L K G
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIG 413
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
V++G + EA + +++R IS
Sbjct: 414 YMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGIS 450
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 155/357 (43%), Gaps = 23/357 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI Y + + +L++M +G++P+ Y ++ G ++ L L MLE G
Sbjct: 564 LIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKG 623
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD Y ++H L G A V + L P + + +++G CK + A+
Sbjct: 624 LMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAV 683
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K G P + YN LI G CK+ + AR I + G PN +TYTT++
Sbjct: 684 GLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGY 743
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + +++ + M +G D F Y + A G L++A E+M+ G + I
Sbjct: 744 CKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAI-I 802
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
S+NTL++ +CK GKL+ L M + T ++ GL +AG +
Sbjct: 803 SSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLS-------- 854
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGK---IDHAINVFESMEVKDSFTYSSMVHNLCKA 355
EA+ V+ K+ DH ++F M + ++HN+ ++
Sbjct: 855 ----------EAHTIFVELQQKNASHRDTDHLSSLFTDM-INQGLVPLDVIHNMIQS 900
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 187/340 (55%), Gaps = 2/340 (0%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + MR + + P VVT+N+LI+G R L L EM ++G+ PDV++Y +L+
Sbjct: 208 VFDEMRRS-VQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFC 266
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G+ + A ++F +M + P F +++ CK + + +++ ++ G +P+LV
Sbjct: 267 RTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLV 326
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
YN L+ GLC+A L+ A I++E+ ++G P+ +TYTT++ C ++ K + ++I M
Sbjct: 327 AYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKM 386
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K + D Y +I+ K GR +A + +M+ ++ D +Y +I+ +C++G +
Sbjct: 387 AEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDV 446
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ + LL EM+ +G + T+ ++++GLCK G +K A + L M IG + YN +
Sbjct: 447 KTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNIL 506
Query: 318 VDRLGKDGKIDHAINVFESME-VKDSFTYSSMVHNLCKAK 356
+D K GK+ ++ + S V D Y+S++ L K K
Sbjct: 507 LDGQCKHGKVANSEELESSKGMVPDFAVYTSLISELAKKK 546
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 176/350 (50%), Gaps = 5/350 (1%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
++L+ G+ P+ +N LM +LG+ A +VF +M + P TFN +++G+C+ R
Sbjct: 176 QLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMR-RSVQPTVVTFNTLISGMCRAR 234
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D +++ + G P++ TY LIKG C+ GR+ A + E+ D+G PNA+ +T
Sbjct: 235 DLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFT 294
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T++ + G+++ M+ +G D Y ++ + LK A +E+M
Sbjct: 295 TLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNA 354
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G++ D V+Y TLI+ CK+GKL+ A + +M ++ D+ T+T LI GL KAG A
Sbjct: 355 GLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDA 414
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHN 351
L M + + + Y ++D + G + + + M+ K TY+ +++
Sbjct: 415 ERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNG 474
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
LCK ++ +A LL + L GV ++DG G +++++S
Sbjct: 475 LCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELES 524
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 145/288 (50%), Gaps = 5/288 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ + + N MR+ G++P+ V + +LI + ++ +DL +M G
Sbjct: 261 LIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRG 320
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ +YN+L++ L + A + ++M L P T+ +++G CK+ D A+
Sbjct: 321 VMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAM 380
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + + + VTY LI GL KAGR A +L+E+ ++ P+ TYT ++
Sbjct: 381 DIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAF 440
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R K G ++L M+ KG Y ++ K+G++K A + M+ GV D
Sbjct: 441 CRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDD 500
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEME-KQGFECDKYTHTILIDGLCK 288
++YN L++ CK GK+ + +E+E +G D +T LI L K
Sbjct: 501 ITYNILLDGQCKHGKVANS----EELESSKGMVPDFAVYTSLISELAK 544
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 132/282 (46%), Gaps = 9/282 (3%)
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
T A + L G PE +N+L++ + G L +AR + E+ S P +T+ T
Sbjct: 167 TPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRSVQ-PTVVTFNT 225
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ R R + M G D + Y +I F + GR++ A +M G
Sbjct: 226 LISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTG 285
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
V + V + TLI+ +CKEG + A L +M +G D + L++GLC+A N+K A
Sbjct: 286 VNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAE 345
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
+E M G + Y ++D KDGK+D A+++ + M K D TY++++ L
Sbjct: 346 SIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGL 405
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
KA R A ++L +++ + + V+D CR+
Sbjct: 406 SKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAF----CRK 443
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 100/198 (50%), Gaps = 5/198 (2%)
Query: 216 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
FV++G L A ++M VQ +V++NTLI+ C+ L+A L EM G + D
Sbjct: 196 FVRLGELVSARKVFDEM-RRSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPD 254
Query: 276 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
YT+ LI G C+ G ++ A M G + N + ++D K+G ++ +++++
Sbjct: 255 VYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQ 314
Query: 336 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
M V+ D Y+++V+ LC+A+ L +A ++ +G++ K ++DG G
Sbjct: 315 DMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDG 374
Query: 392 CRREAKKIQSKIRMAKIS 409
A I+ K+ ++S
Sbjct: 375 KLDMAMDIKQKMAEKEVS 392
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 59/148 (39%), Gaps = 38/148 (25%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M+IDA+C+ G+ +L M+ G P VVTYN ++ G + + + LL ML +
Sbjct: 435 MVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNI 494
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD T+NI+L+G CK+ N+
Sbjct: 495 GVSPD-----------------------------------DITYNILLDGQCKHGKVANS 519
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCK 148
+ G VP+ Y LI L K
Sbjct: 520 EELE---SSKGMVPDFAVYTSLISELAK 544
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 117/357 (32%), Positives = 193/357 (54%), Gaps = 21/357 (5%)
Query: 25 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 84
+G SP++VT+ LI G + + +L+ L + E + PDV+ +N L+H LF+ G PD+
Sbjct: 56 SGCSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQ 115
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG--FVPELVTYNIL 142
A ++F++M + P T+N +++GLCK+ + A + + + G P++VTYN L
Sbjct: 116 AVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTL 175
Query: 143 IK-GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMKRK 200
I G+CK G + A IL + +G AP+ ITY +I+ C R + EIL M
Sbjct: 176 INAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVE-AAEILKTMS-- 232
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
+ D + T++ F K G L A + +E+M + + D+++Y L+N C+ G+++ A
Sbjct: 233 -CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVA 291
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK---------GARLHLEYMNKIGFDSNL 311
+ LL+E+ +QG+ D +T L+DGLCK+G I+ AR L M I L
Sbjct: 292 FYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPL 351
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 364
YN ++ L KDG I A+++ + V D TY++++ LCKA R+ A L
Sbjct: 352 FTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDL 408
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 196/400 (49%), Gaps = 19/400 (4%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYN 70
D + M + ++PD+ TYN++I+G ++ L + +LL+EM+ G PD+ +YN
Sbjct: 114 DQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYN 173
Query: 71 SLMHC-LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
+L++ + + G +EA + M P T+N +++ LC A + + +
Sbjct: 174 TLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSC 233
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
P+LVT+N L+ G CKAG L A +L+E+ P+ ITYT ++ R + ++
Sbjct: 234 S---PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQV 290
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS------ 243
+L + R+GY D Y +++ K G ++EA +++M + ++VS
Sbjct: 291 AFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPP 350
Query: 244 ---YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
YN ++ K+G + A L+ ++ +G+ D T+ LIDGLCKA ++ A +
Sbjct: 351 LFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLAD 410
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M +G N +V L + G++D A ++ M K + Y+S++ LCK+
Sbjct: 411 EMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSD 470
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
R+ A +L + GV + A + ++ + H G EA
Sbjct: 471 RMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEA 510
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 185/383 (48%), Gaps = 50/383 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRM-REAGIS-PDVVTYNSLI-AGATRNSLLSCSLDLLDEML 58
+I C+ + + +L M R G S PD+VTYN+LI AG ++ + +L++LD M
Sbjct: 138 VISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMK 197
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G PDV +YNS++H L G+ EA + + M C +P TFN +L+G CK
Sbjct: 198 LAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSC---SPDLVTFNTLLDGFCKAGMLP 254
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
AL + + + +P+++TY IL+ GLC+ G+++ A ++L+E+ G+ P+ I YT+++
Sbjct: 255 RALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLV 314
Query: 179 ----KCCFRNRKYKL-----GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
K +KL EIL+ M F Y V+ +K G + +A +
Sbjct: 315 DGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLI 374
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKE----------------------------------- 254
+V G D+V+YNTLI+ CK
Sbjct: 375 SDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRV 434
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
G+++ A+ L+ EM ++ + +T LIDGLCK+ + A + L+ M G + AY
Sbjct: 435 GRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAY 494
Query: 315 NCIVDRLGKDGKIDHAINVFESM 337
++ + G++ A+ +++ M
Sbjct: 495 RKLIVSMIHGGRVAEAMAMYDEM 517
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 179/387 (46%), Gaps = 54/387 (13%)
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G DV SYN L+ L + G +V++D++ +P TF I++ G CK A
Sbjct: 22 GYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRA 81
Query: 121 LRMFRGLQK--------------HGFV---------------------PELVTYNILIKG 145
L R L + HG P++ TYN +I G
Sbjct: 82 LEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISG 141
Query: 146 LCKAGRLRTARWILKELGDSG--HAPNAITYTTIMKCCF-RNRKYKLGLEILSAMKRKGY 202
LCK+G L AR +L+E+ G AP+ +TY T++ ++ + LEIL MK G
Sbjct: 142 LCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGP 201
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
D Y ++I A GR+ EA + ++ M D+V++NTL++ +CK G L A
Sbjct: 202 APDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALE 258
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
+L+EM ++ D T+TIL++GLC+ G ++ A LE + + G+ ++ AY +VD L
Sbjct: 259 VLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLC 318
Query: 323 KDGKIDHAINVFESMEVKDS-------------FTYSSMVHNLCKAKRLPSASKLLLSCL 369
K G+I+ A + + M ++ FTY+ ++ L K + A L+ +
Sbjct: 319 KSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLV 378
Query: 370 KSGVRILKSAQKAVVDGLRHSGCRREA 396
G ++DGL + REA
Sbjct: 379 ARGYVPDVVTYNTLIDGLCKANRVREA 405
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 142/290 (48%), Gaps = 9/290 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D +C+ +L M I PDV+TY L+ G R + + LL+E++ G
Sbjct: 243 LLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQG 302
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANR---------VFQDMICGDLTPCTATFNIMLNGLC 112
PDV +Y SL+ L + G+ +EA++ + +M+ ++ P T+NI+L GL
Sbjct: 303 YIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLI 362
Query: 113 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
K+ A+ + L G+VP++VTYN LI GLCKA R+R A + E+ G PN +
Sbjct: 363 KDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDV 422
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
T +++ R + ++ M RK + + Y ++I K R+ +A ++ M
Sbjct: 423 TLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAM 482
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
GV LD +Y LI G++ A + DEM +GF D T L
Sbjct: 483 RGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 532
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 128/243 (52%), Gaps = 6/243 (2%)
Query: 128 QKHGFVPELVTYNILIKGLCKAG-RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
++ G+ ++ +YN L+ L K+G + RT + + K+L SG +PN +T+ +++ + +
Sbjct: 19 EQDGYKHDVHSYNHLLDILVKSGHQFRTGK-VYKDLLHSGCSPNLVTFKILIRGNCKAGQ 77
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
LE L A+ D + + +I K G +A E M + V DI +YNT
Sbjct: 78 ATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNT 137
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHTILID-GLCKAGNIKGARLHLEYMN 303
+I+ CK G LE A LL+EM ++G + D T+ LI+ G+CK G+++ A L+ M
Sbjct: 138 VISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMK 197
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-DSFTYSSMVHNLCKAKRLPSAS 362
G ++ YN I+ L G++ A + ++M D T+++++ CKA LP A
Sbjct: 198 LAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRAL 257
Query: 363 KLL 365
++L
Sbjct: 258 EVL 260
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 85/178 (47%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
S ++++ + G PDVVTYN+LI G + + + + DL DEM +G P+ +
Sbjct: 366 SISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLG 425
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
S++ L ++G+ D+A + +M P + +++GLCK+ D+A + ++
Sbjct: 426 SVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQ 485
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
G + Y LI + GR+ A + E+ G P+ T T+ + N ++
Sbjct: 486 GVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNSVFE 543
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 100/231 (43%), Gaps = 45/231 (19%)
Query: 183 RNRKYKLGLEILS-AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ + L ++ A ++ GY D Y ++ VK G + ++ G ++
Sbjct: 3 RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNL 62
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL--------------- 286
V++ LI CK G+ A L +++ D Y LI GL
Sbjct: 63 VTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFEN 122
Query: 287 --------------------CKAGNIKGARLHLEYMNKIGFDS--NLEAYNCIVDR-LGK 323
CK+GN++ AR LE M + G S ++ YN +++ + K
Sbjct: 123 MESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICK 182
Query: 324 DGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL--LSC 368
DG ++ A+ + + M++ D TY+S++H LC A R+ A+++L +SC
Sbjct: 183 DGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSC 233
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 217/443 (48%), Gaps = 39/443 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D + D ++L M + G P VVTY+SL+A + SL L DEM+ G
Sbjct: 569 LVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKG 628
Query: 62 IPPDVWSYNSLMHCLFQ----------------------LG-------------KPDEAN 86
DV +Y+ +++CL + LG K D A
Sbjct: 629 CVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFAL 688
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
++F ++ L P T +NIM+NGL K+ D A ++ ++ +P+L TY L+ GL
Sbjct: 689 QIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGL 748
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
K+GRL A + ++ + GH P+ + YT++M + K L I AM +K D
Sbjct: 749 GKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDV 808
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y ++I + K GR++EA + E ++ G ++ Y++LI+ + K+G ++ A L +E
Sbjct: 809 VTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEE 868
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+++ + T+ L+ GL KAG + A LE M K+G +L YN ++D +GK G
Sbjct: 869 MQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGM 928
Query: 327 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+D A + F+ M+ V D T++S++ +L K +L A +L S + G
Sbjct: 929 VDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNV 988
Query: 383 VVDGLRHSGCRREAKKIQSKIRM 405
++D L +G EA I ++++
Sbjct: 989 LIDILGRAGKVHEAAMIFHEMKV 1011
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 200/400 (50%), Gaps = 4/400 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A+ D +L M++ P VVTY +L+ G + L ++ LL EM + G
Sbjct: 534 LMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQG 593
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y+SLM ++ + +E+ +F +M+ +T+++++N LCK+ D AL
Sbjct: 594 CEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQAL 653
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++ G P L Y L+ L K ++ A I EL +S P+ Y ++
Sbjct: 654 DVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGL 713
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + +++ +MK + D F Y +++ K GRL+EA + +M +G + D+
Sbjct: 714 VKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDV 773
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y +L+++ K GKL A ++ M K+ D T++ LID L K G ++ A E
Sbjct: 774 VAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFEN 833
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
G N+ Y+ ++D GK G +D A+ +FE M+ + + TY++++ L KA R
Sbjct: 834 SISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGR 893
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
L A KLL K G ++DG+ G EA+
Sbjct: 894 LNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAE 933
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/438 (29%), Positives = 210/438 (47%), Gaps = 35/438 (7%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDA + + D N M+ SP+VVTY +L+ G + L + ++ EM E
Sbjct: 327 VLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKEN 386
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PD +YN+L+ L + G+ D A +F++M L P T+NIM++ L K A
Sbjct: 387 NCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEA 446
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL------------GDSGH- 167
++F L++ G VP++ TYN LI L K G++ I+KE+ ++GH
Sbjct: 447 WQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHE 506
Query: 168 ------------------APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 209
+ ITY T+M N +++L MK+ Y
Sbjct: 507 GTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTY 566
Query: 210 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
T++ K GRL EA + +M G + +V+Y++L+ + K + E + L DEM +
Sbjct: 567 TTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVR 626
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 329
+G D T++++I+ LCK+ ++ A M + G + L Y ++ L KD KID
Sbjct: 627 KGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDF 686
Query: 330 AINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 385
A+ +F ES V D+F Y+ MV+ L K+ R+ A KL+ S + +++D
Sbjct: 687 ALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLD 746
Query: 386 GLRHSGCRREAKKIQSKI 403
GL SG EA + +K+
Sbjct: 747 GLGKSGRLEEAFNMFTKM 764
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 192/384 (50%), Gaps = 9/384 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ D + RM+E G+ P + Y +L++ ++ + +L + +E+ E
Sbjct: 638 LVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQES 697
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD + YN +++ L + + DEA ++ M ++ P T+ +L+GL K+ + A
Sbjct: 698 SLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEA 757
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
MF + + G P++V Y L+ L K G+L A I + + P+ +TY++++
Sbjct: 758 FNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDS 817
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + KG T + Y ++I +F K G + A + E+M +
Sbjct: 818 LGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPN 877
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+YN L++ K G+L A LL+EMEK G D T+ ILIDG+ K G + A + +
Sbjct: 878 IVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFK 937
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + G ++ + +++ LGK K+ A +F+SME + TY+ ++ L +A
Sbjct: 938 RMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAG 997
Query: 357 RLPSASKL-----LLSCLKSGVRI 375
++ A+ + + C+ G+ I
Sbjct: 998 KVHEAAMIFHEMKVKGCMPDGITI 1021
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 175/363 (48%), Gaps = 16/363 (4%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
I N+M+ G +P YN ++ + ++ + ++ + I PD ++ +H
Sbjct: 239 IFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFN 298
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G+ D A Q+MI + P TF ++++ L K+ D A + F G++ P +V
Sbjct: 299 RSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVV 358
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY L+ GL KAGRL A + E+ ++ +P+AI Y T++ + + + + M
Sbjct: 359 TYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEM 418
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K +G + Y +I+ K GR EA + G D+ +YNTLI++ K G++
Sbjct: 419 KDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQM 478
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN---IKGARLHLEYMNKIGFDSNLE-A 313
+ ++ EM ++G EC +I AG+ I+GA +EY + +GF S E
Sbjct: 479 DKVLAIIKEMVEKGGEC-------IISRDSNAGHEGTIEGADRTVEYPS-LGFKSLGEIT 530
Query: 314 YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 369
YN ++ +G +D A+ + E M+ + TY+++V L KA RL A LL
Sbjct: 531 YNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREME 590
Query: 370 KSG 372
K G
Sbjct: 591 KQG 593
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 139/281 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D + + + + +M E G PDVV Y SL+ + LS +L + M +
Sbjct: 744 LLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKR 803
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV +Y+SL+ L + G+ +EA F++ I TP ++ +++ K D AL
Sbjct: 804 CVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRAL 863
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +Q+ P +VTYN L+ GL KAGRL A +L+E+ G P+ +TY ++
Sbjct: 864 ELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGV 923
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ MK KG D + ++I + K+ +L EA + + M +G +
Sbjct: 924 GKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSV 983
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
V+YN LI++ + GK+ A ++ EM+ +G D T I+
Sbjct: 984 VTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 185/411 (45%), Gaps = 35/411 (8%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
+ + + ++ + I PD T+ + R+ L + + + EM++ GI P V ++
Sbjct: 268 YHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTV 327
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
L+ L + G DEA + F M +P T+ ++NGL K + A +F ++++
Sbjct: 328 LIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENN 387
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
P+ + YN LI GL KAG A + KE+ D G PN TY ++ + +
Sbjct: 388 CSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAW 447
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ------------- 238
++ +K +G D F Y T+I K G++ + +++MV G +
Sbjct: 448 QLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEG 507
Query: 239 ------------------LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
L ++YNTL++ + G ++ A LL+ M+K T+T
Sbjct: 508 TIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYT 567
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 338
L+DGL KAG + A L M K G + ++ Y+ ++ K + + ++++F+ M
Sbjct: 568 TLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRK 627
Query: 339 --VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
V D TYS +++ LCK+ + A + + G+ L K ++ L
Sbjct: 628 GCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSL 678
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 142/318 (44%), Gaps = 6/318 (1%)
Query: 23 REAGISPDVVTYNSLI---AGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 79
++ G S V TY +I AGA + + +L M + G + SL+
Sbjct: 174 QQDGYSHTVGTYTLMIKRLAGAQETDAV---VQILTAMWKEGHRISMHLLTSLLRTFGST 230
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
A +F M P T +N +L L K + +A+ +F L + P+ T+
Sbjct: 231 NNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTF 290
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
I + ++GRL A ++E+ SG P T+T ++ ++ + + MK
Sbjct: 291 RIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKN 350
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
+ + Y T++ K GRL+EA + +M + D ++YNTLI+ K G+ +
Sbjct: 351 LRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADM 410
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A L EM+ +G + T+ I+I L KAG A + + G ++ YN ++D
Sbjct: 411 ACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLID 470
Query: 320 RLGKDGKIDHAINVFESM 337
LGK G++D + + + M
Sbjct: 471 VLGKGGQMDKVLAIIKEM 488
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 52/107 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID + D + RM+E GI PDV+T+ SLI + L + +L D M E
Sbjct: 918 ILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEE 977
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 107
G P V +YN L+ L + GK EA +F +M P T IM
Sbjct: 978 GYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 4/168 (2%)
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
DG + +Y +I + +A +L M K+G + T L+ N+ G
Sbjct: 176 DGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSG 235
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVH 350
A M G + + YN +++ L K G A+ VF + D+ T+ VH
Sbjct: 236 ALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVH 295
Query: 351 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
+ ++ RL A++ + +KSG+ ++D L SG EA K
Sbjct: 296 SFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACK 343
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 118/393 (30%), Positives = 195/393 (49%), Gaps = 39/393 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLI C+ GY +L MR+ I P+ VTYN+L+ G + + + LL+EML
Sbjct: 268 MLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTF 327
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR----- 115
G+ P+ ++N+L+ G EA ++F M L ++ ++L+GLCKN
Sbjct: 328 GLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLA 387
Query: 116 ------------------------------YTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+ D A+ M + K G P++VTY+ LI G
Sbjct: 388 RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALING 447
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
C+ GRL+TA+ I+ + G +PN I Y+T++ C R K + I AM +G T D
Sbjct: 448 FCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPD 507
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
F + ++ + K G++ EA ++M M +DG+ + VS++ LIN Y G+ A+ + D
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFD 567
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM K G +T+ L+ GLCK G++ A L+ + + + N ++ + K G
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSG 627
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCK 354
+D A+++F M + DSFTY+S++ LC+
Sbjct: 628 NLDKAVSLFGEMVQRSILPDSFTYTSLISGLCR 660
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 178/366 (48%), Gaps = 4/366 (1%)
Query: 6 YCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD 65
YC+ F A +L+ M G++ DV TYN LI R++ + LL +M + I P+
Sbjct: 238 YCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPN 297
Query: 66 VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 125
+YN+L++ GK A ++ +M+ L+P TFN +++G AL+MF
Sbjct: 298 EVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFH 357
Query: 126 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 185
++ G + V+Y +L+ GLCK AR + +G ITYT ++ +N
Sbjct: 358 MMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
+ +L+ M + G D Y +I F ++GRLK A + + ++ G+ + + Y+
Sbjct: 418 FLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYS 477
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
TLI C+ G L+ + + M +G D +T +L+ LCKAG + A + M
Sbjct: 478 TLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 537
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSA 361
G N +++C+++ G G+ A +VF+ M FTY S++ LCK L +A
Sbjct: 538 GILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAA 597
Query: 362 SKLLLS 367
K L S
Sbjct: 598 EKFLKS 603
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 190/399 (47%), Gaps = 6/399 (1%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
++ L M + I PDV T+N LI S L+ +M + G P + +YN+++H
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHW 237
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
+ G+ A + M + T+N++++ LC++ + + R ++K P
Sbjct: 238 YCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPN 297
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
VTYN L+ G G++ AR +L E+ G +PN +T+ ++ +K L++
Sbjct: 298 EVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFH 357
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M+ KG Y ++ K A + +M +GV + ++Y +I+ CK G
Sbjct: 358 MMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
L+ A ++L+EM K G + D T++ LI+G C+ G +K A+ + + ++G N Y+
Sbjct: 418 FLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYS 477
Query: 316 CIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++ + G + I ++E+M D FT++ +V +LCKA ++ A + +
Sbjct: 478 TLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 537
Query: 372 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
G+ + +++G SG +A + + M K+ H
Sbjct: 538 GILPNAVSFDCLINGYGSSGEGLKAFSVFDE--MTKVGH 574
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 178/413 (43%), Gaps = 77/413 (18%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ D +LN M + GI PD+VTY++LI G R L + +++ + +G
Sbjct: 409 MIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVG 468
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK-------- 113
+ P+ Y++L++ ++G E R+++ MI TP TFN+++ LCK
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAE 528
Query: 114 ----------------------NRYTDN-----ALRMFRGLQKHGFVPELVTYNILIKGL 146
N Y + A +F + K G P TY L+KGL
Sbjct: 529 EFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK G L A LK L + P A+ T+M
Sbjct: 589 CKGGHLIAAEKFLKSLQN---VPAAV--DTVM---------------------------- 615
Query: 207 FGYC-TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
C T+I A K G L +A +MV + D +Y +LI+ C++GK A L
Sbjct: 616 ---CNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAK 672
Query: 266 EMEKQG-FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
E E +G +K +T +DG+ KAG K + M+K+G ++ N ++D +
Sbjct: 673 EAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRM 732
Query: 325 GKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
GKI+ ++ M ++ TY+ ++H K K + ++ L S + SG+
Sbjct: 733 GKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGI 785
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 155/350 (44%), Gaps = 6/350 (1%)
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
P V ++ L+ + G ++ +F+ M P T N +L + K+ +
Sbjct: 123 PSV--FDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSF 180
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
+ + K P++ T+NILI LC G + + ++++++ SG+AP +TY T++ +
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
++K +E+L M KG D Y +I + R + + M + + V+
Sbjct: 241 KGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVT 300
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
YNTL+N + EGK+ A LL+EM G + T LIDG GN K A M
Sbjct: 301 YNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMME 360
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLP 359
G +Y ++D L K+ + D A + M+ TY+ M+ LCK L
Sbjct: 361 AKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 420
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
A +L K G+ A+++G G + AK+I +I +S
Sbjct: 421 EAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLS 470
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/446 (20%), Positives = 186/446 (41%), Gaps = 40/446 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS---------------- 45
LI A C+ + D ++ M + I PD TY SLI+G R
Sbjct: 619 LITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARG 678
Query: 46 -------LLSCSLD-------------LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
+ +C +D +M ++G+ DV + N+++ ++GK ++
Sbjct: 679 NLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKT 738
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+ + +M + P T+NI+L+G K ++ + ++R + G +P+ +T +I G
Sbjct: 739 HDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILG 798
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
+C++ L ILK G + T+ ++ C N + ++++ M G + D
Sbjct: 799 ICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLD 858
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+++ + R +E+ + +M G+ + Y L+N C+ G ++ A+++ +
Sbjct: 859 KNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKE 918
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM + ++ L K G A L L M K+ + ++ ++ K+G
Sbjct: 919 EMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNG 978
Query: 326 KIDHAIN---VFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+ A+ V + +K D +Y+ ++ LC + A +L + G + K
Sbjct: 979 NVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYK 1038
Query: 382 AVVDGLRHSGCRREAKKIQSKIRMAK 407
A+V G+ G I K +A+
Sbjct: 1039 ALVGGILSQGTEFSGTDIILKDLLAR 1064
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 133/290 (45%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ Y + + + M +GI PD +T S+I G +++L L +L +
Sbjct: 759 ILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICR 818
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ D ++N L+ G+ + A + M ++ T + +++ L +N +
Sbjct: 819 GVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQES 878
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K G PE Y L+ GLC+ G ++TA + +E+ P + + +++
Sbjct: 879 RMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 938
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K +L +M + + T++ F K G + EA + M G++LD
Sbjct: 939 LAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLD 998
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+VSYN LI C +G + A+ L +EM++ GF + T+ L+ G+ G
Sbjct: 999 LVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQG 1048
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 108/250 (43%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLI C + + ++N M GIS D T +++++ RN S +L EM +
Sbjct: 829 MLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQ 888
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+ Y L++ L ++G A V ++MI + P + M+ L K D A
Sbjct: 889 GISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 948
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ R + K VP + ++ L+ CK G + A + + + G + ++Y ++
Sbjct: 949 SLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITG 1008
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ E+ MKR G+ + Y ++ + G TD + + + +
Sbjct: 1009 LCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDIILKDLLARGFIT 1068
Query: 241 IVSYNTLINL 250
+S+N +IN
Sbjct: 1069 AMSFNHMINF 1078
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 117/274 (42%), Gaps = 20/274 (7%)
Query: 146 LCKAGRLRTARWILKEL----GDSGHA------------PNAITYTTIMKCCFRNRKYKL 189
L +A AR ILKEL G S N + +++ R +
Sbjct: 82 LVRARMYDPARHILKELSLMSGKSSFVFGALMATYRLCNSNPSVFDILIRVYLREGMIQD 141
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
LEI M G+ + ++ + VK ++++M+ + D+ ++N LIN
Sbjct: 142 SLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKRKICPDVATFNILIN 201
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
+ C EG + + L+ +MEK G+ T+ ++ CK G K A L++MN G ++
Sbjct: 202 VLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNA 261
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
++ YN ++ L + + + M + + TY+++++ ++ A +LL
Sbjct: 262 DVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLL 321
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L G+ A++DG G +EA K+
Sbjct: 322 NEMLTFGLSPNHVTFNALIDGHISEGNFKEALKM 355
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 200/368 (54%), Gaps = 4/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ + + +M + P+VVTYN++I ++ L++ +++ L EM++ G
Sbjct: 207 VINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRG 266
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
IPPDV +YN+++H LG+ +EA R+F++M+ ++ P T TFNI+++GLCK A
Sbjct: 267 IPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEAR 326
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P TYN L+ G C ++ A +L + G APN +Y ++
Sbjct: 327 CVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGY 386
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++++ +LS M K T D Y T++ ++GR +EA + ++M + G+ D+
Sbjct: 387 CKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDL 446
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y+ L++ +CK G L+ A LL EM ++ + + +TILI G+ AG ++ A+
Sbjct: 447 MAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSK 506
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
++ G ++ YN ++ L K+G D A F ME + DS +Y+ ++ + +
Sbjct: 507 LSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQD 566
Query: 358 LPSASKLL 365
+A +L+
Sbjct: 567 SSTAIQLI 574
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 191/403 (47%), Gaps = 4/403 (0%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
+S D T RM P VV + + + S ++ L ++M G+ +V+S
Sbjct: 75 ISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSL 134
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N L++CL +L D A V M + P TFN ++NGLC A+ +F +
Sbjct: 135 NVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVW 194
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G P +++YN +I GLCK G A + +++ + PN +TY TI+ ++R
Sbjct: 195 SGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNE 254
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+E LS M +G D Y T++ F +G+L EAT ++MV V D V++N L++
Sbjct: 255 AVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVD 314
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
CKEG + A + + M ++G E + YT+ L+DG C + A L M G
Sbjct: 315 GLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAP 374
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
NL +YN +++ K +++ A + M K D+ TYS+++ LC+ R A L
Sbjct: 375 NLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLF 434
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
SG+ A ++DG G EA K+ ++ +I
Sbjct: 435 KEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRI 477
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 194/408 (47%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ D +++ +M + GI PD +T+N+LI G + ++ L +EM+
Sbjct: 136 VLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS 195
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V SYN++++ L + G A RVF+ M P T+N +++ LCK+R + A
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEA 255
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P++VTYN ++ G C G+L A + KE+ P+ +T+ ++
Sbjct: 256 VEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDG 315
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + M KG + + Y ++ + ++ EA + M+ G +
Sbjct: 316 LCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPN 375
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ SYN LIN YCK ++ A LL EM ++ D T++ L+ GLC+ G + A +
Sbjct: 376 LSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFK 435
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G +L AY+ ++D K G +D A+ + + M + + Y+ ++ + A
Sbjct: 436 EMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAG 495
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+L A +L G+R ++ GL G EA + K+
Sbjct: 496 KLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKME 543
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 145/284 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ + M E G P+ TYN+L+ G ++ + ++ +L M+
Sbjct: 311 ILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGK 370
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P++ SYN L++ + + +EA R+ +M +LTP T T++ ++ GLC+ A
Sbjct: 371 GCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREA 430
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F+ + G +P+L+ Y+IL+ G CK G L A +LKE+ + PN I YT +++
Sbjct: 431 LNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRG 490
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F K ++ E+ S + G D + Y +I +K G EA ++ +M DG D
Sbjct: 491 MFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPD 550
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
SYN +I + + A L+DEM + F D T +L+D
Sbjct: 551 SCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLD 594
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 126/249 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D YC D +L M G +P++ +YN LI G ++ ++ + LL EM E
Sbjct: 347 LMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKN 406
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y++LM L Q+G+P EA +F++M L P ++I+L+G CK+ + D AL
Sbjct: 407 LTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEAL 466
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + + + P ++ Y ILI+G+ AG+L A+ + +L G P+ TY ++K
Sbjct: 467 KLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGL 526
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ E M+ G+ D Y +I F++ A +++MV D
Sbjct: 527 LKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADS 586
Query: 242 VSYNTLINL 250
++ L++L
Sbjct: 587 STFQMLLDL 595
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 206/409 (50%), Gaps = 5/409 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID Y + D + M G+ P + TYNSL+ + + + +++L M E
Sbjct: 48 ILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEK 107
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEA-NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G PDV +Y++++ L + GK EA +F MI + T +N ++NGLCK+ +
Sbjct: 108 GFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIER 167
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A ++ + G+VP+ +TYN ++ GLC+ G++ A+ + G++P+ + Y ++
Sbjct: 168 AYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLD 227
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
++ K +++ + KGY D Y +++ + + EA + ++MV G
Sbjct: 228 ALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAP 287
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ +Y+ +++ +C+ K++ A+ +L+EM K G D T+ IL+DGLCK + A
Sbjct: 288 NGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELF 347
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKA 355
M G ++ +Y+ +++ L K K+ A +F+ M V D T++ ++ LCKA
Sbjct: 348 STMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKA 407
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+L A LL SG A +++GLR G +A ++ ++
Sbjct: 408 GKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMK 456
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 201/404 (49%), Gaps = 5/404 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ ++C+ GY + +M + GISPD + YN LI G + + + L +EM+ +
Sbjct: 13 VVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSV 72
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P +++YNSL++ + K EA +F+ M P T++ +++GLCK A
Sbjct: 73 GLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEA 132
Query: 121 LRM-FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
L M F + + G V YN LI GLCK + A +L+E+ G+ P+ ITY TI+
Sbjct: 133 LEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILS 192
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
R K + +M +GY+ D Y ++ A K G+ EA + ++ G
Sbjct: 193 GLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMP 252
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D V+YN+++ ++ ++ A + +M G + T++I++ G C+A + A L
Sbjct: 253 DTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVL 312
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
E M+KIG ++ YN ++D L K +D A +F +M D +YS +++ LCK
Sbjct: 313 EEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKT 372
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
++ A L ++ + ++DGL +G EAK +
Sbjct: 373 NKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDL 416
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 187/371 (50%), Gaps = 7/371 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
MRE SP+ T+ ++ + L L ++ML+ GI PD YN L+ + G+
Sbjct: 1 MREC--SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGR 58
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
DEANR++++M+ L P T+N +LN CK A+ +F+ + + GF P++VTY+
Sbjct: 59 VDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYST 118
Query: 142 LIKGLCKAGRLRTA-RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
+I GLCK G++ A + ++ + G + N + Y ++ ++ + ++L M K
Sbjct: 119 IISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASK 178
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
GY D Y T+++ ++G++ EA + + M + G D+V+YN L++ KEGK + A
Sbjct: 179 GYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEA 238
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
L ++ +G+ D T+ ++ GL + N+ A + M G N Y+ ++
Sbjct: 239 MKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSG 298
Query: 321 LGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
+ K+D A V E M V D TY+ ++ LCK + A +L + + +G
Sbjct: 299 HCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 358
Query: 377 KSAQKAVVDGL 387
+ V++GL
Sbjct: 359 IVSYSVVLNGL 369
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 170/323 (52%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ ++M E G S + V YN+LI G ++ + + LL+EM G PD +YN+++ L
Sbjct: 136 LFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLC 195
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
++GK EA + F M +P +N +L+ L K TD A+++F+ + G++P+ V
Sbjct: 196 RMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTV 255
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN ++ GL + + A + K++ SG APN TY+ ++ R +K ++L M
Sbjct: 256 TYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEM 315
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ G D Y ++ K + +A + MV +G DIVSY+ ++N CK K+
Sbjct: 316 SKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKV 375
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A +L D M ++ D T IL+DGLCKAG + A+ L+ M G + AYN +
Sbjct: 376 HDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTL 435
Query: 318 VDRLGKDGKIDHAINVFESMEVK 340
++ L K G+ A + ++M+ K
Sbjct: 436 MNGLRKQGRHIQADRLTQAMKEK 458
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 111/197 (56%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
+ D + +M +G +P+ TY+ +++G R + + +L+EM ++G PDV +YN
Sbjct: 269 NMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYN 328
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
L+ L + D+A+ +F M+ P +++++LNGLCK +A +F + +
Sbjct: 329 ILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIER 388
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
VP++VT+NIL+ GLCKAG+L A+ +L ++ SG AP+ + Y T+M + ++
Sbjct: 389 KLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQA 448
Query: 191 LEILSAMKRKGYTFDGF 207
+ AMK KG+ D F
Sbjct: 449 DRLTQAMKEKGFLSDCF 465
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 88/166 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ +C+ D + +L M + G PDVVTYN L+ G + +L+ + +L M++
Sbjct: 294 IVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDN 353
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ SY+ +++ L + K +A +F MI L P TFNI+++GLCK D A
Sbjct: 354 GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEA 413
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+ + G P+ V YN L+ GL K GR A + + + + G
Sbjct: 414 KDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 459
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 72/135 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ D + + + M + G +PD+V+Y+ ++ G + + + + L D M+E
Sbjct: 329 ILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIER 388
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PDV ++N LM L + GK DEA + M C P +N ++NGL K A
Sbjct: 389 KLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQA 448
Query: 121 LRMFRGLQKHGFVPE 135
R+ + +++ GF+ +
Sbjct: 449 DRLTQAMKEKGFLSD 463
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 187/372 (50%), Gaps = 6/372 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M++D + FD + + M G SP+VVTY +LI G R + L DEM+E
Sbjct: 163 MVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEK 222
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P V Y L+ L + EA +F+ M + P T+N M++G CK + A
Sbjct: 223 KIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKA 282
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +++ + G +P +VT+ ILI GLCK + +AR L ++ G PN Y ++
Sbjct: 283 LELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDG 342
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ L + S +++ D F Y +I + R++EA +++M G +
Sbjct: 343 YCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPN 402
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHL 299
V+YNTLI+ YCKEG +E A + +M ++G E + T + LIDG CKAG ++ A L+
Sbjct: 403 AVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYT 462
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKA 355
E + K G ++ AY ++D KDG A + + M+ + FT S ++ LCK
Sbjct: 463 EMVIK-GLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521
Query: 356 KRLPSASKLLLS 367
R+ A KL L+
Sbjct: 522 GRISDAIKLFLA 533
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 190/392 (48%), Gaps = 54/392 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C ++ MR +G+ P++ TYN+++ G + + + +L+L EML
Sbjct: 233 ILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGD 292
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V ++ L+ L + + A + DM + P +N +++G CK A
Sbjct: 293 GLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEA 352
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + ++KH +P++ TY+ILIKGLC R+ A +L+E+ G PNA+TY T++
Sbjct: 353 LSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLID- 411
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
GYC K G +++A + QM G++ +
Sbjct: 412 ---------------------------GYC-------KEGNMEKAIEVCSQMTEKGIEPN 437
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
I++++TLI+ YCK GK+EAA L EM +G D +T LIDG K GN K A RLH
Sbjct: 438 IITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHK 497
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF-----------------ESMEVKDS 342
E M + G N+ +C++D L KDG+I AI +F S+ +
Sbjct: 498 E-MQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNH 556
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC R+ ASK SG+R
Sbjct: 557 VMYTALIQGLCTDGRIFKASKFFSDMRCSGLR 588
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 191/395 (48%), Gaps = 9/395 (2%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
+ +L+R+ + +P+V + LI + L+ +L + +M + P + + N ++
Sbjct: 113 FNVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVY---YKMDVLPAMQACNMVLDG 167
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
L + G+ D +V+ DM+ +P T+ +++G C+ A R+F + + P
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT 227
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
+V Y ILI+GLC R+ A + + + +SG PN TY T+M + K LE+
Sbjct: 228 VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQ 287
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M G + + +I K + A ++ M + GV +I YN LI+ YCK G
Sbjct: 288 EMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAG 347
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
L A L E+EK D +T++ILI GLC ++ A L+ M K GF N YN
Sbjct: 348 NLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYN 407
Query: 316 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++D K+G ++ AI V M K + T+S+++ CKA ++ +A L +
Sbjct: 408 TLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK 467
Query: 372 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
G+ A A++DG G +EA ++ +++ A
Sbjct: 468 GLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEA 502
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 132/288 (45%), Gaps = 15/288 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C + +L M++ G P+ VTYN+LI G + + ++++ +M E
Sbjct: 373 ILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEK 432
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P++ ++++L+ + GK + A ++ +M+ L P + +++G K+ T A
Sbjct: 433 GIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEA 492
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL-------------KELGDSGH 167
R+ + +Q+ G P + T + LI GLCK GR+ A + EL S
Sbjct: 493 FRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLC 552
Query: 168 APNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
+PN + YT +++ C R +K + S M+ G D F +I + L++
Sbjct: 553 SPNHVMYTALIQGLCTDGRIFKAS-KFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVM 611
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
++ G+ + Y L Y + G L++A +++ G C
Sbjct: 612 MLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGIGC 659
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 186/362 (51%), Gaps = 4/362 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + M GI PDVVT+N+L+ R + ++ +L+EM G+ PD ++ +LM
Sbjct: 167 SVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGF 226
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ G + A RV M+ + T N+++NG CK ++AL + GF P+
Sbjct: 227 VEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQ 286
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+TYN + GLC+ + A ++ + GH P+ TY ++ C +N + + IL+
Sbjct: 287 ITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQ 346
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M +G D + T+IAA RL+EA D Q+ GV D+ ++N LIN CK G
Sbjct: 347 MVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGD 406
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
A L +EM+ G D+ T+ LID LC G + A L+ M G + YN
Sbjct: 407 PHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNT 466
Query: 317 IVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
I+D L K +I+ A VF+ M++ +++ T+++++ LCK K++ A +L+ + G
Sbjct: 467 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 526
Query: 373 VR 374
++
Sbjct: 527 LQ 528
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 201/401 (50%), Gaps = 5/401 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ + + + G PD +TYN+ + G +N + +L ++D M++
Sbjct: 256 VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE 315
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV++YN +++CL + G+ +EA + M+ P TFN ++ LC + A
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + R + G P++ T+NILI LCK G A + +E+ +SG P+ +TY T++
Sbjct: 376 LDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDN 435
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K L++L M+ G Y T+I K R++EA + +QM G+ +
Sbjct: 436 LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 495
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++NTLI+ CK+ K++ A+ L+++M +G + + T+ ++ CK G+IK A LE
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 555
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M GF+ ++ Y +++ L K G+ A+ V M +K Y+ ++ +L +
Sbjct: 556 TMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRN 615
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGL-RHSGCRREA 396
+ A L + G K V GL R G +EA
Sbjct: 616 NIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEA 656
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 201/408 (49%), Gaps = 4/408 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A C+ +L M G++PD T+ +L+ G + +L + MLEMG
Sbjct: 187 LMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ N L++ +LG+ ++A Q I P T+N +NGLC+N + +AL
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + + G P++ TYNI++ LCK G+L A+ IL ++ D G P+ T+ T++
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + L++ + KG + D + + +I A K+G A E+M G D
Sbjct: 367 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 426
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTLI+ C GKL A LL +ME G T+ +IDGLCK I+ A +
Sbjct: 427 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M+ G N +N ++D L KD KID A + M + ++ TY+S++ + CK
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD 546
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
+ A+ +L + +G + +++GL +G + A K+ +R+
Sbjct: 547 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI 594
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 185/381 (48%), Gaps = 7/381 (1%)
Query: 13 DAGYTILNRMREA-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
DA ILN+++ GI D V YN L+ S + + EM GI PDV ++N+
Sbjct: 127 DAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 186
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM L + + A + ++M + P TF ++ G + + ALR+ + + G
Sbjct: 187 LMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246
Query: 132 FVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
VT N+LI G CK GR+ A +I +E+ D G P+ ITY T + +N
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHA 305
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
L+++ M ++G+ D F Y V+ K G+L+EA + QMV G DI ++NTLI
Sbjct: 306 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 365
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
C +LE A L ++ +G D YT ILI+ LCK G+ A E M G +
Sbjct: 366 LCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPD 425
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLL 366
YN ++D L GK+ A+++ + ME + + TY++++ LCK R+ A ++
Sbjct: 426 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485
Query: 367 SCLKSGVRILKSAQKAVVDGL 387
G+ ++DGL
Sbjct: 486 QMDLQGISRNAITFNTLIDGL 506
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 124/283 (43%), Gaps = 36/283 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+A C+ + M+ +G +PD VTYN+LI L +LDLL +M
Sbjct: 396 ILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST 455
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +YN+++ L + + +EA VF M ++ TFN +++GLCK++ D+A
Sbjct: 456 GCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDA 515
Query: 121 LRMF-----RGLQKH------------------------------GFVPELVTYNILIKG 145
+ GLQ + GF ++VTY LI G
Sbjct: 516 FELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLING 575
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCKAGR + A +L+ + G P Y +++ FR + L + M G D
Sbjct: 576 LCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPD 635
Query: 206 GFGYCTVIAAFVKIG-RLKEATDYMEQMVTDGVQLDIVSYNTL 247
Y V + G +KEA D+M +MV G + S+ L
Sbjct: 636 ALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRML 678
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 129/308 (41%), Gaps = 42/308 (13%)
Query: 107 MLNGLCKNRYTDNALRMFRG-LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
+L L + D ALRM L + F P Y +I+ L G L + ++ E+
Sbjct: 44 LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRRE 103
Query: 166 GH-------------------------------------APNAITYTTIMKCCFRNRKYK 188
GH + + Y ++ K K
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
L + S M +G D + T++ A + +++ A +E+M + GV D ++ TL+
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLM 223
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
+ +EG +EAA + M + G K T +LI+G CK G ++ A +++ GF+
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE 283
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
+ YN V+ L ++ + HA+ V + M + D FTY+ +V+ LCK +L A +
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343
Query: 365 LLSCLKSG 372
L + G
Sbjct: 344 LNQMVDRG 351
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 36/185 (19%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ D + ++N+M G+ P+ +TYNS++ + + + D+L+ M G
Sbjct: 502 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
DV +Y +L++ L + G+ A +V + M + P +N +L L + +AL
Sbjct: 562 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 621
Query: 122 RMFRGLQK------------------------------------HGFVPELVTYNILIKG 145
+FR + + GF+PE ++ +L +G
Sbjct: 622 SLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681
Query: 146 LCKAG 150
L G
Sbjct: 682 LLNLG 686
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 209/400 (52%), Gaps = 10/400 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ F+ G +L M E G++PD+++Y +LI ++ L +++L DEM
Sbjct: 154 ILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVR 213
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDN 119
G+ PDV YN L+ + G +AN +++ ++ + P T+NIM+NGLCK D
Sbjct: 214 GVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDE 273
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
++ M+ ++K+ P+L T++ +I GL KAG A + +E+ +SG +P+ TY ++
Sbjct: 274 SMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLS 333
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
FR K E+ + M K + Y +I + ++++A Y + + G++
Sbjct: 334 GLFRTGKLNKCFELWNVMS-KNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKA 392
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D +Y LIN CK G L A +L+E E +G + D + ++ ++ GLCK G ++ A +
Sbjct: 393 DSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELI 452
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKA 355
M K N +N +++ + K++ AI+V M+ KD +Y+++++ LCKA
Sbjct: 453 HQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKA 512
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
+R A L L+ G++ ++DGL CR E
Sbjct: 513 ERFSDAYLSLKEMLEEGLKPDMITYSLLIDGL----CRGE 548
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 190/413 (46%), Gaps = 75/413 (18%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ D + NRM++ SPD+ T++S+I G ++ + + + EM+E
Sbjct: 260 IMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIES 319
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEA---------------------------NRVFQDMI 93
G+ PDV +YN+++ LF+ GK ++ N+ + I
Sbjct: 320 GLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAI 379
Query: 94 C-------GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
C L + T+ +++NGLCKN Y + ALR+ + G + Y+ ++ GL
Sbjct: 380 CYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGL 439
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK G L A +E++ MK+ +
Sbjct: 440 CKKGMLEQA-----------------------------------VELIHQMKKNRRKLNS 464
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ ++I +V+ +L+EA + +M + +VSYNT+IN CK + AYL L E
Sbjct: 465 HVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKE 524
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M ++G + D T+++LIDGLC+ + A L + +NK +L+ +N I+ L
Sbjct: 525 MLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINK-RLKPDLQMHNIIIHGLCTAQ 583
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
K+D A+ +F M V D T+++++ L KA A K+ L++G++
Sbjct: 584 KVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQ 636
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 180/405 (44%), Gaps = 24/405 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ D+ CQ + + + + + P +V + I R +CS D+
Sbjct: 29 IFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVGRIVDLMRAQRCTCSEDVAL------ 82
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA---TFNIMLNGLCKNRYTD 118
S + + PD+A +FQ+M+ D+ C +FN MLN ++
Sbjct: 83 ---------SAIKAYAKCSMPDQALNLFQNMV--DIFGCNPGIRSFNSMLNAFIESNQWR 131
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A F Q G P L TYNILIK CK + + +L + ++G P+ ++Y T++
Sbjct: 132 EAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLI 191
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GV 237
++ +E+ M +G D Y +I F++ G +A + ++++T+ V
Sbjct: 192 NALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSV 251
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+ +YN +IN CK GKL+ + + + M+K D +T + +I GL KAGN A
Sbjct: 252 YPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEK 311
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS---FTYSSMVHNLCK 354
+ M + G ++ YN ++ L + GK++ ++ M + +Y+ ++ L
Sbjct: 312 VFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLD 371
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
K++ A + G++ + +++GL +G +A +I
Sbjct: 372 NKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRI 416
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 132/283 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ + IL G D Y+S++ G + +L +++L+ +M +
Sbjct: 399 LLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKN 458
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ +NSL++ + K +EA V ++M D P ++N ++NGLCK +A
Sbjct: 459 RRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDA 518
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + G P+++TY++LI GLC+ ++ A + + + P+ + I+
Sbjct: 519 YLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHG 578
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+K + LEI + M++ D + T++ K G EA ++++ G+Q D
Sbjct: 579 LCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPD 638
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
I+SYN C ++ A L + +G + T +L+
Sbjct: 639 IISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLV 681
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 3/194 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ F Y L M E G+ PD++TY+ LI G R + +L+L + +
Sbjct: 505 IINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKR 564
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ +N ++H L K D A +F M + P T N ++ GL K AL
Sbjct: 565 LKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEAL 624
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + + G P++++YNI KGLC R+ A L + D G PNA T+ +++
Sbjct: 625 KIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAV 684
Query: 182 FRNR---KYKLGLE 192
++ +Y L E
Sbjct: 685 VDDKPLMEYALNTE 698
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 71/146 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ D + ++ + PD+ +N +I G + +L++ +M ++
Sbjct: 539 LLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQV 598
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PD+ ++N++M L++ G EA +++ ++ L P ++NI GLC +A
Sbjct: 599 NCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDA 658
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGL 146
+ G +P T+N+L++ +
Sbjct: 659 IEFLYDALDRGILPNAPTWNVLVRAV 684
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I C D I +MR+ PD+VT+N+++ G + +L + D +LE
Sbjct: 574 IIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEA 633
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
G+ PD+ SYN L + +A D + + P T+N+++ + ++
Sbjct: 634 GLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDK 688
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 194/383 (50%), Gaps = 19/383 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M+I+ C+ + +L M G +PD VTYN+L+ G + +L L EML
Sbjct: 278 MVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRN 337
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+PPDV +Y SL++ + + G + A F M L P T+ ++NG + + D A
Sbjct: 338 GLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEA 397
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R++ + + GF P +VTYN L+ G C +GR+ A +L+ + G +P+ ++Y+TI+
Sbjct: 398 YRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAG 457
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R ++ ++ + M KG + D Y ++I + RL EA D ++M+ + D
Sbjct: 458 FCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPD 517
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR---L 297
+Y +LIN YCKEG L A L DEM K+GF D T+ +LI+GL K + A+ L
Sbjct: 518 EFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLL 577
Query: 298 HLEY----MNKIGFDSNLEAYN--------CIVDRLGKDGKIDHAINVFESM----EVKD 341
L Y N I +D+ +E+ + ++ G ++ A VFESM + +
Sbjct: 578 KLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPN 637
Query: 342 SFTYSSMVHNLCKAKRLPSASKL 364
Y+ ++H C+ + A KL
Sbjct: 638 EAVYNVIIHGHCRDGNVHKAHKL 660
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 193/391 (49%), Gaps = 6/391 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ M +G+S +V +YN LI G L L +EM P+V +YN+++
Sbjct: 190 VYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYC 249
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+L + DEA ++ + M L P T+N+++NGLC+ + + + + GF P+ V
Sbjct: 250 KLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGV 309
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN L+ G CK G A + E+ +G P+ +TYT+++ + +E M
Sbjct: 310 TYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQM 369
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+G +G Y ++I F + G + EA ++M+ G IV+YN L+N +C G++
Sbjct: 370 HVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRM 429
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNC 316
E A LL ME +G D +++ +I G C+ + A +++ E + K G + Y+
Sbjct: 430 EEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEK-GVSPDAITYSS 488
Query: 317 IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++ L + +++ A ++F+ M K D FTY+S+++ CK L A L +K G
Sbjct: 489 LIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKG 548
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+++GL REAK++ K+
Sbjct: 549 FLPDTVTYNVLINGLNKQARTREAKRLLLKL 579
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 194/409 (47%), Gaps = 19/409 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I AYC+ D + +L M G+ P+++TYN +I G R + + +L EM G
Sbjct: 244 VIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKG 303
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +YN+L++ ++G +A + +M+ L P T+ ++N +CK + A+
Sbjct: 304 FAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAM 363
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F + G P VTY LI G + G + A I E+ SG P +TY ++
Sbjct: 364 EFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGH 423
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + + +L M+ KG + D Y T+IA F + L A +MV GV D
Sbjct: 424 CVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDA 483
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLE 300
++Y++LI C++ +L A L EM + D++T+T LI+G CK G++ A LH E
Sbjct: 484 ITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDE 543
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHNLCKAK 356
+ K GF + YN +++ L K + A + +F + + TY +++ + C
Sbjct: 544 MIKK-GFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIES-CSDI 601
Query: 357 RLPSASKLLLS-CLK-----------SGVRILKSAQKAVVDGLRHSGCR 393
S L+ C+K S ++ + +AV + + H CR
Sbjct: 602 EFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCR 650
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 176/343 (51%), Gaps = 5/343 (1%)
Query: 50 SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD-EANRVFQDMICGDLTPCTATFNIML 108
+L+++D G P V SYN+++ + + KP A +V+++MI ++ ++NI++
Sbjct: 151 ALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILI 210
Query: 109 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
G C + LR F ++++ +P +VTYN +I CK R+ A +L+ +G G
Sbjct: 211 RGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLE 270
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
PN +TY ++ R + + +L+ M RKG+ DG Y T++ + K+G +A
Sbjct: 271 PNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVL 330
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+M+ +G+ D+V+Y +LIN CK G L A D+M +G + T+T LI+G +
Sbjct: 331 HSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQ 390
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 344
G + A + M + GF + YN +++ G+++ AI + ME K D +
Sbjct: 391 KGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVS 450
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
YS+++ C+ + L A ++ ++ GV +++ GL
Sbjct: 451 YSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGL 493
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 182/371 (49%), Gaps = 6/371 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C + + G M P+VVTYN++I + + + LL M
Sbjct: 208 ILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLE 267
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P++ +YN +++ L ++G+ +E + V +M P T+N ++NG CK A
Sbjct: 268 GLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQA 327
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + ++G P++VTY LI +CKAG L A ++ G PN +TYT+++
Sbjct: 328 LVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLING 387
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ I M R G+ Y ++ GR++EA + M G+ D
Sbjct: 388 FSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPD 447
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
+VSY+T+I +C+ +L+ A+ + EM ++G D T++ LI GLC+ + A L
Sbjct: 448 VVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQ 507
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
E +NK Y +++ K+G ++ A+N+ + M K D+ TY+ +++ L K
Sbjct: 508 EMLNKSLLPDEF-TYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQ 566
Query: 356 KRLPSASKLLL 366
R A +LLL
Sbjct: 567 ARTREAKRLLL 577
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 168/352 (47%), Gaps = 35/352 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ +C + +L M G+SPDVV+Y+++IAG R L + + EM+E G
Sbjct: 419 LLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKG 478
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y+SL+ L + + +EA +FQ+M+ L P T+ ++NG CK + AL
Sbjct: 479 VSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEAL 538
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K GF+P+ VTYN+LI GL K R R A+ +L +L PN ITY T+++ C
Sbjct: 539 NLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESC 598
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
S ++ K +I F G + EA E M+ + +
Sbjct: 599 -------------SDIEFKSVV-------ALIKGFCMKGLMNEADQVFESMIKRNQKPNE 638
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
YN +I+ +C++G + A+ L EM GF HT+ I L KA +G E
Sbjct: 639 AVYNVIIHGHCRDGNVHKAHKLYKEMVDFGF----IPHTVTIIALVKALYSEGMD---EQ 691
Query: 302 MNKIGFD-------SNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYS 346
+N + D S+ E +V K+G ID N+ M KD F S
Sbjct: 692 LNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEM-AKDGFLPS 742
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 153/301 (50%), Gaps = 5/301 (1%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR-LRTARWIL 159
+A F++++ + + AL + + +GF+P +++YN ++ + + + + A +
Sbjct: 132 SAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVY 191
Query: 160 KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 219
+E+ SG + N +Y +++ ++GL M+R + Y TVI A+ K+
Sbjct: 192 REMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKL 251
Query: 220 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
R+ EA + M +G++ ++++YN +IN C+ G++E +L EM+++GF D T+
Sbjct: 252 KRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTY 311
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
L++G CK GN A + M + G ++ Y +++ + K G ++ A+ F+ M V
Sbjct: 312 NTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHV 371
Query: 340 K----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
+ + TY+S+++ + + A ++ ++SG A+++G SG E
Sbjct: 372 RGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEE 431
Query: 396 A 396
A
Sbjct: 432 A 432
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 15/220 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL-----DE 56
LI+ YC+ + + + M + G PD VTYN LI G + + + LL DE
Sbjct: 524 LINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDE 583
Query: 57 MLEMGIPPDVW----------SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 106
+ GI D S +L+ G +EA++VF+ MI + P A +N+
Sbjct: 584 SIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNV 643
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+++G C++ A ++++ + GF+P VT L+K L G +++++ S
Sbjct: 644 IIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSC 703
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
+A +++ + +L+ M + G+ G
Sbjct: 704 KLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLPSG 743
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 186/362 (51%), Gaps = 4/362 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + M GI PDVVT+N+L+ R + ++ +L+EM G+ PD ++ +LM
Sbjct: 75 SVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGF 134
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ G + A RV M+ + T N+++NG CK ++AL + GF P+
Sbjct: 135 VEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQ 194
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+TYN + GLC+ + A ++ + GH P+ TY ++ C +N + + IL+
Sbjct: 195 ITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQ 254
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M +G D + T+IAA RL+EA D Q+ GV D+ ++N LIN CK G
Sbjct: 255 MVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGD 314
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
A L +EM+ G D+ T+ LID LC G + A L+ M G + YN
Sbjct: 315 PHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNT 374
Query: 317 IVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
I+D L K +I+ A VF+ M++ +++ T+++++ LCK K++ A +L+ + G
Sbjct: 375 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 434
Query: 373 VR 374
++
Sbjct: 435 LQ 436
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 201/401 (50%), Gaps = 5/401 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ + + + G PD +TYN+ + G +N + +L ++D M++
Sbjct: 164 VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE 223
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV++YN +++CL + G+ +EA + M+ P TFN ++ LC + A
Sbjct: 224 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 283
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + R + G P++ T+NILI LCK G A + +E+ +SG P+ +TY T++
Sbjct: 284 LDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDN 343
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K L++L M+ G Y T+I K R++EA + +QM G+ +
Sbjct: 344 LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 403
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++NTLI+ CK+ K++ A+ L+++M +G + + T+ ++ CK G+IK A LE
Sbjct: 404 AITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 463
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M GF+ ++ Y +++ L K G+ A+ V M +K Y+ ++ +L +
Sbjct: 464 TMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRN 523
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGL-RHSGCRREA 396
+ A L + G K V GL R G +EA
Sbjct: 524 NIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEA 564
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 201/408 (49%), Gaps = 4/408 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A C+ +L M G++PD T+ +L+ G + +L + MLEMG
Sbjct: 95 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 154
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ N L++ +LG+ ++A Q I P T+N +NGLC+N + +AL
Sbjct: 155 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 214
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + + G P++ TYNI++ LCK G+L A+ IL ++ D G P+ T+ T++
Sbjct: 215 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 274
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + L++ + KG + D + + +I A K+G A E+M G D
Sbjct: 275 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 334
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTLI+ C GKL A LL +ME G T+ +IDGLCK I+ A +
Sbjct: 335 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 394
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M+ G N +N ++D L KD KID A + M + ++ TY+S++ + CK
Sbjct: 395 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD 454
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
+ A+ +L + +G + +++GL +G + A K+ +R+
Sbjct: 455 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI 502
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 185/381 (48%), Gaps = 7/381 (1%)
Query: 13 DAGYTILNRMREA-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
DA ILN+++ GI D V YN L+ S + + EM GI PDV ++N+
Sbjct: 35 DAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 94
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM L + + A + ++M + P TF ++ G + + ALR+ + + G
Sbjct: 95 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 154
Query: 132 FVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
VT N+LI G CK GR+ A +I +E+ D G P+ ITY T + +N
Sbjct: 155 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHA 213
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
L+++ M ++G+ D F Y V+ K G+L+EA + QMV G DI ++NTLI
Sbjct: 214 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 273
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
C +LE A L ++ +G D YT ILI+ LCK G+ A E M G +
Sbjct: 274 LCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPD 333
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLL 366
YN ++D L GK+ A+++ + ME + + TY++++ LCK R+ A ++
Sbjct: 334 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 393
Query: 367 SCLKSGVRILKSAQKAVVDGL 387
G+ ++DGL
Sbjct: 394 QMDLQGISRNAITFNTLIDGL 414
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 124/283 (43%), Gaps = 36/283 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+A C+ + M+ +G +PD VTYN+LI L +LDLL +M
Sbjct: 304 ILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST 363
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +YN+++ L + + +EA VF M ++ TFN +++GLCK++ D+A
Sbjct: 364 GCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDA 423
Query: 121 LRMF-----RGLQKH------------------------------GFVPELVTYNILIKG 145
+ GLQ + GF ++VTY LI G
Sbjct: 424 FELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLING 483
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCKAGR + A +L+ + G P Y +++ FR + L + M G D
Sbjct: 484 LCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPD 543
Query: 206 GFGYCTVIAAFVKIG-RLKEATDYMEQMVTDGVQLDIVSYNTL 247
Y V + G +KEA D+M +MV G + S+ L
Sbjct: 544 ALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRML 586
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 36/185 (19%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ D + ++N+M G+ P+ +TYNS++ + + + D+L+ M G
Sbjct: 410 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 469
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
DV +Y +L++ L + G+ A +V + M + P +N +L L + +AL
Sbjct: 470 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 529
Query: 122 RMFRGLQK------------------------------------HGFVPELVTYNILIKG 145
+FR + + GF+PE ++ +L +G
Sbjct: 530 SLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 589
Query: 146 LCKAG 150
L G
Sbjct: 590 LLNLG 594
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 187/372 (50%), Gaps = 6/372 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M++D + FD + + M G SP+VVTY +LI G R + L DEM+E
Sbjct: 163 MVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEK 222
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P V Y L+ L + EA +F+ M + P T+N M++G CK + A
Sbjct: 223 KIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKA 282
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +++ + G +P +VT+ ILI GLCK + +AR L ++ G PN Y ++
Sbjct: 283 LELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDG 342
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ L + S +++ D F Y +I + R++EA +++M G +
Sbjct: 343 YCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPN 402
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHL 299
V+YNTLI+ YCKEG +E A + +M ++G E + T + LIDG CKAG ++ A L+
Sbjct: 403 AVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYT 462
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKA 355
E + K G ++ AY ++D KDG A + + M+ + FT S ++ LCK
Sbjct: 463 EMVIK-GLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521
Query: 356 KRLPSASKLLLS 367
R+ A KL L+
Sbjct: 522 GRISDAIKLFLA 533
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 191/395 (48%), Gaps = 9/395 (2%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
+ +L+R+ + +P+V + LI + L+ +L + +M + P + + N ++
Sbjct: 113 FNVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVY---YKMDVLPAMQACNMVLDG 167
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
L + G+ D +V+ DM+ +P T+ +++G C+ A R+F + + P
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT 227
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
+V Y ILI+GLC R+ A + + + +SG PN TY T+M + K LE+
Sbjct: 228 VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQ 287
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M G + + +I K + A ++ M + GV +I YN LI+ YCK G
Sbjct: 288 EMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAG 347
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
L A L E+EK D +T++ILI GLC ++ A L+ M K GF N YN
Sbjct: 348 NLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYN 407
Query: 316 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++D K+G ++ AI V M K + T+S+++ CKA ++ +A L +
Sbjct: 408 TLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK 467
Query: 372 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
G+ A A++DG G +EA ++ +++ A
Sbjct: 468 GLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEA 502
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 89/212 (41%), Gaps = 11/212 (5%)
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
++ G P ++ SL+ G +A+ +F ++ +L T+ +++ N+
Sbjct: 657 VINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSKNLISWTS----VISAYVDNQR 712
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
+ AL++FR +Q P++VT + + G L WI + G + +
Sbjct: 713 PNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNS 772
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD- 235
++ N K G EI +A + + + V+ A G ++E + M D
Sbjct: 773 LI-----NMYSKCG-EIGTARRFSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDY 826
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
++ I + +++L C+ G L AY + +M
Sbjct: 827 SLRPRISHFGCMVDLLCRAGLLTEAYEFILKM 858
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 5/160 (3%)
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
+ +VI+A+V R +A QM D VQ DIV+ ++ G L+ + +
Sbjct: 700 WTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIR 759
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
+G + D + LI+ K G I A R L N + F L A C L ++GK
Sbjct: 760 HRGLDTDLCLNNSLINMYSKCGEIGTARRFSLVLPNDVTFMGVLMA--CSHAGLVEEGK- 816
Query: 328 DHAINVFESMEVKDSFT-YSSMVHNLCKAKRLPSASKLLL 366
H ++ E ++ + + MV LC+A L A + +L
Sbjct: 817 QHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFIL 856
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 212/404 (52%), Gaps = 7/404 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C+ D +L+RM++ G PDVVTYN LI L +L ++D++L+
Sbjct: 152 VISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDN 211
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y L+ G DEA ++ +M+ L P T+N+++NG+CK D A
Sbjct: 212 CKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAF 271
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ K+G V + TYNIL++ L G+ ++ ++ G PN ITY+T++
Sbjct: 272 EFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITAL 331
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ K +L MK K DG+ Y +I+A + G++ A ++++ M++ G DI
Sbjct: 332 CRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDI 391
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHLE 300
+SYN+++ CK G + A + +++ + G + ++ L L +G+ I+ + LE
Sbjct: 392 LSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILE 451
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI----NVFESMEVKDS-FTYSSMVHNLCKA 355
++ G D + YN ++ L +DG +D AI ++FES + + + +Y++++ LCK
Sbjct: 452 MLSN-GIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKV 510
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+R+ A ++L + + G ++ ++ G+ +G R +A ++
Sbjct: 511 QRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMEL 554
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 144/299 (48%), Gaps = 9/299 (3%)
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
K DE+ Q M+ P ++ G + + A+++ L+KHG P++ Y
Sbjct: 91 AKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAY 149
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM-KCCFRNRKYKLGLEILSAMK 198
N +I G CKA R+ A +L + G P+ +TY ++ C R R L L ++ +
Sbjct: 150 NAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGR-LDLALRVMDQLL 208
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
+ Y +I A + G + EA +++M++ G++ D +YN ++N CKEG L+
Sbjct: 209 KDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLD 268
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK-GARLHLEYMNKIGFDSNLEAYNCI 317
A+ L + K G T+ IL+ L G + G +L + + K G + N Y+ +
Sbjct: 269 RAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVK-GCEPNPITYSTL 327
Query: 318 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
+ L +DGKID A NV + M+ K D ++Y ++ LC+ ++ A + L + G
Sbjct: 328 ITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGG 386
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 131/268 (48%), Gaps = 5/268 (1%)
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
F LN CK+ D +L + + G+ P+++ LIKG ++ A +++
Sbjct: 78 TNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEI 137
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
L G P+ Y ++ + + ++L MK++G+ D Y +I F GR
Sbjct: 138 LEKHGK-PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGR 196
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
L A M+Q++ D + +++Y LI +G ++ A LLDEM +G D+YT+ +
Sbjct: 197 LDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNV 256
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 340
+++G+CK G + A L ++K G + + YN ++ L +GK ++ + M VK
Sbjct: 257 VVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKG 316
Query: 341 ---DSFTYSSMVHNLCKAKRLPSASKLL 365
+ TYS+++ LC+ ++ A +L
Sbjct: 317 CEPNPITYSTLITALCRDGKIDEAKNVL 344
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 111/232 (47%), Gaps = 6/232 (2%)
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T+ + C ++ KY L L M +GY D +I F + ++++A ME +
Sbjct: 83 TLNRSC-KSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKH 141
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G + D+ +YN +I+ +CK +++ A +LD M+K+GFE D T+ ILI C G + A
Sbjct: 142 G-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLA 200
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 351
++ + K + Y +++ G ID A+ + + M + D +TY+ +V+
Sbjct: 201 LRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNG 260
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+CK L A + L K+G S ++ L + G +K+ S +
Sbjct: 261 MCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDM 312
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 7/209 (3%)
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
+ Y F + + K + E+ +++ MV G + D++ LI + K+E
Sbjct: 71 QDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEK 130
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A +++ +EK G + D + + +I G CKA + A L+ M K GF+ ++ YN ++
Sbjct: 131 AIQVMEILEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIG 189
Query: 320 RLGKDGKIDHAINVFESMEVKDS-----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
G++D A+ V + + +KD+ TY+ ++ + A KLL L G+R
Sbjct: 190 NFCGRGRLDLALRVMDQL-LKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLR 248
Query: 375 ILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ VV+G+ G A + S+I
Sbjct: 249 PDRYTYNVVVNGMCKEGMLDRAFEFLSRI 277
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 185/352 (52%), Gaps = 4/352 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ D +LN+M + I DVV Y+++I + + +L+L EM G
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV++Y+SL+ CL G+ +A+R+ DM+ + P TFN +++ K A
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + + P +VTYN LI G C RL A+ I + P+ +TY T++
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +K G+E+ M R+G + Y T+I F + A +QMV+DGV +I
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YNTL++ CK GKLE A ++ + ++K E D YT+ I+ +G+CKAG ++
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS 510
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
++ G ++ AYN ++ K G + A +F M+ + DS TY++++
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 206/443 (46%), Gaps = 39/443 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ IL +M + G P +VT NSL+ G + +S ++ L+D+M+EM
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN------ 114
G PD ++ +L+H LFQ K EA + + M+ P T+ ++NGLCK
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 115 -----------------------------RYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
R+ D+AL +F + G P++ TY+ LI
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LC GR A +L ++ + PN +T+ +++ + K ++ M ++ +
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y ++I F RL EA MV+ D+V+YNTLIN +CK K+ L
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+M ++G + T+T LI G +A + A++ + M G N+ YN ++D L K+G
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
K++ A+ VFE ++ D +TY+ M +CKA ++ L S GV+ A
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524
Query: 382 AVVDGLRHSGCRREAKKIQSKIR 404
++ G G + EA + K++
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMK 547
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 166/327 (50%), Gaps = 1/327 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + + +L+ M E I+P+VVT+NSLI + L + L DEM++
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P++ +YNSL++ + DEA ++F M+ D P T+N ++NG CK + + +
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + + G V VTY LI G +A A+ + K++ G PN +TY T++
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N K + + + +++ D + Y + K G++++ D + GV+ D+
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDV 520
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YNT+I+ +CK+G E AY L +M++ G D T+ LI + G+ + ++
Sbjct: 521 IAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKE 580
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKID 328
M F + Y + D L DG++D
Sbjct: 581 MRSCRFAGDASTYGLVTDML-HDGRLD 606
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 195/411 (47%), Gaps = 4/411 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + FD + +M G+S ++ TYN +I R S LS +L +L +M+++G
Sbjct: 71 LLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLG 130
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + + NSL++ + EA + M+ P T TF +++GL ++ A+
Sbjct: 131 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 190
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P+LVTY +I GLCK G A +L ++ + + Y+T++
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R L + + M KG D F Y ++I+ GR +A+ + M+ + ++
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++N+LI+ + KEGKL A L DEM ++ + + T+ LI+G C + A+
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M ++ YN +++ K K+ + +F M V ++ TY++++H +A
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+A + + GV ++DGL +G +A + ++ +K+
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 170/368 (46%), Gaps = 4/368 (1%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
+ D + M ++ P +V ++ L++ + + ++M +G+ ++++Y
Sbjct: 44 LKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTY 103
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N +++CL + + A + M+ P T N +LNG C A+ + + +
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G+ P+ VT+ L+ GL + + A +++ + G P+ +TY ++ + + L
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
L +L+ M++ D Y TVI + K + +A + +M G++ D+ +Y++LI+
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
C G+ A LL +M ++ + T LID K G + A + M + D
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLL 365
N+ YN +++ ++D A +F M KD TY+++++ CKAK++ +L
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 366 LSCLKSGV 373
+ G+
Sbjct: 404 RDMSRRGL 411
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 96/194 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + Q D + +M G+ P+++TYN+L+ G +N L ++ + + + +
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+++YN + + + GK ++ +F + + P +N M++G CK + A
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++ G +P+ TYN LI+ + G + ++KE+ A +A TY +
Sbjct: 541 TLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600
Query: 182 FRNRKYKLGLEILS 195
R K LE+LS
Sbjct: 601 HDGRLDKGFLEVLS 614
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 133/290 (45%), Gaps = 10/290 (3%)
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
F GL G+ E ++ N L+ +L A + E+ S P+ + ++ ++ +
Sbjct: 24 FSGLSYDGY-REKLSRNALLHL-----KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAK 77
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
+K+ L + M+ G + + + Y +I + +L A + +M+ G IV+
Sbjct: 78 MKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVT 137
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
N+L+N +C ++ A L+D+M + G++ D T T L+ GL + A +E M
Sbjct: 138 LNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMV 197
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLP 359
G +L Y +++ L K G+ D A+N+ ME D YS+++ +LCK + +
Sbjct: 198 VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVD 257
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
A L G+R +++ L + G +A ++ S + KI+
Sbjct: 258 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 46/92 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ + C+ + G+ + + G+ PDV+ YN++I+G + L + L +M E
Sbjct: 490 IMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
G PD +YN+L+ + G + + ++M
Sbjct: 550 GPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 186/362 (51%), Gaps = 4/362 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + M GI PDVVT+N+L+ R + ++ +L+EM G+ PD ++ +LM
Sbjct: 167 SVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGF 226
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ G + A RV M+ + T N+++NG CK ++AL + GF P+
Sbjct: 227 VEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQ 286
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+TYN + GLC+ + A ++ + GH P+ TY ++ C +N + + IL+
Sbjct: 287 ITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQ 346
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M +G D + T+IAA RL+EA D Q+ GV D+ ++N LIN CK G
Sbjct: 347 MVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGD 406
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
A L +EM+ G D+ T+ LID LC G + A L+ M G + YN
Sbjct: 407 PHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNT 466
Query: 317 IVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
I+D L K +I+ A VF+ M++ +++ T+++++ LCK K++ A +L+ + G
Sbjct: 467 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 526
Query: 373 VR 374
++
Sbjct: 527 LQ 528
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 201/401 (50%), Gaps = 5/401 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ + + + G PD +TYN+ + G +N + +L ++D M++
Sbjct: 256 VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE 315
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV++YN +++CL + G+ +EA + M+ P TFN ++ LC + A
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + R + G P++ T+NILI LCK G A + +E+ +SG P+ +TY T++
Sbjct: 376 LDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDN 435
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K L++L M+ G Y T+I K R++EA + +QM G+ +
Sbjct: 436 LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 495
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++NTLI+ CK+ K++ A+ L+++M +G + + T+ ++ CK G+IK A LE
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 555
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M GF+ ++ Y +++ L K G+ A+ V M +K Y+ ++ +L +
Sbjct: 556 TMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRN 615
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGL-RHSGCRREA 396
+ A L + G K V GL R G +EA
Sbjct: 616 NIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEA 656
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 201/408 (49%), Gaps = 4/408 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A C+ +L M G++PD T+ +L+ G + +L + MLEMG
Sbjct: 187 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ N L++ +LG+ ++A Q I P T+N +NGLC+N + +AL
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + + G P++ TYNI++ LCK G+L A+ IL ++ D G P+ T+ T++
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + L++ + KG + D + + +I A K+G A E+M G D
Sbjct: 367 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 426
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTLI+ C GKL A LL +ME G T+ +IDGLCK I+ A +
Sbjct: 427 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M+ G N +N ++D L KD KID A + M + ++ TY+S++ + CK
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD 546
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
+ A+ +L + +G + +++GL +G + A K+ +R+
Sbjct: 547 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI 594
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 185/381 (48%), Gaps = 7/381 (1%)
Query: 13 DAGYTILNRMREA-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
DA ILN+++ GI D V YN L+ S + + EM GI PDV ++N+
Sbjct: 127 DAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 186
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM L + + A + ++M + P TF ++ G + + ALR+ + + G
Sbjct: 187 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246
Query: 132 FVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
VT N+LI G CK GR+ A +I +E+ D G P+ ITY T + +N
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHA 305
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
L+++ M ++G+ D F Y V+ K G+L+EA + QMV G DI ++NTLI
Sbjct: 306 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 365
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
C +LE A L ++ +G D YT ILI+ LCK G+ A E M G +
Sbjct: 366 LCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPD 425
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLL 366
YN ++D L GK+ A+++ + ME + + TY++++ LCK R+ A ++
Sbjct: 426 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485
Query: 367 SCLKSGVRILKSAQKAVVDGL 387
G+ ++DGL
Sbjct: 486 QMDLQGISRNAITFNTLIDGL 506
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 124/283 (43%), Gaps = 36/283 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+A C+ + M+ +G +PD VTYN+LI L +LDLL +M
Sbjct: 396 ILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST 455
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +YN+++ L + + +EA VF M ++ TFN +++GLCK++ D+A
Sbjct: 456 GCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDA 515
Query: 121 LRMF-----RGLQKH------------------------------GFVPELVTYNILIKG 145
+ GLQ + GF ++VTY LI G
Sbjct: 516 FELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLING 575
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCKAGR + A +L+ + G P Y +++ FR + L + M G D
Sbjct: 576 LCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPD 635
Query: 206 GFGYCTVIAAFVKIG-RLKEATDYMEQMVTDGVQLDIVSYNTL 247
Y V + G +KEA D+M +MV G + S+ L
Sbjct: 636 ALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRML 678
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 129/308 (41%), Gaps = 42/308 (13%)
Query: 107 MLNGLCKNRYTDNALRMFRG-LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
+L L + D ALRM L + F P Y +I+ L G L + ++ E+
Sbjct: 44 LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRRE 103
Query: 166 GH-------------------------------------APNAITYTTIMKCCFRNRKYK 188
GH + + Y ++ K K
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
L + S M +G D + T++ A + +++ A +E+M + GV D ++ TL+
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLM 223
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
+ +EG +EAA + M + G K T +LI+G CK G ++ A +++ GF+
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE 283
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
+ YN V+ L ++ + HA+ V + M + D FTY+ +V+ LCK +L A +
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343
Query: 365 LLSCLKSG 372
L + G
Sbjct: 344 LNQMVDRG 351
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 36/185 (19%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ D + ++N+M G+ P+ +TYNS++ + + + D+L+ M G
Sbjct: 502 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
DV +Y +L++ L + G+ A +V + M + P +N +L L + +AL
Sbjct: 562 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 621
Query: 122 RMFRGLQK------------------------------------HGFVPELVTYNILIKG 145
+FR + + GF+PE ++ +L +G
Sbjct: 622 SLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681
Query: 146 LCKAG 150
L G
Sbjct: 682 LLNLG 686
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 210/443 (47%), Gaps = 39/443 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ +L +M + G P++VT +SL+ G + +S ++ L+D+M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ ++N+L+H LF K EA + M+ P T+ +++NGLCK TD A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ P ++ Y +I GLCK + A + KE+ G PN +TY++++ C
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL- 239
++ +LS M + D F + +I AFVK G+L EA ++MV +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 240 ----------------------------------DIVSYNTLINLYCKEGKLEAAYLLLD 265
D+VSY+TLI +CK +++ L
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFR 420
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM ++G + T+T LI GL +AG+ A+ + M G N+ YN ++D L K+G
Sbjct: 421 EMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 326 KIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
K++ A+ VFE ++ +TY+ M+ +CKA ++ L + GV+ A
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Query: 382 AVVDGLRHSGCRREAKKIQSKIR 404
++ G G + EA + +++
Sbjct: 541 TMISGFCRKGSKEEADALFKEMK 563
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 190/356 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++ C+ D + +LN+M + + P V+ Y ++I G +N + +L+L EM
Sbjct: 226 VVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETK 285
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+V +Y+SL+ CL G+ +A+R+ DMI + P TF+ +++ K A
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + K P +VTY+ LI G C RL A+ + + + P+ ++Y+T++K
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKG 405
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ G+E+ M ++G + Y T+I + G A + ++MV+DGV +
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++YNTL++ CK GKLE A ++ + +++ E YT+ I+I+G+CKAG ++
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAK 356
++ G ++ AYN ++ + G + A +F+ M+ + S + L +A+
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 581
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 170/337 (50%), Gaps = 2/337 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ D + M GI P+VVTY+SLI+ S + LL +M+E
Sbjct: 262 IIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV+++++L+ + GK EA +++ +M+ + P T++ ++NG C + D A
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 122 RMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+MF + KH F P++V+Y+ LIKG CKA R+ + +E+ G N +TYTT+++
Sbjct: 382 QMFEFMVSKHCF-PDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQG 440
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+ + EI M G + Y T++ K G+L++A E + ++
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I +YN +I CK GK+E + L + +G + D + +I G C+ G+ + A +
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M + G N YN ++ +DG + + + + M
Sbjct: 561 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 166/330 (50%), Gaps = 1/330 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + + +L+ M E I+PDV T+++LI + L + L DEM++
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P + +Y+SL++ + DEA ++F+ M+ P +++ ++ G CK + D +
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGM 416
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + + G V VTY LI+GL +AG A+ I KE+ G PN +TY T++
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N K + + + ++R + Y +I K G++++ D + GV+ D+
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNT+I+ +C++G E A L EM++ G + + LI + G+ + + ++
Sbjct: 537 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 596
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
M GF + + + L DG++D +
Sbjct: 597 MRSCGFAGDASTIGLVTNML-HDGRLDKSF 625
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 177/386 (45%), Gaps = 4/386 (1%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
+ D + M ++ P ++ ++ L++ + + + L ++M +G+P + ++Y
Sbjct: 60 LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTY 119
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
+ L++C + + A V M+ P T + +LNG C ++ A+ + +
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G+ P VT+N LI GL + A ++ + G P+ +TY ++ + L
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+L+ M++ Y T+I K + +A + ++M T G++ ++V+Y++LI+
Sbjct: 240 AFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
C G+ A LL +M ++ D +T + LID K G + A + M K D
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
++ Y+ +++ ++D A +FE M K D +YS+++ CKAKR+ +L
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELF 419
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSG 391
+ G+ ++ GL +G
Sbjct: 420 REMSQRGLVGNTVTYTTLIQGLFQAG 445
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 150/323 (46%), Gaps = 4/323 (1%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K D+A +F +M+ P F+ +L+ + K D + + +Q G TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
ILI C+ +L A +L ++ G+ PN +T ++++ +++ + ++ M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
GY + + T+I + EA +++MV G Q D+V+Y ++N CK G + A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
++LL++ME+ E +T +IDGLCK ++ A + M G N+ Y+ ++
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
L G+ A + M + D FT+S+++ K +L A KL +K +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 377 KSAQKAVVDGLRHSGCRREAKKI 399
++++G EAK++
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQM 383
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 132/301 (43%), Gaps = 32/301 (10%)
Query: 109 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
NGL + + D+A+ +F + K P ++ ++ L+ + K + + +++ + G
Sbjct: 55 NGLSELKL-DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMP 113
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
N TY+ ++ C R + L L +L M + GY + +++ + R+ EA
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
++QM G Q + V++NTLI+ K A L+D M +G + D T+ ++++GLCK
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSM 348
G+ A + L M + GK++ + Y+++
Sbjct: 234 RGDTDLAFILLNKMEQ--------------------GKLEPGV-----------LIYTTI 262
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+ LCK K + A L G+R +++ L + G +A ++ S + KI
Sbjct: 263 IDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 409 S 409
+
Sbjct: 323 N 323
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 93/194 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI Q D I M G+ P+++TYN+L+ G +N L ++ + + +
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P +++YN ++ + + GK ++ +F ++ + P +N M++G C+ + A
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ +++ G +P YN LI+ + G + ++KE+ G A +A T +
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616
Query: 182 FRNRKYKLGLEILS 195
R K L++LS
Sbjct: 617 HDGRLDKSFLDMLS 630
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 4/122 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ + G+ + + G+ PDVV YN++I+G R + L EM E
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM----ICGDLTPCTATFNIMLNGLCKNRY 116
G P+ YN+L+ + G + + + ++M GD + N++ +G +
Sbjct: 566 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSF 625
Query: 117 TD 118
D
Sbjct: 626 LD 627
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 201/407 (49%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+AYC+ FD +L MRE G + VTYN LIAG R+ + + +M + G
Sbjct: 123 LIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG 182
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD ++Y +L++ L + + +EA + +M C +L P + +++G + D A
Sbjct: 183 LVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 242
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+M + + G P +TY+ L++GLCK G++ A +LK++ H P+ ITY I++
Sbjct: 243 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGH 302
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
FR+ K +LS M+ G + + + Y +I + G ++A+D +E+M T G++ +
Sbjct: 303 FRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 362
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
Y LI+ YC+EG + A + D+M K D Y + LI GL K G ++ + +
Sbjct: 363 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 422
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
M + G N Y+ ++ K+G ++ A + + M + Y ++ + K+
Sbjct: 423 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 482
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ S S L GV + ++ L SG A ++ S+I
Sbjct: 483 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIE 529
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 189/376 (50%), Gaps = 4/376 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ D +L +M PD +TYN +I G R+ + LL EM G
Sbjct: 263 LVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAG 322
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V++Y+ ++H L Q G+P++A+ + ++M L P + +++G C+ A
Sbjct: 323 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLAC 382
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + K +P+L YN LI GL K GR+ + ++ + G PN TY+ ++
Sbjct: 383 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 442
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N + +++ M G + Y ++ ++ K +++ + + M+ GV LD
Sbjct: 443 LKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDN 502
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
Y LI+ G +EAA+ +L E+EK G D + ++ LI GLCK + + A L+
Sbjct: 503 RIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDE 562
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M+K G D N+ YN ++D L K G I +A NVF S+ K + TY+S++ CK
Sbjct: 563 MSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGD 622
Query: 358 LPSASKLLLSCLKSGV 373
+ +A L L +G+
Sbjct: 623 ISNAFYLYNEMLATGI 638
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 194/406 (47%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ + +L+ M A + P+VV Y +LI G R + ++ EM+ G
Sbjct: 193 LINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAG 252
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +Y++L+ L ++G+ D A+ + + M+ P T T+N+++ G ++ +A
Sbjct: 253 VQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAF 312
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ ++ G P + TY+I+I GLC++G A +L+E+ G PNA Y ++
Sbjct: 313 RLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGY 372
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R L EI M + D + Y ++I K+GR++E+T Y QM G+ +
Sbjct: 373 CREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNE 432
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y+ LI+ Y K G LE+A L+ M G + + + L++ K+ +I+ +
Sbjct: 433 FTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKS 492
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G + Y ++ L G ++ A V +E V D YSS++ LCK
Sbjct: 493 MLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTAD 552
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A +L K GV A++DGL SG A+ + + I
Sbjct: 553 REKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 598
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 198/407 (48%), Gaps = 4/407 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D Y + ++ MR+ G++P + N+L+ R ++ + + M+
Sbjct: 52 VLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGA 111
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PDV++Y++L+ ++ + D A +V +M T T+N+++ GLC++ + A
Sbjct: 112 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 171
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++ +G VP+ TY LI GLCK+ R A+ +L E+ + PN + Y ++
Sbjct: 172 FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDG 231
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R +++ M G + Y ++ K+G++ A+ ++QMV D + D
Sbjct: 232 FMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD 291
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++YN +I + + + A+ LL EME G + YT++I+I GLC++G + A LE
Sbjct: 292 TITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 351
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M G N Y ++ ++G + A +F+ M + D + Y+S++ L K
Sbjct: 352 EMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVG 411
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
R+ ++K + G+ + ++ G +G A+++ ++
Sbjct: 412 RVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 458
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 155/343 (45%), Gaps = 5/343 (1%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
+M+E G+ P+ TY+ LI G +N L + L+ ML+ G+ P+ Y L+ F+
Sbjct: 422 QMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSD 481
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
++ + F+ M+ + + I+++ L + + A R+ ++K+G VP++ Y+
Sbjct: 482 DIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYS 541
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
LI GLCK A IL E+ G PN + Y ++ ++ + +++ K
Sbjct: 542 SLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK 601
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G + Y ++I K+G + A +M+ G+ D Y+ L G LE A
Sbjct: 602 GLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQA 661
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
L++EM +G + L+DG CK G ++ L + G N I+
Sbjct: 662 MFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISG 720
Query: 321 LGKDGKIDHAINVFESMEVKDSFT----YSSMVHNLCKAKRLP 359
L + GK+ +F ++ K S + +SS+ ++ ++P
Sbjct: 721 LSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP 763
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 163/390 (41%), Gaps = 54/390 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI Y + ++ ++ RM + G+ P+ V Y L+ ++ + ML+ G
Sbjct: 438 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 497
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D Y L+H L G + A RV ++ P ++ +++GLCK + A
Sbjct: 498 VMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAF 557
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K G P +V YN LI GLCK+G + AR + + G PN +TYT+++
Sbjct: 558 GILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGS 617
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + M G T D F Y + G L++A +E+M G I
Sbjct: 618 CKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASI 676
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK-------- 293
S+N L++ +CK GK++ LL + +G + T +I GL +AG +
Sbjct: 677 SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVE 736
Query: 294 --------GAR----LHLEYMN--KIGFD------------SNLE--------------- 312
AR L ++ +N KI D NL+
Sbjct: 737 LQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAP 796
Query: 313 ----AYNCIVDRLGKDGKIDHAINVFESME 338
+Y IVD L + GK+ A+N+ + M+
Sbjct: 797 MGCSSYLAIVDNLCRKGKLSEALNLLKEMD 826
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 150/316 (47%), Gaps = 23/316 (7%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
+ +A + +L+ + + G PDV Y+SLI+G + + + +LDEM + G+ P++ YN
Sbjct: 517 NMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYN 576
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+L+ L + G A VF ++ L P T+ +++G CK NA ++ +
Sbjct: 577 ALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLAT 636
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G P+ Y++L G AG L A ++++E+ GHA + + C R K +
Sbjct: 637 GITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRG-KMQET 695
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA-TDYME------------------Q 231
L++L + +G + +I+ + G+L E T ++E
Sbjct: 696 LKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMD 755
Query: 232 MVTDG-VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
M+ G + LD+V + +I +CKEG L+ A +L D + + ++ ++D LC+ G
Sbjct: 756 MINQGKIPLDVV--DDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKG 813
Query: 291 NIKGARLHLEYMNKIG 306
+ A L+ M+K G
Sbjct: 814 KLSEALNLLKEMDKRG 829
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 131/275 (47%), Gaps = 6/275 (2%)
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
++L+ K+GR++ A ++ + D G AP+ ++K R L ++ M
Sbjct: 51 DVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVG 110
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
G + D + Y T+I A+ K+ A + +M G L+ V+YN LI C+ G +E
Sbjct: 111 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 170
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A+ +ME G D +T+ LI+GLCK+ A+ L+ M+ N+ Y ++D
Sbjct: 171 AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLID 230
Query: 320 RLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
++G D A + + M + TY ++V LCK ++ AS LL ++ R
Sbjct: 231 GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 290
Query: 376 LKSAQKAVVDG-LRHSGCRREAKKIQSKIRMAKIS 409
+++G RH +++A ++ S++ A IS
Sbjct: 291 DTITYNLIIEGHFRHHN-KKDAFRLLSEMENAGIS 324
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 18/270 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ + N + G+ P+ VTY SLI G+ + +S + L +EML G
Sbjct: 578 LIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATG 637
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD + Y+ L G ++A + ++M ++FN +++G CK L
Sbjct: 638 ITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETL 696
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + G VP +T +I GL +AG+L I EL A ++++
Sbjct: 697 KLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDM 756
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K+ L+++ M R +C K G L +A + +V +
Sbjct: 757 I--NQGKIPLDVVDDMIRD--------HC-------KEGNLDKALMLRDVIVAKSAPMGC 799
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
SY +++ C++GKL A LL EM+K+G
Sbjct: 800 SSYLAIVDNLCRKGKLSEALNLLKEMDKRG 829
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 135/313 (43%), Gaps = 41/313 (13%)
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
A +++++ K+ +A + ++ G P + N L+K L +A + W ++E
Sbjct: 48 AVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAM-ALLWKVRE 106
Query: 162 -LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
+ +G +P+ TY+T+++ + R++ ++L M+ +G + Y +IA + G
Sbjct: 107 FMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSG 166
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK--------------------------- 253
++EA + + M G+ D +Y LIN CK
Sbjct: 167 AVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYA 226
Query: 254 --------EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
EG + A+ ++ EM G + +K T+ L+ GLCK G + A L L+ M +
Sbjct: 227 NLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRD 286
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 361
+ YN I++ + A + ME + +TYS M+H LC++ A
Sbjct: 287 SHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKA 346
Query: 362 SKLLLSCLKSGVR 374
S LL G++
Sbjct: 347 SDLLEEMTTKGLK 359
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 92/254 (36%), Gaps = 57/254 (22%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ + + N M GI+PD Y+ L G + L ++ L++EM G
Sbjct: 613 LIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 672
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC--------- 112
+ S+N+L+ + GK E ++ ++ L P T +++GL
Sbjct: 673 -HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVH 731
Query: 113 ------KNRYTDNALRMFRGL----QKHGFVPELV------------------------- 137
+ + +++A R F L G +P V
Sbjct: 732 TIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIV 791
Query: 138 ---------TYNILIKGLCKAGRLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKY 187
+Y ++ LC+ G+L A +LKE+ G+ P + I FR +
Sbjct: 792 AKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVALLGIF--WFRRHHH 849
Query: 188 KLGLEILSAMKRKG 201
L + R G
Sbjct: 850 ILNKSVTKMATRFG 863
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 202/399 (50%), Gaps = 4/399 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ YC ++++M E G PD VT+N+LI G ++ S ++ L+D+M++ G
Sbjct: 156 LLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRG 215
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ +Y ++++ L + G D A + + M G + +N +++GLCK ++ D+A
Sbjct: 216 CQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAF 275
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ G P++ TYN LI LC GR A +L + + PN +T++ ++
Sbjct: 276 ALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAF 335
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K ++ M ++ D F Y ++I F RL EA E M++ ++
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 395
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTLI +CK ++E L EM ++G + T+ LI GL +AG+ A+ +
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G ++ Y+ ++D L K GK++ A+ VFE ++ D +TY+ M+ +CKA +
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ L S GV+ ++ G G + EA
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 184/355 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ D ++L +M + I DVV YN++I G + + + L ++M G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKG 285
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV++YNSL+ CL G+ +A+R+ +MI + P TF+ +++ K A
Sbjct: 286 IRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + K P++ TY+ LI G C RL A+ + + + PN +TY T++K
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ + G+E+ M ++G + Y T+I + G A ++MV+DGV DI
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y+ L++ CK GKLE A ++ + ++K E D YT+ I+I+G+CKAG ++
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAK 356
++ G N+ Y ++ + G + A +F M+ + S + L +A+
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRAR 580
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 178/370 (48%), Gaps = 5/370 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C++ D + + N+M GI PDV TYNSLI+ S + LL M+E
Sbjct: 261 IIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERK 320
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V ++++L+ + GK EA +++ +MI + P T++ ++NG C + D A
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
MF + P +VTYN LIKG CKA R+ + +E+ G N +TY T+++
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ + +I M G D Y ++ K G+L++A E + ++ DI
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN +I CK GK+E + L + +G + + +T +I G C+ G + A
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M + G + YN ++ +DG + + + M V D+ T SMV N+ R
Sbjct: 561 MKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI-SMVINMLHDGR 619
Query: 358 LPSASKLLLS 367
L + +LS
Sbjct: 620 LEKSYLEMLS 629
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 190/390 (48%), Gaps = 4/390 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + FD ++ RM+ IS D+ +YN LI R S L +L +L +M+++G
Sbjct: 86 LLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLG 145
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ + +SL++ + +A + M+ P T TFN +++GL + A+
Sbjct: 146 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAV 205
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P+LVTY ++ GLCK G + A +LK++ + + Y TI+
Sbjct: 206 ALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 265
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + + M+ KG D F Y ++I+ GR +A+ + M+ + ++
Sbjct: 266 CKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNV 325
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+++ LI+ + KEGKL A L DEM K+ + D +T++ LI+G C + A+ E
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M N+ YN ++ K +++ + +F M V ++ TY++++ L +A
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
A K+ + GV ++DGL
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 182/398 (45%), Gaps = 4/398 (1%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
+ D + M ++ P +V +N L++ + + L + M + I D++SY
Sbjct: 59 LKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSY 118
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N L++C + + A V M+ P T + +LNG C ++ +A+ + + +
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 178
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G+ P+ VT+N LI GL + A ++ ++ G P+ +TY ++ + L
Sbjct: 179 MGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDL 238
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
L +L M++ D Y T+I K + +A +M T G++ D+ +YN+LI+
Sbjct: 239 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLIS 298
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
C G+ A LL M ++ + T + LID K G + A + M K D
Sbjct: 299 CLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLL 365
++ Y+ +++ ++D A ++FE M KD F TY++++ CKAKR+ +L
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ G+ ++ GL +G A+KI K+
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 124/263 (47%), Gaps = 4/263 (1%)
Query: 151 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
+L A + E+ S P+ + + ++ + +K+ L + + M+ ++D + Y
Sbjct: 60 KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
+I F + +L A + +M+ G + DIV+ ++L+N YC ++ A L+D+M +
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
G++ D T LI GL A ++ M + G +L Y +V+ L K G ID A
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239
Query: 331 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+++ + ME D Y++++ LCK K + A L G+R +++
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISC 299
Query: 387 LRHSGCRREAKKIQSKIRMAKIS 409
L + G +A ++ S + KI+
Sbjct: 300 LCNYGRWSDASRLLSNMIERKIN 322
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C++ + + ++++ + PD+ TYN +I G + + DL +
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V Y +++ + G +EA+ +F++M P + +N ++ ++ +
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAAS 589
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 155
+ + ++ GFV + T +++I L GRL +
Sbjct: 590 AELIKEMRSCGFVGDASTISMVINML-HDGRLEKS 623
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ + G+ + + G+ P+V+ Y ++I+G R L + L EM E
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM----ICGDLTPCTATFNIMLNGLCKNRY 116
G PD YN+L+ + G + + ++M GD + + N++ +G + Y
Sbjct: 565 GTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSY 624
Query: 117 TD 118
+
Sbjct: 625 LE 626
>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 743
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 200/409 (48%), Gaps = 10/409 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ YC+ S + I+ M++ I PD+ TYN LI G + L+L+D M +
Sbjct: 281 LVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLK 340
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +YN+L+ F+LG EA ++ + M + P T NI L LCK +
Sbjct: 341 LQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVT 400
Query: 122 RMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R + L + HGF P++VTY+ LIK K G L A +++E+G G N IT TI+
Sbjct: 401 RKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDA 460
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ RK +L + ++GY D Y T+I + + ++++A + ++M +
Sbjct: 461 LCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPT 520
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ ++N+LI C GK E A DE+ + G D T +I G CK G ++ A E
Sbjct: 521 VTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKA---FE 577
Query: 301 YMN---KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---DSFTYSSMVHNLCK 354
+ N K F + N +++ L K+G + A+N F ++ + D+ TY++M+ CK
Sbjct: 578 FYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREVDTVTYNTMISAFCK 637
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
K+L A LL + + + +++ L G EA ++ K
Sbjct: 638 DKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKF 686
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 207/402 (51%), Gaps = 6/402 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
+L++ YC + +L RM E ++PD VTYN+++ ++ LS DLL +M
Sbjct: 209 VLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKR 268
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G+ P+ +YN+L++ +LG EA ++ + M ++ P T+NI++NG+C
Sbjct: 269 NGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIRE 328
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
L + ++ P++VTYN LI G + G A+ +++++ + G PN +T+ +K
Sbjct: 329 GLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLK 388
Query: 180 -CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
C ++ ++ ++ ++ G++ D Y T+I A++K+G L A + M +M G++
Sbjct: 389 WLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIK 448
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
++ ++ NT+++ CKE K++ A+ LLD K+G+ D+ T+ LI G + ++ A
Sbjct: 449 MNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEM 508
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCK 354
+ M +I + +N ++ L GK + A+ F ES + D T++S++ CK
Sbjct: 509 WDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCK 568
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
R+ A + +K + +++GL G +A
Sbjct: 569 EGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKA 610
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 164/365 (44%), Gaps = 15/365 (4%)
Query: 36 SLIAGATRNSLLSCSL--DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
SL+ R S S SL LL L + PP ++ + GKP A +VFQ MI
Sbjct: 99 SLLVSYIRTSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHAGKPHVALQVFQKMI 158
Query: 94 CGDLTPCTATFNIMLNGLCKNRYTD-----NALRMFRGLQKHGFVPELVTYNILIKGLCK 148
L P T N +L GL RY +A +F + K G ++ T+N+L+ G C
Sbjct: 159 RLKLKPNLLTCNTLLIGLV--RYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCL 216
Query: 149 AGRLRTARWILKELGDSGHA-PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
G+L A +L+ + + P+ +TY TI+K + + ++L MKR G +
Sbjct: 217 EGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRV 276
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y ++ + K+G LKEA +E M + D+ +YN LIN C G + L+D M
Sbjct: 277 TYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVM 336
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
+ + D T+ LIDG + G A+ +E M G N +N + L K+ K
Sbjct: 337 KSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKR 396
Query: 328 DHAI-NVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+ V E +E+ D TY +++ K L A +++ + G+++
Sbjct: 397 EEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNT 456
Query: 383 VVDGL 387
++D L
Sbjct: 457 ILDAL 461
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 120/257 (46%), Gaps = 13/257 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI Y + + + + + M+ I+P V T+NSLI G + +++ DE+ E G
Sbjct: 492 LIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESG 551
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD ++NS++ + G+ ++A + + I P T NI+LNGLCK T+ AL
Sbjct: 552 LLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F L V + VTYN +I CK +L+ A +L E+ + P+ TY +I+
Sbjct: 612 NFFNTLITEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSL 670
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K E+L K FG + + L+ + + ++ +
Sbjct: 671 MEDGKLSEADELLKKFSGK------FG------SMKRNLHLETEKNPATSESKEELKTEA 718
Query: 242 VSYNTLINLYCKEGKLE 258
++Y+ +IN C G+L+
Sbjct: 719 IAYSDVINELCSRGRLK 735
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 9/187 (4%)
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ-GFECDKYTHTILI 283
A + + MV GV LD+ ++N L+N YC EGKLE A +L+ M + D T+ ++
Sbjct: 188 AREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTIL 247
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----V 339
+ K G + + L M + G N YN +V K G + A + E M+ +
Sbjct: 248 KAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNIL 307
Query: 340 KDSFTYSSMVHNLCKAKRLPSASKLL--LSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
D TY+ +++ +C A + +L+ + LK ++ ++DG G EAK
Sbjct: 308 PDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVV--TYNTLIDGCFELGLSLEAK 365
Query: 398 KIQSKIR 404
K+ ++
Sbjct: 366 KLMEQME 372
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 81/173 (46%), Gaps = 8/173 (4%)
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK---AGNIKGARLHLE 300
++ ++ Y GK A + +M + + + T L+ GL + + +I AR +
Sbjct: 134 FDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFD 193
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-----DSFTYSSMVHNLCKA 355
M KIG +++ +N +V+ +GK++ A+ + E M + D+ TY++++ + K
Sbjct: 194 DMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKK 253
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
RL LLL ++G+ + +V G G +EA +I ++ I
Sbjct: 254 GRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNI 306
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 202/427 (47%), Gaps = 40/427 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI A C+ +L M G+ PD T+ +++ G L +L + ++M+E
Sbjct: 194 VLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEF 253
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD-LTPCTATFNIMLNGLCKNRYTDN 119
G S N ++H + G+ ++A Q+M D P TFN ++NGLCK + +
Sbjct: 254 GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKH 313
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+ + + + G+ P++ TYN +I GLCK G ++ A +L ++ +PN +TY T++
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIS 373
Query: 180 ---------------------------CCFRN--------RKYKLGLEILSAMKRKGYTF 204
C F + R +++ +E+ M+ KG
Sbjct: 374 TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP 433
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D F Y +I + G+L EA + ++QM G +++YNTLI+ +CK K A +
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIF 493
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
DEME G + T+ LIDGLCK+ ++ A ++ M G + YN ++ +
Sbjct: 494 DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRG 553
Query: 325 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
G I A ++ ++M D TY +++ LCKA R+ ASKLL S G+ + A
Sbjct: 554 GDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAY 613
Query: 381 KAVVDGL 387
V+ GL
Sbjct: 614 NPVIQGL 620
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 192/375 (51%), Gaps = 5/375 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
+++ +C+ + + M + G PD T+N+L+ G + + +++++D ML+
Sbjct: 264 VIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ 323
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G PDV++YNS++ L +LG+ EA V MI D +P T T+N +++ LCK +
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + R L G +P++ T+N LI+GLC R A + +E+ G P+ TY ++
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
K L +L M+ G Y T+I F K + +EA + ++M GV
Sbjct: 444 SLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSR 503
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ V+YNTLI+ CK ++E A L+D+M +G + DKYT+ L+ C+ G+IK A +
Sbjct: 504 NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIV 563
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ M G + ++ Y ++ L K G+++ A + S+++K Y+ ++ L +
Sbjct: 564 QAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRK 623
Query: 356 KRLPSASKLLLSCLK 370
++ A L L+
Sbjct: 624 RKTTEAINLFREMLE 638
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 193/436 (44%), Gaps = 41/436 (9%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-EMGIPPDVWSY 69
SFD IL M+ + T+ LI + L L ++D M+ E G+ PD Y
Sbjct: 98 SFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFY 157
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N +++ L M + P +TFN+++ LC+ A+ M +
Sbjct: 158 NRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPS 217
Query: 130 HGFVPELVTY-----------------------------------NILIKGLCKAGRLRT 154
+G VP+ T+ N+++ G CK GR+
Sbjct: 218 YGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVED 277
Query: 155 ARWILKELGDS-GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
A ++E+ + G P+ T+ T++ + K +EI+ M ++GY D + Y +VI
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ K+G +KEA + ++QM+T + V+YNTLI+ CKE ++E A L + +G
Sbjct: 338 SGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
D T LI GLC N + A E M G + + YN ++D L GK+D A+N+
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 334 FESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
+ ME+ + TY++++ CKA + A ++ GV ++DGL
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Query: 390 SGCRREAKKIQSKIRM 405
S +A ++ ++ M
Sbjct: 518 SRRVEDAAQLMDQMIM 533
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 140/292 (47%), Gaps = 5/292 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGA--TRNSLLSCSLDLLDEMLE 59
LI C+ + + + GI PDV T+NSLI G TRN +++L +EM
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH--RVAMELFEEMRS 428
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G PD ++YN L+ L GK DEA + + M T+N +++G CK T
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTRE 488
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +F ++ HG VTYN LI GLCK+ R+ A ++ ++ G P+ TY +++
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT 548
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
R K +I+ AM G D Y T+I+ K GR++ A+ + + G+ L
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL 608
Query: 240 DIVSYNTLIN-LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+YN +I L+ K EA L + +E+ D ++ I+ GLC G
Sbjct: 609 TPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 166/347 (47%), Gaps = 6/347 (1%)
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
P+ Y ++ L + G D+ ++ +DM T+TF I++ + D L +
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 124 FRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ + G P+ YN ++ L L+ ++ G P+ T+ ++K
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
R + + + +L M G D + TV+ +++ G L A EQMV G V
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQ-GFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
S N +++ +CKEG++E A + EM Q GF D+YT L++GLCKAG++K A ++
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKR 357
M + G+D ++ YN ++ L K G++ A+ V + M +D + TY++++ LCK +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A++L G+ +++ GL + R A ++ ++R
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 142/306 (46%), Gaps = 19/306 (6%)
Query: 107 MLNGLCKNRYTDNALRMFR-GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
+L+ L ALR+F +K F PE Y ++ L ++G + IL+++ S
Sbjct: 53 LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG-------YCTVIAAFVK 218
T+ +++ +++L EILS + + D FG Y ++ V
Sbjct: 113 RCEMGTSTFLILIESY---AQFELQDEILSVVD---WMIDEFGLKPDTHFYNRMLNLLVD 166
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
LK +M G++ D+ ++N LI C+ +L A L+L++M G D+ T
Sbjct: 167 GNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT 226
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
T ++ G + G++ GA E M + G + + N IV K+G+++ A+N + M
Sbjct: 227 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMS 286
Query: 339 VKDSF-----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 393
+D F T++++V+ LCKA + A +++ L+ G +V+ GL G
Sbjct: 287 NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346
Query: 394 REAKKI 399
+EA ++
Sbjct: 347 KEAVEV 352
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 211/408 (51%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C +L M + G+ P+ +TYN+LI G R + + + DEM+
Sbjct: 290 ILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVAC 349
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI ++ +N+L++ + + GK ++A + Q+M+ + P + T+++++ G C+ + A
Sbjct: 350 GIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARA 409
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++K P ++TY+++I GLC+ G L+ IL+E+ +G PNA+ YTT+M
Sbjct: 410 FELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTA 469
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + IL M+ +G D F Y ++I F K R++EA Y+ +M+ ++ +
Sbjct: 470 HAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPN 529
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y I+ Y K G++E A +EM G + +T LI+G CK GN+ A
Sbjct: 530 AHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFR 589
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
++ +++ Y+ ++ L ++GK+ A +F ++ K ++FTY+S++ CK
Sbjct: 590 FILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQG 649
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ AS+LL G+ ++DGL +G AK + I
Sbjct: 650 NVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIE 697
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 196/395 (49%), Gaps = 4/395 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
ML+D+Y + + + P +++ NSL+ + + + + D M
Sbjct: 150 MLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAH 209
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PDV++Y +++ ++G +A RV +M +P T+N+++ GLC+ R D A
Sbjct: 210 KVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEA 269
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + R + G VP+L TY+ILI G C R R A+ +L E+ D G P ITY ++
Sbjct: 270 IELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDG 329
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + I M G + + T++ K G++++A + M++M+ GV+ D
Sbjct: 330 FMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPD 389
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y+ LI +C+ + A+ LLDEM+K+ T++++I+GLC+ GN++G L
Sbjct: 390 SQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILR 449
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M G N Y ++ K+G+++ + + E M + D F Y+S++ CKAK
Sbjct: 450 EMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAK 509
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
R+ A L+ L+ +R A +DG +G
Sbjct: 510 RMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAG 544
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 205/409 (50%), Gaps = 8/409 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I A+C+ + +L M E G SP++VTYN +I G R LL +++L M++ G
Sbjct: 221 MISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKG 280
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+++Y+ L++ + EA + +MI L P T+N +++G + + A
Sbjct: 281 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAF 340
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + G L+ +N L+ G+CKAG++ A I++E+ + G P++ TY+ +++
Sbjct: 341 RIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGH 400
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + E+L MK++ Y +I + G L+ + +MV +G++ +
Sbjct: 401 CRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNA 460
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V Y TL+ + KEG++E + ++L+ M +QG D + + LI G CKA ++ AR +L
Sbjct: 461 VVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLME 520
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
M + N Y +D K G+++ A F M + + Y++++ CK
Sbjct: 521 MLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGN 580
Query: 358 LPSASKLLLSCLKSGVRILKSAQ--KAVVDGLRHSGCRREAKKIQSKIR 404
+ A + L R+L+ Q ++ GL +G EA I S+++
Sbjct: 581 VTEAFSVFRFILSR--RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQ 627
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 203/420 (48%), Gaps = 18/420 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C+ + +++ + + DV TY+ LI G +RN + + + E+ E G
Sbjct: 571 LIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG 630
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ ++YNSL+ + G D+A+++ ++M + P T+NI+++GLCK + A
Sbjct: 631 LLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAK 690
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ G P VTY ++ G CK+ A +L+E+ G P+A Y I+ C
Sbjct: 691 NLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFC 750
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K++ L++ M KG+ + T+I + K G+L+EA +E+M+ +
Sbjct: 751 CKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNH 809
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y +LI+ CK G + A L EM+++ T+T L+ G GN+ E
Sbjct: 810 VTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEE 869
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----------TYSSMVHN 351
M G + + Y ++D ++G NV E+ ++KD Y +++
Sbjct: 870 MVAKGIEPDKMTYYVMIDAYCREG------NVMEACKLKDEILVKGMPMSVAAYDALIQA 923
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI-QSKIRMAKISH 410
LCK + KLL +SG R+ + G + +G EA ++ +S ++ +S+
Sbjct: 924 LCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSN 983
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 192/402 (47%), Gaps = 5/402 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A+ + + IL RMRE GI PDV YNSLI G + + + L EMLE
Sbjct: 466 LMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR 525
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +Y + + + G+ + A+R F +M+ + P + ++ G CK A
Sbjct: 526 LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAF 585
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + + ++ TY++LI GL + G++ A I EL + G PNA TY +++
Sbjct: 586 SVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGS 645
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++L M KG D Y +I K G ++ A + + + G+ +
Sbjct: 646 CKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNC 705
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y +++ YCK AA+ LL+EM +G D + + ++++ CK + A +
Sbjct: 706 VTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQE 765
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
M + GF S + ++N +++ K GK+ A ++ E M + + TY+S++ + CKA
Sbjct: 766 MLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGM 824
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ A +L L + V +++ G + G E +
Sbjct: 825 MGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSAL 866
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 162/337 (48%), Gaps = 1/337 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ + + + + G++P+ VTY +++ G ++ + + LL+EML
Sbjct: 675 ILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLR 734
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+PPD + YN +++ + K ++A +FQ+M+ T +FN ++ G CK+ A
Sbjct: 735 GVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEA 793
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + F+P VTY LI CKAG + A+ + E+ + P A TYT+++
Sbjct: 794 NHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHG 853
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ M KG D Y +I A+ + G + EA ++++ G+ +
Sbjct: 854 YHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMS 913
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +Y+ LI CK+ + LL+E+ + GF T +++ G AGN+ A L
Sbjct: 914 VAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLR 973
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M K G+ SN + +VD + + N+ + M
Sbjct: 974 SMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 168/345 (48%), Gaps = 4/345 (1%)
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
P+ ++ LM ++G EA VF + P + N +L L K + ++
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
F G+ H +P++ TY +I CK G ++ A+ +L E+G+ G +PN +TY I+ R
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
R +E+ +M KG D + Y +I F R +EA + +M+ G++ + ++
Sbjct: 263 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 322
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
YN LI+ + ++G +E A+ + DEM G E + L++G+CKAG ++ A ++ M
Sbjct: 323 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 382
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLP 359
+ G + + + Y+ +++ + + A + + M+ + TYS +++ LC+ L
Sbjct: 383 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQ 442
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ +L + +G++ ++ G E++ I ++R
Sbjct: 443 GTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMR 487
>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 566
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 209/410 (50%), Gaps = 4/410 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ + C+ + ++++M E G + VTYNSL+ G + L+ SL LLD +++ G
Sbjct: 138 LVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKG 197
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ ++Y+ L+ ++ DEA+++ ++I P ++N++L GLCK T++A+
Sbjct: 198 LVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAI 257
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+FR L GF P +V+YNIL++ LC GR A +L E+ +P+ +TY ++
Sbjct: 258 RLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSL 317
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + LE+L M R + Y +IA K G+L ++QM+ +
Sbjct: 318 ALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNE 377
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN + L C+EG ++ A+ ++ + + + + I+I LC+ GN A L
Sbjct: 378 GTYNAIATL-CEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYE 436
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV---KDSFTYSSMVHNLCKAKRL 358
M K GF + Y+ ++ L +G ++ AI +F ME D+ Y+S++ CK++R
Sbjct: 437 MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENNKPDTENYNSLILGCCKSRRT 496
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
A + + G ++ +V+G+ H A K+ ++++ +
Sbjct: 497 DLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRELQLRDV 546
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 141/284 (49%)
Query: 54 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 113
L+ M+E G PDV+ L++ L + K +A +V + MI + P +++ +++ LC+
Sbjct: 85 LEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTFLVSSLCR 144
Query: 114 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
A+++ ++++G+ VTYN L++GLC G L + +L L G PNA T
Sbjct: 145 KGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYT 204
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
Y+ +++ ++ R ++L + KG + Y ++ K GR ++A ++
Sbjct: 205 YSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELP 264
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
+ G ++VSYN L+ C EG+ E A +LL EM T+ ILI L G +
Sbjct: 265 SKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTE 324
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
A LE M + F +YN I+ L KDGK+D + + M
Sbjct: 325 HALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQM 368
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 130/286 (45%), Gaps = 2/286 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C+ + + + G SP+VV+YN L+ + LL EM
Sbjct: 242 VLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGD 301
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P +YN L+ L G+ + A V ++MI P +++N ++ LCK+ D
Sbjct: 302 ERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLV 361
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + P TYN I LC+ G ++ A I++ LG+ H+ Y ++
Sbjct: 362 VKCLDQMMYRHCNPNEGTYNA-IATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R ++L M + G+T D F Y ++I G L EA + M + + D
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENN-KPD 479
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+YN+LI CK + + A + + M +G+ ++ T+TIL++G+
Sbjct: 480 TENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGI 525
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 118/282 (41%), Gaps = 41/282 (14%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ + C ++ +L M SP VTYN LI + +L++L+EM+
Sbjct: 277 ILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRA 336
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN--------------- 105
P SYN ++ L + GK D + M+ P T+N
Sbjct: 337 RFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAF 396
Query: 106 -------------------IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
I++ LC+ T A ++ + K+GF P+ TY+ LI+GL
Sbjct: 397 SIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGL 456
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C G L A I + + + P+ Y +++ C ++R+ L L++ M KGY +
Sbjct: 457 CMEGMLNEAIEIFSVM-EENNKPDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNE 515
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL-DIVSYNTL 247
Y ++ + + AT + ++ QL D++S +TL
Sbjct: 516 TTYTILVEGIIHEKEMDLATKVLREL-----QLRDVISQSTL 552
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 106/222 (47%), Gaps = 4/222 (1%)
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K RL A + L+ + + G P+ T ++ + K + ++++ M G D
Sbjct: 74 KELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDAS 133
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y ++++ + G + A +++M G + V+YN+L+ C G L + LLD +
Sbjct: 134 SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRL 193
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
++G + YT++ L++ K A L+ + G + NL +YN ++ L K+G+
Sbjct: 194 IQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRT 253
Query: 328 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
+ AI +F + K + +Y+ ++ +LC R A+ LL
Sbjct: 254 EDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLL 295
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 186/372 (50%), Gaps = 6/372 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M++D + FD + + M G SP+VVTY +LI G R + L DEM+E
Sbjct: 163 MVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEK 222
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P V Y L+ L + EA +F+ M + P T+N M++G CK + A
Sbjct: 223 KIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKA 282
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L ++ + G +P +VT+ ILI GLCK + +AR L ++ G PN Y ++
Sbjct: 283 LELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDG 342
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ L + S +++ D F Y +I + R++EA +++M G +
Sbjct: 343 YCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPN 402
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHL 299
V+YNTLI+ YCKEG +E A + +M ++G E + T + LIDG CKAG ++ A L+
Sbjct: 403 AVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYT 462
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKA 355
E + K G ++ AY ++D KDG A + + M+ + FT S ++ LCK
Sbjct: 463 EMVIK-GLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521
Query: 356 KRLPSASKLLLS 367
R+ A KL L+
Sbjct: 522 GRISDAIKLFLA 533
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 190/392 (48%), Gaps = 54/392 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C ++ MR +G+ P++ TYN+++ G + + + +L+L EML
Sbjct: 233 ILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGD 292
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V ++ L+ L + + A + DM + P +N +++G CK A
Sbjct: 293 GLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEA 352
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + ++KH +P++ TY+ILIKGLC R+ A +L+E+ G PNA+TY T++
Sbjct: 353 LSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLID- 411
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
GYC K G +++A + QM G++ +
Sbjct: 412 ---------------------------GYC-------KEGNMEKAIEVCSQMTEKGIEPN 437
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
I++++TLI+ YCK GK+EAA L EM +G D +T LIDG K GN K A RLH
Sbjct: 438 IITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHK 497
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF-----------------ESMEVKDS 342
E M + G N+ +C++D L KDG+I AI +F S+ +
Sbjct: 498 E-MQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNH 556
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC R+ ASK SG+R
Sbjct: 557 VMYTALIQGLCTDGRIFKASKFFSDMRCSGLR 588
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 191/395 (48%), Gaps = 9/395 (2%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
+ +L+R+ + +P+V + LI + L+ +L + +M + P + + N ++
Sbjct: 113 FNVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVY---YKMDVLPAMQACNMVLDG 167
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
L + G+ D +V+ DM+ +P T+ +++G C+ A R+F + + P
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT 227
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
+V Y ILI+GLC R+ A + + + +SG PN TY T+M + K LE+
Sbjct: 228 VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYX 287
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M G + + +I K + A ++ M + GV +I YN LI+ YCK G
Sbjct: 288 EMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAG 347
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
L A L E+EK D +T++ILI GLC ++ A L+ M K GF N YN
Sbjct: 348 NLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYN 407
Query: 316 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++D K+G ++ AI V M K + T+S+++ CKA ++ +A L +
Sbjct: 408 TLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK 467
Query: 372 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
G+ A A++DG G +EA ++ +++ A
Sbjct: 468 GLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEA 502
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 201/385 (52%), Gaps = 4/385 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
++ ++ G +P + TYN+L+ G + L ++DLL ++++ G PDV +Y SL+ L
Sbjct: 56 LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLG 115
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ + EA ++F++M L T + ++ GL + A +++ + G VP++V
Sbjct: 116 KKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVV 175
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T + +I GLCKAGR+ A I K + G APN + Y+ ++ + RK LE+L+ M
Sbjct: 176 TLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 235
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K+ T D Y +I K G + A + ++M+ G + D+ +YN LI+ +CK G
Sbjct: 236 KKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNT 295
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+AA + D+M + T+ LI GLCK + A L+ ++M + G + Y+ +
Sbjct: 296 DAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSL 355
Query: 318 VDRLGKDGKIDHAINVFESME---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
VD L K GK++ +F+ ME V +S T + ++ +LCKA R+ A L + K G+
Sbjct: 356 VDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMP 415
Query: 375 ILKSAQKAVVDGLRHSGCRREAKKI 399
A +++ L SG E + +
Sbjct: 416 -HPYAYNSIISALIKSGKVNEGQAV 439
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 172/363 (47%), Gaps = 4/363 (1%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
T++ LI G + +L + L E G D+ +Y +++ L + K EA + + +
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
TP AT+N +LNGLCK + A+ + R + +G P++VTY LI GL K R
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
A + KE+ G A + + YT +++ + K + M +G D T+
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I K GR+ A + M G+ + V Y+ LI+ CK K++ A +L +M+K
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
D T+ ILIDGLCK+G++ AR + M + G ++ YN ++ K G D A
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300
Query: 333 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
VF+ M + TY +++ LCK ++L AS + G ++VDGL
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360
Query: 389 HSG 391
SG
Sbjct: 361 KSG 363
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 37/232 (15%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ A + M EAG PDV TYN LI+G + + + D+M
Sbjct: 249 ILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSS 308
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+V +Y +L ++GLCK R A
Sbjct: 309 RCSPNVVTYGTL-----------------------------------ISGLCKRRQLTKA 333
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ +++ G P+ Y+ L+ GLCK+G+L + E+ SG A + I
Sbjct: 334 SLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHL 393
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
C NR + + + +A++++G + Y ++I+A +K G++ E ++M
Sbjct: 394 CKANRVDE-AVSLFNAIRKEGMPHP-YAYNSIISALIKSGKVNEGQAVYQEM 443
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 211/408 (51%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C +L M + G+ P+ +TYN+LI G R + + + DEM+
Sbjct: 281 ILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVAC 340
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI ++ +N+L++ + + GK ++A + Q+M+ + P + T+++++ G C+ + A
Sbjct: 341 GIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARA 400
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++K P ++TY+++I GLC+ G L+ IL+E+ +G PNA+ YTT+M
Sbjct: 401 FELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTA 460
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + IL M+ +G D F Y ++I F K R++EA Y+ +M+ ++ +
Sbjct: 461 HAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPN 520
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y I+ Y K G++E A +EM G + +T LI+G CK GN+ A
Sbjct: 521 AHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFR 580
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
++ +++ Y+ ++ L ++GK+ A +F ++ K ++FTY+S++ CK
Sbjct: 581 FILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQG 640
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ AS+LL G+ ++DGL +G AK + I
Sbjct: 641 NVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIE 688
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 187/395 (47%), Gaps = 22/395 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
ML+D+Y + + + P +++ NSL+ + + + + D M
Sbjct: 159 MLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAH 218
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PDV++Y +++ ++G +A RV +M G+ K R D A
Sbjct: 219 KVLPDVYTYTNMISAHCKVGNVKDAKRVLLEM--GE----------------KARLLDEA 260
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + R + G VP+L TY+ILI G C R R A+ +L E+ D G P ITY ++
Sbjct: 261 IELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDG 320
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + I M G + + T++ K G++++A + M++M+ GV+ D
Sbjct: 321 FMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPD 380
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y+ LI +C+ + A+ LLDEM+K+ T++++I+GLC+ GN++G L
Sbjct: 381 SQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILR 440
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M G N Y ++ K+G+++ + + E M + D F Y+S++ CKAK
Sbjct: 441 EMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAK 500
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
R+ A L+ L+ +R A +DG +G
Sbjct: 501 RMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAG 535
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 192/402 (47%), Gaps = 5/402 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A+ + + IL RMRE GI PDV YNSLI G + + + L EMLE
Sbjct: 457 LMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR 516
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +Y + + + G+ + A+R F +M+ + P + ++ G CK A
Sbjct: 517 LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAF 576
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + + ++ TY++LI GL + G++ A I EL + G PNA TY +++
Sbjct: 577 SVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGS 636
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++L M KG D Y +I K G ++ A + + + G+ +
Sbjct: 637 CKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNC 696
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y +++ YCK AA+ LL+EM +G D + + ++++ CK + A +
Sbjct: 697 VTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQE 756
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
M + GF S + ++N +++ K GK+ A ++ E M + + TY+S++ + CKA
Sbjct: 757 MLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGM 815
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ A +L L + V +++ G + G E +
Sbjct: 816 MGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSAL 857
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 194/410 (47%), Gaps = 27/410 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C+ + +++ + + DV TY+ LI G +RN + + + E+ E G
Sbjct: 562 LIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG 621
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ ++YNSL+ + G D+A+++ ++M + P T+NI+++GLCK + A
Sbjct: 622 LLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAK 681
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ G P VTY ++ G CK+ A +L+E+ G P+A Y I+ C
Sbjct: 682 NLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFC 741
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K++ L++ M KG+ + T+I + K G+L+EA +E+M+ +
Sbjct: 742 CKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNH 800
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y +LI+ CK G + A L EM+++ T+T L+ G GN+ E
Sbjct: 801 VTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEE 860
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSA 361
M G + + Y ++D ++G NV E+ ++KD M
Sbjct: 861 MVAKGIEPDKMTYYVMIDAYCREG------NVMEACKLKDEILVKGMP------------ 902
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI-QSKIRMAKISH 410
+KSG R+ + G + +G EA ++ +S ++ +S+
Sbjct: 903 -------MKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSN 945
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 196/412 (47%), Gaps = 25/412 (6%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAG-----------------ATRNSLLSCSLDLLDEML 58
+ + + M + PDV TY ++I+ + LL +++L M+
Sbjct: 209 WKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMV 268
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
+ G+ PD+++Y+ L++ + EA + +MI L P T+N +++G + +
Sbjct: 269 DKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIE 328
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A R+ + G L+ +N L+ G+CKAG++ A I++E+ + G P++ TY+ ++
Sbjct: 329 QAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLI 388
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ R + E+L MK++ Y +I + G L+ + +MV +G++
Sbjct: 389 EGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLK 448
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+ V Y TL+ + KEG++E + ++L+ M +QG D + + LI G CKA ++ AR +
Sbjct: 449 PNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTY 508
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCK 354
L M + N Y +D K G+++ A F M + + Y++++ CK
Sbjct: 509 LMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCK 568
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQ--KAVVDGLRHSGCRREAKKIQSKIR 404
+ A + L R+L+ Q ++ GL +G EA I S+++
Sbjct: 569 EGNVTEAFSVFRFILSR--RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQ 618
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 172/346 (49%), Gaps = 15/346 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + D +L M GI+PD+VTYN LI G + + + +L D++ G
Sbjct: 632 LISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRG 691
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +Y +++ + P A ++ ++M+ + P +N++LN CK + AL
Sbjct: 692 LTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKAL 751
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM--- 178
+F+ + + GF V++N LI+G CK+G+L+ A +L+E+ + PN +TYT+++
Sbjct: 752 DLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHN 810
Query: 179 -KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
K +L LE M+ + Y +++ + IG + E + E+MV G+
Sbjct: 811 CKAGMMGEAKRLWLE----MQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGI 866
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEM------EKQGFECDKYTHTILIDGLCKAGN 291
+ D ++Y +I+ YC+EG + A L DE+ K GF T +++ G AGN
Sbjct: 867 EPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGN 926
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
+ A L M K G+ SN + +VD + + N+ + M
Sbjct: 927 MDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 208/438 (47%), Gaps = 39/438 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ + ++ +M+EAG +PD+VTYNSLI G + LL + + ++M +
Sbjct: 260 IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 319
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV +YN+L++C + + +A +M L P T++ ++ CK A
Sbjct: 320 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 379
Query: 121 LRMFRGLQKHGFVP-----------------------------------ELVTYNILIKG 145
++ F +++ P +VTY L+ G
Sbjct: 380 IKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDG 439
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LC+ GR++ A + + + ++G APN TYT ++ + ++ + +IL MK K D
Sbjct: 440 LCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPD 499
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y T++ RL+EA + ++ G+ + V Y TL++ Y K G+ A LL+
Sbjct: 500 LLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLE 559
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM G + T+ LIDGLCK+G ++ A H M++IG N+ Y +VD L K+
Sbjct: 560 EMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNN 619
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+ A +F+ M K D Y++++ K L A L ++ G+ + A
Sbjct: 620 CFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYT 679
Query: 382 AVVDGLRHSGCRREAKKI 399
A++ GL HSG ++A+ +
Sbjct: 680 ALIWGLSHSGQVQKARNL 697
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 171/336 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
IDA+C+ MR ++P+ TY SLI + L+ +L L++E+L+ G
Sbjct: 366 FIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAG 425
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I +V +Y +L+ L + G+ EA VF+ M+ + P T+ +++G K + + A
Sbjct: 426 IKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAK 485
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +++ P+L+ Y ++ GLC RL A+ ++ E+ +SG NA+ YTT+M
Sbjct: 486 DILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAY 545
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F++ + L +L M G YC +I K G ++EA + +M G+Q ++
Sbjct: 546 FKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNV 605
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
Y L++ CK E A L DEM +G DK +T LIDG K GN++ A +
Sbjct: 606 AVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDR 665
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M +IG + +L AY ++ L G++ A N+ + M
Sbjct: 666 MIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEM 701
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 179/372 (48%), Gaps = 4/372 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P +++L + +L + + +M + + P S N+L+H L ++G+ D + +
Sbjct: 183 PGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKF 242
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
F+DM + T+NIM++ LCK + A +F +++ GF P++VTYN LI G K
Sbjct: 243 FKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGK 302
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
G L I +++ D+ P+ ITY ++ C + + E L MK G +
Sbjct: 303 LGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVT 362
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y T I AF K G L+EA + M + + +Y +LI+ CK G L A L++E+
Sbjct: 363 YSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEIL 422
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
+ G + + T+T L+DGLC+ G +K A M G N E Y +V K +++
Sbjct: 423 QAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEME 482
Query: 329 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 384
+A ++ + M+ K D Y +++ LC RL A L+ +SG+ ++
Sbjct: 483 YAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLM 542
Query: 385 DGLRHSGCRREA 396
D SG EA
Sbjct: 543 DAYFKSGQATEA 554
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 179/391 (45%), Gaps = 4/391 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D M AGI V TYN +I + L + L +M E G PD+ +YNSL
Sbjct: 237 DLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSL 296
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ +LG DE +F+ M D P T+N ++N CK A ++ +G
Sbjct: 297 IDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGL 356
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P +VTY+ I CK G L+ A ++ PN TYT+++ + L+
Sbjct: 357 KPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALK 416
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
++ + + G + Y ++ + GR+KEA + M+ GV + +Y L++ +
Sbjct: 417 LVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFI 476
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K ++E A +L EM+++ + D + ++ GLC ++ A+L + + + G ++N
Sbjct: 477 KAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAV 536
Query: 313 AYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
Y ++D K G+ A+ + E M + TY +++ LCK+ + A
Sbjct: 537 IYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRM 596
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ G++ + A+VDGL + C AKK+
Sbjct: 597 SEIGLQPNVAVYTALVDGLCKNNCFEVAKKL 627
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 160/346 (46%), Gaps = 41/346 (11%)
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
P +++L L +LG +EA+ F M + P + N +L+ L K D + +
Sbjct: 183 PGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKF 242
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
F+ + G + TYNI+I LCK G L AR + ++ ++G P+ +TY +++
Sbjct: 243 FKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLI----- 297
Query: 184 NRKYKLGLE-----ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ KLGL I MK D Y +I F K R+ +A +++ +M +G++
Sbjct: 298 DGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLK 357
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
++V+Y+T I+ +CKEG L+ A +M + +++T+T LID CKAGN+ A
Sbjct: 358 PNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKL 417
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRL 358
+E + + G N+ TY++++ LC+ R+
Sbjct: 418 VEEILQAGIKLNV-------------------------------VTYTALLDGLCEEGRM 446
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
A ++ + L +GV + A+V G + AK I +++
Sbjct: 447 KEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMK 492
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 129/270 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ + + + IL M+E I PD++ Y +++ G S L + L+ E+ E G
Sbjct: 471 LVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESG 530
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I + Y +LM F+ G+ EA + ++M+ L T+ +++GLCK+ A+
Sbjct: 531 INTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAM 590
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F + + G P + Y L+ GLCK A+ + E+ D G P+ I YT ++
Sbjct: 591 HHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGN 650
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + L + M G D Y +I G++++A + +++M+ GV D
Sbjct: 651 MKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDE 710
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
V Y LI Y GK++ A L +EM K+G
Sbjct: 711 VVYMCLIKKYYALGKVDEALELQNEMAKRG 740
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 146/330 (44%), Gaps = 15/330 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+ + M AG++P+ TY +L+ G + + + D+L EM E
Sbjct: 436 LLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKC 495
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+ Y +++ L + +EA + ++ + + +++ K+ AL
Sbjct: 496 IKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEAL 555
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G + VTY LI GLCK+G ++ A + + G PN YT ++
Sbjct: 556 TLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGL 615
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N +++ ++ M KG D Y +I +K G L+EA + ++M+ G++LD+
Sbjct: 616 CKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDL 675
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y LI G+++ A LLDEM +G D+ + LI G +
Sbjct: 676 HAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKV--------- 726
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
D LE N + R G DHA+
Sbjct: 727 ------DEALELQNEMAKRGMITGLSDHAV 750
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 104/209 (49%), Gaps = 5/209 (2%)
Query: 206 GFG-YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
GFG + + +A +++G L+EA++ +M V S N L++ K G+ + +
Sbjct: 184 GFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFF 243
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+M G + +T+ I+ID LCK G+++ AR M + GF ++ YN ++D GK
Sbjct: 244 KDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKL 303
Query: 325 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
G +D I +FE M+ D TY+++++ CK +R+P A + L +G++
Sbjct: 304 GLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTY 363
Query: 381 KAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+D G +EA K +R ++
Sbjct: 364 STFIDAFCKEGMLQEAIKFFVDMRRVALT 392
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 4/195 (2%)
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 277
K+GR + + + M G++ + +YN +I+ CKEG LE A L +M++ GF D
Sbjct: 232 KVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIV 291
Query: 278 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
T+ LIDG K G + E M D ++ YN +++ K ++ A M
Sbjct: 292 TYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEM 351
Query: 338 EVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 393
+ + TYS+ + CK L A K + + + + +++D +G
Sbjct: 352 KANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNL 411
Query: 394 REAKKIQSKIRMAKI 408
EA K+ +I A I
Sbjct: 412 AEALKLVEEILQAGI 426
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 202/427 (47%), Gaps = 40/427 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI A C+ +L M G+ PD T+ +++ G L +L + ++M+E
Sbjct: 194 VLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEF 253
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD-LTPCTATFNIMLNGLCKNRYTDN 119
G S N ++H + G+ ++A Q+M D P TFN ++NGLCK + +
Sbjct: 254 GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKH 313
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+ + + + G+ P++ TYN +I GLCK G ++ A L ++ +PN +TY T++
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLIS 373
Query: 180 ---------------------------CCFRN--------RKYKLGLEILSAMKRKGYTF 204
C F + R +++ +E+ M+ KG
Sbjct: 374 TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP 433
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D F Y +I + G+L EA + ++QM G +++YNTLI+ +CK K+ A +
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIF 493
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
DEME G + T+ LIDGLCK+ ++ A ++ M G + YN ++ +
Sbjct: 494 DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRG 553
Query: 325 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
G I A ++ ++M D TY +++ LCKA R+ ASKLL S G+ + A
Sbjct: 554 GDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAY 613
Query: 381 KAVVDGL 387
V+ GL
Sbjct: 614 NPVIQGL 620
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 192/375 (51%), Gaps = 5/375 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
+++ +C+ + + M + G PD T+N+L+ G + + +++++D ML+
Sbjct: 264 VIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ 323
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G PDV++YNS++ L +LG+ EA MI D +P T T+N +++ LCK +
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + R L G +P++ T+N LI+GLC R A + +E+ G P+ TY ++
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
K L +L M+ G Y T+I F K +++EA + ++M GV
Sbjct: 444 SLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSR 503
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ V+YNTLI+ CK ++E A L+D+M +G + DK+T+ L+ C+ G+IK A +
Sbjct: 504 NSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIV 563
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ M G + ++ Y ++ L K G+++ A + S+++K Y+ ++ L +
Sbjct: 564 QAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRK 623
Query: 356 KRLPSASKLLLSCLK 370
++ A L L+
Sbjct: 624 RKTTEAINLFREMLE 638
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 189/359 (52%), Gaps = 5/359 (1%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
+M GI PDV T+N LI R L ++ +L++M G+ PD ++ ++M + G
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEG 238
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL-QKHGFVPELVTY 139
D A R+ + M+ + + N++++G CK ++AL + + + GF P+ T+
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTF 298
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
N L+ GLCKAG ++ A I+ + G+ P+ TY +++ + + K +E L M
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMIT 358
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
+ + + Y T+I+ K +++EAT+ + + G+ D+ ++N+LI C
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV 418
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A L +EM +G E D++T+ +LID LC G + A L+ M G ++ YN ++D
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 320 RLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
K KI A +F+ MEV ++S TY++++ LCK++R+ AS+L+ + G +
Sbjct: 479 GFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQK 537
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 139/292 (47%), Gaps = 5/292 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGA--TRNSLLSCSLDLLDEMLE 59
LI C+ + + + GI PDV T+NSLI G TRN +++L +EM
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH--RVAMELFEEMRS 428
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G PD ++YN L+ L GK DEA + + M T+N +++G CK
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIRE 488
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +F ++ HG VTYN LI GLCK+ R+ A ++ ++ G P+ TY +++
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLT 548
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
R K +I+ AM G D Y T+I+ K GR++ A+ + + G+ L
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIAL 608
Query: 240 DIVSYNTLIN-LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+YN +I L+ K EA L + +E+ D ++ I+ GLC G
Sbjct: 609 TPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGG 660
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 140/303 (46%), Gaps = 19/303 (6%)
Query: 107 MLNGLCKNRYTDNALRMFR-GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
+L+ L ALR+F +K F PE Y ++ L ++G R IL+++ +S
Sbjct: 53 LLDSLRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNS 112
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG-------YCTVIAAFVK 218
G + +++ +++L EIL + + D FG Y ++ V
Sbjct: 113 GCEMGTSPFLILIESY---AQFELQDEILGVVH---WMIDDFGLKPDTHFYNRMLNLLVD 166
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
LK +M G++ D+ ++N LI C+ +L A L+L++M G D+ T
Sbjct: 167 GNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT 226
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
T ++ G + G++ GA E M + G + + N IV K+G+++ A+N + M
Sbjct: 227 FTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMS 286
Query: 339 VKDSF-----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 393
+D F T++++V+ LCKA + A +++ L+ G +V+ GL G
Sbjct: 287 NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346
Query: 394 REA 396
+EA
Sbjct: 347 KEA 349
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 188/377 (49%), Gaps = 4/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++AY F +R+ + + L + +L S + +E+L+
Sbjct: 160 VLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDC 219
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PPDV +N LMH L + K +EA +F ++ L P +FN ++NG CK+ D
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+ R + ++ P++ TY++LI GLCK G+L A + E+ D G PN +T+TT++
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ LG+EI M RKG D Y T+I K+G L+EA + +M G++ D
Sbjct: 340 HCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPD 399
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y LI+ CKEG LE+A + EM K+G E D T LI G C+ G + A L
Sbjct: 400 KFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLR 459
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + G + Y ++ K G + + + M+ V TY+ +++ LCK
Sbjct: 460 EMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQG 519
Query: 357 RLPSASKLLLSCLKSGV 373
++ +A+ LL + L GV
Sbjct: 520 QMKNANMLLDAMLNLGV 536
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 175/320 (54%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C+ + + + + G+ P VV++N+LI G ++ L L M+E
Sbjct: 230 VLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMEN 289
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PDV++Y+ L++ L + G+ D+AN++F +M L P TF ++NG C D
Sbjct: 290 RVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLG 349
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + + G P+++TYN LI GLCK G LR A+ ++ E+ G P+ TYT ++
Sbjct: 350 MEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDG 409
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + + LEI M ++G D + +I+ F + G++ EA + +M+ G++ D
Sbjct: 410 CCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPD 469
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y +I+ +CK+G ++ + LL EM+ G T+ +L++GLCK G +K A + L+
Sbjct: 470 DATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLD 529
Query: 301 YMNKIGFDSNLEAYNCIVDR 320
M +G + YN +++R
Sbjct: 530 AMLNLGVVPDDITYNILLER 549
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 136/309 (44%), Gaps = 4/309 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F++++N + Y +A++ FR ++KH + L L K A +E+
Sbjct: 158 FSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEIL 217
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
D G+ P+ + +M + K + + ++G + T+I + K G L
Sbjct: 218 DCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLD 277
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
+ M+ + V D+ +Y+ LIN CKEG+L+ A L EM +G + T T LI
Sbjct: 278 QGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLI 337
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
+G C G + M + G ++ YN +++ L K G + A + M +
Sbjct: 338 NGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLK 397
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D FTY+ ++ CK L SA ++ +K G+ + A A++ G G EA++
Sbjct: 398 PDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERT 457
Query: 400 QSKIRMAKI 408
++ A I
Sbjct: 458 LREMLEAGI 466
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLID C+ ++ I M + GI D V + +LI+G R + + L EMLE
Sbjct: 405 MLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEA 464
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD +Y ++H + G ++ ++M C P T+N++LNGLCK NA
Sbjct: 465 GIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNA 524
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
+ + G VP+ +TYNIL++ +A +
Sbjct: 525 NMLLDAMLNLGVVPDDITYNILLERTLQAWK 555
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 4/183 (2%)
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
S ++ +G + ++ A+ G +A + +Q+ S L + K
Sbjct: 144 SVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKL 203
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
A+ +E+ G+ D +L+ LCK I A+L + K G + ++
Sbjct: 204 NLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSF 263
Query: 315 NCIVDRLGKDGKIDHAINV----FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
N +++ K G +D + E+ D FTYS +++ LCK +L A+KL L
Sbjct: 264 NTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCD 323
Query: 371 SGV 373
G+
Sbjct: 324 RGL 326
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 200/400 (50%), Gaps = 4/400 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ ++ +CQ D G+++L ++ + G+ P +VT+ +LI G + + +++L D+M+
Sbjct: 133 IFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAK 192
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV++YN++++ L ++G+ A + + M P T++ +++ LC++R + A
Sbjct: 193 GCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEA 252
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F ++ G P++ TY LI+GLCK R + A +L E+ P+ +T+ ++
Sbjct: 253 LDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDT 312
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K L +L M G + Y +++ + + EA M+T G + +
Sbjct: 313 FCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPN 372
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I SYN LIN YCK +++ A L +EM QG + ++ LI G C+ G ++ A+
Sbjct: 373 IFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFR 432
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
M G +L Y+ ++D K G + A +F +M+ + Y+ +VH +CK+
Sbjct: 433 NMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSG 492
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
A KL G++ +++GL G EA
Sbjct: 493 NHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEA 532
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 188/359 (52%), Gaps = 4/359 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ A +L +M EAG P++VTY++LI R+ L++ +LD+ M G
Sbjct: 204 IINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKG 263
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+++Y SL+ L + + EA+ + +M ++ P TFN++++ CK AL
Sbjct: 264 ISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEAL 323
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + + G P +VTY+ L+ G + AR + + G PN +Y ++
Sbjct: 324 GVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGY 383
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ +++ + M +G T + Y T+I F ++G+L+EA D M T+G D+
Sbjct: 384 CKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDL 443
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y+ L++ +CK+G L A+ L M+ + + +TIL+ +CK+GN K AR
Sbjct: 444 FTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSE 503
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
+ G +++ Y I++ L K+G +D A+ F +ME D +Y+ ++ L + K
Sbjct: 504 LFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHK 562
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 183/367 (49%), Gaps = 5/367 (1%)
Query: 4 DAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATR-NSLLSCSLDLLDEMLEMGI 62
DA F + D N M P ++ + L++ + + L +M +G+
Sbjct: 65 DASSSFRNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGL 124
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P++++ + M+C QL + D V +I L P TF ++NGLCK A+
Sbjct: 125 SPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVE 184
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+F + G P++ TYN +I GLCK G A +LK++ ++G PN +TY+T++
Sbjct: 185 LFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLC 244
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
R+R L+I S MK KG + D F Y ++I K R KEA+ + +M + + DIV
Sbjct: 245 RDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIV 304
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
++N L++ +CKEGK+ A +L M + G E + T++ L+ G ++ AR M
Sbjct: 305 TFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVM 364
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRL 358
G N+ +YN +++ K +ID A+ +F M ++ +Y++++H C+ +L
Sbjct: 365 ITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKL 424
Query: 359 PSASKLL 365
A L
Sbjct: 425 REAQDLF 431
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 154/310 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+F + +LN M I PD+VT+N L+ + +S +L +L M EMG
Sbjct: 274 LIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMG 333
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V +Y+SLM+ EA ++F MI P ++NI++NG CK + D A+
Sbjct: 334 VEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAM 393
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + G P V+YN LI G C+ G+LR A+ + + + +G+ P+ TY+ ++
Sbjct: 394 QLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGF 453
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + AM+ + Y ++ A K G K+A ++ G+Q +
Sbjct: 454 CKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHV 513
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
Y T+IN CKEG L+ A ME G D+ ++ ++I GL + + A L +
Sbjct: 514 QLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGE 573
Query: 302 MNKIGFDSNL 311
M GF +++
Sbjct: 574 MRDRGFIADV 583
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 140/275 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D +C+ +L M E G+ P+VVTY+SL+ G + + + + L M+
Sbjct: 308 VLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITK 367
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+++SYN L++ + + DEA ++F +MI LTP ++N +++G C+ A
Sbjct: 368 GCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREA 427
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+FR + +G +P+L TY+IL+ G CK G L A + + + + PN + YT ++
Sbjct: 428 QDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHA 487
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ +K ++ S + +G Y T+I K G L EA + M DG D
Sbjct: 488 MCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPD 547
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
+SYN +I + A LL+ EM +GF D
Sbjct: 548 EISYNVIIRGLLQHKDESRALLLVGEMRDRGFIAD 582
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 157/355 (44%), Gaps = 5/355 (1%)
Query: 50 SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP-DEANRVFQDMICGDLTPCTATFNIML 108
+L + ML P + + L+ + ++G+ D + + M L+P T +I +
Sbjct: 76 ALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFM 135
Query: 109 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
N C+ + D + + K G P +VT+ LI GLCK G A + ++ G
Sbjct: 136 NCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQ 195
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
P+ TY TI+ + + +L M+ G + Y T+I + + + EA D
Sbjct: 196 PDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDI 255
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
M G+ DI +Y +LI CK + + A LL+EM D T +L+D CK
Sbjct: 256 FSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCK 315
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 344
G + A L+ M ++G + N+ Y+ ++ + A +F M K + F+
Sbjct: 316 EGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFS 375
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
Y+ +++ CKAKR+ A +L + G+ + ++ G G REA+ +
Sbjct: 376 YNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDL 430
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 123/265 (46%), Gaps = 5/265 (1%)
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL-KELGDSGHAPNAIT 173
R D+AL F + +P ++ + L+ + K G+ L K++ G +PN T
Sbjct: 71 RNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYT 130
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
+ M C + ++ LG +L+ + + G + T+I K+G +A + + MV
Sbjct: 131 LSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMV 190
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
G Q D+ +YNT+IN CK G+ AA LL +ME+ G + + T++ LID LC+ +
Sbjct: 191 AKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVN 250
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
A YM G ++ Y ++ L K + A + M + D T++ +V
Sbjct: 251 EALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLV 310
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVR 374
CK ++ A +L + + GV
Sbjct: 311 DTFCKEGKVSEALGVLKTMTEMGVE 335
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 66/136 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D +C+ + + M+ + P++V Y L+ ++ + L E+
Sbjct: 448 ILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQ 507
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P V Y ++++ L + G DEA F++M P ++N+++ GL +++ A
Sbjct: 508 GLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRA 567
Query: 121 LRMFRGLQKHGFVPEL 136
L + ++ GF+ ++
Sbjct: 568 LLLVGEMRDRGFIADV 583
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 5/174 (2%)
Query: 241 IVSYNTLINLYCKEGKL-EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
I+ + L++ K G+ + L +ME G + YT +I ++ C+ + L
Sbjct: 92 IIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVL 151
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ K+G + + +++ L K G+ A+ +F+ M K D +TY+++++ LCK
Sbjct: 152 AKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKI 211
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+A+ LL ++G + ++D L EA I S ++ IS
Sbjct: 212 GETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGIS 265
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 197/391 (50%), Gaps = 6/391 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
I M E+G+SP+V TYN LI G L L EM G P+V +YN+++
Sbjct: 190 IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYC 249
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+L K EA ++ + M L P ++N+++NGLC+ + + K +VP+ V
Sbjct: 250 KLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRV 309
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T+N LI G C G A + E+ +G +PN +TYTT++ + +E L M
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ +G +G Y T+I F + G LK+A M++MV +G I++YN LIN +C G++
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRM 429
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNC 316
E A LL EM ++GF D +++ +I G C+ ++ A +L +E + K G ++ Y+
Sbjct: 430 EDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAK-GISPDVATYSS 488
Query: 317 IVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++ L K ++ ++F+ M D TY+S+++ C L A +L ++ G
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG 548
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+++G +EAK++ K+
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRLLLKL 579
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 184/373 (49%), Gaps = 4/373 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C + + G M G P+VVTYN++I + + + LL M
Sbjct: 208 ILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALK 267
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P++ SYN +++ L + G+ E + + ++M P TFN ++NG C A
Sbjct: 268 GLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQA 327
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + K+G P +VTY LI +CKAG L A L ++ D G PN TYTT++
Sbjct: 328 LVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDG 387
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K +I+ M G+T Y +I +GR+++A+ +++M+ G D
Sbjct: 388 FSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPD 447
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+VSY+T+I+ +C+ +LE A+ L EM +G D T++ LI GLCK + +
Sbjct: 448 VVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQ 507
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M +G + Y +++ +G +D A+ + + M K D TY+ +++ K
Sbjct: 508 EMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQS 567
Query: 357 RLPSASKLLLSCL 369
R A +LLL L
Sbjct: 568 RTKEAKRLLLKLL 580
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 183/360 (50%), Gaps = 5/360 (1%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE-ANRVFQD 91
++ ++ R +L++ +L +++ G P V SYN+++ + + + + A +F++
Sbjct: 134 VFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKE 193
Query: 92 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
M+ ++P T+NI++ G C + L F ++++G +P +VTYN +I CK +
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRK 253
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
+ A +L+ + G PN I+Y ++ R + K EIL M ++ Y D + T
Sbjct: 254 IGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNT 313
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+I + +G +A +MV +G+ ++V+Y TLIN CK G L A LD+M +G
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG 373
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
+ T+T LIDG + G +K A ++ M + GF + YN +++ G+++ A
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDAS 433
Query: 332 NVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ + M + D +YS+++ C+ + L A +L + + G+ + +++ GL
Sbjct: 434 GLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGL 493
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 200/405 (49%), Gaps = 20/405 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC +F + M + G+SP+VVTY +LI + L+ +++ LD+M + G
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG 373
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +Y +L+ Q G +A ++ ++M+ TP T+N ++NG C ++A
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDAS 433
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + + GF+P++V+Y+ +I G C+ L A + E+ G +P+ TY+++++
Sbjct: 434 GLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGL 493
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R+ ++ M G D Y ++I A+ G L +A ++M+ G DI
Sbjct: 494 CKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDI 553
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID---------------GL 286
V+YN LIN + K+ + + A LL ++ + ++ T+ LID G
Sbjct: 554 VTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGF 613
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDS 342
C G + A LE M + G+ N E YN I+ K G I+ A N+++ M S
Sbjct: 614 CMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHS 673
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
T ++ +L + ++LL LKS RI ++A V+ G+
Sbjct: 674 VTIMALAKSLYHEGKEVELNQLLDYTLKS-CRITEAALAKVLIGI 717
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 167/350 (47%), Gaps = 28/350 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C + +L M E G PDVV+Y+++I+G RN L + L EM+ G
Sbjct: 419 LINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKG 478
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV +Y+SL+ L + + E +FQ+M+ L P T+ ++N C D AL
Sbjct: 479 ISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKAL 538
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + + GF P++VTYN+LI G K R + A+ +L +L PN ITY T++ C
Sbjct: 539 RLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNC 598
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N ++K L ++ G+C G + EA +E M+ G +L+
Sbjct: 599 -NNLEFKSALALMK------------GFCMK-------GLMNEADRVLESMLQKGYKLNE 638
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL-- 299
YN +I+ + K G +E AY L EM GF H++ I L K+ +G + L
Sbjct: 639 EVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFA----PHSVTIMALAKSLYHEGKEVELNQ 694
Query: 300 --EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS 347
+Y K + ++ K+G +D NV + M + YSS
Sbjct: 695 LLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLPYSS 744
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 152/349 (43%), Gaps = 48/349 (13%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV----------------------- 137
+A F++++ + + AL + + +GF+P ++
Sbjct: 132 SAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIF 191
Query: 138 -------------TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
TYNILI+G C AG L E+ +G PN +TY TI+ +
Sbjct: 192 KEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKL 251
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
RK ++L M KG + Y VI + G++KE ++ +E+M D V++
Sbjct: 252 RKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTF 311
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
NTLIN YC G A +L EM K G + T+T LI+ +CKAGN+ A L+ M
Sbjct: 312 NTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRD 371
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMVHNLCKAKRLP 359
G N Y ++D + G + A + + M V++ F TY+++++ C R+
Sbjct: 372 RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEM-VENGFTPTIITYNALINGHCILGRME 430
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE--AKKIQSKIRMA 406
AS LL ++ G + ++ G CR + K Q K+ M
Sbjct: 431 DASGLLQEMIERGFIPDVVSYSTIISGF----CRNQELEKAFQLKVEMV 475
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 192/377 (50%), Gaps = 4/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++IDA C+ + ++ +M E G PDVVTYN+++ G ++S + +L L +EM +
Sbjct: 85 VMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERL 144
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ S+N+++ L Q K D+A +VF +M D+ P + ++ I+++GL K + A
Sbjct: 145 GCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEA 204
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F+ + G P VTYN++I G+C A L A + K + G P+ T+ ++
Sbjct: 205 YKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDA 264
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K +L M G+ D Y T+I+ I R+ +A +E MV +
Sbjct: 265 HCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPT 324
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+ NTLI+ CK G+++ A +LD M G D T+ L+ G C+AG + AR L
Sbjct: 325 VVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLS 384
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M G N+ Y +V L K ++ A VF M+ + FTY++++ C A
Sbjct: 385 DMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAG 444
Query: 357 RLPSASKLLLSCLKSGV 373
++ KL + +G+
Sbjct: 445 QVDGGLKLFGEMVCAGI 461
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 181/376 (48%), Gaps = 8/376 (2%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M E +SPD +Y LI G + L+ + +L ++L G+ P +Y SL+H L
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
D+A +F DM P T+N+M++ CK + A + + + + G VP++VTYN
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
++ GLCK+ R+ A + E+ G PN ++ TI+ + K ++ M+ K
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
D + Y +I K G+L EA ++M+ G+ V+YN +I+ C L+ A
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
L M +G ++T ILID CK G + A L+ M G ++ Y+ ++ L
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300
Query: 322 GKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
++D A ++ E M + T ++++H LCKA R+ A ++L + + SG +
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG----Q 356
Query: 378 SAQKAVVDGLRHSGCR 393
S + L H CR
Sbjct: 357 SPDVVTYNTLVHGHCR 372
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 190/411 (46%), Gaps = 39/411 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID + + + ++ +G++P V Y SLI G + + +L +M
Sbjct: 15 ILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRR 74
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PP +YN ++ + G +EA + + MI P T+N +++GLCK+ + A
Sbjct: 75 GCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEA 134
Query: 121 LRMFRGLQKHG-----------------------------------FVPELVTYNILIKG 145
L +F +++ G P+ +Y ILI G
Sbjct: 135 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDG 194
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
L KAG+L A + + + DSG P+A+TY ++ LE+ +M+ KG
Sbjct: 195 LAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPS 254
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
F + +I A K G+L EA +++M DG D+V+Y+TLI+ C +++ A LL+
Sbjct: 255 RFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 314
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+M K+ + T LI GLCKAG IK AR L+ M G ++ YN +V + G
Sbjct: 315 DMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 374
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
+ + A + M + + TY+++V LCKA RLP A + SG
Sbjct: 375 QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG 425
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 199/443 (44%), Gaps = 41/443 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D C+ + + N M G +P+ ++N++I G + S + + + EM
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC--------- 112
IPPD WSY L+ L + GK +EA ++FQ M+ +TP T+N++++G+C
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240
Query: 113 ------------KNRYT--------------DNALRMFRGLQKHGFVPELVTYNILIKGL 146
+R+T D A R+ + + G VP++VTY+ LI GL
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C R+ AR +L+++ P +T T++ + + K E+L AM G + D
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T++ + G+ + A + + MV G+ ++V+Y L++ CK +L A + +
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+ G + +T+T LI G C AG + G M G + Y + L K G+
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR 480
Query: 327 IDHAINVF----ESM--EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
A+ + ES+ E Y V L +A ++ A + ++ G
Sbjct: 481 SARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERC 540
Query: 381 KAVVDGLRHSGCRREAKKIQSKI 403
++V GL SG EA+ + +I
Sbjct: 541 ASLVAGLCKSGQGGEARAVLEEI 563
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 180/375 (48%), Gaps = 14/375 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID + + Y + RM ++GI+P VTYN +I G L +L+L M
Sbjct: 190 ILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK 249
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +++N L+ + GK DEA R+ + M P T++ +++GLC D+A
Sbjct: 250 GCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 309
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K P +VT N LI GLCKAGR++ AR +L + SG +P+ +TY T++
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + + E+LS M +G + Y +++ K RL EA QM + G +
Sbjct: 370 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 429
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +Y LI +C G+++ L EM G D + L LCK+G + AR LE
Sbjct: 430 LFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSG--RSARA-LE 486
Query: 301 YMNKIGFDS------NLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVH 350
+ + G +S E Y VD L + GK++ A+ M ++ +S+V
Sbjct: 487 ILRE-GRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVA 545
Query: 351 NLCKAKRLPSASKLL 365
LCK+ + A +L
Sbjct: 546 GLCKSGQGGEARAVL 560
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 166/337 (49%), Gaps = 8/337 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDA+C+ D + +L RM + G PDVVTY++LI+G + + + LL++M++
Sbjct: 260 ILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKR 319
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P V + N+L+H L + G+ EA V M+ +P T+N +++G C+ T+ A
Sbjct: 320 QCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERA 379
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P +VTY L+ GLCKA RL A + ++ SG APN TYT ++
Sbjct: 380 RELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILG 439
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM----EQMVTDG 236
+ GL++ M G + D Y T+ A K GR A + + E + ++
Sbjct: 440 FCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEA 499
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
++ Y ++ + GK+E A + +M + G L+ GLCK+G AR
Sbjct: 500 WGDEV--YRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEAR 557
Query: 297 LHLEYMNKIGFDSNL--EAYNCIVDRLGKDGKIDHAI 331
LE + + + +A + + +GK +I+ A+
Sbjct: 558 AVLEEIMDLAYGGKARGKAAKFVEEMVGKGYEIEDAV 594
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 199/397 (50%), Gaps = 1/397 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C + + N + + PD+V YNSL+ G R L+ +L +++EM+E G
Sbjct: 260 LINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDG 319
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+W+YN +++ L ++G +A V D I P TFN M++G CK D+AL
Sbjct: 320 CHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSAL 379
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + +G P+ +TYN ++ GLCKAG+ + +E+ G PNAITY +++
Sbjct: 380 QLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENF 439
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + ++ M + G D + T+I F + G L A +++ G
Sbjct: 440 CKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATA 499
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++N LI Y + ++ A + EM +G++ D YT+ +L+DG CKA N+ A +HL
Sbjct: 500 DTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAE 559
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSA 361
M GF ++ + +++ L + ++ A+ + M V+ + L K+ +A
Sbjct: 560 MVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIM-VRMGVVPEVVDTILSTDKKEIAA 618
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
K+L+ L I + + +G+R + R+A+K
Sbjct: 619 PKILVEELMKKGHISYPTYEVLHEGVRDNKLTRKARK 655
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 178/375 (47%), Gaps = 4/375 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ L RM G PD TYN++I G + +L + +LL + + G
Sbjct: 190 LMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKG 249
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +Y SL++ L G + A +F + DL P +N ++ GLC+ +AL
Sbjct: 250 FVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHAL 309
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + + G P++ TYNI+I GLCK G + A ++ + G+ P+ T+ T++
Sbjct: 310 QVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGY 369
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K L+++ M G D Y +V+ K G+ KE + E+M+ G + +
Sbjct: 370 CKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNA 429
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN LI +CK +LE A ++ M + G D + LI G C+ G++ GA L +
Sbjct: 430 ITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQK 489
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
+++ G+ + + +N ++ + A +F M K D +TY +V CKA
Sbjct: 490 LDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAAN 549
Query: 358 LPSASKLLLSCLKSG 372
+ A L + G
Sbjct: 550 VDRAYVHLAEMVSKG 564
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 194/401 (48%), Gaps = 5/401 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++DA D + + RM AG++PD T+ I +L LL + E G
Sbjct: 16 IMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLPERG 75
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+Y +++ L+ G +A +F +M+ D+ P ATFN +L+ LC+ +
Sbjct: 76 CDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESG 135
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K G T NI I+GLC+ GRL A +++ + D+ AP+ +TY T+M+
Sbjct: 136 ALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAYIAPDVVTYNTLMRGL 194
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ K + + L M +G D F Y T+I + K L+EAT+ ++ + G D
Sbjct: 195 CKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDR 254
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y +LIN C EG +E A L +E + + + D + L+ GLC+ G I A +
Sbjct: 255 VTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNE 314
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M + G ++ YN +++ L K G I A V VK D FT+++M+ CK +
Sbjct: 315 MVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLK 374
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
L SA +L+ G+ +V++GL +G +E +
Sbjct: 375 LDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNE 415
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 172/368 (46%), Gaps = 5/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ A CQ +L ++ + G+S + T N I G L ++ L++ M +
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAY 179
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV +YN+LM L + K EA + + M+ P T+N +++G CK A
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + GFVP+ VTY LI GLC G + A + E P+ + Y +++K
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGL 299
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R L++++ M G D + Y VI K+G + +A M + G D+
Sbjct: 300 CRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDV 359
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++NT+I+ YCK KL++A L++ M G D T+ +++GLCKAG K E
Sbjct: 360 FTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEE 419
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G N YN +++ K +++ A V M V D+ ++++++H C+
Sbjct: 420 MILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGD 479
Query: 358 LPSASKLL 365
L A L
Sbjct: 480 LDGAYLLF 487
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 131/271 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ + ++N G PDV T+N++I G + L +L L++ M
Sbjct: 329 IVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMY 388
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD +YNS+++ L + GK E N F++MI P T+NI++ CK + A
Sbjct: 389 GIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEA 448
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + G VP+ +++N LI G C+ G L A + ++L + G++ A T+ ++
Sbjct: 449 SGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGA 508
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ +I M KGY D + Y ++ K + A ++ +MV+ G
Sbjct: 509 YSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPS 568
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+ ++ ++N ++ A ++ M + G
Sbjct: 569 MATFGRVLNSLAMNHRVSEAVAIIHIMVRMG 599
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 124/266 (46%), Gaps = 7/266 (2%)
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKL 189
G P YN ++ L A + + +G AP+A T+T +K C R + +
Sbjct: 5 GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPH-V 63
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
L +L ++ +G YCTV+ G +A ++M+ V D+ ++N +++
Sbjct: 64 ALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLH 123
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
C++G + + LL ++ K+G +K+T I I GLC+ G ++ A +E M+
Sbjct: 124 ALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAP 182
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
++ YN ++ L KD K+ A M + D FTY++++ CK L A++LL
Sbjct: 183 DVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELL 242
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSG 391
+ G + ++++GL G
Sbjct: 243 KDAIFKGFVPDRVTYCSLINGLCAEG 268
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 185/362 (51%), Gaps = 4/362 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + M GI PDVVT+N+L+ R + ++ +L+EM G+ PD ++ +LM
Sbjct: 167 SVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGF 226
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ G + A RV M+ + T N+++NG CK ++AL + GF P+
Sbjct: 227 VEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQ 286
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+TYN + GLC+ + A ++ + GH P+ TY ++ C +N + + IL+
Sbjct: 287 ITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQ 346
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M +G D + T+IAA RL+EA D Q+ GV D+ ++N LIN CK G
Sbjct: 347 MVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGD 406
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
A L +EM+ G D+ T+ LID LC G + A L+ M G + YN
Sbjct: 407 PHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNT 466
Query: 317 IVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
I+D L K +I+ A VF+ M++ +++ T+++++ LCK K++ A L+ + G
Sbjct: 467 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEG 526
Query: 373 VR 374
++
Sbjct: 527 LQ 528
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 201/401 (50%), Gaps = 5/401 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ + + + G PD +TYN+ + G +N + +L ++D M++
Sbjct: 256 VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE 315
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV++YN +++CL + G+ +EA + M+ P TFN ++ LC + A
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + R + G P++ T+NILI LCK G A + +E+ +SG P+ +TY T++
Sbjct: 376 LDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDN 435
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K L++L M+ G Y T+I K R++EA + +QM G+ +
Sbjct: 436 LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 495
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++NTLI+ CK+ K++ A+ L+++M +G + + T+ ++ CK G+IK A LE
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 555
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M GF+ ++ Y +++ L K G+ A+ V M +K Y+ ++ +L +
Sbjct: 556 TMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRN 615
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGL-RHSGCRREA 396
+ A L + G K V GL R G +EA
Sbjct: 616 NIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEA 656
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 201/408 (49%), Gaps = 4/408 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A C+ +L M G++PD T+ +L+ G + +L + MLEMG
Sbjct: 187 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ N L++ +LG+ ++A Q I P T+N +NGLC+N + +AL
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + + G P++ TYNI++ LCK G+L A+ IL ++ D G P+ T+ T++
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + L++ + KG + D + + +I A K+G A E+M G D
Sbjct: 367 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 426
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTLI+ C GKL A LL +ME G T+ +IDGLCK I+ A +
Sbjct: 427 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M+ G N +N ++D L KD KID A + M + ++ TY+S++ + CK
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGD 546
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
+ A+ +L + +G + +++GL +G + A K+ +R+
Sbjct: 547 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI 594
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 185/381 (48%), Gaps = 7/381 (1%)
Query: 13 DAGYTILNRMREA-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
DA ILN+++ GI D V YN L+ S + + EM GI PDV ++N+
Sbjct: 127 DAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 186
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM L + + A + ++M + P TF ++ G + + ALR+ + + G
Sbjct: 187 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246
Query: 132 FVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
VT N+LI G CK GR+ A +I +E+ D G P+ ITY T + +N
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHA 305
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
L+++ M ++G+ D F Y V+ K G+L+EA + QMV G DI ++NTLI
Sbjct: 306 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 365
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
C +LE A L ++ +G D YT ILI+ LCK G+ A E M G +
Sbjct: 366 LCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPD 425
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLL 366
YN ++D L GK+ A+++ + ME + + TY++++ LCK R+ A ++
Sbjct: 426 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485
Query: 367 SCLKSGVRILKSAQKAVVDGL 387
G+ ++DGL
Sbjct: 486 QMDLQGISRNAITFNTLIDGL 506
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 124/283 (43%), Gaps = 36/283 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+A C+ + M+ +G +PD VTYN+LI L +LDLL +M
Sbjct: 396 ILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST 455
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +YN+++ L + + +EA VF M ++ TFN +++GLCK++ D+A
Sbjct: 456 GCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDA 515
Query: 121 LRMF-----RGLQKH------------------------------GFVPELVTYNILIKG 145
+ GLQ + GF ++VTY LI G
Sbjct: 516 FGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLING 575
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCKAGR + A +L+ + G P Y +++ FR + L + M G D
Sbjct: 576 LCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPD 635
Query: 206 GFGYCTVIAAFVKIG-RLKEATDYMEQMVTDGVQLDIVSYNTL 247
Y V + G +KEA D+M +MV G + S+ L
Sbjct: 636 ALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRML 678
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 128/308 (41%), Gaps = 42/308 (13%)
Query: 107 MLNGLCKNRYTDNALRMFRG-LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
+L L + D ALRM L + F P Y +I+ L G L + ++ E+
Sbjct: 44 LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRRE 103
Query: 166 GH-------------------------------------APNAITYTTIMKCCFRNRKYK 188
GH + + Y ++ K K
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
L + S M +G D + T++ A + +++ A +E+M + GV D ++ TL+
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLM 223
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
+ +EG +EAA + M + G K T +LI+G CK G ++ A +++ GF+
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE 283
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKL 364
+ YN V+ L ++ + HA+ V + M D FTY+ +V+ LCK +L A +
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343
Query: 365 LLSCLKSG 372
L + G
Sbjct: 344 LNQMVDRG 351
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 36/185 (19%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ D + ++N+M G+ P+ +TYNS++ + + + D+L+ M G
Sbjct: 502 LIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
DV +Y +L++ L + G+ A +V + M + P +N +L L + +AL
Sbjct: 562 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 621
Query: 122 RMFRGLQK------------------------------------HGFVPELVTYNILIKG 145
+FR + + GF+PE ++ +L +G
Sbjct: 622 SLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681
Query: 146 LCKAG 150
L G
Sbjct: 682 LLNLG 686
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 191/377 (50%), Gaps = 4/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++IDA C+ + ++ +M E G PDVVTYN+++ G ++ + +L L +EM +
Sbjct: 85 VIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERL 144
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ S+N+++ L Q K D+A +VF +M D+ P + ++ I+++GL K + A
Sbjct: 145 GCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEA 204
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++FR + G P VTYN++I G+C A L A + K + G P+ T+ ++
Sbjct: 205 YKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDA 264
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K +L M G+ D Y T+I+ I R+ +A +E MV +
Sbjct: 265 HCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPT 324
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+ NTLI+ CK G+++ A +LD M G D T+ L+ G C+AG + AR L
Sbjct: 325 VVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLS 384
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M G N+ Y +V L K ++ A VF M+ + FTY++++ C A
Sbjct: 385 DMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAG 444
Query: 357 RLPSASKLLLSCLKSGV 373
++ KL + +G+
Sbjct: 445 QVDGGLKLFGEMVCAGI 461
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 181/376 (48%), Gaps = 8/376 (2%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M E +SPD +Y LI G + L+ + DL ++L G+ P +Y SL+H L
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
D+A +F DM P T+N++++ CK + A + + + + G VP++VTYN
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
++ GLCK+GR+ A + E+ G PN ++ TI+ + K ++ M+ +
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
D + Y +I K G+L EA +M+ G+ V+YN +I+ C L+ A
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
L M +G ++T ILID CK G + A L+ M G ++ Y+ ++ L
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300
Query: 322 GKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
++D A ++ E M + T ++++H LCKA R+ A ++L + + SG +
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG----Q 356
Query: 378 SAQKAVVDGLRHSGCR 393
S + L H CR
Sbjct: 357 SPDVVTYNTLVHGHCR 372
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 190/411 (46%), Gaps = 39/411 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID + + + ++ +G++P V Y SLI G + + +L +M
Sbjct: 15 ILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRR 74
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PP +YN ++ + G +EA + + MI P T+N +++GLCK+ + A
Sbjct: 75 GCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEA 134
Query: 121 LRMFRGLQKHG-----------------------------------FVPELVTYNILIKG 145
L +F +++ G P+ +Y ILI G
Sbjct: 135 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDG 194
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
L KAG+L A + + + DSG P+A+TY ++ LE+ +M+ KG
Sbjct: 195 LAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPS 254
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
F + +I A K G++ EA +++M DG D+V+Y+TLI+ C +++ A LL+
Sbjct: 255 RFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 314
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+M K+ + T LI GLCKAG IK AR L+ M G ++ YN +V + G
Sbjct: 315 DMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 374
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
+ + A + M + + TY+++V LCKA RLP A + SG
Sbjct: 375 QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG 425
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 198/443 (44%), Gaps = 41/443 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D C+ + + N M G +P+ ++N++I G + S + + + EM
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC--------- 112
IPPD WSY L+ L + GK +EA ++F+ M+ +TP T+N++++G+C
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240
Query: 113 ------------KNRYT--------------DNALRMFRGLQKHGFVPELVTYNILIKGL 146
+R+T D A R+ + + G VP++VTY+ LI GL
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C R+ AR +L+++ P +T T++ + + K E+L AM G + D
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T++ + G+ + A + + MV G+ ++V+Y L++ CK +L A + +
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+ G + +T+T LI G C AG + G M G + Y + L K G+
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR 480
Query: 327 IDHAINVF----ESM--EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
A+ + ES+ E Y V L A ++ A + ++ G
Sbjct: 481 SARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERC 540
Query: 381 KAVVDGLRHSGCRREAKKIQSKI 403
++V GL SG EA+ + +I
Sbjct: 541 ASLVAGLCKSGQGGEARAVLEEI 563
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 179/375 (47%), Gaps = 14/375 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID + + Y + RM ++GI+P VTYN +I G L +L+L M
Sbjct: 190 ILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK 249
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +++N L+ + GK DEA R+ + M P T++ +++GLC D+A
Sbjct: 250 GCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 309
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K P +VT N LI GLCKAGR++ AR +L + SG +P+ +TY T++
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + + E+LS M +G + Y +++ K RL EA QM + G +
Sbjct: 370 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 429
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +Y LI +C G+++ L EM G D + L LCK+G + AR LE
Sbjct: 430 LFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSG--RSAR-ALE 486
Query: 301 YMNKIGFDS------NLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVH 350
+ + G +S E Y VD L GK++ A+ M ++ +S+V
Sbjct: 487 ILRE-GRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVA 545
Query: 351 NLCKAKRLPSASKLL 365
LCK+ + A +L
Sbjct: 546 GLCKSGQGGEARAVL 560
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 164/337 (48%), Gaps = 8/337 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDA+C+ D + +L RM + G PDVVTY++LI+G + + + LL++M++
Sbjct: 260 ILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKR 319
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P V + N+L+H L + G+ EA V M+ +P T+N +++G C+ T+ A
Sbjct: 320 QCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERA 379
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P +VTY L+ GLCKA RL A + ++ SG APN TYT ++
Sbjct: 380 RELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILG 439
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM----EQMVTDG 236
+ GL++ M G + D Y T+ A K GR A + + E + ++
Sbjct: 440 FCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEA 499
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
++ Y ++ GK+E A + +M + G L+ GLCK+G AR
Sbjct: 500 WGDEV--YRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEAR 557
Query: 297 LHLEYMNKIGFDSNL--EAYNCIVDRLGKDGKIDHAI 331
LE + + + +A + + +GK +I+ +
Sbjct: 558 AVLEEIMDLAYGGKARGKAAKFVEEMVGKGYEIEDGV 594
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 192/359 (53%), Gaps = 3/359 (0%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
++ ++ G +P + TYN+L+ G + L ++DLL ++++ G PDV +Y SL+ L
Sbjct: 187 LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLG 246
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ + EA ++F++M L T + ++ GL + A +++ + G VP++V
Sbjct: 247 KEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVV 306
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T + +I GLCKAGR+ A I K + G APN + Y+ ++ + RK LE+L+ M
Sbjct: 307 TLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 366
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K+ T D Y +I K G ++ A + ++M+ G + D+ +YN L++ +CK G
Sbjct: 367 KKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNT 426
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+AA + D+M + T+ LI GLCK + A L+ ++M + G + Y+ +
Sbjct: 427 DAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSL 486
Query: 318 VDRLGKDGKIDHAINVFESME---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
VD L K GK++ +F+ ME V +S T + ++ +LCKA R+ A L + K G+
Sbjct: 487 VDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM 545
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 189/396 (47%), Gaps = 5/396 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREA-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
+LI YC + + ++ M E G++P + T+N ++ G ++ + ++D +
Sbjct: 99 VLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTT 158
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G D+ +Y +++ L + K +A + + + TP AT+N +LNGLCK +
Sbjct: 159 NGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEE 218
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+ + R + +G P++VTY LI GL K R A + KE+ G + + YT +++
Sbjct: 219 AIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIR 278
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ K + M +G D T+I K GR+ A + M G+
Sbjct: 279 GLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAP 338
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ V Y+ LI+ CK K++ A +L +M+K D T+ ILIDGLCK+G+++ AR
Sbjct: 339 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFF 398
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ M + G ++ YN +V K G D A VF+ M + TY +++ LCK
Sbjct: 399 DEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKR 458
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
++L AS + G ++VDGL SG
Sbjct: 459 RQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSG 494
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 181/365 (49%), Gaps = 4/365 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ + +L ++ + G +PDVVTY SLI G + + L EM G
Sbjct: 206 LLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRG 265
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D Y +L+ L Q GK +A+ V++ M P T + M++GLCK A+
Sbjct: 266 LVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAV 325
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+F+ ++ G P V Y+ LI GLCKA ++ A +L ++ + P+ ITY ++
Sbjct: 326 RIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGL 385
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + M G D + Y +++ F K G A + M + ++
Sbjct: 386 CKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNV 445
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y TLI+ CK +L A L M+++G D + ++ L+DGLCK+G ++G + +
Sbjct: 446 VTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDE 505
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYSSMVHNLCKAKRL 358
M + G +N + ++ L K ++D A+++F ++ + + Y+S++ L K+ ++
Sbjct: 506 MERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISTLIKSAKV 564
Query: 359 PSASK 363
++
Sbjct: 565 NPCTR 569
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 170/337 (50%), Gaps = 5/337 (1%)
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G V + N+L+ + + EA + ++ + P T+N+++ G C R +
Sbjct: 53 FGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEE 112
Query: 120 ALRMFRGLQK-HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A + R +++ +G P L T+N+++ GLCK+G++ A + +G + TYT I+
Sbjct: 113 AFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIV 172
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+N+K + + ++ + G T Y ++ K+GRL+EA D + ++V +G
Sbjct: 173 DWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT 232
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D+V+Y +LI+ KE + AY L EM +G D +T LI GL +AG I A
Sbjct: 233 PDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSV 292
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
+ M G ++ + ++D L K G+I A+ +F+SME + + YS+++H LCK
Sbjct: 293 YKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK 352
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
A+++ A ++L K+ ++DGL SG
Sbjct: 353 ARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG 389
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 5/189 (2%)
Query: 216 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ-GFEC 274
F + R +EA + ++ + D+ ++N LI YC + E A+ ++ EME+ G
Sbjct: 69 FARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAP 128
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
TH +++ GLCK+G + A H E G ++ Y IVD L K+ KI A+ +
Sbjct: 129 SLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALM 188
Query: 335 ESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
E + TY+++++ LCK RL A LL + +G +++DGL
Sbjct: 189 EKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKE 248
Query: 391 GCRREAKKI 399
EA K+
Sbjct: 249 KRSFEAYKL 257
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 37/226 (16%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ +A + M EAG PDV TYN L++G + + + D+M
Sbjct: 380 ILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSS 439
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+V +Y +L ++GLCK R A
Sbjct: 440 HCSPNVVTYGTL-----------------------------------ISGLCKRRQLTKA 464
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
F+ +++ G P+ Y+ L+ GLCK+G+L + E+ SG A + I
Sbjct: 465 SLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHL 524
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
C NR + + + +A++++G + Y ++I+ +K ++ T
Sbjct: 525 CKANRVDE-AVSLFNAIRKEGMPHP-YAYNSIISTLIKSAKVNPCT 568
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 195/378 (51%), Gaps = 5/378 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL-LSCSLDLLDEMLE 59
+++ +Y + D +I++ + G P V++YN+++ R+ +S + ++ EMLE
Sbjct: 139 LVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLE 198
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ P+V++YN L+ G D A +F M P T+N +++G CK R D+
Sbjct: 199 SQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDD 258
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
++ R + G P L++YN++I GLC+ GR++ ++L E+ G++ + +TY T++K
Sbjct: 259 GFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIK 318
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + L + + M R G T Y ++I + K G + A ++++QM G+
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCP 378
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ +Y TL++ + ++G + AY +L EM GF T+ LI+G C G ++ A L
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVL 438
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
E M + G ++ +Y+ ++ + +D A+ V M K D+ TYSS++ C+
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ 498
Query: 356 KRLPSASKLLLSCLKSGV 373
+R A L L+ G+
Sbjct: 499 RRTKEACDLYEEMLRVGL 516
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/401 (30%), Positives = 191/401 (47%), Gaps = 19/401 (4%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L M G S D VTYN+LI G + +L + EML G+ P V +Y SL+H +
Sbjct: 297 VLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMC 356
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G + A M L P T+ +++G + Y + A R+ R + +GF P +V
Sbjct: 357 KAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV 416
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN LI G C G++ A +L+++ + G +P+ ++Y+T++ R+ L + M
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
KG D Y ++I F + R KEA D E+M+ G+ D +Y LIN YC EG L
Sbjct: 477 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDL 536
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR---LHLEYMNKIGFD------ 308
E A L +EM ++G D T+++LI+GL K + A+ L L Y + D
Sbjct: 537 EKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 596
Query: 309 ----SNLEAYNCI--VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 358
SN+E + + + G + A VFESM K D Y+ M+H C+A +
Sbjct: 597 IENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDI 656
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
A L +KSG + A+V L G E +
Sbjct: 657 RKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 196/391 (50%), Gaps = 6/391 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ M E+ +SP+V TYN LI G + +L L D+M G P+V +YN+L+
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+L K D+ ++ + M L P ++N+++NGLC+ + + + G+ + V
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN LIKG CK G A + E+ G P+ ITYT+++ + +E L M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ +G + Y T++ F + G + EA + +M +G +V+YN LIN +C GK+
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNC 316
E A +L++M+++G D +++ ++ G C++ ++ A R+ E + K G + Y+
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK-GIKPDTITYSS 490
Query: 317 IVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++ + + A +++E M D FTY+++++ C L A +L ++ G
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
V +++GL REAK++ K+
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 180/355 (50%), Gaps = 6/355 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ D G+ +L M G+ P++++YN +I G R + +L EM G
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
D +YN+L+ + G +A + +M+ LTP T+ +++ +CK + A+
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ G P TY L+ G + G + A +L+E+ D+G +P+ +TY ++
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K + + +L MK KG + D Y TV++ F + + EA +MV G++ D
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLE 300
++Y++LI +C++ + + A L +EM + G D++T+T LI+ C G+++ A +LH E
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHN 351
+ K G ++ Y+ +++ L K + A + +F V TY +++ N
Sbjct: 546 MVEK-GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 149/343 (43%), Gaps = 40/343 (11%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV----------------------- 137
++ F++++ + D AL + Q HGF+P ++
Sbjct: 134 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193
Query: 138 -------------TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
TYNILI+G C AG + A + ++ G PN +TY T++ +
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
RK G ++L +M KG + Y VI + GR+KE + + +M G LD V+Y
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
NTLI YCKEG A ++ EM + G T+T LI +CKAGN+ A L+ M
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPS 360
G N Y +VD + G ++ A V M TY+++++ C ++
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A +L + G+ + V+ G S EA +++ ++
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 124/286 (43%), Gaps = 15/286 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ +C+ D + M E GI PD +TY+SLI G + DL +EML +G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+PPD ++Y +L++ G ++A ++ +M+ + P T+++++NGL K T A
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 122 RMFRGLQKHGFVPELVTYNILI---------------KGLCKAGRLRTARWILKELGDSG 166
R+ L VP VTY+ LI KG C G + A + + +
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN 635
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
H P+ Y ++ R + + M + G+ ++ A K G++ E
Sbjct: 636 HKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELN 695
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
+ ++ + L+ + +EG ++ +L EM K GF
Sbjct: 696 SVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGF 741
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 15/222 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-EM 60
LI+AYC + + N M E G+ PDVVTY+ LI G + S + LL ++ E
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585
Query: 61 GIPPDVWSYNSLMHC--------------LFQLGKPDEANRVFQDMICGDLTPCTATFNI 106
+P DV + + +C G EA++VF+ M+ + P +NI
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNI 645
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
M++G C+ A +++ + K GF+ VT L+K L K G++ ++ + S
Sbjct: 646 MIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSC 705
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
A +++ R + L++L+ M + G+ +G
Sbjct: 706 ELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 179/368 (48%), Gaps = 4/368 (1%)
Query: 9 FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 68
F + D + NRM P V +N L+ + L ++M GIPPDV++
Sbjct: 45 FNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYT 104
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
N L++ L +P A V ++ L P TATF ++ GLC +AL +F +
Sbjct: 105 LNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMI 164
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
GF P +VTY LI GLCK G A +L+ + P+ + YT+I+ ++R+
Sbjct: 165 GEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVT 224
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
+ S M +G + D F Y ++I + + K T + QM+ + D+V ++T++
Sbjct: 225 EAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVV 284
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
+ CKEGK+ A+ ++D M +G E + T+ L+DG C + A + M G+
Sbjct: 285 DALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYA 344
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKL 364
N+ +YN +++ K ++D A +FE M + ++ TY++++H LC RL A L
Sbjct: 345 PNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIAL 404
Query: 365 LLSCLKSG 372
+ G
Sbjct: 405 FHEMVAHG 412
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 193/392 (49%), Gaps = 4/392 (1%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
+++ N+M GI PDV T N LI + + +L ++L++G+ PD ++ +L+
Sbjct: 87 FSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRG 146
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
L GK +A +F MI P T+ ++NGLCK T+ A+R+ R +++ P+
Sbjct: 147 LCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPD 206
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
+V Y +I LCK ++ A + ++ G +P+ TYT+++ ++K +L+
Sbjct: 207 VVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLN 266
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M D + TV+ A K G++ EA D ++ M+ GV+ ++V+YN L++ +C +
Sbjct: 267 QMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQS 326
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
+++ A + D M G+ + ++ LI+G CK + A E M + N YN
Sbjct: 327 EMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYN 386
Query: 316 CIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++ L G++ AI +F M ++ D TY ++ LCK L A LL + S
Sbjct: 387 TLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGS 446
Query: 372 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ V+DG+ +G A+ I S +
Sbjct: 447 NMDPDIQIYTIVIDGMCRAGELEAARDIFSNL 478
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 190/405 (46%), Gaps = 39/405 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+++C +++L ++ + G+ PD T+ +LI G + +L L D+M+
Sbjct: 107 ILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGE 166
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V +Y +L++ L ++G + A R+ + M G+ P + +++ LCK+R A
Sbjct: 167 GFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEA 226
Query: 121 LRMFRGLQKHGFVPELVTYNILIK-----------------------------------G 145
+F + G P++ TY LI
Sbjct: 227 FNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDA 286
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCK G++ A ++ + G PN +TY +M + +++ M GY +
Sbjct: 287 LCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPN 346
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y T+I + KI R+ +AT E+M + + V+YNTL++ C G+L+ A L
Sbjct: 347 VISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFH 406
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM G D T+ IL+D LCK ++ A L+ + D +++ Y ++D + + G
Sbjct: 407 EMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAG 466
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
+++ A ++F ++ K + TY+ M++ LC+ L A+KL +
Sbjct: 467 ELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFM 511
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 174/368 (47%), Gaps = 4/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID+ C+ + + ++M GISPD+ TY SLI LL++M+
Sbjct: 213 IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK 272
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV +++++ L + GK EA+ V MI + P T+N +++G C D A+
Sbjct: 273 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAV 332
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + +G+ P +++YN LI G CK R+ A ++ +E+ PN +TY T+M
Sbjct: 333 KVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGL 392
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + + M G D Y ++ K L EA ++ + + DI
Sbjct: 393 CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDI 452
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
Y +I+ C+ G+LEAA + + +G + T+TI+I+GLC+ G + A
Sbjct: 453 QIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFME 512
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M+ G + YN I L ++ + AI + + M + D T + +V LC K
Sbjct: 513 MDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKL 572
Query: 358 LPSASKLL 365
S ++L
Sbjct: 573 DQSVKQIL 580
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 129/265 (48%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D +C D + + M G +P+V++YN+LI G + + + L +EM +
Sbjct: 318 LMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKE 377
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +YN+LMH L +G+ +A +F +M+ P AT+ I+L+ LCK + D A+
Sbjct: 378 LIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAM 437
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + ++ P++ Y I+I G+C+AG L AR I L G PN TYT ++
Sbjct: 438 ALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGL 497
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R ++ M G + DG Y T+ ++ A +++M+ G D+
Sbjct: 498 CRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADV 557
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDE 266
+ L+ + C + ++ +L E
Sbjct: 558 STTTLLVEMLCDDKLDQSVKQILSE 582
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 81/162 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ D +L + + + PD+ Y +I G R L + D+ +
Sbjct: 422 ILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSK 481
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V +Y +++ L + G DEAN++F +M +P T+N + GL +N+ A
Sbjct: 482 GLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRA 541
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
+++ + + GF ++ T +L++ LC ++ + IL E
Sbjct: 542 IQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEF 583
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 206/425 (48%), Gaps = 39/425 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ + D + + +RM + G P+ VTY++LI G + +LD+L+EM+E G
Sbjct: 281 LILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG 340
Query: 62 IPPDVWSYN-----------------------------------SLMHCLFQLGKPDEAN 86
I P V++Y +L+ L +LGK + A
Sbjct: 341 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI 400
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
++ M+ L P T T+N ++N LC AL++F ++ HG + TYN +IKGL
Sbjct: 401 GLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGL 460
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C G + A + +++ G P +TY T++ +L MK G D
Sbjct: 461 CLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDE 520
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ Y +++ F K G+L+ A+ Y ++MV G+ + VSY TLI+ + K+GK++ A LL+
Sbjct: 521 WTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLER 580
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
ME+ G + ++ +I+GL K A + M + G N+ Y ++D L ++G+
Sbjct: 581 MEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGR 640
Query: 327 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
A +F ME + + +TYSS+++ LC+ + A LL + G+ + +
Sbjct: 641 TQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTS 700
Query: 383 VVDGL 387
++DG
Sbjct: 701 LIDGF 705
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 198/386 (51%), Gaps = 4/386 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
IL+++ + +SPDV TY SLI G RN L + + D M++ G P+ +Y++L++ L
Sbjct: 262 ILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLC 321
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
G+ DEA + ++MI + P T+ + + LC + + A+ + ++K G P +
Sbjct: 322 NEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQ 381
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY LI GL + G+L A + ++ G PN +TY ++ ++ L+I M
Sbjct: 382 TYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWM 441
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ G + Y +I G +++A E+M+ G +V+YNTLIN Y +G +
Sbjct: 442 EGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNV 501
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A LLD M++ G E D++T+ L+ G K G ++ A + + M + G + N +Y +
Sbjct: 502 NNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTL 561
Query: 318 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+D KDGK+D A+++ E ME + +Y+++++ L K R A K+ + G+
Sbjct: 562 IDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGL 621
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKI 399
++DGL +G + A KI
Sbjct: 622 LPNVITYTTLIDGLCRNGRTQFAFKI 647
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 186/378 (49%), Gaps = 4/378 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
LN + G + + N+L+ + ++ + +L +ML GI P + ++N+L++ L
Sbjct: 192 FLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILS 251
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ GK EA + + DL+P T+ ++ G C+NR D A +F + K G P V
Sbjct: 252 KKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSV 311
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY+ LI GLC GR+ A +L+E+ + G P TYT + + +E+++ M
Sbjct: 312 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 371
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K++G + Y +I+ ++G+L+ A +M+ +G+ + V+YN LIN C G+
Sbjct: 372 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 431
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A + ME G + T+ +I GLC G+I+ A + E M K+G + YN +
Sbjct: 432 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 491
Query: 318 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
++ G +++A + + M+ D +TY+ +V K +L SAS ++ G+
Sbjct: 492 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 551
Query: 374 RILKSAQKAVVDGLRHSG 391
+ ++DG G
Sbjct: 552 NPNPVSYTTLIDGHSKDG 569
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 197/453 (43%), Gaps = 63/453 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C + + +M + G P VVTYN+LI G ++ + LLD M E G
Sbjct: 456 IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG 515
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD W+YN L+ + GK + A+ FQ+M+ L P ++ +++G K+ D AL
Sbjct: 516 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIAL 575
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ +++ G P + +YN +I GL K R A I ++ + G PN ITYTT++
Sbjct: 576 SLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGL 635
Query: 182 FRNRKYKLGLEI-----------------------------------LSAMKRKGYTFDG 206
RN + + +I L M+RKG D
Sbjct: 636 CRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDE 695
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL--------- 257
+ ++I FV +GR+ A + +MV G + + +Y+ L+ KE L
Sbjct: 696 VTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQH 755
Query: 258 EAAYL---------------LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
EA Y LL M + G E T++ L+ GLC+ G A ++ M
Sbjct: 756 EAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDM 815
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 358
+ GF + E Y ++ K+ ++DHA+ +F S+E K Y +++ LCKA ++
Sbjct: 816 KERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQV 875
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
A L + L+ + +VDGL G
Sbjct: 876 EEAQALFDNMLEKEWNADEIVWTVLVDGLLKEG 908
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 166/336 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + + + ++M + G+ P+ VTYN+LI S +L + M G
Sbjct: 386 LISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHG 445
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ +YN ++ L G ++A +F+ M+ P T+N ++NG +NA
Sbjct: 446 SLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAA 505
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ ++++G P+ TYN L+ G K G+L +A + +E+ + G PN ++YTT++
Sbjct: 506 RLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGH 565
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ K + L +L M+ G + Y VI K R EA ++M G+ ++
Sbjct: 566 SKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNV 625
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y TLI+ C+ G+ + A+ + +MEK+ + YT++ LI GLC+ G A + L+
Sbjct: 626 ITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKE 685
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M + G + + ++D G+IDHA + M
Sbjct: 686 MERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRM 721
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 198/461 (42%), Gaps = 98/461 (21%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
I A C + ++ RM++ G P+V TY +LI+G +R L ++ L +ML+ G+
Sbjct: 352 ITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL 411
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDM------------------IC--GDLT---- 98
P+ +YN+L++ L G+ A ++F M +C GD+
Sbjct: 412 VPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV 471
Query: 99 -----------PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
P T+N ++NG +NA R+ ++++G P+ TYN L+ G
Sbjct: 472 LFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFS 531
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K G+L +A + +E+ + G PN ++YTT++ ++ K + L +L M+ G +
Sbjct: 532 KWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVE 591
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI------------------- 248
Y VI K R EA ++M G+ ++++Y TLI
Sbjct: 592 SYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDM 651
Query: 249 -------NLY---------CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
NLY C+EGK + A +LL EME++G D+ T T LIDG G I
Sbjct: 652 EKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRI 711
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD-------GKIDH-AINVFESMEVKDSF- 343
A L L M +G N Y+ ++ L K+ + H A+ F E +F
Sbjct: 712 DHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFE 771
Query: 344 -------------------TYSSMVHNLCKAKRLPSASKLL 365
TYS++V LC+ R A +L+
Sbjct: 772 IVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLV 812
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 152/339 (44%), Gaps = 24/339 (7%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F I ++M E G+ P+V+TY +LI G RN + + +M + P++++Y+S
Sbjct: 606 FSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSS 665
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
L++ L Q GK DEA + ++M L P TF +++G D+A + R + G
Sbjct: 666 LIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVG 725
Query: 132 FVPELVTYNILIKGLCKAGRLRTARW------------------------ILKELGDSGH 167
P TY++L+KGL K L + +L + + G
Sbjct: 726 CKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGC 785
Query: 168 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
P TY+T++ R ++ +++ MK +G+ D Y +++ A K + A
Sbjct: 786 EPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALK 845
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
+ G QL + Y LI CK G++E A L D M ++ + D+ T+L+DGL
Sbjct: 846 IFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLL 905
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
K G + L M F N++ Y + L + GK
Sbjct: 906 KEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGK 944
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 112/232 (48%), Gaps = 4/232 (1%)
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
D AP ++K C + + + L+ + G+ F + T++ K ++
Sbjct: 163 DRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVE 222
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A + +QM+ G+Q ++++NTLIN+ K+GK+ A L+L ++ + D +T+T LI
Sbjct: 223 GARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLI 282
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
G C+ N+ A + M K G D N Y+ +++ L +G++D A+++ E M K
Sbjct: 283 LGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIE 342
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+TY+ + LC + A +L+ K G R A++ GL G
Sbjct: 343 PTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLG 394
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 35/177 (19%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
V+F+ +L RM E G P + TY++L++G R + L+ +M E G PD Y
Sbjct: 768 VNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIY 827
Query: 70 NSLM--HCL------------------FQL---------------GKPDEANRVFQDMIC 94
SL+ HC FQL G+ +EA +F +M+
Sbjct: 828 YSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLE 887
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
+ + ++++GL K D +++ ++ F P + TY IL + L + G+
Sbjct: 888 KEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGK 944
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 200/407 (49%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+AYC+ FD +L MRE G + VTYN LIAG R+ + + +M + G
Sbjct: 250 LIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG 309
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD ++Y +L++ L + + +EA + +M C +L P + +++G + D A
Sbjct: 310 LVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 369
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+M + + G P +TY+ L++GLCK G++ A +LK++ H P+ ITY I++
Sbjct: 370 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGH 429
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
FR+ K +LS M+ G + + + Y +I + G ++A+D +E+M T G++ +
Sbjct: 430 FRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 489
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
Y LI+ YC+EG + A + D+M K D Y + LI GL K G ++ + +
Sbjct: 490 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 549
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
M + G N Y+ ++ K+G ++ A + + M + Y ++ + K+
Sbjct: 550 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 609
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ S S L GV + ++ L SG A ++ S I
Sbjct: 610 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIE 656
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 188/376 (50%), Gaps = 4/376 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ D +L +M PD +TYN +I G R+ + LL EM G
Sbjct: 390 LVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAG 449
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V++Y+ ++H L Q G+P++A+ + ++M L P + +++G C+ A
Sbjct: 450 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLAC 509
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + K +P+L YN LI GL K GR+ + ++ + G PN TY+ ++
Sbjct: 510 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 569
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N + +++ M G + Y ++ ++ K +++ + + M+ GV LD
Sbjct: 570 LKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDN 629
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
Y LI+ G +EAA+ +L +EK G D + ++ LI GLCK + + A L+
Sbjct: 630 RIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDE 689
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M+K G D N+ YN ++D L K G I +A NVF S+ K + TY+S++ CK
Sbjct: 690 MSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGD 749
Query: 358 LPSASKLLLSCLKSGV 373
+ +A L L +G+
Sbjct: 750 ISNAFYLYNEMLATGI 765
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 194/406 (47%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ + +L+ M A + P+VV Y +LI G R + ++ EM+ G
Sbjct: 320 LINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAG 379
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +Y++L+ L ++G+ D A+ + + M+ P T T+N+++ G ++ +A
Sbjct: 380 VQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAF 439
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ ++ G P + TY+I+I GLC++G A +L+E+ G PNA Y ++
Sbjct: 440 RLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGY 499
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R L EI M + D + Y ++I K+GR++E+T Y QM G+ +
Sbjct: 500 CREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNE 559
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y+ LI+ Y K G LE+A L+ M G + + + L++ K+ +I+ +
Sbjct: 560 FTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKS 619
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G + Y ++ L G ++ A V +E V D YSS++ LCK
Sbjct: 620 MLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTAD 679
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A +L K GV A++DGL SG A+ + + I
Sbjct: 680 REKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 725
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 198/407 (48%), Gaps = 4/407 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D Y + ++ MR+ G++P + N+L+ R ++ + + M+
Sbjct: 179 VLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGA 238
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PDV++Y++L+ ++ + D A +V +M T T+N+++ GLC++ + A
Sbjct: 239 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 298
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++ +G VP+ TY LI GLCK+ R A+ +L E+ + PN + Y ++
Sbjct: 299 FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDG 358
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R +++ M G + Y ++ K+G++ A+ ++QMV D + D
Sbjct: 359 FMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD 418
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++YN +I + + + A+ LL EME G + YT++I+I GLC++G + A LE
Sbjct: 419 TITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 478
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M G N Y ++ ++G + A +F+ M + D + Y+S++ L K
Sbjct: 479 EMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVG 538
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
R+ ++K + G+ + ++ G +G A+++ ++
Sbjct: 539 RVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 585
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 188/403 (46%), Gaps = 5/403 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ + + S + +L+ M AGISP+V TY+ +I G ++ + DLL+EM
Sbjct: 424 LIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 483
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ + Y L+ + G A +F M ++ P +N ++ GL K + +
Sbjct: 484 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEES 543
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ F +Q+ G +P TY+ LI G K G L +A +++ + D+G PN + Y +++
Sbjct: 544 TKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLES 603
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F++ + +M +G D Y +I G ++ A + + +G D
Sbjct: 604 YFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPD 663
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ Y++LI+ CK E A+ +LDEM K+G + + + LIDGLCK+G+I AR
Sbjct: 664 VHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFN 723
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ G N Y ++D K G I +A ++ M D+F YS + A
Sbjct: 724 SILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAG 783
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L A L+ G + S +VDG G +E K+
Sbjct: 784 DLEQAMFLIEEMFLRGHASISSFNN-LVDGFCKRGKMQETLKL 825
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 156/343 (45%), Gaps = 5/343 (1%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
+M+E G+ P+ TY+ LI G +N L + L+ ML+ G+ P+ Y L+ F+
Sbjct: 549 QMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSD 608
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
++ + F+ M+ + + I+++ L + + A R+ G++K+G VP++ Y+
Sbjct: 609 DIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYS 668
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
LI GLCK A IL E+ G PN + Y ++ ++ + +++ K
Sbjct: 669 SLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK 728
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G + Y ++I K+G + A +M+ G+ D Y+ L G LE A
Sbjct: 729 GLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQA 788
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
L++EM +G + L+DG CK G ++ L + G N I+
Sbjct: 789 MFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISG 847
Query: 321 LGKDGKIDHAINVFESMEVKDSFT----YSSMVHNLCKAKRLP 359
L + GK+ +F ++ K S + +SS+ ++ ++P
Sbjct: 848 LSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP 890
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 162/390 (41%), Gaps = 54/390 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI Y + ++ ++ RM + G+ P+ V Y L+ ++ + ML+ G
Sbjct: 565 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 624
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D Y L+H L G + A RV + P ++ +++GLCK + A
Sbjct: 625 VMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAF 684
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K G P +V YN LI GLCK+G + AR + + G PN +TYT+++
Sbjct: 685 GILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGS 744
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + M G T D F Y + G L++A +E+M G I
Sbjct: 745 CKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASI 803
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK-------- 293
S+N L++ +CK GK++ LL + +G + T +I GL +AG +
Sbjct: 804 SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVE 863
Query: 294 --------GAR----LHLEYMN--KIGFD------------SNLE--------------- 312
AR L ++ +N KI D NL+
Sbjct: 864 LQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAP 923
Query: 313 ----AYNCIVDRLGKDGKIDHAINVFESME 338
+Y IVD L + GK+ A+N+ + M+
Sbjct: 924 MGCSSYLAIVDNLCRKGKLSEALNLLKEMD 953
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 159/347 (45%), Gaps = 23/347 (6%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
+ +A + +L+ + + G PDV Y+SLI+G + + + +LDEM + G+ P++ YN
Sbjct: 644 NMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYN 703
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+L+ L + G A VF ++ L P T+ +++G CK NA ++ +
Sbjct: 704 ALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLAT 763
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G P+ Y++L G AG L A ++++E+ GHA + + C R K +
Sbjct: 764 GITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRG-KMQET 822
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE--------------------ATDYME 230
L++L + +G + +I+ + G+L E ++ +M+
Sbjct: 823 LKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMD 882
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+ + LD+V + +I +CKEG L+ A +L D + + ++ ++D LC+ G
Sbjct: 883 MINQGKIPLDVV--DDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKG 940
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
+ A L+ M+K G + ++ L G I V ++M
Sbjct: 941 KLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLDNM 987
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 129/274 (47%), Gaps = 4/274 (1%)
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
++L+ K+GR++ A ++ + D G AP+ ++K R L ++ M
Sbjct: 178 DVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVG 237
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
G + D + Y T+I A+ K+ A + +M G L+ V+YN LI C+ G +E
Sbjct: 238 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 297
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A+ +ME G D +T+ LI+GLCK+ A+ L+ M+ N+ Y ++D
Sbjct: 298 AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLID 357
Query: 320 RLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
++G D A + + M + TY ++V LCK ++ AS LL ++ R
Sbjct: 358 GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 417
Query: 376 LKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+++G +++A ++ S++ A IS
Sbjct: 418 DTITYNLIIEGHFRHHSKKDAFRLLSEMENAGIS 451
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 133/301 (44%), Gaps = 18/301 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ + N + G+ P+ VTY SLI G+ + +S + L +EML G
Sbjct: 705 LIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATG 764
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD + Y+ L G ++A + ++M ++FN +++G CK L
Sbjct: 765 ITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETL 823
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + G VP +T +I GL +AG+L I EL A ++++
Sbjct: 824 KLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDM 883
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K+ L+++ M R +C K G L +A + +V +
Sbjct: 884 I--NQGKIPLDVVDDMIRD--------HC-------KEGNLDKALMLRDVIVAKSAPMGC 926
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
SY +++ C++GKL A LL EM+K+G + IL+ L +G I+ L+
Sbjct: 927 SSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLDN 986
Query: 302 M 302
M
Sbjct: 987 M 987
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 135/313 (43%), Gaps = 41/313 (13%)
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
A +++++ K+ +A + ++ G P + N L+K L +A + W ++E
Sbjct: 175 AVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAM-ALLWKVRE 233
Query: 162 -LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
+ +G +P+ TY+T+++ + R++ ++L M+ +G + Y +IA + G
Sbjct: 234 FMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSG 293
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK--------------------------- 253
++EA + + M G+ D +Y LIN CK
Sbjct: 294 AVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYA 353
Query: 254 --------EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
EG + A+ ++ EM G + +K T+ L+ GLCK G + A L L+ M +
Sbjct: 354 NLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRD 413
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 361
+ YN I++ + A + ME + +TYS M+H LC++ A
Sbjct: 414 SHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKA 473
Query: 362 SKLLLSCLKSGVR 374
S LL G++
Sbjct: 474 SDLLEEMTTKGLK 486
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/369 (30%), Positives = 185/369 (50%), Gaps = 4/369 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M+IDA C+ + + M AGI PDVV Y+SL+ G R L +L+ EM
Sbjct: 1090 MIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGR 1149
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI DV++YNSL+H L + G E M+ +P TF I+++GLCK A
Sbjct: 1150 GISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEA 1209
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ ++ G P+++TYN L+ GLC G+L A + + L D G N +Y ++
Sbjct: 1210 QQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILING 1269
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+++K M+ KG Y T+I A + GR++ A +M T G L
Sbjct: 1270 YCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLK 1329
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +Y L++ CK G LE A L ++K + + +IL+DG+C+AG ++ A +
Sbjct: 1330 LSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFD 1389
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
++K G + + AYN +++ L G + A+ + ME K DS T++ ++ NL K
Sbjct: 1390 EISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKEN 1449
Query: 357 RLPSASKLL 365
+ A +LL
Sbjct: 1450 EIHEAIQLL 1458
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 198/386 (51%), Gaps = 5/386 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + M + G+ D TY LI G + ++ L ++M + DV++Y ++ L
Sbjct: 1038 LFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYGMIIDALC 1096
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G EA +F +MI + P ++ +++GLC+ AL F+ ++ G ++
Sbjct: 1097 KDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVY 1156
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN LI GL +AG + W L + D G +P+A T+T ++ + K +IL M
Sbjct: 1157 TYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELM 1216
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ KG D Y T++ +G+L++AT E + G++L++ SYN LIN YCK+ K+
Sbjct: 1217 RHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKI 1276
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A+ +EM +G + T+ LI LC++G ++ A+ M G L Y +
Sbjct: 1277 DEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVL 1336
Query: 318 VDRLGKDGKIDHAINVFESM---EVKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+D L K+G ++ A+++F+S+ E K + +S ++ +C+A +L A K K+G+
Sbjct: 1337 LDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGL 1396
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKI 399
A +++GL + G EA K+
Sbjct: 1397 EPDTIAYNILINGLCNKGMLSEAVKL 1422
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 180/377 (47%), Gaps = 6/377 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+F M GIS DV TYNSLI G +R L L+ M++ G
Sbjct: 1126 LMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRG 1185
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +++ L+ L + GK EA ++ + M P T+N ++NGLC ++A
Sbjct: 1186 FSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDAT 1245
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F L G + +YNILI G CK ++ A +E+ G P+ +TY T++
Sbjct: 1246 KLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGAL 1305
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + + ++ M+ G YC ++ K G L+EA D + + + +I
Sbjct: 1306 CQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNI 1365
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++ L++ C+ GKLE A+ DE+ K G E D + ILI+GLC G + A L
Sbjct: 1366 EVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQ 1425
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHN--LCKAKRLP 359
M + G + +N I+ L K+ +I AI + E M ++ F+ V + LC A P
Sbjct: 1426 MEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRN-FSPDEAVTSMLLCLASFDP 1484
Query: 360 SASKLLLS---CLKSGV 373
L+S L+ GV
Sbjct: 1485 QWHAALVSLPNALQKGV 1501
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 176/347 (50%), Gaps = 4/347 (1%)
Query: 30 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 89
DV TY +I ++ + + +LD+ EM+ GI PDV Y+SLM L + G+ EA F
Sbjct: 1084 DVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFF 1143
Query: 90 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
++M ++ T+N +++GL + + GF P+ T+ ILI GLCK
Sbjct: 1144 KEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKE 1203
Query: 150 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 209
G++ A+ IL+ + G P+ +TY T+M + + ++ ++ +G + F Y
Sbjct: 1204 GKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSY 1263
Query: 210 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
+I + K ++ EA + E+M G++ V+YNTLI C+ G++ A L EM+
Sbjct: 1264 NILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQT 1323
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 329
G T+ +L+DGLCK G+++ A + + K N+E ++ ++D + + GK++
Sbjct: 1324 CGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEE 1383
Query: 330 AINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
A F+ + D+ Y+ +++ LC L A KLL + G
Sbjct: 1384 AWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 1430
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 195/394 (49%), Gaps = 7/394 (1%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
+ + ++ + GI PD+ T N LI + C + L+ G PD + +L+
Sbjct: 966 FPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKG 1025
Query: 76 LF-QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
++ + G PD A ++F +M L T+ I++NGLCK R T A+++ + K
Sbjct: 1026 VWMENGIPD-AVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKG 1083
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
++ TY ++I LCK G A + E+ +G P+ + Y+++M R + K LE
Sbjct: 1084 DVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFF 1143
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
M+ +G + D + Y ++I + G KE T ++ MV G D ++ LI+ CKE
Sbjct: 1144 KEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKE 1203
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
GK+ A +L+ M +G E D T+ L++GLC G ++ A E + G N+ +Y
Sbjct: 1204 GKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSY 1263
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
N +++ KD KID A FE M K + TY++++ LC++ R+ +A KL +
Sbjct: 1264 NILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQT 1323
Query: 371 SGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
G + S ++DGL +G EA + I+
Sbjct: 1324 CGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIK 1357
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 149/340 (43%), Gaps = 38/340 (11%)
Query: 74 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 133
C F + K ++A ++F +C + PCT TFN +L + K Y M+R + G
Sbjct: 919 QCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQ 978
Query: 134 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 193
P+L T NILI C + + G P+A+T TT++K + +++
Sbjct: 979 PDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQL 1038
Query: 194 LSAMKRKGYTFDG----------------------------------FGYCTVIAAFVKI 219
M +KG D F Y +I A K
Sbjct: 1039 FDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKD 1098
Query: 220 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
G EA D +M+ G+ D+V Y++L++ C+ G+L+ A EME +G D YT+
Sbjct: 1099 GMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTY 1158
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
LI GL +AG K L M GF + + ++D L K+GK+ A + E M
Sbjct: 1159 NSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRH 1218
Query: 340 K----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
K D TY+++++ LC +L A+KL S G+++
Sbjct: 1219 KGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKL 1258
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 137/283 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ IL MR G PD++TYN+L+ G L + L + + +
Sbjct: 1195 ILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADR 1254
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI +V+SYN L++ + K DEA R F++M L P T T+N ++ LC++ A
Sbjct: 1255 GIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTA 1314
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F +Q G +L TY +L+ GLCK G L A + + + + H PN ++ ++
Sbjct: 1315 QKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDG 1374
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R K + + + + G D Y +I G L EA + QM G D
Sbjct: 1375 MCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPD 1434
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
+++N +I KE ++ A LL+EM + F D+ ++L+
Sbjct: 1435 SITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 196/394 (49%), Gaps = 2/394 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI CQ D + G+ P +V YN+LI G ++ L+ +L L+++M + G
Sbjct: 334 LIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEG 393
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+W+YN +++ L ++G +AN + I P TFN +++G CK DNA+
Sbjct: 394 MSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAI 453
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + HG P+++TYN ++ GLCKA + K + + G PN ITY +++
Sbjct: 454 GILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESL 513
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLD 240
+ RK L++L ++ +G D + TVI+ F G L EA +M +
Sbjct: 514 CKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHT 573
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +YN +IN + ++ ++ A L EM +G + D YT+ ++IDG CK GN+ L
Sbjct: 574 VATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLL 633
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPS 360
+IGF +L + +++ L ++ A+ + M V+ ++V K+ +
Sbjct: 634 KEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLM-VRTGVVPEAVVTIFDADKKAVA 692
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
A K+++ L I A + + DG+R+ ++
Sbjct: 693 APKIIVEDLLKKSHITYYAYELLYDGIRNKKLQK 726
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 183/367 (49%), Gaps = 11/367 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ ++ F+ + + RM+ GI+PDV T+ I R +L LL+ M G
Sbjct: 117 IMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQG 176
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ Y +++ ++ EA +F M+ + P ATFN +++ LCK +
Sbjct: 177 CELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGE 236
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLR-------TARWILKELGDSGHAPNAITY 174
++ + K+G P L T+NI I+GLC+ G L A L ++ + G P+ TY
Sbjct: 237 KLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTY 296
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TI+ + K + IL K KG+ D F YC++I + G + A E+ +
Sbjct: 297 NTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALG 356
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ IV YNTLI ++G + A L+++M K+G D +T+ ++I+GLCK G +
Sbjct: 357 KGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSD 416
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVH 350
A L G+ ++ +N ++D K K+D+AI + +SM D TY+S+++
Sbjct: 417 ANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILN 476
Query: 351 NLCKAKR 357
LCKA +
Sbjct: 477 GLCKAAK 483
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 176/362 (48%), Gaps = 11/362 (3%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
Y + N+M GI P + T+N L+ + L LL+++L+ G+ P+++++N +
Sbjct: 200 AYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQ 259
Query: 75 CLFQLG-------KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
L + G K EA M+ L P T+N ++ G K +A R+ +
Sbjct: 260 GLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDA 319
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
+ GFVP+ TY LI G+C+ G + A + +E G P+ + Y T++K +
Sbjct: 320 KFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLV 379
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
L++++ M ++G + D + Y VI K+G + +A + + + G DI ++NTL
Sbjct: 380 LKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTL 439
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
I+ YCK K++ A +LD M G D T+ +++GLCKA + + + + G
Sbjct: 440 IDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGC 499
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASK 363
N+ YN +++ L K K+ A+++ E + + D ++ +++ C L A +
Sbjct: 500 LPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQ 559
Query: 364 LL 365
L
Sbjct: 560 LF 561
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 170/359 (47%), Gaps = 5/359 (1%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
L++M G+ PD TYN++I G ++ + + +L + G PD ++Y SL+ + Q
Sbjct: 281 LHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQ 340
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
G D A +F++ + L P +N ++ GL + AL++ + K G P++ T
Sbjct: 341 DGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWT 400
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
YN++I GLCK G + A +L G+ P+ T+ T++ + K + IL +M
Sbjct: 401 YNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMW 460
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
G T D Y +++ K + ++ + + ++ G +I++YN LI CK K+
Sbjct: 461 SHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVT 520
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCI 317
A LL+E+ +G D + +I G C G++ A +L + + YN +
Sbjct: 521 EALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIM 580
Query: 318 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++ + +D A +F M K DS+TY M+ CK + S LL ++ G
Sbjct: 581 INAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIG 639
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 139/305 (45%), Gaps = 13/305 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ +LN G PD+ T+N+LI G + + ++ +LD M
Sbjct: 403 LVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSH 462
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV +YNS+++ L + KP++ F+ ++ P T+NI++ LCK R A
Sbjct: 463 GVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEA 522
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + ++ G +P+ V++ +I G C G L A + + + + + IM
Sbjct: 523 LDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMIN 582
Query: 181 CFRNR-KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
F + + ++ M KG D + Y +I F K+G + D++ + + G
Sbjct: 583 AFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVP 642
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG---------FECDK---YTHTILIDGLC 287
+ ++ +IN C + ++ A ++ M + G F+ DK I+++ L
Sbjct: 643 SLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVVTIFDADKKAVAAPKIIVEDLL 702
Query: 288 KAGNI 292
K +I
Sbjct: 703 KKSHI 707
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 162/363 (44%), Gaps = 12/363 (3%)
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYT 117
E G +Y ++ L G+ D RV +M + D + + + +
Sbjct: 33 EDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGVYVSAMRNYGRKGKV 92
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
A+ +F + + P + +YN ++ L + G A + + G AP+ T+T
Sbjct: 93 QEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIR 152
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+K R ++ L +L+ M +G + YCTVI+ F + EA + +M+ G+
Sbjct: 153 IKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGI 212
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
I ++N L+++ CK+G L+ LL+++ K G + +T I I GLC+ G ++GA
Sbjct: 213 FPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANS 272
Query: 298 HL----EYMNKI---GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 346
+ Y++K+ G + + YN I+ K GKI A + + + K D FTY
Sbjct: 273 KVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYC 332
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
S++ +C+ + A L L G++ ++ GL G +A ++ + +
Sbjct: 333 SLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKE 392
Query: 407 KIS 409
+S
Sbjct: 393 GMS 395
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 194/369 (52%), Gaps = 6/369 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C ++ RM E G P+VVTYNS++ G ++ S +LDLL +M E
Sbjct: 141 LINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERN 200
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ DV++Y++++ L + G D A +F++M + T+N ++ GLCK ++ +
Sbjct: 201 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGV 260
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC- 180
++ + + +P ++T+N+LI K G+L+ A + KE+ G +PN ITY ++M
Sbjct: 261 QLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGY 320
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C +NR + +L M R + D + ++I + K+ R+ E ++ G+ +
Sbjct: 321 CMQNRLSEAN-NMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVAN 379
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+Y+ L+ +C+ GKLE A L EM G D T+ IL+DGLC G ++ A E
Sbjct: 380 TVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFE 439
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
+ K + ++ Y I++ + K GK++ A N+F S+ K + TY+ M+ LCK
Sbjct: 440 DLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 499
Query: 357 RLPSASKLL 365
L A+ LL
Sbjct: 500 SLSEANILL 508
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 208/408 (50%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ +C+ Y++L ++ + G PD T+N+LI G S +S ++ L+ M+E
Sbjct: 105 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVEN 164
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V +YNS+++ + + G A + + M ++ T++ +++ LC++ D A
Sbjct: 165 GCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAA 224
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +F+ ++ G LVTYN L+ GLCKAG+ +LK++ PN IT+ ++
Sbjct: 225 ISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDV 284
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + E+ M KG + + Y +++ + RL EA + ++ MV + D
Sbjct: 285 FVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPD 344
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV++ +LI YCK +++ L ++ K+G + T++IL+ G C++G ++ A +
Sbjct: 345 IVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQ 404
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M +G ++ Y ++D L +GK++ A+ +FE ++ D Y+ ++ +CK
Sbjct: 405 EMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGG 464
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++ A L S GV+ ++ GL G EA + K+
Sbjct: 465 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 512
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 172/337 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID+ C+ DA ++ M GI +VTYNSL+ G + + + LL +M
Sbjct: 211 IIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRK 270
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V ++N L+ + GK EAN ++++MI ++P T T+N +++G C A
Sbjct: 271 IIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEAN 330
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + ++ P++VT+ LIKG CK R+ + +++ G N +TY+ +++
Sbjct: 331 NMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGF 390
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ K ++ E+ M G D Y ++ G+L++A + E + + LDI
Sbjct: 391 CQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDI 450
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V Y +I CK GK+E A+ L + +G + + T+T++I GLCK G++ A + L
Sbjct: 451 VMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 510
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
M + G + N YN ++ +DG + + + E M+
Sbjct: 511 MEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 547
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 164/320 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ ++ G +L M I P+V+T+N LI + L + +L EM+ G
Sbjct: 246 LVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKG 305
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+ +YNSLM + EAN + M+ + +P TF ++ G CK + D +
Sbjct: 306 ISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGM 365
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++FR + K G V VTY+IL++G C++G+L A + +E+ G P+ +TY ++
Sbjct: 366 KLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGL 425
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N K + LEI +++ D Y +I K G++++A + + GV+ ++
Sbjct: 426 CDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 485
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y +I+ CK+G L A +LL +ME+ G E + T+ LI + G++ + +E
Sbjct: 486 MTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEE 545
Query: 302 MNKIGFDSNLEAYNCIVDRL 321
M GF ++ + ++D L
Sbjct: 546 MKSCGFSADASSIKMVIDML 565
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 186/401 (46%), Gaps = 4/401 (0%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D + M + P +V ++ +G + LD +M GI ++++ N +
Sbjct: 47 DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
++C + K A V ++ P T TFN ++NGLC A+ + + ++G
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGC 166
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P +VTYN ++ G+CK+G A +L+++ + + TY+TI+ R+ +
Sbjct: 167 QPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAIS 226
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ M+ KG Y +++ K G+ + ++ M + + +++++N LI+++
Sbjct: 227 LFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFV 286
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
KEGKL+ A L EM +G + T+ L+DG C + A L+ M + ++
Sbjct: 287 KEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIV 346
Query: 313 AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
+ ++ K ++D + +F + V ++ TYS +V C++ +L A +L
Sbjct: 347 TFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEM 406
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+ GV ++DGL +G +A +I ++ +K++
Sbjct: 407 VSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMN 447
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 151/289 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID + + + M GISP+ +TYNSL+ G + LS + ++LD M+
Sbjct: 280 VLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRN 339
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PD+ ++ SL+ ++ + DE ++F+ + L T T++I++ G C++ + A
Sbjct: 340 NCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIA 399
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ + G +P+++TY IL+ GLC G+L A I ++L S + + YT I++
Sbjct: 400 EELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEG 459
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + + ++ KG + Y +I+ K G L EA + +M DG + +
Sbjct: 460 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPN 519
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
+YNTLI + ++G L A+ L++EM+ GF D + ++ID L A
Sbjct: 520 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLSSA 568
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 138/289 (47%), Gaps = 4/289 (1%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K D+A +FQ+MI P F+ +G+ + + L + ++ +G + T N
Sbjct: 45 KEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLN 104
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
I+I C+ + A +L ++ G+ P+ T+ T++ K + +++ M
Sbjct: 105 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVEN 164
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G + Y +++ K G A D + +M V+ D+ +Y+T+I+ C++G ++AA
Sbjct: 165 GCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAA 224
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
L EME +G + T+ L+ GLCKAG L+ M N+ +N ++D
Sbjct: 225 ISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDV 284
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
K+GK+ A +++ M K ++ TY+S++ C RL A+ +L
Sbjct: 285 FVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNML 333
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 197/391 (50%), Gaps = 6/391 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
I M E+G+SP+V TYN LI G L L EM G P+V +YN+++
Sbjct: 190 IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYC 249
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+L K EA ++ + M L P ++N+++NGLC+ + + K +VP+ V
Sbjct: 250 KLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRV 309
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T+N LI G C G A + E+ +G +PN +TYTT++ + +E L M
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ +G +G Y T+I F + G LK+A M++MV +G I++YN LIN +C G++
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRM 429
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNC 316
E A LL EM ++GF D +++ +I G C+ ++ A +L +E + K G ++ Y+
Sbjct: 430 EDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAK-GISPDVATYSS 488
Query: 317 IVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++ L K ++ ++F+ M D TY+S+++ C L A +L ++ G
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG 548
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+++G +EAK++ K+
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRLLLKL 579
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 184/373 (49%), Gaps = 4/373 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C + + G M G P+VVTYN++I + + + LL M
Sbjct: 208 ILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALK 267
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P++ SYN +++ L + G+ E + + ++M P TFN ++NG C A
Sbjct: 268 GLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQA 327
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + K+G P +VTY LI +CKAG L A L ++ D G PN TYTT++
Sbjct: 328 LVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDG 387
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K +I+ M G+T Y +I +GR+++A+ +++M+ G D
Sbjct: 388 FSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPD 447
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+VSY+T+I+ +C+ +LE A+ L EM +G D T++ LI GLCK + +
Sbjct: 448 VVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQ 507
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M +G + Y +++ +G +D A+ + + M K D TY+ +++ K
Sbjct: 508 EMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQS 567
Query: 357 RLPSASKLLLSCL 369
R A +LLL L
Sbjct: 568 RTKEAKRLLLKLL 580
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 183/360 (50%), Gaps = 5/360 (1%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE-ANRVFQD 91
++ ++ R +L++ +L +++ G P V SYN+++ + + + + A +F++
Sbjct: 134 VFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKE 193
Query: 92 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
M+ ++P T+NI++ G C + L F ++++G +P +VTYN +I CK +
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRK 253
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
+ A +L+ + G PN I+Y ++ R + K EIL M ++ Y D + T
Sbjct: 254 IGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNT 313
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+I + +G +A +MV +G+ ++V+Y TLIN CK G L A LD+M +G
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG 373
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
+ T+T LIDG + G +K A ++ M + GF + YN +++ G+++ A
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDAS 433
Query: 332 NVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ + M + D +YS+++ C+ + L A +L + + G+ + +++ GL
Sbjct: 434 GLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGL 493
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 200/405 (49%), Gaps = 20/405 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC +F + M + G+SP+VVTY +LI + L+ +++ LD+M + G
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG 373
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +Y +L+ Q G +A ++ ++M+ TP T+N ++NG C ++A
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDAS 433
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + + GF+P++V+Y+ +I G C+ L A + E+ G +P+ TY+++++
Sbjct: 434 GLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGL 493
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R+ ++ M G D Y ++I A+ G L +A ++M+ G DI
Sbjct: 494 CKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDI 553
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID---------------GL 286
V+YN LIN + K+ + + A LL ++ + ++ T+ LID G
Sbjct: 554 VTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGF 613
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDS 342
C G + A LE M + G+ N E YN I+ K G I+ A N+++ M S
Sbjct: 614 CMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHS 673
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
T ++ +L + ++LL LKS RI ++A V+ G+
Sbjct: 674 VTIMALAKSLYHEGKEVELNQLLDYTLKS-CRITEAALAKVLIGI 717
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 167/350 (47%), Gaps = 28/350 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C + +L M E G PDVV+Y+++I+G RN L + L EM+ G
Sbjct: 419 LINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKG 478
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV +Y+SL+ L + + E +FQ+M+ L P T+ ++N C D AL
Sbjct: 479 ISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKAL 538
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + + GF P++VTYN+LI G K R + A+ +L +L PN ITY T++ C
Sbjct: 539 RLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNC 598
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N ++K L ++ G+C G + EA +E M+ G +L+
Sbjct: 599 -NNLEFKSALALMK------------GFCMK-------GLMNEADRVLESMLQKGYKLNE 638
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL-- 299
YN +I+ + K G +E AY L EM GF H++ I L K+ +G + L
Sbjct: 639 EVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFA----PHSVTIMALAKSLYHEGKEVELNQ 694
Query: 300 --EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS 347
+Y K + ++ K+G +D NV + M + YSS
Sbjct: 695 LLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLPYSS 744
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 153/349 (43%), Gaps = 48/349 (13%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV----------------------- 137
+A F++++ + + AL + + +GF+P ++
Sbjct: 132 SAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIF 191
Query: 138 -------------TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
TYNILI+G C AG L + E+ +G PN +TY TI+ +
Sbjct: 192 KEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKL 251
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
RK ++L M KG + Y VI + G++KE ++ +E+M D V++
Sbjct: 252 RKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTF 311
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
NTLIN YC G A +L EM K G + T+T LI+ +CKAGN+ A L+ M
Sbjct: 312 NTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRD 371
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMVHNLCKAKRLP 359
G N Y ++D + G + A + + M V++ F TY+++++ C R+
Sbjct: 372 RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEM-VENGFTPTIITYNALINGHCILGRME 430
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE--AKKIQSKIRMA 406
AS LL ++ G + ++ G CR + K Q K+ M
Sbjct: 431 DASGLLQEMIERGFIPDVVSYSTIISGF----CRNQELEKAFQLKVEMV 475
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 178/359 (49%), Gaps = 8/359 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI A C+ L+ M +G PD T+NSLI G R L + DL D+M G
Sbjct: 135 LIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRG 194
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
D SY +L+ + G+ DEA +F+++ D+ T ++ GLC R + L
Sbjct: 195 FSQDAVSYAALIEGFCETGRVDEALELFRELEQPDMY----THAALVKGLCDARRGEEGL 250
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + +++ G+ P Y L+ C+ + A +L E+ D+G P A+T T ++
Sbjct: 251 YMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAY 310
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + + + +MK KG + + Y ++ F +G++ +A ++QM GV+ D+
Sbjct: 311 CREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDV 370
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN LI C +G +E+A+ LL ME G D+YT+ +LID LCK G + A +
Sbjct: 371 VTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDG 430
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ G N +N +++ L K GK D A E M D++TYS + NLCK K
Sbjct: 431 LEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTK 489
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 193/458 (42%), Gaps = 55/458 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++AYC+ + M+ G P+V TYN+++ G + ++ LLD+M E G
Sbjct: 306 VVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECG 365
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +YN L+ G + A R+ + M L T+N++++ LCK D A
Sbjct: 366 VEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEAC 425
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F GL+ G P VT+N +I GLCK G+ A L+++ +G AP+ TY+ ++
Sbjct: 426 SLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENL 485
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + GL + M +K Y VI K AT QMV+ G D+
Sbjct: 486 CKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDV 545
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y T + YC EG+L A ++ EM+K G D + LIDG G A L++
Sbjct: 546 VTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKH 605
Query: 302 MNKIG---------------------------------------------------FDSN 310
M + S+
Sbjct: 606 MTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSS 665
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLL 366
AY I++ ++ ++D ++ M+ D Y+S+V+ CK + P A LL
Sbjct: 666 ARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLC 725
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
S + G + + ++ G G AK+I +R
Sbjct: 726 SMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLR 763
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 169/364 (46%), Gaps = 9/364 (2%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIP-PDVWSYNSLMHCLFQLGKPDEANRVFQD 91
T+ SL+ +R +L L L M G P P +YN+L+ L + A R
Sbjct: 95 TFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSL 154
Query: 92 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
M+ P TFN ++ G C+ + D A +F + GF + V+Y LI+G C+ GR
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGR 214
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
+ A + +EL P+ T+ ++K R+ + GL +L MK G+ Y
Sbjct: 215 VDEALELFREL----EQPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAA 270
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
++ + + + +EA + +M +G+ V+ ++N YC+EG++ A + + M+ +G
Sbjct: 271 LVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKG 330
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
E + +T+ ++ G C G + A L+ M + G + ++ YN ++ DG I+ A
Sbjct: 331 CEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAF 390
Query: 332 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ ME D +TY+ ++ LCK ++ A L G+R V++GL
Sbjct: 391 RLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGL 450
Query: 388 RHSG 391
G
Sbjct: 451 CKGG 454
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 163/348 (46%), Gaps = 4/348 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D +C+ + +LN M + G+ P VT +++ R +S ++ + + M G
Sbjct: 271 LVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKG 330
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+VW+YN+++ +GK +A + M + P T+N+++ G C + + ++A
Sbjct: 331 CEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAF 390
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ R ++ +G + TYN+LI LCK G++ A + L G PN++T+ T++
Sbjct: 391 RLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGL 450
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K+ + L M G D + Y I K +E ++++M+ V+
Sbjct: 451 CKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPST 510
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y +I+ KE A + +M G D T+T + C G + A +
Sbjct: 511 VNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVME 570
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTY 345
M K G + AYN ++D GK DHA+ + + M + + FT+
Sbjct: 571 MKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTF 618
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 151/357 (42%), Gaps = 16/357 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDA C+ D ++ + + GI P+ VT+N++I G + + L++M+
Sbjct: 410 VLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSA 469
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD ++Y+ + L + E +M+ D+ P T + I+++ L K R A
Sbjct: 470 GCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLA 529
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R++ + G P++VTY ++ C GRL A ++ E+ G +A+ Y T++
Sbjct: 530 TRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDG 589
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV----------------IAAFVKIGRLKE 224
K + IL M + F + + + K L +
Sbjct: 590 HTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELAD 649
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
+ E M + V +Y ++ + +E +L+ L+ M++ ++ +T L++
Sbjct: 650 VFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVN 709
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 341
CK A L M GF NL +Y ++ +G+ D A +F + K+
Sbjct: 710 CFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKE 766
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 135/372 (36%), Gaps = 51/372 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ FD T L +M AG +PD TY+ I + L +DEML+
Sbjct: 446 VINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKD 505
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P +Y ++ LF+ A R++ M+ +P T+ + C A
Sbjct: 506 VKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAE 565
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY------- 174
+ ++K G + + + YN LI G G+ A ILK + PN T+
Sbjct: 566 NVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHL 625
Query: 175 -------TTIMKCCFRNRKYKLG--LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
+K + +L E+ MK+ Y ++ F + RL E
Sbjct: 626 LQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEV 685
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF------------- 272
T + M D + L+ Y +L+N +CK A+ LL M GF
Sbjct: 686 TSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSG 745
Query: 273 ----------------------ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
D+ I+IDGL + G+ + + ++ +
Sbjct: 746 FTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPS 805
Query: 311 LEAYNCIVDRLG 322
E Y + + L
Sbjct: 806 DETYAMLTEELS 817
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 36/232 (15%)
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD-GFGYCTVIAAFVKIGRLKEATDYMEQ 231
T+ +++ R L L + + M G G Y +I A + L+ A Y+
Sbjct: 95 TFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSL 154
Query: 232 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
MV G + D ++N+LI YC+ +L+ A L D+M +GF D ++ LI+G C+
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCET-- 212
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHN 351
G++D A+ +F +E D +T++++V
Sbjct: 213 ---------------------------------GRVDEALELFRELEQPDMYTHAALVKG 239
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
LC A+R +L + G R A A+VD EA+K+ +++
Sbjct: 240 LCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEM 291
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/302 (19%), Positives = 122/302 (40%), Gaps = 16/302 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID + ++ I +M G SPDVVTY + + L + +++ EM +
Sbjct: 515 IVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKG 574
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML------------ 108
GI D +YN+L+ +GK D A + + M P TF I+L
Sbjct: 575 GIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDV 634
Query: 109 ----NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 164
+ K + +F ++K+ Y +++G + RL ++ + +
Sbjct: 635 PLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKE 694
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
N YT+++ C + R Y +L +M G+ + Y +++ F G+
Sbjct: 695 DDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADR 754
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A + + D + + +I+ ++G + + ++ +E+ + T+ +L +
Sbjct: 755 AKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTE 814
Query: 285 GL 286
L
Sbjct: 815 EL 816
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 202/398 (50%), Gaps = 5/398 (1%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
S + L+ M G++P+V TYN L+ L ++ ++ +M G P+ +YN
Sbjct: 132 SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYN 191
Query: 71 SLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
+L+ + G+ D A RV M G+ P TFN M+NGLCK + A ++F + +
Sbjct: 192 TLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVR 251
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G P++V+YN L+ G CK G L + + E+ G P+ +T+T+++ + +
Sbjct: 252 EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQ 311
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+ +++ M+ +G + + +I F K G L +A +E+M G+Q +V YN LIN
Sbjct: 312 AVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALIN 371
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
YCK G+++ A L+ EME + + D T++ +I G CK GN+ A + M K G
Sbjct: 372 GYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLP 431
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 365
+ Y+ ++ L ++ +++ A +FE+M D FTY++++ CK + A L
Sbjct: 432 DAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLH 491
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++ GV +++GL S +EA ++ K+
Sbjct: 492 DEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 190/366 (51%), Gaps = 6/366 (1%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G +P V YN+++ + SL S + L ML G+ P+V++YN L+ L G+ +EA
Sbjct: 113 GYAPSVPAYNAVLLALSDASLPS-ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV-PELVTYNILIK 144
V DM P T+N ++ C+ D A R+ +++ G P LVT+N ++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
GLCKAGR+ AR + E+ G AP+ ++Y T++ + L + S M ++G
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D + ++I A K G L++A + QM G++++ V++ LI+ +CK+G L+ A L +
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+EM K G + + LI+G CK G + AR + M ++ Y+ I+ K
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
G +D A + + M K D+ TYSS++ LC+ KRL A +L + L+ GV+ +
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471
Query: 381 KAVVDG 386
++DG
Sbjct: 472 TTLIDG 477
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 202/414 (48%), Gaps = 19/414 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ + + + M G++PDVV+YN+L++G + L SL + EM + G
Sbjct: 229 MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 288
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV ++ SL+H + G ++A + M L TF +++G CK + D+AL
Sbjct: 289 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 348
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++K G P +V YN LI G CK GR+ AR +++E+ P+ +TY+TI+
Sbjct: 349 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 408
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ M +KG D Y ++I + RL +A + E M+ GVQ D
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLE 300
+Y TLI+ +CKEG +E A L DEM ++G D T+++LI+GL K+ K A RL +
Sbjct: 469 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFK 528
Query: 301 YMNKIGFDSNLE-----------AYNCIVDRLGK---DGKIDHAINVFESMEVK----DS 342
++ N++ + +V L G + A V++SM + D
Sbjct: 529 LYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDG 588
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
YS ++H C+ + A L+SG ++ ++V GL G EA
Sbjct: 589 SVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 642
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 196/371 (52%), Gaps = 5/371 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ A C + ++ MR AG +P+ VTYN+L+A R L + ++ M E
Sbjct: 157 ILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREE 216
Query: 61 G-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G P++ ++NS+++ L + G+ + A +VF +M+ L P ++N +L+G CK
Sbjct: 217 GNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHE 276
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+L +F + + G VP++VT+ LI CKAG L A ++ ++ + G N +T+T ++
Sbjct: 277 SLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID 336
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ L + M++ G Y +I + K+GR+ A + + +M V+
Sbjct: 337 GFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKP 396
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+V+Y+T+I+ YCK G L++A+ L +M K+G D T++ LI GLC+ + A
Sbjct: 397 DVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELF 456
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
E M ++G + Y ++D K+G ++ A+++ + M K D TYS +++ L K+
Sbjct: 457 ENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKS 516
Query: 356 KRLPSASKLLL 366
R A +LL
Sbjct: 517 ARTKEAHRLLF 527
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 186/361 (51%), Gaps = 9/361 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L+ A+C+ D +++ MRE G P++VT+NS++ G + + + + DEM+
Sbjct: 193 LVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE 252
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV SYN+L+ ++G E+ VF +M L P TF +++ CK + A
Sbjct: 253 GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQA 312
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + +++ G VT+ LI G CK G L A ++E+ G P+ + Y ++
Sbjct: 313 VALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALING 372
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + L E++ M+ K D Y T+I+ + K+G L A ++M+ GV D
Sbjct: 373 YCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPD 432
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
++Y++LI C+E +L A L + M + G + D++T+T LIDG CK GN++ A LH
Sbjct: 433 AITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHD 492
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHNLCKA 355
E + K G ++ Y+ +++ L K + A ++ V D+ Y +++ LC +
Sbjct: 493 EMIRK-GVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM--LCCS 549
Query: 356 K 356
K
Sbjct: 550 K 550
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 159/345 (46%), Gaps = 41/345 (11%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
+++L+ L +P A P +N +L L + +A R +
Sbjct: 86 FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLAL-SDASLPSARRFLSSML 144
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR----- 183
+HG P + TYNIL++ LC GRL A ++ ++ +G APNA+TY T++ R
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204
Query: 184 -------------NRKYKL--------GL----------EILSAMKRKGYTFDGFGYCTV 212
N K L GL ++ M R+G D Y T+
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 264
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
++ + K+G L E+ +M G+ D+V++ +LI+ CK G LE A L+ +M ++G
Sbjct: 265 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 324
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
++ T T LIDG CK G + A L +E M K G ++ YN +++ K G++D A
Sbjct: 325 RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARE 384
Query: 333 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ ME K D TYS+++ CK L SA +L LK GV
Sbjct: 385 LIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGV 429
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 173/351 (49%), Gaps = 15/351 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI A C+ + + ++ +MRE G+ + VT+ +LI G + L +L ++EM + G
Sbjct: 299 LIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCG 358
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P V YN+L++ +LG+ D A + ++M + P T++ +++G CK D+A
Sbjct: 359 IQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAF 418
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + + K G +P+ +TY+ LI+GLC+ RL A + + + G P+ TYTT++
Sbjct: 419 QLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGH 478
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD-----YMEQMVTDG 236
+ + L + M RKG D Y +I K R KEA Y E V D
Sbjct: 479 CKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDN 538
Query: 237 VQLDIV----------SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
++ D + S L+ +C +G ++ A + M + ++ D ++ILI G
Sbjct: 539 IKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGH 598
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
C+ GN++ A + M + GF N + +V L ++G + A N + +
Sbjct: 599 CRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 649
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 138/288 (47%), Gaps = 19/288 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I YC+ + D+ + + +M + G+ PD +TY+SLI G L+ + +L + ML++G
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ PD ++Y +L+ HC + G ++A + +MI + P T+++++NGL K+ T
Sbjct: 464 VQPDEFTYTTLIDGHC--KEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521
Query: 120 ALRMFRGLQKHGFVPELVTYNIL---------------IKGLCKAGRLRTARWILKELGD 164
A R+ L VP+ + Y+ L +KG C G ++ A + + + D
Sbjct: 522 AHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLD 581
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
+ Y+ ++ R + L M R G++ + +++ + G + E
Sbjct: 582 RNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVE 641
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
A + ++ ++T D + LI+L KEG ++A +L M + G
Sbjct: 642 ADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGL 689
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 116/231 (50%), Gaps = 6/231 (2%)
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
G+AP+ Y ++ + LS+M R G + + Y ++ A GRL+EA
Sbjct: 113 GYAPSVPAYNAVL-LALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG-FECDKYTHTILID 284
+ M G + V+YNTL+ +C+ G+L+ A ++ M ++G + + T +++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VK 340
GLCKAG ++GAR + M + G ++ +YN ++ K G + ++ VF M V
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
D T++S++H CKA L A L+ + G+R+ + A++DG G
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKG 342
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 209/408 (51%), Gaps = 5/408 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL-LSCSLDLLDEMLE 59
+++ +Y + D +I++ + G P V++YN+++ R+ +S + ++ EML+
Sbjct: 139 LVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQ 198
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ P+V++YN L+ G D A R F M P T+N +++G CK R D+
Sbjct: 199 SQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDD 258
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+ R + G P L++YN++I GLC+ GR++ ++L E+ G++ + +TY T++K
Sbjct: 259 GFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIK 318
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + L + + M R G + Y ++I + K G + AT++++QM G+
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCP 378
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ +Y TL++ + ++G + AY +L EM GF T+ LI+G C AG + A L
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVL 438
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
E M + G ++ +Y+ ++ + +D A+ V M K D+ TYSS++ C+
Sbjct: 439 EDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQ 498
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+R A L L+ G+ + A+++ G ++A ++ +++
Sbjct: 499 RRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEM 546
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 121/405 (29%), Positives = 193/405 (47%), Gaps = 19/405 (4%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L M + G S D VTYN+LI G + +L + EML G+ P V +Y SL+H +
Sbjct: 297 VLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMC 356
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G + A M L P T+ +++G + Y + A R+ + + +GF P +V
Sbjct: 357 KAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVV 416
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN LI G C AG++ A +L+++ + G P+ ++Y+T++ R+ L + M
Sbjct: 417 TYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKM 476
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
KG D Y ++I F + R KEA D ++M+ G+ D +Y LIN YC EG L
Sbjct: 477 VAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDL 536
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR---LHLEYMNKIGFD------ 308
+ A L +EM ++G D T+++LI+GL K + A+ L L Y + D
Sbjct: 537 QKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTL 596
Query: 309 ----SNLEAYNCI--VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 358
SN+E + + + G + A VFESM K D Y+ M+H C+ +
Sbjct: 597 IENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDI 656
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A L +KSG + A+V L G E + + +
Sbjct: 657 RKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANV 701
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 196/408 (48%), Gaps = 22/408 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI YC+ +F + M G+SP V+TY SLI + ++ + + LD+M G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRG 375
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +Y +L+ Q G +EA RV ++MI +P T+N ++NG C +A+
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAI 435
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ +++ G P++V+Y+ ++ G C++ + A + +++ G P+ ITY+++++
Sbjct: 436 AVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGF 495
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ K ++ M R G D F Y +I A+ G L++A +MV GV D+
Sbjct: 496 CEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDV 555
Query: 242 VSYNTLINLYCKEGKL-EAAYLLLDEMEKQGFECDKYTHTI--------------LIDGL 286
V+Y+ LIN K+ + EA LLL ++ D HT+ LI G
Sbjct: 556 VTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGF 615
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF--- 343
C G + A E M + + AYN ++ + G I A ++++ M VK F
Sbjct: 616 CMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEM-VKSGFLLH 674
Query: 344 --TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
T ++V L K ++ + ++ + L+S + ++ Q V+ + H
Sbjct: 675 TVTVIALVKTLHKEGKVNELNSVIANVLRS-CELSEAEQAKVLVEINH 721
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 152/344 (44%), Gaps = 42/344 (12%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV----------------------- 137
++ F++++ + D AL + Q HGF+P ++
Sbjct: 134 SSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193
Query: 138 -------------TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
TYNILI+G C AG L A + G PN +TY T++ +
Sbjct: 194 KEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKL 253
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
RK G E+L +M KG + Y VI + GR+KE + + +M G LD V+Y
Sbjct: 254 RKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTY 313
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
NTLI YCKEG A ++ EM + G T+T LI +CKAGN+ A L+ M
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRV 373
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMVHNLCKAKRLP 359
G N Y +VD + G ++ A V + M + + F TY+++++ C A ++
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEM-IDNGFSPSVVTYNALINGHCIAGKMV 432
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A +L + G+ + V+ G S EA +++ K+
Sbjct: 433 DAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKM 476
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 123/286 (43%), Gaps = 15/286 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ +C+ D + +M GI PD +TY+SLI G + DL DEML +G
Sbjct: 456 VLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVG 515
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+PPD ++Y +L++ G +A ++ +M+ + P T+++++NGL K T A
Sbjct: 516 LPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAK 575
Query: 122 RMFRGLQKHGFVPELVTYNILI---------------KGLCKAGRLRTARWILKELGDSG 166
R+ L VP VTY+ LI KG C G + A + + + +
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKN 635
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
H P+ Y ++ R + + M + G+ ++ K G++ E
Sbjct: 636 HKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELN 695
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
+ ++ + L+ + +EG ++ +L EM K GF
Sbjct: 696 SVIANVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGF 741
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 15/220 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-EM 60
LI+AYC + N M E G+ PDVVTY+ LI G + + + LL ++ E
Sbjct: 526 LINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEE 585
Query: 61 GIPPDVWSYNSLMHC--------------LFQLGKPDEANRVFQDMICGDLTPCTATFNI 106
+P DV + + +C G EA++VF+ M+ + P +N+
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNV 645
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
M++G C+ A +++ + K GF+ VT L+K L K G++ ++ + S
Sbjct: 646 MIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSC 705
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
A +++ R + L++L+ M + G+ +G
Sbjct: 706 ELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNG 745
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 198/396 (50%), Gaps = 1/396 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C + + N + GI PD+V YNSL+ G L+ +L +++EM E G
Sbjct: 334 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 393
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ +YN +++ L ++G +A V D I P TFN +++G CK D+AL
Sbjct: 394 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSAL 453
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + ++G P+ +TYN ++ GLCKAG++ +E+ G PN ITY +++
Sbjct: 454 QLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF 513
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ K + +++ M ++G D + T+I F + G L+ A +++ G
Sbjct: 514 CRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATA 573
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++NTLI + + + A + DEM +G D YT+ +LIDG CK N+ A +HL
Sbjct: 574 DTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVE 633
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSA 361
M K GF ++ + +++ L + ++ A+ + M VK + L K+ +A
Sbjct: 634 MIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIM-VKIGVVPEVVDTILNADKKEIAA 692
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
K+L+ L I + + +G+R + R+ +
Sbjct: 693 PKILVEDLMKKGHISYPTYEVLHEGVRDNKLTRKHR 728
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 181/375 (48%), Gaps = 4/375 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ L RM G PD TYN++I G + S++ + +LL + + G
Sbjct: 264 LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG 323
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +Y SL++ L G + A +F + + P +N ++ GLC +AL
Sbjct: 324 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 383
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + + G P++ TYNI+I GLCK G + A ++ + G+ P+ T+ T++
Sbjct: 384 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 443
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K L+++ M G D Y +V+ K G++ E + ++M+ G +
Sbjct: 444 CKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNP 503
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN LI +C+ K+E A ++ +M ++G D + LI G C+ G+++GA L +
Sbjct: 504 ITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQK 563
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
+ + G+ + + +N ++ + A +F+ M K DS+TY ++ CK
Sbjct: 564 LEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTAN 623
Query: 358 LPSASKLLLSCLKSG 372
+ A L+ +K G
Sbjct: 624 VDRAYMHLVEMIKKG 638
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 205/437 (46%), Gaps = 36/437 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS-----------------LIAGATRN 44
++DA D + + RM AG+SPD+ T+ L A R
Sbjct: 94 IMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG 153
Query: 45 SLLSCSL--------------DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 90
++ C++ L D+ML + P++ ++N ++H L + G EA +
Sbjct: 154 AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLG 213
Query: 91 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 150
+I ++ T+NI + GLC+ A+R+ G++ + VP++VTYN LI+GLCK
Sbjct: 214 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKS 272
Query: 151 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
+ A L+ + + G P+ TY TI+ + + E+L KG+ D YC
Sbjct: 273 MPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYC 332
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
++I G ++ A + + G++ DIV YN+L+ C +G + A +++EM ++
Sbjct: 333 SLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 392
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
G D T+ I+I+GLCK GNI A + + G+ ++ +N ++D K K+D A
Sbjct: 393 GCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSA 452
Query: 331 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+ + E M D+ TY+S+++ LCKA ++ ++ + G +++
Sbjct: 453 LQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIEN 512
Query: 387 LRHSGCRREAKKIQSKI 403
S EA K+ K+
Sbjct: 513 FCRSNKMEEASKVIVKM 529
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 188/382 (49%), Gaps = 14/382 (3%)
Query: 5 AYCQFVS--FDAGYT-----ILNRMREAGISPDVVTYNSLI-AGATRNSLLSCSLDLLDE 56
AYC V + G+T + ++M + P++ +N ++ A R +L L LL +
Sbjct: 156 AYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGL-LLGK 214
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
+++ G+ ++++YN + L + G+ EA R+ M + P T+N ++ GLCK
Sbjct: 215 VIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSM 273
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
A+ R + G +P+ TYN +I G CK ++ A +LK+ G P+ +TY +
Sbjct: 274 PQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCS 333
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ + LE+ + + KG D Y +++ G + A M +M +G
Sbjct: 334 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 393
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
DI +YN +IN CK G + A +++++ +G+ D +T LIDG CK + A
Sbjct: 394 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSAL 453
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
+E M + G + YN +++ L K GK++ F+ M +K + TY+ ++ N
Sbjct: 454 QLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF 513
Query: 353 CKAKRLPSASKLLLSCLKSGVR 374
C++ ++ ASK+++ + G+
Sbjct: 514 CRSNKMEEASKVIVKMSQEGLH 535
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 181/441 (41%), Gaps = 72/441 (16%)
Query: 20 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 79
+R+ A I P Y + I R L ++D + M PP +YN++M L
Sbjct: 45 SRLSPATIHP---LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDA 101
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV------ 133
D+A++V+ M+ ++P T I L C ALR+ R L G V
Sbjct: 102 AYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVV 161
Query: 134 -------------------------PELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
P L +N ++ LCK G + A +L ++ G +
Sbjct: 162 CGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMS 221
Query: 169 ----------------------------------PNAITYTTIMKCCFRNRKYKLGLEIL 194
P+ +TY T+++ + + + L
Sbjct: 222 INLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYL 281
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
M +G D F Y T+I + KI ++EAT+ ++ V G D V+Y +LIN C E
Sbjct: 282 RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAE 341
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
G +E A L +E + +G + D + L+ GLC G I A + M + G +++ Y
Sbjct: 342 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTY 401
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
N +++ L K G I A V +K D FT+++++ CK +L SA +L+ +
Sbjct: 402 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 461
Query: 371 SGVRILKSAQKAVVDGLRHSG 391
G+ +V++GL +G
Sbjct: 462 YGIAPDTITYNSVLNGLCKAG 482
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 144/304 (47%), Gaps = 12/304 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ + ++N G PDV T+N+LI G + L +L L++ M E
Sbjct: 403 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 462
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD +YNS+++ L + GK +E N FQ+MI P T+NI++ C++ + A
Sbjct: 463 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 522
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + + G P+ V++N LI G C+ G L A + ++L + G++ A T+ T++
Sbjct: 523 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGA 582
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ +I M KG+ D + Y +I K + A ++ +M+ G
Sbjct: 583 FSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPS 642
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG---------FECDK---YTHTILIDGLCK 288
+ ++ +IN ++ A ++ M K G DK IL++ L K
Sbjct: 643 MSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVDTILNADKKEIAAPKILVEDLMK 702
Query: 289 AGNI 292
G+I
Sbjct: 703 KGHI 706
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 199/407 (48%), Gaps = 4/407 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ YC+ +++ M + + PDV TYN LI G ++ + + L DEM +
Sbjct: 287 ILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENL 346
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PDV +YN+L++ F + + M + P T+N+++ K DNA
Sbjct: 347 KLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNA 406
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R +++ GF P+ VT+N LI G CKAGRL A ++ E+ G N++T TI+
Sbjct: 407 GNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHT 466
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
RK ++LS+ ++GY D Y T+I + K G+ EA ++M +
Sbjct: 467 LCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPS 526
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++YNT+I C GK + + L+E+ + G D+ T+ +I G C+ G ++ A
Sbjct: 527 IITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHN 586
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M K F +L N ++ L +G +D A+ +F + K D+ TY++++ LCK
Sbjct: 587 KMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKED 646
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
R A LL + + A++ L +G +EA++ S+I
Sbjct: 647 RFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRI 693
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 211/409 (51%), Gaps = 7/409 (1%)
Query: 2 LIDAYCQFVSFDAGY---TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
LI+A ++ S + Y I + + + G+ + T+N LI G + LS ++ L+ +M
Sbjct: 180 LINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMK 239
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
+ PD SYN+++ L + GK +EA + DM L P TFNI+++G CK +
Sbjct: 240 DFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLK 299
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A ++ + ++ +P++ TYN+LI GLCK G++ A + E+ + P+ +TY T++
Sbjct: 300 EAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLI 359
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
CF G E++ M+ KG + Y V+ +VK G++ A + + +M G
Sbjct: 360 NGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFS 419
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D V++NTLIN YCK G+L A+ ++DEM ++G + + T ++ LC + A
Sbjct: 420 PDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKL 479
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCK 354
L +K G+ + +Y ++ KDGK A+ +++ M+ K+ TY++M+ LC
Sbjct: 480 LSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCH 539
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ + + L L+SG+ ++ ++ G G +A + +K+
Sbjct: 540 SGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKM 588
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 146/310 (47%), Gaps = 23/310 (7%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ C D Y +L+ + G D V+Y +LI G ++ ++ L DEM E
Sbjct: 463 ILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKE 522
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P + +YN+++ L GK D++ +++ L P T+N ++ G C+ + A
Sbjct: 523 IIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAF 582
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K F P+L T NIL++GLC G L A + G A +A+TY TI+
Sbjct: 583 QFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGL 642
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD- 240
+ +++ ++L+ M+ K D + Y +++A GR+KEA ++M ++V G D
Sbjct: 643 CKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQ 702
Query: 241 ----------------------IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
V+++ IN C +GK + A ++ E ++G K T
Sbjct: 703 TISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKST 762
Query: 279 HTILIDGLCK 288
+ L++GL K
Sbjct: 763 YISLMEGLIK 772
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 176/363 (48%), Gaps = 7/363 (1%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQL-GKPDE--ANRVFQDMICGDLTPCTATFNIMLN 109
+ + M + + P++ + N+L++ L + KP + +F D+I + T TFNI++
Sbjct: 161 IFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIY 220
Query: 110 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 169
G C A+ + ++ P+ V+YN ++ LCK G+L AR +L ++ ++G P
Sbjct: 221 GCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLP 280
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
N T+ ++ + K +++ M + D + Y +I K G++ EA
Sbjct: 281 NRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLK 340
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
++M + D+V+YNTLIN + L+D+ME +G + + T+ +++ K
Sbjct: 341 DEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKE 400
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 345
G + A L M + GF + +N +++ K G++ A + + M K +S T
Sbjct: 401 GKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTL 460
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
++++H LC ++L A KLL S K G + + + ++ G G EA K+ +++
Sbjct: 461 NTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKE 520
Query: 406 AKI 408
+I
Sbjct: 521 KEI 523
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 23/171 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C D + N G + D VTYN++I+G + + DLL EM E
Sbjct: 602 ILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEK 661
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEA----NRVFQDMICGDLT------------------ 98
+ PD ++YN+++ L G+ EA +R+ + D T
Sbjct: 662 KLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQES 721
Query: 99 -PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
P + TF+ +N LC +A+ M + + G TY L++GL K
Sbjct: 722 DPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIK 772
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 9/163 (5%)
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL---LLDEM 267
T I A+V R A +M ++ ++++ NTLIN + + YL + ++
Sbjct: 144 TSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDV 203
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG-FDSNLEAYNCIVDRLGKDGK 326
K G + + T ILI G C + A + M F N+ +YN I+D L K GK
Sbjct: 204 IKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNV-SYNTILDVLCKKGK 262
Query: 327 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
++ A ++ M+ + + T++ +V CK L A++++
Sbjct: 263 LNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVI 305
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 202/398 (50%), Gaps = 5/398 (1%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
S + L+ M G++P+V TYN L+ L ++ ++ +M G P+ +YN
Sbjct: 132 SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYN 191
Query: 71 SLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
+L+ + G+ D A RV M G+ P TFN M+NGLCK + A ++F + +
Sbjct: 192 TLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVR 251
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G P++V+YN L+ G CK G L + + E+ G P+ +T+T+++ + +
Sbjct: 252 EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQ 311
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+ +++ M+ +G + + +I F K G L +A +E+M G+Q +V YN LIN
Sbjct: 312 AVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALIN 371
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
YCK G+++ A L+ EME + + D T++ +I G CK GN+ A + M K G
Sbjct: 372 GYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLP 431
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 365
+ Y+ ++ L ++ +++ A +FE+M D FTY++++ CK + A L
Sbjct: 432 DAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLH 491
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++ GV +++GL S +EA ++ K+
Sbjct: 492 DEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 190/366 (51%), Gaps = 6/366 (1%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G +P V YN+++ + SL S + L ML G+ P+V++YN L+ L G+ +EA
Sbjct: 113 GYAPSVPAYNAVLLALSDASLPS-ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV-PELVTYNILIK 144
V DM P T+N ++ C+ D A R+ +++ G P LVT+N ++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
GLCKAGR+ AR + E+ G AP+ ++Y T++ + L + S M ++G
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D + ++I A K G L++A + QM G++++ V++ LI+ +CK+G L+ A L +
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+EM K G + + LI+G CK G + AR + M ++ Y+ I+ K
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
G +D A + + M K D+ TYSS++ LC+ KRL A +L + L+ GV+ +
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471
Query: 381 KAVVDG 386
++DG
Sbjct: 472 TTLIDG 477
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 203/414 (49%), Gaps = 19/414 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ + + + M G++PDVV+YN+L++G + L SL + EM + G
Sbjct: 229 MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 288
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV ++ SL+H + G ++A + M L TF +++G CK + D+AL
Sbjct: 289 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 348
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++K G P +V YN LI G CK GR+ AR +++E+ P+ +TY+TI+
Sbjct: 349 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 408
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ M +KG D Y ++I + RL +A + E M+ GVQ D
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-----R 296
+Y TLI+ +CKEG +E A L DEM ++G D T+++LI+GL K+ K A +
Sbjct: 469 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFK 528
Query: 297 LHLE--YMNKIGFD--------SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
L+ E + I +D + ++ ++ G + A V++SM + D
Sbjct: 529 LYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDG 588
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
YS ++H C+ + A L+SG ++ ++V GL G EA
Sbjct: 589 SVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 642
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 196/371 (52%), Gaps = 5/371 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ A C + ++ MR AG +P+ VTYN+L+A R L + ++ M E
Sbjct: 157 ILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREE 216
Query: 61 G-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G P++ ++NS+++ L + G+ + A +VF +M+ L P ++N +L+G CK
Sbjct: 217 GNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHE 276
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+L +F + + G VP++VT+ LI CKAG L A ++ ++ + G N +T+T ++
Sbjct: 277 SLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID 336
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ L + M++ G Y +I + K+GR+ A + + +M V+
Sbjct: 337 GFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKP 396
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+V+Y+T+I+ YCK G L++A+ L +M K+G D T++ LI GLC+ + A
Sbjct: 397 DVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELF 456
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
E M ++G + Y ++D K+G ++ A+++ + M K D TYS +++ L K+
Sbjct: 457 ENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKS 516
Query: 356 KRLPSASKLLL 366
R A +LL
Sbjct: 517 ARTKEAHRLLF 527
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 195/386 (50%), Gaps = 10/386 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L+ A+C+ D +++ MRE G P++VT+NS++ G + + + + DEM+
Sbjct: 193 LVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE 252
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV SYN+L+ ++G E+ VF +M L P TF +++ CK + A
Sbjct: 253 GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQA 312
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + +++ G VT+ LI G CK G L A ++E+ G P+ + Y ++
Sbjct: 313 VALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALING 372
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + L E++ M+ K D Y T+I+ + K+G L A ++M+ GV D
Sbjct: 373 YCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPD 432
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
++Y++LI C+E +L A L + M + G + D++T+T LIDG CK GN++ A LH
Sbjct: 433 AITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHD 492
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHNLCKA 355
E + K G ++ Y+ +++ L K + A ++ V D+ Y +++ KA
Sbjct: 493 EMIRK-GVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKA 551
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQK 381
+ + L C+K ++K A K
Sbjct: 552 EFKSVVALLKGFCMKG---LMKEADK 574
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 159/345 (46%), Gaps = 41/345 (11%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
+++L+ L +P A P +N +L L + +A R +
Sbjct: 86 FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLAL-SDASLPSARRFLSSML 144
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR----- 183
+HG P + TYNIL++ LC GRL A ++ ++ +G APNA+TY T++ R
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204
Query: 184 -------------NRKYKL--------GL----------EILSAMKRKGYTFDGFGYCTV 212
N K L GL ++ M R+G D Y T+
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 264
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
++ + K+G L E+ +M G+ D+V++ +LI+ CK G LE A L+ +M ++G
Sbjct: 265 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 324
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
++ T T LIDG CK G + A L +E M K G ++ YN +++ K G++D A
Sbjct: 325 RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARE 384
Query: 333 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ ME K D TYS+++ CK L SA +L LK GV
Sbjct: 385 LIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGV 429
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 173/351 (49%), Gaps = 15/351 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI A C+ + + ++ +MRE G+ + VT+ +LI G + L +L ++EM + G
Sbjct: 299 LIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCG 358
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P V YN+L++ +LG+ D A + ++M + P T++ +++G CK D+A
Sbjct: 359 IQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAF 418
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + + K G +P+ +TY+ LI+GLC+ RL A + + + G P+ TYTT++
Sbjct: 419 QLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGH 478
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD-----YMEQMVTDG 236
+ + L + M RKG D Y +I K R KEA Y E V D
Sbjct: 479 CKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDN 538
Query: 237 VQLDIV----------SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
++ D + S L+ +C +G ++ A + M + ++ D ++ILI G
Sbjct: 539 IKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGH 598
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
C+ GN++ A + M + GF N + +V L ++G + A N + +
Sbjct: 599 CRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 649
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 116/231 (50%), Gaps = 6/231 (2%)
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
G+AP+ Y ++ + LS+M R G + + Y ++ A GRL+EA
Sbjct: 113 GYAPSVPAYNAVL-LALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG-FECDKYTHTILID 284
+ M G + V+YNTL+ +C+ G+L+ A ++ M ++G + + T +++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VK 340
GLCKAG ++GAR + M + G ++ +YN ++ K G + ++ VF M V
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
D T++S++H CKA L A L+ + G+R+ + A++DG G
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKG 342
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 130/271 (47%), Gaps = 19/271 (7%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I YC+ + D+ + + +M + G+ PD +TY+SLI G L+ + +L + ML++G
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ PD ++Y +L+ HC + G ++A + +MI + P T+++++NGL K+ T
Sbjct: 464 VQPDEFTYTTLIDGHC--KEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521
Query: 120 ALRMFRGLQKHGFVPELVTYNIL---------------IKGLCKAGRLRTARWILKELGD 164
A R+ L VP+ + Y+ L +KG C G ++ A + + + D
Sbjct: 522 AHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLD 581
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
+ Y+ ++ R + L M R G++ + +++ + G + E
Sbjct: 582 RNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVE 641
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
A + ++ ++T D + LI+L KEG
Sbjct: 642 ADNAIQDLLTCCPLADAEASKALIDLNRKEG 672
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 123/442 (27%), Positives = 210/442 (47%), Gaps = 39/442 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ + RM+ G SPDVVTYNSLI G + L L+ EM +
Sbjct: 204 IVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKS 263
Query: 61 GIPPDVWSYNSLMHCLFQLGKPD-----------------------------------EA 85
G DV +YN+L++C + G + EA
Sbjct: 264 GCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREA 323
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
++F M + P T+ +++G CK D+A+ + + G VP +VTY +++ G
Sbjct: 324 MKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDG 383
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCK G++ A +L + +G N + YTT++ F N+ + L++L+ MK KG D
Sbjct: 384 LCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELD 443
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y T+I K+ +L EA + +M G++ + V Y T+++ + K GK A LL
Sbjct: 444 VSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLH 503
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
++ G + + T+ LIDGLCKAG+I A H + M ++G D N++ Y ++D K G
Sbjct: 504 KIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIG 563
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+ A+++ M K D Y+S++ K L A L +++G+++
Sbjct: 564 SLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYT 623
Query: 382 AVVDGLRHSGCRREAKKIQSKI 403
+ G + +EA+ + S++
Sbjct: 624 CFISGFCNMNMMQEARGVLSEM 645
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 170/372 (45%), Gaps = 35/372 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+DA+C+ + +MR G+ P+ TY SL+ G + L ++ LLDEM+ G
Sbjct: 310 FVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQG 369
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V +Y ++ L + GK A+ V M + + +++G N+ ++ AL
Sbjct: 370 LVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERAL 429
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++ G ++ Y LI GLCK +L A+ +L ++ D G PN + YTTIM
Sbjct: 430 DLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAF 489
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYC------------------------------- 210
F+ K + +L + G + YC
Sbjct: 490 FKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNV 549
Query: 211 ----TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
T+I F KIG L +A M +MV G+ LD V Y +LI+ + K+G L+ A+ L +
Sbjct: 550 QVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAK 609
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M + G + D Y +T I G C ++ AR L M G + AYNC++ + K G
Sbjct: 610 MIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGN 669
Query: 327 IDHAINVFESME 338
++ A ++ ME
Sbjct: 670 MEEASSLQNEME 681
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 186/414 (44%), Gaps = 49/414 (11%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN---RVF 89
+++L++ + LL ++ L + ++ +PP+ + N H L +L + + R+F
Sbjct: 135 VFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCN---HILLRLARNRQGGLVRRLF 191
Query: 90 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
+ + P TFNI+++ LCK A +F ++ G P++VTYN LI G K
Sbjct: 192 EHLP----APNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKC 247
Query: 150 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 209
G L ++ E+ SG A + +TY ++ C + + MKR G +
Sbjct: 248 GELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTL 307
Query: 210 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
T + AF K G ++EA QM G+ + +Y +L++ CK G+L+ A +LLDEM
Sbjct: 308 STFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVH 367
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 329
QG + T+T+++DGLCK G + A L M + G +N Y ++ + +
Sbjct: 368 QGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSER 427
Query: 330 AINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR----------- 374
A+++ M+ K D Y +++ LCK ++L A LL G+R
Sbjct: 428 ALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMD 487
Query: 375 -ILKSAQK-----------------------AVVDGLRHSGCRREAKKIQSKIR 404
K+ ++ A++DGL +G EA K+R
Sbjct: 488 AFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMR 541
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 187/403 (46%), Gaps = 34/403 (8%)
Query: 12 FDAGYTILNRMREAGISP-------DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP 64
F +L+R+ AG P D++ +L G R++L P
Sbjct: 91 FAHSRRLLSRLLGAGHRPHLAASLVDILHRAALALGPHRSAL-----------------P 133
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 124
V +++L+ L G D+A R + + P T T N +L L +NR R+F
Sbjct: 134 SV--FDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLF 191
Query: 125 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
+H P + T+NI+I LCK G L AR + + G +P+ +TY +++ +
Sbjct: 192 ----EHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKC 247
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
+ + ++S M++ G D Y +I F K G +++A Y +M GV ++V+
Sbjct: 248 GELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTL 307
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
+T ++ +CKEG + A L +M +G +++T+T L+DG CKAG + A + L+ M
Sbjct: 308 STFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVH 367
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VK-DSFTYSSMVHNLCKAKRLPS 360
G N+ Y +VD L K+GK+ A +V ME VK + Y++++H K
Sbjct: 368 QGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSER 427
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A LL G+ + S ++ GL EAK + K+
Sbjct: 428 ALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKM 470
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 122/257 (47%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+LN M+ G+ DV Y +LI G + L + LL +M + G+ P+ Y ++M F
Sbjct: 431 LLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFF 490
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ GK EA + + L P T+ +++GLCK A+ F +++ G P +
Sbjct: 491 KAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQ 550
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
Y LI G CK G L A ++ E+ D G + + + YT+++ + + + + M
Sbjct: 551 VYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKM 610
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
G D + Y I+ F + ++EA + +M+ G+ D +YN LI Y K G +
Sbjct: 611 IETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNM 670
Query: 258 EAAYLLLDEMEKQGFEC 274
E A L +EME C
Sbjct: 671 EEASSLQNEMESVLSSC 687
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 200/402 (49%), Gaps = 4/402 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ D G+++L ++ + G+ P+V+T+++LI G + +++L D M+
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V SY+ ++ L ++GK E ++ + M P +N +++ LCK+R + A
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEA 250
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +F ++ G +P +VTY LI GL GR + A +L E+ P+ + ++ ++
Sbjct: 251 VHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDI 310
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + IL M G D Y T++ + + EA E M++ G D
Sbjct: 311 MCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPD 370
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ S++ L+N YCK +++ A L DEM +G D ++ LI GLC+A A +
Sbjct: 371 VFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFK 430
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M+ G+ NL Y+ ++D L K G +D A+ +F +ME D TY+ M+ +CK
Sbjct: 431 DMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYG 490
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
+ A +L G++ +DG+ G EA K
Sbjct: 491 KFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHK 532
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 171/361 (47%), Gaps = 4/361 (1%)
Query: 9 FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 68
F + + + N M P +V + L + R + L +M GI DV S
Sbjct: 69 FRNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLS 128
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
L++C +L D V +I L P TF+ ++NG C A+ +F +
Sbjct: 129 LTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMV 188
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
G+ P + +Y+I+IKGLC+ G+ +L+ + G P+ + Y TI+ ++R
Sbjct: 189 ARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVN 248
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
+ I MK G Y ++I +GR KEA + +M + D+V+++ LI
Sbjct: 249 EAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLI 308
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
++ CKEG++ A ++L M + G E D T+ L++G C + AR E M G
Sbjct: 309 DIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRM 368
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 364
++ +++ +V+ K +ID A +F+ M + D+ +Y++++ LC+A+R A +L
Sbjct: 369 PDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEEL 428
Query: 365 L 365
Sbjct: 429 F 429
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ YC+ D + + M G+ PD V+YN+LI+G + + +L +M
Sbjct: 376 ILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSN 435
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PP++ +Y+ L+ CL + G D+A +F+ M L P T+NIM++G+CK +A
Sbjct: 436 GYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDA 495
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 169
+F L G P I G+CK G L A +++ +P
Sbjct: 496 RELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 4/201 (1%)
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+ +A V++ K +QM G+ D++S LIN +C+ ++ + +L ++ K G
Sbjct: 97 LFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLG 156
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
E + T + LI+G C G I A + M G+ N+ +Y+ I+ L + GK I
Sbjct: 157 LEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVI 216
Query: 332 NVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ E M+V D Y+++V LCK + + A + +G+ +++ GL
Sbjct: 217 KLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGL 276
Query: 388 RHSGCRREAKKIQSKIRMAKI 408
R+ G +EA + ++++ I
Sbjct: 277 RNLGRWKEAFGLLNEMKGGNI 297
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 48/105 (45%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D + D + M +G+ PD+VTYN +I G + + +L E+
Sbjct: 446 ILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVK 505
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 105
G+ P+ W + + + G DEA++ F+ M D +P N
Sbjct: 506 GLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQGCIN 550
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 185/369 (50%), Gaps = 4/369 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M+ID+ C+ + + M AGI PDVV Y+SL+ G R L +L+ EM
Sbjct: 151 MIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGR 210
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI DV++YNSL+H L + G E M+ +P TF I+++GLCK A
Sbjct: 211 GISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEA 270
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G P+++TYN L+ GLC G+L A + + L D G N +Y ++
Sbjct: 271 QQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILING 330
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+++K + M+ KG Y T+I A + GR++ A +M T G L
Sbjct: 331 YCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLK 390
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +Y L++ CK G LE A L ++K + + +IL+DG+C+AG ++ A +
Sbjct: 391 LSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFD 450
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
++K G + + AYN +++ L G + A+ + ME K DS T++ ++ NL K
Sbjct: 451 EISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKEN 510
Query: 357 RLPSASKLL 365
+ A +LL
Sbjct: 511 EIHEAIQLL 519
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 198/386 (51%), Gaps = 5/386 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + M E G+ D TY LI G + ++ L ++M + DV++Y ++ L
Sbjct: 99 LFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYGMIIDSLC 157
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G EA +F +MI + P ++ +++GLC+ AL F+ ++ G ++
Sbjct: 158 KDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVY 217
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN LI GL +AG + W L + D G +P+A T+T ++ + K +IL M
Sbjct: 218 TYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELM 277
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
KG D Y T++ +G+L++AT E + G++L++ SYN LIN YCK+ K+
Sbjct: 278 HHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKI 337
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A+ L +EM +G + T+ LI LC++G ++ A+ M G L Y +
Sbjct: 338 DEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVL 397
Query: 318 VDRLGKDGKIDHAINVFESM---EVKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+D L K+G ++ AI++F+S+ E K + +S ++ +C+A +L A K K+G+
Sbjct: 398 LDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGL 457
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKI 399
A +++GL + G EA K+
Sbjct: 458 EPDTIAYNILINGLCNKGMLSEAVKL 483
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 181/377 (48%), Gaps = 6/377 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+F M GIS DV TYNSLI G +R L L+ M++ G
Sbjct: 187 LMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRG 246
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +++ L+ L + GK EA ++ + M P T+N ++NGLC ++A
Sbjct: 247 FSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDAT 306
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F L G + +YNILI G CK ++ A + +E+ G P+ +TY T++
Sbjct: 307 KLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGAL 366
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + + ++ M+ G YC ++ K G L+EA D + + + +I
Sbjct: 367 CQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNI 426
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++ L++ C+ GKLE A+ DE+ K G E D + ILI+GLC G + A L
Sbjct: 427 EVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQ 486
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHN--LCKAKRLP 359
M + G + +N I+ L K+ +I AI + E M ++ F+ V + LC A P
Sbjct: 487 MEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRN-FSPDEAVTSMLLCLASFDP 545
Query: 360 SASKLLLS---CLKSGV 373
L+S L+ GV
Sbjct: 546 QWHAALVSLPNALQKGV 562
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 179/352 (50%), Gaps = 7/352 (1%)
Query: 58 LEMGIPPDVWSYNSLMHCLF-QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
L+ G PD + +L+ ++ + G PD A ++F +M L T+ I++NGLCK R
Sbjct: 69 LKRGFEPDAVTVTTLVKGVWMENGIPD-AVQLFDEMTEKGLFGDAKTYGILINGLCKARK 127
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
T A+++ + K ++ TY ++I LCK G A + E+ +G P+ + Y++
Sbjct: 128 TGLAIKLHEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSS 186
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
+M R + K LE M+ +G + D + Y ++I + G KE T ++ MV G
Sbjct: 187 LMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRG 246
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
D ++ LI+ CKEGK+ A +L+ M +G E D T+ L++GLC G ++ A
Sbjct: 247 FSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDAT 306
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
E + G N+ +YN +++ KD KID A +FE M K + TY++++ L
Sbjct: 307 KLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGAL 366
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
C++ R+ +A KL + G + S ++DGL +G EA + I+
Sbjct: 367 CQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIK 418
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 137/283 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ IL M G PD++TYN+L+ G L + L + + +
Sbjct: 256 ILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADR 315
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI +V+SYN L++ + K DEA R+F++M L P T T+N ++ LC++ A
Sbjct: 316 GIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTA 375
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F +Q G +L TY +L+ GLCK G L A + + + + H PN ++ ++
Sbjct: 376 QKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDG 435
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R K + + + + G D Y +I G L EA + QM G D
Sbjct: 436 MCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPD 495
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
+++N +I KE ++ A LL+EM + F D+ ++L+
Sbjct: 496 SITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 197/391 (50%), Gaps = 4/391 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++ C+ + M G P+VV+YN++I G + + + +LD M
Sbjct: 232 IMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK 291
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD ++Y SL+ + + G+ +EA+ +F M+ L P T+N +++G C + A
Sbjct: 292 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA 351
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ K G +P + TYN+L+ L GR+ A ++KE+ G P+AITY ++
Sbjct: 352 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILING 411
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R K ++ + M KG Y ++I + R+KEA D E+++ GV D
Sbjct: 412 YSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPD 471
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++ +N +++ +C G +E A++LL EM+++ D+ T L+ G C+ G ++ AR+ L+
Sbjct: 472 VIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLD 531
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
M + G + +YN ++ G+ G I A V + M TY++++ LCK +
Sbjct: 532 EMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQ 591
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
A +LL + G+ S ++++G+
Sbjct: 592 EGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 154/322 (47%), Gaps = 4/322 (1%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
++ L+ +L + DEA + F M + P T N ML+ K + A ++ +
Sbjct: 160 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 219
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
+ + T+NI++ LCK G+L+ AR + + G PN ++Y TI+ +
Sbjct: 220 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 279
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
IL AM+ KG D + Y ++I+ K GRL+EA+ ++MV G+ + V+YNTLI
Sbjct: 280 GARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLI 339
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
+ YC +G LE A+ DEM K+G T+ +L+ L G + A ++ M K G
Sbjct: 340 DGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGII 399
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
+ YN +++ + G A ++ M K TY+S+++ L + R+ A L
Sbjct: 400 PDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDL 459
Query: 365 LLSCLKSGVRILKSAQKAVVDG 386
L GV A+VDG
Sbjct: 460 FEKILDQGVSPDVIMFNAMVDG 481
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 114/226 (50%), Gaps = 4/226 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ Y + + + + N M GI P VTY SLI +R + + + DL +++L+
Sbjct: 407 ILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 466
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G+ PDV +N+++ HC G + A + ++M + P TFN ++ G C+ +
Sbjct: 467 GVSPDVIMFNAMVDGHC--ANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVE 524
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A + +++ G P+ ++YN LI G + G ++ A + E+ G P +TY ++
Sbjct: 525 EARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALI 584
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
KC +N++ L E+L M KG + D Y ++I + L E
Sbjct: 585 KCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 630
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 142/307 (46%), Gaps = 4/307 (1%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
+ F++++ C+ R D A + F +++ G VP++ T N ++ K R+ A +
Sbjct: 157 SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYA 216
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
E+ + T+ ++ + K K E + M+ G+ + Y T+I + G
Sbjct: 217 EMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRG 276
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
++ A ++ M G++ D +Y +LI+ CKEG+LE A L D+M + G + T+
Sbjct: 277 NIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 336
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 338
LIDG C G+++ A + + M K G ++ YN +V L +G++ A ++ + M
Sbjct: 337 TLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 396
Query: 339 --VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ D+ TY+ +++ + A L L G+ +++ L +EA
Sbjct: 397 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 456
Query: 397 KKIQSKI 403
+ KI
Sbjct: 457 DDLFEKI 463
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 197/391 (50%), Gaps = 4/391 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++ C+ + M G P+VV+YN++I G + + + +LD M
Sbjct: 254 IMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK 313
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD ++Y SL+ + + G+ +EA+ +F M+ L P T+N +++G C + A
Sbjct: 314 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA 373
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ K G +P + TYN+L+ L GR+ A ++KE+ G P+AITY ++
Sbjct: 374 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILING 433
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R K ++ + M KG Y ++I + R+KEA D E+++ GV D
Sbjct: 434 YSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPD 493
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++ +N +++ +C G +E A++LL EM+++ D+ T L+ G C+ G ++ AR+ L+
Sbjct: 494 VIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLD 553
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
M + G + +YN ++ G+ G I A V + M TY++++ LCK +
Sbjct: 554 EMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQ 613
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
A +LL + G+ S ++++G+
Sbjct: 614 EGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 154/322 (47%), Gaps = 4/322 (1%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
++ L+ +L + DEA + F M + P T N ML+ K + A ++ +
Sbjct: 182 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 241
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
+ + T+NI++ LCK G+L+ AR + + G PN ++Y TI+ +
Sbjct: 242 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 301
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
IL AM+ KG D + Y ++I+ K GRL+EA+ ++MV G+ + V+YNTLI
Sbjct: 302 GARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLI 361
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
+ YC +G LE A+ DEM K+G T+ +L+ L G + A ++ M K G
Sbjct: 362 DGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGII 421
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
+ YN +++ + G A ++ M K TY+S+++ L + R+ A L
Sbjct: 422 PDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDL 481
Query: 365 LLSCLKSGVRILKSAQKAVVDG 386
L GV A+VDG
Sbjct: 482 FEKILDQGVSPDVIMFNAMVDG 503
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 114/226 (50%), Gaps = 4/226 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ Y + + + + N M GI P VTY SLI +R + + + DL +++L+
Sbjct: 429 ILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 488
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G+ PDV +N+++ HC G + A + ++M + P TFN ++ G C+ +
Sbjct: 489 GVSPDVIMFNAMVDGHC--ANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVE 546
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A + +++ G P+ ++YN LI G + G ++ A + E+ G P +TY ++
Sbjct: 547 EARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALI 606
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
KC +N++ L E+L M KG + D Y ++I + L E
Sbjct: 607 KCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 652
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 142/307 (46%), Gaps = 4/307 (1%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
+ F++++ C+ R D A + F +++ G VP++ T N ++ K R+ A +
Sbjct: 179 SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYA 238
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
E+ + T+ ++ + K K E + M+ G+ + Y T+I + G
Sbjct: 239 EMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRG 298
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
++ A ++ M G++ D +Y +LI+ CKEG+LE A L D+M + G + T+
Sbjct: 299 NIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 358
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 338
LIDG C G+++ A + + M K G ++ YN +V L +G++ A ++ + M
Sbjct: 359 TLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 418
Query: 339 --VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ D+ TY+ +++ + A L L G+ +++ L +EA
Sbjct: 419 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 478
Query: 397 KKIQSKI 403
+ KI
Sbjct: 479 DDLFEKI 485
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 215/398 (54%), Gaps = 9/398 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + F + M ISP+++T+N++I G + L+ + D++D+M G
Sbjct: 201 LLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWG 260
Query: 62 IPPDVWSYNSLM--HC-LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
P+V +YN+L+ +C + ++GK +A+ + ++M+ ++P + TFN++++G CK+
Sbjct: 261 FWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLS 320
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
AL++F +Q G P +VTYN L+ GLC G+L A+ +L E+ S PN ITY ++
Sbjct: 321 AALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALI 380
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ + + E+ + ++G T + + T++ + K G+++EA + M+ G
Sbjct: 381 NGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFL 440
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC-KAGNIKGARL 297
+ +YN LI +C+EGK+E LL+EM+ +G + D T+ ILI C K K ARL
Sbjct: 441 PNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARL 500
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLC 353
E ++K G + YN +++ +G + A+N+ + ME + + TY+ ++ C
Sbjct: 501 IDEMLDK-GLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYC 559
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ +L A+ LL L+ G+ ++ + + + + G
Sbjct: 560 RKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKG 597
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 181/354 (51%), Gaps = 11/354 (3%)
Query: 66 VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 125
V S N L+ L + + V+++MI ++P TFN ++NGLCK + A +
Sbjct: 195 VLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVD 254
Query: 126 GLQKHGFVPELVTYNILIKGLCKAGR---LRTARWILKELGDSGHAPNAITYTTIMKCCF 182
++ GF P +VTYN LI G CK GR + A ILKE+ ++ +PN++T+ ++
Sbjct: 255 DMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFC 314
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
++ L++ M+ +G Y +++ G+L EA +++M++ ++ +++
Sbjct: 315 KDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVI 374
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
+YN LIN YCK+ LE A L D + KQG + T L+ G CK G ++ A L + M
Sbjct: 375 TYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVM 434
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 358
+ GF N YNC++ ++GK++ N+ M+ + D+ TY+ ++ C+ K
Sbjct: 435 LEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEP 494
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA----KKIQSKIRMAKI 408
A++L+ L G++ +++G G R A K+++ + R A +
Sbjct: 495 KKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANV 548
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 157/299 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID +C+ + A + M+ G+ P VVTYNSL+ G L+ + LLDEML
Sbjct: 308 VLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSS 367
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P+V +YN+L++ + +EA +F ++ LTP TFN +L+G CK + A
Sbjct: 368 NLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEA 427
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + + GF+P TYN LI G C+ G++ + +L E+ G + +TY ++
Sbjct: 428 FLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISA 487
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K ++ M KG Y ++ + G L+ A + +QM +G +
Sbjct: 488 WCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWAN 547
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+V+YN LI YC++GKLE A LL+EM ++G ++ T+ I+ + + + G + HL
Sbjct: 548 VVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIEGHL 606
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 113/244 (46%), Gaps = 13/244 (5%)
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKG---YTFDGFGYCTVIAAFVKIGRLKEAT 226
N+I ++ N K LGLE A KR G Y +++A VK
Sbjct: 159 NSIIADMLVLAYVENSKTVLGLE---AFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVE 215
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
++M+ + +++++NT+IN CK GKL A ++D+M+ GF + T+ LIDG
Sbjct: 216 FVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGY 275
Query: 287 CKAGNIK---GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
CK G + A L+ M + N +N ++D KD + A+ VFE M+ +
Sbjct: 276 CKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLK 335
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
TY+S+V+ LC +L A LL L S ++ A+++G EA+++
Sbjct: 336 PTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEAREL 395
Query: 400 QSKI 403
I
Sbjct: 396 FDNI 399
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 184/355 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ D ++L +M + I +VV YN++I G + + + DL ++M G
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 286
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV++YNSL+ CL G+ +A+R+ DMI + P TFN +++ K A
Sbjct: 287 IKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAE 346
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + + P +VTYN LI G C RL A+ I + P+ +TY T++K
Sbjct: 347 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGF 406
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ + G+E+ M ++G + Y T+I + G A ++MV+DGV DI
Sbjct: 407 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 466
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y+ L++ CK GKLE A ++ + ++K E + YT+ I+I+G+CKAG ++
Sbjct: 467 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCS 526
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAK 356
++ G N+ Y ++ + G + A +F M+ + S + L +A+
Sbjct: 527 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRAR 581
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 200/399 (50%), Gaps = 4/399 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ YC ++++M E G PD VT+N+LI G ++ S ++ L+D M+ G
Sbjct: 157 LLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARG 216
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+++Y ++++ L + G D A + + M G + +N +++GLCK ++ D+A
Sbjct: 217 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAF 276
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ G P++ TYN LI LC GR A +L ++ + PN +T+ +++
Sbjct: 277 DLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAF 336
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K ++ M ++ + Y ++I F RL EA MV+ D+
Sbjct: 337 AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 396
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTLI +CK ++E L EM ++G + T+ LI GL +AG+ A+ +
Sbjct: 397 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 456
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G ++ Y+ ++D L K GK++ A+ VFE ++ + +TY+ M+ +CKA +
Sbjct: 457 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGK 516
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ L S GV+ ++ G G + EA
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 555
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 182/370 (49%), Gaps = 5/370 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C++ D + + N+M GI PDV TYNSLI+ S + LL +M+E
Sbjct: 262 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V ++NSL+ + GK EA ++F +MI + P T+N ++NG C + D A
Sbjct: 322 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 381
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + +P++VTYN LIKG CKA R+ + +E+ G N +TY T+++
Sbjct: 382 QIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 441
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ + +I M G D Y ++ K G+L++A E + ++ +I
Sbjct: 442 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNI 501
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN +I CK GK+E + L + +G + + +T +I G C+ G + A
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 561
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M + G + YN ++ +DG + + + M V D+ T SMV N+ R
Sbjct: 562 MKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI-SMVINMLHDGR 620
Query: 358 LPSASKLLLS 367
L + +LS
Sbjct: 621 LEKSYLEMLS 630
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 186/390 (47%), Gaps = 4/390 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + FD ++ +M+ GI + TY+ L+ R S L +L +L +M+++G
Sbjct: 87 LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLG 146
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ + +SL++ + EA + M+ P T TFN +++GL + A+
Sbjct: 147 YEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAV 206
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P+L TY ++ GLCK G + A +LK++ N + Y TI+
Sbjct: 207 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGL 266
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + ++ + M+ KG D F Y ++I+ GR +A+ + M+ + ++
Sbjct: 267 CKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNV 326
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++N+LI+ + KEGKL A L DEM ++ + + T+ LI+G C + A+
Sbjct: 327 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 386
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M ++ YN ++ K +++ + +F M V ++ TY++++ L +A
Sbjct: 387 MVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 446
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
A K+ + GV ++DGL
Sbjct: 447 CDMAQKIFKKMVSDGVPPDIITYSILLDGL 476
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 180/398 (45%), Gaps = 4/398 (1%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
+ D + M ++ P ++ ++ L++ + + + L ++M +GIP + ++Y
Sbjct: 60 LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY 119
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
+ L++C + + A V M+ P T + +LNG C + A+ + + +
Sbjct: 120 SILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVE 179
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G+ P+ VT+N LI GL + A ++ + G P+ TY T++ + L
Sbjct: 180 MGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 239
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
L +L M++ + Y T+I K + +A D +M T G++ D+ +YN+LI+
Sbjct: 240 ALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLIS 299
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
C G+ A LL +M ++ + T LID K G + A + M + D
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 359
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLL 365
N+ YN +++ ++D A +F M KD TY++++ CKAKR+ +L
Sbjct: 360 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELF 419
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ G+ ++ GL +G A+KI K+
Sbjct: 420 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 457
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 148/295 (50%), Gaps = 5/295 (1%)
Query: 109 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
NGL + + D+A+ +F + K P ++ ++ L+ + K + + +++ + G
Sbjct: 55 NGLSELKL-DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
N TY+ ++ C R + L L +L M + GY D +++ + R+ EA
Sbjct: 114 HNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 173
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
++QMV G + D V++NTLI+ K A L+D M +G + D +T+ +++GLCK
Sbjct: 174 VDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 233
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 344
G+I A L+ M K ++N+ YN I+D L K +D A ++F ME K D FT
Sbjct: 234 RGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 293
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
Y+S++ LC R AS+LL ++ + +++D G EA+K+
Sbjct: 294 YNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKL 348
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 122/263 (46%), Gaps = 4/263 (1%)
Query: 151 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
+L A + E+ S P+ I ++ ++ + K+ + + + M+ G + + Y
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
++ F + +L A + +M+ G + DIV+ ++L+N YC ++ A L+D+M +
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
G++ D T LI GL A ++ M G +L Y +V+ L K G ID A
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 240
Query: 331 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+++ + ME + Y++++ LCK K + A L G++ +++
Sbjct: 241 LSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISC 300
Query: 387 LRHSGCRREAKKIQSKIRMAKIS 409
L + G +A ++ S + KI+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKIN 323
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C++ + + ++++ + P++ TYN +I G + + DL +
Sbjct: 471 ILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 530
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V Y +++ + G +EA+ +F++M P + +N ++ ++ +
Sbjct: 531 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAAS 590
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 155
+ + ++ GFV + T +++I L GRL +
Sbjct: 591 AELIKEMRSCGFVGDASTISMVINML-HDGRLEKS 624
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ + G+ + + G+ P+V+ Y ++I+G R L + L EM E
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 565
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM----ICGDLTPCTATFNIMLNGLCKNRY 116
G PD YN+L+ + G + + ++M GD + + N++ +G + Y
Sbjct: 566 GTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSY 625
Query: 117 TD 118
+
Sbjct: 626 LE 627
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 191/377 (50%), Gaps = 4/377 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ A +L R+ + P+VV YN++I + L++ + DL EM+ G
Sbjct: 196 LIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKG 255
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV +Y++L+ LGK ++A +F MI ++ P TFNI++N CK+
Sbjct: 256 ISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGK 315
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + K G P VTYN L+ G C + A+ I + G P+ +Y+ ++
Sbjct: 316 TVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGF 375
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +K+ + + M RK D Y ++I K GR+ A ++QM GV I
Sbjct: 376 CKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTI 435
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN++++ CK +++ A LL +++ +G + + YT++ILI GLC++G ++ AR E
Sbjct: 436 RTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEG 495
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G + N++ Y ++ +G + A+ + ME + D+ TY ++ +L K
Sbjct: 496 LLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDE 555
Query: 358 LPSASKLLLSCLKSGVR 374
A KLL + GVR
Sbjct: 556 NDMAEKLLREMIARGVR 572
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 184/379 (48%), Gaps = 4/379 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D ++ NR+ +P +N ++ ++ L L +M GI P++ + N L
Sbjct: 67 DDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNIL 126
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
++C QLG A VF ++ P T TF ++ GLC A + GF
Sbjct: 127 INCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGF 186
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+ ++Y LI GLCK G R A +L+ + + PN + Y TI+ + + +
Sbjct: 187 HFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFD 246
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ S M KG + D Y +I+ F +G+L +A D +M+ + ++ D+ ++N L+N +C
Sbjct: 247 LFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFC 306
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K+GK++ + D M KQG + + T+ L+DG C + A+ M + G + +++
Sbjct: 307 KDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQ 366
Query: 313 AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
+Y+ +++ K K D A+N+F+ M + D TYSS++ L K+ R+ A +L+
Sbjct: 367 SYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQM 426
Query: 369 LKSGVRILKSAQKAVVDGL 387
GV +++D L
Sbjct: 427 HDRGVPPTIRTYNSILDAL 445
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 195/408 (47%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +CQ +++ ++ + G PD +T+ +LI G + + D+++ +
Sbjct: 125 ILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVAL 184
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D SY +L+H L ++G+ A + Q + + P +N +++ +CK + + A
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA 244
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G P++VTY+ LI G C G+L A + ++ P+ T+ ++
Sbjct: 245 FDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNA 304
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K K G + M ++G + Y +++ + + + +A M GV D
Sbjct: 305 FCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPD 364
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I SY+ +IN +CK K + A L EM ++ D T++ LIDGL K+G I A ++
Sbjct: 365 IQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVD 424
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M+ G + YN I+D L K ++D AI + ++ K + +TYS ++ LC++
Sbjct: 425 QMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSG 484
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+L A K+ L G + ++ G G EA + SK+
Sbjct: 485 KLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKME 532
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 156/363 (42%), Gaps = 39/363 (10%)
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
SY+S D+A +F ++ + TP FN +L L K+++ L + + +
Sbjct: 52 SYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKM 111
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
+ G P LV NILI C+ G + A + ++ G+ P+ IT+TT++K +
Sbjct: 112 EFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQI 171
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR-------------------------- 221
+ + G+ FD Y T+I K+G
Sbjct: 172 QQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTI 231
Query: 222 ---------LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
+ EA D +M++ G+ D+V+Y+ LI+ +C GKL A L ++M +
Sbjct: 232 IDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENI 291
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
+ D YT IL++ CK G +K + + M K G N YN ++D +++ A +
Sbjct: 292 KPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKS 351
Query: 333 VFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
+F +M D +YS M++ CK K+ A L + + +++DGL
Sbjct: 352 IFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLS 411
Query: 389 HSG 391
SG
Sbjct: 412 KSG 414
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 140/288 (48%), Gaps = 35/288 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++A+C+ G T+ + M + GI P+ VTYNSL+ G ++ + + + M +
Sbjct: 300 ILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG 359
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD+ SY+ +++ ++ K DEA +F++M ++ P T++ +++GL K+ A
Sbjct: 360 GVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYA 419
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L++ + G P + TYN ++ LCK ++ A +L +L D G PN TY+ ++K
Sbjct: 420 LQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIK- 478
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
G C + G+L++A E ++ G L+
Sbjct: 479 ---------------------------GLC-------QSGKLEDARKVFEGLLVKGHNLN 504
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+ +Y +I +C EG A LL +ME G D T+ I+I L K
Sbjct: 505 VDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFK 552
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 35/207 (16%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ +C+ FD + M I PDVVTY+SLI G +++ +S +L L+D+M +
Sbjct: 370 IMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDR 429
Query: 61 GIPPDVWSYNSLMHCLF-----------------------------------QLGKPDEA 85
G+PP + +YNS++ L Q GK ++A
Sbjct: 430 GVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDA 489
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+VF+ ++ T+ IM+ G C + AL + ++ +G +P+ TY I+I
Sbjct: 490 RKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILS 549
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAI 172
L K A +L+E+ G P I
Sbjct: 550 LFKKDENDMAEKLLREMIARGVRPRQI 576
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 112/243 (46%), Gaps = 4/243 (1%)
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
N I+Y++ N + + + + R+ T F + ++ + VK
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
++M G++ ++V+ N LIN +C+ G + A+ + ++ K G+ D T T LI GLC
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 345
G I+ A L + + +GF + +Y ++ L K G+ A+++ + ++ + Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
++++ ++CK K + A L + G+ A++ G G +A + +K+ +
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMIL 288
Query: 406 AKI 408
I
Sbjct: 289 ENI 291
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 203/408 (49%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C +T+L ++ + G P+ +T N+L+ G + SL D+++
Sbjct: 50 ILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQ 109
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D SY +L++ L ++G+ A ++ + + P +N +++GLCK++ + A
Sbjct: 110 GFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEA 169
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G P ++TY+ LI G C AG+L A +L E+ PN TYT +M
Sbjct: 170 YDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDA 229
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K K +L+ M ++G + Y T++ + IG ++ A MV GV +
Sbjct: 230 LCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPN 289
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ SYN +I+ CK +++ A LL E+ + + T++ LIDG CK G I A L+
Sbjct: 290 VYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLK 349
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G +++ Y ++D L K+ +D A +F M+ + + +TY++++ LCK
Sbjct: 350 EMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGG 409
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
R +A KL L G RI ++ GL G EA ++SK+
Sbjct: 410 RHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKME 457
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 193/368 (52%), Gaps = 4/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ + +L + + P+VV YN++I G ++ L++ + DL EM G
Sbjct: 121 LLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V +Y++L++ G+ EA + +MI ++ P T+ I+++ LCK A
Sbjct: 181 IFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAK 240
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K G P +V+YN L+ G C G ++ A+ + + G PN +Y ++
Sbjct: 241 NLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRL 300
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++++ + +L + K + Y ++I F K+GR+ A D +++M G D+
Sbjct: 301 CKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADV 360
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y +L++ CK L+ A L +M+++G + +KYT+T LIDGLCK G K A+ ++
Sbjct: 361 VTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQH 420
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G N+ YN ++ L K+G +D A+ + ME + D+ T+ ++ +L + +
Sbjct: 421 LLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQ 480
Query: 358 LPSASKLL 365
A KLL
Sbjct: 481 NDKAEKLL 488
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 172/342 (50%), Gaps = 4/342 (1%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
+P ++ +N ++ + ++ L +M GI PD+++ N L++C LG+ +
Sbjct: 7 TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
V ++ P T T N ++ GLC +L + GF + V+Y L+ GLC
Sbjct: 67 VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K G R+A +L+ + D PN + Y TI+ +++ ++ S M +G +
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVI 186
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y T+I F G+L EA + +M+ + ++ +Y L++ CKEGK++ A LL M
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVM 246
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
K+G + + ++ L+DG C G ++ A+ M + G + N+ +YN ++DRL K ++
Sbjct: 247 TKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRV 306
Query: 328 DHAIN----VFESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 365
D A+N V V ++ TYSS++ CK R+ SA LL
Sbjct: 307 DEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLL 348
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 202/402 (50%), Gaps = 4/402 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ + + + ++ +M+ GI PD+ T N LI ++ S +L ++L++G
Sbjct: 16 IVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLG 75
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ + N+LM L G+ ++ ++ ++ +LNGLCK T +AL
Sbjct: 76 YQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSAL 135
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ R ++ P +V YN +I GLCK + A + E+ G PN ITY+T++
Sbjct: 136 KLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGF 195
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +L+ M K + + Y ++ A K G++KEA + + M +GV+ ++
Sbjct: 196 CLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNV 255
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
VSYNTL++ YC G+++ A + M ++G + Y++ I+ID LCK+ + A L
Sbjct: 256 VSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLRE 315
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
+ N Y+ ++D K G+I A+++ + M + D TY+S++ LCK +
Sbjct: 316 VLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQN 375
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L A+ L + + G++ K A++DGL G + A+K+
Sbjct: 376 LDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKL 417
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 175/372 (47%), Gaps = 1/372 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ + Y + + M GI P+V+TY++LI G L + LL+EM+
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKN 215
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V++Y LM L + GK EA + M + P ++N +++G C NA
Sbjct: 216 INPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAK 275
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+MF + + G P + +YNI+I LCK+ R+ A +L+E+ PN +TY++++
Sbjct: 276 QMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGF 335
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + L++L M +G D Y +++ A K L +AT +M G+Q +
Sbjct: 336 CKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNK 395
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y LI+ CK G+ + A L + +G + +T+ ++I GLCK G + A
Sbjct: 396 YTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSK 455
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSA 361
M + G + + I+ L + + D A + M KD + H A
Sbjct: 456 MEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLLRFRDF-HGERSPNENDKA 514
Query: 362 SKLLLSCLKSGV 373
KLL + G+
Sbjct: 515 EKLLHEMIAKGL 526
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 153/329 (46%), Gaps = 39/329 (11%)
Query: 98 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 157
TP FN ++ L K ++ A+ +F+ +Q G P+L T NILI C G++ +
Sbjct: 7 TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66
Query: 158 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 217
+L ++ G+ PN IT T+MK + K L + +G+ D Y T++
Sbjct: 67 VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126
Query: 218 KIGRLK-----------------------------------EATDYMEQMVTDGVQLDIV 242
KIG + EA D +M G+ +++
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVI 186
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
+Y+TLI +C G+L A+ LL+EM + + YT+TIL+D LCK G +K A+ L M
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVM 246
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 358
K G N+ +YN ++D G++ +A +F +M K + ++Y+ M+ LCK+KR+
Sbjct: 247 TKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRV 306
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGL 387
A LL L + +++DG
Sbjct: 307 DEAMNLLREVLHKNMVPNTVTYSSLIDGF 335
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 144/305 (47%), Gaps = 36/305 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+DA C+ +L M + G+ P+VV+YN+L+ G + + + M++
Sbjct: 225 ILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQK 284
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V+SYN ++ L + + DEA + ++++ ++ P T T++ +++G CK +A
Sbjct: 285 GVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSA 344
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + + G ++VTY L+ LCK L A + ++ + G PN TYT ++
Sbjct: 345 LDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALID- 403
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
G C K GR K A + ++ G +++
Sbjct: 404 ---------------------------GLC-------KGGRHKNAQKLFQHLLVKGCRIN 429
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC-KAGNIKGARLHL 299
+ +YN +I+ CKEG L+ A + +ME+ G D T I+I L K N K +L
Sbjct: 430 VWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLH 489
Query: 300 EYMNK 304
E + K
Sbjct: 490 EMIAK 494
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 203/407 (49%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ YC ++++M E G PD +T+ +LI G ++ S ++ L+D M++ G
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P++ +Y +++ L + G D A + M + FN +++ LCK R+ D+AL
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ ++ G P +VTY+ LI LC GR A +L ++ + PN +T+ ++
Sbjct: 281 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 340
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K+ ++ M ++ D F Y +++ F RL +A E MV+ D+
Sbjct: 341 VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDV 400
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTLI +CK ++E L EM +G D T+T LI GL G+ A+ +
Sbjct: 401 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVK-DSFTYSSMVHNLCKAKR 357
M G ++ Y+ ++D L +GK++ A+ VF+ M E+K D + Y++M+ +CKA +
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ L S GV+ ++ GL +EA + K++
Sbjct: 521 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 180/353 (50%), Gaps = 4/353 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++ C+ D +LN+M A I DVV +N++I + + +L+L EM
Sbjct: 230 VVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 289
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+V +Y+SL+ CL G+ +A+++ DMI + P TFN +++ K A
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 349
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + K P++ TYN L+ G C RL A+ + + + P+ +TY T++K
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++++ + G E+ M +G D Y T+I G A +QMV+DGV D
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++Y+ L++ C GKLE A + D M+K + D Y +T +I+G+CKAG +
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 529
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
++ G N+ YN ++ L + A + + M+ + +S TY++++
Sbjct: 530 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 167/329 (50%), Gaps = 1/329 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + + +L+ M E I+P++VT+N+LI + + L D+M++
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+++YNSL++ + D+A ++F+ M+ D P T+N ++ G CK++ ++
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + G V + VTY LI+GL G A+ + K++ G P+ +TY+ ++
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N K + LE+ M++ D + Y T+I K G++ + D + GV+ ++
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 540
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNT+I+ C + L+ AY LL +M++ G + T+ LI + G+ + +
Sbjct: 541 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIRE 600
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
M F + + + L DG++D +
Sbjct: 601 MRSCRFVGDASTIGLVANML-HDGRLDKS 628
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 194/411 (47%), Gaps = 4/411 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + FD ++ +M+ I + TYN LI R S +S +L LL +M+++G
Sbjct: 91 LLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLG 150
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + + +SL++ + +A + M+ P T TF +++GL + A+
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P LVTY +++ GLCK G A +L ++ + + + + TI+
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 270
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R L + M+ KG + Y ++I+ GR +A+ + M+ + ++
Sbjct: 271 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++N LI+ + KEGK A L D+M K+ + D +T+ L++G C + A+ E+
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M ++ YN ++ K +++ +F M V D+ TY++++ L
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+A K+ + GV ++DGL ++G +A ++ ++ ++I
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 173/375 (46%), Gaps = 4/375 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P +V +N L++ + + L ++M + I +++YN L++C + + A +
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
M+ P T + +LNG C + +A+ + + + G+ P+ +T+ LI GL
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
+ A ++ + G PN +TY ++ + L L +L+ M+ D
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
+ T+I + K + +A + ++M T G++ ++V+Y++LI+ C G+ A LL +M
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
++ + T LID K G A + M K D ++ YN +V+ ++D
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 329 HAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 384
A +FE M KD F TY++++ CK+KR+ ++L G+ ++
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 385 DGLRHSGCRREAKKI 399
GL H G A+K+
Sbjct: 443 QGLFHDGDCDNAQKV 457
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 142/324 (43%), Gaps = 39/324 (12%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K D+A +F M+ P FN +L+ + K + D + + +Q+ V L TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
ILI C+ ++ A +L ++ G+ P+ +T ++++ ++ + ++ M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG----- 255
GY D + T+I + EA +++MV G Q ++V+Y ++N CK G
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 256 -----KLEAAYL-------------------------LLDEMEKQGFECDKYTHTILIDG 285
K+EAA + L EME +G + T++ LI
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 341
LC G A L M + + NL +N ++D K+GK A +++ M + D
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 342 SFTYSSMVHNLCKAKRLPSASKLL 365
FTY+S+V+ C RL A ++
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMF 388
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 88/183 (48%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D + +M G+ PD++TY+ L+ G N L +L++ D M + I D++ Y ++
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ + + GK D+ +F + + P T+N M++GLC R A + + +++ G
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+P TYN LI+ + G + +++E+ +A T + R K L+
Sbjct: 572 LPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLD 631
Query: 193 ILS 195
+LS
Sbjct: 632 MLS 634
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 127/308 (41%), Gaps = 40/308 (12%)
Query: 106 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
I+ NGL + D+A+ +F G+ K +P +V +N L+ + K + + +++
Sbjct: 56 ILRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
TY ++ C R + L L +L M + GY
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGY----------------------- 151
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ IV+ ++L+N YC ++ A L+D+M + G+ D T T LI G
Sbjct: 152 ------------EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 199
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 341
L A ++ M + G NL Y +V+ L K G D A+N+ ME D
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 259
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
+++++ +LCK + + A L G+R +++ L G +A ++ S
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 402 KIRMAKIS 409
+ KI+
Sbjct: 320 DMIEKKIN 327
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ D G+ + + G+ P+VVTYN++I+G LL + LL +M E G
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM----ICGDLTPCTATFNIMLNGLCKNRYT 117
P+ +YN+L+ + G + + ++M GD + N++ +G +
Sbjct: 571 PLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFL 630
Query: 118 D 118
D
Sbjct: 631 D 631
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 203/407 (49%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ YC ++++M E G PD +T+ +LI G ++ S ++ L+D M++ G
Sbjct: 123 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 182
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P++ +Y +++ L + G D A + M + FN +++ LCK R+ D+AL
Sbjct: 183 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 242
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ ++ G P +VTY+ LI LC GR A +L ++ + PN +T+ ++
Sbjct: 243 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 302
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K+ ++ M ++ D F Y +++ F RL +A E MV+ D+
Sbjct: 303 VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDV 362
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTLI +CK ++E L EM +G D T+T LI GL G+ A+ +
Sbjct: 363 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 422
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVK-DSFTYSSMVHNLCKAKR 357
M G ++ Y+ ++D L +GK++ A+ VF+ M E+K D + Y++M+ +CKA +
Sbjct: 423 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 482
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ L S GV+ ++ GL +EA + K++
Sbjct: 483 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 529
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 180/353 (50%), Gaps = 4/353 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++ C+ D +LN+M A I DVV +N++I + + +L+L EM
Sbjct: 192 VVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 251
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+V +Y+SL+ CL G+ +A+++ DMI + P TFN +++ K A
Sbjct: 252 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 311
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + K P++ TYN L+ G C RL A+ + + + P+ +TY T++K
Sbjct: 312 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 371
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++++ + G E+ M +G D Y T+I G A +QMV+DGV D
Sbjct: 372 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 431
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++Y+ L++ C GKLE A + D M+K + D Y +T +I+G+CKAG +
Sbjct: 432 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 491
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
++ G N+ YN ++ L + A + + M+ + +S TY++++
Sbjct: 492 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 544
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 167/329 (50%), Gaps = 1/329 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + + +L+ M E I+P++VT+N+LI + + L D+M++
Sbjct: 263 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 322
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+++YNSL++ + D+A ++F+ M+ D P T+N ++ G CK++ ++
Sbjct: 323 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 382
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + G V + VTY LI+GL G A+ + K++ G P+ +TY+ ++
Sbjct: 383 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 442
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N K + LE+ M++ D + Y T+I K G++ + D + GV+ ++
Sbjct: 443 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 502
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNT+I+ C + L+ AY LL +M++ G + T+ LI + G+ + +
Sbjct: 503 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIRE 562
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
M F + + + L DG++D +
Sbjct: 563 MRSCRFVGDASTIGLVANML-HDGRLDKS 590
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 194/411 (47%), Gaps = 4/411 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + FD ++ +M+ I + TYN LI R S +S +L LL +M+++G
Sbjct: 53 LLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLG 112
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + + +SL++ + +A + M+ P T TF +++GL + A+
Sbjct: 113 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 172
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P LVTY +++ GLCK G A +L ++ + + + + TI+
Sbjct: 173 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 232
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R L + M+ KG + Y ++I+ GR +A+ + M+ + ++
Sbjct: 233 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 292
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++N LI+ + KEGK A L D+M K+ + D +T+ L++G C + A+ E+
Sbjct: 293 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 352
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M ++ YN ++ K +++ +F M V D+ TY++++ L
Sbjct: 353 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 412
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+A K+ + GV ++DGL ++G +A ++ ++ ++I
Sbjct: 413 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 463
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 173/375 (46%), Gaps = 4/375 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P +V +N L++ + + L ++M + I +++YN L++C + + A +
Sbjct: 45 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 104
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
M+ P T + +LNG C + +A+ + + + G+ P+ +T+ LI GL
Sbjct: 105 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 164
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
+ A ++ + G PN +TY ++ + L L +L+ M+ D
Sbjct: 165 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 224
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
+ T+I + K + +A + ++M T G++ ++V+Y++LI+ C G+ A LL +M
Sbjct: 225 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 284
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
++ + T LID K G A + M K D ++ YN +V+ ++D
Sbjct: 285 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 344
Query: 329 HAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 384
A +FE M KD F TY++++ CK+KR+ ++L G+ ++
Sbjct: 345 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 404
Query: 385 DGLRHSGCRREAKKI 399
GL H G A+K+
Sbjct: 405 QGLFHDGDCDNAQKV 419
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 141/324 (43%), Gaps = 39/324 (12%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K D+A +F M+ P FN +L+ + K + D + + +Q+ V L TYN
Sbjct: 27 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 86
Query: 141 ILI-----------------------------------KGLCKAGRLRTARWILKELGDS 165
ILI G C R+ A ++ ++ +
Sbjct: 87 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 146
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
G+ P+ IT+TT++ F + K + ++ M ++G + Y V+ K G A
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 206
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ + +M ++ D+V +NT+I+ CK ++ A L EME +G + T++ LI
Sbjct: 207 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 266
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 341
LC G A L M + + NL +N ++D K+GK A +++ M + D
Sbjct: 267 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 326
Query: 342 SFTYSSMVHNLCKAKRLPSASKLL 365
FTY+S+V+ C RL A ++
Sbjct: 327 IFTYNSLVNGFCMHDRLDKAKQMF 350
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 88/183 (48%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D + +M G+ PD++TY+ L+ G N L +L++ D M + I D++ Y ++
Sbjct: 414 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 473
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ + + GK D+ +F + + P T+N M++GLC R A + + +++ G
Sbjct: 474 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 533
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+P TYN LI+ + G + +++E+ +A T + R K L+
Sbjct: 534 LPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLD 593
Query: 193 ILS 195
+LS
Sbjct: 594 MLS 596
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 127/308 (41%), Gaps = 40/308 (12%)
Query: 106 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
I+ NGL + D+A+ +F G+ K +P +V +N L+ + K + + +++
Sbjct: 18 ILRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 76
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
TY ++ C R + L L +L M + GY
Sbjct: 77 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGY----------------------- 113
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ IV+ ++L+N YC ++ A L+D+M + G+ D T T LI G
Sbjct: 114 ------------EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 161
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 341
L A ++ M + G NL Y +V+ L K G D A+N+ ME D
Sbjct: 162 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 221
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
+++++ +LCK + + A L G+R +++ L G +A ++ S
Sbjct: 222 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 281
Query: 402 KIRMAKIS 409
+ KI+
Sbjct: 282 DMIEKKIN 289
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ D G+ + + G+ P+VVTYN++I+G LL + LL +M E G
Sbjct: 473 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 532
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM----ICGDLTPCTATFNIMLNGLCKNRYT 117
P+ +YN+L+ + G + + ++M GD + N++ +G +
Sbjct: 533 PLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFL 592
Query: 118 D 118
D
Sbjct: 593 D 593
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 209/443 (47%), Gaps = 39/443 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ +L +M + G PD+VT NSL+ G + +S ++ L+ +M+EM
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN------ 114
G PD +++N+L+H LF+ + EA + M+ P T+ I++NGLCK
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 115 -----------------------------RYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+ ++AL +F + G P +VTYN LI+
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LC GR A +L ++ + PN +T++ ++ + K ++ M ++ D
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
F Y ++I F RL EA E M++ ++V+YNTLI +CK +++ L
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM ++G + T+T LI G +A A++ + M G ++ Y+ ++D L +G
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
K++ A+ VFE ++ D +TY+ M+ +CKA ++ L S GV+
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540
Query: 382 AVVDGLRHSGCRREAKKIQSKIR 404
++ G G + EA + +++
Sbjct: 541 TMMSGFCRKGLKEEADALFREMK 563
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 184/354 (51%), Gaps = 4/354 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++ C+ D ++L +M + I P VV YN++I ++ +L+L EM
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+V +YNSL+ CL G+ +A+R+ DMI + P TF+ +++ K A
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + K P++ TY+ LI G C RL A+ + + + PN +TY T++K
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 405
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ G+E+ M ++G + Y T+I F + A +QMV+DGV D
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD 465
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++Y+ L++ C GK+E A ++ + +++ E D YT+ I+I+G+CKAG ++
Sbjct: 466 IMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVH 350
++ G N+ Y ++ + G + A +F M+ + DS TY++++
Sbjct: 526 SLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR 579
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 194/394 (49%), Gaps = 4/394 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + FD ++ +M+ GIS ++ TY+ LI R S LS +L +L +M+++G
Sbjct: 87 LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLG 146
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ + NSL++ + +A + M+ P + TFN +++GL ++ A+
Sbjct: 147 YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P+LVTY I++ GLCK G + A +LK++ P + Y TI+
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ L + + M KG + Y ++I GR +A+ + M+ + ++
Sbjct: 267 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 326
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+++ LI+ + KEGKL A L DEM K+ + D +T++ LI+G C + A+ E
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 386
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M N+ YN ++ K ++D + +F M V ++ TY++++H +A+
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+A + + GV ++DGL ++G
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 143/290 (49%), Gaps = 4/290 (1%)
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
D+A+ +F + K P +V ++ L+ + K + + +++ + G + N TY+ +
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ C R + L L +L+ M + GY D +++ F R+ +A + QMV G
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
Q D ++NTLI+ + + A L+D M +G + D T+ I+++GLCK G+I A
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 353
L+ M + + + YN I+D L ++ A+N+F M+ K + TY+S++ LC
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
R AS+LL ++ + A++D G EA+K+ ++
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 134/297 (45%), Gaps = 4/297 (1%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K D+A +F DM+ P F+ +L+ + K D + + +Q G L TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
ILI C+ +L A +L ++ G+ P+ +T +++ + + ++ M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
GY D F + T+I + R EA +++MV G Q D+V+Y ++N CK G ++ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
LL +ME+ E + +ID LC N+ A M+ G N+ YN ++
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
L G+ A + M + + T+S+++ K +L A KL +K +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C + + ++ + + PD+ TYN +I G + + DL +
Sbjct: 471 ILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 530
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V +Y ++M + G +EA+ +F++M P + T+N ++ ++ +
Sbjct: 531 GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAAS 590
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
+ R ++ FV + T L+ + GRL
Sbjct: 591 AELIREMRSCRFVGDASTIG-LVTNMLHDGRL 621
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 58/124 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ + G+ + + G+ P+VVTY ++++G R L + L EM E
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD +YN+L+ + G + + ++M +T ++ N L R +
Sbjct: 566 GPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDGRLDKSF 625
Query: 121 LRMF 124
L+M
Sbjct: 626 LKML 629
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 188/358 (52%), Gaps = 1/358 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ C+ I + +R+ G+ P V++N+LI G ++ L L M E
Sbjct: 237 VLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEF 296
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PDV++Y++L+ L + + ++AN +F++M L P TF ++NG CKN D A
Sbjct: 297 RVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLA 356
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +++ + G +LV YN LI GLCK G R AR + E+ G P+ TYTT++
Sbjct: 357 LEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDG 416
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ +L LE+ M ++G D + +I+ + G++ +A + +M+ G++ D
Sbjct: 417 SCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPD 476
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y +++ +CK+G ++ + LL EM+ G T+ +L++GLCK G +K A + L
Sbjct: 477 DGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLN 536
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-VKDSFTYSSMVHNLCKAKR 357
M +G + YN ++ K GK+ NV M V D +Y S++H L KA +
Sbjct: 537 AMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEMGLVSDYASYRSLLHELSKASK 594
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 171/328 (52%), Gaps = 4/328 (1%)
Query: 50 SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 109
+L+ E+L+ G PP+V+++N LM+ L + GK +A +F ++ L P +FN ++N
Sbjct: 216 ALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLIN 275
Query: 110 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 169
G CK+ + R+ +++ P++ TY+ LI GLCK +L A + KE+ D G P
Sbjct: 276 GYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVP 335
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
N +T+TT++ +N + L LEI M KG D Y T+I K G +EA ++
Sbjct: 336 NDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFV 395
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
+M G+ D +Y TL++ CKEG LE A + EM K+G + D T +I GLC+
Sbjct: 396 GEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRD 455
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 345
G I A L M + G + Y ++D K G + + + M+ + TY
Sbjct: 456 GKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITY 515
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ +++ LCK ++ +A LL + L GV
Sbjct: 516 NVLMNGLCKQGQVKNADMLLNAMLNLGV 543
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 139/276 (50%), Gaps = 4/276 (1%)
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
AL + + G+ P + T+N+L+ LCK G+++ A+ I E+ +G P A+++ T++
Sbjct: 216 ALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLIN 275
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
++ + G + M+ D F Y +I K +L++A ++M G+
Sbjct: 276 GYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVP 335
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ V++ TLIN CK G+++ A + +M +G + D + LIDGLCK G + AR +
Sbjct: 336 NDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFV 395
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
M K G + Y ++D K+G ++ A+ + + M + D+ +++++ LC+
Sbjct: 396 GEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRD 455
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
++ A + L L++G++ V+DG G
Sbjct: 456 GKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKG 491
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 148/333 (44%), Gaps = 5/333 (1%)
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTA-TFNIMLNGLCKNRYTDNALRMFRGLQK 129
SL+H + A+ VF ++ T ++ F+ +++ + Y +A++ FR +K
Sbjct: 131 SLLHFVVSRKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKK 190
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
H L++ + K A E+ DSG+ PN T+ +M + K K
Sbjct: 191 HNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKD 250
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
I +++ G + T+I + K G L+E M V D+ +Y+ LI+
Sbjct: 251 AQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALID 310
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
CKE +LE A L EM +G + T T LI+G CK G + A + M G +
Sbjct: 311 GLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKA 370
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
+L YN ++D L K G A M + D FTY++++ CK L A ++
Sbjct: 371 DLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMR 430
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
+K G+++ A A++ GL G +A++
Sbjct: 431 KEMVKEGIQLDNVAFTAIISGLCRDGKIVDAER 463
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 199/400 (49%), Gaps = 4/400 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLI+ + Q D G+++L ++ + G+ +VT+N+LI G + +++L D+M+
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVAR 221
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +Y ++++ L ++G+ A +F+ M P T++ +++ LCK+R + A
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 281
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F ++ G P + TYN LI+GLC R R A +L E+ PN +T++ ++
Sbjct: 282 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 341
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ +L M G + Y +++ + + EA + M+T G + D
Sbjct: 342 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPD 401
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ SYN LIN YCK ++ A L +EM QG D ++ LIDGLC+ G ++ A +
Sbjct: 402 VFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFK 461
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
M G +L Y+ ++D K G + A +F +M+ + Y+ ++ +CK++
Sbjct: 462 NMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSR 521
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
L A KL G++ +++GL G EA
Sbjct: 522 NLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEA 561
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 190/368 (51%), Gaps = 4/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ A + +M EAG PDVVTY+++I ++ ++ +LD+ M G
Sbjct: 233 IINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKG 292
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P++++YNSL+ L + EA+ + +M+ ++ P TF++++N CK A
Sbjct: 293 ISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEAR 352
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + + G P +VTY+ L+ G + AR + + G P+ +Y ++
Sbjct: 353 GVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGY 412
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ ++ + M +G T D Y T+I ++GRL+EA D + M+T+G D+
Sbjct: 413 CKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDL 472
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y+ L++ +CK+G L A+ L M+ + + + ILID +CK+ N+K AR
Sbjct: 473 CTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSE 532
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G N++ Y I++ L K+G +D A+ F +ME + F+Y+ ++ + K
Sbjct: 533 LFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKD 592
Query: 358 LPSASKLL 365
A +L+
Sbjct: 593 ESRAVQLI 600
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 209/435 (48%), Gaps = 40/435 (9%)
Query: 9 FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM-GIPPDVW 67
F + D N M P ++ +N L++ + ++ L + +E+ G+ PD +
Sbjct: 99 FRNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTY 158
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+ + L++C FQL + D V +I L TFN ++NGLCK A+ +F +
Sbjct: 159 TLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDM 218
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
G+ P++ TY +I GLCK G A + +++G++G P+ +TY+TI+ ++R+
Sbjct: 219 VARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRV 278
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
L+I S MK KG + + F Y ++I R +EA+ + +M++ + +IV+++ L
Sbjct: 279 NEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLL 338
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFE---------------------------------- 273
IN++CKEG + A +L M + G E
Sbjct: 339 INIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGC 398
Query: 274 -CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
D +++ ILI+G CKA I A+ M G ++ +YN ++D L + G++ A +
Sbjct: 399 KPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHD 458
Query: 333 VFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
+F++M + D TYS ++ CK L A +L + + ++ ++D +
Sbjct: 459 LFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMC 518
Query: 389 HSGCRREAKKIQSKI 403
S +EA+K+ S++
Sbjct: 519 KSRNLKEARKLFSEL 533
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 154/310 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C F + +LN M I P++VT++ LI + + + +L M EMG
Sbjct: 303 LIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMG 362
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V +Y+SLM+ + EA ++F MI P ++NI++NG CK + A
Sbjct: 363 VEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAK 422
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + G P++V+YN LI GLC+ GRLR A + K + +G+ P+ TY+ ++
Sbjct: 423 QLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGF 482
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + AM+ + Y +I A K LKEA ++ G+Q ++
Sbjct: 483 CKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNV 542
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
Y T+IN CKEG L+ A ME+ G +++++ ++I G + + A +
Sbjct: 543 QIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGE 602
Query: 302 MNKIGFDSNL 311
M + GF +++
Sbjct: 603 MREKGFVADV 612
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 143/278 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ + +L M E G+ P+VVTY+SL+ G + + + + L D M+
Sbjct: 337 LLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITK 396
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV+SYN L++ + + EA ++F +MI LTP ++N +++GLC+ A
Sbjct: 397 GCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREA 456
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ + +G +P+L TY+IL+ G CK G L A + + + + PN + Y ++
Sbjct: 457 HDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDA 516
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++R K ++ S + +G + Y T+I K G L EA + M DG +
Sbjct: 517 MCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPN 576
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
SYN +I + + A L+ EM ++GF D T
Sbjct: 577 EFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 84/193 (43%), Gaps = 5/193 (2%)
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD-EMEKQGFECDKYTHT 280
+ +A Y M+ + I+ +N L++ K A + L +ME G D YT
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLH 161
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
+LI+ + + L + K+G + +N +++ L K GK A+ +F+ M +
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVAR 221
Query: 341 ----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
D TY+++++ LCK +A+ L ++G + ++D L EA
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 281
Query: 397 KKIQSKIRMAKIS 409
I S ++ IS
Sbjct: 282 LDIFSYMKAKGIS 294
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 193/398 (48%), Gaps = 3/398 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C +L +M +G+ P+VV Y++LI G + + LLD M G
Sbjct: 156 MINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSG 215
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD++ YN+++ CL + GK +EA+ ++ L P TF + G K A
Sbjct: 216 VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAA 275
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ F + HG +P Y +LI G KAG L A I + L G P+ T + +
Sbjct: 276 KYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGL 335
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N + + L++ S +K KG D F Y ++I+ F K G +++A + ++M G+ +I
Sbjct: 336 LKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 395
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
YN L++ CK G ++ A L D M ++G E D T++ +IDG CK+ N+ A
Sbjct: 396 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 455
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---DSFTYSSMVHNLCKAKRL 358
M G + YN +V K+G ++ A+N+F M K + ++++++ CK+ ++
Sbjct: 456 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKI 515
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
AS+L + + V+D +G EA
Sbjct: 516 QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEA 553
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 195/397 (49%), Gaps = 4/397 (1%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
C+ + M++ G+ PD ++LI G R + L + D M+ GIP ++
Sbjct: 21 CRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINL 80
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
+YN L+H L + GK ++A + + MI P + TF +++ G C+ AL +
Sbjct: 81 ITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDE 140
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
++K VP V+Y +I GLC L A +L+++ SG PN + Y+T++ +
Sbjct: 141 MEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGR 200
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
+ +L M G D F Y +I+ K G+++EA+ Y+ ++ G++ D V++
Sbjct: 201 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 260
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
I Y K GK+ A DEM G + +T+LI+G KAGN+ A +++ +G
Sbjct: 261 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 320
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSAS 362
+++ + + L K+G++ A+ VF ++ V D FTYSS++ CK + A
Sbjct: 321 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 380
Query: 363 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+L G+ A+VDGL SG + A+K+
Sbjct: 381 ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKL 417
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 193/403 (47%), Gaps = 5/403 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ + +L+ M + + P V+Y ++I G LS + LL++M
Sbjct: 120 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 179
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V Y++L+ G+ +EA R+ M C + P +N +++ L K + A
Sbjct: 180 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 239
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+Q G P+ VT+ I G K G++ A E+ D G PN YT ++
Sbjct: 240 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 299
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+ L I + G D I +K GR++EA ++ G+ D
Sbjct: 300 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 359
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +Y++LI+ +CK+G++E A+ L DEM +G + + + L+DGLCK+G+I+ AR +
Sbjct: 360 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 419
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + G + + Y+ ++D K + A ++F M K SF Y+++VH CK
Sbjct: 420 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 479
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ A L L+ G S ++DG S +EA ++
Sbjct: 480 DMEKAMNLFREMLQKGFATTLSFN-TLIDGYCKSCKIQEASQL 521
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 172/354 (48%), Gaps = 22/354 (6%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + ++E G+ PDV TY+SLI+G + + + +L DEM GI P+++ YN+L+ L
Sbjct: 347 VFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLC 406
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G A ++F M L P + T++ M++G CK+ A +F + G P
Sbjct: 407 KSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF 466
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
YN L+ G CK G + A + +E+ G A +++ T++ ++ K + ++ M
Sbjct: 467 VYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEM 525
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEAT-----------------DYMEQMVTDGVQLD 240
K D Y TVI K G+++EA E+MV GV+ D
Sbjct: 526 IAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPD 585
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+Y +I +CKE L A+ L DE+ +G H +LI LCK ++ A L+
Sbjct: 586 EVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLD 645
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVH 350
M ++G +L A + +V + GK+D A VFE ++ V D+ T +V+
Sbjct: 646 EMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVN 699
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 200/427 (46%), Gaps = 32/427 (7%)
Query: 9 FVSFDAGYTILNRMREA----------GISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
F +F GY+ +M EA G+ P+ Y LI G + L +L + +
Sbjct: 258 FGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLH 317
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
+G+ PDV + ++ +H L + G+ EA +VF ++ L P T++ +++G CK +
Sbjct: 318 ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVE 377
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A + + G P + YN L+ GLCK+G ++ AR + + + G P+++TY+T++
Sbjct: 378 KAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMI 437
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
++ + M KG F Y ++ K G +++A + +M+ G
Sbjct: 438 DGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA 497
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+ S+NTLI+ YCK K++ A L EM + D T+T +ID CKAG ++ A L
Sbjct: 498 TTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLL 556
Query: 299 LEYMNK--IGFDSNLEAYNCIVDRLGKDGKIDHAI---------NVFESMEVKDSFTYSS 347
+ M + + D+ + +V + K ++ + + N+ E+ +++D
Sbjct: 557 FKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKG 616
Query: 348 M-----VHNL-----CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
M +H+L CK + L ASKLL + G++ +A +V +G EA
Sbjct: 617 MLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEAT 676
Query: 398 KIQSKIR 404
++ ++
Sbjct: 677 RVFEGVK 683
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 142/301 (47%), Gaps = 18/301 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+ + + M E G+ PD VTY+++I G ++ ++ + L EM G
Sbjct: 401 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 460
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P + YN+L+H + G ++A +F++M+ T +FN +++G CK+ A
Sbjct: 461 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEAS 519
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD----------------- 164
++F+ + +P+ VTY +I CKAG++ A + KE+ +
Sbjct: 520 QLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVA 579
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
G P+ +TY ++ + ++ + KG G + +I A K L E
Sbjct: 580 KGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTE 639
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A+ +++M G++ + + +TL+ + + GK++ A + + ++ G D T L++
Sbjct: 640 ASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVN 699
Query: 285 G 285
G
Sbjct: 700 G 700
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 67/150 (44%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D + + +M G+ PD VTY +I + L + L DE++ G+ ++ L
Sbjct: 568 DTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLL 627
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ L + EA+++ +M L P A + ++ + D A R+F G++ G
Sbjct: 628 ITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGL 687
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKEL 162
VP+ T L+ G AR ++K+L
Sbjct: 688 VPDTTTLIDLVNGNLNDTDSEDARNLIKQL 717
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 65/127 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I A+C+ + + + + + G+ ++ LI + L+ + LLDEM E+
Sbjct: 591 LVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGEL 650
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P + + ++L+ + GK DEA RVF+ + L P T T ++NG + +++A
Sbjct: 651 GLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDA 710
Query: 121 LRMFRGL 127
+ + L
Sbjct: 711 RNLIKQL 717
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 187/365 (51%), Gaps = 4/365 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ YC++ DA ++ M + PD TY +I G + +L LLD+ML+ G
Sbjct: 115 LVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRG 171
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y L+ + + EA V +M TP T+N+++NG+C+ D+A
Sbjct: 172 CQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAK 231
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L +GF P++V+Y ++KGLC A R + + E+ D PN +T+ +++
Sbjct: 232 EILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFF 291
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + +++L M + G T + VI A K GR+ +A D++ M G D
Sbjct: 292 CRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDT 351
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+SY T++ C+ G+ E A LL EM ++ ++ T I LC+ G I+ A +E
Sbjct: 352 ISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIEL 411
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-DSFTYSSMVHNLCKAKRLPS 360
M + G + YN +V G++D A+ +F ++ + ++ TY++++ LC A+RL +
Sbjct: 412 MPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDA 471
Query: 361 ASKLL 365
A++LL
Sbjct: 472 AAELL 476
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 198/408 (48%), Gaps = 7/408 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++A C+ F +L+ MR G +P++VTYN +I G R + + ++L+ +
Sbjct: 181 VLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSY 240
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ SY +++ L + D+ +F +M+ P TF++++ C+ + A
Sbjct: 241 GFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERA 300
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + + +HG P NI+I +CK GR+ A L +G G P+ I+YTT+++
Sbjct: 301 IQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRG 360
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R +++ E+L M RK + + T I + G +++A +E M G +
Sbjct: 361 LCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVG 420
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+YN L++ +C +G++++A L + + E + T+T L+ GLC A + A L
Sbjct: 421 IVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGLCHAERLDAAAELLA 477
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + N +N +V + G ++ A+ + M + T+++++ + K
Sbjct: 478 GMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDC 537
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
A +LL + GV + +VVD L EA ++ ++
Sbjct: 538 NSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQ 585
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 160/346 (46%), Gaps = 3/346 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+A C+ D Y LN M G +PD ++Y +++ G R + +LL EM+
Sbjct: 321 IVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRK 380
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PP+ ++N+ + L Q G ++A ++ + M + T+N +++G C D+A
Sbjct: 381 NCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSA 440
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F L P +TY L+ GLC A RL A +L + NA+T+ ++
Sbjct: 441 LELFNNLPCE---PNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSF 497
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + +E+++ M G T + + T++ K +EA + + +V+ GV LD
Sbjct: 498 FCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLD 557
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++Y++++++ +E + E A +L ++ G + ++ LCK A
Sbjct: 558 TITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFA 617
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYS 346
YM G N Y +++ L +G + A V + K + S
Sbjct: 618 YMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVLSKS 663
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 139/299 (46%), Gaps = 44/299 (14%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
++ LC+ T +A R+ R + G ++ YN L+ G C+ GRL AR ++ +
Sbjct: 80 LIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM---P 136
Query: 167 HAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
P+A TYT I++ C R R L +L M ++G Y ++ A K EA
Sbjct: 137 VPPDAYTYTPIIRGLCDRGRVGD-ALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEA 195
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ +++M G +IV+YN +IN C+EG+++ A +L+ + GF+ D ++T ++ G
Sbjct: 196 MNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKG 255
Query: 286 LCKA-----------------------------------GNIKGARLHLEYMNKIGFDSN 310
LC A G ++ A L+ M++ G N
Sbjct: 256 LCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPN 315
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 365
N +++ + K G++D A + +M + D+ +Y++++ LC+A R A +LL
Sbjct: 316 TTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELL 374
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 110/250 (44%), Gaps = 7/250 (2%)
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A R+ G P++ LI+ LC+ GR A +L+ SG + Y T++
Sbjct: 58 AARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVA 117
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
R + ++++M D + Y +I GR+ +A ++ M+ G Q
Sbjct: 118 GYCRYGRLDAARRLIASMPVPP---DAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQP 174
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+V+Y L+ CK A +LDEM +G + T+ ++I+G+C+ G + A+ L
Sbjct: 175 SVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEIL 234
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
++ GF ++ +Y ++ L + D +F M V + T+ +V C+
Sbjct: 235 NRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRG 294
Query: 356 KRLPSASKLL 365
+ A ++L
Sbjct: 295 GMVERAIQVL 304
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 99/210 (47%), Gaps = 7/210 (3%)
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
L A +++ G AP+ T +++ R + +L + G D F Y T
Sbjct: 55 LAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNT 114
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
++A + + GRL A + M V D +Y +I C G++ A LLD+M ++G
Sbjct: 115 LVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRG 171
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
+ T+T+L++ +CK+ A L+ M G N+ YN I++ + ++G++D A
Sbjct: 172 CQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAK 231
Query: 332 NVFESMEV----KDSFTYSSMVHNLCKAKR 357
+ + D +Y++++ LC A+R
Sbjct: 232 EILNRLSSYGFQPDIVSYTTVLKGLCAARR 261
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 17/153 (11%)
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
L A L++ +G D Y T LI LC+ G A L G ++ AYN
Sbjct: 55 LAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNT 114
Query: 317 IVDRLGKDGKIDHAINVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR- 374
+V + G++D A + SM V D++TY+ ++ LC R+ A LL L+ G +
Sbjct: 115 LVAGYCRYGRLDAARRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQP 174
Query: 375 -------ILKSAQKA--------VVDGLRHSGC 392
+L++ K+ V+D +R GC
Sbjct: 175 SVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGC 207
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 75/186 (40%), Gaps = 7/186 (3%)
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
L EA +E + G D+ LI C+ G+ A +L E G D + +
Sbjct: 55 LAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNT 114
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 340
L+ G C+ G + AR + M + Y I+ L G++ A+ + + M +
Sbjct: 115 LVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRG 171
Query: 341 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
TY+ ++ +CK+ A +L G +++G+ G +AK
Sbjct: 172 CQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAK 231
Query: 398 KIQSKI 403
+I +++
Sbjct: 232 EILNRL 237
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/347 (31%), Positives = 191/347 (55%), Gaps = 9/347 (2%)
Query: 25 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 84
+G SP++VT+ LI G + +L+ L + E + PDV+ +N L+H LF+ G PD+
Sbjct: 56 SGCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQ 115
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG--FVPELVTYNIL 142
A ++F++M + P T+N +++GLCK+ + A + + + G P++VTYN L
Sbjct: 116 AVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTL 175
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
I +A R+R A +++ +G P+ +T ++ ++ + LEIL MK G
Sbjct: 176 INAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGP 235
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
D Y ++I A G++ EA + ++ M D+V++NTL++ +CK G L A
Sbjct: 236 VPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALE 292
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
+L+EM ++ D T+TIL++GLC+ G ++ A LE + + G+ ++ AY +VD L
Sbjct: 293 VLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLC 352
Query: 323 KDGKIDHAINVFESMEVKDSFT----YSSMVHNLCKAKRLPSASKLL 365
K G+I+ A + + M V+ T YSS+V C+A + A ++L
Sbjct: 353 KSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREIL 399
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 209/399 (52%), Gaps = 7/399 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+A+ + +M+ AGI+PDV+T N L++G ++ + +L++LD M G
Sbjct: 175 LINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAG 234
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV +YNS++H L GK EA + + M C +P TFN +L+G CK AL
Sbjct: 235 PVPDVITYNSIIHALCVAGKVVEAAEILKTMSC---SPDLVTFNTLLDGFCKAGMLPRAL 291
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + +P+++TY IL+ GLC+ G+++ A ++L+E+ G+ P+ I YT+++
Sbjct: 292 EVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGL 351
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + + +++ M +G Y ++++ + + G + +A + + +MV+ + +
Sbjct: 352 CKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPL 411
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN ++ K+G + A L+ ++ +G+ D T+ LIDGLCKA ++ A +
Sbjct: 412 FTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADE 471
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G N +V L + G++D A ++ M K + Y+S++ LCK+ R
Sbjct: 472 MASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDR 531
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ A +L + GV + A + ++ + H G EA
Sbjct: 532 MDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEA 570
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 196/405 (48%), Gaps = 44/405 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG-------------------- 40
+LI C+ L + E ++PDV +N LI G
Sbjct: 67 ILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESS 126
Query: 41 ------ATRNSLLSC---------SLDLLDEMLEMG--IPPDVWSYNSLMHCLFQLGKPD 83
T N+++S + +LL+EM+ G PD+ +YN+L++ ++ +
Sbjct: 127 RVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIR 186
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
EA + M + P T NI+++G+CK+ + AL + G++ G VP+++TYN +I
Sbjct: 187 EACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSII 246
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
LC AG++ A ILK + S P+ +T+ T++ + LE+L M R+
Sbjct: 247 HALCVAGKVVEAAEILKTMSCS---PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENIL 303
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y ++ ++G+++ A +E++V G D+++Y +L++ CK G++E A+ L
Sbjct: 304 PDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKL 363
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
+ EM +G ++ L+ G C+AGN+ AR L M I L YN ++ L K
Sbjct: 364 VKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIK 423
Query: 324 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 364
DG I A+++ + V D TY++++ LCKA R+ A L
Sbjct: 424 DGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDL 468
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 168/345 (48%), Gaps = 9/345 (2%)
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G DV SYN L+ L + G +V++D++ +P TF I++ G CK A
Sbjct: 22 GYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRA 81
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L R L + P++ +N+LI GL K G A + + + S P +TY T++
Sbjct: 82 LEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISG 141
Query: 181 CFRNRKYKLGLEILSAMKRKG--YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
++ + E+L M RKG D Y T+I AF + R++EA + E+M G+
Sbjct: 142 LCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGIN 201
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D+++ N L++ CK+G +E A +LD M+ G D T+ +I LC AG + A
Sbjct: 202 PDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAA-- 259
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCK 354
E + + +L +N ++D K G + A+ V E M + D TY+ +V+ LC+
Sbjct: 260 -EILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCR 318
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
++ A LL ++ G A ++VDGL SG EA K+
Sbjct: 319 VGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKL 363
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 142/316 (44%), Gaps = 35/316 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D +C+ +L M I PDV+TY L+ G R + + LL+E++ G
Sbjct: 277 LLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQG 336
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANR---------------------------------- 87
PDV +Y SL+ L + G+ +EA++
Sbjct: 337 YIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAR 396
Query: 88 -VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ +M+ ++ P T+NI+L GL K+ A+ + L G+VP++VTYN LI GL
Sbjct: 397 EILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGL 456
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CKA R+R A + E+ G PN +T +++ R + ++ M RK + +
Sbjct: 457 CKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNV 516
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y ++I K R+ +A ++ M GV LD +Y LI G++ A + DE
Sbjct: 517 VVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDE 576
Query: 267 MEKQGFECDKYTHTIL 282
M +GF D T L
Sbjct: 577 MVARGFLPDGSTSKTL 592
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 133/250 (53%), Gaps = 10/250 (4%)
Query: 128 QKHGFVPELVTYNILIKGLCKAGR-LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
++ G+ ++ +YN L+ L K+G RT + + K+L SG +PN +T+ +++ + +
Sbjct: 19 EQDGYKHDVHSYNHLLDILVKSGHHFRTGK-VYKDLLHSGCSPNLVTFKILIRGNCKAGQ 77
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
LE L A+ D + + +I K G +A E M + V+ +IV+YNT
Sbjct: 78 AMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNT 137
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
+I+ CK G LE A LL+EM ++G + D T+ LI+ +A I+ A E M
Sbjct: 138 VISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKA 197
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPS 360
G + ++ N +V + KDG ++ A+ + + M+ V D TY+S++H LC A ++
Sbjct: 198 AGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVE 257
Query: 361 ASKLL--LSC 368
A+++L +SC
Sbjct: 258 AAEILKTMSC 267
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 84/178 (47%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
S ++++ + G PDVVTYN+LI G + + + + DL DEM G P+ +
Sbjct: 426 SISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLG 485
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
S++ L ++G+ D+A + +M P + +++GLCK+ D+A + ++
Sbjct: 486 SVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQ 545
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
G + Y LI + GR+ A + E+ G P+ T T+ + N ++
Sbjct: 546 GVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNSVFE 603
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 7/231 (3%)
Query: 183 RNRKYKLGLEILS-AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ + L ++ A ++ GY D Y ++ VK G + ++ G ++
Sbjct: 3 RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNL 62
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++ LI CK G+ A L +++ D Y +LI GL K GN A E
Sbjct: 63 VTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFEN 122
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM------EVKDSFTYSSMVHNLCKA 355
M + YN ++ L K G ++ A + E M D TY+++++ +A
Sbjct: 123 MESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRA 182
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
R+ A +G+ +V G+ G EA +I +++A
Sbjct: 183 SRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLA 233
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 174/336 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C + + N + GI PD+V YNSL+ G L+ +L +++EM E G
Sbjct: 331 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 390
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ +YN +++ L ++G +A V D I P TFN +++G CK D+AL
Sbjct: 391 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSAL 450
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + ++G P+ +TYN ++ GLCKAG++ +E+ G PN ITY +++
Sbjct: 451 QLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF 510
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ K + +++ M ++G D + T+I F + G L+ A +++ G
Sbjct: 511 CRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATA 570
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++NTLI + + + A + DEM +G D YT+ +LIDG CK N+ A +HL
Sbjct: 571 DTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVE 630
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M K GF ++ + +++ L + ++ A+ + M
Sbjct: 631 MIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIM 666
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 181/375 (48%), Gaps = 4/375 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ L RM G PD TYN++I G + S++ + +LL + + G
Sbjct: 261 LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG 320
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +Y SL++ L G + A +F + + P +N ++ GLC +AL
Sbjct: 321 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 380
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + + G P++ TYNI+I GLCK G + A ++ + G+ P+ T+ T++
Sbjct: 381 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 440
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K L+++ M G D Y +V+ K G++ E + ++M+ G +
Sbjct: 441 CKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNP 500
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN LI +C+ K+E A ++ +M ++G D + LI G C+ G+++GA L +
Sbjct: 501 ITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQK 560
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
+ + G+ + + +N ++ + A +F+ M K DS+TY ++ CK
Sbjct: 561 LEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTAN 620
Query: 358 LPSASKLLLSCLKSG 372
+ A L+ +K G
Sbjct: 621 VDRAYMHLVEMIKKG 635
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 205/437 (46%), Gaps = 36/437 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS-----------------LIAGATRN 44
++DA D + + RM AG+SPD+ T+ L A R
Sbjct: 91 IMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG 150
Query: 45 SLLSCSL--------------DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 90
++ C++ L D+ML + P++ ++N ++H L + G EA +
Sbjct: 151 AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLG 210
Query: 91 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 150
+I ++ T+NI + GLC+ A+R+ G++ + VP++VTYN LI+GLCK
Sbjct: 211 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKS 269
Query: 151 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
+ A L+ + + G P+ TY TI+ + + E+L KG+ D YC
Sbjct: 270 MPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYC 329
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
++I G ++ A + + G++ DIV YN+L+ C +G + A +++EM ++
Sbjct: 330 SLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 389
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
G D T+ I+I+GLCK GNI A + + G+ ++ +N ++D K K+D A
Sbjct: 390 GCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSA 449
Query: 331 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+ + E M D+ TY+S+++ LCKA ++ ++ + G +++
Sbjct: 450 LQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIEN 509
Query: 387 LRHSGCRREAKKIQSKI 403
S EA K+ K+
Sbjct: 510 FCRSNKMEEASKVIVKM 526
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 188/382 (49%), Gaps = 14/382 (3%)
Query: 5 AYCQFVS--FDAGYT-----ILNRMREAGISPDVVTYNSLI-AGATRNSLLSCSLDLLDE 56
AYC V + G+T + ++M + P++ +N ++ A R +L L LL +
Sbjct: 153 AYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGL-LLGK 211
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
+++ G+ ++++YN + L + G+ EA R+ D + P T+N ++ GLCK
Sbjct: 212 VIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLV-DGMRAYAVPDVVTYNTLIRGLCKKSM 270
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
A+ R + G +P+ TYN +I G CK ++ A +LK+ G P+ +TY +
Sbjct: 271 PQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCS 330
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ + LE+ + + KG D Y +++ G + A M +M +G
Sbjct: 331 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 390
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
DI +YN +IN CK G + A +++++ +G+ D +T LIDG CK + A
Sbjct: 391 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSAL 450
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
+E M + G + YN +++ L K GK++ F+ M +K + TY+ ++ N
Sbjct: 451 QLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF 510
Query: 353 CKAKRLPSASKLLLSCLKSGVR 374
C++ ++ ASK+++ + G+
Sbjct: 511 CRSNKMEEASKVIVKMSQEGLH 532
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 183/448 (40%), Gaps = 72/448 (16%)
Query: 20 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 79
+R+ A I P Y + I R L ++D + M PP +YN++M L
Sbjct: 42 SRLSPATIHP---LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDA 98
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV------ 133
D+A++V+ M+ ++P T I L C ALR+ R L G V
Sbjct: 99 AYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVV 158
Query: 134 -------------------------PELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
P L +N ++ LCK G + A +L ++ G +
Sbjct: 159 CGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMS 218
Query: 169 ----------------------------------PNAITYTTIMKCCFRNRKYKLGLEIL 194
P+ +TY T+++ + + + L
Sbjct: 219 INLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYL 278
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
M +G D F Y T+I + KI ++EAT+ ++ V G D V+Y +LIN C E
Sbjct: 279 RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAE 338
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
G +E A L +E + +G + D + L+ GLC G I A + M + G +++ Y
Sbjct: 339 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTY 398
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
N +++ L K G I A V +K D FT+++++ CK +L SA +L+ +
Sbjct: 399 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 458
Query: 371 SGVRILKSAQKAVVDGLRHSGCRREAKK 398
G+ +V++GL +G E +
Sbjct: 459 YGIAPDTITYNSVLNGLCKAGKVNEVNE 486
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 144/304 (47%), Gaps = 12/304 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ + ++N G PDV T+N+LI G + L +L L++ M E
Sbjct: 400 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 459
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD +YNS+++ L + GK +E N FQ+MI P T+NI++ C++ + A
Sbjct: 460 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 519
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + + G P+ V++N LI G C+ G L A + ++L + G++ A T+ T++
Sbjct: 520 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGA 579
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ +I M KG+ D + Y +I K + A ++ +M+ G
Sbjct: 580 FSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPS 639
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG---------FECDK---YTHTILIDGLCK 288
+ ++ +IN ++ A ++ M K G DK IL++ L K
Sbjct: 640 MSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVDTILNADKKEIAAPKILVEDLMK 699
Query: 289 AGNI 292
G+I
Sbjct: 700 KGHI 703
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 206/443 (46%), Gaps = 39/443 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ +L +M + G P +VT +SL+ G +S ++ L+D+M+EM
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN------ 114
G PD ++ +L+H LF K EA + M+ P T+ +++NGLCK
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 115 -----------------------------RYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
R+ D+AL +F ++ G P ++TY+ LI
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LC R A +L ++ + PN +T+ ++ + K ++ M ++ D
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
F Y ++I F RL EA E M++ ++V+YNTLIN +CK +++ L
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM ++G + T+T LI G +A + A++ + M G N+ YN ++D L K+G
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Query: 326 KIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
K++ A+ VFE ++ +TY+ M+ +CKA ++ L S GV+
Sbjct: 485 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYN 544
Query: 382 AVVDGLRHSGCRREAKKIQSKIR 404
++ G G + EA + K+R
Sbjct: 545 TMISGFCRKGLKEEADALFRKMR 567
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 202/411 (49%), Gaps = 4/411 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + FD ++ +M+ GIS ++ TYN LI R S +S +L LL +M+++G
Sbjct: 91 LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 150
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + + +SL++ + +A + M+ P T TF +++GL + A+
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P LVTY +++ GLCK G + A +L ++ + N + Y+T++
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R L + + M+ KG + Y ++I+ R +A+ + M+ + ++
Sbjct: 271 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNV 330
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++N LI+ + KEGKL A L DEM K+ + D +T++ LI+G C + A+ E
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 390
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M N+ YN +++ K +ID + +F M V ++ TY++++H +A+
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+A + + GV ++DGL +G +A + ++ +K+
Sbjct: 451 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 141/270 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + + +L+ M E I+P+VVT+N+LI + L + L DEM++
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+++Y+SL++ + DEA +F+ MI D P T+N ++NG CK + D +
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + + G V VTY LI G +A A+ + K++ G PN +TY T++
Sbjct: 421 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 480
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N K + + + ++R + Y +I K G++++ D + GV+ D+
Sbjct: 481 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDV 540
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+ YNT+I+ +C++G E A L +M + G
Sbjct: 541 IIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 147/324 (45%), Gaps = 39/324 (12%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K D+A +F M+ P FN +L+ + K + D + + +Q+ G L TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
ILI C+ ++ A +L ++ G+ P+ +T ++++ ++ + ++ M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
GY D + T+I + EA +++MV G Q ++V+Y ++N CK G ++ A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCK------AGNI------KGARLH---------- 298
+ LL++ME E + ++ +ID LCK A N+ KG R +
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 299 -------------LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 341
L M + + N+ +N ++D K+GK+ A +++ M + D
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 342 SFTYSSMVHNLCKAKRLPSASKLL 365
FTYSS+++ C RL A +
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMF 388
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 90/172 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C+ D G + M + G+ + VTY +LI G + + + +M+ G
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++ +YN+L+ L + GK ++A VF+ + + P T+NIM+ G+CK ++
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 525
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+F L G P+++ YN +I G C+ G A + +++ + G P++ T
Sbjct: 526 DLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 174/336 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C + + N + GI PD+V YNSL+ G L+ +L +++EM E G
Sbjct: 332 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 391
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ +YN +++ L ++G +A V D I P TFN +++G CK D+AL
Sbjct: 392 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSAL 451
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + ++G P+ +TYN ++ GLCKAG++ +E+ G PN ITY +++
Sbjct: 452 QLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF 511
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ K + +++ M ++G D + T+I F + G L+ A +++ G
Sbjct: 512 CRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATA 571
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++NTLI + + + A + DEM +G D YT+ +LIDG CK N+ A +HL
Sbjct: 572 DTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVE 631
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M K GF ++ + +++ L + ++ A+ + M
Sbjct: 632 MIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIM 667
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 181/375 (48%), Gaps = 4/375 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ L RM G PD TYN++I G + S++ + +LL + + G
Sbjct: 262 LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG 321
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +Y SL++ L G + A +F + + P +N ++ GLC +AL
Sbjct: 322 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 381
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + + G P++ TYNI+I GLCK G + A ++ + G+ P+ T+ T++
Sbjct: 382 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 441
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K L+++ M G D Y +V+ K G++ E + ++M+ G +
Sbjct: 442 CKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNP 501
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN LI +C+ K+E A ++ +M ++G D + LI G C+ G+++GA L +
Sbjct: 502 ITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQK 561
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
+ + G+ + + +N ++ + A +F+ M K DS+TY ++ CK
Sbjct: 562 LEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTAN 621
Query: 358 LPSASKLLLSCLKSG 372
+ A L+ +K G
Sbjct: 622 VDRAYMHLVEMIKKG 636
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 205/437 (46%), Gaps = 36/437 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS-----------------LIAGATRN 44
++DA D + + RM AG+SPD+ T+ L A R
Sbjct: 92 IMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG 151
Query: 45 SLLSCSL--------------DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 90
++ C++ L D+ML + P++ ++N ++H L + G EA +
Sbjct: 152 AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLG 211
Query: 91 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 150
+I ++ T+NI + GLC+ A+R+ G++ + VP++VTYN LI+GLCK
Sbjct: 212 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKS 270
Query: 151 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
+ A L+ + + G P+ TY TI+ + + E+L KG+ D YC
Sbjct: 271 MPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYC 330
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
++I G ++ A + + G++ DIV YN+L+ C +G + A +++EM ++
Sbjct: 331 SLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 390
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
G D T+ I+I+GLCK GNI A + + G+ ++ +N ++D K K+D A
Sbjct: 391 GCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSA 450
Query: 331 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+ + E M D+ TY+S+++ LCKA ++ ++ + G +++
Sbjct: 451 LQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIEN 510
Query: 387 LRHSGCRREAKKIQSKI 403
S EA K+ K+
Sbjct: 511 FCRSNKMEEASKVIVKM 527
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 188/382 (49%), Gaps = 14/382 (3%)
Query: 5 AYCQFVS--FDAGYT-----ILNRMREAGISPDVVTYNSLI-AGATRNSLLSCSLDLLDE 56
AYC V + G+T + ++M + P++ +N ++ A R +L L LL +
Sbjct: 154 AYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGL-LLGK 212
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
+++ G+ ++++YN + L + G+ EA R+ D + P T+N ++ GLCK
Sbjct: 213 VIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLV-DGMRAYAVPDVVTYNTLIRGLCKKSM 271
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
A+ R + G +P+ TYN +I G CK ++ A +LK+ G P+ +TY +
Sbjct: 272 PQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCS 331
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ + LE+ + + KG D Y +++ G + A M +M +G
Sbjct: 332 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 391
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
DI +YN +IN CK G + A +++++ +G+ D +T LIDG CK + A
Sbjct: 392 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSAL 451
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
+E M + G + YN +++ L K GK++ F+ M +K + TY+ ++ N
Sbjct: 452 QLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF 511
Query: 353 CKAKRLPSASKLLLSCLKSGVR 374
C++ ++ ASK+++ + G+
Sbjct: 512 CRSNKMEEASKVIVKMSQEGLH 533
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 183/448 (40%), Gaps = 72/448 (16%)
Query: 20 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 79
+R+ A I P Y + I R L ++D + M PP +YN++M L
Sbjct: 43 SRLSPATIHP---LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDA 99
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV------ 133
D+A++V+ M+ ++P T I L C ALR+ R L G V
Sbjct: 100 AYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVV 159
Query: 134 -------------------------PELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
P L +N ++ LCK G + A +L ++ G +
Sbjct: 160 CGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMS 219
Query: 169 ----------------------------------PNAITYTTIMKCCFRNRKYKLGLEIL 194
P+ +TY T+++ + + + L
Sbjct: 220 INLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYL 279
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
M +G D F Y T+I + KI ++EAT+ ++ V G D V+Y +LIN C E
Sbjct: 280 RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAE 339
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
G +E A L +E + +G + D + L+ GLC G I A + M + G +++ Y
Sbjct: 340 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTY 399
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
N +++ L K G I A V +K D FT+++++ CK +L SA +L+ +
Sbjct: 400 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 459
Query: 371 SGVRILKSAQKAVVDGLRHSGCRREAKK 398
G+ +V++GL +G E +
Sbjct: 460 YGIAPDTITYNSVLNGLCKAGKVNEVNE 487
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 144/304 (47%), Gaps = 12/304 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ + ++N G PDV T+N+LI G + L +L L++ M E
Sbjct: 401 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 460
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD +YNS+++ L + GK +E N FQ+MI P T+NI++ C++ + A
Sbjct: 461 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 520
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + + G P+ V++N LI G C+ G L A + ++L + G++ A T+ T++
Sbjct: 521 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGA 580
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ +I M KG+ D + Y +I K + A ++ +M+ G
Sbjct: 581 FSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPS 640
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG---------FECDK---YTHTILIDGLCK 288
+ ++ +IN ++ A ++ M K G DK IL++ L K
Sbjct: 641 MSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVDTILNADKKEIAAPKILVEDLMK 700
Query: 289 AGNI 292
G+I
Sbjct: 701 KGHI 704
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 190/361 (52%), Gaps = 4/361 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ M I +VVT++ +I G + + D++++M G P V +YN+++
Sbjct: 215 SVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGY 274
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ GK +A+ + ++M+ + P TFNI+++G C++ A ++F +Q+ G P +
Sbjct: 275 CKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNV 334
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
VTYN LI GLC G+L A + ++ G PN +TY ++ + + K E+L
Sbjct: 335 VTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDD 394
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
+ ++G + + T+I A+ K GR+ +A M+ GV ++ +YN LI +C+EG
Sbjct: 395 IGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGN 454
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
++ A L EME G + D T+ IL+D LCK G + A L+ M ++G + + YN
Sbjct: 455 VKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNA 514
Query: 317 IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++D ++G A+NV ME K + TY+ ++ C +L A++LL L+ G
Sbjct: 515 LIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKG 574
Query: 373 V 373
+
Sbjct: 575 L 575
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 159/327 (48%), Gaps = 2/327 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID YC+ +L M I P+ +T+N LI G R+ ++ + + +EM G
Sbjct: 270 IIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQG 329
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG-DLTPCTATFNIMLNGLCKNRYTDNA 120
+ P+V +YNSL++ L GK DEA QD + G L P T+N ++NG CK + A
Sbjct: 330 LQPNVVTYNSLINGLCSNGKLDEA-LGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEA 388
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
M + K G P ++T+N LI KAGR+ A + + D+G PN TY ++
Sbjct: 389 REMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVG 448
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R K ++ M+ G D Y ++ A K G ++A +++M G+
Sbjct: 449 FCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPS 508
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++YN LI+ Y +EG AA + MEK+G + T+ +LI G C G ++ A L
Sbjct: 509 HLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLN 568
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKI 327
M + G N Y+ + D + + G I
Sbjct: 569 EMLEKGLIPNRTTYDILRDEMMEKGFI 595
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 175/369 (47%), Gaps = 4/369 (1%)
Query: 37 LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 96
L+ +N + +L+ D + G S N ++ L + G+ V+++MI
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRR 224
Query: 97 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 156
+ TF++++NGLCK A + ++ GF P ++TYN +I G CKAG++ A
Sbjct: 225 IGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKAD 284
Query: 157 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 216
+LKE+ PN IT+ ++ R+ ++ M+R+G + Y ++I
Sbjct: 285 ALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGL 344
Query: 217 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
G+L EA ++M G++ ++V+YN LIN +CK+ L+ A +LD++ K+G +
Sbjct: 345 CSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNV 404
Query: 277 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
T LID KAG + A L M G N+ YNC++ ++G + A + +
Sbjct: 405 ITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKE 464
Query: 337 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 392
ME D TY+ +V LCK A +LL + G+ A++DG G
Sbjct: 465 MEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGN 524
Query: 393 RREAKKIQS 401
A +++
Sbjct: 525 STAALNVRT 533
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 150/299 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID +C+ + A + M+ G+ P+VVTYNSLI G N L +L L D+M M
Sbjct: 304 ILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGM 363
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V +YN+L++ + EA + D+ L P TFN +++ K D+A
Sbjct: 364 GLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDA 423
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P + TYN LI G C+ G ++ AR + KE+ +G + +TY ++
Sbjct: 424 FLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDA 483
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + + +L M G Y +I + + G A + M G + +
Sbjct: 484 LCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRAN 543
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
IV+YN LI +C +GKLE A LL+EM ++G ++ T+ IL D + + G I HL
Sbjct: 544 IVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHL 602
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 115/249 (46%), Gaps = 5/249 (2%)
Query: 159 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 218
L LG G A N+I ++ +N + L LE G+ ++ + VK
Sbjct: 148 LSVLGSWGCA-NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVK 206
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
GR+ ++M+ + +++V+++ +IN CK GK + A ++++M+ GF T
Sbjct: 207 EGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVIT 266
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+ +IDG CKAG + A L+ M N +N ++D +D + A VFE M+
Sbjct: 267 YNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQ 326
Query: 339 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
+ + TY+S+++ LC +L A L G++ A+++G +
Sbjct: 327 RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLK 386
Query: 395 EAKKIQSKI 403
EA+++ I
Sbjct: 387 EAREMLDDI 395
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 199/406 (49%), Gaps = 4/406 (0%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
++AYC+ FD +L MRE G + VTYN LIAG R+ + + +M + G+
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
PD ++Y +L++ L + + +EA + +M C +L P + +++G + D A +
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 348
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
M + + G P +TY+ L++GLCK G++ A +LK++ H P+ ITY I++ F
Sbjct: 349 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 408
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
R+ K +LS M+ G + + + Y +I + G ++A+D +E+M T G++ +
Sbjct: 409 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 468
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
Y LI+ YC+EG + A + D+M K D Y + LI GL K G ++ + + M
Sbjct: 469 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 528
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRL 358
+ G N Y+ ++ K+G ++ A + + M + Y ++ + K+ +
Sbjct: 529 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 588
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
S S L GV + ++ L SG A ++ S I
Sbjct: 589 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIE 634
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 188/376 (50%), Gaps = 4/376 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ D +L +M PD +TYN +I G R+ + LL EM G
Sbjct: 368 LVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAG 427
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V++Y+ ++H L Q G+P++A+ + ++M L P + +++G C+ A
Sbjct: 428 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLAC 487
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + K +P+L YN LI GL K GR+ + ++ + G PN TY+ ++
Sbjct: 488 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 547
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N + +++ M G + Y ++ ++ K +++ + + M+ GV LD
Sbjct: 548 LKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDN 607
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
Y LI+ G +EAA+ +L +EK G D + ++ LI GLCK + + A L+
Sbjct: 608 RIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDE 667
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M+K G D N+ YN ++D L K G I +A NVF S+ K + TY+S++ CK
Sbjct: 668 MSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGD 727
Query: 358 LPSASKLLLSCLKSGV 373
+ +A L L +G+
Sbjct: 728 ISNAFYLYNEMLATGI 743
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 194/406 (47%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ + +L+ M A + P+VV Y +LI G R + ++ EM+ G
Sbjct: 298 LINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAG 357
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +Y++L+ L ++G+ D A+ + + M+ P T T+N+++ G ++ +A
Sbjct: 358 VQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAF 417
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ ++ G P + TY+I+I GLC++G A +L+E+ G PNA Y ++
Sbjct: 418 RLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGY 477
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R L EI M + D + Y ++I K+GR++E+T Y QM G+ +
Sbjct: 478 CREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNE 537
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y+ LI+ Y K G LE+A L+ M G + + + L++ K+ +I+ +
Sbjct: 538 FTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKS 597
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G + Y ++ L G ++ A V +E V D YSS++ LCK
Sbjct: 598 MLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTAD 657
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A +L K GV A++DGL SG A+ + + I
Sbjct: 658 REKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 703
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 188/403 (46%), Gaps = 5/403 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ + + S + +L+ M AGISP+V TY+ +I G ++ + DLL+EM
Sbjct: 402 LIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 461
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ + Y L+ + G A +F M ++ P +N ++ GL K + +
Sbjct: 462 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEES 521
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ F +Q+ G +P TY+ LI G K G L +A +++ + D+G PN + Y +++
Sbjct: 522 TKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLES 581
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F++ + +M +G D Y +I G ++ A + + +G D
Sbjct: 582 YFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPD 641
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ Y++LI+ CK E A+ +LDEM K+G + + + LIDGLCK+G+I AR
Sbjct: 642 VHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFN 701
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ G N Y ++D K G I +A ++ M D+F YS + A
Sbjct: 702 SILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAG 761
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L A L+ G + S +VDG G +E K+
Sbjct: 762 DLEQAMFLIEEMFLRGHASISSFNN-LVDGFCKRGKMQETLKL 803
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 156/343 (45%), Gaps = 5/343 (1%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
+M+E G+ P+ TY+ LI G +N L + L+ ML+ G+ P+ Y L+ F+
Sbjct: 527 QMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSD 586
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
++ + F+ M+ + + I+++ L + + A R+ G++K+G VP++ Y+
Sbjct: 587 DIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYS 646
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
LI GLCK A IL E+ G PN + Y ++ ++ + +++ K
Sbjct: 647 SLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK 706
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G + Y ++I K+G + A +M+ G+ D Y+ L G LE A
Sbjct: 707 GLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQA 766
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
L++EM +G + L+DG CK G ++ L + G N I+
Sbjct: 767 MFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISG 825
Query: 321 LGKDGKIDHAINVFESMEVKDSFT----YSSMVHNLCKAKRLP 359
L + GK+ +F ++ K S + +SS+ ++ ++P
Sbjct: 826 LSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP 868
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 162/390 (41%), Gaps = 54/390 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI Y + ++ ++ RM + G+ P+ V Y L+ ++ + ML+ G
Sbjct: 543 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 602
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D Y L+H L G + A RV + P ++ +++GLCK + A
Sbjct: 603 VMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAF 662
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K G P +V YN LI GLCK+G + AR + + G PN +TYT+++
Sbjct: 663 GILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGS 722
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + M G T D F Y + G L++A +E+M G I
Sbjct: 723 CKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASI 781
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK-------- 293
S+N L++ +CK GK++ LL + +G + T +I GL +AG +
Sbjct: 782 SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVE 841
Query: 294 --------GAR----LHLEYMN--KIGFD------------SNLE--------------- 312
AR L ++ +N KI D NL+
Sbjct: 842 LQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAP 901
Query: 313 ----AYNCIVDRLGKDGKIDHAINVFESME 338
+Y IVD L + GK+ A+N+ + M+
Sbjct: 902 MGCSSYLAIVDNLCRKGKLSEALNLLKEMD 931
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 152/316 (48%), Gaps = 23/316 (7%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
+ +A + +L+ + + G PDV Y+SLI+G + + + +LDEM + G+ P++ YN
Sbjct: 622 NMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYN 681
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+L+ L + G A VF ++ L P T+ +++G CK NA ++ +
Sbjct: 682 ALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLAT 741
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G P+ Y++L G AG L A ++++E+ GHA + ++ ++ + K +
Sbjct: 742 GITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQET 800
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA-TDYME------------------Q 231
L++L + +G + +I+ + G+L E T ++E
Sbjct: 801 LKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMD 860
Query: 232 MVTDG-VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
M+ G + LD+V + +I +CKEG L+ A +L D + + ++ ++D LC+ G
Sbjct: 861 MINQGKIPLDVV--DDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKG 918
Query: 291 NIKGARLHLEYMNKIG 306
+ A L+ M+K G
Sbjct: 919 KLSEALNLLKEMDKRG 934
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 18/270 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ + N + G+ P+ VTY SLI G+ + +S + L +EML G
Sbjct: 683 LIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATG 742
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD + Y+ L G ++A + ++M ++FN +++G CK L
Sbjct: 743 ITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETL 801
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + G VP +T +I GL +AG+L I EL A ++++
Sbjct: 802 KLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDM 861
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K+ L+++ M R +C K G L +A + +V +
Sbjct: 862 I--NQGKIPLDVVDDMIRD--------HC-------KEGNLDKALMLRDVIVAKSAPMGC 904
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
SY +++ C++GKL A LL EM+K+G
Sbjct: 905 SSYLAIVDNLCRKGKLSEALNLLKEMDKRG 934
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 4/205 (1%)
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
+ + + A+ K+ A + +M G L+ V+YN LI C+ G +E A+ +ME
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
G D +T+ LI+GLCK+ A+ L+ M+ N+ Y ++D ++G D
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344
Query: 329 HAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 384
A + + M + TY ++V LCK ++ AS LL ++ R ++
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404
Query: 385 DGLRHSGCRREAKKIQSKIRMAKIS 409
+G +++A ++ S++ A IS
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGIS 429
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 82/219 (37%), Gaps = 54/219 (24%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ + + N M GI+PD Y+ L G + L ++ L++EM G
Sbjct: 718 LIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 777
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC--------- 112
+ S+N+L+ + GK E ++ ++ L P T +++GL
Sbjct: 778 -HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVH 836
Query: 113 ------KNRYTDNALRMFRGL----QKHGFVPELV------------------------- 137
+ + +++A R F L G +P V
Sbjct: 837 TIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIV 896
Query: 138 ---------TYNILIKGLCKAGRLRTARWILKELGDSGH 167
+Y ++ LC+ G+L A +LKE+ G+
Sbjct: 897 AKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGN 935
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 193/401 (48%), Gaps = 40/401 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ D +L +M++A +PD +TYN LI G ++ + + DEMLE G
Sbjct: 167 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAG 226
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVF-QDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV++YN L+ + G D A+ Q+ T T+ +++ L KN+ + A
Sbjct: 227 CKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEA 286
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + +G P + TYN L+ GLCK GRL A +L+++ D+G P+ +TYT+++
Sbjct: 287 VALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG 346
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ ++ M +G D Y +I ++ G++ +A+ + M + G D
Sbjct: 347 LGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPD 406
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF--------------------EC------ 274
+V+ +T+I+ K G++ AA + ME +G +C
Sbjct: 407 VVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLA 466
Query: 275 ---------DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
D T+ ILIDGLCK+G+++ AR + M + G ++ YN ++ K G
Sbjct: 467 QMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAG 526
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 362
D A VF+ M + TY +++ LCK ++L AS
Sbjct: 527 NTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKAS 567
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 193/380 (50%), Gaps = 5/380 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ M G PDVVT +++I G ++ + ++ + M G+ P+ Y++L+H L
Sbjct: 112 SVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 171
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ K D A + M TP T T+N++++GLCK+ + A F + + G P++
Sbjct: 172 CKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDV 231
Query: 137 VTYNILIKGLCKAGRLRTARWIL-KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
TYNILI G CKAG A L +E +G + TYT I+ +N+K + + ++
Sbjct: 232 YTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALME 291
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
+ G T Y ++ K+GRL+EA D + ++V +G D+V+Y +LI+ KE
Sbjct: 292 KITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEK 351
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
+ AY L EM +G D +T LI L + G I A + M G ++ +
Sbjct: 352 RSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLS 411
Query: 316 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++D L K G+I A+ +F+SME + + YS+++H LCKA+++ A ++L K+
Sbjct: 412 TMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA 471
Query: 372 GVRILKSAQKAVVDGLRHSG 391
++DGL SG
Sbjct: 472 FCTPDTITYNILIDGLCKSG 491
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 197/393 (50%), Gaps = 5/393 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
+ ++ ++ G +P + TYN+L+ G + L ++DLL ++++ G PDV +Y S
Sbjct: 2 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
L+ L + + EA ++F++M L T + ++ L + A +++ + HG
Sbjct: 62 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP++VT + +I GL KAGR+ A I K + G APN + Y+ ++ + RK L
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
E+L+ MK+ T D Y +I K G ++ A + ++M+ G + D+ +YN LI+ +
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241
Query: 252 CKEGKLEAA-YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
CK G +AA + L E G D +T+T ++D L K I+ A +E + G
Sbjct: 242 CKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPT 301
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLL 366
+ YN +++ L K G+++ AI++ + D TY+S++ L K KR A KL
Sbjct: 302 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 361
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
G+ + A++ L +G +A +
Sbjct: 362 EMALRGLALDTVCYTALIRELLQTGKIPQASSV 394
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 159/305 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D + + ++ ++ G +P + TYN+L+ G + L ++DLL ++++ G
Sbjct: 273 IVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 332
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV +Y SL+ L + + EA ++F++M L T + ++ L + A
Sbjct: 333 CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQAS 392
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + HG VP++VT + +I GL KAGR+ A I K + G APN + Y+ ++
Sbjct: 393 SVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 452
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ RK LE+L+ MK+ T D Y +I K G ++ A + ++M+ G + D+
Sbjct: 453 CKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDV 512
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN LI+ +CK G +AA + D+M + T+ LI GLCK + A L+ ++
Sbjct: 513 YTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQH 572
Query: 302 MNKIG 306
M + G
Sbjct: 573 MKERG 577
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 174/374 (46%), Gaps = 36/374 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG--------------ATRNSL 46
+LID C+ +A + M EAG PDV TYN LI+G A ++
Sbjct: 201 VLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTI 260
Query: 47 LSCSLD----------------------LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 84
C++D L++++ G P + +YN+L++ L ++G+ +E
Sbjct: 261 NGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEE 320
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
A + + ++ TP T+ +++GL K + + A ++F+ + G + V Y LI+
Sbjct: 321 AIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIR 380
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
L + G++ A + K + G P+ +T +T++ + + + I +M+ +G
Sbjct: 381 ELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAP 440
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ Y +I K ++ A + + QM D ++YN LI+ CK G +EAA
Sbjct: 441 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFF 500
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
DEM + G + D YT+ ILI G CKAGN A + M+ +N+ Y ++ L K
Sbjct: 501 DEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKR 560
Query: 325 GKIDHAINVFESME 338
++ A F+ M+
Sbjct: 561 RQLTKASLYFQHMK 574
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 155/359 (43%), Gaps = 40/359 (11%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K +EA + + + TP AT+N +LNGLCK + A+ + R + +G P++VTY
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
LI GL K R A + KE+ G A + + YT +++ + K + M
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV----------------------- 237
G D T+I K GR+ A + M G+
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180
Query: 238 ------------QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
D ++YN LI+ CK G +EAA DEM + G + D YT+ ILI G
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240
Query: 286 LCKAGNIKGARLHLEYMNKI-GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF- 343
CKAGN A L I G ++ Y IVD L K+ KI+ A+ + E +
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTP 300
Query: 344 ---TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
TY+++++ LCK RL A LL + +G +++DGL EA K+
Sbjct: 301 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 359
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 193/398 (48%), Gaps = 3/398 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C +L +M +G+ P+VV Y++LI G + + LLD M G
Sbjct: 355 MINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSG 414
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD++ YN+++ CL + GK +EA+ ++ L P TF + G K A
Sbjct: 415 VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAA 474
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ F + HG +P Y +LI G KAG L A I + L G P+ T + +
Sbjct: 475 KYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGL 534
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N + + L++ S +K KG D F Y ++I+ F K G +++A + ++M G+ +I
Sbjct: 535 LKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 594
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
YN L++ CK G ++ A L D M ++G E D T++ +IDG CK+ N+ A
Sbjct: 595 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 654
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---DSFTYSSMVHNLCKAKRL 358
M G + YN +V K+G ++ A+N+F M K + ++++++ CK+ ++
Sbjct: 655 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKI 714
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
AS+L + + V+D +G EA
Sbjct: 715 QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEA 752
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 195/386 (50%), Gaps = 6/386 (1%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
M++ G+ PD ++LI G R + L + D M+ GIP ++ +YN L+H L +
Sbjct: 232 FEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCK 291
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
GK ++A + + MI P + TF +++ G C+ AL + ++K VP V+
Sbjct: 292 FGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVS 351
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
Y +I GLC L A +L+++ SG PN + Y+T++ + + +L M
Sbjct: 352 YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMS 411
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
G D F Y +I+ K G+++EA+ Y+ ++ G++ D V++ I Y K GK+
Sbjct: 412 CSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT 471
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A DEM G + +T+LI+G KAGN+ A +++ +G +++ + +
Sbjct: 472 EAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFI 531
Query: 319 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS-CLKSGV 373
L K+G++ A+ VF ++ V D FTYSS++ CK + A +L CLK G+
Sbjct: 532 HGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLK-GI 590
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKI 399
A+VDGL SG + A+K+
Sbjct: 591 APNIFIYNALVDGLCKSGDIQRARKL 616
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 193/403 (47%), Gaps = 5/403 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ + +L+ M + + P V+Y ++I G LS + LL++M
Sbjct: 319 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 378
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V Y++L+ G+ +EA R+ M C + P +N +++ L K + A
Sbjct: 379 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 438
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+Q G P+ VT+ I G K G++ A E+ D G PN YT ++
Sbjct: 439 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 498
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+ L I + G D I +K GR++EA ++ G+ D
Sbjct: 499 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 558
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +Y++LI+ +CK+G++E A+ L DEM +G + + + L+DGLCK+G+I+ AR +
Sbjct: 559 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 618
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + G + + Y+ ++D K + A ++F M K SF Y+++VH CK
Sbjct: 619 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 678
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ A L L+ G S ++DG S +EA ++
Sbjct: 679 DMEKAMNLFREMLQKGFATTLSFN-TLIDGYCKSCKIQEASQL 720
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 198/408 (48%), Gaps = 5/408 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ + + + +I + G+ PDV T ++ I G +N + +L + E+ E
Sbjct: 494 VLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK 553
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+SL+ + G+ ++A + +M + P +N +++GLCK+ A
Sbjct: 554 GLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRA 613
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F G+ + G P+ VTY+ +I G CK+ + A + E+ G P++ Y ++
Sbjct: 614 RKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 673
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + + + + M +KG+ + T+I + K +++EA+ ++M+ + D
Sbjct: 674 CCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 732
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+Y T+I+ +CK GK+E A LL EM+++ D T+T L+ G K G E
Sbjct: 733 HVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFE 792
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS----MVHNLCKAK 356
M G + Y ++ K+ + A + + + K T + ++ LCK +
Sbjct: 793 KMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRE 852
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
L ASKLL + G++ +A +V +G EA ++ ++
Sbjct: 853 DLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVK 900
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 173/371 (46%), Gaps = 38/371 (10%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + ++E G+ PDV TY+SLI+G + + + +L DEM GI P+++ YN+L+ L
Sbjct: 546 VFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLC 605
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G A ++F M L P + T++ M++G CK+ A +F + G P
Sbjct: 606 KSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF 665
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHA----------------------------- 168
YN L+ G CK G + A + +E+ G A
Sbjct: 666 VYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMI 725
Query: 169 -----PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
P+ +TYTT++ + K + + M+ + D Y +++ + K+G+
Sbjct: 726 AKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSS 785
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
E E+MV GV+ D V+Y +I +CKE L A+ L DE+ +G H +LI
Sbjct: 786 EVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLI 845
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----V 339
LCK ++ A L+ M ++G +L A + +V + GK+D A VFE ++ V
Sbjct: 846 TALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLV 905
Query: 340 KDSFTYSSMVH 350
D+ T +V+
Sbjct: 906 PDTTTLIDLVN 916
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 149/330 (45%), Gaps = 36/330 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+ + + M E G+ PD VTY+++I G ++ ++ + L EM G
Sbjct: 600 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 659
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P + YN+L+H + G ++A +F++M+ T +FN +++G CK+ A
Sbjct: 660 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEAS 718
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F+ + +P+ VTY +I CKAG++ A + KE+ + + +TYT++M
Sbjct: 719 QLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGY 778
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK--------------IGR------ 221
+ + + M KG D Y VI A K +G+
Sbjct: 779 NKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKG 838
Query: 222 ---------------LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
L EA+ +++M G++ + + +TL+ + + GK++ A + +
Sbjct: 839 TIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEG 898
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
++ G D T L++G + + AR
Sbjct: 899 VKSLGLVPDTTTLIDLVNGNLNDTDSEDAR 928
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 65/127 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I A+C+ + + + + + G+ ++ LI + L+ + LLDEM E+
Sbjct: 808 LVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGEL 867
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P + + ++L+ + GK DEA RVF+ + L P T T ++NG + +++A
Sbjct: 868 GLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDA 927
Query: 121 LRMFRGL 127
+ + L
Sbjct: 928 RNLIKQL 934
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
+ + +M G+ PD VTY +I + L + L DE++ G+ ++ L+
Sbjct: 788 FALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITA 847
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
L + EA+++ +M L P A + ++ + D A R+F G++ G VP+
Sbjct: 848 LCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPD 907
Query: 136 LVTYNILIKGLCKAGRLRTARWILKEL 162
T L+ G AR ++K+L
Sbjct: 908 TTTLIDLVNGNLNDTDSEDARNLIKQL 934
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 196/380 (51%), Gaps = 4/380 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ A +L ++ ++ DVV YN +I ++ +S + L EM+
Sbjct: 170 LINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKR 229
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV ++NSL+ +G+ EA +F +M+ ++ P TF+I+++ LCK+ A
Sbjct: 230 ISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAK 289
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + K G +P++VTY+ L+ G C + A+ + + G AP+A +Y ++
Sbjct: 290 NMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGL 349
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + L + M KG D Y ++I K+GR+ A +++M +G+ DI
Sbjct: 350 GKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADI 409
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN+LI++ CK ++ A L+ +++ QG + YT+ ILIDGLCK G +K A+ +
Sbjct: 410 LTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQD 469
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G+ N YN +++ L K+G + A + ME + D+ TY +++ L +
Sbjct: 470 LLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDE 529
Query: 358 LPSASKLLLSCLKSGVRILK 377
A KLL + G+ + K
Sbjct: 530 NEKAEKLLREMIIRGLLLCK 549
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 201/439 (45%), Gaps = 41/439 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ YC ++I ++ + G P +T+N+LI G N L +L D ++ +
Sbjct: 99 ILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIAL 158
Query: 61 GIPPDVWSYNSLMHCLFQLGKP-----------------------------------DEA 85
G D SY +L++ L ++G+ +A
Sbjct: 159 GFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDA 218
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+++ +MI ++P TFN ++ G C A +F + P++ T++IL+
Sbjct: 219 YQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDA 278
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTF 204
LCK G + A+ +L + G P+ +TY+++M C N K + S M R G
Sbjct: 279 LCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNK-AKHVFSTMSRLGVAP 337
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
Y +I KI + EA ++M G+ D V+YN+LI+ CK G++ A+ L+
Sbjct: 338 HAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLV 397
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
DEM G D T+ LID LCK +I A ++ + G ++ YN ++D L K
Sbjct: 398 DEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKG 457
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
G++ +A +VF+ + +K +++TY+ M++ LCK A LL +G+
Sbjct: 458 GRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTY 517
Query: 381 KAVVDGLRHSGCRREAKKI 399
+ ++ L +A+K+
Sbjct: 518 ETIIRALFRKDENEKAEKL 536
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 182/361 (50%), Gaps = 6/361 (1%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATR--NSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
+RM +P +V +N ++ + N+ + ++ L ++ GI P + ++N L++C
Sbjct: 45 FHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCY 104
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
LG+ A +F ++ P T TFN ++NG+C N AL + GF +
Sbjct: 105 CHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQ 164
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
V+Y LI GLCK G R A +LK++ + + Y I+ +++ ++ S
Sbjct: 165 VSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSE 224
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M K + D + ++I F +G+LKEA +MV + D+ +++ L++ CK+G
Sbjct: 225 MITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGN 284
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+ A +L M KQG D T++ L+DG C + A+ M+++G + +YN
Sbjct: 285 ITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNI 344
Query: 317 IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
+++ LGK +D A+++F+ M K D+ TY+S++ LCK R+ A +L+ +G
Sbjct: 345 MINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNG 404
Query: 373 V 373
+
Sbjct: 405 I 405
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 141/272 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+DA C+ + +L M + G+ PDVVTY+SL+ G + ++ + + M +
Sbjct: 274 ILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRL 333
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P SYN +++ L ++ DEA +F++M C + P T T+N +++GLCK A
Sbjct: 334 GVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYA 393
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + +G +++TYN LI LCK + A ++K++ D G P+ TY ++
Sbjct: 394 WQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDG 453
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + K ++ + KGY+ + + Y +I K G EA + +M +G+ D
Sbjct: 454 LCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPD 513
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
V+Y T+I ++ + E A LL EM +G
Sbjct: 514 AVTYETIIRALFRKDENEKAEKLLREMIIRGL 545
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 198/406 (48%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C+ +A +LNRM+ G PD+VTYN +I L +L +LD++L
Sbjct: 153 VISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDN 212
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y L+ G +EA ++ ++M+ L P T+N ++ G+CK + A
Sbjct: 213 CMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAA 272
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L G P++++YNIL++ G+ ++ E+ G PN +TY+ ++
Sbjct: 273 ELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSL 332
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + + +L M K T D + Y +I+A K GRL A M+ M+++G DI
Sbjct: 333 CRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDI 392
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNT++ CK G A + +++ G + ++ +I L G+ A +
Sbjct: 393 VNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPA 452
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M G D + YN ++ L +DG ++ AI + + ME +Y+ ++ LCK +R
Sbjct: 453 MISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRR 512
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ A + ++ G R ++ +++G+ +G R EA ++ + +
Sbjct: 513 IDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSL 558
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 170/347 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+A + +L M G+ PD+ TYN++I G + ++ + +L+ +
Sbjct: 222 ILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSK 281
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV SYN L+ GK DE ++ +M P T++I+++ LC+ D A
Sbjct: 282 GCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEA 341
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + + + P+ +Y+ LI LCK GRL A I+ + +G P+ + Y TI+
Sbjct: 342 ISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAA 401
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+N LEI + ++ G + Y T+I+A G A + M++ G+ D
Sbjct: 402 LCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPD 461
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++YN+LI+ C++G +E A LLD+ME+ GF ++ I++ GLCK I A
Sbjct: 462 EITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFA 521
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS 347
M + G N Y +++ +G G A+ + S+ +D + S
Sbjct: 522 EMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDS 568
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 188/393 (47%), Gaps = 11/393 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + F + + ++ + E+ PDV YN++I+G + + + + +L+ M G
Sbjct: 119 LIKGFFNFKNIEKASRVM-EILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARG 177
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ +YN ++ L K A V ++ + P T+ I++ + A+
Sbjct: 178 FLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAM 237
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + G +P++ TYN +I+G+CK G + A ++ L G P+ I+Y +++
Sbjct: 238 KLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAF 297
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K+ G ++++ M +G + Y +I++ + GR+ EA ++ M+ + D
Sbjct: 298 LNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDT 357
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
SY+ LI+ CKEG+L+ A ++D M G D + ++ LCK GN A LE
Sbjct: 358 YSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQA---LEI 414
Query: 302 MNKI---GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
NK+ G N+ +YN ++ L G A+ + +M K D TY+S++ LC+
Sbjct: 415 FNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCR 474
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ A LL +SG R + V+ GL
Sbjct: 475 DGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGL 507
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 144/337 (42%), Gaps = 40/337 (11%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELV----------------------------- 137
+LN CK + +L L G+ P+++
Sbjct: 84 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 143
Query: 138 -----TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
YN +I G CK ++ A +L + G P+ +TY ++ RK L L
Sbjct: 144 EPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALT 203
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+L + Y +I A + G + EA +E+M+ G+ D+ +YN +I C
Sbjct: 204 VLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMC 263
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNL 311
KEG +E A L+ + +G E D ++ IL+ G +G +L E ++ G + N
Sbjct: 264 KEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR-GCEPNK 322
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLS 367
Y+ ++ L + G+ID AI+V + M K D+++Y ++ LCK RL A ++
Sbjct: 323 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 382
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ +G ++ L +G +A +I +K+R
Sbjct: 383 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLR 419
>gi|224137392|ref|XP_002322546.1| predicted protein [Populus trichocarpa]
gi|222867176|gb|EEF04307.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/267 (39%), Positives = 159/267 (59%), Gaps = 18/267 (6%)
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
NI I +CKA L+ A ++ + G P+ +TY T++ R ++ +L MK
Sbjct: 11 NICIASICKARHLKRAEIVIIDGTILGVLPDVVTYDTLINAYSRFVSFEAAYSVLDRMKE 70
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
D F ++IA ++ L + D E+M+ ++ D+ SYNTL+ + K GK
Sbjct: 71 ACINPDVFTCNSLIAGAMRHCLLSKCMDLFEEMLEWRIKADVWSYNTLMRCFFKLGKP-- 128
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
DEM + THT L++GLC+ G++ GA +EYMN +GF+SNL A N +VD
Sbjct: 129 -----DEMNR--------THTTLMNGLCEEGDVYGA---MEYMNVVGFNSNLVALNTMVD 172
Query: 320 RLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
K ID A+ +F+SM+ +DSF++SS++HNLCK R ASKLLLSC++SG+ IL S
Sbjct: 173 GWCKADWIDCALKIFDSMDTRDSFSHSSLIHNLCKDGRFRCASKLLLSCVRSGMSILPST 232
Query: 380 QKAVVDGLRHSGCRREAKKIQSKIRMA 406
+ AV D L SGC+REAK+++S+I++A
Sbjct: 233 KHAVFDSLSRSGCQREAKRLKSEIKLA 259
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 104/182 (57%), Gaps = 21/182 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+AY +FVSF+A Y++L+RM+EA I+PDV T NSLIAGA R+ LLS +DL +EMLE
Sbjct: 48 LINAYSRFVSFEAAYSVLDRMKEACINPDVFTCNSLIAGAMRHCLLSKCMDLFEEMLEWR 107
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG-----------------DLTPCTATF 104
I DVWSYN+LM C F+LGKPDE NR ++ G
Sbjct: 108 IKADVWSYNTLMRCFFKLGKPDEMNRTHTTLMNGLCEEGDVYGAMEYMNVVGFNSNLVAL 167
Query: 105 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 164
N M++G CK + D AL++F + + +++ LI LCK GR R A +L
Sbjct: 168 NTMVDGWCKADWIDCALKIFDSMDTR----DSFSHSSLIHNLCKDGRFRCASKLLLSCVR 223
Query: 165 SG 166
SG
Sbjct: 224 SG 225
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 194/379 (51%), Gaps = 6/379 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ FD +LN M E G SPDV +Y +LI +N +S +L L DEM E
Sbjct: 154 ILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPER 213
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG-DLTPCTATFNIMLNGLCKNRYTDN 119
G+ PDV YN L+ F+ G A+ +++ ++ G + P ++N+M+NGLCK D
Sbjct: 214 GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDE 273
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+ ++ ++K+ +L TY+ LI GLC +G L A + KE+ ++G +P+ + Y T++
Sbjct: 274 SFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLN 333
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
R + + LE+ M+++G Y +I + ++ EA E +
Sbjct: 334 GYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCA 392
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D ++Y L++ CK G L A +L+E E + D + ++ +I+GLC+ G + L
Sbjct: 393 DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVL 452
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKA 355
+ M K G N N +++ + K++ A+ F +M K F TY+++++ L KA
Sbjct: 453 DQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKA 512
Query: 356 KRLPSASKLLLSCLKSGVR 374
+R A L+ L G +
Sbjct: 513 ERFSEAYALVKEMLHKGWK 531
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 179/394 (45%), Gaps = 44/394 (11%)
Query: 36 SLIAGATRNSLLSCSLDLLDEMLEM-GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 94
++I +NS+ +LD+ M E+ G P + SYNSL++ L + K DEA F
Sbjct: 83 TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 142
Query: 95 GDLTPCTATFNI-----------------------------------MLNGLCKNRYTDN 119
L+P T+NI ++N L KN Y +
Sbjct: 143 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSD 202
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL--GDSGHAPNAITYTTI 177
AL++F + + G P++ YNILI G K G + A I + L G S + PN +Y +
Sbjct: 203 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVY-PNIPSYNVM 261
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + K+ EI MK+ D + Y T+I G L AT ++M +GV
Sbjct: 262 INGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGV 321
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
D+V YNT++N Y + G++E L MEK+G ++ ILI GL + + A
Sbjct: 322 SPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT-VVSYNILIRGLFENAKVDEAIS 380
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 353
E + + ++ Y +V L K+G ++ A+++ E E D+F YSSM++ LC
Sbjct: 381 IWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLC 440
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ RL + +L K G + AV++G
Sbjct: 441 REGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGF 474
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 192/413 (46%), Gaps = 43/413 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
+LID + + I R+ + + P++ +YN +I G + S ++ M +
Sbjct: 224 ILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKK 283
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
D+++Y++L+H L G D A RV+++M ++P +N MLNG + +
Sbjct: 284 NERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEE 343
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
L +++ ++K G +V+YNILI+GL + ++ A I + L + +++TY ++
Sbjct: 344 CLELWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVH 402
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT---------------------------- 211
+N L IL + D F Y +
Sbjct: 403 GLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKP 462
Query: 212 -------VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
VI FV+ +L++A + MV+ G +V+YNTLIN K + AY L+
Sbjct: 463 NPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALV 522
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
EM +G++ + T+++L++GLC+ + A L + + K GF +++ +N I+ L
Sbjct: 523 KEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK-GFKPDVKMHNIIIHGLCS 581
Query: 324 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
GK++ A+ ++ M+ V + T+++++ K + ASK+ L+ G
Sbjct: 582 SGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYG 634
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 136/295 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + D +I + E D +TY L+ G +N L+ +L +L+E
Sbjct: 364 ILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENG 423
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
D ++Y+S+++ L + G+ DE V M P N ++NG + ++A
Sbjct: 424 RGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDA 483
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
LR F + G P +VTYN LI GL KA R A ++KE+ G PN ITY+ +M
Sbjct: 484 LRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNG 543
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ +K + L + KG+ D + +I G++++A +M +
Sbjct: 544 LCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPN 603
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
+V++NTL+ + K E A + D + + G + D ++ I + GLC I A
Sbjct: 604 LVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDA 658
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 126/256 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ D +L++M + G P+ N++I G R S L +L M+ G
Sbjct: 435 MINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKG 494
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +YN+L++ L + + EA + ++M+ P T+++++NGLC+ + D AL
Sbjct: 495 CFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMAL 554
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + GF P++ +NI+I GLC +G++ A + E+ PN +T+ T+M+
Sbjct: 555 NLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGF 614
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ R ++ +I + + G D Y + R+ +A ++ V GV
Sbjct: 615 YKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTA 674
Query: 242 VSYNTLINLYCKEGKL 257
+++N L+ G L
Sbjct: 675 ITWNILVRAVLDNGAL 690
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 73/152 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ CQ D + + E G PDV +N +I G + + +L L EM +
Sbjct: 539 LLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQR 598
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P++ ++N+LM +++ + A++++ ++ P ++NI L GLC +A
Sbjct: 599 KCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDA 658
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
+ G +P +T+NIL++ + G L
Sbjct: 659 VGFLNDAVDRGVLPTAITWNILVRAVLDNGAL 690
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 199/392 (50%), Gaps = 6/392 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ FD +LN M E G SPDV +Y +LI +N +S +L L DEM E
Sbjct: 154 ILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPER 213
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG-DLTPCTATFNIMLNGLCKNRYTDN 119
G+ PDV YN L+ F+ G A+ +++ ++ G + P ++N+M+NGLCK D
Sbjct: 214 GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDE 273
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+ ++ ++K+ +L TY+ LI GLC +G L A + KE+ ++G +P+ + Y T++
Sbjct: 274 SFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLN 333
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
R + + LE+ M+++G Y +I + ++ EA E +
Sbjct: 334 GYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCA 392
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D ++Y L++ CK G L A +L+E E + D + ++ +I+GLC+ G + L
Sbjct: 393 DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVL 452
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKA 355
+ M K G N N +++ + K++ A+ F +M K F TY+++++ L KA
Sbjct: 453 DQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKA 512
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+R A L+ L G + +++GL
Sbjct: 513 ERFSEAYALVKEMLHKGWKPNMITYSLLMNGL 544
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 179/394 (45%), Gaps = 44/394 (11%)
Query: 36 SLIAGATRNSLLSCSLDLLDEMLEM-GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 94
++I +NS+ +LD+ M E+ G P + SYNSL++ L + K DEA F
Sbjct: 83 TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 142
Query: 95 GDLTPCTATFNI-----------------------------------MLNGLCKNRYTDN 119
L+P T+NI ++N L KN Y +
Sbjct: 143 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSD 202
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL--GDSGHAPNAITYTTI 177
AL++F + + G P++ YNILI G K G + A I + L G S + PN +Y +
Sbjct: 203 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVY-PNIPSYNVM 261
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + K+ EI MK+ D + Y T+I G L AT ++M +GV
Sbjct: 262 INGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGV 321
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
D+V YNT++N Y + G++E L MEK+G ++ ILI GL + + A
Sbjct: 322 SPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAIS 380
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 353
E + + ++ Y +V L K+G ++ A+++ E E D+F YSSM++ LC
Sbjct: 381 IWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLC 440
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ RL + +L K G + AV++G
Sbjct: 441 REGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGF 474
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 192/412 (46%), Gaps = 43/412 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
+LID + + I R+ + + P++ +YN +I G + S ++ M +
Sbjct: 224 ILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKK 283
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
D+++Y++L+H L G D A RV+++M ++P +N MLNG + +
Sbjct: 284 NERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEE 343
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
L +++ ++K G +V+YNILI+GL + ++ A I + L + +++TY ++
Sbjct: 344 CLELWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVH 402
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT---------------------------- 211
+N L IL + D F Y +
Sbjct: 403 GLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKP 462
Query: 212 -------VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
VI FV+ +L++A + MV+ G +V+YNTLIN K + AY L+
Sbjct: 463 NPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALV 522
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
EM +G++ + T+++L++GLC+ + A L + + K GF +++ +N I+ L
Sbjct: 523 KEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK-GFKPDVKMHNIIIHGLCS 581
Query: 324 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
GK++ A+ ++ M+ V + T+++++ K + ASK+ L+S
Sbjct: 582 SGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQS 633
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ + + + M G P VVTYN+LI G ++ S + L+ EML G
Sbjct: 470 VINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKG 529
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P++ +Y+ LM+ L Q K D A ++ + P NI+++GLC + ++AL
Sbjct: 530 WKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDAL 589
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
+++ +++ VP LVT+N L++G K A I + S + N
Sbjct: 590 QLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWSSSN 638
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 190/358 (53%), Gaps = 1/358 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ + + + G+ P VV++N+LI+G R+ + L M
Sbjct: 231 ILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESE 290
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PDV++Y++L++ L + + +EAN +F +M L P TF +++G CK+ D A
Sbjct: 291 RISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLA 350
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
LR F ++ G P+L+TYN LI GLC+ G L+ AR +L E+ +G P+ IT+TT+M
Sbjct: 351 LRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDG 410
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C ++ LEI M +G D + +I+ + GR+++A ++ M++ G + D
Sbjct: 411 CCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPD 470
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y +I+ +CK+G ++ LL EM++ G T+ L++G CK G +K A++ L
Sbjct: 471 DPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLH 530
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDG-KIDHAINVFESMEVKDSFTYSSMVHNLCKAKR 357
M + N +N ++D K G +D I E V D +Y+++V+ K +
Sbjct: 531 AMLNMEVVPNDITFNILLDGHCKHGSSVDFKIFNGEKGLVSDYASYTALVNESIKISK 588
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 165/322 (51%), Gaps = 4/322 (1%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
E+L+ G PP+V+ +N LMH ++G A VF ++ L P +FN +++G C+++
Sbjct: 216 EVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSK 275
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
+ + ++ P++ TY+ LI GLCK R+ A + E+ + G PN +T+T
Sbjct: 276 NVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFT 335
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T++ ++ K L L MK +G D Y +I + G LKEA + +M+ +
Sbjct: 336 TLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGN 395
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G + D +++ TL++ CK+G +++A + D M ++G E D T LI GLC+ G ++ A
Sbjct: 396 GFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDA 455
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 351
L+ M G + Y ++D K G + + + M+ V TY+++++
Sbjct: 456 ERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNG 515
Query: 352 LCKAKRLPSASKLLLSCLKSGV 373
CK ++ +A LL + L V
Sbjct: 516 FCKQGQMKNAKMLLHAMLNMEV 537
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 147/294 (50%), Gaps = 8/294 (2%)
Query: 114 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
N+ + + + +G+ P + +NIL+ G CK G + AR + E+ G P+ ++
Sbjct: 204 NQQPGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVS 263
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
+ T++ R++ + G + S M+ + + D F Y +I K R++EA ++M
Sbjct: 264 FNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMC 323
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
G+ + V++ TLI+ CK GK++ A + M+ +G D T+ LI+GLC+ G++K
Sbjct: 324 EMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLK 383
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 349
AR L M GF + + ++D KDG +D A+ + + M + D +++++
Sbjct: 384 EARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALI 443
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
LC+ R+ A ++L L +G + V+D C++ K+ +K+
Sbjct: 444 SGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCF----CKKGDVKMGAKL 493
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 192/377 (50%), Gaps = 7/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C+ + +L RM+E G PD YN+LI+G ++ + L EM++
Sbjct: 15 ILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKN 74
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P V +Y +++ L + G+ +A ++ +M +P T+N+++ GLC+ R D A
Sbjct: 75 HCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEA 134
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+M + G+ P++VTYN IKGLCK R+ AR L + + P+ ++YTT++
Sbjct: 135 KKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT---PDVVSYTTVING 191
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ +L M +G T D Y ++I F K G ++ A ++ M+ G + +
Sbjct: 192 LCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPN 251
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YN+L+ + G + A +L EME++GF D ++ IDGLCKA +K A+ +
Sbjct: 252 MVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFD 311
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
M + G N +Y+ +V+ L K ++D AI + E ++ D Y+ ++ LCK
Sbjct: 312 RMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGG 371
Query: 357 RLPSASKLLLSCLKSGV 373
R A L L +
Sbjct: 372 RFDEACALFSKVLDEKI 388
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 190/375 (50%), Gaps = 7/375 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D C+ +L+ MR+ G SP++ TYN ++ G L + +L+EM G
Sbjct: 86 IVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRG 145
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV +YNS + L + + DEA + M +TP ++ ++NGLCK+ D+A
Sbjct: 146 YFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSAS 202
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
RM + G P++VTY+ LI G CK G + A +L + G PN + Y +++
Sbjct: 203 RMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGAL 262
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R ++L M+R+G+T D Y I K R+K+A ++MV G +
Sbjct: 263 HRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNA 322
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLE 300
SY+ L+ CK+ +L+ A L+++ ++ D +T+L+DGLCK G A L +
Sbjct: 323 SSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSK 382
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS---FTYSSMVHNLCKAKR 357
+++ + ++ YN ++D K +ID A+ + + M ++ T++ +VH LC R
Sbjct: 383 VLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVVTWNILVHGLCVDDR 442
Query: 358 LPSASKLLLSCLKSG 372
L A +LL+ + G
Sbjct: 443 LSDAETMLLTMVDEG 457
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 194/391 (49%), Gaps = 7/391 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M + PD T+ L+ G R++ L + LL M EMG PD YN+L+ +
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
+A + +M+ P T+ +++GLCK T +A+++ ++ G P + TYN+
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
+++GLC+ +L A+ +L+E+ G+ P+ +TY + +K + + + L+ M
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP--- 177
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
T D Y TVI K G L A+ ++QM G D+V+Y++LI+ +CK G++E A
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
LLD M K G + + L+ L + G+I A L M + GF ++ +YN +D L
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
K ++ A VF+ M + ++ +YS +V LCK K L A L+ + +
Sbjct: 298 CKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDI 357
Query: 378 SAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
++DGL G EA + SK+ KI
Sbjct: 358 LLYTVLLDGLCKGGRFDEACALFSKVLDEKI 388
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 184/410 (44%), Gaps = 26/410 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ + +L+ M + G P++V YNSL+ R + + D+L EM G
Sbjct: 223 LIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRG 282
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV SYN+ + L + + +A VF M+ TP +++++++ LCK + D+A+
Sbjct: 283 FTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAI 342
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL-KELGDSGHAPNAITYTTIMKC 180
+ ++ + +++ Y +L+ GLCK GR A + K L + P+ Y ++
Sbjct: 343 TLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDS 402
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI------GRLKEATDYMEQMVT 234
+ R+ L+I M + C V+ + + RL +A + MV
Sbjct: 403 HCKRRQIDKALQIHKQMLERNC-------CNVVTWNILVHGLCVDDRLSDAETMLLTMVD 455
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
+G D V+Y TL++ CK GK AA L +E K G D T++ LI GL +
Sbjct: 456 EGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEE 515
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVH 350
A L + ++ +N ++ ++G D + +F ES ++ T+ +
Sbjct: 516 AYLLFTKL-------DVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEIS 568
Query: 351 -NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L KA+ L A L +K G ++D G EA++I
Sbjct: 569 GKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRI 618
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 146/341 (42%), Gaps = 47/341 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
ML++ C+ D T++ + RE D++ Y L+ G + + L ++L+
Sbjct: 327 MLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDE 386
Query: 61 GI-PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPC-TATFNIMLNGLCKNRYTD 118
I PDV+ YN ++ + + D+A ++ + M+ + C T+NI+++GLC +
Sbjct: 387 KICEPDVFFYNVMLDSHCKRRQIDKALQIHKQML--ERNCCNVVTWNILVHGLCVDDRLS 444
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
+A M + GF+P+ VTY L+ +CK G+ A + +E G P+ +TY+ ++
Sbjct: 445 DAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALI 504
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
GL + M + Y F K
Sbjct: 505 T----------GL-VHENMAEEAYLL-----------FTK-------------------- 522
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG-LCKAGNIKGARL 297
LD+ +N +I Y + G + L E+ + E + T I G L KA ++ AR
Sbjct: 523 LDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARG 582
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+ K GF +L N ++D K G ++ A +F SM+
Sbjct: 583 LFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMK 623
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 189/370 (51%), Gaps = 4/370 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M G P+VV+YN++I G + + + +LD M GI PD ++Y SL+ + + G+
Sbjct: 199 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 258
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
+EA+ +F M+ L P T+N +++G C + A + K G +P + TYN+
Sbjct: 259 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 318
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
L+ L GR+ A ++KE+ G P+AITY ++ R K ++ + M KG
Sbjct: 319 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKG 378
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
Y ++I + R+KEA D E+++ GV D++ +N +I+ +C G +E A+
Sbjct: 379 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAF 438
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+LL EM+++ D+ T L+ G C+ G ++ AR+ L+ M G + +YN ++
Sbjct: 439 MLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGY 498
Query: 322 GKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
G+ G I A V + M TY++++ LCK + A +LL + G+
Sbjct: 499 GRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDD 558
Query: 378 SAQKAVVDGL 387
S ++++G+
Sbjct: 559 STYLSLIEGM 568
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 180/355 (50%), Gaps = 4/355 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I Y + + IL+ MR GI PD TY SLI+G + L + L D+M+E+G
Sbjct: 214 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIG 273
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +YN+L+ G + A +M+ + P +T+N++++ L A
Sbjct: 274 LVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEAD 333
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + ++K G +P+ +TYNILI G + G + A + E+ G P +TYT+++
Sbjct: 334 DMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVL 393
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + K ++ + +G + D + +I G ++ A +++M V D
Sbjct: 394 SRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDE 453
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++NTL+ C+EGK+E A +LLDEM+ +G + D ++ LI G + G+IK A +
Sbjct: 454 VTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDE 513
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
M IGF+ L YN ++ L K+ + D A + + M K D TY S++ +
Sbjct: 514 MLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 568
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 4/226 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ Y + + + + N M GI P VTY SLI +R + + + DL +++L+
Sbjct: 353 ILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 412
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G+ PDV +N+++ HC G + A + ++M + P TFN ++ G C+ +
Sbjct: 413 GVSPDVIMFNAMIDGHC--ANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVE 470
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A + ++ G P+ ++YN LI G + G ++ A + E+ G P +TY ++
Sbjct: 471 EARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALI 530
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
KC +N++ L E+L M KG + D Y ++I + L E
Sbjct: 531 KCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 576
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 16/221 (7%)
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVT----------DGVQL--DIVSYNTLINLY 251
D YC + ++ K A ++Q++ D + L D +S + I
Sbjct: 124 LDTKSYCLAVVLLARLPSPKLALQLLKQVMETRIATNRELFDELTLSRDRLSVKSSIVFD 183
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
EGKL+ A + ME GF+ + ++ +I G GNI+GAR L+ M G + +
Sbjct: 184 LLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDS 243
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
Y ++ + K+G+++ A +F+ M V ++ TY++++ C L A
Sbjct: 244 YTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDE 303
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+K G+ S +V L G EA + ++R I
Sbjct: 304 MVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI 344
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 198/387 (51%), Gaps = 5/387 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M G++P+V TYN L+ L ++ ++ +M G P+ +YN+L+ + G+
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 82 PDEANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
D A RV M G+ P TFN M+NGLCK + A ++F + + G P++V+YN
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
L+ G CK G L + + E+ G P+ +T+T+++ + + + +++ M+ +
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G + + +I F K G L +A +E+M G+Q +V YN LIN YCK G+++ A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
L+ EME + + D T++ +I G CK GN+ A + M K G + Y+ ++
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300
Query: 321 LGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
L ++ +++ A +FE+M D FTY++++ CK + A L ++ GV
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 360
Query: 377 KSAQKAVVDGLRHSGCRREAKKIQSKI 403
+++GL S +EA ++ K+
Sbjct: 361 VVTYSVLINGLSKSARTKEAHRLLFKL 387
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 203/414 (49%), Gaps = 19/414 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ + + + M G++PDVV+YN+L++G + L SL + EM + G
Sbjct: 87 MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 146
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV ++ SL+H + G ++A + M L TF +++G CK + D+AL
Sbjct: 147 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 206
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++K G P +V YN LI G CK GR+ AR +++E+ P+ +TY+TI+
Sbjct: 207 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 266
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ M +KG D Y ++I + RL +A + E M+ GVQ D
Sbjct: 267 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 326
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-----R 296
+Y TLI+ +CKEG +E A L DEM ++G D T+++LI+GL K+ K A +
Sbjct: 327 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFK 386
Query: 297 LHLE--YMNKIGFD--------SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
L+ E + I +D + ++ ++ G + A V++SM + D
Sbjct: 387 LYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDG 446
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
YS ++H C+ + A L+SG ++ ++V GL G EA
Sbjct: 447 SVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 500
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 196/371 (52%), Gaps = 5/371 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ A C + ++ MR AG +P+ VTYN+L+A R L + ++ M E
Sbjct: 15 ILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREE 74
Query: 61 G-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G P++ ++NS+++ L + G+ + A +VF +M+ L P ++N +L+G CK
Sbjct: 75 GNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHE 134
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+L +F + + G VP++VT+ LI CKAG L A ++ ++ + G N +T+T ++
Sbjct: 135 SLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID 194
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ L + M++ G Y +I + K+GR+ A + + +M V+
Sbjct: 195 GFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKP 254
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+V+Y+T+I+ YCK G L++A+ L +M K+G D T++ LI GLC+ + A
Sbjct: 255 DVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELF 314
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
E M ++G + Y ++D K+G ++ A+++ + M K D TYS +++ L K+
Sbjct: 315 ENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKS 374
Query: 356 KRLPSASKLLL 366
R A +LL
Sbjct: 375 ARTKEAHRLLF 385
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 195/386 (50%), Gaps = 10/386 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L+ A+C+ D +++ MRE G P++VT+NS++ G + + + + DEM+
Sbjct: 51 LVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE 110
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV SYN+L+ ++G E+ VF +M L P TF +++ CK + A
Sbjct: 111 GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQA 170
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + +++ G VT+ LI G CK G L A ++E+ G P+ + Y ++
Sbjct: 171 VALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALING 230
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + L E++ M+ K D Y T+I+ + K+G L A ++M+ GV D
Sbjct: 231 YCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPD 290
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
++Y++LI C+E +L A L + M + G + D++T+T LIDG CK GN++ A LH
Sbjct: 291 AITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHD 350
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHNLCKA 355
E + K G ++ Y+ +++ L K + A ++ V D+ Y +++ KA
Sbjct: 351 EMIRK-GVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKA 409
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQK 381
+ + L C+K ++K A K
Sbjct: 410 EFKSVVALLKGFCMKG---LMKEADK 432
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 173/351 (49%), Gaps = 15/351 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI A C+ + + ++ +MRE G+ + VT+ +LI G + L +L ++EM + G
Sbjct: 157 LIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCG 216
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P V YN+L++ +LG+ D A + ++M + P T++ +++G CK D+A
Sbjct: 217 IQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAF 276
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + + K G +P+ +TY+ LI+GLC+ RL A + + + G P+ TYTT++
Sbjct: 277 QLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGH 336
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD-----YMEQMVTDG 236
+ + L + M RKG D Y +I K R KEA Y E V D
Sbjct: 337 CKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDN 396
Query: 237 VQLDIV----------SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
++ D + S L+ +C +G ++ A + M + ++ D ++ILI G
Sbjct: 397 IKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGH 456
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
C+ GN++ A + M + GF N + +V L ++G + A N + +
Sbjct: 457 CRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 507
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 136/286 (47%), Gaps = 15/286 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I YC+ + D+ + + +M + G+ PD +TY+SLI G L+ + +L + ML++G
Sbjct: 262 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 321
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD ++Y +L+ + G ++A + +MI + P T+++++NGL K+ T A
Sbjct: 322 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 381
Query: 122 RMFRGLQKHGFVPELVTYNIL---------------IKGLCKAGRLRTARWILKELGDSG 166
R+ L VP+ + Y+ L +KG C G ++ A + + + D
Sbjct: 382 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 441
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
+ Y+ ++ R + L M R G++ + +++ + G + EA
Sbjct: 442 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 501
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
+ ++ ++T D + LI+L KEG ++A +L M + G
Sbjct: 502 NAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGL 547
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 198/406 (48%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C+ +A +LNRM+ G PD+VTYN +I L +L +LD++L
Sbjct: 143 VISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDN 202
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y L+ G +EA ++ ++M+ L P T+N ++ G+CK + A
Sbjct: 203 CMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAA 262
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L G P++++YNIL++ G+ ++ E+ G PN +TY+ ++
Sbjct: 263 ELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSL 322
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + + +L M K T D + Y +I+A K GRL A M+ M+++G DI
Sbjct: 323 CRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDI 382
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNT++ CK G A + +++ G + ++ +I L G+ A +
Sbjct: 383 VNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPA 442
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M G D + YN ++ L +DG ++ AI + + ME +Y+ ++ LCK +R
Sbjct: 443 MISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRR 502
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ A + ++ G R ++ +++G+ +G R EA ++ + +
Sbjct: 503 IDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSL 548
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 170/347 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+A + +L M G+ PD+ TYN++I G + ++ + +L+ +
Sbjct: 212 ILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSK 271
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV SYN L+ GK DE ++ +M P T++I+++ LC+ D A
Sbjct: 272 GCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEA 331
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + + + P+ +Y+ LI LCK GRL A I+ + +G P+ + Y TI+
Sbjct: 332 ISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAA 391
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+N LEI + ++ G + Y T+I+A G A + M++ GV D
Sbjct: 392 LCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPD 451
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++YN+LI+ C++G +E A LLD+ME+ GF ++ I++ GLCK I A
Sbjct: 452 EITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFA 511
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS 347
M + G N Y +++ +G G A+ + S+ +D + S
Sbjct: 512 EMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDS 558
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 189/393 (48%), Gaps = 11/393 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + F + + ++ + E+ PDV YN++I+G + + + + +L+ M G
Sbjct: 109 LIKGFFNFKNIEKASRVM-EILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARG 167
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ +YN ++ L K A +V ++ + P T+ I++ + A+
Sbjct: 168 FLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAM 227
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + G +P++ TYN +I+G+CK G + A ++ L G P+ I+Y +++
Sbjct: 228 KLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAF 287
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K+ G ++++ M +G + Y +I++ + GR+ EA ++ M+ + D
Sbjct: 288 LNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDT 347
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
SY+ LI+ CKEG+L+ A ++D M G D + ++ LCK GN A LE
Sbjct: 348 YSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQA---LEI 404
Query: 302 MNKI---GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
NK+ G N+ +YN ++ L G A+ + +M K D TY+S++ LC+
Sbjct: 405 FNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCR 464
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ A LL +SG R + V+ GL
Sbjct: 465 DGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGL 497
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 145/337 (43%), Gaps = 40/337 (11%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELV----------------------------- 137
+LN CK + +L L G+ P+++
Sbjct: 74 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 133
Query: 138 -----TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
YN +I G CK R+ A +L + G P+ +TY ++ RK L L+
Sbjct: 134 EPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALK 193
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+L + Y +I A + G + EA +E+M+ G+ D+ +YN +I C
Sbjct: 194 VLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMC 253
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNL 311
KEG +E A L+ + +G + D ++ IL+ G +G +L E ++ G + N
Sbjct: 254 KEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR-GCEPNK 312
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLS 367
Y+ ++ L + G+ID AI+V + M K D+++Y ++ LCK RL A ++
Sbjct: 313 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 372
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ +G ++ L +G +A +I +K+R
Sbjct: 373 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLR 409
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 188/365 (51%), Gaps = 4/365 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ YC++ DA ++ M + PD TY LI G + +L LLD+ML
Sbjct: 111 LVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRE 167
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y L+ + + +A +V +M TP T+N+++NG+C+ D+A
Sbjct: 168 CQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDAR 227
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ L +GF P+ V+Y ++KGLC A R + E+ ++ PN +T+ +++
Sbjct: 228 QILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFF 287
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + +E+L M G T + VI + K GR+ +A +++ M + G D
Sbjct: 288 CRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDT 347
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+SY T++ C+ G+ E A LL+EM ++ ++ T I LC+ G I A L +E
Sbjct: 348 ISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQ 407
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-DSFTYSSMVHNLCKAKRLPS 360
M + G + YN +V+ G++D A+ +F S+ + ++ TY++++ LC A+RL +
Sbjct: 408 MPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEPNTITYTTLLTGLCHAERLDA 467
Query: 361 ASKLL 365
A++LL
Sbjct: 468 AAELL 472
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 196/403 (48%), Gaps = 7/403 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++A C+ F +L+ MR G +P++VTYN +I G R + + +L+ +
Sbjct: 177 VLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSY 236
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD SY +++ L + ++ +F +M+ + P TF++++ C+ + A
Sbjct: 237 GFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERA 296
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + +HG NI+I +CK GR+ A L +G G +P+ I+YTT++K
Sbjct: 297 IEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKG 356
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R +++ E+L+ M RK + + T I + G + +A +EQM G +
Sbjct: 357 LCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVG 416
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+YN L+N +C +G++++A L + + E + T+T L+ GLC A + A L
Sbjct: 417 IVTYNALVNGFCVQGRVDSALELFNSLP---CEPNTITYTTLLTGLCHAERLDAAAELLA 473
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + N+ +N +V + G ++ AI + + M + T+++++ + +
Sbjct: 474 EMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDC 533
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
A +LL + G+ + ++VD L EA ++
Sbjct: 534 NSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQM 576
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 174/377 (46%), Gaps = 7/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
ML+ +C+ + +L+RM E G + + N +I + + + + L+ M
Sbjct: 282 MLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSY 341
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD SY +++ L + G+ ++A + +M+ + P TFN + LC+ D A
Sbjct: 342 GCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQA 401
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + ++G +VTYN L+ G C GR+ +A + L PN ITYTT++
Sbjct: 402 ILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLP---CEPNTITYTTLLTG 458
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ E+L+ M + + + +++ F + G ++EA + ++QM+ G +
Sbjct: 459 LCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPN 518
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++++NTL++ ++ E A LL + +G D T++ ++D L + I+ A
Sbjct: 519 LITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFH 578
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ +G YN I+ L K + D AI+ F M + + TY ++ L +
Sbjct: 579 AVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREG 638
Query: 357 RLPSASKLLLSCLKSGV 373
L A +L GV
Sbjct: 639 LLKEARYVLSELCSRGV 655
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 135/299 (45%), Gaps = 44/299 (14%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
++ LC+ T +A R+ R + G ++ YN L+ G C+ GRL AR ++ +
Sbjct: 76 LIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM---P 132
Query: 167 HAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
P+A TYT +++ C R R L +L M R+ Y ++ A K +A
Sbjct: 133 VPPDAYTYTPLIRGLCDRGRVGD-ALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQA 191
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+++M G +IV+YN +IN C+E +++ A +L+ + GF+ D ++T ++ G
Sbjct: 192 MKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKG 251
Query: 286 LCKA-----------------------------------GNIKGARLHLEYMNKIGFDSN 310
LC A G ++ A L+ M++ G +N
Sbjct: 252 LCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTAN 311
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
N +++ + K G++D A +M D+ +Y++++ LC+A R A +LL
Sbjct: 312 TTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELL 370
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 7/210 (3%)
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
L A +++ G AP+ T +++ R + +L + G D F Y T
Sbjct: 51 LAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNT 110
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
++A + + GRL A + M V D +Y LI C G++ A LLD+M ++
Sbjct: 111 LVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRE 167
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
+ T+T+L++ +CK+ A L+ M G N+ YN I++ + ++ ++D A
Sbjct: 168 CQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDAR 227
Query: 332 NVFESMEV----KDSFTYSSMVHNLCKAKR 357
+ + D+ +Y++++ LC AKR
Sbjct: 228 QILNRLSSYGFQPDTVSYTTVLKGLCAAKR 257
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 108/250 (43%), Gaps = 7/250 (2%)
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A R+ G P++ LI+ LC+ GR A +L+ SG + Y T++
Sbjct: 54 AARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVA 113
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
R + ++++M D + Y +I GR+ +A ++ M+ Q
Sbjct: 114 GYCRYGRLDAARRLIASMPVPP---DAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQP 170
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+V+Y L+ CK A +LDEM +G + T+ ++I+G+C+ + AR L
Sbjct: 171 SVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQIL 230
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKA 355
++ GF + +Y ++ L + + +F E+ V + T+ +V C+
Sbjct: 231 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRG 290
Query: 356 KRLPSASKLL 365
+ A ++L
Sbjct: 291 GMVERAIEVL 300
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
L EA +E+ + G D+ LI C+ G+ A +L E G D + +
Sbjct: 51 LAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNT 110
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---E 338
L+ G C+ G + AR + M + Y ++ L G++ A+++ + M E
Sbjct: 111 LVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRE 167
Query: 339 VKDS-FTYSSMVHNLCKAKRLPSASKLL 365
+ S TY+ ++ +CK+ A K+L
Sbjct: 168 CQPSVVTYTVLLEAVCKSSGFGQAMKVL 195
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 177/342 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C+ ++ M E GI PDVVTYNSLI G ++ + + LL+ M++
Sbjct: 178 ILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKR 237
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P++ +YN+L++ + G A+++ + MI P TFN +++G C+ D A
Sbjct: 238 KVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKA 297
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++K P LVTYN+LI GLC AGR A +L E+ G P+ ITY +++
Sbjct: 298 CEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGI 357
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
RN + + +I + M +G DG YCT+ A +K R EA ++ M G +
Sbjct: 358 FCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPN 417
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ ++N+L+ C +L+ A LL M + G + T+ +L+ GLCKAG + A+ L
Sbjct: 418 LFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLV 477
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS 342
M G + + IV L ++GK D A++ F+ + +S
Sbjct: 478 MMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAES 519
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 195/394 (49%), Gaps = 6/394 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ + + +L M+E G SPDVVT++S++ LS ++ E +E
Sbjct: 111 LIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECA 170
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +N L+H L + + EA ++ ++M + P T+N +++GLCK+ + A
Sbjct: 171 --PDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEAR 228
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + K P LVTYN LI G CK G A +++ + SG P+ +T+ +++
Sbjct: 229 QLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGF 288
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K E+L MK+ + Y +I+ GR EA + + +M G+ DI
Sbjct: 289 CQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDI 348
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN+LI ++C+ ++E A+ + + M ++G D ++ L L K+ A L+
Sbjct: 349 ITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDN 408
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M G NL +N +++ L ++D A ++ M + TY +V LCKA R
Sbjct: 409 MFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGR 468
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ A ++L+ + G++ L S+ +V L G
Sbjct: 469 VDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREG 502
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 187/372 (50%), Gaps = 6/372 (1%)
Query: 32 VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 91
+TYN+LI G + + + LL EM E G PDV +++S++ L G A + F++
Sbjct: 106 ITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE 165
Query: 92 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
+ + P + FNI+++GLCK A +M + + G VP++VTYN LI GLCK+ R
Sbjct: 166 SV--ECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYR 223
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
+ AR +L+ + PN +TY T++ + L +++ M + G D + +
Sbjct: 224 MEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNS 283
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+I+ F + ++ +A + + M ++V+YN LI+ C G+ A LL EM+ +G
Sbjct: 284 LISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRG 343
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
D T+ LI C+ I+ A M + G + +Y + L K + D A
Sbjct: 344 ILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAF 403
Query: 332 ----NVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
N+F++ + + FT++S++ LC ++RL A LL + G S + +V GL
Sbjct: 404 ALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGL 463
Query: 388 RHSGCRREAKKI 399
+G +AK++
Sbjct: 464 CKAGRVDDAKEV 475
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C D +L MR G P TY L+ G + + + ++L M+ G
Sbjct: 424 LMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEG 483
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 108
I P V S +++H L + GK D A F ++ + C ++ +L
Sbjct: 484 IQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPSYQKLL 530
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 201/418 (48%), Gaps = 30/418 (7%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD------ 55
L+ AYC+ + Y +L +M + G P V YN LI G + D+LD
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSE--EPGKDVLDLAEKAY 175
Query: 56 -EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
EMLE G+ + + ++ CL +GK ++A V ++M+ P T+T++ ++ LC
Sbjct: 176 GEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNA 235
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
+ A ++F+ ++++G P++ Y LI CKAG + AR E+ G APN +TY
Sbjct: 236 SKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTY 295
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
T ++ ++RK E+ M KG T + Y +I K G++++A+ + M
Sbjct: 296 TALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKK 355
Query: 235 DGVQL-----------------DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 277
+ V++ ++ +Y L++ CK +++ A LL M +G E +
Sbjct: 356 ENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHV 415
Query: 278 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
+ LIDG CKAG + A+ M + G+D N+ Y+ ++DRL KD ++D A+ V M
Sbjct: 416 VYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKM 475
Query: 338 E----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ Y+ M+ LCK + A KL++ + G A++DG SG
Sbjct: 476 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSG 533
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 168/354 (47%), Gaps = 17/354 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C + + + M+ GI+PDV Y +LI + + + + DEM G
Sbjct: 228 VIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDG 287
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +Y +L+H + K +AN V++ M+ TP T+ +++GLCK + A
Sbjct: 288 CAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKAS 347
Query: 122 RMFRGLQKHGFV-----------------PELVTYNILIKGLCKAGRLRTARWILKELGD 164
++++ ++K P + TY L+ GLCKA +++ AR +LK +
Sbjct: 348 QIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSV 407
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
G PN + Y ++ C + K E+ + M GY + + Y ++I K RL
Sbjct: 408 EGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDL 467
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A + +M+ + ++V Y +I+ CK GK + AY L+ ME++G + T+T +ID
Sbjct: 468 ALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMID 527
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
G K+G ++ L+ M+ G N Y +++ G +D A + E M+
Sbjct: 528 GFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMK 581
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 199/459 (43%), Gaps = 61/459 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C+ F+ L RMR + P+V+TY L+ G L +L M+ G
Sbjct: 48 MISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEG 107
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT---- 117
P +NSL+H + G A ++ + M+ P +NI++ G+C +
Sbjct: 108 CYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDV 167
Query: 118 ------------------------------------DNALRMFRGLQKHGFVPELVTYNI 141
+ A + R + GF+P+ TY+
Sbjct: 168 LDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSK 227
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
+I LC A ++ A + +E+ +G AP+ YTT++ + + M+R G
Sbjct: 228 VIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDG 287
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ Y +I A++K ++ +A + E M++ G +IV+Y LI+ CK GK+E A
Sbjct: 288 CAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKAS 347
Query: 262 LLLDEMEKQGFEC-----------------DKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
+ M+K+ E + +T+ L+DGLCKA +K AR L+ M+
Sbjct: 348 QIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSV 407
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPS 360
G + N Y+ ++D K GK+D A VF +M + +TYSS++ L K KRL
Sbjct: 408 EGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDL 467
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
A K+L L++ ++DGL G EA K+
Sbjct: 468 ALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 506
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 177/407 (43%), Gaps = 26/407 (6%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
L+ + + PD V Y +I+G SL ++D L M P+V +Y L+
Sbjct: 30 LSLLEKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLN 89
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
K R+ MI P FN +++ C++ A ++ + + + G P V
Sbjct: 90 KEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVV 149
Query: 139 YNILIKGLCKAGR-----LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 193
YNILI G+C + L A E+ ++G N + + +C K++ +
Sbjct: 150 YNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNV 209
Query: 194 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 253
+ M KG+ D Y VI ++++A ++M +G+ D+ Y TLI+ +CK
Sbjct: 210 IREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCK 269
Query: 254 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
G +E A DEME+ G + T+T LI K+ + A E M G N+
Sbjct: 270 AGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVT 329
Query: 314 YNCIVDRLGKDGKIDHAINVF-----ESMEVKD----------------SFTYSSMVHNL 352
Y ++D L K GKI+ A ++ E++E+ D FTY ++V L
Sbjct: 330 YTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGL 389
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
CKA ++ A LL S G A++DG +G EA+++
Sbjct: 390 CKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEV 436
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 191/432 (44%), Gaps = 66/432 (15%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID++C+ + + M G +P+VVTY +LI ++ +S + ++ + ML G
Sbjct: 263 LIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKG 322
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT-----------------PCTATF 104
P++ +Y +L+ L + GK ++A+++++ M ++ P T+
Sbjct: 323 CTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTY 382
Query: 105 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 164
+++GLCK A + + + G P V Y+ LI G CKAG+L A+ + + +
Sbjct: 383 GALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLE 442
Query: 165 SGH-----------------------------------APNAITYTTIMKCCFRNRKYKL 189
G+ APN + YT ++ + K
Sbjct: 443 CGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 502
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+++ M+ KG + Y +I F K GR+++ + ++QM + G + V+Y LIN
Sbjct: 503 AYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLIN 562
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
C G L+ A+ LL+EM++ + + +I+G + A L+L + +I +
Sbjct: 563 HCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREFI---ASLYLSF--EISEND 617
Query: 310 NL---EAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT------YSSMVHNLCKAKRLPS 360
++ Y ++D K G+++ A+ + E + F+ + +++ NL A +
Sbjct: 618 SVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKADK 677
Query: 361 ASKLLLSCLKSG 372
A +L + G
Sbjct: 678 AFELYADMISRG 689
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 103/270 (38%), Gaps = 60/270 (22%)
Query: 181 CFRNRKYKLG--LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ------- 231
CF + K G E LS ++++ + D Y +I+ + +EA D++ +
Sbjct: 15 CFAHSLCKSGKWREALSLLEKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCL 74
Query: 232 ----------------------------MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
M+T+G +N+L++ YC+ G AY L
Sbjct: 75 PNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKL 134
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE------------YMNKIGFDSNL 311
L +M + G + + ILI G+C + L L +NK+ SN
Sbjct: 135 LKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNI-SNF 193
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLS 367
C + GK + A NV M K D+ TYS ++ LC A ++ A +L
Sbjct: 194 SRCLCGI------GKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQE 247
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
++G+ ++D +G +A+
Sbjct: 248 MKRNGIAPDVYVYTTLIDSFCKAGFIEQAR 277
Score = 37.7 bits (86), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 7/147 (4%)
Query: 232 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
M T G ++D + + CK GK A LL EK+ F D +T +I GLC+A
Sbjct: 1 MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLL---EKEEFVPDTVLYTKMISGLCEASL 57
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT----YSS 347
+ A L M N+ Y ++ K+ + M + + ++S
Sbjct: 58 FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSGVR 374
+VH C++ A KLL ++ G +
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQ 144
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 185/362 (51%), Gaps = 5/362 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
+L M+ +G+ DVVTY +LI G S L +L+LLDEM G+ P+V Y+ L+
Sbjct: 144 ALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGY 203
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ G+ + +VF+DM + P F +++ LCK T A ++ + + G P +
Sbjct: 204 CRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNV 263
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
VTYN+LI LCK G +R A + KE+ D G AP+ +TY T++ + + L
Sbjct: 264 VTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEE 323
Query: 197 MKRKGYTF--DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
M + D + +VI KIGR+ +A E M G ++V+YN LI + +
Sbjct: 324 MIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRV 383
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
K++ A L+DE+ G E D +T++ILI+G K + A L M + G + L Y
Sbjct: 384 HKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHY 443
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++ + + G ++ A+ +F M+ D+ YS+M+H CK+ + + +L+ L
Sbjct: 444 IPLLAAMCQQGMMERAMGLFNEMDKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDE 503
Query: 372 GV 373
G+
Sbjct: 504 GL 505
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 174/367 (47%), Gaps = 41/367 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE- 59
+LI++ C+ S T+ M + G++PDVVTYN+LIAG + + ++ L+EM++
Sbjct: 268 VLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQG 327
Query: 60 -MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
+ PDV ++NS++H GLCK
Sbjct: 328 DTVVEPDVVTFNSVIH-----------------------------------GLCKIGRMT 352
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A+++ + + G + LVTYN LI G + +++ A ++ EL SG P++ TY+ ++
Sbjct: 353 QAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILI 412
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ + + L M+++G + F Y ++AA + G ++ A +M
Sbjct: 413 NGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEM-DKNCG 471
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
LD ++Y+T+I+ CK G ++ L+ +M +G D T+++LI+ K G+++ A
Sbjct: 472 LDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERV 531
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRL 358
L+ M GF ++ ++ ++ +G+ D + + M K+ ++ + RL
Sbjct: 532 LKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTII---RL 588
Query: 359 PSASKLL 365
P + LL
Sbjct: 589 PQQTPLL 595
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 159/356 (44%), Gaps = 46/356 (12%)
Query: 65 DVWSYNSLMHCLFQLGKPD--EANRVFQDM---ICGDLTPCTATFNIMLNGLCKNRYTDN 119
D SYN+++ L + G +A + DM P ++ ++ GLC +R T
Sbjct: 82 DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+ + R +Q G ++VTY LI+GLC A L A +L E+ SG PN + Y+ +++
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
R+ +++ ++ M R+G D + +I K G+ +A + MV G++
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEP 261
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL----------------- 282
++V+YN LIN CKEG + A L EM+ +G D T+ L
Sbjct: 262 NVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFL 321
Query: 283 --------------------IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
I GLCK G + A E M + G NL YN ++
Sbjct: 322 EEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFL 381
Query: 323 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
+ K+ A+N+ + + + DSFTYS +++ K + A K L + + G++
Sbjct: 382 RVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIK 437
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 123/242 (50%), Gaps = 9/242 (3%)
Query: 133 VPELVTYNILIKGLCKAG--RLRTARWILKELGDSGHA---PNAITYTTIMKCCFRNRKY 187
V + V+YN ++ LC+ G LR AR +L ++ H PNA++YTT+M+ +R+
Sbjct: 80 VRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRT 139
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
+ +L +M+ G D Y T+I L A + +++M GVQ ++V Y+ L
Sbjct: 140 GEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCL 199
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
+ YC+ G+ + + ++M ++G + D T LID LCK G A + M + G
Sbjct: 200 LRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGL 259
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASK 363
+ N+ YN +++ L K+G + A+ + + M+ K D TY++++ L + A
Sbjct: 260 EPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMS 319
Query: 364 LL 365
L
Sbjct: 320 FL 321
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 204/425 (48%), Gaps = 39/425 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ + D + + +RM + G P+ VTY++LI G + +LD+L+EM+E G
Sbjct: 239 LILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG 298
Query: 62 IPPDVWSYN-----------------------------------SLMHCLFQLGKPDEAN 86
I P V++Y +L+ L +LGK + A
Sbjct: 299 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI 358
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
++ M+ L P T T+N ++N LC AL++F ++ HG + TYN +IKGL
Sbjct: 359 GLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGL 418
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C G + A + +++ G P +TY T++ +L MK G D
Sbjct: 419 CLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDE 478
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ Y +++ F K G+L+ A+ Y ++MV G+ + VSY LI+ + K+GK++ A LL
Sbjct: 479 WTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKR 538
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
ME+ G + ++ +I+GL K A + M + G N+ Y ++D L ++G+
Sbjct: 539 MEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGR 598
Query: 327 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
A +F ME + + +TYSS+++ LC+ + A LL + G+ + +
Sbjct: 599 TQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTS 658
Query: 383 VVDGL 387
++DG
Sbjct: 659 LIDGF 663
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 199/386 (51%), Gaps = 4/386 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
IL+++ + +SPDV TY SLI G RN L + + D M++ G P+ +Y++L++ L
Sbjct: 220 ILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLC 279
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
G+ DEA + ++MI + P T+ + + LC + + A+ + ++K G P +
Sbjct: 280 NEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQ 339
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY LI GL + G+L A + ++ G PN +TY ++ ++ L+I M
Sbjct: 340 TYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWM 399
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ G + Y +I G +++A E+M+ G +V+YNTLIN Y +G +
Sbjct: 400 EGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNV 459
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A LLD M++ G E D++T+ L+ G K G ++ A + + M + G + N +Y +
Sbjct: 460 NNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTAL 519
Query: 318 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+D KDGK+D A+++ + ME + +Y+++++ L K R A K+ ++ G+
Sbjct: 520 IDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGL 579
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKI 399
++DGL +G + A KI
Sbjct: 580 LPNVITYTTLIDGLCRNGRTQFAFKI 605
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 187/378 (49%), Gaps = 4/378 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
LN + G + + N+L+ + ++ + +L +ML GI P + ++N+L++ L
Sbjct: 150 FLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILS 209
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ GK EA + + DL+P T+ ++ G C+NR D A +F + K G P V
Sbjct: 210 KKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSV 269
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY+ LI GLC GR+ A +L+E+ + G P TYT + + +E+++ M
Sbjct: 270 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 329
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K++G + Y +I+ ++G+L+ A +M+ +G+ + V+YN LIN C G+
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 389
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A + ME G + T+ +I GLC G+I+ A + E M K+G + YN +
Sbjct: 390 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 449
Query: 318 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
++ G +++A + + M+ D +TY+ +V K +L SAS ++ G+
Sbjct: 450 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509
Query: 374 RILKSAQKAVVDGLRHSG 391
+ A++DG G
Sbjct: 510 NPNPVSYTALIDGHSKDG 527
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 166/336 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + + + ++M + G+ P+ VTYN+LI S +L + M G
Sbjct: 344 LISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHG 403
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ +YN ++ L G ++A +F+ M+ P T+N ++NG +NA
Sbjct: 404 SLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAA 463
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ ++++G P+ TYN L+ G K G+L +A + +E+ + G PN ++YT ++
Sbjct: 464 RLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGH 523
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ K + L +L M+ G + Y VI K R EA ++MV G+ ++
Sbjct: 524 SKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNV 583
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y TLI+ C+ G+ + A+ + +MEK+ + YT++ LI GLC+ G A + L+
Sbjct: 584 ITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKE 643
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M + G + + ++D G+IDHA + M
Sbjct: 644 MERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRM 679
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 112/232 (48%), Gaps = 4/232 (1%)
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
D AP ++K C + + + L+ + G+ F + T++ K ++
Sbjct: 121 DRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVE 180
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A + +QM+ G+Q ++++NTLIN+ K+GK+ A L+L ++ + D +T+T LI
Sbjct: 181 GARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLI 240
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
G C+ N+ A + M K G D N Y+ +++ L +G++D A+++ E M K
Sbjct: 241 LGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIE 300
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+TY+ + LC + A +L+ K G R A++ GL G
Sbjct: 301 PTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLG 352
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 203/440 (46%), Gaps = 39/440 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ + + + M E G P TY LI + ++ +LDEM
Sbjct: 270 ILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATK 329
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+V +Y L+ L + GK +EAN VF+ M+ L P TFN ++NG CK + +A
Sbjct: 330 ACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSA 389
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ ++K P + TYN L++GLC+ + A +L+ + D+G P+ +TY ++
Sbjct: 390 FQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG 449
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + I ++M G DGF + +I K+GRL++A + MV G+ LD
Sbjct: 450 FCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLD 509
Query: 241 IVSYNTLINLYCKEG-----------------------------------KLEAAYLLLD 265
V++ LI+ +CK G KL A +L
Sbjct: 510 EVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLG 569
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+M K G THTILI+G C+AG + LE M + G N+ Y I++ L +G
Sbjct: 570 KMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNG 629
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+++ A + SM + FTY+ +V KA RL A +++ + +K+G +
Sbjct: 630 RVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYS 689
Query: 382 AVVDGLRHSGCRREAKKIQS 401
A++ G S A+ + S
Sbjct: 690 ALLSGFVLSNTAIGARALSS 709
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 190/404 (47%), Gaps = 7/404 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L+ A C+ + + +M +E P+ VTY+ LI G L + L EM+E
Sbjct: 235 LVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 294
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +Y L+ +G D+A ++ +M P T+ I+++ LC+ + A
Sbjct: 295 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 354
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK- 179
+FR + KHG P ++T+N LI G CK G + +A +L + PN TY +M+
Sbjct: 355 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 414
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
C ++ YK L +L + G D Y ++ F K G+L A + M + G++
Sbjct: 415 LCRVSKSYKAFL-LLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEP 473
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D ++ LI+ CK G+LE A +L M K+G D+ T T LIDG CK G K
Sbjct: 474 DGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLF 533
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
E M + + +NC +D LGKD K++ A + M V T++ ++ C+A
Sbjct: 534 ENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRA 593
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ K+L ++G +++GL ++G EA+ I
Sbjct: 594 GETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETI 637
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 175/373 (46%), Gaps = 40/373 (10%)
Query: 54 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 113
LD M E+G Y++L+ CL +L A V++ M+ + ++N LCK
Sbjct: 147 LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 206
Query: 114 NRYTDNA-------LRMFRGLQKHGFV-----------------------------PELV 137
N + A LR+ GL H P V
Sbjct: 207 NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSV 266
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY+ILI GLC+AGRL A + +E+ + G P+ TYT ++K +++L M
Sbjct: 267 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 326
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K + Y +I + G+++EA +M+ G+ I+++N LIN YCKEG +
Sbjct: 327 ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWV 386
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+A+ LL MEK + + T+ L++GLC+ A L L + G + YN +
Sbjct: 387 VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNIL 446
Query: 318 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
VD K+G+++ A N+F SM D FT+++++ LCK RL A+ +L S +K G+
Sbjct: 447 VDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 506
Query: 374 RILKSAQKAVVDG 386
+ + A++DG
Sbjct: 507 SLDEVTFTALIDG 519
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 196/428 (45%), Gaps = 49/428 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D +C+ + + I N M AG+ PD T+ +LI G + L + +L M++
Sbjct: 445 ILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKK 504
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
GI D ++ +L+ HC ++GK + +F++M+ TFN L+ L K+ +
Sbjct: 505 GISLDEVTFTALIDGHC--KIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLN 562
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A M + K+G VP +VT+ ILI+G C+AG + +L+ + +G +PN TYT I+
Sbjct: 563 EANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIII 622
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
N + + IL +M G + + F Y ++ A VK GRL A + MV +G Q
Sbjct: 623 NGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQ 682
Query: 239 LDIVSYNTLINLYC------------KEGKLEAAYL---------LLDEMEKQGFECDKY 277
+ Y+ L++ + G L+A L L +E++K G +
Sbjct: 683 PNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDL 742
Query: 278 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN----V 333
+ L+ GLCK G I A + M K G + +A + I++ K K D+ + V
Sbjct: 743 -YNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYDNCLEFMKLV 800
Query: 334 FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 393
++ V +Y ++H L R ++ AQK V D +RH+G
Sbjct: 801 LDNKFVPSFASYCWVIHGLRNEGR------------------VQEAQKLVSDLVRHTGIE 842
Query: 394 REAKKIQS 401
E + S
Sbjct: 843 EEVEVTPS 850
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 201/460 (43%), Gaps = 58/460 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC+ + + +L+ M + P++ TYN L+ G R S + LL +++ G
Sbjct: 376 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 435
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +YN L+ + G+ + A +F M L P TF +++GLCK + A
Sbjct: 436 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN 495
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAG------------------------------- 150
+ + K G + VT+ LI G CK G
Sbjct: 496 GILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDAL 555
Query: 151 ----RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
+L A +L ++ G P+ +T+T +++ R + L L++L MK+ G + +
Sbjct: 556 GKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNV 615
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ Y +I GR++EA + M + GV + +Y L+ + K G+L+ A+ ++
Sbjct: 616 YTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVST 675
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGAR-------LHLEYMNKIGFDSNL-------- 311
M K G + + + ++ L+ G + GAR L ++ D+N
Sbjct: 676 MVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKC 735
Query: 312 -----EAYNCIVDRLGKDGKIDHAINVFESMEVKDSF---TYSSMVHNLCKAKRLPSASK 363
+ YN +V L K+G+I A + + M F SS++ + CK + + +
Sbjct: 736 GVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEHYCKTCKYDNCLE 795
Query: 364 LLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ L + ++ V+ GLR+ G +EA+K+ S +
Sbjct: 796 FMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDL 835
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 203/440 (46%), Gaps = 39/440 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ + + + M E G P TY LI + ++ +LDEM
Sbjct: 204 ILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATK 263
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+V +Y L+ L + GK +EAN VF+ M+ L P TFN ++NG CK + +A
Sbjct: 264 ACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSA 323
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ ++K P + TYN L++GLC+ + A +L+ + D+G P+ +TY ++
Sbjct: 324 FQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG 383
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + I ++M G DGF + +I K+GRL++A + MV G+ LD
Sbjct: 384 FCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLD 443
Query: 241 IVSYNTLINLYCKEG-----------------------------------KLEAAYLLLD 265
V++ LI+ +CK G KL A +L
Sbjct: 444 EVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLG 503
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+M K G THTILI+G C+AG + LE M + G N+ Y I++ L +G
Sbjct: 504 KMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNG 563
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+++ A + SM + FTY+ +V KA RL A +++ + +K+G +
Sbjct: 564 RVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYS 623
Query: 382 AVVDGLRHSGCRREAKKIQS 401
A++ G S A+ + S
Sbjct: 624 ALLSGFVLSNTAIGARALSS 643
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 190/404 (47%), Gaps = 7/404 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L+ A C+ + + +M +E P+ VTY+ LI G L + L EM+E
Sbjct: 169 LVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 228
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +Y L+ +G D+A ++ +M P T+ I+++ LC+ + A
Sbjct: 229 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 288
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK- 179
+FR + KHG P ++T+N LI G CK G + +A +L + PN TY +M+
Sbjct: 289 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 348
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
C ++ YK L +L + G D Y ++ F K G+L A + M + G++
Sbjct: 349 LCRVSKSYKAFL-LLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEP 407
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D ++ LI+ CK G+LE A +L M K+G D+ T T LIDG CK G K
Sbjct: 408 DGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLF 467
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
E M + + +NC +D LGKD K++ A + M V T++ ++ C+A
Sbjct: 468 ENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRA 527
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ K+L ++G +++GL ++G EA+ I
Sbjct: 528 GETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETI 571
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 175/373 (46%), Gaps = 40/373 (10%)
Query: 54 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 113
LD M E+G Y++L+ CL +L A V++ M+ + ++N LCK
Sbjct: 81 LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 140
Query: 114 NRYTDNA-------LRMFRGLQKH-----------------------------GFVPELV 137
N + A LR+ GL H P V
Sbjct: 141 NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSV 200
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY+ILI GLC+AGRL A + +E+ + G P+ TYT ++K +++L M
Sbjct: 201 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 260
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K + Y +I + G+++EA +M+ G+ I+++N LIN YCKEG +
Sbjct: 261 ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWV 320
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+A+ LL MEK + + T+ L++GLC+ A L L + G + YN +
Sbjct: 321 VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNIL 380
Query: 318 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
VD K+G+++ A N+F SM D FT+++++ LCK RL A+ +L S +K G+
Sbjct: 381 VDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 440
Query: 374 RILKSAQKAVVDG 386
+ + A++DG
Sbjct: 441 SLDEVTFTALIDG 453
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 197/410 (48%), Gaps = 10/410 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D +C+ + + I N M AG+ PD T+ +LI G + L + +L M++
Sbjct: 379 ILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKK 438
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
GI D ++ +L+ HC ++GK + +F++M+ TFN L+ L K+ +
Sbjct: 439 GISLDEVTFTALIDGHC--KIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLN 496
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A M + K+G VP +VT+ ILI+G C+AG + +L+ + +G +PN TYT I+
Sbjct: 497 EANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIII 556
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
N + + IL +M G + + F Y ++ A VK GRL A + MV +G Q
Sbjct: 557 NGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQ 616
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLL--LDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
+ Y+ L++ + A L +++ + ++ + L + + ++ A
Sbjct: 617 PNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHAL 676
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF---TYSSMVHNLC 353
+ + K G + + YN +V L K+G+I A + + M F SS++ + C
Sbjct: 677 KIRDEIKKCGVPTE-DLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEHYC 735
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
K + + + + L + ++ V+ GLR+ G +EA+K+ S +
Sbjct: 736 KTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDL 785
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 184/377 (48%), Gaps = 5/377 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ + +L R+ + G+ PD VTYN L+ G + L+ + ++ + M G
Sbjct: 345 LMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAG 404
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +++ +L+ L +LG+ ++AN + M+ ++ TF +++G CK +
Sbjct: 405 LEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVC 464
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + ++ + T+N + L K +L A +L ++ G P+ +T+T +++
Sbjct: 465 FLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGH 524
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + L L++L MK+ G + + + Y +I GR++EA + M + GV +
Sbjct: 525 CRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNH 584
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y L+ + K G+L+ A+ ++ M K G + + + ++ L+ G + GAR
Sbjct: 585 FTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSST 644
Query: 302 --MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYSSMVHNLCKAK 356
++ S NC+ + + +DHA+ + + ++ V Y+ +V LCK
Sbjct: 645 GDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEG 704
Query: 357 RLPSASKLLLSCLKSGV 373
R+ A +L +K G+
Sbjct: 705 RIIEADQLTQDMVKHGL 721
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 195/368 (52%), Gaps = 4/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ S +L +M E G P+VV Y+++I ++ L++ +++ L EM+ G
Sbjct: 88 IINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRG 147
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V +Y+S++H LG+ +EA +F+ M+ ++ P T TFNI+++GL K A
Sbjct: 148 ISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQ 207
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + + G P + TYN L+ G C ++ A+ + + G AP+ +Y ++K
Sbjct: 208 CVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGH 267
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + +L+ M K T D Y T++ F + GR ++A +E+M + G+ D+
Sbjct: 268 CKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDL 327
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y+ +++ CK+G L+ A+ LL M++ E + + +TILI G+C G ++ AR
Sbjct: 328 MTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSN 387
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
+ G ++ Y ++ L K G + A +F M V +S TY+ ++ +
Sbjct: 388 LFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGD 447
Query: 358 LPSASKLL 365
+A +L+
Sbjct: 448 TSNAGRLI 455
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 193/402 (48%), Gaps = 6/402 (1%)
Query: 1 MLIDAYCQ--FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
+LI+ +C F +++L M + G+ P+ VT+++L+ G + + + ++ L DEM+
Sbjct: 15 ILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMV 74
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
+MG PDV +Y+++++ L ++G A ++ + M P ++ +++ LCK++
Sbjct: 75 KMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLIT 134
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A+ + G P +VTY+ ++ G C GR A + K++ + P+ +T+ ++
Sbjct: 135 EAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILV 194
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ + M KG + Y ++ + ++ EA MV G
Sbjct: 195 DGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCA 254
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+ SYN LI +CK G+++ A LL EM + D T++ L+ G C+ G + A+
Sbjct: 255 PSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKL 314
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
LE M G +L Y+ ++D L K G +D A + ++M+ + F Y+ ++ +C
Sbjct: 315 LEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCN 374
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+L +A +L + G++ ++ GL G EA
Sbjct: 375 FGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEA 416
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 189/386 (48%), Gaps = 4/386 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + M + G PDV+TY+++I G + + ++ LL +M E G P+V Y++++ L
Sbjct: 69 LFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLC 128
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ EA +M+ ++P T++ +L+G C ++ A +F+ + + +P+ V
Sbjct: 129 KDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTV 188
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T+NIL+ GL K G + A+ + + + + G PN TY +M + ++ + M
Sbjct: 189 TFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIM 248
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
RKG Y +I K GR+ EA + +M + D V+Y+TL+ +C++G+
Sbjct: 249 VRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRP 308
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A LL+EM G D T++I++DGLCK G++ A L+ M + + N+ Y +
Sbjct: 309 QDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTIL 368
Query: 318 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ + GK++ A +F ++ VK D TY+ M+ L K A +L G
Sbjct: 369 IQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGC 428
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKI 399
++ G +G A ++
Sbjct: 429 LPNSCTYNVIIQGFLRNGDTSNAGRL 454
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 176/354 (49%), Gaps = 8/354 (2%)
Query: 62 IPPDVWSYNSLMHCLFQLGKPDE---ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
I PDV++ L++C F D A V +M L P TF+ +LNGL
Sbjct: 6 IRPDVYTLTILINC-FCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKII 64
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
+A+++F + K G+ P+++TY+ +I GLCK G A +LK++ + G PN + Y+TI+
Sbjct: 65 DAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTII 124
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+++ +E LS M +G + + Y +++ F +GR EAT +QMV V
Sbjct: 125 DSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVM 184
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D V++N L++ KEG + A + + M ++G E + T+ L+DG C + A+
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKL 244
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
M + G ++ +YN ++ K G+ID A + M K D+ TYS+++ C+
Sbjct: 245 FNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQ 304
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
R A KLL G+ V+DGL G EA ++ ++ +KI
Sbjct: 305 DGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKI 358
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 156/323 (48%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ +C + ++ +M E + PD VT+N L+ G ++ ++ + + + M+E G
Sbjct: 158 ILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKG 217
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V +YN+LM + DEA ++F M+ P ++NI++ G CK+ D A
Sbjct: 218 VEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAK 277
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + P+ VTY+ L+KG C+ GR + A+ +L+E+ G P+ +TY+ ++
Sbjct: 278 GLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGL 337
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ E+L AM+ + F Y +I G+L+ A + + G+Q D+
Sbjct: 338 CKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDV 397
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y +I+ K G A L +M G + T+ ++I G + G+ A +E
Sbjct: 398 VTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEE 457
Query: 302 MNKIGFDSNLEAYNCIVDRLGKD 324
M GF ++ + + D +D
Sbjct: 458 MVGRGFSADSSTFQMLSDLESRD 480
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 101/205 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C+ D +L M ++PD VTY++L+ G ++ + LL+EM
Sbjct: 262 ILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSY 321
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD+ +Y+ ++ L + G DEA + + M + P + I++ G+C + A
Sbjct: 322 GLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAA 381
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F L G P++VTY ++I GL K G A + +++ G PN+ TY I++
Sbjct: 382 RELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQG 441
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFD 205
RN ++ M +G++ D
Sbjct: 442 FLRNGDTSNAGRLIEEMVGRGFSAD 466
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 71/142 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D C+ D + +L M+E+ I P++ Y LI G L + +L +
Sbjct: 332 IVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVK 391
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PDV +Y ++ L + G +EA +F+DM P + T+N+++ G +N T NA
Sbjct: 392 GIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNA 451
Query: 121 LRMFRGLQKHGFVPELVTYNIL 142
R+ + GF + T+ +L
Sbjct: 452 GRLIEEMVGRGFSADSSTFQML 473
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 14/153 (9%)
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY-----MNKIGFDSNLEAYNCIVDRL 321
M+ D YT TILI+ C + + H + M K+G N ++ +++ L
Sbjct: 1 MDLSNIRPDVYTLTILINCFCHSNH---DHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGL 57
Query: 322 GKDGKIDHAINVFESMEVK-----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
KI A+ +F+ M VK D TYS++++ LCK A +LL + G +
Sbjct: 58 SSKAKIIDAVKLFDEM-VKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPN 116
Query: 377 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
++D L EA + S++ IS
Sbjct: 117 VVVYSTIIDSLCKDKLITEAMEFLSEMVNRGIS 149
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 191/378 (50%), Gaps = 4/378 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ A +L R+ + P+VV YN++I + L++ + DL EM+ G
Sbjct: 196 LIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKG 255
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV +Y++L+ LGK +A +F MI ++ P TFNI++N CK+
Sbjct: 256 ISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGK 315
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + K G P VTYN L+ G C + A+ I + G P+ +Y+ ++
Sbjct: 316 TVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGF 375
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +K+ + + M RK D Y ++I K GR+ A ++QM GV +I
Sbjct: 376 CKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNI 435
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN++++ CK +++ A LL + + +GF+ D T++ILI GLC++G ++ AR E
Sbjct: 436 CTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFED 495
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G++ ++ AY ++ +G + A+ + ME + D+ TY ++ +L K
Sbjct: 496 LLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDE 555
Query: 358 LPSASKLLLSCLKSGVRI 375
A KLL + G+ +
Sbjct: 556 NDMAEKLLREMIARGLPL 573
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 184/379 (48%), Gaps = 4/379 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D ++ NR+ +P +N ++ ++ L L +M GI P++ + N L
Sbjct: 67 DDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNIL 126
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
++C QLG A VF ++ P T TF + GLC A + GF
Sbjct: 127 INCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGF 186
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+ ++Y LI GLCK G R A +L+ + + PN + Y TI+ + + +
Sbjct: 187 HFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFD 246
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ S M KG + D Y +I+ F +G+LK+A D +M+ + ++ D+ ++N L+N +C
Sbjct: 247 LFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFC 306
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K+GK++ + D M KQG + + T+ L+DG C + A+ M + G + +++
Sbjct: 307 KDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQ 366
Query: 313 AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
+Y+ +++ K K D A+N+F+ M + D TYSS++ L K+ R+ A +L+
Sbjct: 367 SYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQM 426
Query: 369 LKSGVRILKSAQKAVVDGL 387
GV +++D L
Sbjct: 427 HDRGVPPNICTYNSILDAL 445
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 195/408 (47%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +CQ +++ ++ + G PD +T+ +L G + + D+++ +
Sbjct: 125 ILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVAL 184
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D SY +L+H L ++G+ A + Q + + P +N +++ +CK + + A
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA 244
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G P++VTY+ LI G C G+L+ A + ++ P+ T+ ++
Sbjct: 245 FDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNA 304
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K K G + M ++G + Y +++ + + + +A M GV D
Sbjct: 305 FCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPD 364
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I SY+ +IN +CK K + A L EM ++ D T++ LIDGL K+G I A ++
Sbjct: 365 IQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVD 424
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M+ G N+ YN I+D L K ++D AI + + K D TYS ++ LC++
Sbjct: 425 QMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSG 484
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+L A K+ L G + A ++ G G EA + SK+
Sbjct: 485 KLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKME 532
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 156/363 (42%), Gaps = 39/363 (10%)
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
SY+S D+A +F ++ + TP FN +L L K+++ L + + +
Sbjct: 52 SYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKM 111
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
+ G P LV NILI C+ G + A + ++ G+ P+ IT+TT+ K +
Sbjct: 112 EFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQI 171
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR-------------------------- 221
+ + G+ FD Y T+I K+G
Sbjct: 172 QQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTI 231
Query: 222 ---------LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
+ EA D +MV+ G+ D+V+Y+ LI+ +C GKL+ A L ++M +
Sbjct: 232 IDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENI 291
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
+ D YT IL++ CK G +K + + M K G N YN ++D +++ A +
Sbjct: 292 KPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKS 351
Query: 333 VFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
+F +M D +YS M++ CK K+ A L + + +++DGL
Sbjct: 352 IFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLS 411
Query: 389 HSG 391
SG
Sbjct: 412 KSG 414
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 142/277 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++A+C+ G T+ + M + GI P+ VTYNSL+ G ++ + + + M +
Sbjct: 300 ILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG 359
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD+ SY+ +++ ++ K DEA +F++M ++ P T++ +++GL K+ A
Sbjct: 360 GVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYA 419
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L++ + G P + TYN ++ LCK ++ A +L + D G P+ TY+ ++K
Sbjct: 420 LQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKG 479
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K + ++ + KGY D + Y +I F G EA + +M +G D
Sbjct: 480 LCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPD 539
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 277
+Y +I K+ + + A LL EM +G + Y
Sbjct: 540 AKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNFY 576
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 112/243 (46%), Gaps = 4/243 (1%)
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
N I+Y++ N + + + + R+ T F + ++ + VK
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
++M G++ ++V+ N LIN +C+ G + A+ + ++ K G+ D T T L GLC
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 345
G I+ A L + + +GF + +Y ++ L K G+ A+++ + ++ + Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
++++ ++CK K + A L + G+ A++ G G ++A + +K+ +
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288
Query: 406 AKI 408
I
Sbjct: 289 ENI 291
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 188/390 (48%), Gaps = 4/390 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID F+ + ++ + G D YN LI R+ L ++++ EM G
Sbjct: 71 LIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKG 130
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD ++Y L++ L + G+ EA F M+ LTP T+N++++ K D AL
Sbjct: 131 SEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMAL 190
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++ GF P +VTYNIL+ LC AGR+ AR + ++ G +P++ TY+T++
Sbjct: 191 GLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGL 250
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + + ++ M +G D Y +++A K G + M++M G D
Sbjct: 251 GKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDA 310
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
S+NT+++ K K +AA + M + G + D ++ ILID + G+ AR LE
Sbjct: 311 FSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEE 370
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M + GF + YN ++ L DG++D A V E ME D TY+ ++ L K
Sbjct: 371 MVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGE 430
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
A++L GV + +DGL
Sbjct: 431 NQRAARLFQQMKDKGVEPDTLSYAVRIDGL 460
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 186/395 (47%), Gaps = 4/395 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + + D+ + M+ G PD TY L+ + + + D MLE
Sbjct: 105 VLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLER 164
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P++ +YN LM ++G+ D A +F +M P T+NI+L+ LC A
Sbjct: 165 GLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAA 224
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F + G P+ TY+ L+ GL K+GR+ A + +E+ D G A + + Y +++
Sbjct: 225 RKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLAT 284
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ +++ M RKG+ D F + T++ A K + A + +MV G + D
Sbjct: 285 LAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPD 344
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++SYN LI+ Y + G A +L+EM + GF + T+ LI L G + A LE
Sbjct: 345 LISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLE 404
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G ++ YN ++D LGK G+ A +F+ M+ K D+ +Y+ + L
Sbjct: 405 EMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDD 464
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
RL A L G + K+ + ++ +G
Sbjct: 465 RLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAG 499
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 143/293 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+DA C A + ++M G SPD TY++L+ G ++ + + + EM++
Sbjct: 210 ILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDR 269
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ D+ +YNSL+ L + G D ++ ++M P +FN +++ L K D A
Sbjct: 270 GVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAA 329
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + + G P+L++YNILI + G AR +L+E+ ++G P TY +++
Sbjct: 330 REVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHW 389
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + +L M+ G D Y ++ K G + A +QM GV+ D
Sbjct: 390 LATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPD 449
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
+SY I+ + +L+ A +L +M+ G DK + ILI +AG+ +
Sbjct: 450 TLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTE 502
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 156/360 (43%), Gaps = 39/360 (10%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
T+L M G T LI R + + DL ++ P V ++ L+ L
Sbjct: 16 TLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDIL 75
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
G+ + A V++ ++ +N+++ ++ D+A+ MFR ++ G P+
Sbjct: 76 VNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDE 135
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
TY L+ L KAGR++ AR + + G PN TY +M
Sbjct: 136 YTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMD----------------- 178
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
AF K+G+L A +M G Q +V+YN L++ C G+
Sbjct: 179 ------------------AFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGR 220
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+ AA L +M G D YT++ L++GL K+G ++ A M G +L YN
Sbjct: 221 VGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNS 280
Query: 317 IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++ L K G +D + + M K D+F++++++ L KA + +A ++ ++SG
Sbjct: 281 LLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESG 340
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 153/336 (45%), Gaps = 4/336 (1%)
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
++ L G D + ++M+ T ++ + + +A +F +
Sbjct: 1 MLVVLASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFA 60
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
P + + LI L +G A + K+L G + Y +++ R+ + +
Sbjct: 61 CSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAM 120
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
E+ MK KG D + Y ++ A K GR++EA + + M+ G+ +I +YN L++ +
Sbjct: 121 EMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAF 180
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
K G+L+ A L EM+++GF+ T+ IL+D LC AG + AR M G +
Sbjct: 181 RKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDS 240
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLS 367
Y+ +V+ LGK G+++ A VF M + D Y+S++ L KA + KL+
Sbjct: 241 YTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKE 300
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ G + ++D L + A+++ +++
Sbjct: 301 MSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARM 336
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 203/440 (46%), Gaps = 39/440 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ + + + M E G P TY LI + ++ +LDEM
Sbjct: 247 ILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATK 306
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+V +Y L+ L + GK +EAN VF+ M+ L P TFN ++NG CK + +A
Sbjct: 307 ACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSA 366
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ ++K P + TYN L++GLC+ + A +L+ + D+G P+ +TY ++
Sbjct: 367 FQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG 426
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + I ++M G DGF + +I K+GRL++A + MV G+ LD
Sbjct: 427 FCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLD 486
Query: 241 IVSYNTLINLYCKEG-----------------------------------KLEAAYLLLD 265
V++ LI+ +CK G KL A +L
Sbjct: 487 EVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLG 546
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+M K G THTILI+G C+AG + LE M + G N+ Y I++ L +G
Sbjct: 547 KMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNG 606
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+++ A + SM + FTY+ +V KA RL A +++ + +K+G +
Sbjct: 607 RVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYS 666
Query: 382 AVVDGLRHSGCRREAKKIQS 401
A++ G S A+ + S
Sbjct: 667 ALLSGFVLSNTAIGARALSS 686
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 190/404 (47%), Gaps = 7/404 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L+ A C+ + + +M +E P+ VTY+ LI G L + L EM+E
Sbjct: 212 LVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 271
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +Y L+ +G D+A ++ +M P T+ I+++ LC+ + A
Sbjct: 272 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 331
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK- 179
+FR + KHG P ++T+N LI G CK G + +A +L + PN TY +M+
Sbjct: 332 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 391
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
C ++ YK L +L + G D Y ++ F K G+L A + M + G++
Sbjct: 392 LCRVSKSYKAFL-LLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEP 450
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D ++ LI+ CK G+LE A +L M K+G D+ T T LIDG CK G K
Sbjct: 451 DGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLF 510
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
E M + + +NC +D LGKD K++ A + M V T++ ++ C+A
Sbjct: 511 ENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRA 570
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ K+L ++G +++GL ++G EA+ I
Sbjct: 571 GETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETI 614
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 175/373 (46%), Gaps = 40/373 (10%)
Query: 54 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 113
LD M E+G Y++L+ CL +L A V++ M+ + ++N LCK
Sbjct: 124 LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 183
Query: 114 NRYTDNA-------LRMFRGLQKHGFV-----------------------------PELV 137
N + A LR+ GL H P V
Sbjct: 184 NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSV 243
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY+ILI GLC+AGRL A + +E+ + G P+ TYT ++K +++L M
Sbjct: 244 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 303
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K + Y +I + G+++EA +M+ G+ I+++N LIN YCKEG +
Sbjct: 304 ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWV 363
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+A+ LL MEK + + T+ L++GLC+ A L L + G + YN +
Sbjct: 364 VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNIL 423
Query: 318 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
VD K+G+++ A N+F SM D FT+++++ LCK RL A+ +L S +K G+
Sbjct: 424 VDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 483
Query: 374 RILKSAQKAVVDG 386
+ + A++DG
Sbjct: 484 SLDEVTFTALIDG 496
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 197/410 (48%), Gaps = 10/410 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D +C+ + + I N M AG+ PD T+ +LI G + L + +L M++
Sbjct: 422 ILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKK 481
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
GI D ++ +L+ HC ++GK + +F++M+ TFN L+ L K+ +
Sbjct: 482 GISLDEVTFTALIDGHC--KIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLN 539
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A M + K+G VP +VT+ ILI+G C+AG + +L+ + +G +PN TYT I+
Sbjct: 540 EANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIII 599
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
N + + IL +M G + + F Y ++ A VK GRL A + MV +G Q
Sbjct: 600 NGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQ 659
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLL--LDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
+ Y+ L++ + A L +++ + ++ + L + + ++ A
Sbjct: 660 PNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHAL 719
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF---TYSSMVHNLC 353
+ + K G + + YN +V L K+G+I A + + M F SS++ + C
Sbjct: 720 KIRDEIKKCGVPTE-DLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEHYC 778
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
K + + + + L + ++ V+ GLR+ G +EA+K+ S +
Sbjct: 779 KTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDL 828
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 184/377 (48%), Gaps = 5/377 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ + +L R+ + G+ PD VTYN L+ G + L+ + ++ + M G
Sbjct: 388 LMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAG 447
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +++ +L+ L +LG+ ++AN + M+ ++ TF +++G CK +
Sbjct: 448 LEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVC 507
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + ++ + T+N + L K +L A +L ++ G P+ +T+T +++
Sbjct: 508 FLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGH 567
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + L L++L MK+ G + + + Y +I GR++EA + M + GV +
Sbjct: 568 CRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNH 627
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y L+ + K G+L+ A+ ++ M K G + + + ++ L+ G + GAR
Sbjct: 628 FTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSST 687
Query: 302 --MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYSSMVHNLCKAK 356
++ S NC+ + + +DHA+ + + ++ V Y+ +V LCK
Sbjct: 688 GDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEG 747
Query: 357 RLPSASKLLLSCLKSGV 373
R+ A +L +K G+
Sbjct: 748 RIIEADQLTQDMVKHGL 764
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 175/369 (47%), Gaps = 4/369 (1%)
Query: 8 QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 67
F + D + NRM P VV + ++ S L L +M +GIP DV+
Sbjct: 51 NFNTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVY 110
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+ +++ L + D V + P TATF ++ GLC AL +F +
Sbjct: 111 TLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKM 170
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
GF P VTY LI GLCK G R A +L+ + PN ITY TI+ C F++R+
Sbjct: 171 VGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQV 230
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
L I S M KG + + Y ++I K K M +MV + ++V + TL
Sbjct: 231 NEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTL 290
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
++ CKEG + A+ ++D M ++G E D T+T L+DG C + A + M + G
Sbjct: 291 VDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGC 350
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASK 363
N+ +Y+ +++ K +ID A+ +FE M V + TY++++H LC RL A
Sbjct: 351 APNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIA 410
Query: 364 LLLSCLKSG 372
L + SG
Sbjct: 411 LFHEMVASG 419
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 197/403 (48%), Gaps = 4/403 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+++C D G+++L ++ + G PD T+ +LI G + +L L D+M+
Sbjct: 114 IVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGE 173
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ +Y +L+H L ++G A R+ + M+ + P T+N +++ L K+R + A
Sbjct: 174 GFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEA 233
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F + G P + TYN +I GLCK + ++ E+ DS PN + +TT++
Sbjct: 234 LNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDA 293
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + +++ M ++G D Y ++ + EA + MV G +
Sbjct: 294 LCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPN 353
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++SY+TLIN YCK +++ A L +EM ++ + T+ LI GLC G ++ A
Sbjct: 354 VISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFH 413
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M G +L Y ++D L K +D A+ + +++E D +Y+ ++ +C+
Sbjct: 414 EMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVG 473
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L +A L S G+ +++GL G EA K+
Sbjct: 474 ELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKL 516
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 164/326 (50%), Gaps = 4/326 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C+F + T++N M ++ I P+VV + +L+ + +++ + D++D M++ G
Sbjct: 255 IIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRG 314
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ PDV +Y +LM HCL + DEA++VF M+ P +++ ++NG CK + D
Sbjct: 315 VEPDVVTYTALMDGHCL--RSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDK 372
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+ +F + + VP +VTYN LI GLC GRLR A + E+ SG P+ +TY ++
Sbjct: 373 AMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLD 432
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ R + +L A++ D Y VI ++G L+ A D + + G+
Sbjct: 433 YLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHP 492
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+ +Y +IN C +G L A L EM G D T+ ++ G + A L
Sbjct: 493 DVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLL 552
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDG 325
+ M GF ++ IV+ L DG
Sbjct: 553 QEMLGRGFSADASTITLIVEMLSDDG 578
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 182/387 (47%), Gaps = 4/387 (1%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
+M GI DV T +I + + +L ++ ++G PD ++ +L+ L G
Sbjct: 99 QMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEG 158
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K EA +F M+ P T+ +++GLCK + A+R+ R + + P ++TYN
Sbjct: 159 KIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYN 218
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
+I L K ++ A I E+ G +PN TY +I+ + ++K +++ M
Sbjct: 219 TIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDS 278
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
+ + T++ A K G + A D ++ M+ GV+ D+V+Y L++ +C +++ A
Sbjct: 279 KIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEA 338
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
+ D M ++G + +++ LI+G CK I A E M + N+ YN ++
Sbjct: 339 DKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHG 398
Query: 321 LGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
L G++ AI +F M ++ D TY ++ LCK + L A +L + S +
Sbjct: 399 LCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPD 458
Query: 377 KSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ V+DG+ G A + S +
Sbjct: 459 IQSYNIVIDGMCRVGELEAAGDLFSSL 485
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 83/162 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ D +L + + ++PD+ +YN +I G R L + DL +
Sbjct: 429 ILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSK 488
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDVW+Y +++ L G EA ++F++M +P T+N++ G +N T +A
Sbjct: 489 GLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSA 548
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
+++ + + GF + T ++++ L G ++ + IL E
Sbjct: 549 IQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEF 590
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 6/149 (4%)
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+M+ G D YT I+I+ C + L + K+G + + ++ L +G
Sbjct: 99 QMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEG 158
Query: 326 KIDHAINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
KI A+++F+ M V + F TY +++H LCK +A +LL S ++
Sbjct: 159 KIGEALHLFDKM-VGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITY 217
Query: 381 KAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
++D L EA I S++ IS
Sbjct: 218 NTIIDCLFKDRQVNEALNIFSEMIAKGIS 246
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 203/408 (49%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D +C+ I M +G++P+ TY +LI G + + +L + DEM+
Sbjct: 316 LLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITR 375
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ +V +YN+++ + + G+ +A +F +M+ L P T T+N++++G K+ A
Sbjct: 376 GLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKA 435
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++ P TY++LI GLC + L+ A +L ++ +G PN Y T++K
Sbjct: 436 CELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKA 495
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ +Y++ +E+L M G D F Y +I + +++EA + M G++ +
Sbjct: 496 YVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPN 555
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y INLY K G+++ A +M G + +TILI G C GN A +
Sbjct: 556 AHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFK 615
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAK 356
M + G ++ AY+ I+ L K+GK A+ VF ++ V D F Y+S++ CK
Sbjct: 616 CMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEG 675
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ AS+L L +G+ +++GL G +A+++ +I
Sbjct: 676 DIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIE 723
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 184/368 (50%), Gaps = 3/368 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C +L++M G+ P+V Y +LI + S +++LL M+
Sbjct: 456 VLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIAN 515
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD++ YN L+ L + K +EA + DM + P T+ +N K+ A
Sbjct: 516 GVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVA 575
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R F+ + G VP V Y ILIKG C G A K + + G P+ Y+ I+
Sbjct: 576 ERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHS 635
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+N K K + + + G D F Y ++I+ F K G +++A+ ++M+ +G+ +
Sbjct: 636 LSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPN 695
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV YNTLIN CK G++ A L DE+E++ D T++ +IDG CK+GN+ A +
Sbjct: 696 IVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFD 755
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT---YSSMVHNLCKAKR 357
M G + Y ++D GK+G ++ A+++F + K + ++S++ + CK +
Sbjct: 756 EMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGK 815
Query: 358 LPSASKLL 365
+ A +L
Sbjct: 816 VIEARELF 823
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 193/412 (46%), Gaps = 41/412 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID + + + + I + M G+ +VVTYN++I G + ++ ++ L +EML G
Sbjct: 352 LIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAG 411
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC--------- 112
+ PD W+YN L+ + +A + +M LTP T++++++GLC
Sbjct: 412 LEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKAN 471
Query: 113 ---------------------------KNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
++RY + A+ + + + +G +P+L YN LI G
Sbjct: 472 EVLDQMIRNGVKPNVFMYGTLIKAYVQESRY-EMAIELLKIMIANGVLPDLFCYNCLIIG 530
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LC+A ++ A+ +L ++G+ G PNA TY + ++ + ++ M G +
Sbjct: 531 LCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPN 590
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y +I +G EA + M+ G+ DI +Y+ +I+ K GK + A +
Sbjct: 591 NVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFL 650
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+ K G D + + LI G CK G+I+ A + M G + N+ YN +++ L K G
Sbjct: 651 KFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLG 710
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
++ A +F+ +E V D TYS+++ CK+ L A KL + G+
Sbjct: 711 EVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGI 762
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 186/399 (46%), Gaps = 5/399 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I A+C+ G +L+ M E P++ TYN+ I G + + +L++ M+E G
Sbjct: 248 VIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y L+ + + EA +F+ M L P T+ +++G K + AL
Sbjct: 307 LGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEAL 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + G +VTYN +I G+ KAG + A + E+ +G P+ TY ++
Sbjct: 367 RIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGY 426
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ E+L+ MK + T F Y +I+ L++A + ++QM+ +GV+ ++
Sbjct: 427 LKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNV 486
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
Y TLI Y +E + E A LL M G D + + LI GLC+A ++ A++ L
Sbjct: 487 FMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVD 546
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M + G N Y ++ K G+I A F+ M V ++ Y+ ++ C
Sbjct: 547 MGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGN 606
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
A L+ G+ A A++ L +G +EA
Sbjct: 607 TVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEA 645
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 184/385 (47%), Gaps = 23/385 (5%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M +GI P+ V Y LI G +L MLE G+ PD+ +Y++++H L + GK
Sbjct: 582 MLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGK 641
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
EA VF + + P +N +++G CK + A +++ + +G P +V YN
Sbjct: 642 TKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNT 701
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
LI GLCK G + AR + E+ + P+ +TY+TI+ ++ ++ M KG
Sbjct: 702 LINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKG 761
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ DG+ YC +I K G L++A + V + ++N+LI+ +CK GK+ A
Sbjct: 762 ISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEAR 820
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR---LHLEYMNKIG----FDSNLEAY 314
L D+M + + T+TILID KA ++ A L +E N I + S L +Y
Sbjct: 821 ELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSY 880
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
N I +R I++F+ ME + D+ Y M CK + A KLL L
Sbjct: 881 NQIGNRF-------KMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLV 933
Query: 371 SGVRILKSAQKAVVDGLRHSGCRRE 395
G+++ + V D L C+ +
Sbjct: 934 EGIKL----EDDVFDALIFHLCKEK 954
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 181/377 (48%), Gaps = 5/377 (1%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G P ++ N+L+ + +++ + M+E I PDV++Y +++ ++G +
Sbjct: 202 GFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKG 261
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
V +M + P T+N + GLC+ D AL + + + + G P+ TY +L+ G
Sbjct: 262 KMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDG 320
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
CK R + A+ I + + SG PN TYT ++ + + L I M +G +
Sbjct: 321 FCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLN 380
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y +I K G + +A +M+ G++ D +YN LI+ Y K + A LL
Sbjct: 381 VVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLA 440
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM+ + +T+++LI GLC + +++ A L+ M + G N+ Y ++ ++
Sbjct: 441 EMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQES 500
Query: 326 KIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+ + AI + + M + D F Y+ ++ LC+AK++ A LL+ + G++
Sbjct: 501 RYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYG 560
Query: 382 AVVDGLRHSGCRREAKK 398
A ++ SG + A++
Sbjct: 561 AFINLYSKSGEIQVAER 577
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 164/340 (48%), Gaps = 7/340 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ + + + M GI+P++V YN+LI G + ++ + +L DE+ E
Sbjct: 667 LISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKD 726
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +Y++++ + G EA ++F +MI ++P + I+++G K + AL
Sbjct: 727 LVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKAL 786
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F Q+ V L +N LI CK G++ AR + ++ D PN +TYT ++
Sbjct: 787 SLFHEAQQKS-VGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAY 845
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + ++ M+ + + Y +++ ++ +IG + + M G+ D
Sbjct: 846 GKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDA 905
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y + + YCKEGK A LL++ +G + + LI LCK I LE
Sbjct: 906 IAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTV---LEL 962
Query: 302 MNKIGFDS-NLEAYNCIVDRLG--KDGKIDHAINVFESME 338
++++G + +L + C LG K G D A V M+
Sbjct: 963 LSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQ 1002
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 147/307 (47%), Gaps = 3/307 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ + + + E + PDVVTY+++I G ++ L+ + L DEM+ G
Sbjct: 702 LINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKG 761
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD + Y L+ + G ++A +F + + +A FN +++ CK+ A
Sbjct: 762 ISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSA-FNSLIDSFCKHGKVIEAR 820
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + P +VTY ILI KA + A + ++ PN +TYT+++
Sbjct: 821 ELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSY 880
Query: 182 FR-NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++K+ + + M+ +G D Y + +A+ K G+ EA + + + +G++L+
Sbjct: 881 NQIGNRFKM-ISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLE 939
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++ LI CKE ++ LL EM K+ T L+ G K+GN A L
Sbjct: 940 DDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLG 999
Query: 301 YMNKIGF 307
M ++G+
Sbjct: 1000 VMQRLGW 1006
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 136/300 (45%), Gaps = 5/300 (1%)
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
LG +EA+ VF I P N ++ L K +++ + + VP++ T
Sbjct: 185 LGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYT 244
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
Y +IK CK G + + +L E+ + PN TY + + LE+ M
Sbjct: 245 YTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMM 303
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
KG DG Y ++ F K R KEA E M + G+ + +Y LI+ + KEG +E
Sbjct: 304 EKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIE 363
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A + DEM +G + + T+ +I G+ KAG + A M G + + YN ++
Sbjct: 364 EALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLI 423
Query: 319 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
D K + A + M+ + FTYS ++ LC + L A+++L +++GV+
Sbjct: 424 DGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVK 483
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 115/275 (41%), Gaps = 29/275 (10%)
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
L +Y+IL LC +G + A +L++L + P LEIL
Sbjct: 120 LHSYSILAIRLCNSGLIHQADNMLEKLLQTRKPP---------------------LEILD 158
Query: 196 AMKRKGYTFDGFG---YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
++ R F G + I F +G L EA+ +++G ++ N L+
Sbjct: 159 SLVRCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLL 218
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K + + + M + D YT+T +I CK G++ ++ L M K NL
Sbjct: 219 KANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLF 277
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 368
YN + L + G +D A+ V + M K D TY+ +V CK KR A + S
Sbjct: 278 TYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESM 337
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
SG+ + A++DG G EA +I+ ++
Sbjct: 338 PSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEM 372
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 69/175 (39%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDAY + + + M I P+ +TY SL+ + + L +M
Sbjct: 840 ILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEAR 899
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI D +Y + + GK EA ++ + + F+ ++ LCK +
Sbjct: 900 GIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTV 959
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
L + + K T N L+ G K+G A +L + G P +++ T
Sbjct: 960 LELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLT 1014
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 201/442 (45%), Gaps = 40/442 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A+C+ T+L RM++ GI+P TYN+L++ R + + ++++ M G
Sbjct: 251 LLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFG 310
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNA 120
PD+W+YN L L Q GK DEA ++ +M ++P T+N +++ K + + +A
Sbjct: 311 FEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDA 370
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + ++ G LVT+NI++KGLC+ G+L A LK + + G AP+ ITY T++
Sbjct: 371 LNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDA 430
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ R ++ M R G D F T++ K R +EA + + G D
Sbjct: 431 YCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPD 490
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
VSY T++ Y KE K E A L DEM K+ YT+ LI GLC G + A L
Sbjct: 491 EVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLN 550
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDG----------------------------------- 325
+ K G + YN I+ K+G
Sbjct: 551 ELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHG 610
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
K++ AI +FES K D TY++++ LCK + +A G++
Sbjct: 611 KLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYN 670
Query: 382 AVVDGLRHSGCRREAKKIQSKI 403
V+ L +G EA+ + K+
Sbjct: 671 VVLSALSEAGRSEEAQNMLHKL 692
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 189/377 (50%), Gaps = 5/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGI-SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
+L CQ D + + + M I SPDVVTYN+L+ + S +L+LL+EM +
Sbjct: 320 VLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRD 379
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G+ + ++N ++ L + G+ +EA + M L P T+N +++ CK R
Sbjct: 380 KGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAK 439
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + + + G + T N L+ LCK R A +L+ G P+ ++Y T+M
Sbjct: 440 AFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMA 499
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
F+ K + L + M ++ T + Y T+I IG+L EA D + +++ G+
Sbjct: 500 AYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVP 559
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D +YN +I+ YCKEG LE A+ ++M + F+ D T L++GLC G ++ A
Sbjct: 560 DDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLF 619
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
E + G ++ YN ++ L KDG +D A++ F ME + D+FTY+ ++ L +A
Sbjct: 620 ESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEA 679
Query: 356 KRLPSASKLLLSCLKSG 372
R A +L +SG
Sbjct: 680 GRSEEAQNMLHKLDESG 696
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 176/352 (50%), Gaps = 5/352 (1%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
+ P+ T+N L+ L+ +L L M G+ PDV +YN+L+ + G EA
Sbjct: 206 LHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEAR 265
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ M + P AT+N +++ + + A + + GF P+L TYN+L GL
Sbjct: 266 TLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGL 325
Query: 147 CKAGRLRTARWILKELGD-SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
C+AG++ A + E+ S +P+ +TY T++ CF+ ++ L +L M+ KG
Sbjct: 326 CQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSS 385
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ V+ + G+L+EA ++ M +G+ D+++YNTLI+ YCK + A++L+D
Sbjct: 386 LVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMD 445
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM + G + D +T L+ LCK + A L + GF + +Y ++ K+
Sbjct: 446 EMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKEN 505
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
K + A+ +++ M +TY++++ LC +L A L +K G+
Sbjct: 506 KPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGL 557
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 188/426 (44%), Gaps = 40/426 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+DA ++ +L MR+ G+ +VT+N ++ G R L +L L M E G
Sbjct: 357 LVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEG 416
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +YN+L+ + +A + +M+ L T T N +L LCK + + A
Sbjct: 417 LAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAE 476
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ R + GFVP+ V+Y ++ K + A ++ E+ P+ TY T++K
Sbjct: 477 ELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGL 536
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K ++ L+ + +KG D Y +I A+ K G L++A + +M+ + + D+
Sbjct: 537 CTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDV 596
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+ NTL+N C GKLE A L + ++G + D T+ LI LCK G++ A
Sbjct: 597 VTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFAD 656
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM------------------------ 337
M G + YN ++ L + G+ + A N+ +
Sbjct: 657 MEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKT 716
Query: 338 ----EVK------------DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
EVK D +Y+ V LC +L A +L ++ G+ + S
Sbjct: 717 GKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYI 776
Query: 382 AVVDGL 387
+++GL
Sbjct: 777 TLMEGL 782
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 157/318 (49%), Gaps = 11/318 (3%)
Query: 64 PDVWSYNSLMHCLFQLGK--PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + + N+++ L + P + VF+ +I L P TFN++++ C +AL
Sbjct: 171 PSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADAL 230
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+Q G P++VTYN L+K C+ G L AR +L + G AP TY T++
Sbjct: 231 STLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAY 290
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA---TDYMEQMVTDGVQ 238
R K ++ AM G+ D + Y + A + G++ EA D ME + V
Sbjct: 291 ARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSI--VS 348
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D+V+YNTL++ K + A LL+EM +G + TH I++ GLC+ G ++ A
Sbjct: 349 PDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGR 408
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
L+ M + G ++ YN ++D K + A + + M D+FT +++++NLCK
Sbjct: 409 LKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCK 468
Query: 355 AKRLPSASKLLLSCLKSG 372
KR A +LL S + G
Sbjct: 469 EKRYEEAEELLRSPPQRG 486
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 169/363 (46%), Gaps = 9/363 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LIDAYC+ + + +++ M +G+ D T N+L+ + + +LL + G
Sbjct: 427 LIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRG 486
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD SY ++M F+ KP+ A ++ +M LTP T+N ++ GLC A+
Sbjct: 487 FVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAI 546
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
L K G VP+ TYNI+I CK G L A ++ ++ P+ +T T+M
Sbjct: 547 DKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGL 606
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + +++ + KG D Y T+I A K G + A + M G+Q D
Sbjct: 607 CLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDA 666
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL--CKAGNIKGARLHL 299
+YN +++ + G+ E A +L ++++ G +++++ ++ K G +
Sbjct: 667 FTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDC 726
Query: 300 EY-MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
E N G D E+YN V L G++ A V + M K DS TY +++ L K
Sbjct: 727 ESGGNAKGGDQ--ESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIK 784
Query: 355 AKR 357
++
Sbjct: 785 RQK 787
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 86/182 (47%), Gaps = 5/182 (2%)
Query: 220 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
G L +A + M G+ D+V+YNTL+ +C++G L A LL M+K+G + T+
Sbjct: 224 GTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATY 283
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME- 338
L+ + G IK A +E M GF+ +L YN + L + GK+D A + + ME
Sbjct: 284 NTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEH 343
Query: 339 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
D TY+++V K +R A LL GV+ VV GL G
Sbjct: 344 LSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLE 403
Query: 395 EA 396
EA
Sbjct: 404 EA 405
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 36/222 (16%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I AYC+ + + N+M E PDVVT N+L+ G + L ++ L + E
Sbjct: 566 IIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEK 625
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G DV +YN+L+ L + G D A F DM L P T+N++L+ L + ++ A
Sbjct: 626 GKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEA 685
Query: 121 LRMFRGLQKHGFVPELVTYNIL------------------------------------IK 144
M L + G + E +Y ++ +K
Sbjct: 686 QNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVK 745
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
LC G+L+ A+ +L E+ G + ++ TY T+M+ + +K
Sbjct: 746 ELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIKRQK 787
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 200/363 (55%), Gaps = 7/363 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HC 75
+ M + I +V+++N ++ G + L+ + D++++M G+ P+V +YN+L+ +C
Sbjct: 142 VYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYC 201
Query: 76 -LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
+ ++GK +A+ + ++M+ + P T+NI+++G CK+ A+R+F +Q+ G P
Sbjct: 202 KMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRP 261
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
+VTYNILI GLC G++ A + ++ S PN +T+ ++ +N+ + +
Sbjct: 262 NVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLF 321
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
+ M+++G + Y T+I A+ K GR+++A M+ G+ ++ +YN LI C++
Sbjct: 322 NDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRK 381
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
G ++AA L++EM + D T+ ILID LCK G + A L+ M + G + + Y
Sbjct: 382 GDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTY 441
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
N ++D ++G + A+ V ME K + T++ ++ C RL A+ LL L+
Sbjct: 442 NTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLE 501
Query: 371 SGV 373
G+
Sbjct: 502 RGL 504
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 165/327 (50%), Gaps = 3/327 (0%)
Query: 2 LIDAYCQFVSFDAGY---TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
LID YC+ Y IL M GI P+ VTYN LI G ++ +S ++ + EM
Sbjct: 196 LIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQ 255
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G+ P+V +YN L++ L GK DEA + M+ DL P T N+++NG CKN+ +
Sbjct: 256 RQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVN 315
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A+ +F ++K G P +TY LI CK GR+ A + + D G P TY ++
Sbjct: 316 EAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLI 375
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
R K +++ M K + D Y +I + K G ++A +++M G+
Sbjct: 376 AGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLN 435
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
V+YNTL++ YC+EG L AA ++ ME++G + + TH +LI G C G ++ A
Sbjct: 436 PSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGL 495
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDG 325
L M + G N Y I + + + G
Sbjct: 496 LNEMLERGLVPNRTTYEIIKEEMMEKG 522
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 190/409 (46%), Gaps = 12/409 (2%)
Query: 8 QFVSFDAGYTILNRMREAGISPDVVTYNSLIA-----GATRNSLLSCSLDLLDEMLEMGI 62
+FV ++ Y++ +S D NS++A RN + + + G
Sbjct: 57 KFVKYEKDYSVSAIFHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGF 116
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
+ S N L+ L + + + V+++MI + +FNI++NGLCK + A
Sbjct: 117 KLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGD 176
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGR---LRTARWILKELGDSGHAPNAITYTTIMK 179
+ ++ G P ++TYN LI G CK GR + A ILKE+ G PN +TY ++
Sbjct: 177 VIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILID 236
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
++ + + M+R+G + Y +I G++ EA +QMV+ ++
Sbjct: 237 GFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEP 296
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
++V++N LIN +CK + A L ++MEKQG + + T+T LID CK G ++ A
Sbjct: 297 NVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALY 356
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
M G + YNC++ L + G + A ++ M K D TY+ ++ +LCK
Sbjct: 357 NMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKK 416
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
A KLL + G+ ++DG G R A +++++
Sbjct: 417 GESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRME 465
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 151/309 (48%), Gaps = 36/309 (11%)
Query: 105 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 164
N +L+GL K + ++R + K ++++NI++ GLCK G+L A +++++
Sbjct: 124 NPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKV 183
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
G +PN ITY T++ GYC + +IG++ +
Sbjct: 184 WGVSPNVITYNTLID----------------------------GYCKM----GRIGKMYK 211
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A +++MV G+ + V+YN LI+ +CK+ + A + EM++QG + T+ ILI+
Sbjct: 212 ADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILIN 271
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 340
GLC G + A + M + N+ +N +++ K+ ++ AIN+F ME +
Sbjct: 272 GLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDP 331
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 400
++ TY++++ CK R+ A L + G+ S ++ GL G + A+ +
Sbjct: 332 NAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLM 391
Query: 401 SKIRMAKIS 409
+++ K+S
Sbjct: 392 NEMVSKKLS 400
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 193/406 (47%), Gaps = 16/406 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMRE-AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++D C+ + +L +M E + I P+VV Y+++I G ++ S + +L EM E
Sbjct: 219 IVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEK 278
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD+++YN ++ G+ EA R+ Q+M+ + P T++ ++N K R A
Sbjct: 279 GIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEA 338
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G +P +TYN +I G CK RL A + + G +P+ T+ T++
Sbjct: 339 EELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDG 398
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ G E+L M G D Y T+I F +G L A D +QM++ GV D
Sbjct: 399 YCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 458
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEK-----------QGFECDKYTHTILIDGLCKA 289
IV+ NTL++ C GKL+ A + M+K G E D T+ ILI GL
Sbjct: 459 IVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINE 518
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 345
G A + M G N Y+ +++ L K ++D A +F+SM K D T+
Sbjct: 519 GKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTF 578
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+++V CKA R+ +L + G+ ++ G R G
Sbjct: 579 NTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVG 624
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 190/401 (47%), Gaps = 9/401 (2%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D ++ +M I DV ++N LI S L +L ++ ++G PDV ++++L
Sbjct: 94 DLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTL 153
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+H L + EA +F M P TF ++NGLC+ A+ + + + G
Sbjct: 154 LHGLCVEDRVSEALDLFHQMC----RPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGL 209
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGL 191
P +TY ++ G+CK G +A +L+++ + H PN + Y+ I+ +++ ++
Sbjct: 210 QPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAH 269
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+ + M+ KG D F Y +I F GR EA +++M+ + ++V+Y+ LIN Y
Sbjct: 270 NLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAY 329
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
KE K A L DEM +G + T+ +IDG CK + A M G ++
Sbjct: 330 VKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDV 389
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
+N ++D +ID + M V D+ TY++++H C L +A L
Sbjct: 390 FTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQ 449
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+ SGV ++DGL +G ++A ++ ++ +K+
Sbjct: 450 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 490
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 193/453 (42%), Gaps = 90/453 (19%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C + ++ + G PDVVT+++L+ G +S +LDL +M
Sbjct: 117 ILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR- 175
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+V ++ +LM+ L + G+ EA + M+ L P T+ +++G+CK T +A
Sbjct: 176 ---PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSA 232
Query: 121 LRMFRG------------------------------------LQKHGFVPELVTYNILIK 144
L + R +Q+ G P+L TYN +I
Sbjct: 233 LNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMID 292
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
G C +GR A+ +L+E+ + PN +TY+ ++ + RK+ E+ M +G
Sbjct: 293 GFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIP 352
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ Y ++I F K RL A M T G D+ ++NTLI+ YC +++ LL
Sbjct: 353 NTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELL 412
Query: 265 DEMEKQGFECDKYTHTILI-----------------------------------DGLCKA 289
EM + G D T+ LI DGLC
Sbjct: 413 HEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 472
Query: 290 GNIKGARLHLEYMNKI-----------GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
G +K A + M K G + +++ YN ++ L +GK A +++ M
Sbjct: 473 GKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMP 532
Query: 339 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
V ++ TYSSM++ LCK RL A+++ S
Sbjct: 533 HRGIVPNTITYSSMINGLCKQSRLDEATQMFDS 565
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 150/310 (48%), Gaps = 11/310 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID +C+ DA + M G SPDV T+N+LI G + +LL EM E G
Sbjct: 360 MIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETG 419
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D +YN+L+H +G + A + Q MI + P T N +L+GLC N +AL
Sbjct: 420 LVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDAL 479
Query: 122 RMFRGLQK-----------HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
MF+ +QK +G P++ TYNILI GL G+ A + KE+ G PN
Sbjct: 480 EMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPN 539
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
ITY++++ + + ++ +M K ++ D + T+++ + K GR+ + +
Sbjct: 540 TITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFC 599
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+M G+ D ++Y TLI+ + K G + A + EM G D T ++ L
Sbjct: 600 EMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKE 659
Query: 291 NIKGARLHLE 300
+K A LE
Sbjct: 660 ELKRAVAMLE 669
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 141/278 (50%), Gaps = 11/278 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC D G +L+ M E G+ D TYN+LI G L+ +LDL +M+ G
Sbjct: 395 LIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSG 454
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-----------ICGDLTPCTATFNIMLNG 110
+ PD+ + N+L+ L GK +A +F+ M + P T+NI+++G
Sbjct: 455 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISG 514
Query: 111 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
L A +++ + G VP +TY+ +I GLCK RL A + +G +P+
Sbjct: 515 LINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPD 574
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
+T+ T++ + + GLE+ M R+G D Y T+I F K+G + A D +
Sbjct: 575 VVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQ 634
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
+M++ GV D ++ +++ + + +L+ A +L++++
Sbjct: 635 EMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQ 672
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 160/325 (49%), Gaps = 11/325 (3%)
Query: 47 LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA-TFN 105
L ++DL +M+ P V +N LM + ++ +PD ++Q M + PC +FN
Sbjct: 58 LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQI-PCDVYSFN 116
Query: 106 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
I++ C AL F + K GF P++VT++ L+ GLC R+ A + ++
Sbjct: 117 ILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMC-- 174
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
PN +T+TT+M R + + +L M G + Y T++ KIG A
Sbjct: 175 --RPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSA 232
Query: 226 TDYMEQMVT-DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
+ + +M ++ ++V Y+ +I+ K+G+ A+ L EM+++G D +T+ +ID
Sbjct: 233 LNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMID 292
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VK 340
G C +G A+ L+ M + + N+ Y+ +++ K+ K A +++ M +
Sbjct: 293 GFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIP 352
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLL 365
++ TY+SM+ CK RL +A +
Sbjct: 353 NTITYNSMIDGFCKQNRLDAAEHMF 377
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 144/310 (46%), Gaps = 9/310 (2%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
++A +F DM+ P FN ++ + + D + +++ +++ ++ ++NIL
Sbjct: 59 EDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNIL 118
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
IK C +L A ++ G P+ +T++T++ + L++ M R
Sbjct: 119 IKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCRPNV 178
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
+ T++ + GR+ EA +++MV DG+Q + ++Y T+++ CK G +A
Sbjct: 179 V----TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALN 234
Query: 263 LLDEMEKQG-FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
LL +ME+ + + ++ +IDGL K G A M + G +L YNC++D
Sbjct: 235 LLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGF 294
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
G+ A + + M + + TYS++++ K ++ A +L L G+
Sbjct: 295 CSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNT 354
Query: 378 SAQKAVVDGL 387
+++DG
Sbjct: 355 ITYNSMIDGF 364
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 94/197 (47%), Gaps = 2/197 (1%)
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ F +I L++A D MV ++ +N L+ + + + + L +ME++
Sbjct: 50 SGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIP 109
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
CD Y+ ILI C + A + K+GF ++ ++ ++ L + ++ A+++
Sbjct: 110 CDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDL 169
Query: 334 FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 393
F M + T++++++ LC+ R+ A LL ++ G++ + +VDG+ G
Sbjct: 170 FHQMCRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDT 229
Query: 394 REAKKIQSKIRMAKISH 410
A + K M ++SH
Sbjct: 230 VSALNLLRK--MEEMSH 244
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 197/390 (50%), Gaps = 6/390 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ T+ +M + G++P V+YNS+I G R L + + +ML+ G
Sbjct: 459 LLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCG 518
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V +Y+ LM F+ G + A VF M+ ++ P T+NI +NGLCK T A
Sbjct: 519 LKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQ 578
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + + GFVP +TYN ++ G K G + +A +E+ +SG +PN ITYTT++
Sbjct: 579 DMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGF 638
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N L L++ + M+ KG D Y +I F K ++ A+ +++ G+ +
Sbjct: 639 CKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNS 698
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V YN+LI+ Y +EAA L M +G CD T+T LIDGL K G + A
Sbjct: 699 VIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSE 758
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKAK 356
M+ G ++ Y +++ L G++++A + ME +DS T Y++++ KA
Sbjct: 759 MSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEME-RDSITPNVPIYNALIAGHFKAG 817
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
L A +L L G+ + +++G
Sbjct: 818 NLQEAFRLHNEMLDKGLTPNDTTYDILING 847
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 173/343 (50%), Gaps = 6/343 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D Y + + + + +RM + I P TYN I G + S + D+L + +E
Sbjct: 528 ILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEK 587
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +YNS+M + G A +++M ++P T+ ++NG CKN TD A
Sbjct: 588 GFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLA 647
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L+M ++ G ++ Y LI G CK + TA W+ EL D G +PN++ Y +++
Sbjct: 648 LKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLIS- 706
Query: 181 CFRN-RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+RN + L + M +G + D Y T+I +K GRL A D +M G+
Sbjct: 707 GYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIP 766
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLH 298
DI+ Y LIN C +G+LE A +L EME+ + + LI G KAGN++ A RLH
Sbjct: 767 DIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLH 826
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 341
E ++K G N Y+ +++ K G + A+ S++ KD
Sbjct: 827 NEMLDK-GLTPNDTTYDILINGKIKGG--NSALKSLLSLKFKD 866
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 184/380 (48%), Gaps = 8/380 (2%)
Query: 30 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANR 87
++ TYNSL++ + +S + L +ML+ G+ P SYNS++ HC + G D A
Sbjct: 452 NIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHC--RQGNLDMAAS 509
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
VF DM+ L P T++I+++G KN T+ A +F + VP TYNI I GLC
Sbjct: 510 VFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLC 569
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K GR A+ +LK+ + G P +TY +IM + L M G + +
Sbjct: 570 KVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVI 629
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y T+I F K A +M G++LDI +Y LI+ +CK+ +E A L E+
Sbjct: 630 TYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSEL 689
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
G + + LI G N++ A + M G +L+ Y ++D L K+G++
Sbjct: 690 LDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRL 749
Query: 328 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
A++++ M K D Y+ +++ LC +L +A K+L + + A+
Sbjct: 750 VLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNAL 809
Query: 384 VDGLRHSGCRREAKKIQSKI 403
+ G +G +EA ++ +++
Sbjct: 810 IAGHFKAGNLQEAFRLHNEM 829
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 192/434 (44%), Gaps = 40/434 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+++Y + + NR+ E+ I P + N L+ +N ++ + ++ ++M+ G
Sbjct: 180 LLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKG 239
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D ++ + +M + +EA + F + + A ++I++ CKN + A
Sbjct: 240 VHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELAC 299
Query: 122 RMFRGLQKHGFVPE-----------------------------------LVTYNILIKGL 146
+ + ++ G+VP +V L+KG
Sbjct: 300 GLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGY 359
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK +L +A ++ ++G +PN +TY +++ C +N ++ + MK K
Sbjct: 360 CKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTV 419
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
F ++I F+K+ +EA+ ++ V + +I +YN+L++ CKEGK+ A L +
Sbjct: 420 FIVNSLIRGFLKVESREEASKLFDEAVACDIA-NIFTYNSLLSWLCKEGKMSEATTLWQK 478
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M +G K ++ +I G C+ GN+ A M G N+ Y+ ++D K+G
Sbjct: 479 MLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGD 538
Query: 327 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
++A VF+ M V FTY+ ++ LCK R A +L ++ G + +
Sbjct: 539 TEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNS 598
Query: 383 VVDGLRHSGCRREA 396
++DG G A
Sbjct: 599 IMDGFIKEGSVSSA 612
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 172/399 (43%), Gaps = 9/399 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I A+C+ + + +L MR+ G P T+ S+I + + +L L DEM+
Sbjct: 284 IVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSC 343
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ +V +L+ + K A F M +P T+ +++ CKN A
Sbjct: 344 GVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKA 403
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ ++ P + N LI+G K A + E + N TY +++
Sbjct: 404 YDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDE-AVACDIANIFTYNSLLSW 462
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + M KG Y ++I + G L A M+ G++ +
Sbjct: 463 LCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPN 522
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++Y+ L++ Y K G E A+ + D M + +T+ I I+GLCK G A+ L+
Sbjct: 523 VITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLK 582
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAK 356
+ GF YN I+D K+G + A+ + ES + TY+++++ CK
Sbjct: 583 KFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNN 642
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
A K+ G+ + +A A++DG C+++
Sbjct: 643 NTDLALKMRNEMRNKGLELDIAAYGALIDGF----CKKQ 677
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 171/412 (41%), Gaps = 40/412 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ YC+ + ++M E G SP+ VTY LI +N ++ + DL +M
Sbjct: 355 LVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKN 414
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P V+ NSL+ ++ +EA+++F + + D
Sbjct: 415 ICPTVFIVNSLIRGFLKVESREEASKLFDEAVACD------------------------- 449
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + TYN L+ LCK G++ A + +++ D G AP ++Y +++
Sbjct: 450 -----------IANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGH 498
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + + S M G + Y ++ + K G + A ++MV + +
Sbjct: 499 CRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSD 558
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN IN CK G+ A +L + ++GF T+ ++DG K G++ A
Sbjct: 559 FTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYRE 618
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M + G N+ Y +++ K+ D A+ + M K D Y +++ CK +
Sbjct: 619 MCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQD 678
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+ +AS L L G+ +++ G R+ A +Q ++ IS
Sbjct: 679 IETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGIS 730
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 154/326 (47%), Gaps = 5/326 (1%)
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 124
D+ YN L++ + K ++A F ++ D+ P N +L L KN A ++
Sbjct: 173 DIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVY 232
Query: 125 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
+ G + T +I+++ K A+ E G +A Y+ +++ +N
Sbjct: 233 EKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKN 292
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
+L +L M+ KG+ + +VI A VK G + EA ++MV+ GVQ+++V
Sbjct: 293 LDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVA 352
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMN 303
TL+ YCK+ KL +A D+M + G ++ T+ +LI+ CK GN+ K L+ + N
Sbjct: 353 TTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKN 412
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDSFTYSSMVHNLCKAKRLPS 360
K + N ++ K + A +F+ ++ + FTY+S++ LCK ++
Sbjct: 413 K-NICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSE 471
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDG 386
A+ L L G+ K + +++ G
Sbjct: 472 ATTLWQKMLDKGLAPTKVSYNSMILG 497
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 115/378 (30%), Positives = 191/378 (50%), Gaps = 5/378 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ A C D +L MR AG+ DVVTY +LI G + + +++L+ EM E
Sbjct: 120 VLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCES 179
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+V Y+SL+ + G+ ++ +VF +M + P + +++ LCK A
Sbjct: 180 GIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKA 239
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + G P +VTYN+LI +CK G ++ A +LK++ + G AP+ +TY T++K
Sbjct: 240 HGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKG 299
Query: 181 CFRNRKYKLGLEILSAMKRKGYTF--DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ + +L M R + + +VI IGR+++A M G
Sbjct: 300 LSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCM 359
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+++V+YN LI + K+ A L+DEM G E D +T++ILI G CK + A
Sbjct: 360 VNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDL 419
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---DSFTYSSMVHNLCKA 355
L M G + L Y ++ + + G ++ A N+F M+ D YS+M+H CKA
Sbjct: 420 LSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKA 479
Query: 356 KRLPSASKLLLSCLKSGV 373
L +A +LL S + G+
Sbjct: 480 GDLKTAKELLKSIVDEGL 497
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 193/370 (52%), Gaps = 3/370 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID+ C+ + +++ M G+ P+VVTYN LI + + ++ +L +M E G
Sbjct: 226 LIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKG 285
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD--LTPCTATFNIMLNGLCKNRYTDN 119
+ PDV +YN+L+ L + + DEA + ++M+ G + P TFN ++ GLC
Sbjct: 286 VAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQ 345
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A ++ +++ G + LVTYN+LI GL + ++R A ++ E+ G P++ TY+ ++K
Sbjct: 346 AFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIK 405
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + ++LS M+ +G + F Y ++ A + G ++ A + +M + L
Sbjct: 406 GFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPL 464
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+V+Y+T+I+ CK G L+ A LL + +G D T++I+I+ K+G+++ A L
Sbjct: 465 DVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVL 524
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLP 359
+ M GF ++ ++ ++ G+I+ + + M K+ S ++ L +
Sbjct: 525 KQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVAS 584
Query: 360 SASKLLLSCL 369
+ K LL L
Sbjct: 585 NEGKALLQSL 594
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 165/353 (46%), Gaps = 44/353 (12%)
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPC---TATFNIMLNGLCKNRYTDNAL 121
D SYN+++ L + G D A + + M C ++ +++ LC +R D A+
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ R ++ G ++VTY LI+GLC A + A ++ E+ +SG PN + Y+++++
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ +++ ++ M KG D Y +I + K+G+ K+A M+ MV G++ ++
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN LIN CKEG ++ A +L +M ++G D T+ LI GL + A LE
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315
Query: 302 M---------NKIGFDS----------------------------NLEAYNCIVDRLGKD 324
M N + F+S NL YN ++ L +
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375
Query: 325 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
K+ A+ + + M DSFTYS ++ CK ++ A LL + G+
Sbjct: 376 HKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGI 428
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 140/279 (50%), Gaps = 11/279 (3%)
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA---PNAITYTTIMKCCFRNRKYKL 189
V + V+YN ++ LC+ G A +L+ + H PNA++YT +M+ +R
Sbjct: 74 VRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQ 133
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+ +L +M+ G D Y T+I + +A + M +M G++ ++V Y++L+
Sbjct: 134 AVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 193
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
YCK G+ E + EM ++G E D +T LID LCK G K A ++ M + G +
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
N+ YN +++ + K+G + AI V + M K D TY++++ L + A LL
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313
Query: 366 LSCLKSGVRILKS---AQKAVVDGLRHSGCRREAKKIQS 401
++ G I+K +V+ GL G R+A ++++
Sbjct: 314 EEMVR-GKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRA 351
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 183/341 (53%), Gaps = 3/341 (0%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + M+ G+ VV++N++I+G R L + L M E G+ PDV++Y +L+ L
Sbjct: 138 VFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLC 197
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
++G+ ++A VF+ M + P F I+++ CK + L + R +++ G P+ V
Sbjct: 198 RVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAV 257
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN ++ GLC+A L++A I+ E+ +G P+ +TYTT++ + + + +EI M
Sbjct: 258 TYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNM 317
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+G D Y +I+ K GR +A + +M+ G++ D +Y +I+ +C++G +
Sbjct: 318 VAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDV 377
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ LL EM+ +G + T+ ++++G CK G +K A + L M IG + YN +
Sbjct: 378 KTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNIL 437
Query: 318 VDRLGKDGKIDHAINVFESME--VKDSFTYSSMVHNLCKAK 356
+D K GK+ I +S + V D Y+S+V + K K
Sbjct: 438 LDGHCKHGKVTD-IEELKSAKGTVPDLGVYTSIVGEIVKKK 477
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 166/322 (51%), Gaps = 4/322 (1%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
++L+ G+PP+ +N LM L +LG+ A VF +M + +FN M++G+C+
Sbjct: 106 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 165
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D A + R + + G P++ TY LI+GLC+ GR+ AR + +++ G PNA+ +T
Sbjct: 166 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFT 225
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
++ + + LE+ M+ +G D Y ++ + LK A+ + +M +
Sbjct: 226 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSA 285
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G++ D V+Y TLI+ YCKE +L+ A + M +G D+ T+T LI GL KAG A
Sbjct: 286 GLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADA 345
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHN 351
L M + G + + Y ++D + G + + + + M+ K TY+ +++
Sbjct: 346 ERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNG 405
Query: 352 LCKAKRLPSASKLLLSCLKSGV 373
CK ++ +A LL + + GV
Sbjct: 406 FCKLGQMKNADMLLNAMINIGV 427
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 177/367 (48%), Gaps = 18/367 (4%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
+AG+ P+ +N L+ R L+ + ++ DEM G+ V S+N+++ + + G D
Sbjct: 109 DAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLD 168
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
A + + M +TP T+ ++ GLC+ ++A +F + G P V + ILI
Sbjct: 169 GAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILI 228
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
CK G T + +E+ + G P+A+TY I+ R R K I+ M+ G
Sbjct: 229 DAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLR 288
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I + K L A + + MV +GV LD V+Y LI+ K G+ A +
Sbjct: 289 PDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERV 348
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIK-GARLHLEYMNKIGFDSNLEAYNCIVD--- 319
L EM + G E D T+T++ID C+ G++K G RL E NK G + YN I++
Sbjct: 349 LGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNK-GRKPGVVTYNVIMNGFC 407
Query: 320 RLGKDGKIDHAINVFESMEV-KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
+LG+ D +N ++ V D TY+ ++ CK ++ + + LKS
Sbjct: 408 KLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKV------------TDIEELKS 455
Query: 379 AQKAVVD 385
A+ V D
Sbjct: 456 AKGTVPD 462
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 137/291 (47%), Gaps = 35/291 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATR------------------ 43
+I C+ D T+ RM EAG++PDV TY +LI G R
Sbjct: 157 MISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRG 216
Query: 44 ---NSLL--------------SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
N+++ L+L EM E G+ PD +YN++++ L + A+
Sbjct: 217 MKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSAS 276
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ +M L P T T+ +++G CK D A+ + + + G + VTY LI GL
Sbjct: 277 GIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGL 336
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
KAGR A +L E+ ++G P+ TYT ++ R K GL +L M+ KG
Sbjct: 337 SKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGV 396
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
Y ++ F K+G++K A + M+ GV D ++YN L++ +CK GK+
Sbjct: 397 VTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKV 447
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 119/269 (44%), Gaps = 31/269 (11%)
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G PE +N+L++ L + G L +A+ + E+ G +++ T++ R
Sbjct: 111 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA 170
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+ M G T D + Y +I ++GR+++A E+M G++ + V + LI+
Sbjct: 171 ETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDA 230
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+CK+G E L EM ++G D T+ +++GLC+A ++K A + M G
Sbjct: 231 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRP- 289
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
D+ TY++++ CK + L A ++ + +
Sbjct: 290 ------------------------------DTVTYTTLIDGYCKEEELDMAMEIKQNMVA 319
Query: 371 SGVRILKSAQKAVVDGLRHSGCRREAKKI 399
GV + + A++ GL +G +A+++
Sbjct: 320 EGVGLDEVTYTALISGLSKAGRSADAERV 348
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 115/378 (30%), Positives = 191/378 (50%), Gaps = 5/378 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ A C D +L MR AG+ DVVTY +LI G + + +++L+ EM E
Sbjct: 120 VLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCES 179
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+V Y+SL+ + G+ ++ +VF +M + P + +++ LCK A
Sbjct: 180 GIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKA 239
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + G P +VTYN+LI +CK G ++ A +LK++ + G AP+ +TY T++K
Sbjct: 240 HGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKG 299
Query: 181 CFRNRKYKLGLEILSAMKRKGYTF--DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ + +L M R + + +VI IGR+++A M G
Sbjct: 300 LSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCM 359
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+++V+YN LI + K+ A L+DEM G E D +T++ILI G CK + A
Sbjct: 360 VNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDL 419
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---DSFTYSSMVHNLCKA 355
L M G + L Y ++ + + G ++ A N+F M+ D YS+M+H CKA
Sbjct: 420 LSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKA 479
Query: 356 KRLPSASKLLLSCLKSGV 373
L +A +LL S + G+
Sbjct: 480 GDLKTAKELLKSIVDEGL 497
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 193/370 (52%), Gaps = 3/370 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID+ C+ + +++ M G+ P+VVTYN LI + + ++ +L +M E G
Sbjct: 226 LIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKG 285
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD--LTPCTATFNIMLNGLCKNRYTDN 119
+ PDV +YN+L+ L + + DEA + ++M+ G + P TFN ++ GLC
Sbjct: 286 VAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQ 345
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A ++ +++ G + LVTYN+LI GL + ++R A ++ E+ G P++ TY+ ++K
Sbjct: 346 AFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIK 405
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + ++LS M+ +G + F Y ++ A + G ++ A + +M + L
Sbjct: 406 GFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPL 464
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+V+Y+T+I+ CK G L+ A LL + +G D T++I+I+ K+G+++ A L
Sbjct: 465 DVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVL 524
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLP 359
+ M GF ++ ++ ++ G+I+ + + M K+ S ++ L +
Sbjct: 525 KQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVAS 584
Query: 360 SASKLLLSCL 369
+ K LL L
Sbjct: 585 NEGKALLQSL 594
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 165/354 (46%), Gaps = 44/354 (12%)
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPC---TATFNIMLNGLCKNRYTDNAL 121
D SYN+++ L + G D A + + M C ++ +++ LC +R D A+
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ R ++ G ++VTY LI+GLC A + A ++ E+ +SG PN + Y+++++
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ +++ ++ M KG D Y +I + K+G+ K+A M+ MV G++ ++
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN LIN CKEG ++ A +L +M ++G D T+ LI GL + A LE
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315
Query: 302 M---------NKIGFDS----------------------------NLEAYNCIVDRLGKD 324
M N + F+S NL YN ++ L +
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375
Query: 325 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
K+ A+ + + M DSFTYS ++ CK ++ A LL + G+
Sbjct: 376 HKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIE 429
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 140/279 (50%), Gaps = 11/279 (3%)
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA---PNAITYTTIMKCCFRNRKYKL 189
V + V+YN ++ LC+ G A +L+ + H PNA++YT +M+ +R
Sbjct: 74 VRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQ 133
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+ +L +M+ G D Y T+I + +A + M +M G++ ++V Y++L+
Sbjct: 134 AVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 193
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
YCK G+ E + EM ++G E D +T LID LCK G K A ++ M + G +
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
N+ YN +++ + K+G + AI V + M K D TY++++ L + A LL
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313
Query: 366 LSCLKSGVRILKS---AQKAVVDGLRHSGCRREAKKIQS 401
++ G I+K +V+ GL G R+A ++++
Sbjct: 314 EEMVR-GKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRA 351
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 189/357 (52%), Gaps = 8/357 (2%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
+++RM E G PDVVTYNS++ G R+ S +LDLL +M E + DV++Y++++
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 236
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK-NRYTDNALRMFRGLQKHGFV 133
L + G D A +F++M + T+N ++ GLCK ++ D AL + + + V
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL-LLKDMVSREIV 295
Query: 134 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLE 192
P ++T+N+L+ K G+L+ A + KE+ G +PN ITY T+M C +NR +
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN-N 354
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+L M R + D + ++I + + R+ + + G+ + V+Y+ L+ +C
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
+ GK++ A L EM G D T+ IL+DGLC G ++ A E + K D +
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
Y I++ + K GK++ A N+F S+ K + TY+ M+ LCK L A+ LL
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 206/407 (50%), Gaps = 4/407 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ +C+ Y++L ++ + G PD T+N+LI G +S ++ L+D M+E
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +YNS+++ + + G A + + M ++ T++ +++ LC++ D A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +F+ ++ G +VTYN L++GLCKAG+ +LK++ PN IT+ ++
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + E+ M +G + + Y T++ + RL EA + ++ MV + D
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV++ +LI YC +++ + + K+G + T++IL+ G C++G IK A +
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAK 356
M G ++ Y ++D L +GK++ A+ +FE ++ Y++++ +CK
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++ A L S GV+ ++ GL G EA + K+
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 169/337 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID+ C+ DA ++ M GI VVTYNSL+ G + + LL +M+
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V ++N L+ + GK EAN ++++MI ++P T+N +++G C A
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + ++ P++VT+ LIKG C R+ + + + G NA+TY+ +++
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ K KL E+ M G D Y ++ G+L++A + E + + L I
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V Y T+I CK GK+E A+ L + +G + + T+T++I GLCK G++ A + L
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
M + G N YN ++ +DG + + + E M+
Sbjct: 534 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 154/301 (51%), Gaps = 4/301 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D + + + M GISP+++TYN+L+ G + LS + ++LD M+
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PD+ ++ SL+ + + D+ +VF+++ L T++I++ G C++ A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ + HG +P+++TY IL+ GLC G+L A I ++L S + YTTI++
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + + ++ KG + Y +I+ K G L EA + +M DG +
Sbjct: 483 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 542
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+YNTLI + ++G L A+ L++EM+ GF D + ++ID L A RL L
Sbjct: 543 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK----RLTLR 598
Query: 301 Y 301
Y
Sbjct: 599 Y 599
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 190/407 (46%), Gaps = 18/407 (4%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D + M + P +V ++ + R + LD ++ GI ++++ N +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
++C + K A V ++ P T TFN ++ GL A+ + + ++G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P++VTYN ++ G+C++G A +L+++ + + TY+TI+ R+ +
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ M+ KG Y +++ K G+ + ++ MV+ + +++++N L++++
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM--NK-----I 305
KEGKL+ A L EM +G + T+ L+DG C + A L+ M NK +
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 361
F S ++ Y C+V R +D + VF ++ V ++ TYS +V C++ ++ A
Sbjct: 370 TFTSLIKGY-CMVKR------VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+L + GV ++DGL +G +A +I ++ +K+
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 139/289 (48%), Gaps = 4/289 (1%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K D+A +FQ+MI P F+ + + + + + L + L+ +G + T N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
I+I C+ + A +L ++ G+ P+ T+ T++K F K + ++ M
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G D Y +++ + G A D + +M V+ D+ +Y+T+I+ C++G ++AA
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
L EME +G + T+ L+ GLCKAG L L+ M N+ +N ++D
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
K+GK+ A +++ M + + TY++++ C RL A+ +L
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/161 (18%), Positives = 71/161 (44%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C + I ++++ + +V Y ++I G + + + +L +
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V +Y ++ L + G EAN + + M P T+N ++ ++ +
Sbjct: 503 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 562
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
++ ++ GF + + ++I L A + T R+ L +
Sbjct: 563 AKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSK 603
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 189/355 (53%), Gaps = 8/355 (2%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
+++RM E G PDVVTYNS++ G R+ S +LDLL +M E + DV++Y++++ L
Sbjct: 179 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 238
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK-NRYTDNALRMFRGLQKHGFVPE 135
+ G D A +F++M + T+N ++ GLCK ++ D AL + + + VP
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL-LLKDMVSREIVPN 297
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEIL 194
++T+N+L+ K G+L+ A + KE+ G +PN ITY T+M C +NR + +L
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN-NML 356
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
M R + D + ++I + + R+ + + G+ + V+Y+ L+ +C+
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
GK++ A L EM G D T+ IL+DGLC G ++ A E + K D + Y
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
I++ + K GK++ A N+F S+ K + TY+ M+ LCK L A+ LL
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 206/408 (50%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ +C+ Y++L ++ + G PD T+N+LI G +S ++ L+D M+E
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +YNS+++ + + G A + + M ++ T++ +++ LC++ D A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +F+ ++ G +VTYN L++GLCKAG+ +LK++ PN IT+ ++
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + E+ M +G + + Y T++ + RL EA + ++ MV + D
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV++ +LI YC +++ + + K+G + T++IL+ G C++G IK A +
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAK 356
M G ++ Y ++D L +GK++ A+ +FE ++ Y++++ +CK
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++ A L S GV+ ++ GL G EA + K+
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 169/337 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID+ C+ DA ++ M GI VVTYNSL+ G + + LL +M+
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V ++N L+ + GK EAN ++++MI ++P T+N +++G C A
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + ++ P++VT+ LIKG C R+ + + + G NA+TY+ +++
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ K KL E+ M G D Y ++ G+L++A + E + + L I
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V Y T+I CK GK+E A+ L + +G + + T+T++I GLCK G++ A + L
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
M + G N YN ++ +DG + + + E M+
Sbjct: 534 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 149/286 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D + + + M GISP+++TYN+L+ G + LS + ++LD M+
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PD+ ++ SL+ + + D+ +VF+++ L T++I++ G C++ A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ + HG +P+++TY IL+ GLC G+L A I ++L S + YTTI++
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + + ++ KG + Y +I+ K G L EA + +M DG +
Sbjct: 483 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 542
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+YNTLI + ++G L A+ L++EM+ GF D + ++ID L
Sbjct: 543 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 190/407 (46%), Gaps = 18/407 (4%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D + M + P +V ++ + R + LD ++ GI ++++ N +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
++C + K A V ++ P T TFN ++ GL A+ + + ++G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P++VTYN ++ G+C++G A +L+++ + + TY+TI+ R+ +
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ M+ KG Y +++ K G+ + ++ MV+ + +++++N L++++
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM--NK-----I 305
KEGKL+ A L EM +G + T+ L+DG C + A L+ M NK +
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 361
F S ++ Y C+V R +D + VF ++ V ++ TYS +V C++ ++ A
Sbjct: 370 TFTSLIKGY-CMVKR------VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+L + GV ++DGL +G +A +I ++ +K+
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 139/289 (48%), Gaps = 4/289 (1%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K D+A +FQ+MI P F+ + + + + + L + L+ +G + T N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
I+I C+ + A +L ++ G+ P+ T+ T++K F K + ++ M
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G D Y +++ + G A D + +M V+ D+ +Y+T+I+ C++G ++AA
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
L EME +G + T+ L+ GLCKAG L L+ M N+ +N ++D
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
K+GK+ A +++ M + + TY++++ C RL A+ +L
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 94/195 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +CQ + M G+ PDV+TY L+ G N L +L++ +++ +
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ + Y +++ + + GK ++A +F + C + P T+ +M++GLCK A
Sbjct: 468 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ R +++ G P TYN LI+ + G L + +++E+ G + +A + ++
Sbjct: 528 NILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDM 587
Query: 181 CFRNRKYKLGLEILS 195
K L++LS
Sbjct: 588 LLSGELDKSFLDMLS 602
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 189/356 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++ C+ D + +LN+M + + P V+ YN++I G + + +L+L EM
Sbjct: 21 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 80
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+V +Y+SL+ CL G+ +A+R+ DMI + P TF+ +++ K A
Sbjct: 81 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 140
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + K P +VTY+ LI G C RL A+ + + + P+ +TY T++K
Sbjct: 141 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 200
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ + G+E+ M ++G + Y +I + G A + ++MV+DGV +
Sbjct: 201 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 260
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++YNTL++ CK GKLE A ++ + +++ E YT+ I+I+G+CKAG ++
Sbjct: 261 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 320
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAK 356
++ G ++ AYN ++ + G + A +F+ M+ + S + L +A+
Sbjct: 321 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 376
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 178/356 (50%), Gaps = 4/356 (1%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 112
L+D M+ G PD+ +Y +++ L + G D A + M G L P +N +++GLC
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62
Query: 113 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
K ++ D+AL +F+ ++ G P +VTY+ LI LC GR A +L ++ + P+
Sbjct: 63 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
T++ ++ + K ++ M ++ Y ++I F RL EA E M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
V+ D+V+YNTLI +CK ++E + EM ++G + T+ ILI GL +AG+
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSM 348
A+ + M G N+ YN ++D L K+GK++ A+ VFE ++ +TY+ M
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ +CKA ++ L + GV+ A ++ G G + EA + +++
Sbjct: 303 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 358
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 168/337 (49%), Gaps = 2/337 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C++ D + M GI P+VVTY+SLI+ S + LL +M+E
Sbjct: 57 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 116
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV+++++L+ + GK EA +++ +M+ + P T++ ++NG C + D A
Sbjct: 117 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 176
Query: 122 RMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+MF + KH F P++VTYN LIKG CK R+ + +E+ G N +TY +++
Sbjct: 177 QMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 235
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+ + EI M G + Y T++ K G+L++A E + ++
Sbjct: 236 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 295
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I +YN +I CK GK+E + L + +G + D + +I G C+ G+ + A +
Sbjct: 296 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 355
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M + G N YN ++ +DG + + + + M
Sbjct: 356 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 392
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 168/330 (50%), Gaps = 1/330 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + + +L+ M E I+PDV T+++LI + L + L DEM++
Sbjct: 92 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 151
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P + +Y+SL++ + DEA ++F+ M+ P T+N ++ G CK + + +
Sbjct: 152 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 211
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + + G V VTYNILI+GL +AG A+ I KE+ G PN +TY T++
Sbjct: 212 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 271
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N K + + + ++R + Y +I K G++++ D + GV+ D+
Sbjct: 272 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 331
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNT+I+ +C++G E A L EM++ G + + LI + G+ + + ++
Sbjct: 332 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 391
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
M GF + + + L DG++D +
Sbjct: 392 MRSCGFAGDASTIGLVTNML-HDGRLDKSF 420
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 94/195 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI Q D I M G+ P+++TYN+L+ G +N L ++ + + +
Sbjct: 231 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 290
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P +++YN ++ + + GK ++ +F ++ + P +N M++G C+ + A
Sbjct: 291 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 350
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ +++ G +P YN LI+ + G + ++KE+ G A +A T +
Sbjct: 351 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 410
Query: 181 CFRNRKYKLGLEILS 195
R K L++LS
Sbjct: 411 LHDGRLDKSFLDMLS 425
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 6/180 (3%)
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+ ++ M KG D Y V+ K G A + + +M ++ ++ YNT+I+
Sbjct: 1 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
CK ++ A L EME +G + T++ LI LC G A L M + + +
Sbjct: 61 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLL 365
+ ++ ++D K+GK+ A +++ M VK S TYSS+++ C RL A ++
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEM-VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 179
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 197/407 (48%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ + FD ++ +M+ GISP + T N ++ R+S + L +M+++G
Sbjct: 88 LLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLG 147
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ ++ SL+H + ++A +F ++ P T+ +++ LCKNR+ ++A+
Sbjct: 148 FEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAV 207
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + +G P +VTYN L+ GLC+ GR A W+L+++ G PN IT+T ++
Sbjct: 208 EIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAF 267
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K E+ M + D F Y +I GRL EA M ++G +
Sbjct: 268 VKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNE 327
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y TLI+ +CK ++E + EM ++G + T+T+LI G C G A+
Sbjct: 328 VTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQ 387
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKR 357
M ++ YN ++D L +G ++ A+ +F+ M ++ TY+ ++ +CK +
Sbjct: 388 MGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGK 447
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A L S G++ ++ G G EA + K++
Sbjct: 448 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMK 494
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 156/310 (50%), Gaps = 2/310 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + I N+M + GI P+VVTYNSL++G S + LL +M++ G
Sbjct: 193 LIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRG 252
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V ++ +L+ ++GK EA +++ MI + P T+ ++NGLC D A
Sbjct: 253 IQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEAR 312
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-C 180
+MF ++ +G+ P VTY LI G CK+ R+ I E+ G N ITYT +++
Sbjct: 313 QMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGY 372
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C R + E+ + M + D Y ++ G +++A + M + ++
Sbjct: 373 CLVGRP-DVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDIN 431
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+Y +I CK GK+E A+ L + +G + + T+T +I G C+ G I A +
Sbjct: 432 IVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFK 491
Query: 301 YMNKIGFDSN 310
M + GF N
Sbjct: 492 KMKEDGFLPN 501
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 156/336 (46%), Gaps = 4/336 (1%)
Query: 34 YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
Y ++ N + +LDL M+ P + + L+ + ++ + D +F+ M
Sbjct: 50 YRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQ 109
Query: 94 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 153
++P T NI++N +C++ A + K GF P+LVT+ L+ G C R+
Sbjct: 110 ILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIE 169
Query: 154 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
A + ++ G PN +TYTT++ C +NR +EI + M G + Y +++
Sbjct: 170 DALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLV 229
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ +IGR +A + M+ G+Q +++++ LI+ + K GK+ A L M +
Sbjct: 230 SGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVY 289
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
D +T+T LI+GLC G + AR M G+ N Y ++ K +++ +
Sbjct: 290 PDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKI 349
Query: 334 FESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
F M V ++ TY+ ++ C R A ++
Sbjct: 350 FYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVF 385
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 66/134 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI YC D + N+M PD+ TYN L+ G N + +L + M +
Sbjct: 367 VLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKR 426
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ ++ +Y ++ + ++GK ++A +F + + P T+ M++G C+ + A
Sbjct: 427 EMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEA 486
Query: 121 LRMFRGLQKHGFVP 134
+F+ +++ GF+P
Sbjct: 487 DALFKKMKEDGFLP 500
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 190/377 (50%), Gaps = 10/377 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ D Y +L R+ E +VV N++I G L+ + +L + M G
Sbjct: 291 LLRGLCRTRQADEAYAMLGRVPEV----NVVMLNTVIRGCLAEGKLARATELYEMMGSKG 346
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PPDV +YN LMH L +LG+ A R+ +M P T++ +L+ C+N D+A
Sbjct: 347 CPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDAR 406
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + GF YN +I L K G+L A +++E+ G P+ TY TI+
Sbjct: 407 AMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHL 466
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N + I + +G +G Y T+I A + GR +E +MV G LD+
Sbjct: 467 CNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDV 526
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLE 300
VSYN LI CKEG ++ + +LL+EM +G + + +++ +LI+ LCKAG ++ A L E
Sbjct: 527 VSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKE 586
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
+N+ G ++ YN +++ L K G A+N+ E + + D TY+ ++ CK +
Sbjct: 587 MLNQ-GLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVR 645
Query: 357 RLPSASKLLLSCLKSGV 373
L AS LL + G+
Sbjct: 646 LLDDASMLLDKAVSGGI 662
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 204/435 (46%), Gaps = 37/435 (8%)
Query: 5 AYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP 64
A C+ +L M G PD V Y ++I ++ + LLDEML MG
Sbjct: 189 ALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAA 248
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 124
DV ++N ++ L LG EA R+ M+ TP T+ +L GLC+ R D A M
Sbjct: 249 DVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAML 308
Query: 125 ---------------RG----------------LQKHGFVPELVTYNILIKGLCKAGRLR 153
RG + G P++ TYNIL+ GLCK GR
Sbjct: 309 GRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCG 368
Query: 154 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
+A +L E+ + G APN +TY+T++ RN + +L M KG++ + GY +I
Sbjct: 369 SAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGII 428
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
A K G+L EA +++M + G + DI +YNT+I C +++ A + + ++G
Sbjct: 429 YALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVV 488
Query: 274 CDKYTHTILIDGLCKAGNIK-GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
+ T+ LI L +G + G RL E M G ++ +YN ++ L K+G +D ++
Sbjct: 489 ANGITYNTLIHALLHSGRWQEGLRLANE-MVLHGCPLDVVSYNGLIKALCKEGNVDRSMM 547
Query: 333 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
+ E M K ++F+Y+ +++ LCKA ++ A +L L G+ +++GL
Sbjct: 548 LLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLC 607
Query: 389 HSGCRREAKKIQSKI 403
G A + K+
Sbjct: 608 KVGWTHAALNLLEKL 622
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 185/394 (46%), Gaps = 44/394 (11%)
Query: 50 SLDLLDEMLE-MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 108
+L LLD+M + P SYN+++ L + +A +++ M+ + P T TF +
Sbjct: 128 ALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 187
Query: 109 NGLCKNRYTDNALRMFRGLQKHGFVPELV------------------------------- 137
LC+ +AL + RG+ +HG VP+ V
Sbjct: 188 RALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCA 247
Query: 138 ----TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 193
T+N ++ GLC G +R A ++ + G P+ +TY +++ R R+ +
Sbjct: 248 ADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAM 307
Query: 194 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 253
L + TVI + G+L AT+ E M + G D+ +YN L++ CK
Sbjct: 308 LGRVPEVNVVM----LNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCK 363
Query: 254 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
G+ +A +LDEME++G + T++ L+ C+ G AR L+ M+ GF N +
Sbjct: 364 LGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQG 423
Query: 314 YNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 369
YN I+ LGKDGK+D A+ + + M+ + D TY++++++LC ++ A + + L
Sbjct: 424 YNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLL 483
Query: 370 KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ GV ++ L HSG +E ++ +++
Sbjct: 484 EEGVVANGITYNTLIHALLHSGRWQEGLRLANEM 517
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 155/318 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C+ + +L+ M E G +P++VTY++L+ RN + + +LD+M
Sbjct: 356 ILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAK 415
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G + YN +++ L + GK DEA R+ Q+M P T+N ++ LC N D A
Sbjct: 416 GFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEA 475
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F L + G V +TYN LI L +GR + + E+ G + ++Y ++K
Sbjct: 476 EHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKA 535
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + +L M KG + F Y +I K G++++A + ++M+ G+ D
Sbjct: 536 LCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPD 595
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+YNTLIN CK G AA LL+++ + D T+ ILI CK + A + L+
Sbjct: 596 IVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLD 655
Query: 301 YMNKIGFDSNLEAYNCIV 318
G N + +V
Sbjct: 656 KAVSGGIVPNERTWGMMV 673
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 134/312 (42%), Gaps = 8/312 (2%)
Query: 97 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 156
+TP ++N +L+ L + +AL ++R + + P T+ + + LC+ GR R A
Sbjct: 141 VTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDAL 200
Query: 157 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 216
+L+ + G P+A+ Y T++ +L M G D + V+
Sbjct: 201 ALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGL 260
Query: 217 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
+G ++EA +++M+ G +V+Y L+ C+ + + AY +L + E +
Sbjct: 261 CGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVP----EVNV 316
Query: 277 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
+I G G + A E M G ++ YN ++ L K G+ A+ + +
Sbjct: 317 VMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDE 376
Query: 337 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 392
ME K + TYS+++H+ C+ A +L G + ++ L G
Sbjct: 377 MEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGK 436
Query: 393 RREAKKIQSKIR 404
EA ++ +++
Sbjct: 437 LDEAMRLVQEMK 448
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLI+ C+ + M G++PD+VTYN+LI G + +L+LL+++
Sbjct: 566 MLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNE 625
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+ PD+ +YN L+ HC +L D+A+ + + G + P T+ +M+ +
Sbjct: 626 NVHPDIVTYNILISWHCKVRLL--DDASMLLDKAVSGGIVPNERTWGMMVQNFVRQ 679
>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g04760, chloroplastic-like [Glycine max]
Length = 531
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 212/408 (51%), Gaps = 11/408 (2%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
S Y +L+RM+ G SPD+VTYN LI +L +L+ +++L+ P V +Y
Sbjct: 104 SIPHAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYT 163
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
L+ G DEA ++ +M +L P +N ++ +C+ Y D A + +
Sbjct: 164 ILIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSIIX-MCREGYVDRAFEVISSISSK 222
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G+ +++TYNIL++ L G+ ++ ++ G N +TY+ ++ R+ K + G
Sbjct: 223 GYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEG 282
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+ +L MK+KG DG+ Y +IA K GR+ A + ++ M++DG DIV+YNT++
Sbjct: 283 VGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILAC 342
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHLEYMNKIGFDS 309
CK+ + + A + +++ + G + ++ + L +G+ ++ + LE ++ + D
Sbjct: 343 LCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGMILEMLDXV--DP 400
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS------FTYSSMVHNLCKAKRLPSASK 363
++ AYN ++ L +DG +D AI + ME++ S +Y+ ++ LC+ R+ A++
Sbjct: 401 DVIAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATE 460
Query: 364 LLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK-IRMAKISH 410
+L + + G ++ +++G+ G +A+ + + + M IS
Sbjct: 461 VLAAMVDKGCLPNETTYTFLIEGIGFGGWLNDARDLATTLVNMDAISE 508
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 170/359 (47%), Gaps = 7/359 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+A D +L+ M E + PDV YNS+I R + + +++ +
Sbjct: 164 ILIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSIIX-MCREGYVDRAFEVISSISSK 222
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G DV +YN L+ L GK + + DM+ T++++++ LC++ +
Sbjct: 223 GYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEG 282
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + ++K G P+ Y+ LI LCK GR+ A +L + G P+ + Y TI+ C
Sbjct: 283 VGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILAC 342
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ L I + G + + Y TV +A G A + +M+ D V D
Sbjct: 343 LCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGMILEML-DXVDPD 401
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK--YTHTILIDGLCKAGNIKGARLH 298
+++YN+LI+ C++G ++ A LL +ME + EC ++ I++ GLC+ G + A
Sbjct: 402 VIAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATEV 461
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV---FESMEVKDSFTYSSMVHNLCK 354
L M G N Y +++ +G G ++ A ++ +M+ ++ + CK
Sbjct: 462 LAAMVDKGCLPNETTYTFLIEGIGFGGWLNDARDLATTLVNMDAISEHSFERLYKTFCK 520
>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 198/410 (48%), Gaps = 12/410 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ YC+ S + I+ M++ + PD+ TYN LI G + L+L+D M +
Sbjct: 281 LVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLK 340
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +YN+L+ F+LG EA ++ + M + T NI L LCK +
Sbjct: 341 LQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVT 400
Query: 122 RMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R + L HGF P++VTY+ LIK K G L A +++E+G G N IT TI+
Sbjct: 401 RKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDA 460
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ RK +L++ ++G+ D Y T+I F + ++++A + ++M +
Sbjct: 461 LCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPT 520
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ ++N+LI C GK E A DE+ + G D T +I G CK G ++ A E
Sbjct: 521 VSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKA---FE 577
Query: 301 YMN---KIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLC 353
+ N K F + N +++ L K+G + A+N F E EV D+ TY++M+ C
Sbjct: 578 FYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFC 636
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
K K+L A LL + G+ + + + L G E ++ K
Sbjct: 637 KDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF 686
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 202/432 (46%), Gaps = 41/432 (9%)
Query: 6 YCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-EMGIPP 64
Y S + + + M + G+S +V T+N L+ G L +L +L+ M+ E + P
Sbjct: 179 YPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNP 238
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 124
D +YN+++ + + G+ + + DM L P T+N ++ G CK A ++
Sbjct: 239 DNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV 298
Query: 125 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF-- 182
+++ +P+L TYNILI GLC AG +R ++ + P+ +TY T++ CF
Sbjct: 299 ELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFEL 358
Query: 183 ----RNRK----------------YKLGLEIL------SAMKRK--------GYTFDGFG 208
RK + + L+ L A+ RK G++ D
Sbjct: 359 GLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVT 418
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y T+I A++K+G L A + M +M G++++ ++ NT+++ CKE KL+ A+ LL+
Sbjct: 419 YHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAH 478
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
K+GF D+ T+ LI G + ++ A + M K+ + +N ++ L GK +
Sbjct: 479 KRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTE 538
Query: 329 HAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 384
A+ F ES + D T++S++ CK R+ A + +K + ++
Sbjct: 539 LAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILL 598
Query: 385 DGLRHSGCRREA 396
+GL G +A
Sbjct: 599 NGLCKEGMTEKA 610
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 190/398 (47%), Gaps = 9/398 (2%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATR---NSLLSCSLDLLDEMLE 59
+ AY I +M + P+++T N+L+ G R + +S + ++ D+M++
Sbjct: 138 LSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVK 197
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG-DLTPCTATFNIMLNGLCKNRYTD 118
+G+ +V ++N L++ GK ++A + + M+ + P T+N +L + K
Sbjct: 198 IGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLS 257
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
+ + ++K+G VP VTYN L+ G CK G L+ A I++ + + P+ TY ++
Sbjct: 258 DLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILI 317
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ GLE++ AMK D Y T+I ++G EA MEQM DGV+
Sbjct: 318 NGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVK 377
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+ V++N + CKE K EA + E+ + GF D T+ LI K G++ GA
Sbjct: 378 ANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALE 437
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 353
+ M + G N N I+D L K+ K+D A N+ S + D TY +++
Sbjct: 438 MMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFF 497
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ +++ A ++ K + S +++ GL H G
Sbjct: 498 REEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHG 535
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 111/246 (45%), Gaps = 24/246 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + + + + + M++ I+P V T+NSLI G + +++ DE+ E G
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESG 551
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD ++NS++ + G+ ++A + + I P T NI+LNGLCK T+ AL
Sbjct: 552 LLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F L + V + VTYN +I CK +L+ A +L E+ + G P+ TY + +
Sbjct: 612 NFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLL 670
Query: 182 FRNRKYKLGLEILS-------AMKR----------------KGYTFDGFGYCTVIAAFVK 218
+ K E+L +MKR + + Y VI
Sbjct: 671 MEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCS 730
Query: 219 IGRLKE 224
GRLKE
Sbjct: 731 RGRLKE 736
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK---AGNIKGARLHLE 300
++ ++ Y EGK A + +M + + + T L+ GL + + +I AR +
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFD 193
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM--EVK---DSFTYSSMVHNLCKA 355
M KIG N++ +N +V+ +GK++ A+ + E M E K D+ TY++++ + K
Sbjct: 194 DMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKK 253
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
RL +LLL K+G+ + +V G G +EA +I ++ +
Sbjct: 254 GRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNV 306
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 183/341 (53%), Gaps = 3/341 (0%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + M+ G+ VV++N++I+G R L + L M E G+ PDV++Y +L+ L
Sbjct: 262 VFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLC 321
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
++G+ ++A VF+ M + P F I+++ CK + L + R +++ G P+ V
Sbjct: 322 RVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAV 381
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN ++ GLC+A L++A I+ E+ +G P+ +TYTT++ + + + +EI M
Sbjct: 382 TYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNM 441
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+G D Y +I+ K GR +A + +M+ G++ D +Y +I+ +C++G +
Sbjct: 442 VAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDV 501
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ LL EM+ +G + T+ ++++G CK G +K A + L M IG + YN +
Sbjct: 502 KTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNIL 561
Query: 318 VDRLGKDGKIDHAINVFESME--VKDSFTYSSMVHNLCKAK 356
+D K GK+ I +S + V D Y+S+V + K K
Sbjct: 562 LDGHCKHGKVTD-IEELKSAKGTVPDLGVYTSIVGEIVKKK 601
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 166/322 (51%), Gaps = 4/322 (1%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
++L+ G+PP+ +N LM L +LG+ A VF +M + +FN M++G+C+
Sbjct: 230 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 289
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D A + R + + G P++ TY LI+GLC+ GR+ AR + +++ G PNA+ +T
Sbjct: 290 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFT 349
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
++ + + LE+ M+ +G D Y ++ + LK A+ + +M +
Sbjct: 350 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSA 409
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G++ D V+Y TLI+ YCKE +L+ A + M +G D+ T+T LI GL KAG A
Sbjct: 410 GLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADA 469
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHN 351
L M + G + + Y ++D + G + + + + M+ K TY+ +++
Sbjct: 470 ERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNG 529
Query: 352 LCKAKRLPSASKLLLSCLKSGV 373
CK ++ +A LL + + GV
Sbjct: 530 FCKLGQMKNADMLLNAMINIGV 551
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 177/367 (48%), Gaps = 18/367 (4%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
+AG+ P+ +N L+ R L+ + ++ DEM G+ V S+N+++ + + G D
Sbjct: 233 DAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLD 292
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
A + + M +TP T+ ++ GLC+ ++A +F + G P V + ILI
Sbjct: 293 GAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILI 352
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
CK G T + +E+ + G P+A+TY I+ R R K I+ M+ G
Sbjct: 353 DAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLR 412
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I + K L A + + MV +GV LD V+Y LI+ K G+ A +
Sbjct: 413 PDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERV 472
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIK-GARLHLEYMNKIGFDSNLEAYNCIVD--- 319
L EM + G E D T+T++ID C+ G++K G RL E NK G + YN I++
Sbjct: 473 LGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNK-GRKPGVVTYNVIMNGFC 531
Query: 320 RLGKDGKIDHAINVFESMEV-KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
+LG+ D +N ++ V D TY+ ++ CK ++ + + LKS
Sbjct: 532 KLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKV------------TDIEELKS 579
Query: 379 AQKAVVD 385
A+ V D
Sbjct: 580 AKGTVPD 586
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 137/291 (47%), Gaps = 35/291 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATR------------------ 43
+I C+ D T+ RM EAG++PDV TY +LI G R
Sbjct: 281 MISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRG 340
Query: 44 ---NSLL--------------SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
N+++ L+L EM E G+ PD +YN++++ L + A+
Sbjct: 341 MKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSAS 400
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ +M L P T T+ +++G CK D A+ + + + G + VTY LI GL
Sbjct: 401 GIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGL 460
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
KAGR A +L E+ ++G P+ TYT ++ R K GL +L M+ KG
Sbjct: 461 SKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGV 520
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
Y ++ F K+G++K A + M+ GV D ++YN L++ +CK GK+
Sbjct: 521 VTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKV 571
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 119/269 (44%), Gaps = 31/269 (11%)
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G PE +N+L++ L + G L +A+ + E+ G +++ T++ R
Sbjct: 235 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA 294
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+ M G T D + Y +I ++GR+++A E+M G++ + V + LI+
Sbjct: 295 ETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDA 354
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+CK+G E L EM ++G D T+ +++GLC+A ++K A + M G
Sbjct: 355 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRP- 413
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
D+ TY++++ CK + L A ++ + +
Sbjct: 414 ------------------------------DTVTYTTLIDGYCKEEELDMAMEIKQNMVA 443
Query: 371 SGVRILKSAQKAVVDGLRHSGCRREAKKI 399
GV + + A++ GL +G +A+++
Sbjct: 444 EGVGLDEVTYTALISGLSKAGRSADAERV 472
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 194/377 (51%), Gaps = 4/377 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ YC+ + +++ +AG+ PD TY SLI G RN + + ++ M + G
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ SY +L+H L + G+ +EA ++F DM + P T+ +++ L + AL
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL 319
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++ G P + TY +LI GLCK ++ AR +L E+ + G P+ +TY ++
Sbjct: 320 NLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGY 379
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ EIL M+ + Y +I K ++ +A + +M+ + +
Sbjct: 380 CKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSL 439
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN+LI+ CK LE+AY LL M + G D++T+++ ID LCK G ++ A +
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G +N Y ++D K GKID A ++ E M + +S+TY+ ++ LCK K+
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559
Query: 358 LPSASKLLLSCLKSGVR 374
+ AS L+ L GV+
Sbjct: 560 MKEASSLVAKMLTMGVK 576
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 170/353 (48%), Gaps = 4/353 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + + M E P V TY LI + + +L+L +EM E G
Sbjct: 270 LIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKG 329
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +Y L+ L + K DEA ++ +M L P T+N +++G CK D+A
Sbjct: 330 CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAF 389
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++ + P TYN LI GLCK ++ A +L ++ + +P+ ITY +++
Sbjct: 390 EILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQ 449
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + +LS M G D + Y I K GR++EA + + GV+ +
Sbjct: 450 CKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANE 509
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V Y LI+ YCK GK++ AY LL+ M + YT+ +LI+GLCK +K A +
Sbjct: 510 VIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAK 569
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVH 350
M +G + Y ++ + KDG DHA+ VF M D TY++ +H
Sbjct: 570 MLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLH 622
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 176/372 (47%), Gaps = 4/372 (1%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
+N E P + YN+++ ++ L+ + E+L I P+++++N++++ +
Sbjct: 147 MNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCK 206
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
+G EA ++ L P T T+ ++ G C+N+ DNA +F + + G V+
Sbjct: 207 IGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVS 266
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
Y LI GLC+AGR+ A + ++ + P TYT ++ + + L + + MK
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMK 326
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
KG + Y +I K ++ EA + +M G+ +V+YN LI+ YCKEG ++
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMID 386
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A+ +LD ME + T+ LI GLCK + A L M + +L YN ++
Sbjct: 387 DAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLI 446
Query: 319 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
K ++ A + M V D +TYS + LCK R+ A L S GV+
Sbjct: 447 HGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVK 506
Query: 375 ILKSAQKAVVDG 386
+ A++DG
Sbjct: 507 ANEVIYTALIDG 518
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 186/420 (44%), Gaps = 22/420 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ D + IL+ M P+ TYN LI G + + ++ LL++MLE
Sbjct: 375 LIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERK 434
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P + +YNSL+H ++ + A R+ M L P T+++ ++ LCK + A
Sbjct: 435 LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAG 494
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ G V Y LI G CK G++ A +L+ + + PN+ TY +++
Sbjct: 495 TLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGL 554
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +K K +++ M G Y +I +K G A MV+ G Q D+
Sbjct: 555 CKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDV 614
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y ++ Y +G LE ++ +M ++G D T+T+LIDG + G A L+
Sbjct: 615 CTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKC 674
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDH------------------AINVFESME----V 339
M G +L + ++ L + ++ A+ +FE M
Sbjct: 675 MVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCT 734
Query: 340 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D Y +++ C+ +RL A L+ + G+ + +++D G EA ++
Sbjct: 735 IDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRL 794
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 191/420 (45%), Gaps = 22/420 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ +LN+M E +SP ++TYNSLI G + + L + LL M E G
Sbjct: 410 LICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENG 469
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD W+Y+ + L + G+ +EA +F + + + +++G CK D A
Sbjct: 470 LVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAY 529
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +P TYN+LI+GLCK +++ A ++ ++ G P +TYT ++
Sbjct: 530 SLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEM 589
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + L++ + M GY D Y + A+ G L+E D + +M +G+ D+
Sbjct: 590 LKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDL 649
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH--- 298
V+Y LI+ Y + G A+ L M G + Y +ILI L +K R
Sbjct: 650 VTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGI 709
Query: 299 ------LEY---------MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
LEY M + G ++ Y ++ + +++ A + M+ +
Sbjct: 710 DSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMS 769
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
Y+S++ CK A +L+ + +++G+ L + K +V GL G +AK +
Sbjct: 770 PSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAV 829
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 161/337 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ D +L+ M E G+ P VVTYN+LI G + ++ + ++LD M
Sbjct: 339 VLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESN 398
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+ +YN L+ L + K +A + M+ L+P T+N +++G CK ++A
Sbjct: 399 SCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESA 458
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+ + ++G VP+ TY++ I LCK GR+ A + + G N + YT ++
Sbjct: 459 YRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDG 518
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + +L M + + Y +I K ++KEA+ + +M+T GV+
Sbjct: 519 YCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPT 578
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+Y LI K+G + A + + M G++ D T+T + G ++ +
Sbjct: 579 VVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIA 638
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
MN+ G +L Y ++D + G A + + M
Sbjct: 639 KMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCM 675
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 153/350 (43%), Gaps = 4/350 (1%)
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
E P + YN+++ L + DE V+ +++ ++P TFN M+NG CK
Sbjct: 152 EFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVV 211
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A + + G P+ TY LI G C+ + A + + G N ++YT ++
Sbjct: 212 EAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLI 271
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ L++ + M Y +I A GR EA + +M G +
Sbjct: 272 HGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCE 331
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
++ +Y LI+ CKE K++ A +L EM ++G T+ LIDG CK G I A
Sbjct: 332 PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEI 391
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EVKDS---FTYSSMVHNLCK 354
L+ M N YN ++ L K K+ A+ + M E K S TY+S++H CK
Sbjct: 392 LDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCK 451
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
L SA +LL ++G+ + +D L G EA + ++
Sbjct: 452 VNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK 501
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 160/356 (44%), Gaps = 21/356 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ +++ +M G+ P VVTY LI ++ +L + + M+ +
Sbjct: 549 VLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSL 608
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +Y + +H F G +E + V M + P T+ ++++G + T A
Sbjct: 609 GYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRA 668
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P L +ILIK L R++ R E+G ++++ T
Sbjct: 669 FDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETR---SEIG-----IDSVSNTL---- 716
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+Y++ L++ M G T D Y +IA F + RL+EA + M G+
Sbjct: 717 -----EYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPS 771
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
YN+L++ CK G A L+D M + G ++ +L+ GL G+ + A+
Sbjct: 772 EDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFH 831
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
+ G++ + A+ ++D L K +D + + ME K + TYS ++ L
Sbjct: 832 GLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 194/377 (51%), Gaps = 4/377 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ YC+ + +++ +AG+ PD TY SLI G RN + + ++ M + G
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ SY +L+H L + G+ +EA ++F DM + P T+ +++ L + AL
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL 319
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++ G P + TY +LI GLCK ++ AR +L E+ + G P+ +TY ++
Sbjct: 320 NLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGY 379
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ EIL M+ + Y +I K ++ +A + +M+ + +
Sbjct: 380 CKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSL 439
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN+LI+ CK LE+AY LL M + G D++T+++ ID LCK G ++ A +
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G +N Y ++D K GKID A ++ E M + +S+TY+ ++ LCK K+
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559
Query: 358 LPSASKLLLSCLKSGVR 374
+ AS L+ L GV+
Sbjct: 560 MKEASSLVAKMLTMGVK 576
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 170/353 (48%), Gaps = 4/353 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + + M E P V TY LI + + +L+L +EM E G
Sbjct: 270 LIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKG 329
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +Y L+ L + K DEA ++ +M L P T+N +++G CK D+A
Sbjct: 330 CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAF 389
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++ + P TYN LI GLCK ++ A +L ++ + +P+ ITY +++
Sbjct: 390 EILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQ 449
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + +LS M G D + Y I K GR++EA + + GV+ +
Sbjct: 450 CKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANE 509
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V Y LI+ YCK GK++ AY LL+ M + YT+ +LI+GLCK +K A +
Sbjct: 510 VIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAK 569
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVH 350
M +G + Y ++ + KDG DHA+ VF M D TY++ +H
Sbjct: 570 MLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLH 622
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 173/368 (47%), Gaps = 10/368 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ +LN+M E +SP ++TYNSLI G + + L + LL M E G
Sbjct: 410 LICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENG 469
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD W+Y+ + L + G+ +EA +F + + + +++G CK D A
Sbjct: 470 LVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAY 529
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +P TYN+LI+GLCK +++ A ++ ++ G P +TYT ++
Sbjct: 530 SLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEM 589
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + L++ + M GY D Y + A+ G L+E D + +M +G+ D+
Sbjct: 590 LKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDL 649
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y LI+ Y + G A+ L M G + Y +ILI L +K R
Sbjct: 650 VTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETR----- 704
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
++IG DS + + + K + + A+ +FE M D Y +++ C+ +R
Sbjct: 705 -SEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQER 763
Query: 358 LPSASKLL 365
L A L+
Sbjct: 764 LEEAQGLV 771
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 176/372 (47%), Gaps = 4/372 (1%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
+N E P + YN+++ ++ L+ + E+L I P+++++N++++ +
Sbjct: 147 MNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCK 206
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
+G EA ++ L P T T+ ++ G C+N+ DNA +F + + G V+
Sbjct: 207 IGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVS 266
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
Y LI GLC+AGR+ A + ++ + P TYT ++ + + L + + MK
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMK 326
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
KG + Y +I K ++ EA + +M G+ +V+YN LI+ YCKEG ++
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMID 386
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A+ +LD ME + T+ LI GLCK + A L M + +L YN ++
Sbjct: 387 DAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLI 446
Query: 319 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
K ++ A + M V D +TYS + LCK R+ A L S GV+
Sbjct: 447 HGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVK 506
Query: 375 ILKSAQKAVVDG 386
+ A++DG
Sbjct: 507 ANEVIYTALIDG 518
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 161/337 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ D +L+ M E G+ P VVTYN+LI G + ++ + ++LD M
Sbjct: 339 VLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESN 398
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+ +YN L+ L + K +A + M+ L+P T+N +++G CK ++A
Sbjct: 399 SCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESA 458
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+ + ++G VP+ TY++ I LCK GR+ A + + G N + YT ++
Sbjct: 459 YRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDG 518
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + +L M + + Y +I K ++KEA+ + +M+T GV+
Sbjct: 519 YCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPT 578
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+Y LI K+G + A + + M G++ D T+T + G ++ +
Sbjct: 579 VVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIA 638
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
MN+ G +L Y ++D + G A + + M
Sbjct: 639 KMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCM 675
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 158/343 (46%), Gaps = 8/343 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ +++ +M G+ P VVTY LI ++ +L + + M+ +
Sbjct: 549 VLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSL 608
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +Y + +H F G +E + V M + P T+ ++++G + T A
Sbjct: 609 GYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRA 668
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG-DSGHAPNAITYTTIMK 179
+ + G P L +ILIK L R++ R E+G DS N++ +
Sbjct: 669 FDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETR---SEIGIDSVSNVNSVDIADV-- 723
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
++ +Y++ L++ M G T D Y +IA F + RL+EA + M G+
Sbjct: 724 --WKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSP 781
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
YN+L++ CK G A L+D M + G ++ +L+ GL G+ + A+
Sbjct: 782 SEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVF 841
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS 342
+ G++ + A+ ++D L K +D + + ME KD+
Sbjct: 842 HGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKDA 884
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 153/350 (43%), Gaps = 4/350 (1%)
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
E P + YN+++ L + DE V+ +++ ++P TFN M+NG CK
Sbjct: 152 EFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVV 211
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A + + G P+ TY LI G C+ + A + + G N ++YT ++
Sbjct: 212 EAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLI 271
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ L++ + M Y +I A GR EA + +M G +
Sbjct: 272 HGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCE 331
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
++ +Y LI+ CKE K++ A +L EM ++G T+ LIDG CK G I A
Sbjct: 332 PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEI 391
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EVKDS---FTYSSMVHNLCK 354
L+ M N YN ++ L K K+ A+ + M E K S TY+S++H CK
Sbjct: 392 LDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCK 451
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
L SA +LL ++G+ + +D L G EA + ++
Sbjct: 452 VNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK 501
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 202/407 (49%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ YC ++++M E G PD +T+ +LI G ++ S ++ L+D M++ G
Sbjct: 85 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 144
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P++ +Y +++ L + G D A + M + FN +++ LCK R+ D+AL
Sbjct: 145 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 204
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ ++ G P +VTY+ LI LC GR A +L ++ + PN +T+ ++
Sbjct: 205 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 264
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K+ ++ M ++ D F Y ++I F RL +A E MV+ D+
Sbjct: 265 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL 324
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YNTLI +CK ++E L EM +G D T+T LI GL G+ A+ +
Sbjct: 325 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 384
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVK-DSFTYSSMVHNLCKAKR 357
M G ++ Y+ ++D L +GK++ A+ VF+ M E+K D + Y++M+ +CKA +
Sbjct: 385 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 444
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ L S GV+ ++ GL +EA + K++
Sbjct: 445 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 491
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 179/353 (50%), Gaps = 4/353 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++ C+ D + +LN+M A I DVV +N++I + + +L+L EM
Sbjct: 154 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 213
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+V +Y+SL+ CL G+ +A+++ DMI + P TFN +++ K A
Sbjct: 214 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 273
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + K P++ TYN LI G C RL A+ + + + P+ TY T++K
Sbjct: 274 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 333
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++++ + G E+ M +G D Y T+I G A +QMV+DGV D
Sbjct: 334 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 393
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++Y+ L++ C GKLE A + D M+K + D Y +T +I+G+CKAG +
Sbjct: 394 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 453
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
++ G N+ YN ++ L + A + + M+ + DS TY++++
Sbjct: 454 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 506
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 167/329 (50%), Gaps = 1/329 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + + +L+ M E I+P++VT+N+LI + + L D+M++
Sbjct: 225 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 284
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+++YNSL++ + D+A ++F+ M+ D P T+N ++ G CK++ ++
Sbjct: 285 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 344
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + G V + VTY LI+GL G A+ + K++ G P+ +TY+ ++
Sbjct: 345 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 404
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N K + LE+ M++ D + Y T+I K G++ + D + GV+ ++
Sbjct: 405 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 464
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNT+I+ C + L+ AY LL +M++ G D T+ LI + G+ + +
Sbjct: 465 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 524
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
M F + + + L DG++D +
Sbjct: 525 MRSCRFVGDASTIGLVANML-HDGRLDKS 552
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 89/183 (48%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D + +M G+ PD++TY+ L+ G N L +L++ D M + I D++ Y ++
Sbjct: 376 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 435
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ + + GK D+ +F + + P T+N M++GLC R A + + +++ G
Sbjct: 436 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 495
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+P+ TYN LI+ + G + +++E+ +A T + R K L+
Sbjct: 496 LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLD 555
Query: 193 ILS 195
+LS
Sbjct: 556 MLS 558
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 6/209 (2%)
Query: 207 FGYCTVIAAFVKIGR--LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
F + +++A K+ + L + + +M+ G + IV+ ++L+N YC ++ A L+
Sbjct: 43 FEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 102
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
D+M + G+ D T T LI GL A ++ M + G NL Y +V+ L K
Sbjct: 103 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 162
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
G ID A N+ ME D +++++ +LCK + + A L G+R
Sbjct: 163 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 222
Query: 381 KAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+++ L G +A ++ S + KI+
Sbjct: 223 SSLISCLCSYGRWSDASQLLSDMIEKKIN 251
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ D G+ + + G+ P+VVTYN++I+G LL + LL +M E G
Sbjct: 435 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 494
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM----ICGDLTPCTATFNIMLNGLCKNRYT 117
PD +YN+L+ + G + + ++M GD + N++ +G +
Sbjct: 495 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFL 554
Query: 118 D 118
D
Sbjct: 555 D 555
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 205/399 (51%), Gaps = 8/399 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C +++RM E G P ++T N+L+ G N +S ++ L+D M+E G
Sbjct: 164 LLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETG 223
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y +++ + + G+ A + + M ++ ++I+++GLCK+ DNA
Sbjct: 224 FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAF 283
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ GF +++TYN LI G C AGR +L+++ +PN +T++ ++
Sbjct: 284 NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSF 343
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + ++L M ++G + Y ++I F K RL+EA ++ M++ G DI
Sbjct: 344 VKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI 403
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+++N LIN YCK +++ L EM +G + T+ L+ G C++G ++ A+ +
Sbjct: 404 MTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQE 463
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M ++ +Y ++D L +G+++ A+ +F +E D Y ++H +C A +
Sbjct: 464 MVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASK 523
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ A L S GV++ A ++ L CR+++
Sbjct: 524 VDDAWDLFCSLPLKGVKLDARAYNIMISEL----CRKDS 558
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 196/379 (51%), Gaps = 4/379 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ +C+ ++ + ++ + G PD V +N+L+ G +S +L+L+D M+EM
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P + + N+L++ L GK +A + M+ P T+ +LN +CK+ T A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + R +++ + V Y+I+I GLCK G L A + E+ G + ITY T++
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ G ++L M ++ + + + +I +FVK G+L+EA +++M+ G+ +
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++YN+LI+ +CKE +LE A ++D M +G + D T ILI+G CKA I
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M+ G +N YN +V + GK++ A +F+ M + D +Y ++ LC
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487
Query: 357 RLPSASKLLLSCLKSGVRI 375
L A ++ KS + +
Sbjct: 488 ELEKALEIFGKIEKSKMEL 506
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 195/438 (44%), Gaps = 39/438 (8%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
+ D + M ++ P V+ +N L + + L L +M GI +++
Sbjct: 67 IKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTL 126
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
+ +++C + K A ++ P T FN +LNGLC AL + + +
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G P L+T N L+ GLC G++ A ++ + ++G PN +TY ++ ++ + L
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+E+L M+ + D Y +I K G L A + +M G + DI++YNTLI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 250 LYC-----------------------------------KEGKLEAAYLLLDEMEKQGFEC 274
+C KEGKL A LL EM ++G
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
+ T+ LIDG CK ++ A ++ M G D ++ +N +++ K +ID + +F
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 335 ESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
M ++ ++ TY+++V C++ +L A KL + VR + K ++DGL +
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 391 GCRREAKKIQSKIRMAKI 408
G +A +I KI +K+
Sbjct: 487 GELEKALEIFGKIEKSKM 504
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 165/329 (50%), Gaps = 1/329 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C +D G +L M + ISP+VVT++ LI + L + LL EM++ G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+ +YNSL+ + + +EA ++ MI P TFNI++NG CK D+ L
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGL 423
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + G + VTYN L++G C++G+L A+ + +E+ P+ ++Y ++
Sbjct: 424 ELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N + + LEI +++ D Y +I ++ +A D + GV+LD
Sbjct: 484 CDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDA 543
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN +I+ C++ L A +L +M ++G D+ T+ ILI + A +E
Sbjct: 544 RAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEE 603
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
M GF +++ +++ L G++D +
Sbjct: 604 MKSSGFPADVSTVKMVINMLSS-GELDKS 631
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 180/391 (46%), Gaps = 39/391 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ S D + + N M G D++TYN+LI G LL +M++
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P+V +++ L+ + GK EA+++ ++M+ + P T T+N +++G CK + A
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++M + G P+++T+NILI G CKA R+ + +E+ G N +TY T+++
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ- 446
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
G+C + G+L+ A ++MV+ V+ D
Sbjct: 447 ---------------------------GFC-------QSGKLEVAKKLFQEMVSRRVRPD 472
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IVSY L++ C G+LE A + ++EK E D + I+I G+C A + A
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFC 532
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
+ G + AYN ++ L + + A +F M D TY+ ++
Sbjct: 533 SLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDD 592
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+A++L+ SG S K V++ L
Sbjct: 593 DATTAAELIEEMKSSGFPADVSTVKMVINML 623
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 205/452 (45%), Gaps = 54/452 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LIDAYC+ D + +L M G+ P++++YN +I G R + + ++L+EM G
Sbjct: 255 LIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKG 314
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +YN+L++ + G +A + +M+ ++P T+ ++N +CK R + A+
Sbjct: 315 FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAM 374
Query: 122 RMF-----RGLQKH------------------------------GFVPELVTYNILIKGL 146
F RGL+ + GF P +VTYN I G
Sbjct: 375 EFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGH 434
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C R+ A +++E+ + G AP+ ++Y+TI+ R + ++ M KG + D
Sbjct: 435 CVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDA 494
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y ++I ++ RL EA D ++M+ G+ D +Y TLIN YC EG L A L DE
Sbjct: 495 VTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDE 554
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGAR---LHLEYMNKIGFD----------SNLEA 313
M +GF D T+++LI+GL K + A+ L Y + D SN+E
Sbjct: 555 MIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEF 614
Query: 314 YNCI--VDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLS 367
+ + + G + A VFESM ++ Y+ ++H C+ LP A L
Sbjct: 615 KSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKE 674
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ SG ++ L G E ++
Sbjct: 675 MIHSGFVPHTVTVITLIKALFKEGMNEEMSEV 706
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 189/379 (49%), Gaps = 6/379 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGA--TRNSLLSCSLDLLDEML 58
+++ +Y D +N + +G P V++YNS++ +R S+ + ++ EM+
Sbjct: 147 LMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMI 206
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
+ P+V++YN L+ +G+ + F +M P T+N +++ CK D
Sbjct: 207 RSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRID 266
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A + + + G P L++YN++I GLC+ G ++ A IL+E+G G P+ +TY T++
Sbjct: 267 EAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLL 326
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ + L I + M R G + Y +I + K L A ++ +QM G++
Sbjct: 327 NGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLR 386
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+ +Y TLI+ + ++G L AY +L+EM + GF T+ I G C ++ A
Sbjct: 387 PNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGV 446
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
++ M + G ++ +Y+ I+ + G++D A + + M K D+ TYSS++ LC+
Sbjct: 447 VQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCE 506
Query: 355 AKRLPSASKLLLSCLKSGV 373
+RL A L L G+
Sbjct: 507 MRRLTEACDLSQEMLDMGL 525
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 182/370 (49%), Gaps = 4/370 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C G M G P+VVTYN+LI + + + LL M
Sbjct: 219 ILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSK 278
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P++ SYN +++ L + G EA + ++M TP T+N +LNG CK A
Sbjct: 279 GMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQA 338
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + ++G P +VTY LI +CKA L A ++ G PN TYTT++
Sbjct: 339 LVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDG 398
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R IL+ M G++ Y I + R++EA +++MV G+ D
Sbjct: 399 FSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPD 458
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+VSY+T+I+ +C++G+L+ A+ + EM ++G D T++ LI GLC+ + A +
Sbjct: 459 VVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQ 518
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M +G + Y +++ +G ++ A+++ + M K D+ TYS +++ L K
Sbjct: 519 EMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQA 578
Query: 357 RLPSASKLLL 366
R A +LL
Sbjct: 579 RTREAKRLLF 588
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 184/390 (47%), Gaps = 4/390 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ M + +SP+V TYN LI G L L EM G P+V +YN+L+
Sbjct: 201 VYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYC 260
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
++G+ DEA + + M + P ++N+++NGLC+ A + + GF P+ V
Sbjct: 261 KMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEV 320
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN L+ G CK G A I E+ +G +P+ +TYT ++ + R +E M
Sbjct: 321 TYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM 380
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ +G + Y T+I F + G L EA + +M G +V+YN I+ +C ++
Sbjct: 381 RIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERM 440
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
E A ++ EM ++G D +++ +I G C+ G + A + M + G + Y+ +
Sbjct: 441 EEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSL 500
Query: 318 VDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ L + ++ A ++ + M D FTY+++++ C L A L + G
Sbjct: 501 IQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGF 560
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+++GL REAK++ K+
Sbjct: 561 LPDAVTYSVLINGLNKQARTREAKRLLFKL 590
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 155/340 (45%), Gaps = 36/340 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
I +C + ++ M E G++PDVV+Y+++I+G R L + + EM+E G
Sbjct: 430 FIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKG 489
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y+SL+ L ++ + EA + Q+M+ L P T+ ++N C + AL
Sbjct: 490 VSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKAL 549
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + GF+P+ VTY++LI GL K R R A+ +L +L P+ +TY T+++ C
Sbjct: 550 HLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENC 609
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N ++K +I F G + EA E MV +
Sbjct: 610 -SNIEFK-------------------SVVALIKGFCMKGLMHEADRVFESMVERNHKPGE 649
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG----------- 290
YN +I+ +C+ G L A+ L EM GF T LI L K G
Sbjct: 650 AVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGD 709
Query: 291 NIKGARLHLEYMNKIGF-----DSNLEAYNCIVDRLGKDG 325
++ RL+ + K+ + N+EA ++ + KDG
Sbjct: 710 TLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDG 749
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 150/292 (51%), Gaps = 6/292 (2%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA-GRLR-TARWI 158
+A F++M+ D A+ + GF+P +++YN ++ + ++ G ++ +A +
Sbjct: 142 SAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEV 201
Query: 159 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 218
+E+ S +PN TY +++ + + GL M+R G + Y T+I A+ K
Sbjct: 202 YREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCK 261
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
+GR+ EA ++ M + G+Q +++SYN +IN C+EG ++ A+ +L+EM +GF D+ T
Sbjct: 262 MGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVT 321
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+ L++G CK GN A + M + G ++ Y +++ + K ++ A+ F+ M
Sbjct: 322 YNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMR 381
Query: 339 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
++ + TY++++ + L A ++L +SG A + G
Sbjct: 382 IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHG 433
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 213/446 (47%), Gaps = 55/446 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C D G+++L ++ + G+ P ++T+ +LI G + + +L+L D+M+
Sbjct: 131 ILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVAR 190
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV++Y ++++ L ++G+ A + + M P T++ +++ LCK+R + A
Sbjct: 191 GCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEA 250
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGL---------------------------------- 146
L +F ++ G P +V+Y LI+GL
Sbjct: 251 LDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDI 310
Query: 147 -CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA------MKR 199
CK G + A+ +LK + + G PN ITY ++M Y L +E++ A M
Sbjct: 311 FCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLM------HGYSLQMEVVEARKLFDVMIT 364
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
+G D F Y +I + + R+ EA +M+ G+ + VSY TLI+ +C+ GKL
Sbjct: 365 RGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLRE 424
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A L +M G+ D T+++L++G CK G + A M NL Y ++D
Sbjct: 425 ARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILID 484
Query: 320 RLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
+ K G ++HA +F + V D Y+++++ LCK L A + + G
Sbjct: 485 SMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPP 544
Query: 376 LKSAQKAVVDG-LRHSGCRREAKKIQ 400
+ + ++ G L+H + E++ +Q
Sbjct: 545 NEFSYNVIIRGFLQH---KDESRAVQ 567
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 177/367 (48%), Gaps = 5/367 (1%)
Query: 4 DAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM-GI 62
DA F + D N M P ++ +N L++ R ++ L + +E+ G+
Sbjct: 63 DASSSFRNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGL 122
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P+ + N L++C + D V +I L P TF ++NGLCK AL
Sbjct: 123 SPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALE 182
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+F + G P++ TY +I GLCK G A ++K++G+ G P+ +TY+T++
Sbjct: 183 LFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLC 242
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
++R L+I S MK KG + Y ++I R KEA+ + +M + + DIV
Sbjct: 243 KDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIV 302
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
+++ LI+++CKEG + A +L M + G E + T+ L+ G + AR + M
Sbjct: 303 TFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVM 362
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRL 358
G ++ +Y+ +++ +ID A +F M ++ +Y++++H C+ +L
Sbjct: 363 ITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKL 422
Query: 359 PSASKLL 365
A +L
Sbjct: 423 REARELF 429
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 142/278 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID +C+ + +L M E G+ P+V+TYNSL+ G + + + L D M+
Sbjct: 306 LLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITR 365
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV+SY+ L++ + + DEA ++F +MI LTP T ++ +++ C+ A
Sbjct: 366 GCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREA 425
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ + +G++P+L TY++L++G CK G L A + + + + PN + YT ++
Sbjct: 426 RELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDS 485
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ ++ S + G D Y T+I K G L EA + +M DG +
Sbjct: 486 MCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPN 545
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
SYN +I + + A L+ EM +GF D+ T
Sbjct: 546 EFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGT 583
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 108/274 (39%), Gaps = 67/274 (24%)
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL-KELGDSGHAPNAIT 173
R D+AL F + +P ++ +N L+ + + + A L K++ +G +PN T
Sbjct: 69 RNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCT 128
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
++ C + LG +V+A +K+G
Sbjct: 129 LNILINCFCLMQHVDLGF-------------------SVLAKVIKLG------------- 156
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
+Q I+++ TLIN CK G+ A L D+M +G + D YT+T +I+GLCK G
Sbjct: 157 ---LQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETA 213
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLC 353
A ++ M ++G D TYS+++ +LC
Sbjct: 214 AAAGLIKKMGEVGCQP-------------------------------DVVTYSTLIDSLC 242
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
K + + A + G+ + +++ GL
Sbjct: 243 KDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGL 276
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 5/174 (2%)
Query: 241 IVSYNTLINLYCKEGKL-EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
I+ +N L++ + + +A L +ME G + T ILI+ C ++ L
Sbjct: 90 IIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVL 149
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ K+G + + +++ L K G+ A+ +F+ M + D +TY+++++ LCK
Sbjct: 150 AKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKM 209
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+A+ L+ + G + ++D L EA I S ++ IS
Sbjct: 210 GETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGIS 263
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 212/442 (47%), Gaps = 51/442 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ D + M+ GI PDV++Y +LI G + + L +EML++
Sbjct: 307 IIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDV 366
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PDV + + L+ L + GK EAN++ + +I P T ++ GLC A
Sbjct: 367 GIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKA 426
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE-LGDSGH-----APNAITY 174
++F +QK G +P +VT L+KGLC++G ++ A + K L D+ PNAI+Y
Sbjct: 427 TQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISY 486
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
+ I+ + + E+ MK G D Y ++I F + G+ K+A +MV
Sbjct: 487 SIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVD 546
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLD----------------------------- 265
GVQ D+ +++ LI++ CKEGK+ A LL+
Sbjct: 547 IGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISE 606
Query: 266 ------EMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIG-----FDSNLEA 313
+M+K G D T+ L+ GLC+ GNIK A LH + ++ G F ++ +
Sbjct: 607 ATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVIS 666
Query: 314 YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 369
Y+ I+D L K G+ D A +F+ M+ + + +Y+S++H C++ +L A L +
Sbjct: 667 YSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMV 726
Query: 370 KSGVRILKSAQKAVVDGLRHSG 391
GV++ ++ G G
Sbjct: 727 DQGVQLNAVTYSVMIHGFCKEG 748
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/450 (28%), Positives = 212/450 (47%), Gaps = 51/450 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ D + M+ G+ PDV++Y SLI G R+ + L +EML++
Sbjct: 126 IIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDV 185
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI DV + + L+ L + GK EAN + + MI T++ ++ GLC A
Sbjct: 186 GIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEA 245
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE-LGDSGH-----APNAITY 174
R+F +QK G P+ + Y L+KGLC+ G + TA + +E L D+G P I+Y
Sbjct: 246 TRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISY 305
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
+ I+ ++R+ E+ MK +G D Y T+I F G+ ++A +M+
Sbjct: 306 SIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLD 365
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLD----------------------------- 265
G+Q D+ + + LI++ CK+GK+ A LL+
Sbjct: 366 VGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISK 425
Query: 266 ------EMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNK-----IGFDSNLEA 313
+M+K G + T L+ GLC++GNIK A LH ++ I N +
Sbjct: 426 ATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAIS 485
Query: 314 YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 369
Y+ I+D L K G+ D A +F+ M+ + D +Y+S++H C++ + A L +
Sbjct: 486 YSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMV 545
Query: 370 KSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
GV+ + ++D L G EA ++
Sbjct: 546 DIGVQPDVTTFSVLIDMLCKEGKVIEANEL 575
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 154/274 (56%), Gaps = 8/274 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ D + M+ G+ PDV++Y SLI G R+ + L +EM+++
Sbjct: 488 IIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDI 547
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV +++ L+ L + GK EAN + + MI P T T+ ++ GLC N A
Sbjct: 548 GVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEA 607
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE-LGDSGH-----APNAITY 174
++F +QK G +P++VTY L+KGLC+ G ++TA + K+ L D+G P+ I+Y
Sbjct: 608 TQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISY 667
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
+ I+ ++ + E+ MK G + Y ++I F + G+L++A +MV
Sbjct: 668 SIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVD 727
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
GVQL+ V+Y+ +I+ +CKEG+++ A L +ME
Sbjct: 728 QGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKME 759
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 178/359 (49%), Gaps = 12/359 (3%)
Query: 18 ILNRMREAGIS--PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
+LN GI P +++Y+ +I G ++ + +L EM GI PDV SY +L+H
Sbjct: 287 MLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHG 346
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
GK ++A +F +M+ + P T +++++ LCK A ++ + + G +P+
Sbjct: 347 FCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPD 406
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
+VT L+KGLC R+ A + ++ G PN +T T+MK ++ K+ LE+
Sbjct: 407 VVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHK 466
Query: 196 AMKRKGYTF------DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
M + + Y +I K GR EA + ++M GV D++SY +LI+
Sbjct: 467 NMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIH 526
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
+C+ GK + A L +EM G + D T ++LID LCK G + A LE M + G
Sbjct: 527 GFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIP 586
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 364
N Y +V L + +I A +F M+ + D TY +++ LC+ + +A +L
Sbjct: 587 NTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALEL 645
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 187/377 (49%), Gaps = 16/377 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ +L + + G PDVVT +L+ G +S + L +M ++
Sbjct: 377 VLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKL 436
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG------DLTPCTATFNIMLNGLCKN 114
G P+V + +LM L Q G A + ++M+ + P +++I+++GLCK
Sbjct: 437 GCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKC 496
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D A +F+ ++ G +P++++Y LI G C++G+ + A+++ E+ D G P+ T+
Sbjct: 497 GREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTF 556
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
+ ++ + K E+L M ++G + Y T++ R+ EAT +M
Sbjct: 557 SVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQK 616
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ------GFECDKYTHTILIDGLCK 288
G D+V+Y TL+ C+ G ++ A L +M F+ D +++I+IDGLCK
Sbjct: 617 LGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCK 676
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 344
G AR + M +G N+ +Y ++ + GK++ A ++F M + ++ T
Sbjct: 677 HGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVT 736
Query: 345 YSSMVHNLCKAKRLPSA 361
YS M+H CK ++ A
Sbjct: 737 YSVMIHGFCKEGQIDKA 753
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 190/389 (48%), Gaps = 18/389 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID +C+ +L M + G D+VTY++LI G +S + L M ++
Sbjct: 15 VLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKL 74
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT-------PCTATFNIMLNGLCK 113
G PD +Y +LM L Q GK + A + Q+M+ D + P +++I+++GLCK
Sbjct: 75 GCRPDAIAYGTLMKGLCQTGKINIALHLHQEML-NDTSQYGIKCKPTLVSYSIIIDGLCK 133
Query: 114 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+R D A +F+ ++ G +P++++Y LI G C++G+ A+ + E+ D G + T
Sbjct: 134 DRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTT 193
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
+ ++ + K E+L M ++G D Y T+I R+ EAT M
Sbjct: 194 SSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQ 253
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM----EKQGFECDK--YTHTILIDGLC 287
G + D ++Y TL+ C+ G + A L EM + G +C +++I+IDGLC
Sbjct: 254 KLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLC 313
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF-ESMEV---KDSF 343
K AR + M G ++ +Y ++ GK + A +F E ++V D
Sbjct: 314 KDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVT 373
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
T S ++ LCK ++ A+KLL ++ G
Sbjct: 374 TSSVLIDMLCKKGKVIEANKLLEVVIQRG 402
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 190/394 (48%), Gaps = 16/394 (4%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M GI PDV T LI + + + +LL+ M++ G D+ +Y++L+ L +
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL----RMFRGLQKHGFV--PE 135
EA ++F M P + ++ GLC+ + AL M ++G P
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
LV+Y+I+I GLCK R AR + KE+ G P+ I+YT+++ R+ K++ + +
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M G D +I K G++ EA + +E M+ G LDIV+Y+TLI C +
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIG-----FDS 309
++ A L M+K G D + L+ GLC+ GNI A +LH E +N G
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKP 300
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
L +Y+ I+D L KD + D A +F+ M+ + D +Y++++H C + + A L
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF 360
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L G++ + ++D L G EA K+
Sbjct: 361 NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKL 394
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 175/349 (50%), Gaps = 14/349 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C + +M++ G P+VVT +L+ G ++ + +L+L ML
Sbjct: 413 LVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDT 472
Query: 62 IP------PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
P P+ SY+ ++ L + G+ DEA +F++M + P ++ +++G C++
Sbjct: 473 SPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSG 532
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
+A +F + G P++ T+++LI LCK G++ A +L+ + G PN +TYT
Sbjct: 533 KWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYT 592
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T++K N + ++ M++ G D Y T++ + G +K A + ++M++D
Sbjct: 593 TLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSD 652
Query: 236 GVQL------DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
Q D++SY+ +I+ CK G+ + A L EM+ G + ++T LI G C++
Sbjct: 653 TGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRS 712
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
G ++ A+ M G N Y+ ++ K+G+ID A+ F+ ME
Sbjct: 713 GKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL--FQKME 759
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 189/354 (53%), Gaps = 8/354 (2%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+++RM E G PDVVTYNS++ G R+ S +LDLL +M E + DV++Y++++ L
Sbjct: 170 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 229
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK-NRYTDNALRMFRGLQKHGFVPEL 136
+ G D A +F++M + T+N ++ GLCK ++ D AL + + + VP +
Sbjct: 230 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL-LLKDMVSREIVPNV 288
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILS 195
+T+N+L+ K G+L+ A + KE+ G +PN ITY T+M C +NR + +L
Sbjct: 289 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN-NMLD 347
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M R + D + ++I + + R+ + + G+ + V+Y+ L+ +C+ G
Sbjct: 348 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 407
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
K++ A L EM G D T+ IL+DGLC G ++ A E + K D + Y
Sbjct: 408 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 467
Query: 316 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
I++ + K GK++ A N+F S+ K + TY+ M+ LCK L A+ LL
Sbjct: 468 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 521
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 206/407 (50%), Gaps = 4/407 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ +C+ Y++L ++ + G PD T+N+LI G +S ++ L+D M+E
Sbjct: 118 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 177
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +YNS+++ + + G A + + M ++ T++ +++ LC++ D A
Sbjct: 178 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 237
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +F+ ++ G +VTYN L++GLCKAG+ +LK++ PN IT+ ++
Sbjct: 238 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 297
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + E+ M +G + + Y T++ + RL EA + ++ MV + D
Sbjct: 298 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 357
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV++ +LI YC +++ + + K+G + T++IL+ G C++G IK A +
Sbjct: 358 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 417
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAK 356
M G ++ Y ++D L +GK++ A+ +FE ++ Y++++ +CK
Sbjct: 418 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 477
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++ A L S GV+ ++ GL G EA + K+
Sbjct: 478 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 524
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 169/337 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID+ C+ DA ++ M GI VVTYNSL+ G + + LL +M+
Sbjct: 224 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 283
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V ++N L+ + GK EAN ++++MI ++P T+N +++G C A
Sbjct: 284 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 343
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + ++ P++VT+ LIKG C R+ + + + G NA+TY+ +++
Sbjct: 344 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 403
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ K KL E+ M G D Y ++ G+L++A + E + + L I
Sbjct: 404 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 463
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V Y T+I CK GK+E A+ L + +G + + T+T++I GLCK G++ A + L
Sbjct: 464 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 523
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
M + G N YN ++ +DG + + + E M+
Sbjct: 524 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 560
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 154/301 (51%), Gaps = 4/301 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D + + + M GISP+++TYN+L+ G + LS + ++LD M+
Sbjct: 293 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 352
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PD+ ++ SL+ + + D+ +VF+++ L T++I++ G C++ A
Sbjct: 353 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 412
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ + HG +P+++TY IL+ GLC G+L A I ++L S + YTTI++
Sbjct: 413 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 472
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + + ++ KG + Y +I+ K G L EA + +M DG +
Sbjct: 473 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 532
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+YNTLI + ++G L A+ L++EM+ GF D + ++ID L A RL L
Sbjct: 533 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK----RLTLR 588
Query: 301 Y 301
Y
Sbjct: 589 Y 589
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 190/407 (46%), Gaps = 18/407 (4%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D + M + P +V ++ + R + LD ++ GI ++++ N +
Sbjct: 60 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
++C + K A V ++ P T TFN ++ GL A+ + + ++G
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P++VTYN ++ G+C++G A +L+++ + + TY+TI+ R+ +
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 239
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ M+ KG Y +++ K G+ + ++ MV+ + +++++N L++++
Sbjct: 240 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 299
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM--NK-----I 305
KEGKL+ A L EM +G + T+ L+DG C + A L+ M NK +
Sbjct: 300 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 359
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 361
F S ++ Y C+V R +D + VF ++ V ++ TYS +V C++ ++ A
Sbjct: 360 TFTSLIKGY-CMVKR------VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 412
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+L + GV ++DGL +G +A +I ++ +K+
Sbjct: 413 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 459
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 139/289 (48%), Gaps = 4/289 (1%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K D+A +FQ+MI P F+ + + + + + L + L+ +G + T N
Sbjct: 58 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 117
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
I+I C+ + A +L ++ G+ P+ T+ T++K F K + ++ M
Sbjct: 118 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 177
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G D Y +++ + G A D + +M V+ D+ +Y+T+I+ C++G ++AA
Sbjct: 178 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 237
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
L EME +G + T+ L+ GLCKAG L L+ M N+ +N ++D
Sbjct: 238 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 297
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
K+GK+ A +++ M + + TY++++ C RL A+ +L
Sbjct: 298 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 346
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/161 (18%), Positives = 71/161 (44%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C + I ++++ + +V Y ++I G + + + +L +
Sbjct: 433 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 492
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V +Y ++ L + G EAN + + M P T+N ++ ++ +
Sbjct: 493 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 552
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
++ ++ GF + + ++I L A + T R+ L +
Sbjct: 553 AKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSK 593
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 207/412 (50%), Gaps = 6/412 (1%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
I+A+C+ + + M + G+SP+VVTYN+LI G ++ L + ++M++ G+
Sbjct: 253 INAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGV 312
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
+ +Y+ L++ L +L K +EAN V ++ + TP +N +++G CK +ALR
Sbjct: 313 NATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALR 372
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ + G P VT N +I+G CK G++ A IL+E+ G + N +TTI+
Sbjct: 373 IRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLC 432
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
N +++ L L M + + T++ K G+ +A + +++ G ++V
Sbjct: 433 MNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLV 492
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEY 301
+ N LI+ CK G ++ A LL +M ++GF DK T+ LI G CK G + +G +L E
Sbjct: 493 TTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGE- 551
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKR 357
M K G + + YN ++ + + GK+D A+N++ + +D +TY M+ CKA +
Sbjct: 552 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADK 611
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+ KL L + + ++ +G EA K+ +R I
Sbjct: 612 IEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIP 663
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 201/437 (45%), Gaps = 39/437 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ + I M GI+P+ VT NS+I G + + + +L+EML G
Sbjct: 357 LIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG 416
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ ++ +++H L + + A R ++M+ ++ P ++ GLCK +A+
Sbjct: 417 FSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAV 476
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ L + GF LVT N LI GLCK G ++ A +LK++ + G + ITY T++ C
Sbjct: 477 ELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGC 536
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD-------------- 227
+ K + G ++ M ++G D F Y +I +IG+L EA +
Sbjct: 537 CKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNV 596
Query: 228 ---------------------YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+++T ++L+ V YNTLI YC+ G A+ L D+
Sbjct: 597 YTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDD 656
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M +G T++ LI G+C G ++ A+ ++ M K G N+ Y ++ K G+
Sbjct: 657 MRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQ 716
Query: 327 IDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+D +NV + M D TY+ M+ K+ + +A+KLL + G+
Sbjct: 717 MDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNV 776
Query: 383 VVDGLRHSGCRREAKKI 399
+ +G G E KI
Sbjct: 777 LTNGFCKEGKIEEGFKI 793
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 177/353 (50%), Gaps = 4/353 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ + R+ E G ++VT N+LI G + + ++ LL +MLE G
Sbjct: 462 LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 521
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
D +YN+L+ + GK +E ++ +M+ + P T T+N++++G+C+ D A+
Sbjct: 522 FVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAV 581
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + VP + TY ++I G CKA ++ + EL N++ Y T+++
Sbjct: 582 NLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAY 641
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
RN ++ M+ KG Y ++I IGR+++A +++M +G+ ++
Sbjct: 642 CRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNV 701
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V Y LI YCK G+++ +L EM +K T+T++IDG K+G++K A L
Sbjct: 702 VCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHE 761
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 350
M G + YN + + K+GKI+ + + M + D TY+++VH
Sbjct: 762 MVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVH 814
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 188/407 (46%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + D + +M + G++ ++TY+ LI G + + + +L E LE G
Sbjct: 287 LIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKG 346
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ YN+L+ ++G +A R+ DM+ + P + T N ++ G CK + A
Sbjct: 347 FTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAE 406
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + GF + +I LC R +A L+E+ PN TT++
Sbjct: 407 CILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGL 466
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K+ +E+ + KG+ + +I K G ++EA +++M+ G LD
Sbjct: 467 CKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDK 526
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YNTLI+ CKEGK+E + L EM KQG E D +T+ +LI G+C+ G + A
Sbjct: 527 ITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNE 586
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
N+ Y ++D K KI+ +F + + +S Y++++ C+
Sbjct: 587 CKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGN 646
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
A KL G+ + +++ G+ + G +AK + ++R
Sbjct: 647 TVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMR 693
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 148/319 (46%), Gaps = 35/319 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + +L +M E G D +TYN+LI+G + + L EM++ G
Sbjct: 497 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 556
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK-------- 113
I PD ++YN L+H + ++GK DEA ++ + DL P T+ +M++G CK
Sbjct: 557 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGE 616
Query: 114 ---------------------------NRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
N T A ++ ++ G P TY+ LI G+
Sbjct: 617 KLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGM 676
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C GR+ A+ ++ E+ G PN + YT ++ + + + +L M +
Sbjct: 677 CNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNK 736
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I + K G +K A + +MV G+ D V+YN L N +CKEGK+E + + D
Sbjct: 737 ITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDY 796
Query: 267 MEKQGFECDKYTHTILIDG 285
M ++G D+ T+T L+ G
Sbjct: 797 MSQEGLPLDEITYTTLVHG 815
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 182/386 (47%), Gaps = 15/386 (3%)
Query: 19 LNRMREAGISPDVVTYNSLI---AGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
LN + E+G++ V + LI RN ++ + + G+ P V + L+
Sbjct: 164 LNEVGESGVA--VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSS 221
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
L + + +++ VF+ M G ++P F+ +N CK ++A+++F ++K G P
Sbjct: 222 LVKANELEKSYWVFETMRQG-VSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPN 280
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
+VTYN LI GLCK G L A +++ G ITY+ ++ + K+ +L
Sbjct: 281 VVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLK 340
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
KG+T + Y T+I + K+G L +A MV+ G+ + V+ N++I +CK G
Sbjct: 341 ETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIG 400
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
++E A +L+EM +GF + T +I LC + A L M N
Sbjct: 401 QMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLT 460
Query: 316 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
+V L K+GK A+ ++ + K + T ++++H LCK + A +LL L+
Sbjct: 461 TLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLER 520
Query: 372 GVRILKSAQKAVVDGLRHSGCRREAK 397
G + K ++ SGC +E K
Sbjct: 521 GFVLDKITYNTLI-----SGCCKEGK 541
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/383 (31%), Positives = 184/383 (48%), Gaps = 19/383 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M+I+ C+ +L M G PD VTYN+L+ G + +L L EM+
Sbjct: 58 MIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRN 117
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V +Y SL++ + + G + A F M L P T+ ++NG + D A
Sbjct: 118 GLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEA 177
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+ + + GF+P +VTYN LI G C GR+ A +L+++ G P+ ++Y+TI+
Sbjct: 178 YRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISG 237
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
RN++ ++ M K D Y ++I + RL EA D ++M+T + D
Sbjct: 238 FARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPD 297
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR---L 297
+Y TLIN YCKEG L A L DEM ++GF D T+ +LI+GL K K AR L
Sbjct: 298 EFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLL 357
Query: 298 HLEYMNKI--GFDSNLEAYNC----------IVDRLGKDGKIDHAINVFESMEVK----D 341
L Y + I N NC +V G +D A VFESM K +
Sbjct: 358 KLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPN 417
Query: 342 SFTYSSMVHNLCKAKRLPSASKL 364
Y+ ++H C+ + A KL
Sbjct: 418 EAIYNVIIHGHCRIGNVLKAYKL 440
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 173/356 (48%), Gaps = 4/356 (1%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
G M G P+VVTYN++I G + + L M G+ P++ ++N +++
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
L + G+ E + V +M P T+N ++NG CK AL + + ++G P
Sbjct: 62 GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
+VTY LI +CKAG L A ++ G PN TYTTI+ + +L
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
+ M R G+ Y +I +GR++EA ++ MV GV D+VSY+T+I+ + +
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARN 241
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
+L+ A+ + EM + D T++ LI GLC+ + A + M I + Y
Sbjct: 242 QELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTY 301
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
+++ K+G ++ A+++ + M K D+ TY+ +++ L K R A +LLL
Sbjct: 302 TTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLL 357
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 150/287 (52%), Gaps = 4/287 (1%)
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
R F++M P T+N M++G CK + TD A R + G P L+T+N++I GL
Sbjct: 4 RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C+ GRL+ +L E+ G+ P+ +TY T++ + + L + + M R G + +
Sbjct: 64 CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y ++I + K G L A ++ +QM G+ + +Y T+IN + ++G L+ AY +L+E
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M + GF T+ LI+G C G ++ A L+ M G ++ +Y+ I+ ++ +
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQE 243
Query: 327 IDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 369
+D A + M + D+ TYSS++ LC+ +RL A + L
Sbjct: 244 LDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEML 290
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 172/358 (48%), Gaps = 6/358 (1%)
Query: 51 LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 110
L EM G P+V +YN+++ +L + DEA + M L P TFN+++NG
Sbjct: 3 LRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIING 62
Query: 111 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
LC++ + + + G+VP+ VTYN L+ G CK G A + E+ +G +PN
Sbjct: 63 LCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPN 122
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
+TYT+++ + +E M +G + Y T+I F + G L EA +
Sbjct: 123 VVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLN 182
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+M G IV+YN LIN +C G++E A LL +M +G D +++ +I G +
Sbjct: 183 EMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQ 242
Query: 291 NIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTY 345
+ A ++ +E + K + Y+ ++ L + ++ A ++F+ M D FTY
Sbjct: 243 ELDRAFQMKVEMIGKSVLPDAV-TYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTY 301
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+++++ CK L A L ++ G +++GL +EA+++ K+
Sbjct: 302 TTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKL 359
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 166/354 (46%), Gaps = 37/354 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C + +L M G+ PDVV+Y+++I+G RN L + + EM+
Sbjct: 199 LINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKS 258
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y+SL+ L + + EA +FQ+M+ L P T+ ++N CK + AL
Sbjct: 259 VLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKAL 318
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-C 180
+ + + GF+P+ VTYN+LI GL K R + AR +L +L P+A+TY T+++ C
Sbjct: 319 HLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENC 378
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C +E SA+ ++ F G + EA E M+ + +
Sbjct: 379 C--------NIEFKSAV-------------ALVKGFCMKGLMDEADQVFESMINKNHKPN 417
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
YN +I+ +C+ G + AY L EM D HT+ + L KA +G L
Sbjct: 418 EAIYNVIIHGHCRIGNVLKAYKLYKEM----VHVDFVPHTVTVLALVKALFTEGMDGEL- 472
Query: 301 YMNKIGFD-------SNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS 347
N++ D ++ E +V+ K+G +D N+ M KD S+
Sbjct: 473 --NEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEM-AKDGLIPST 523
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 105/202 (51%), Gaps = 4/202 (1%)
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
+GL M+R G + Y T+I + K+ R EA ++ M G++ +++++N +I
Sbjct: 1 MGLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMII 60
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
N C++G+L+ +L EM ++G+ D+ T+ L++G CK GN A + M + G
Sbjct: 61 NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLS 120
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
N+ Y +++ + K G ++ A+ F+ M V+ + TY+++++ + L A ++
Sbjct: 121 PNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180
Query: 365 LLSCLKSGVRILKSAQKAVVDG 386
L +SG A+++G
Sbjct: 181 LNEMTRSGFIPSIVTYNALING 202
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 176/369 (47%), Gaps = 4/369 (1%)
Query: 8 QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 67
F + D + NRM P V + L+ + S L L +M GIPPDV+
Sbjct: 89 HFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVY 148
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+ N L++ L + A V ++ P TFN ++ GLC AL +F
Sbjct: 149 TLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKT 208
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
GF P++VTY L+ GLCK G A +L+ + PN I Y TI+ ++R+
Sbjct: 209 IGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQV 268
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
+ S M KG + D F Y ++I A + K T + +MV + ++V ++T+
Sbjct: 269 TEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTV 328
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
++ CKEG + A+ ++D M K+G E D T+T L+DG C + A + M G
Sbjct: 329 VDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC 388
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASK 363
N+ +YN +++ + ++D A+ + E M ++ D+ TY++++H LC RL A
Sbjct: 389 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 448
Query: 364 LLLSCLKSG 372
L + SG
Sbjct: 449 LFHEMVASG 457
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 181/374 (48%), Gaps = 6/374 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+++C +++L ++ + G PD T+N+LI G + +L L D+ +
Sbjct: 152 ILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGE 211
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +Y +LM+ L ++G A R+ + M+ + P +N +++ LCK+R A
Sbjct: 212 GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEA 271
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G P++ TYN LI LC + +L E+ +S PN + ++T++
Sbjct: 272 FNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDA 331
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + +++ M ++G D Y ++ + EA + MV G +
Sbjct: 332 LCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPN 391
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ SYN LIN YC+ +++ A LL++M QG D T+ LI GLC G ++ A
Sbjct: 392 VRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFH 451
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G +L Y ++D L K+ + A+ + +++E D Y+ + +C+A
Sbjct: 452 EMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAG 511
Query: 357 RLPSASKLL--LSC 368
L +A L LSC
Sbjct: 512 ELEAARDLFSNLSC 525
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 192/406 (47%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ + + + ++ +M GI PDV T N LI L + +L ++L++G
Sbjct: 118 LLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLG 177
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD ++N+L+ L GK EA +F I P T+ ++NGLCK T A+
Sbjct: 178 CQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAI 237
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ R + + P ++ YN +I LCK ++ A + E+ G +P+ TY +++
Sbjct: 238 RLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHAL 297
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++K +L+ M + + TV+ A K G + A D ++ M+ GV+ D+
Sbjct: 298 CNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDV 357
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y L++ +C +++ A + D M +G + ++ ILI+G C+ + A LE
Sbjct: 358 VTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQ 417
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
M+ G ++ YN ++ L G++ HAI +F M ++ D TY ++ LCK
Sbjct: 418 MSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHH 477
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L A LL + S + +DG+ +G A+ + S +
Sbjct: 478 LAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNL 523
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 120/237 (50%), Gaps = 4/237 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI A C + T+LN M + I P+VV +++++ + +++ + D++D M++ G
Sbjct: 293 LIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRG 352
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ PDV +Y +LM HCL + DEA +VF M+ P ++NI++NG C+ + D
Sbjct: 353 VEPDVVTYTALMDGHCL--RSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDK 410
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+ + + G + + VTYN LI GLC GRL+ A + E+ SG P+ +TY ++
Sbjct: 411 AMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLD 470
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
+N + +L A++ D Y I + G L+ A D + G
Sbjct: 471 YLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQG 527
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 86/167 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D +C D + + M G P+V +YN LI G + + ++ LL++M G
Sbjct: 363 LMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQG 422
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D +YN+L+H L +G+ A +F +M+ P T+ I+L+ LCKN + A+
Sbjct: 423 LIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAM 482
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
+ + ++ +++ YNI I G+C+AG L AR + L G A
Sbjct: 483 VLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQGFA 529
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 103/201 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++DA C+ + +++ M + G+ PDVVTY +L+ G S + ++ + D M+ G
Sbjct: 328 VVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKG 387
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V SYN L++ Q+ + D+A + + M L T T+N +++GLC +A+
Sbjct: 388 CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAI 447
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + G +P+LVTY IL+ LCK L A +LK + S + + Y +
Sbjct: 448 ALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGM 507
Query: 182 FRNRKYKLGLEILSAMKRKGY 202
R + + ++ S + +G+
Sbjct: 508 CRAGELEAARDLFSNLSCQGF 528
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 210/442 (47%), Gaps = 39/442 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ ++ +RM+E G PDVVT+NSLI G + L L++EM
Sbjct: 193 IVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRS 252
Query: 61 GIPPDVWSYNSLMHCLFQLGKPD-----------------------------------EA 85
G DV +YN+L++C + G+ + EA
Sbjct: 253 GCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREA 312
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
++F M + T+ +++G CK D+A+ + + + G +VTY +L+ G
Sbjct: 313 MKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDG 372
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCK ++ A +L+ + +G N + YTT++ F N+ + L +LS MK KG D
Sbjct: 373 LCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELD 432
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y +I + +L EA + +M G++ + + Y T+++ K GK+ A +L
Sbjct: 433 ISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQ 492
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
++ GF+ + T+ LIDGLCKAG+I A H M +G D N++AY +VD L K+G
Sbjct: 493 KILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNG 552
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
++ A+ +F M K D Y++++ K L A L + SG+++
Sbjct: 553 CLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYT 612
Query: 382 AVVDGLRHSGCRREAKKIQSKI 403
+ G + EA+++ S++
Sbjct: 613 CFISGFCNLNMMPEAREVFSEM 634
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 182/391 (46%), Gaps = 4/391 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D ++ R+ E +P+V T+N +I + L+ + L M EMG PDV ++NSL
Sbjct: 170 DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSL 229
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ + G+ DE ++ ++M T+N ++N CK + A F +++ G
Sbjct: 230 IDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGV 289
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+ +VT++ + CK G +R A + ++ G A N TYT ++ + + +
Sbjct: 290 MANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIV 349
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+L M R+G + Y ++ K ++ EA D + M GV+ + + Y TLI+ +
Sbjct: 350 LLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHF 409
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
E A LL EM+ +G E D + LI GLC + A+ L M++ G + N
Sbjct: 410 MNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYI 469
Query: 313 AYNCIVDRLGKDGKIDHAI----NVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
Y ++D K GK+ AI + +S + TY +++ LCKA + A
Sbjct: 470 IYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKM 529
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
G+ A A+VDGL +GC EA ++
Sbjct: 530 RDLGLDPNVQAYTALVDGLCKNGCLNEAVQL 560
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 192/409 (46%), Gaps = 43/409 (10%)
Query: 35 NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 94
++L++ LL ++ + + E+ +PP+ + N H L +L + D + R+ + +
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCN---HILLRLAR-DRSGRLVRRLFE 181
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
P TFNI+++ LCK A +F +++ G +P++VT+N LI G K G L
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
+++E+ SG + +TY ++ C + + + +AMKR+G + + T +
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
AF K G ++EA QM G+ L+ +Y LI+ CK G+L+ A +LLDEM +QG
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
+ T+T+L+DGLCK + A L M K G +N Y ++ + + A+ +
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421
Query: 335 ESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL-------------------SCLKS 371
M+ K D Y +++ LC +L A LL +C KS
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481
Query: 372 G---------VRILKSAQK-------AVVDGLRHSGCRREAKKIQSKIR 404
G +IL S + A++DGL +G EA +K+R
Sbjct: 482 GKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMR 530
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 135/295 (45%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ +L M +AG+ + + Y +LI G N +L LL EM
Sbjct: 368 VLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNK 427
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ D+ Y +L+ L + K DEA + M L P + M++ K+ A
Sbjct: 428 GLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEA 487
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ M + + GF P ++TY LI GLCKAG + A ++ D G PN YT ++
Sbjct: 488 IAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDG 547
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+N +++ + M KG + D Y ++ ++K G L +A +M+ G+QLD
Sbjct: 548 LCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLD 607
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
+ Y I+ +C + A + EM G D+ + LI K GN++ A
Sbjct: 608 LFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEA 662
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 118/252 (46%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L+ M+ G+ D+ Y +LI G L + LL +M E G+ P+ Y ++M F
Sbjct: 420 LLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACF 479
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ GK EA + Q ++ P T+ +++GLCK D A+ F ++ G P +
Sbjct: 480 KSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQ 539
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
Y L+ GLCK G L A + E+ G + + + YT ++ + + + M
Sbjct: 540 AYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKM 599
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
G D F Y I+ F + + EA + +M+ G+ D YN LI+ Y K G L
Sbjct: 600 IDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNL 659
Query: 258 EAAYLLLDEMEK 269
E A L DEME+
Sbjct: 660 EEAISLQDEMER 671
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 277 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
+T I+ID LCK G + AR M ++G ++ +N ++D GK G++D + E
Sbjct: 189 FTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEE 248
Query: 337 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 392
M D TY+++++ CK R+ +A + + GV VD G
Sbjct: 249 MRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL 308
Query: 393 RREAKKIQSKIRM 405
REA K+ +++R+
Sbjct: 309 VREAMKLFAQMRV 321
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 202/407 (49%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ YC ++++M E G PD +T+ +LI G ++ S ++ L+D M++ G
Sbjct: 86 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 145
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P++ +Y +++ L + G D A + M + FN +++ LCK R+ D+AL
Sbjct: 146 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ ++ G P +VTY+ LI LC GR A +L ++ + PN +T+ ++
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 265
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K+ ++ M ++ D F Y ++I F RL +A E MV+ D+
Sbjct: 266 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL 325
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YNTLI +CK ++E L EM +G D T+T LI GL G+ A+ +
Sbjct: 326 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVK-DSFTYSSMVHNLCKAKR 357
M G ++ Y+ ++D L +GK++ A+ VF+ M E+K D + Y++M+ +CKA +
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 445
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ L S GV+ ++ GL +EA + K++
Sbjct: 446 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 179/353 (50%), Gaps = 4/353 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++ C+ D + +LN+M A I DVV +N++I + + +L+L EM
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+V +Y+SL+ CL G+ +A+++ DMI + P TFN +++ K A
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + K P++ TYN LI G C RL A+ + + + P+ TY T++K
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++++ + G E+ M +G D Y T+I G A +QMV+DGV D
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++Y+ L++ C GKLE A + D M+K + D Y +T +I+G+CKAG +
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
++ G N+ YN ++ L + A + + M+ + DS TY++++
Sbjct: 455 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 167/329 (50%), Gaps = 1/329 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + + +L+ M E I+P++VT+N+LI + + L D+M++
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+++YNSL++ + D+A ++F+ M+ D P T+N ++ G CK++ ++
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 345
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + G V + VTY LI+GL G A+ + K++ G P+ +TY+ ++
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N K + LE+ M++ D + Y T+I K G++ + D + GV+ ++
Sbjct: 406 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 465
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNT+I+ C + L+ AY LL +M++ G D T+ LI + G+ + +
Sbjct: 466 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 525
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
M F + + + L DG++D +
Sbjct: 526 MRSCRFVGDASTIGLVANML-HDGRLDKS 553
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 199/411 (48%), Gaps = 4/411 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + FD ++ +M+ GIS ++ TYN LI R S +S +L LL +M+++G
Sbjct: 16 LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 75
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + + +SL++ + +A + M+ P T TF +++GL + A+
Sbjct: 76 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P LVTY +++ GLCK G + A +L ++ + + + + TI+
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R L + M+ KG + Y ++I+ GR +A+ + M+ + ++
Sbjct: 196 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 255
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++N LI+ + KEGK A L D+M K+ + D +T+ LI+G C + A+ E+
Sbjct: 256 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 315
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M +L+ YN ++ K +++ +F M V D+ TY++++ L
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 375
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+A K+ + GV ++DGL ++G +A ++ ++ ++I
Sbjct: 376 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 177/376 (47%), Gaps = 6/376 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P + +N L++ + + L ++M +GI ++++YN L++C + + A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
M+ P T + +LNG C + +A+ + + + G+ P+ +T+ LI GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
+ A ++ + G PN +TY ++ + L +L+ M+ D
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
+ T+I + K + +A + ++M T G++ ++V+Y++LI+ C G+ A LL +M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 269 KQGFECDKYTHTILIDGLCKAGN-IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
++ + T LID K G ++ +LH + M K D ++ YN +++ ++
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLH-DDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 328 DHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
D A +FE M KD F TY++++ CK+KR+ ++L G+ +
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 384 VDGLRHSGCRREAKKI 399
+ GL H G A+K+
Sbjct: 367 IQGLFHDGDCDNAQKV 382
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 133/275 (48%), Gaps = 4/275 (1%)
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+P + +N L+ + K + + +++ G + N TY ++ C R + L L
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+L M + GY +++ + R+ +A ++QMV G + D +++ TLI+
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K A L+D M ++G + + T+ ++++GLCK G+I A L M ++++
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 368
+N I+D L K +D A+N+F+ ME K + TYSS++ LC R AS+LL
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++ + A++D G EA+K+ +
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 281
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 114/245 (46%), Gaps = 4/245 (1%)
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
P+ + ++ + +K+ L + + M+R G + + + Y +I F + ++ A
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+ +M+ G + IV+ ++L+N YC ++ A L+D+M + G+ D T T LI GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 344
A ++ M + G NL Y +V+ L K G ID A N+ ME D
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+++++ +LCK + + A L G+R +++ L G +A ++ S +
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 405 MAKIS 409
KI+
Sbjct: 248 EKKIN 252
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 89/183 (48%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D + +M G+ PD++TY+ L+ G N L +L++ D M + I D++ Y ++
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ + + GK D+ +F + + P T+N M++GLC R A + + +++ G
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+P+ TYN LI+ + G + +++E+ +A T + R K L+
Sbjct: 497 LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLD 556
Query: 193 ILS 195
+LS
Sbjct: 557 MLS 559
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ D G+ + + G+ P+VVTYN++I+G LL + LL +M E G
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM----ICGDLTPCTATFNIMLNGLCKNRYT 117
PD +YN+L+ + G + + ++M GD + N++ +G +
Sbjct: 496 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFL 555
Query: 118 D 118
D
Sbjct: 556 D 556
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 210/442 (47%), Gaps = 39/442 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ ++ +RM+E G PDVVT+NSLI G + L L++EM
Sbjct: 193 IVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRS 252
Query: 61 GIPPDVWSYNSLMHCLFQLGKPD-----------------------------------EA 85
G DV +YN+L++C + G+ + EA
Sbjct: 253 GCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREA 312
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
++F M + T+ +++G CK D+A+ + + + G +VTY +L+ G
Sbjct: 313 MKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDG 372
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCK ++ A +L+ + +G N + YTT++ F N+ + L +LS MK KG D
Sbjct: 373 LCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELD 432
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y +I + +L EA + +M G++ + + Y T+++ K GK+ A +L
Sbjct: 433 ISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQ 492
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
++ GF+ + T+ LIDGLCKAG+I A H M +G D N++AY +VD L K+G
Sbjct: 493 KILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNG 552
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
++ A+ +F M K D Y++++ K L A L + SG+++
Sbjct: 553 CLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYT 612
Query: 382 AVVDGLRHSGCRREAKKIQSKI 403
+ G + EA+++ S++
Sbjct: 613 CFISGFCNLNMMPEAREVFSEM 634
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 182/391 (46%), Gaps = 4/391 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D ++ R+ E +P+V T+N +I + L+ + L M EMG PDV ++NSL
Sbjct: 170 DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSL 229
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ + G+ DE ++ ++M T+N ++N CK + A F +++ G
Sbjct: 230 IDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGV 289
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+ +VT++ + CK G +R A + ++ G A N TYT ++ + + +
Sbjct: 290 MANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIV 349
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+L M R+G + Y ++ K ++ EA D + M GV+ + + Y TLI+ +
Sbjct: 350 LLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHF 409
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
E A LL EM+ +G E D + LI GLC + A+ L M++ G + N
Sbjct: 410 MNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYI 469
Query: 313 AYNCIVDRLGKDGKIDHAI----NVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
Y ++D K GK+ AI + +S + TY +++ LCKA + A
Sbjct: 470 IYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKM 529
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
G+ A A+VDGL +GC EA ++
Sbjct: 530 RDLGLDPNVQAYTALVDGLCKNGCLNEAVQL 560
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 192/409 (46%), Gaps = 43/409 (10%)
Query: 35 NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 94
++L++ LL ++ + + E+ +PP+ + N H L +L + D + R+ + +
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCN---HILLRLAR-DRSGRLVRRLFE 181
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
P TFNI+++ LCK A +F +++ G +P++VT+N LI G K G L
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
+++E+ SG + +TY ++ C + + + +AMKR+G + + T +
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
AF K G ++EA QM G+ L+ +Y LI+ CK G+L+ A +LLDEM +QG
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
+ T+T+L+DGLCK + A L M K G +N Y ++ + + A+ +
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421
Query: 335 ESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL-------------------SCLKS 371
M+ K D Y +++ LC +L A LL +C KS
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481
Query: 372 G---------VRILKSAQK-------AVVDGLRHSGCRREAKKIQSKIR 404
G +IL S + A++DGL +G EA +K+R
Sbjct: 482 GKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMR 530
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 135/295 (45%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ +L M +AG+ + + Y +LI G N +L LL EM
Sbjct: 368 VLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNK 427
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ D+ Y +L+ L + K DEA + M L P + M++ K+ A
Sbjct: 428 GLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEA 487
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ M + + GF P ++TY LI GLCKAG + A ++ D G PN YT ++
Sbjct: 488 IAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDG 547
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+N +++ + M KG + D Y ++ ++K G L +A +M+ G+QLD
Sbjct: 548 LCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLD 607
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
+ Y I+ +C + A + EM G D+ + LI K GN++ A
Sbjct: 608 LFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEA 662
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 118/252 (46%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L+ M+ G+ D+ Y +LI G L + LL +M E G+ P+ Y ++M F
Sbjct: 420 LLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACF 479
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ GK EA + Q ++ P T+ +++GLCK D A+ F ++ G P +
Sbjct: 480 KSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQ 539
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
Y L+ GLCK G L A + E+ G + + + YT ++ + + + M
Sbjct: 540 AYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKM 599
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
G D F Y I+ F + + EA + +M+ G+ D YN LI+ Y K G L
Sbjct: 600 IDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNL 659
Query: 258 EAAYLLLDEMEK 269
E A L DEME+
Sbjct: 660 EEAISLQDEMER 671
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 277 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
+T I+ID LCK G + AR M ++G ++ +N ++D GK G++D + E
Sbjct: 189 FTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEE 248
Query: 337 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 392
M D TY+++++ CK R+ +A + + GV VD G
Sbjct: 249 MRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL 308
Query: 393 RREAKKIQSKIRM 405
REA K+ +++R+
Sbjct: 309 VREAMKLFAQMRV 321
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 204/411 (49%), Gaps = 8/411 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ + + D Y+ + M + GI PDVVTYNS+IA + + ++++L+ M++ G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +YNS++H G+P EA + M + P T++++++ LCKN A
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + K G PE+ TY L++G G L +L + +G P+ + +I+ C
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVF-SILICA 380
Query: 182 FRNR-KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ N+ K + + S M+++G + Y VI K GR+++A Y EQM+ +G+
Sbjct: 381 YANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 440
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ YN+LI+ C K E A L+ EM +G + +ID CK G + + E
Sbjct: 441 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE 500
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
M +IG N+ YN +++ GK+D A+ + M ++ TYS++++ CK
Sbjct: 501 LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS 560
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
R+ A L SGV ++ GL + RR A + +R+ +
Sbjct: 561 RMEDALVLFKEMESSGVSPDIITYNIILQGLFQT--RRTAAAKELYVRITE 609
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 199/396 (50%), Gaps = 7/396 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE---MGIPPDVWSY 69
DA +L RM E G P+V +YN L+ G + +L+LL M + G PPDV SY
Sbjct: 140 DAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
++++ F+ G D+A + +M+ + P T+N ++ LCK + D A+ + + K
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVK 259
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
+G +P+ +TYN ++ G C +G+ + A LK++ G P+ +TY+ +M +N +
Sbjct: 260 NGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCME 319
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+I +M ++G + Y T++ + G L E ++ MV +G+ D ++ LI
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
Y +GK++ A L+ +M +QG + T+ +I LCK+G ++ A L+ E M G
Sbjct: 380 AYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
YN ++ L K + A + M + ++ ++S++ + CK R+ + KL
Sbjct: 440 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 499
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
++ GV+ +++G +G EA K+ S
Sbjct: 500 ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLS 535
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 203/437 (46%), Gaps = 39/437 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I A C+ + D +LN M + G+ PD +TYNS++ G + ++ L +M G
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML------------- 108
+ PDV +Y+ LM L + G+ EA ++F M L P T+ +L
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 356
Query: 109 --------NGLCKNRYT--------------DNALRMFRGLQKHGFVPELVTYNILIKGL 146
NG+ + Y D A+ +F +++ G P VTY +I L
Sbjct: 357 GLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL 416
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK+GR+ A +++ D G +P I Y +++ K++ E++ M +G +
Sbjct: 417 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 476
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ ++I + K GR+ E+ E MV GV+ ++++YNTLIN YC GK++ A LL
Sbjct: 477 IFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSG 536
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M G + + T++ LI+G CK ++ A + + M G ++ YN I+ L + +
Sbjct: 537 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 596
Query: 327 IDHA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
A + + ES + TY+ ++H LCK K A ++ + +++
Sbjct: 597 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 656
Query: 383 VVDGLRHSGCRREAKKI 399
++D L G EAK +
Sbjct: 657 MIDALLKVGRNDEAKDL 673
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 188/435 (43%), Gaps = 51/435 (11%)
Query: 14 AGYTILNRMREAG---ISPDVVTYNSLIAGATRNSLL----------------------- 47
A + NRM AG ++PD+ TY LI R L
Sbjct: 67 AAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFT 126
Query: 48 ------------SCSLDL-LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI- 93
S ++D+ L M E+G P+V+SYN L+ L + EA + M
Sbjct: 127 PLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMAD 186
Query: 94 --CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
G P ++ ++NG K +D A + + G +P++VTYN +I LCKA
Sbjct: 187 DRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQA 246
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
+ A +L + +G P+ +TY +I+ + + K + L M+ G D Y
Sbjct: 247 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSL 306
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
++ K GR EA + M G++ +I +Y TL+ Y +G L + LLD M + G
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
D Y +ILI G + A L M + G + N Y ++ L K G+++ A+
Sbjct: 367 IHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426
Query: 332 NVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
FE M + Y+S++H LC + A +L+L L G+ + +++D
Sbjct: 427 LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIID-- 484
Query: 388 RHSGCRREAKKIQSK 402
S C +E + I+S+
Sbjct: 485 --SHC-KEGRVIESE 496
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 181/397 (45%), Gaps = 43/397 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI AY D + ++MR+ G++P+ VTY ++I ++ + ++ ++M++
Sbjct: 376 ILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 435
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P YNSL+H L K + A + +M+ + T FN +++ CK +
Sbjct: 436 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES 495
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F + + G P ++TYN LI G C AG++ A +L + G PN +TY+T++
Sbjct: 496 EKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLIN- 554
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
GYC KI R+++A ++M + GV D
Sbjct: 555 ---------------------------GYC-------KISRMEDALVLFKEMESSGVSPD 580
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++YN ++ + + AA L + + G + + T+ I++ GLCK + L +
Sbjct: 581 IITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK-NKLTDDALQM- 638
Query: 301 YMNKIGFDSNLEA--YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 354
+ N D LEA +N ++D L K G+ D A ++F + V + +TY M N+
Sbjct: 639 FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 698
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
L +L LS +G + +V L G
Sbjct: 699 QGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 735
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 151/333 (45%), Gaps = 14/333 (4%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI---CGDLTPCTATFNIMLN 109
+ DE+L G ++ N + + + P A + M ++TP T+ I++
Sbjct: 37 VFDELLRRGRGASIYGLNRALADVAR-DSPAAAVSRYNRMARAGADEVTPDLCTYGILIG 95
Query: 110 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR-WILKELGDSGHA 168
C+ D + K GF + + + L+KGLC R A +L+ + + G
Sbjct: 96 CCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 155
Query: 169 PNAITYTTIMK-CCFRNRKYKLGLEILSAM---KRKGYTFDGFGYCTVIAAFVKIGRLKE 224
PN +Y ++K C NR + LE+L M + G D Y TVI F K G +
Sbjct: 156 PNVFSYNILLKGLCDENRSQE-ALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDK 214
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A +M+ G+ D+V+YN++I CK ++ A +L+ M K G D T+ ++
Sbjct: 215 AYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 274
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 340
G C +G K A L+ M G + ++ Y+ ++D L K+G+ A +F+SM +
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ TY +++ L LL +++G+
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 102/240 (42%), Gaps = 35/240 (14%)
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
P+ TY ++ CC R + LG L + +KG+ D + ++ R +A D
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 229 MEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ---GFECDKYTHTILID 284
+ + +T+ G ++ SYN L+ C E + + A LL M G D ++T +I+
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT 344
G K G+ D Y+ ++DR + D T
Sbjct: 205 GFFKEGD---------------SDKAYSTYHEMLDR----------------GILPDVVT 233
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
Y+S++ LCKA+ + A ++L + +K+GV +++ G SG +EA K+R
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR 293
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/239 (18%), Positives = 90/239 (37%), Gaps = 45/239 (18%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC+ + + M +G+SPD++TYN ++ G + + + +L + E G
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611
Query: 62 IPPDVWSYNSLMH-----------------------------------CLFQLGKPDEAN 86
++ +YN ++H L ++G+ DEA
Sbjct: 612 TQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAK 671
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+F L P T+ +M + + ++F ++ +G + N +++ L
Sbjct: 672 DLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVREL 731
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC----------FRNRKYKLGLEILS 195
+ G + A L + + + A T + + F KYK +E LS
Sbjct: 732 LQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKYQEYYRFLPEKYKSFIESLS 790
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 207/412 (50%), Gaps = 6/412 (1%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
I+A+C+ + + M + G+SP+VVTYN+LI G ++ L + ++M++ G+
Sbjct: 320 INAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGV 379
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
+ +Y+ L++ L +L K +EAN V ++ + TP +N +++G CK +ALR
Sbjct: 380 NATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALR 439
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ + G P VT N +I+G CK G++ A IL+E+ G + N +TTI+
Sbjct: 440 IRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLC 499
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
N +++ L L M + + T++ K G+ +A + +++ G ++V
Sbjct: 500 MNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLV 559
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEY 301
+ N LI+ CK G ++ A LL +M ++GF DK T+ LI G CK G + +G +L E
Sbjct: 560 TTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGE- 618
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKR 357
M K G + + YN ++ + + GK+D A+N++ + +D +TY M+ CKA +
Sbjct: 619 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADK 678
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+ KL L + + ++ +G EA K+ +R I
Sbjct: 679 IEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIP 730
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 202/435 (46%), Gaps = 39/435 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ + I M GI+P+ VT NS+I G + + + +L+EML G
Sbjct: 424 LIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG 483
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ ++ +++H L + + A R ++M+ ++ P ++ GLCK +A+
Sbjct: 484 FSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAV 543
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ L + GF LVT N LI GLCK G ++ A +LK++ + G + ITY T++ C
Sbjct: 544 ELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGC 603
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT--------------- 226
+ K + G ++ M ++G D F Y +I +IG+L EA
Sbjct: 604 CKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNV 663
Query: 227 -------------DYME-------QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
D +E +++T ++L+ V YNTLI YC+ G A+ L D+
Sbjct: 664 YTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDD 723
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M +G T++ LI G+C G ++ A+ ++ M K G N+ Y ++ K G+
Sbjct: 724 MRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQ 783
Query: 327 IDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+D +NV + M D TY+ M+ K+ + +A+KLL + G+
Sbjct: 784 MDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNV 843
Query: 383 VVDGLRHSGCRREAK 397
+ +G G E K
Sbjct: 844 LTNGFCKEGKIEEGK 858
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 188/407 (46%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + D + +M + G++ ++TY+ LI G + + + +L E LE G
Sbjct: 354 LIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKG 413
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ YN+L+ ++G +A R+ DM+ + P + T N ++ G CK + A
Sbjct: 414 FTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAE 473
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + GF + +I LC R +A L+E+ PN TT++
Sbjct: 474 CILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGL 533
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K+ +E+ + KG+ + +I K G ++EA +++M+ G LD
Sbjct: 534 CKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDK 593
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YNTLI+ CKEGK+E + L EM KQG E D +T+ +LI G+C+ G + A
Sbjct: 594 ITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNE 653
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
N+ Y ++D K KI+ +F + + +S Y++++ C+
Sbjct: 654 CKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGN 713
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
A KL G+ + +++ G+ + G +AK + ++R
Sbjct: 714 TVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMR 760
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 161/324 (49%), Gaps = 6/324 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + +L +M E G D +TYN+LI+G + + L EM++ G
Sbjct: 564 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 623
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD ++YN L+H + ++GK DEA ++ + DL P T+ +M++G CK +
Sbjct: 624 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGE 683
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F L V YN LI+ C+ G A + ++ G P TY++++
Sbjct: 684 KLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGM 743
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + ++ M+++G + Y +I + K+G++ + + +++M + + +
Sbjct: 744 CNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNK 803
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y +I+ Y K G ++ A LL EM +G D T+ +L +G CK G I+ +L E
Sbjct: 804 ITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAE- 862
Query: 302 MNKIGFDSNL----EAYNCIVDRL 321
+ +GF+S L EA+ R+
Sbjct: 863 -DGVGFNSPLFLIHEAFRACTRRV 885
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 182/386 (47%), Gaps = 15/386 (3%)
Query: 19 LNRMREAGISPDVVTYNSLI---AGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
LN + E+G++ V + LI RN ++ + + G+ P V + L+
Sbjct: 231 LNEVGESGVA--VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSS 288
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
L + + +++ VF+ M G ++P F+ +N CK ++A+++F ++K G P
Sbjct: 289 LVKANELEKSYWVFETMRQG-VSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPN 347
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
+VTYN LI GLCK G L A +++ G ITY+ ++ + K+ +L
Sbjct: 348 VVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLK 407
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
KG+T + Y T+I + K+G L +A MV+ G+ + V+ N++I +CK G
Sbjct: 408 ETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIG 467
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
++E A +L+EM +GF + T +I LC + A L M N
Sbjct: 468 QMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLT 527
Query: 316 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
+V L K+GK A+ ++ + K + T ++++H LCK + A +LL L+
Sbjct: 528 TLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLER 587
Query: 372 GVRILKSAQKAVVDGLRHSGCRREAK 397
G + K ++ SGC +E K
Sbjct: 588 GFVLDKITYNTLI-----SGCCKEGK 608
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 35/266 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ D + N + + P+V TY +I G + + L E+L
Sbjct: 633 LLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQ 692
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ + YN+L+ + G EA ++ DM + P TAT++ +++G+C ++A
Sbjct: 693 NLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDA 752
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++K G +P +V Y LI G CK G++ +L+E+ PN ITYT ++
Sbjct: 753 KCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMI-- 810
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
DG+ K G +K A + +MV G+ D
Sbjct: 811 ------------------------DGYS---------KSGDMKTAAKLLHEMVGKGIVPD 837
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDE 266
V+YN L N +CKEGK+E LL ++
Sbjct: 838 TVTYNVLTNGFCKEGKIEEGKLLAED 863
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 202/394 (51%), Gaps = 7/394 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE---MGIPPDVWSY 69
DA +L RM E G PDV +YN+L+ G + +L+LL M + G PPDV SY
Sbjct: 145 DAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 204
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N++++ F+ G D+A + +M+ + P T++ ++ LCK + D A+ + + K
Sbjct: 205 NTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVK 264
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
+G +P+ +TYN ++ G C +G+ + A LK++ G PN +TY+++M +N +
Sbjct: 265 NGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE 324
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+I +M ++G D Y T++ + G L E ++ MV +G+Q D +N LI
Sbjct: 325 ARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILIC 384
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
Y K+ K++ A L+ +M + G + + +ID LCK+G++ A L+ E M G
Sbjct: 385 AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP 444
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
N+ Y ++ L K D A + M + ++ ++S++ + CK R+ + KL
Sbjct: 445 NIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 504
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
++ GV+ ++DG +G EA K+
Sbjct: 505 DLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKL 538
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 191/395 (48%), Gaps = 4/395 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D Y+ + M + GI PDVVTY+S+IA + + ++++L+ M++ G+ PD +YNS+
Sbjct: 218 DKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 277
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+H G+P EA + M + P T++ ++N LCKN + A ++F + K G
Sbjct: 278 LHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGL 337
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P++ TY L++G G L +L + +G P+ + ++ + K +
Sbjct: 338 EPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAML 397
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ S M++ G + Y TVI K G + +A Y EQM+ +G+ +I+ Y +LI+ C
Sbjct: 398 VFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLC 457
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K + A L+ EM +G + +ID CK G + + + M +IG ++
Sbjct: 458 TCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 517
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
YN ++D GK+D A + SM D TY ++++ C+ R+ A L
Sbjct: 518 TYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEM 577
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ SGV ++ GL H+ AK++ I
Sbjct: 578 VSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI 612
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 196/411 (47%), Gaps = 15/411 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL-LDEMLE 59
+LI C+ D G+ L + + G D +T+ L+ G + S ++D+ L M E
Sbjct: 97 ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI---CGDLTPCTATFNIMLNGLCKNRY 116
+G PDV+SYN+L+ L + EA + M G P ++N +LNG K
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGD 216
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
+D A + + G +P++VTY+ +I LCKA + A +L + +G P+ +TY +
Sbjct: 217 SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 276
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
I+ + + K + L M+ G + Y +++ K GR EA + M G
Sbjct: 277 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 336
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
++ DI +Y TL+ Y +G L + LLD M + G + D + ILI K + A
Sbjct: 337 LEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAM 396
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHN 351
L M + G + N+ Y ++D L K G +D A+ FE M + + T Y+S++H
Sbjct: 397 LVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQM-IDEGLTPNIIVYTSLIHG 455
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 402
LC + A +L+L L G+ + +++D S C +E + I+S+
Sbjct: 456 LCTCDKWDKAEELILEMLDRGICLNTIFFNSIID----SHC-KEGRVIESE 501
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 198/437 (45%), Gaps = 39/437 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I A C+ + D +LN M + G+ PD +TYNS++ G + ++ L +M G
Sbjct: 242 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDG 301
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT------------------ 103
+ P+V +Y+SLM+ L + G+ EA ++F M L P AT
Sbjct: 302 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMH 361
Query: 104 -----------------FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
FNI++ K D A+ +F +++HG P +V Y +I L
Sbjct: 362 ALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVL 421
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK+G + A +++ D G PN I YT+++ K+ E++ M +G +
Sbjct: 422 CKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNT 481
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ ++I + K GR+ E+ + MV GV+ DI++YNTLI+ C GK++ A LL
Sbjct: 482 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLAS 541
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M G + D T+ LI+G C+ + A + M G N+ YN I+ L +
Sbjct: 542 MVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 601
Query: 327 IDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
A ++ S+ + TY+ ++H LCK A ++ + + +++
Sbjct: 602 TAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 661
Query: 383 VVDGLRHSGCRREAKKI 399
++ L G EAK +
Sbjct: 662 MIGALLKCGRMDEAKDL 678
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 179/378 (47%), Gaps = 43/378 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI AY + D + ++MR+ G++P+VV Y ++I ++ + ++ ++M++
Sbjct: 381 ILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDE 440
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P++ Y SL+H L K D+A + +M+ + T FN +++ CK +
Sbjct: 441 GLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES 500
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F + + G P+++TYN LI G C AG++ A +L + G P+ +TY T++
Sbjct: 501 EKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLIN- 559
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
GYC ++ R+ +A ++MV+ GV +
Sbjct: 560 ---------------------------GYC-------RVSRMDDALALFKEMVSSGVSPN 585
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++YN ++ + AA L + K G + + T+ I++ GLCK N+ L +
Sbjct: 586 IITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCK-NNLTDEALRM- 643
Query: 301 YMNKIGFDSNLE--AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 354
+ N D LE +N ++ L K G++D A ++F + V D TYS M NL +
Sbjct: 644 FQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIE 703
Query: 355 AKRLPSASKLLLSCLKSG 372
L L LS ++G
Sbjct: 704 QGSLEELDDLFLSMEENG 721
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 154/347 (44%), Gaps = 37/347 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ S D +M + G++P+++ Y SLI G + +L+ EML+ G
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I + +NS++ + G+ E+ ++F M+ + P T+N +++G C D A
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 536
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + G P++VTY LI G C+ R+ A + KE+ SG +PN ITY I++
Sbjct: 537 KLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 596
Query: 182 FRNRKYKLGLEILSAMKRKG-------YTFDGFGYC------------------------ 210
F R+ E+ ++ + G Y G C
Sbjct: 597 FHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 656
Query: 211 ----TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+I A +K GR+ EA D +G+ D+ +Y+ + ++G LE L
Sbjct: 657 RTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLS 716
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
ME+ G D ++ L + G+I A +L +++ F +LEA
Sbjct: 717 MEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHF--SLEA 761
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 153/334 (45%), Gaps = 14/334 (4%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI---CGDLTPCTATFNIMLN 109
+ DE+L G ++ N + + + P A + M G +TP T+ I++
Sbjct: 42 VFDELLRRGRGASIYGLNRALADVAR-HSPAAAVSRYNRMARAGAGKVTPTVHTYAILIG 100
Query: 110 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHA 168
C+ D + K GF + +T+ L+KGLC R A +L+ + + G
Sbjct: 101 CCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 160
Query: 169 PNAITYTTIMK-CCFRNRKYKLGLEILSAM---KRKGYTFDGFGYCTVIAAFVKIGRLKE 224
P+ +Y ++K C NR + LE+L M + G D Y TV+ F K G +
Sbjct: 161 PDVFSYNNLLKGLCDENRSQE-ALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDK 219
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A +M+ G+ D+V+Y+++I CK ++ A +L+ M K G D T+ ++
Sbjct: 220 AYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 279
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 340
G C +G K A L+ M G + N+ Y+ +++ L K+G+ A +F+SM +
Sbjct: 280 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEP 339
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
D TY +++ L LL +++G++
Sbjct: 340 DIATYRTLLQGYATKGALVEMHALLDLMVRNGIQ 373
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 101/241 (41%), Gaps = 37/241 (15%)
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
P TY ++ CC R + LG L + +KG+ D + ++ R +A D
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149
Query: 229 MEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
+ + +T+ G D+ SYN L+ C E + + A LL M
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADD----------------- 192
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSF 343
+G G ++ +YN +++ K+G D A + + M + D
Sbjct: 193 -----RGG----------GSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVV 237
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
TYSS++ LCKA+ + A ++L + +K+GV +++ G SG +EA K+
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM 297
Query: 404 R 404
R
Sbjct: 298 R 298
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 176/369 (47%), Gaps = 4/369 (1%)
Query: 8 QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 67
F + D + NRM P V + L+ + S L L +M GIPPDV+
Sbjct: 127 HFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVY 186
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+ N L++ L + A V ++ P TFN ++ GLC AL +F
Sbjct: 187 TLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKT 246
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
GF P++VTY L+ GLCK G A +L+ + PN I Y TI+ ++R+
Sbjct: 247 IGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQV 306
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
+ S M KG + D F Y ++I A + K T + +MV + ++V ++T+
Sbjct: 307 TEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTV 366
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
++ CKEG + A+ ++D M K+G E D T+T L+DG C + A + M G
Sbjct: 367 VDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC 426
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASK 363
N+ +YN +++ + ++D A+ + E M ++ D+ TY++++H LC RL A
Sbjct: 427 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 486
Query: 364 LLLSCLKSG 372
L + SG
Sbjct: 487 LFHEMVASG 495
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 193/407 (47%), Gaps = 4/407 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+++C +++L ++ + G PD T+N+LI G + +L L D+ +
Sbjct: 190 ILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGE 249
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +Y +LM+ L ++G A R+ + M+ + P +N +++ LCK+R A
Sbjct: 250 GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEA 309
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G P++ TYN LI LC + +L E+ +S PN + ++T++
Sbjct: 310 FNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDA 369
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + +++ M ++G D Y ++ + EA + MV G +
Sbjct: 370 LCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPN 429
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ SYN LIN YC+ +++ A LL++M QG D T+ LI GLC G ++ A
Sbjct: 430 VRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFH 489
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G +L Y ++D L K+ + A+ + +++E D Y+ + +C+A
Sbjct: 490 EMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAG 549
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L +A L + G++ ++ GL G EA K+ K+
Sbjct: 550 ELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKM 596
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 189/403 (46%), Gaps = 4/403 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ + A +L M + P+V+ YN++I ++ ++ + +L EM+ G
Sbjct: 261 LMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKG 320
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+++YNSL+H L L + + +M+ + P F+ +++ LCK A
Sbjct: 321 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAH 380
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K G P++VTY L+ G C + A + + G PN +Y ++
Sbjct: 381 DVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGY 440
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ + +L M +G D Y T+I +GRL+ A +MV G D+
Sbjct: 441 CQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDL 500
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y L++ CK L A +LL +E + D + I IDG+C+AG ++ AR
Sbjct: 501 VTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSN 560
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
++ G ++ YN ++ L K G +D A +F M+ +D Y++++ ++
Sbjct: 561 LSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNE 620
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 400
A++LL L G S +V+ L G + ++++
Sbjct: 621 TFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDGLDQSFERLR 663
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 192/406 (47%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ + + + ++ +M GI PDV T N LI L + +L ++L++G
Sbjct: 156 LLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLG 215
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD ++N+L+ L GK EA +F I P T+ ++NGLCK T A+
Sbjct: 216 CQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAI 275
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ R + + P ++ YN +I LCK ++ A + E+ G +P+ TY +++
Sbjct: 276 RLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHAL 335
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++K +L+ M + + TV+ A K G + A D ++ M+ GV+ D+
Sbjct: 336 CNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDV 395
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y L++ +C +++ A + D M +G + ++ ILI+G C+ + A LE
Sbjct: 396 VTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQ 455
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
M+ G ++ YN ++ L G++ HAI +F M ++ D TY ++ LCK
Sbjct: 456 MSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHH 515
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L A LL + S + +DG+ +G A+ + S +
Sbjct: 516 LAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNL 561
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 195/402 (48%), Gaps = 4/402 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ + + D Y+ N M + ISP+VVTYNS+IA + + ++++L M++ G
Sbjct: 94 VINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 153
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +YNS++H G+P EA + M + P T+N +++ LCKN A
Sbjct: 154 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 213
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + K G PE+ TY L++G G L +L + +G PN ++ ++
Sbjct: 214 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 273
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + + + S M+++G + Y VI K GR+++A Y EQM+ +G+
Sbjct: 274 AKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 333
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ YN+LI+ C K E A L+ EM +G + +ID CK G + + +
Sbjct: 334 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 393
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M +IG ++ Y+ ++D GK+D A + SM D TYS++++ CK R
Sbjct: 394 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISR 453
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ A L SGV ++ GL + AK++
Sbjct: 454 MKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 495
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 203/437 (46%), Gaps = 39/437 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I A C+ + D +L M ++G+ PD +TYNS++ G + ++ L +M G
Sbjct: 129 IIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDG 188
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML------------- 108
+ PDV +YNSLM L + G+ EA ++F M L P T+ +L
Sbjct: 189 VEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 248
Query: 109 --------NGLCKNRYT--------------DNALRMFRGLQKHGFVPELVTYNILIKGL 146
NG+ N Y + A+ +F +++ G P VTY +I L
Sbjct: 249 GLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGIL 308
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK+GR+ A +++ D G +P I Y +++ K++ E++ M +G +
Sbjct: 309 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 368
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ ++I + K GR+ E+ + MV GV+ DI++Y+TLI+ YC GK++ A LL
Sbjct: 369 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLAS 428
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M G + D T++ LI+G CK +K A + M G ++ YN I+ L + +
Sbjct: 429 MVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRR 488
Query: 327 IDHA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
A + + +S + TY+ ++H LCK K A ++ + +++
Sbjct: 489 TAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNI 548
Query: 383 VVDGLRHSGCRREAKKI 399
++D L G EAK +
Sbjct: 549 MIDALLKVGRNDEAKDL 565
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 195/388 (50%), Gaps = 7/388 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHC 75
+ + + GI PDV +YN L+ G + +L+LL M + G PPDV SY+++++
Sbjct: 39 VFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
F+ G D+ + +M+ ++P T+N ++ LCK + D A+ + + K G +P+
Sbjct: 98 FFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 157
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
+TYN ++ G C +G+ + A LK++ G P+ +TY ++M +N + +I
Sbjct: 158 CMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD 217
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
+M ++G + Y T++ + G L E ++ MV +G+ + ++ L+ Y K+
Sbjct: 218 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQE 277
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
K+E A L+ +M +QG + T+ +I LCK+G ++ A L+ E M G YN
Sbjct: 278 KVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYN 337
Query: 316 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++ L K + A + M + ++ ++S++ + CK R+ + KL ++
Sbjct: 338 SLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 397
Query: 372 GVRILKSAQKAVVDGLRHSGCRREAKKI 399
GV+ ++DG +G EA K+
Sbjct: 398 GVKPDIITYSTLIDGYCLAGKMDEATKL 425
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 182/397 (45%), Gaps = 43/397 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ AY + + + ++MR+ G++P+ VTY ++I ++ + ++ ++M++
Sbjct: 268 ILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 327
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P YNSL+H L K + A + +M+ + T FN +++ CK +
Sbjct: 328 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES 387
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F + + G P+++TY+ LI G C AG++ A +L + G P+ +TY+T++
Sbjct: 388 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLIN- 446
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
GYC KI R+K+A +M + GV D
Sbjct: 447 ---------------------------GYC-------KISRMKDALVLFREMESSGVSPD 472
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++YN ++ + + AA L + K G + + T+ I++ GLCK + L +
Sbjct: 473 IITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCK-NKLTDDALRM- 530
Query: 301 YMNKIGFDSNLEA--YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 354
+ N D LEA +N ++D L K G+ D A ++F + V + +TY M N+
Sbjct: 531 FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 590
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
L +L LS +G + +V L G
Sbjct: 591 QGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 627
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 78/153 (50%), Gaps = 7/153 (4%)
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD--SNLEAYN 315
E A + DE+ ++G D +++ IL++GLC + A L M G D ++ +Y+
Sbjct: 34 EDARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 316 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
+++ K+G +D + + M + + TY+S++ LCKA+ + A ++L + +KS
Sbjct: 93 TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152
Query: 372 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
GV ++V G SG +EA K+R
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMR 185
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 91/239 (38%), Gaps = 45/239 (18%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG--------------------- 40
LI+ YC+ + M +G+SPD++TYN ++ G
Sbjct: 444 LINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSG 503
Query: 41 -----ATRNSLLS--CSLDLLDEMLEM-------GIPPDVWSYNSLMHCLFQLGKPDEAN 86
+T N +L C L D+ L M + + ++N ++ L ++G+ DEA
Sbjct: 504 RQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAK 563
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+F L P T+ +M + + ++F ++ +G + N +++ L
Sbjct: 564 DLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVREL 623
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC----------FRNRKYKLGLEILS 195
+ G + A L + + + A T + + F KYK +E LS
Sbjct: 624 LQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKYQEYHRFLPEKYKSFIESLS 682
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 200/405 (49%), Gaps = 6/405 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ CQ D + N E G+ P++V N+L+ G ++ L+ +L L++EM E G
Sbjct: 361 LINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENG 420
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+W+YN +++ L ++G +A+ + D I P TFN +++G CK DNA+
Sbjct: 421 CSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAI 480
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + HG P+++TYN ++ GLCKAG+ K + + G PN ITY + +
Sbjct: 481 EIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESF 540
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD- 240
+ RK + L ++ M+ KG T D + T++ F G L A ++ V + +
Sbjct: 541 CKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKR-VDEQYKFSH 599
Query: 241 -IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
I +YN +IN + + + A L ++M + GF D YT+ ++IDG CK GNI L
Sbjct: 600 TIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFL 659
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA-KRL 358
+ G +L + +++ L ++ A+ + M K +V+ + +A K+
Sbjct: 660 LVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKG--IVPEVVNTIFEADKKE 717
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+A K+++ L I A + + DG+R R+ K+
Sbjct: 718 VAAPKIVVENLMKKGHITYFAYEILHDGIRDKKLSRKKLPTSQKV 762
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 198/396 (50%), Gaps = 42/396 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTY---------------------NSLIAG 40
+++ ++ FD + + RMR+ GI PDV T+ N G
Sbjct: 117 IMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQG 176
Query: 41 ATRNSLLSCSL--------------DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
+++ C++ +L +EML +GI PD+ ++N L+H L + G E+
Sbjct: 177 CESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESE 236
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
R+ ++ ++P T NI + G C+ + A+R+ G+ + G P+++TYN LI GL
Sbjct: 237 RLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGL 295
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK ++ A L+++ + G+ P+ TY +I+ + + +IL KG+ D
Sbjct: 296 CKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDE 355
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
YC++I + G + A + + + G++ ++V NTL+ ++G + A L++E
Sbjct: 356 STYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNE 415
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M + G D +T+ ++I+GLCK G + A L ++ + K G ++ +N ++D K
Sbjct: 416 MSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAK-GHLPDVFTFNTLIDGYCKKL 474
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
K+D+AI + + M D TY+S+++ LCKA +
Sbjct: 475 KLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGK 510
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 183/368 (49%), Gaps = 5/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ +LN++ + G+SP++ T N I G + ++L+ ++ LLD + G
Sbjct: 222 LIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDG-VGRG 280
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +YN+L+ L + K EA + M+ P T+N +++G CK NA
Sbjct: 281 LTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNAD 340
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ R GFVP+ TY LI GLC+ G + A + E + G PN + T++K
Sbjct: 341 QILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGL 400
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ L++++ M G + D + Y VI KIG + +A + + + G D+
Sbjct: 401 SQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDV 460
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++NTLI+ YCK+ KL+ A ++D M G D T+ +++GLCKAG + +
Sbjct: 461 FTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKL 520
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M + G N+ YN + + K K++ A+N+ E M+ K D + +++ C
Sbjct: 521 MMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGD 580
Query: 358 LPSASKLL 365
L A +L
Sbjct: 581 LDGAYQLF 588
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 150/328 (45%), Gaps = 5/328 (1%)
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
GK EA VF+ M + P ++N ++N L + RY D A +++ ++ G VP++ T+
Sbjct: 90 GKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTF 149
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
I +K C+ R AR +L + G +A+ Y T++ + E+ M
Sbjct: 150 TIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLG 209
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
G D + +I + G ++E+ + +++ GV ++ + N I +C+ L
Sbjct: 210 LGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNE 269
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A LLD + + G D T+ LI GLCK + A +L M G++ + YN I+D
Sbjct: 270 AIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIID 328
Query: 320 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
K G + +A + V D TY S+++ LC+ + A + ++ G++
Sbjct: 329 GYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKP 388
Query: 376 LKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+V GL G +A K+ +++
Sbjct: 389 NLVLCNTLVKGLSQQGLILQALKLMNEM 416
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 34/201 (16%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L +++C+ + ++ M+ G++PDVV + +L+ G N L +
Sbjct: 535 ILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGA---------- 584
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+QL K + F I AT+NIM+N + A
Sbjct: 585 ----------------YQLFKRVDEQYKFSHTI--------ATYNIMINAFAGKLNMNMA 620
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F + ++GF P+ TY ++I G CK G + + L + G P+ T+ ++ C
Sbjct: 621 EKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNC 680
Query: 181 CFRNRKYKLGLEILSAMKRKG 201
R+ + I+ M KG
Sbjct: 681 LCLKRRVHEAVGIIHLMVHKG 701
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 61/145 (42%), Gaps = 18/145 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+A+ ++ + + N+M E G SPD TY +I G + ++ L +E
Sbjct: 606 IMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEK 665
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P + ++ +++CL + EA + M+ + P
Sbjct: 666 GLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVVN----------------- 708
Query: 121 LRMFRGLQKHGFVPELVTYNILIKG 145
+F +K P++V N++ KG
Sbjct: 709 -TIFEADKKEVAAPKIVVENLMKKG 732
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 206/442 (46%), Gaps = 39/442 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++A C S D +L + G PDVV+YN+++ G C +L++EM+ M
Sbjct: 197 LVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRM 256
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PP++ ++N+L+ L + G + + V M+ TP + +++G+CK + + A
Sbjct: 257 ACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVA 316
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + +G P +V YN L+KGLC A R +L E+ D + +T+ ++
Sbjct: 317 HEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDF 376
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT-------------- 226
+N +E+L M +G D Y TVI F K G + EA
Sbjct: 377 FCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPN 436
Query: 227 ---------------------DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
D M QM+ G L+ +++NTLIN CK+G +E A LL
Sbjct: 437 TISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLK 496
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+M G D +++ +IDGL KAG A L M G N Y+ I L ++G
Sbjct: 497 QMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREG 556
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+I+ I +F++++ D+ Y++++ +LCK A + L + SG +S
Sbjct: 557 RINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYT 616
Query: 382 AVVDGLRHSGCRREAKKIQSKI 403
++ GL G +EA+++ +++
Sbjct: 617 ILIRGLASEGFVKEAQEMLTEL 638
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 180/369 (48%), Gaps = 4/369 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++A C+ F + +L + G + DV N ++ + +L LL ++
Sbjct: 162 VILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSF 221
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV SYN+++ L + + ++M+ P TFN +++ LC+N +
Sbjct: 222 GCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERV 281
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + +HG P++ Y +I G+CK G L A IL + G PN + Y T++K
Sbjct: 282 HEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKG 341
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+++ E+L+ M K D + ++ F + G + + +EQM+ G D
Sbjct: 342 LCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPD 401
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++Y T+IN +CKEG ++ A +LL M G + + ++TI++ GLC A A +
Sbjct: 402 VITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMS 461
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
M + G N +N +++ L K G ++ AI + + M V D +YS+++ L KA
Sbjct: 462 QMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 521
Query: 357 RLPSASKLL 365
+ A +LL
Sbjct: 522 KTDEALELL 530
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 157/349 (44%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ + + ILNRM G+ P+VV YN+L+ G + +LL EM +
Sbjct: 303 IIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKD 362
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P D ++N L+ Q G D + + M+ P T+ ++NG CK D A+
Sbjct: 363 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAV 422
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P ++Y I++KGLC A R A ++ ++ G N IT+ T++
Sbjct: 423 MLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFL 482
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + +E+L M G + D Y TVI K G+ EA + + MV G+ +
Sbjct: 483 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNT 542
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ Y+++ + +EG++ + D ++ D + +I LCK G + A L Y
Sbjct: 543 IIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAY 602
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVH 350
M G N Y ++ L +G + A + + K + M H
Sbjct: 603 MVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKH 651
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 164/362 (45%), Gaps = 15/362 (4%)
Query: 34 YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
YN+++AG R L + L + +PP+ ++Y ++ L G+ +A V +M
Sbjct: 93 YNAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 94 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 153
P ++++L C+ +A+R+ L G ++ N+++ +C G +
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 154 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
A +L++L G P+ ++Y ++K +++ E++ M R + + T+I
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ + G + + + QMV G DI Y T+I+ CKEG LE A+ +L+ M G +
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE----AYNCIVDRLGKDGKIDH 329
+ + L+ GLC A + L M FD + +N +VD ++G +D
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEM----FDKDCPLDDVTFNILVDFFCQNGLVDR 385
Query: 330 AINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 385
I + E M + D TY+++++ CK + A LL S G + + V+
Sbjct: 386 VIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLK 445
Query: 386 GL 387
GL
Sbjct: 446 GL 447
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 200/408 (49%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C +++L ++ + G P+ + N+L+ G + SL D+++
Sbjct: 50 ILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQ 109
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D SY L++ L ++G+ A ++ + + P ++ +++GLCK++ D A
Sbjct: 110 GFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEA 169
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G P+++TY LI G C AG+L A +L E+ PN TY T++
Sbjct: 170 YDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDT 229
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K K +L+ M +KG D Y ++ + +G +++A MV GV D
Sbjct: 230 LCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPD 289
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ SYN +IN CK +++ A LL EM + D T++ LIDGLCK G I +
Sbjct: 290 VYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTK 349
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M+ G +NL YN ++D L K+ +D AI +F M+ + + +TY++++ LCK
Sbjct: 350 EMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGG 409
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
RL L L G I ++ GL G EA ++SK+
Sbjct: 410 RLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKME 457
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 193/378 (51%), Gaps = 6/378 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ C+ +L + + PDVV Y+++I G ++ L+ + DL EM
Sbjct: 120 ILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNAR 179
Query: 61 GIPPDVWSYNSLMHCLFQL-GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
GI PDV +Y +L+ C F L G+ EA + +MI ++ P T+N +++ LCK
Sbjct: 180 GIFPDVITYTTLI-CGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKE 238
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+ + + K G P++V Y+IL+ G C G ++ A+ I + +G P+ +Y I+
Sbjct: 239 SKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIIN 298
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ ++ + +L M K D Y ++I K+GR+ D ++M G
Sbjct: 299 GLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPA 358
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
++V+YN+L++ CK L+ A L +M+++G + +KYT+T LIDGLCK G +K +
Sbjct: 359 NLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALF 418
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
+++ G+ ++ Y ++ L K+G D A+ + ME + ++ T+ ++ +L +
Sbjct: 419 QHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEK 478
Query: 356 KRLPSASKLLLSCLKSGV 373
A KLL + G+
Sbjct: 479 DENDKAEKLLHEMIAKGL 496
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 169/336 (50%), Gaps = 4/336 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P ++ + ++ + + L +M GI PD+ + + L++C LG+ + V
Sbjct: 8 PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
++ P T N ++ GLC +L + GF + V+Y IL+ GLCK
Sbjct: 68 LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
G R A +L+ + D P+ + Y+TI+ +++ ++ S M +G D
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y T+I F G+L EA + +M+ + +I +YNTLI+ CKEGK++ + LL M
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
K+G + D ++IL+DG C G ++ A+ M + G + ++ +YN I++ L K ++D
Sbjct: 248 KKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVD 307
Query: 329 HAINVFESM----EVKDSFTYSSMVHNLCKAKRLPS 360
A+N+ M + D+ TYSS++ LCK R+ +
Sbjct: 308 EAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITT 343
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 137/293 (46%), Gaps = 4/293 (1%)
Query: 99 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 158
P F +L L K ++ + + + ++ G VP+LVT +ILI C G++ + +
Sbjct: 8 PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67
Query: 159 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 218
L ++ G+ PN I T+MK + K L + +G+ D Y ++ K
Sbjct: 68 LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
IG + A + + + D+V Y+T+I+ CK+ ++ AY L EM +G D T
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+T LI G C AG + A L M + N+ YN ++D L K+GK+ + N+ M
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247
Query: 339 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
K D YS ++ C + A ++ L +++GV + +++GL
Sbjct: 248 KKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGL 300
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ + M G ++VTYNSL+ G +N L ++ L +M E G
Sbjct: 331 LIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERG 390
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+ ++Y +L+ L + G+ + +FQ ++ T+ +M++GLCK D AL
Sbjct: 391 IQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEAL 450
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 169
M ++ +G +P VT+ I+I+ L + A +L E+ G P
Sbjct: 451 AMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 111/237 (46%), Gaps = 4/237 (1%)
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
H P I + I+ + + Y + + M+ KG D +I F +G++ +
Sbjct: 6 HIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSF 65
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ +++ G Q + + NTL+ C +G+++ + D++ QGF+ D+ ++ IL++GL
Sbjct: 66 SVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGL 125
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G + A L + ++ Y+ I+D L KD +D A +++ M + D
Sbjct: 126 CKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDV 185
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
TY++++ C A +L A LL + + ++D L G +E+K +
Sbjct: 186 ITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNL 242
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 195/402 (48%), Gaps = 39/402 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ + D + + +RM + G P+ VTY++LI G + +LD+L+EM+E G
Sbjct: 239 LILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG 298
Query: 62 IPPDVWSYN-----------------------------------SLMHCLFQLGKPDEAN 86
I P V++Y +L+ L +LGK + A
Sbjct: 299 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI 358
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
++ M+ L P T T+N ++N LC AL++F ++ HG + TYN +IKGL
Sbjct: 359 GLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGL 418
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C G + A + +++ G P +TY T++ +L MK G D
Sbjct: 419 CLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDE 478
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ Y +++ F K G+L+ A+ Y ++MV G+ + VSY LI+ + K+GK++ A LL
Sbjct: 479 WTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKR 538
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
ME+ G + ++ +I+GL K A + M + G N+ Y ++D L ++G+
Sbjct: 539 MEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGR 598
Query: 327 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 364
A +F ME + + +TYSS+++ LC+ + A ++
Sbjct: 599 TQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERM 640
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 199/386 (51%), Gaps = 4/386 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
IL+++ + +SPDV TY SLI G RN L + + D M++ G P+ +Y++L++ L
Sbjct: 220 ILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLC 279
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
G+ DEA + ++MI + P T+ + + LC + + A+ + ++K G P +
Sbjct: 280 NEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQ 339
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY LI GL + G+L A + ++ G PN +TY ++ ++ L+I M
Sbjct: 340 TYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWM 399
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ G + Y +I G +++A E+M+ G +V+YNTLIN Y +G +
Sbjct: 400 EGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNV 459
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A LLD M++ G E D++T+ L+ G K G ++ A + + M + G + N +Y +
Sbjct: 460 NNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTAL 519
Query: 318 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+D KDGK+D A+++ + ME + +Y+++++ L K R A K+ ++ G+
Sbjct: 520 IDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGL 579
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKI 399
++DGL +G + A KI
Sbjct: 580 LPNVITYTTLIDGLCRNGRTQFAFKI 605
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 210/463 (45%), Gaps = 78/463 (16%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
I A C + ++ RM++ G P+V TY +LI+G +R L ++ L +ML+ G+
Sbjct: 310 ITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL 369
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDM------------------IC--GDLT---- 98
P+ +YN+L++ L G+ A ++F M +C GD+
Sbjct: 370 VPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV 429
Query: 99 -----------PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
P T+N ++NG +NA R+ ++++G P+ TYN L+ G
Sbjct: 430 LFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFS 489
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K G+L +A + +E+ + G PN ++YT ++ ++ K + L +L M+ G +
Sbjct: 490 KWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVE 549
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y VI K R EA ++MV G+ ++++Y TLI+ C+ G+ + A+ + +M
Sbjct: 550 SYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDM 609
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK- 326
EK+ + YT++ LI GLC+ G A E M++IG + L+ Y+ +V L + G+
Sbjct: 610 EKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRF 665
Query: 327 ----------------------------------IDHAINVFESMEVK----DSFTYSSM 348
+DHA+ +F S+E K Y ++
Sbjct: 666 YEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRAL 725
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ LCKA ++ A L + L+ + +VDGL G
Sbjct: 726 ICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEG 768
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 187/378 (49%), Gaps = 4/378 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
LN + G + + N+L+ + ++ + +L +ML GI P + ++N+L++ L
Sbjct: 150 FLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILS 209
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ GK EA + + DL+P T+ ++ G C+NR D A +F + K G P V
Sbjct: 210 KKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSV 269
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY+ LI GLC GR+ A +L+E+ + G P TYT + + +E+++ M
Sbjct: 270 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 329
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K++G + Y +I+ ++G+L+ A +M+ +G+ + V+YN LIN C G+
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 389
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A + ME G + T+ +I GLC G+I+ A + E M K+G + YN +
Sbjct: 390 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 449
Query: 318 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
++ G +++A + + M+ D +TY+ +V K +L SAS ++ G+
Sbjct: 450 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509
Query: 374 RILKSAQKAVVDGLRHSG 391
+ A++DG G
Sbjct: 510 NPNPVSYTALIDGHSKDG 527
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 163/325 (50%), Gaps = 4/325 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ + ++ ++ M E G++P+ V+Y +LI G +++ + +L LL M EMG
Sbjct: 484 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMG 543
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V SYN++++ L + + EA ++ M+ L P T+ +++GLC+N T A
Sbjct: 544 CNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAF 603
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F ++K +P L TY+ LI GLC+ G+ A + + + G P TY+T++
Sbjct: 604 KIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGL 659
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R ++ +++ MK +G+ D Y +++ A K + A + G QL +
Sbjct: 660 CRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHL 719
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
Y LI CK G++E A L D M ++ + D+ T+L+DGL K G + L
Sbjct: 720 SIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHI 779
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGK 326
M F N++ Y + L + GK
Sbjct: 780 MESKNFTPNIQTYVILGRELSRIGK 804
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 112/232 (48%), Gaps = 4/232 (1%)
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
D AP ++K C + + + L+ + G+ F + T++ K ++
Sbjct: 121 DRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVE 180
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A + +QM+ G+Q ++++NTLIN+ K+GK+ A L+L ++ + D +T+T LI
Sbjct: 181 GARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLI 240
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
G C+ N+ A + M K G D N Y+ +++ L +G++D A+++ E M K
Sbjct: 241 LGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIE 300
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+TY+ + LC + A +L+ K G R A++ GL G
Sbjct: 301 PTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLG 352
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 199/417 (47%), Gaps = 28/417 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD------ 55
LI AYC+ + Y +L +M + G P V YN LI G N L SLD+L+
Sbjct: 375 LIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP-SLDVLELAEKAY 433
Query: 56 -EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
EML+ + + + ++L CL GK ++A + ++M+ P T+T++ ++ LC
Sbjct: 434 GEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNA 493
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
DNA +F ++ + VP++ TY ILI CK G L+ AR E+ G APN +TY
Sbjct: 494 SKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTY 553
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM-- 232
T ++ + RK E+ M +G + Y +I K G++++A +M
Sbjct: 554 TALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRG 613
Query: 233 ------------VTDGVQLD--IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
+ DG D I +Y L++ CK K++ A LLD M +G E +
Sbjct: 614 NADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIV 673
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+ LIDG CK G + A++ M++ G+ N+ Y+ ++DRL KD ++D A+ V M
Sbjct: 674 YDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRML 733
Query: 339 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ Y+ M+ LCK + A +L+ + G A++DG +G
Sbjct: 734 ENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAG 790
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 198/461 (42%), Gaps = 61/461 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C+ F+ L+RMR + P+VVTY L+ G R L +L M+ G
Sbjct: 305 MISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEG 364
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT---- 117
P +NSL+H + G A ++ + M P +NI++ G+C N
Sbjct: 365 CYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLD 424
Query: 118 -------------------------------------DNALRMFRGLQKHGFVPELVTYN 140
+ A + R + GF+P+ TY+
Sbjct: 425 VLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYS 484
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
+I LC A ++ A + +E+ + P+ TYT ++ + + + M R
Sbjct: 485 KVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD 544
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G + Y +I A++K ++ A + E M+++G ++V+Y LI+ +CK G++E A
Sbjct: 545 GCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKA 604
Query: 261 YLLLDEMEKQG--------FECDK--------YTHTILIDGLCKAGNIKGARLHLEYMNK 304
+ M F+ D +T+ L+DGLCKA +K AR L+ M+
Sbjct: 605 CQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSV 664
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPS 360
G + N Y+ ++D K GK+D A VF M + + +TYSS++ L K KRL
Sbjct: 665 EGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDL 724
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
A K+L L++ ++DGL G EA ++ S
Sbjct: 725 ALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 185/384 (48%), Gaps = 22/384 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID++C+ + M G +P+VVTY +LI + +S + +L + ML
Sbjct: 520 ILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSE 579
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMIC---------------GDL-TPCTA 102
G P+V +Y +L+ HC + G+ ++A +++ M G++ P
Sbjct: 580 GCIPNVVTYTALIDGHC--KSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIF 637
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
T+ +++GLCK A + + G P + Y+ LI G CK G+L A+ + ++
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM 697
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
+ G+ PN TY++++ F++++ L L++LS M + Y +I K+G+
Sbjct: 698 SERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
EA M M G ++V+Y +I+ + K GK++ L+ +M +G + T+ +L
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI--NVFESMEVK 340
I+ C AG + A L+ M + + ++ Y +++ ++ I + + E++ V
Sbjct: 818 INHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVP 877
Query: 341 DSFTYSSMVHNLCKAKRLPSASKL 364
Y ++ + CKA RL A +L
Sbjct: 878 IIPAYRILIDSFCKAGRLELALEL 901
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 144/302 (47%), Gaps = 16/302 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+ +L+ M G P+ + Y++LI G + L + + +M E G
Sbjct: 642 LVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERG 701
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V++Y+SL+ LF+ + D A +V M+ P + M++GLCK TD A
Sbjct: 702 YGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAY 761
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ +++ G P +VTY +I G KAG++ +++++G G APN +TY ++ C
Sbjct: 762 RLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHC 821
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF-----VKIGRLKEATDYMEQMVTDG 236
++L MK+ + GY VI F + +G L E + +
Sbjct: 822 CAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDE--------IAEN 873
Query: 237 VQLDIV-SYNTLINLYCKEGKLEAAYLLLDEMEK--QGFECDKYTHTILIDGLCKAGNIK 293
V + I+ +Y LI+ +CK G+LE A L EM DK ++ LI+ L A +
Sbjct: 874 VAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVD 933
Query: 294 GA 295
A
Sbjct: 934 KA 935
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 173/416 (41%), Gaps = 50/416 (12%)
Query: 35 NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 94
N LI RN L + +L+ L + ++G P +YN+L+ + + D A V ++M
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
T ++ LCK AL + ++K F + V Y +I GLC+A
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLFEE 317
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
A L + S PN +TY ++ C R R+ ILS M +G + ++I
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI-------------------------- 248
A+ + G A +++M G Q V YN LI
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437
Query: 249 ------------NL---YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
NL C GK E AY ++ EM +GF D T++ +I LC A +
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-----FTYSSM 348
A L E M ++ Y ++D K G + A F+ M V+D TY+++
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEM-VRDGCAPNVVTYTAL 556
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+H KA+++ SA++L L G A++DG SG +A +I +++R
Sbjct: 557 IHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMR 612
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 170/407 (41%), Gaps = 44/407 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ ++ L R+++ G P +TYN+L+ L + + EM +
Sbjct: 202 VLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDS 261
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEA------------NRVFQDMICG------------- 95
G D ++ +H L + G+ EA ++ MI G
Sbjct: 262 GFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDF 321
Query: 96 -------DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
P T+ I+L G + R R+ + G P +N LI C+
Sbjct: 322 LSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCR 381
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS-AMKRKGYTFDG- 206
+G A +LK++GD G P + Y ++ N K L++L A K G D
Sbjct: 382 SGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP-SLDVLELAEKAYGEMLDAH 440
Query: 207 -----FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ G+ ++A + +M++ G D +Y+ +I L C K++ A+
Sbjct: 441 VVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAF 500
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
LL +EM+ D +T+TILID CK G ++ AR + M + G N+ Y ++
Sbjct: 501 LLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAY 560
Query: 322 GKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 364
K K+ A +FE M + + TY++++ CK+ ++ A ++
Sbjct: 561 LKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI 607
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 116/242 (47%), Gaps = 7/242 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ D Y +++ M E G P+VVTY ++I G + + L+L+ +M G
Sbjct: 747 MIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y L++ G D+A+++ +M A + ++ G NR +L
Sbjct: 807 CAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISL 864
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD--SGHAPNAITYTTIMK 179
+ + ++ VP + Y ILI CKAGRL A + KE+ S A + Y+++++
Sbjct: 865 GLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIE 924
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA---TDYMEQMVTDG 236
K E+ + M ++G + + ++ ++I R +EA +D + QM+ D
Sbjct: 925 SLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSDCICQMMVDF 984
Query: 237 VQ 238
V+
Sbjct: 985 VR 986
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 7/232 (3%)
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
Y+ L++ L G R L+E+ D +++ C RN + + LE L +
Sbjct: 164 VYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRL 223
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K GY Y ++ F++ RL A +M G +D + ++L CK G+
Sbjct: 224 KDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRW 283
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A L+ EK+ F+ D +T +I GLC+A + A L M N+ Y +
Sbjct: 284 REALALI---EKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRIL 340
Query: 318 VDRLGKDGKIDHAINVFESMEVKDSFT----YSSMVHNLCKAKRLPSASKLL 365
+ + ++ + M + + ++S++H C++ A KLL
Sbjct: 341 LCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLL 392
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 189/360 (52%), Gaps = 4/360 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ +C ++++M E G PD VT+ +LI G ++ S ++ L+D M++ G
Sbjct: 154 LLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG 213
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ +Y ++++ L + G D A + M + ++ +++ LCK R+ D+AL
Sbjct: 214 CQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 273
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ G P ++TY+ LI LC GR A +L ++ + PN +T++ ++
Sbjct: 274 NLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAF 333
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K ++ M ++ + F Y ++I F + RL EA +E M+ ++
Sbjct: 334 VKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNV 393
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTLIN +CK +++ L EM ++G + T+T LI G +A + A++ +
Sbjct: 394 VTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 453
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M +G N+ YN ++D L K+GK+ A+ VFE ++ D +TY+ M+ +CKA +
Sbjct: 454 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 154/292 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ D +LN+M A I +VV Y+++I + +L+L EM G
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V +Y+SL+ CL G+ +A+R+ DMI + P TF+ +++ K A
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + K P + TY+ LI G C RL A+ +L+ + PN +TY T++
Sbjct: 344 KLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGF 403
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ G+E+ M ++G + Y T+I F + A +QMV+ GV +I
Sbjct: 404 CKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 463
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
++YN L++ CK GKL A ++ + +++ E D YT+ I+I+G+CKAG K
Sbjct: 464 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 195/394 (49%), Gaps = 4/394 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + FD + +M GIS ++ TYN LI R S LS +L LL +M+++G
Sbjct: 84 LLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLG 143
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ + NSL++ + +A + M+ P T TF +++GL + A+
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P+LVTY ++ GLCK G A +L ++ + N + Y+T++
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R L + + M+ KG + Y ++I+ GR +A+ + M+ + ++
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+++ LI+ + K+GKL A L +EM K+ + + +T++ LI+G C + A+ LE
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M + N+ YN +++ K ++D + +F M V ++ TY++++H +A+
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 443
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+A + + GV ++DGL +G
Sbjct: 444 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 477
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 35/224 (15%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + + +L+ M E I+P++VT+++LI + L + L +EM++
Sbjct: 294 LISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS 353
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P++++Y+SL++ L + EA ++ + MI D P T+N ++NG CK + D +
Sbjct: 354 IDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGM 413
Query: 122 RMFRGLQKHGFV-----------------------------------PELVTYNILIKGL 146
+FR + + G V P ++TYNIL+ GL
Sbjct: 414 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 473
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
CK G+L A + + L S P+ TY +++ + K+K+G
Sbjct: 474 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 138/290 (47%), Gaps = 4/290 (1%)
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
D+A+ +F + + P ++ ++ L+ + K + +++ G + N TY +
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ C R + L L +L M + GY D +++ F R+ +A ++QMV G
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+ D V++ TLI+ K A L+D M ++G + D T+ +++GLCK G+ A
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 353
L M ++N+ Y+ ++D L K D A+N+F ME K + TYSS++ LC
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
R AS+LL ++ + A++D G +A+K+ ++
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM 349
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 137/323 (42%), Gaps = 41/323 (12%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
D+A +F M P F+ +L+ + K D + ++ G L TYNIL
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 143 I-----------------------------------KGLCKAGRLRTARWILKELGDSGH 167
I G C R+ A ++ ++ + G+
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 168 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
P+ +T+TT++ F + K + ++ M ++G D Y V+ K G A +
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
+ +M ++ ++V Y+T+I+ CK + A L EME +G + T++ LI LC
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----- 342
G A L M + + NL ++ ++D K GK+ A ++E M +K S
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM-IKRSIDPNI 358
Query: 343 FTYSSMVHNLCKAKRLPSASKLL 365
FTYSS+++ C RL A ++L
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQML 381
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 117/252 (46%), Gaps = 4/252 (1%)
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ S P+ I ++ ++ + K+ L + M+ G + + + Y +I F + R
Sbjct: 69 MAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSR 128
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
L A + +M+ G + DIV+ N+L+N +C ++ A L+D+M + G++ D T T
Sbjct: 129 LSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTT 188
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 340
LI GL A ++ M + G +L Y +V+ L K G D A+N+ ME
Sbjct: 189 LIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAK 248
Query: 341 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
+ YS+++ +LCK + A L GVR +++ L + G +A
Sbjct: 249 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDAS 308
Query: 398 KIQSKIRMAKIS 409
++ S + KI+
Sbjct: 309 RLLSDMIERKIN 320
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 202/394 (51%), Gaps = 7/394 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE---MGIPPDVWSY 69
DA +L RM E G PDV +YN+L+ G + +L+LL M + G PPDV SY
Sbjct: 145 DAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 204
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N++++ F+ G D+A + +M+ + P T++ ++ LCK + D A+ + + K
Sbjct: 205 NTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVK 264
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
+G +P+ +TYN ++ G C +G+ + A LK++ G PN +TY+++M +N +
Sbjct: 265 NGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE 324
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+I +M ++G D Y T++ + G L E ++ MV +G+Q D +N LI
Sbjct: 325 ARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILIC 384
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
Y K+ K++ A L+ +M + G + + +ID LCK+G++ A L+ E M G
Sbjct: 385 AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP 444
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
N+ Y ++ L K D A + M + ++ ++S++ + CK R+ + KL
Sbjct: 445 NIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 504
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
++ GV+ ++DG +G EA K+
Sbjct: 505 DLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKL 538
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 191/395 (48%), Gaps = 4/395 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D Y+ + M + GI PDVVTY+S+IA + + ++++L+ M++ G+ PD +YNS+
Sbjct: 218 DKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 277
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+H G+P EA + M + P T++ ++N LCKN + A ++F + K G
Sbjct: 278 LHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGL 337
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P++ TY L++G G L +L + +G P+ + ++ + K +
Sbjct: 338 EPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAML 397
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ S M++ G + Y TVI K G + +A Y EQM+ +G+ +I+ Y +LI+ C
Sbjct: 398 VFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLC 457
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K + A L+ EM +G + +ID CK G + + + M +IG ++
Sbjct: 458 TCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 517
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
YN ++D GK+D A + SM D TY ++++ C+ R+ A L
Sbjct: 518 TYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEM 577
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ SGV ++ GL H+ AK++ I
Sbjct: 578 VSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI 612
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 182/382 (47%), Gaps = 10/382 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL-LDEMLE 59
+LI C+ D G+ L + + G D +T+ L+ G + S ++D+ L M E
Sbjct: 97 ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI---CGDLTPCTATFNIMLNGLCKNRY 116
+G PDV+SYN+L+ L + EA + M G P ++N +LNG K
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGD 216
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
+D A + + G +P++VTY+ +I LCKA + A +L + +G P+ +TY +
Sbjct: 217 SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 276
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
I+ + + K + L M+ G + Y +++ K GR EA + M G
Sbjct: 277 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 336
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
++ DI +Y TL+ Y +G L + LLD M + G + D + ILI K + A
Sbjct: 337 LEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAM 396
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHN 351
L M + G + N+ Y ++D L K G +D A+ FE M + + T Y+S++H
Sbjct: 397 LVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQM-IDEGLTPNIIVYTSLIHG 455
Query: 352 LCKAKRLPSASKLLLSCLKSGV 373
LC + A +L+L L G+
Sbjct: 456 LCTCDKWDKAEELILEMLDRGI 477
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 182/392 (46%), Gaps = 39/392 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I A C+ + D +LN M + G+ PD +TYNS++ G + ++ L +M G
Sbjct: 242 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDG 301
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT------------------ 103
+ P+V +Y+SLM+ L + G+ EA ++F M L P AT
Sbjct: 302 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMH 361
Query: 104 -----------------FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
FNI++ K D A+ +F +++HG P +V Y +I L
Sbjct: 362 ALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVL 421
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK+G + A +++ D G PN I YT+++ K+ E++ M +G +
Sbjct: 422 CKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNT 481
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ ++I + K GR+ E+ + MV GV+ DI++YNTLI+ C GK++ A LL
Sbjct: 482 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLAS 541
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M G + D T+ LI+G C+ + A + M G N+ YN I+ L +
Sbjct: 542 MVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 601
Query: 327 IDHAINVFESMEVKDS----FTYSSMVHNLCK 354
A ++ S+ + TY+ ++H LCK
Sbjct: 602 TAAAKELYVSITKSGTQLELSTYNIILHGLCK 633
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 179/378 (47%), Gaps = 43/378 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI AY + D + ++MR+ G++P+VV Y ++I ++ + ++ ++M++
Sbjct: 381 ILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDE 440
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P++ Y SL+H L K D+A + +M+ + T FN +++ CK +
Sbjct: 441 GLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES 500
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F + + G P+++TYN LI G C AG++ A +L + G P+ +TY T++
Sbjct: 501 EKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLIN- 559
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
GYC ++ R+ +A ++MV+ GV +
Sbjct: 560 ---------------------------GYC-------RVSRMDDALALFKEMVSSGVSPN 585
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++YN ++ + AA L + K G + + T+ I++ GLCK N+ L +
Sbjct: 586 IITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCK-NNLTDEALRM- 643
Query: 301 YMNKIGFDSNLE--AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 354
+ N D LE +N ++ L K G++D A ++F + V D TYS M NL +
Sbjct: 644 FQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIE 703
Query: 355 AKRLPSASKLLLSCLKSG 372
L L LS ++G
Sbjct: 704 QGSLEELDDLFLSMEENG 721
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 144/312 (46%), Gaps = 2/312 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C +D ++ M + GI + + +NS+I + + S L D M+ +G
Sbjct: 452 LIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 511
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ +YN+L+ GK DEA ++ M+ + P T+ ++NG C+ D+AL
Sbjct: 512 VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDAL 571
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ + G P ++TYNI+++GL R A+ + + SG TY I+
Sbjct: 572 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGL 631
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N L + + + + +I A +K GR+ EA D +G+ D+
Sbjct: 632 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDV 691
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y+ + ++G LE L ME+ G D ++ L + G+I A +L
Sbjct: 692 RTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFM 751
Query: 302 MNKIGFDSNLEA 313
+++ F +LEA
Sbjct: 752 IDEKHF--SLEA 761
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 153/334 (45%), Gaps = 14/334 (4%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI---CGDLTPCTATFNIMLN 109
+ DE+L G ++ N + + + P A + M G +TP T+ I++
Sbjct: 42 VFDELLRRGRGASIYGLNRALADVAR-HSPAAAVSRYNRMARAGAGKVTPTVHTYAILIG 100
Query: 110 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHA 168
C+ D + K GF + +T+ L+KGLC R A +L+ + + G
Sbjct: 101 CCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 160
Query: 169 PNAITYTTIMK-CCFRNRKYKLGLEILSAM---KRKGYTFDGFGYCTVIAAFVKIGRLKE 224
P+ +Y ++K C NR + LE+L M + G D Y TV+ F K G +
Sbjct: 161 PDVFSYNNLLKGLCDENRSQE-ALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDK 219
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A +M+ G+ D+V+Y+++I CK ++ A +L+ M K G D T+ ++
Sbjct: 220 AYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 279
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 340
G C +G K A L+ M G + N+ Y+ +++ L K+G+ A +F+SM +
Sbjct: 280 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEP 339
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
D TY +++ L LL +++G++
Sbjct: 340 DIATYRTLLQGYATKGALVEMHALLDLMVRNGIQ 373
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 101/241 (41%), Gaps = 37/241 (15%)
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
P TY ++ CC R + LG L + +KG+ D + ++ R +A D
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149
Query: 229 MEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
+ + +T+ G D+ SYN L+ C E + + A LL M
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADD----------------- 192
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSF 343
+G G ++ +YN +++ K+G D A + + M + D
Sbjct: 193 -----RGG----------GSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVV 237
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
TYSS++ LCKA+ + A ++L + +K+GV +++ G SG +EA K+
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM 297
Query: 404 R 404
R
Sbjct: 298 R 298
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 199/417 (47%), Gaps = 28/417 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD------ 55
LI AYC+ + Y +L +M + G P V YN LI G N L SLD+L+
Sbjct: 375 LIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP-SLDVLELAEKAY 433
Query: 56 -EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
EML+ + + + ++L CL GK ++A + ++M+ P T+T++ ++ LC
Sbjct: 434 GEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNA 493
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
DNA +F ++ + VP++ TY ILI CK G L+ AR E+ G APN +TY
Sbjct: 494 SKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTY 553
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM-- 232
T ++ + RK E+ M +G + Y +I K G++++A +M
Sbjct: 554 TALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRG 613
Query: 233 ------------VTDGVQLD--IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
+ DG D I +Y L++ CK K++ A LLD M +G E +
Sbjct: 614 NADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIV 673
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+ LIDG CK G + A++ M++ G+ N+ Y+ ++DRL KD ++D A+ V M
Sbjct: 674 YDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRML 733
Query: 339 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ Y+ M+ LCK + A +L+ + G A++DG +G
Sbjct: 734 ENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAG 790
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 198/461 (42%), Gaps = 61/461 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C+ F+ L+RMR + P+VVTY L+ G R L +L M+ G
Sbjct: 305 MISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEG 364
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT---- 117
P +NSL+H + G A ++ + M P +NI++ G+C N
Sbjct: 365 CYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLD 424
Query: 118 -------------------------------------DNALRMFRGLQKHGFVPELVTYN 140
+ A + R + GF+P+ TY+
Sbjct: 425 VLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYS 484
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
+I LC A ++ A + +E+ + P+ TYT ++ + + + M R
Sbjct: 485 KVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD 544
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G + Y +I A++K ++ A + E M+++G ++V+Y LI+ +CK G++E A
Sbjct: 545 GCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKA 604
Query: 261 YLLLDEMEKQG--------FECDK--------YTHTILIDGLCKAGNIKGARLHLEYMNK 304
+ M F+ D +T+ L+DGLCKA +K AR L+ M+
Sbjct: 605 CQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSV 664
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPS 360
G + N Y+ ++D K GK+D A VF M + + +TYSS++ L K KRL
Sbjct: 665 EGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDL 724
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
A K+L L++ ++DGL G EA ++ S
Sbjct: 725 ALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 185/384 (48%), Gaps = 22/384 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID++C+ + M G +P+VVTY +LI + +S + +L + ML
Sbjct: 520 ILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSE 579
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMIC---------------GDL-TPCTA 102
G P+V +Y +L+ HC + G+ ++A +++ M G++ P
Sbjct: 580 GCIPNVVTYTALIDGHC--KSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIF 637
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
T+ +++GLCK A + + G P + Y+ LI G CK G+L A+ + ++
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM 697
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
+ G+ PN TY++++ F++++ L L++LS M + Y +I K+G+
Sbjct: 698 SERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
EA M M G ++V+Y +I+ + K GK++ L+ +M +G + T+ +L
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI--NVFESMEVK 340
I+ C AG + A L+ M + + ++ Y +++ ++ I + + E++ V
Sbjct: 818 INHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVP 877
Query: 341 DSFTYSSMVHNLCKAKRLPSASKL 364
Y ++ + CKA RL A +L
Sbjct: 878 IIPAYRILIDSFCKAGRLELALEL 901
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 144/302 (47%), Gaps = 16/302 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+ +L+ M G P+ + Y++LI G + L + + +M E G
Sbjct: 642 LVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERG 701
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V++Y+SL+ LF+ + D A +V M+ P + M++GLCK TD A
Sbjct: 702 YGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAY 761
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ +++ G P +VTY +I G KAG++ +++++G G APN +TY ++ C
Sbjct: 762 RLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHC 821
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF-----VKIGRLKEATDYMEQMVTDG 236
++L MK+ + GY VI F + +G L E + +
Sbjct: 822 CAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDE--------IAEN 873
Query: 237 VQLDIV-SYNTLINLYCKEGKLEAAYLLLDEMEK--QGFECDKYTHTILIDGLCKAGNIK 293
V + I+ +Y LI+ +CK G+LE A L EM DK ++ LI+ L A +
Sbjct: 874 VAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVD 933
Query: 294 GA 295
A
Sbjct: 934 KA 935
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 173/416 (41%), Gaps = 50/416 (12%)
Query: 35 NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 94
N LI RN L + +L+ L + ++G P +YN+L+ + + D A V ++M
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
T ++ LCK AL + ++K F + V Y +I GLC+A
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLFEE 317
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
A L + S PN +TY ++ C R R+ ILS M +G + ++I
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI-------------------------- 248
A+ + G A +++M G Q V YN LI
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437
Query: 249 ------------NL---YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
NL C GK E AY ++ EM +GF D T++ +I LC A +
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-----FTYSSM 348
A L E M ++ Y ++D K G + A F+ M V+D TY+++
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEM-VRDGCAPNVVTYTAL 556
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+H KA+++ SA++L L G A++DG SG +A +I +++R
Sbjct: 557 IHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMR 612
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 170/407 (41%), Gaps = 44/407 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ ++ L R+++ G P +TYN+L+ L + + EM +
Sbjct: 202 VLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDS 261
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEA------------NRVFQDMICG------------- 95
G D ++ +H L + G+ EA ++ MI G
Sbjct: 262 GFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDF 321
Query: 96 -------DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
P T+ I+L G + R R+ + G P +N LI C+
Sbjct: 322 LSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCR 381
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS-AMKRKGYTFDG- 206
+G A +LK++GD G P + Y ++ N K L++L A K G D
Sbjct: 382 SGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP-SLDVLELAEKAYGEMLDAH 440
Query: 207 -----FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ G+ ++A + +M++ G D +Y+ +I L C K++ A+
Sbjct: 441 VVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAF 500
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
LL +EM+ D +T+TILID CK G ++ AR + M + G N+ Y ++
Sbjct: 501 LLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAY 560
Query: 322 GKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 364
K K+ A +FE M + + TY++++ CK+ ++ A ++
Sbjct: 561 LKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI 607
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 113/237 (47%), Gaps = 7/237 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ D Y +++ M E G P+VVTY ++I G + + L+L+ +M G
Sbjct: 747 MIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y L++ G D+A+++ +M A + ++ G NR +L
Sbjct: 807 CAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISL 864
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD--SGHAPNAITYTTIMK 179
+ + ++ VP + Y ILI CKAGRL A + KE+ S A + Y+++++
Sbjct: 865 GLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIE 924
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA---TDYMEQMV 233
K E+ + M ++G + + ++ ++I R +EA +D + QMV
Sbjct: 925 SLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSDCICQMV 981
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 7/232 (3%)
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
Y+ L++ L G R L+E+ D +++ C RN + + LE L +
Sbjct: 164 VYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRL 223
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K GY Y ++ F++ RL A +M G +D + ++L CK G+
Sbjct: 224 KDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRW 283
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A L+ EK+ F+ D +T +I GLC+A + A L M N+ Y +
Sbjct: 284 REALALI---EKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRIL 340
Query: 318 VDRLGKDGKIDHAINVFESMEVKDSFT----YSSMVHNLCKAKRLPSASKLL 365
+ + ++ + M + + ++S++H C++ A KLL
Sbjct: 341 LCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLL 392
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 194/379 (51%), Gaps = 6/379 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ FD +LN M G SPDV +Y +LI +N +S +L L DEM E
Sbjct: 129 ILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPER 188
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG-DLTPCTATFNIMLNGLCKNRYTDN 119
G+ PDV YN L+ F+ G A+ +++ ++ G + P ++N+M+NGLCK D
Sbjct: 189 GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDE 248
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+ ++ ++K+ +L TY+ LI GLC +G L A + KE+ ++G +P+ + Y T++
Sbjct: 249 SFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLN 308
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
R + + LE+ M+++G Y +I + ++ EA E +
Sbjct: 309 GYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCA 367
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D ++Y L++ CK G L A +L+E E + D + ++ +I+GLC+ G + L
Sbjct: 368 DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVL 427
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKA 355
+ M K G N N +++ + K++ A+ F +M K F TY+++++ L KA
Sbjct: 428 DQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKA 487
Query: 356 KRLPSASKLLLSCLKSGVR 374
+R A L+ L+ G +
Sbjct: 488 ERFSEAYALVKEMLQKGWK 506
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 190/428 (44%), Gaps = 49/428 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM- 60
+ D+ +F + + + + + P +V + +NS+ +LD+ M E+
Sbjct: 29 IFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAH-----AYAKNSMPDQALDIFQRMHEIF 83
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI-------------- 106
G P + SYNSL++ L + K DEA F L+P T+NI
Sbjct: 84 GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 143
Query: 107 ---------------------MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
++N L KN Y +AL++F + + G P++ YNILI G
Sbjct: 144 KELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDG 203
Query: 146 LCKAGRLRTARWILKEL--GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
K G + A I + L G S + PN +Y ++ + K+ EI MK+
Sbjct: 204 FFKKGDILNASEIWERLLKGPSVY-PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERG 262
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D + Y T+I G L AT ++M +GV D+V YNT++N Y + G++E L
Sbjct: 263 QDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLEL 322
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
MEK+G ++ ILI GL + + A E + + ++ Y +V L K
Sbjct: 323 WKVMEKEGCRT-VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCK 381
Query: 324 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
+G ++ A+++ E E D+F YSSM++ LC+ RL + +L K G +
Sbjct: 382 NGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYV 441
Query: 380 QKAVVDGL 387
AV++G
Sbjct: 442 CNAVINGF 449
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 173/376 (46%), Gaps = 5/376 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + D + M E G+SPDVV YN+++ G R + L+L M + G
Sbjct: 271 LIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG 330
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
V SYN L+ LF+ K DEA +++ + D + T+ ++++GLCKN Y + AL
Sbjct: 331 CR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKAL 389
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + Y+ +I GLC+ GRL +L ++ G PN ++
Sbjct: 390 SILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGF 449
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R K + L M KG Y T+I K R EA +++M+ G + ++
Sbjct: 450 VRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNM 509
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y+ L+N C+ KL+ A L + ++GF+ D H I+I GLC +G ++ A
Sbjct: 510 ITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSE 569
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
M + NL +N +++ K + A +++ + D +Y+ + LC R
Sbjct: 570 MKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHR 629
Query: 358 LPSASKLLLSCLKSGV 373
+ A L + GV
Sbjct: 630 ISDAVGFLNDAVDRGV 645
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 195/415 (46%), Gaps = 43/415 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
+LID + + I R+ + + P++ +YN +I G + S ++ M +
Sbjct: 199 ILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKK 258
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
D+++Y++L+H L G D A RV+++M ++P +N MLNG + +
Sbjct: 259 NERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEE 318
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
L +++ ++K G +V+YNILI+GL + ++ A I + L + +++TY ++
Sbjct: 319 CLELWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVH 377
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT---------------------------- 211
+N L IL + D F Y +
Sbjct: 378 GLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKP 437
Query: 212 -------VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
VI FV+ +L++A + MV+ G +V+YNTLIN K + AY L+
Sbjct: 438 NPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALV 497
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
EM ++G++ + T+++L++GLC+ + A L + + K GF +++ +N I+ L
Sbjct: 498 KEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK-GFKPDVKMHNIIIHGLCS 556
Query: 324 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
GK++ A+ ++ M+ V + T+++++ K + ASK+ L+ G++
Sbjct: 557 SGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQ 611
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 136/295 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + D +I + E D +TY L+ G +N L+ +L +L+E
Sbjct: 339 ILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENG 398
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
D ++Y+S+++ L + G+ DE V M P N ++NG + ++A
Sbjct: 399 RGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDA 458
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
LR F + G P +VTYN LI GL KA R A ++KE+ G PN ITY+ +M
Sbjct: 459 LRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNG 518
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ +K + L + KG+ D + +I G++++A +M +
Sbjct: 519 LCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPN 578
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
+V++NTL+ + K E A + D + + G + D ++ I + GLC I A
Sbjct: 579 LVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDA 633
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 140/288 (48%), Gaps = 8/288 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ D +L++M + G P+ N++I G R S L +L M+ G
Sbjct: 410 MINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKG 469
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +YN+L++ L + + EA + ++M+ P T+++++NGLC+ + D AL
Sbjct: 470 CFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMAL 529
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + GF P++ +NI+I GLC +G++ A + E+ PN +T+ T+M+
Sbjct: 530 NLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGF 589
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ R ++ +I + + G D Y + R+ +A ++ V GV
Sbjct: 590 YKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTA 649
Query: 242 VSYNTLINLYCK-EGKLEAAYLLLD-------EMEKQGFECDKYTHTI 281
+++N L+ Y +G +E ++ +M GF CDK + +
Sbjct: 650 ITWNILVQGYLALKGYMEPVFVPASMKGNPGMQMRYFGFVCDKLSSPL 697
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 134/285 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C+ + +IL D Y+S+I G R L +LD+M +
Sbjct: 374 VLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKH 433
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ + N++++ + K ++A R F +M+ P T+N ++NGL K A
Sbjct: 434 GCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEA 493
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + + G+ P ++TY++L+ GLC+ +L A + + + G P+ + I+
Sbjct: 494 YALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHG 553
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + L++ S MK++ + + T++ F K+ + A+ + ++ G+Q D
Sbjct: 554 LCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPD 613
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
I+SYN + C ++ A L++ +G T IL+ G
Sbjct: 614 IISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQG 658
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 192/370 (51%), Gaps = 8/370 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C +++RM E G PD+VTYNS++ G R+ S + D+L +M E
Sbjct: 164 LINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERN 223
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK-NRYTDNA 120
+ DV++Y++++ L + G D A +F++M + T+N ++ GLCK ++ D A
Sbjct: 224 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGA 283
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + + VP ++T+N+L+ K G+L+ A + KE+ G +PN ITY T+M
Sbjct: 284 L-LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG 342
Query: 181 -CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
C +NR + +L M R + D + ++I + + R+ + + G+
Sbjct: 343 YCMQNRLSEAN-NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 401
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ V+Y+ L+ +C+ GK++ A L EM G D T+ IL+DGLC G ++ A
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
E + K D + Y I++ + K GK++ A N+F S+ K + TY+ M+ LCK
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 521
Query: 356 KRLPSASKLL 365
L A+ LL
Sbjct: 522 GSLSEANILL 531
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 206/408 (50%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ +C+ Y++L ++ + G PD T+N+LI G +S ++ L+D M+E
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVEN 187
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YNS+++ + + G A + + M ++ T++ +++ LC++ D A
Sbjct: 188 GCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +F+ ++ G +VTYN L++GLCKAG+ +LK++ PN IT+ ++
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + E+ M +G + + Y T++ + RL EA + ++ MV + D
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV++ +LI YC +++ + + K+G + T++IL+ G C++G IK A +
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAK 356
M G ++ Y ++D L +GK++ A+ +FE ++ Y++++ +CK
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++ A L S GV+ ++ GL G EA + K+
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 169/337 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID+ C+ DA ++ M GI VVTYNSL+ G + + LL +M+
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V ++N L+ + GK EAN ++++MI ++P T+N +++G C A
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + ++ P++VT+ LIKG C R+ + + + G NA+TY+ +++
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ K KL E+ M G D Y ++ G+L++A + E + + L I
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V Y T+I CK GK+E A+ L + +G + + T+T++I GLCK G++ A + L
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
M + G N YN ++ +DG + + + E M+
Sbjct: 534 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 149/286 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D + + + M GISP+++TYN+L+ G + LS + ++LD M+
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PD+ ++ SL+ + + D+ +VF+++ L T++I++ G C++ A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ + HG +P+++TY IL+ GLC G+L A I ++L S + YTTI++
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + + ++ KG + Y +I+ K G L EA + +M DG +
Sbjct: 483 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 542
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+YNTLI + ++G L A+ L++EM+ GF D + ++ID L
Sbjct: 543 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 192/407 (47%), Gaps = 18/407 (4%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D + M + P +V ++ + R + LD ++ GI ++++ N +
Sbjct: 70 DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
++C + K A V ++ P T TFN ++NGLC A+ + + ++G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGC 189
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P++VTYN ++ G+C++G A +L+++ + + TY+TI+ R+ +
Sbjct: 190 QPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ M+ KG Y +++ K G+ + ++ MV+ + +++++N L++++
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM--NK-----I 305
KEGKL+ A L EM +G + T+ L+DG C + A L+ M NK +
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 361
F S ++ Y C+V R +D + VF ++ V ++ TYS +V C++ ++ A
Sbjct: 370 TFTSLIKGY-CMVKR------VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+L + GV ++DGL +G +A +I ++ +K+
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 137/289 (47%), Gaps = 4/289 (1%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K D+A +FQ+MI P F+ + + + + + L + L+ +G + T N
Sbjct: 68 KKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
I+I C+ + A +L ++ G+ P+ T+ T++ K + ++ M
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVEN 187
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G D Y +++ + G A D + +M V+ D+ +Y+T+I+ C++G ++AA
Sbjct: 188 GCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
L EME +G + T+ L+ GLCKAG L L+ M N+ +N ++D
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
K+GK+ A +++ M + + TY++++ C RL A+ +L
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 94/195 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +CQ + M G+ PDV+TY L+ G N L +L++ +++ +
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ + Y +++ + + GK ++A +F + C + P T+ +M++GLCK A
Sbjct: 468 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ R +++ G P TYN LI+ + G L + +++E+ G + +A + ++
Sbjct: 528 NILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDM 587
Query: 181 CFRNRKYKLGLEILS 195
K L++LS
Sbjct: 588 LLSGELDKSFLDMLS 602
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 208/407 (51%), Gaps = 4/407 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C+ ++ M + + PD TYN +I+G + ++ ++ L +EM +
Sbjct: 272 ILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENL 331
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PDV +YN+L++ F+ G +E ++ ++M + P + T+N+M+ K D
Sbjct: 332 KLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEV 391
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ R +++ G +P++VTYN LI CK G++ A ++ E+G G + +T T+++
Sbjct: 392 DKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRA 451
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R RK ++L + +R+GY D Y T+I + K + +A ++M +
Sbjct: 452 LCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPS 511
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++YN++I C+ GK A LDE+ + G D+ T+ +I G C+ G ++ A
Sbjct: 512 IITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHN 571
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + F ++ N ++ L K+G ++ A+ +F + K D+ +Y++++ +LCK K
Sbjct: 572 KMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEK 631
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
R A LL + + A++ GL +G ++A++ SKI
Sbjct: 632 RFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKI 678
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 197/382 (51%), Gaps = 4/382 (1%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G+ + ++N LI G+ + ++ +L +M + G PPD +YN+++ L + G+ +EA
Sbjct: 192 GVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEA 251
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+ DM L P TFNI++ G C+ + A + + ++ VP+ TYN++I G
Sbjct: 252 RDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISG 311
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
CK GR+ A + +E+ + +P+ +TY T++ CF + + G +++ M+ +G +
Sbjct: 312 FCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPN 371
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y ++ FVK G++ E + +M G DIV+YNTLI+ +CK GK++ A+ L+D
Sbjct: 372 SVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMD 431
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM ++G + D T ++ LC+ + A L + G+ + +Y ++ K
Sbjct: 432 EMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHE 491
Query: 326 KIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
K A+ +++ M+ K+ TY+SM+ LC+ + A L L+SG+ +
Sbjct: 492 KASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYN 551
Query: 382 AVVDGLRHSGCRREAKKIQSKI 403
++ G G +A + +K+
Sbjct: 552 TIIHGYCQEGQVEKAFQFHNKM 573
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 185/365 (50%), Gaps = 4/365 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C F +L +MR+ G PD +TYN+++ G + L+ + DLL +M
Sbjct: 202 ILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNK 261
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ ++N L+ +LG EA V + M + P T+N+M++G CK A
Sbjct: 262 GLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEA 321
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+R+ ++ P++VTYN LI G + G +++E+ G PN++TY ++K
Sbjct: 322 MRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKW 381
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + + M+ G D Y T+I+ K+G++ EA M++M G+++D
Sbjct: 382 FVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMD 441
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+ NT++ C+E KL+ A+ LL ++G+ D+ ++ LI G K A +
Sbjct: 442 DVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWD 501
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN----VFESMEVKDSFTYSSMVHNLCKAK 356
M + ++ YN ++ L + GK + AI+ + ES V D TY++++H C+
Sbjct: 502 EMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEG 561
Query: 357 RLPSA 361
++ A
Sbjct: 562 QVEKA 566
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 168/328 (51%), Gaps = 9/328 (2%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE---ANRVFQDMICGDLTPCTATFNIMLN 109
+ + M +G+ P + + N+L++ L + + VF D I + T +FNI+++
Sbjct: 146 IFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFNILIH 205
Query: 110 GLC-KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
G C +NR+ + A+R+ ++ +G P+ +TYN ++ GLCK GRL AR +L ++ + G
Sbjct: 206 GSCMENRFGE-AIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLF 264
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
PN T+ ++ C R K ++ M + D + Y +I+ F K GR+ EA
Sbjct: 265 PNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRL 324
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
E+M + D+V+YNTLIN + G E + L++EME +G + + T+ +++ K
Sbjct: 325 REEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVK 384
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 344
G + + M + G ++ YN ++ K GK+D A + + M K D T
Sbjct: 385 KGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVT 444
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++M+ LC+ ++L A LL S + G
Sbjct: 445 LNTMLRALCRERKLDEAHDLLCSARRRG 472
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 179/391 (45%), Gaps = 43/391 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ + S + G+ ++ M G+ P+ VTYN ++ + + + +M E G
Sbjct: 343 LINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESG 402
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD--- 118
PD+ +YN+L+ ++GK DEA R+ +M L T N ML LC+ R D
Sbjct: 403 CLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAH 462
Query: 119 --------------------------------NALRMFRGLQKHGFVPELVTYNILIKGL 146
ALR++ +++ +P ++TYN +I GL
Sbjct: 463 DLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGL 522
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C+ G+ A L EL +SG P+ ITY TI+ + + + + + M K + D
Sbjct: 523 CQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDV 582
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
T++ K G L++A ++ G +D VSYNT+I CKE + A+ LL+E
Sbjct: 583 VTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEE 642
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
ME++ D YT+ ++ GL AG +K A E+++KI E N ++ LGK +
Sbjct: 643 MEEKKLGPDCYTYNAILGGLTDAGRMKDAE---EFISKIAEKGKSE--NQFLE-LGK--R 694
Query: 327 IDHAINVFESMEVKDSFTYSSMVHNLCKAKR 357
D + ++ YS+ ++ LC R
Sbjct: 695 QDARTSEIPQEPHPNAIAYSNKINELCSQGR 725
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 78/194 (40%), Gaps = 42/194 (21%)
Query: 213 IAAFVKIGRLKEATDYMEQM----------------------------------VTD--- 235
I A+V GR +A +M TD
Sbjct: 131 IGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIK 190
Query: 236 -GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
GV+++ S+N LI+ C E + A +L +M G D T+ ++DGLCK G +
Sbjct: 191 IGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNE 250
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVH 350
AR L M G N +N +V + G + A NV E M V D++TY+ M+
Sbjct: 251 ARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMIS 310
Query: 351 NLCKAKRLPSASKL 364
CK R+ A +L
Sbjct: 311 GFCKQGRIAEAMRL 324
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 199/417 (47%), Gaps = 28/417 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD------ 55
LI AYC+ + Y +L +M + G P V YN LI G N L SLD+L+
Sbjct: 375 LIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP-SLDVLELAEKAY 433
Query: 56 -EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
EML+ + + + ++L CL GK ++A + ++M+ P T+T++ ++ LC
Sbjct: 434 GEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNA 493
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
DNA +F ++ + VP++ TY ILI CK G L+ AR E+ G APN +TY
Sbjct: 494 SKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTY 553
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM-- 232
T ++ + RK E+ M +G + Y +I K G++++A +M
Sbjct: 554 TALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRG 613
Query: 233 ------------VTDGVQLD--IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
+ DG D I +Y L++ CK K++ A LLD M +G E +
Sbjct: 614 NADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIV 673
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+ LIDG CK G + A++ M++ G+ N+ Y+ ++DRL KD ++D A+ V M
Sbjct: 674 YDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRML 733
Query: 339 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ Y+ M+ LCK + A +L+ + G A++DG +G
Sbjct: 734 ENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAG 790
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 198/461 (42%), Gaps = 61/461 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C+ F+ L+RMR + P+VVTY L+ G R L +L M+ G
Sbjct: 305 MISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEG 364
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT---- 117
P +NSL+H + G A ++ + M P +NI++ G+C N
Sbjct: 365 CYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLD 424
Query: 118 -------------------------------------DNALRMFRGLQKHGFVPELVTYN 140
+ A + R + GF+P+ TY+
Sbjct: 425 VLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYS 484
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
+I LC A ++ A + +E+ + P+ TYT ++ + + + M R
Sbjct: 485 KVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD 544
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G + Y +I A++K ++ A + E M+++G ++V+Y LI+ +CK G++E A
Sbjct: 545 GCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKA 604
Query: 261 YLLLDEMEKQG--------FECDK--------YTHTILIDGLCKAGNIKGARLHLEYMNK 304
+ M F+ D +T+ L+DGLCKA +K AR L+ M+
Sbjct: 605 CQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSV 664
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPS 360
G + N Y+ ++D K GK+D A VF M + + +TYSS++ L K KRL
Sbjct: 665 EGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDL 724
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
A K+L L++ ++DGL G EA ++ S
Sbjct: 725 ALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 185/384 (48%), Gaps = 22/384 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID++C+ + M G +P+VVTY +LI + +S + +L + ML
Sbjct: 520 ILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSE 579
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMIC---------------GDL-TPCTA 102
G P+V +Y +L+ HC + G+ ++A +++ M G++ P
Sbjct: 580 GCIPNVVTYTALIDGHC--KSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIF 637
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
T+ +++GLCK A + + G P + Y+ LI G CK G+L A+ + ++
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM 697
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
+ G+ PN TY++++ F++++ L L++LS M + Y +I K+G+
Sbjct: 698 SERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
EA M M G ++V+Y +I+ + K GK++ L+ +M +G + T+ +L
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI--NVFESMEVK 340
I+ C AG + A L+ M + + ++ Y +++ ++ I + + E++ V
Sbjct: 818 INHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVP 877
Query: 341 DSFTYSSMVHNLCKAKRLPSASKL 364
Y ++ + CKA RL A +L
Sbjct: 878 IIPAYRILIDSFCKAGRLELALEL 901
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 173/416 (41%), Gaps = 50/416 (12%)
Query: 35 NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 94
N LI RN L + +L+ L + ++G P +YN+L+ + + D A V ++M
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
T ++ LCK AL + ++K F + V Y +I GLC+A
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLFEE 317
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
A L + S PN +TY ++ C R R+ ILS M +G + ++I
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI-------------------------- 248
A+ + G A +++M G Q V YN LI
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437
Query: 249 ------------NL---YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
NL C GK E AY ++ EM +GF D T++ +I LC A +
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-----FTYSSM 348
A L E M ++ Y ++D K G + A F+ M V+D TY+++
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEM-VRDGCAPNVVTYTAL 556
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+H KA+++ SA++L L G A++DG SG +A +I +++R
Sbjct: 557 IHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMR 612
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 170/407 (41%), Gaps = 44/407 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ ++ L R+++ G P +TYN+L+ L + + EM +
Sbjct: 202 VLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDS 261
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEA------------NRVFQDMICG------------- 95
G D ++ +H L + G+ EA ++ MI G
Sbjct: 262 GFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDF 321
Query: 96 -------DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
P T+ I+L G + R R+ + G P +N LI C+
Sbjct: 322 LSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCR 381
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS-AMKRKGYTFDG- 206
+G A +LK++GD G P + Y ++ N K L++L A K G D
Sbjct: 382 SGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP-SLDVLELAEKAYGEMLDAH 440
Query: 207 -----FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ G+ ++A + +M++ G D +Y+ +I L C K++ A+
Sbjct: 441 VVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAF 500
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
LL +EM+ D +T+TILID CK G ++ AR + M + G N+ Y ++
Sbjct: 501 LLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAY 560
Query: 322 GKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 364
K K+ A +FE M + + TY++++ CK+ ++ A ++
Sbjct: 561 LKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI 607
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 7/232 (3%)
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
Y+ L++ L G R L+E+ D +++ C RN + + LE L +
Sbjct: 164 VYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRL 223
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K GY Y ++ F++ RL A +M G +D + ++L CK G+
Sbjct: 224 KDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRW 283
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A L+ EK+ F+ D +T +I GLC+A + A L M N+ Y +
Sbjct: 284 REALALI---EKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRIL 340
Query: 318 VDRLGKDGKIDHAINVFESMEVKDSFT----YSSMVHNLCKAKRLPSASKLL 365
+ + ++ + M + + ++S++H C++ A KLL
Sbjct: 341 LCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLL 392
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 19/180 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C D + +L+ M++ + Y +I G R ++S L LLDE+ E
Sbjct: 816 VLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIIS--LGLLDEIAEN 873
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA-------TFNIMLNGLCK 113
P + +Y L+ + G+ + A + + M + CT+ ++ ++ L
Sbjct: 874 VAVPIIPAYRILIDSFCKAGRLELALELHKXM-----SSCTSYSAADKDLYSSLIESLSL 928
Query: 114 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR-LRTARW----ILKELGDSGHA 168
D A ++ + K G +PEL + L+KGL + R L W + + +GHA
Sbjct: 929 ASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRTLCXTTWASYYLWGQSAATGHA 988
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 191/398 (47%), Gaps = 3/398 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C +L +M +G+ P+VV Y+ LI + + LLD M G
Sbjct: 444 MINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSG 503
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD++ YN+++ CL + GK +EA+ ++ L P TF + G K A
Sbjct: 504 VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAA 563
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ F + HG +P Y +LI G KAG L A I + L G P+ T + +
Sbjct: 564 KYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGL 623
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N + + L++ S +K KG D F Y ++I+ F K G +++A + ++M G+ +I
Sbjct: 624 LKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 683
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
YN L++ CK G ++ A L D M ++G E D T++ +IDG CK+ N+ A
Sbjct: 684 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 743
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---DSFTYSSMVHNLCKAKRL 358
M G + YN +V K+G ++ A+N+F M K + ++++++ CK+ ++
Sbjct: 744 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKI 803
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
AS+L + + V+D +G EA
Sbjct: 804 QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEA 841
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 193/397 (48%), Gaps = 4/397 (1%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
C+ + M++ G+ PD ++LI G R + L + D M+ GIP ++
Sbjct: 309 CRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINL 368
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
+YN L+H L + GK ++A + + M+ P + TF +++ G C+ AL +
Sbjct: 369 ITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDE 428
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
++K VP V+Y +I GLC L A +L+++ SG PN + Y+ ++ +
Sbjct: 429 MEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGR 488
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
+ +L M G D F Y +I+ K G+++EA+ Y+ ++ G++ D V++
Sbjct: 489 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 548
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
I Y K GK+ A DEM G + +T+LI+G KAGN+ A ++ +G
Sbjct: 549 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALG 608
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSAS 362
+++ + + L K+G++ A+ VF ++ V D FTYSS++ CK + A
Sbjct: 609 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 668
Query: 363 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+L G+ A+VDGL SG + A+K+
Sbjct: 669 ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKL 705
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 192/403 (47%), Gaps = 5/403 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ + +L+ M + + P V+Y ++I G LS + LL++M
Sbjct: 408 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 467
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V Y+ L+ G+ +EA R+ M C + P +N +++ L K + A
Sbjct: 468 GLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 527
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+Q G P+ VT+ I G K G++ A E+ D G PN YT ++
Sbjct: 528 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 587
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+ L I + G D I +K GR++EA ++ G+ D
Sbjct: 588 HFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 647
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +Y++LI+ +CK+G++E A+ L DEM +G + + + L+DGLCK+G+I+ AR +
Sbjct: 648 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 707
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + G + + Y+ ++D K + A ++F M K SF Y+++VH CK
Sbjct: 708 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 767
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ A L L+ G S ++DG S +EA ++
Sbjct: 768 DMEKAMNLFREMLQKGFATTLSFN-TLIDGYCKSCKIQEASQL 809
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 199/408 (48%), Gaps = 5/408 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ + + + +I R+ G+ PDV T ++ I G +N + +L + E+ E
Sbjct: 583 VLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK 642
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+SL+ + G+ ++A + +M + P +N +++GLCK+ A
Sbjct: 643 GLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRA 702
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F G+ + G P+ VTY+ +I G CK+ + A + E+ G P++ Y ++
Sbjct: 703 RKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 762
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + + + + M +KG+ + T+I + K +++EA+ ++M+ + D
Sbjct: 763 CCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 821
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+Y T+I+ +CK GK+E A LL EM+++ D T+T L+ G K G E
Sbjct: 822 HVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFE 881
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS----MVHNLCKAK 356
M G + Y ++ K+ + A + + + K T + ++ LCK +
Sbjct: 882 KMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRE 941
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
L ASKLL + G++ +A +V +G EA ++ ++
Sbjct: 942 DLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVK 989
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 173/371 (46%), Gaps = 38/371 (10%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + ++E G+ PDV TY+SLI+G + + + +L DEM GI P+++ YN+L+ L
Sbjct: 635 VFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLC 694
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G A ++F M L P + T++ M++G CK+ A +F + G P
Sbjct: 695 KSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF 754
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHA----------------------------- 168
YN L+ G CK G + A + +E+ G A
Sbjct: 755 VYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMI 814
Query: 169 -----PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
P+ +TYTT++ + K + + M+ + D Y +++ + K+G+
Sbjct: 815 AKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSS 874
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
E E+MV GV+ D V+Y +I +CKE L A+ L DE+ +G H +LI
Sbjct: 875 EVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLI 934
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----V 339
LCK ++ A L+ M ++G +L A N +V + GK+D A VFE ++ V
Sbjct: 935 TALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLV 994
Query: 340 KDSFTYSSMVH 350
D+ T +V+
Sbjct: 995 PDTTTLIDLVN 1005
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 185/402 (46%), Gaps = 4/402 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID+Y + D + + I ++ NSL+ + ++ + + ML+
Sbjct: 163 ILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDA 222
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ DV++Y L+ L + G A RV +M L P +++++ G+C+ D A
Sbjct: 223 KMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEA 282
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + R + + G VP TY I+ GLC+A R+ A+ +E+ +G P+ + ++
Sbjct: 283 VELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDG 342
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R L I M G + Y +I K G++++A + ++ MVT G + +
Sbjct: 343 FMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPN 402
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++ LI YC+E + A LLDEMEK+ ++ +I+GLC ++ A LE
Sbjct: 403 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 462
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M G N+ Y+ ++ +G+I+ A + + M D F Y++++ L KA
Sbjct: 463 KMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAG 522
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
++ AS LL G++ A + G +G EA K
Sbjct: 523 KMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK 564
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 145/319 (45%), Gaps = 36/319 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+ + + M E G+ PD VTY+++I G ++ ++ + L EM G
Sbjct: 689 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 748
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P + YN+L+H + G ++A +F++M+ T +FN +++G CK+ A
Sbjct: 749 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEAS 807
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F+ + +P+ VTY +I CKAG++ A + KE+ + + +TYT++M
Sbjct: 808 QLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGY 867
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK--------------IGR------ 221
+ + + M KG D Y VI A K +G+
Sbjct: 868 NKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKG 927
Query: 222 ---------------LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
L EA+ +++M G++ + + NTL+ + + GK++ A + +
Sbjct: 928 TIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEG 987
Query: 267 MEKQGFECDKYTHTILIDG 285
++ G D T L++G
Sbjct: 988 VKSLGLVPDTTTLIDLVNG 1006
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 130/309 (42%), Gaps = 4/309 (1%)
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
F+I+++ + D A +F + + L+ N L+K L K G + +
Sbjct: 159 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNG 218
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ D+ + TYT ++ + + +L M KG + F Y VI ++G
Sbjct: 219 MLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGD 278
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
+ EA + M G+ + +Y + C+ ++ A L +EM+K G + D +
Sbjct: 279 IDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSA 338
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV-- 339
LIDG + G+I + M G NL YN ++ L K GK++ A + + M
Sbjct: 339 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLG 398
Query: 340 --KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
+S T+ ++ C+ + A +LL K + + A+++GL H A
Sbjct: 399 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLAN 458
Query: 398 KIQSKIRMA 406
K+ K+ +
Sbjct: 459 KLLEKMTFS 467
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 65/127 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I A+C+ + + + + + G+ ++ LI + L+ + LLDEM E+
Sbjct: 897 LVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGEL 956
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P + + N+L+ + GK DEA RVF+ + L P T T ++NG + +++A
Sbjct: 957 GLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDA 1016
Query: 121 LRMFRGL 127
+ + L
Sbjct: 1017 RNLIKQL 1023
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
+ + +M G+ PD VTY +I + L + L DE++ G+ ++ L+
Sbjct: 877 FALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITA 936
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
L + EA+++ +M L P A N ++ + D A R+F G++ G VP+
Sbjct: 937 LCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPD 996
Query: 136 LVTYNILIKGLCKAGRLRTARWILKEL 162
T L+ G AR ++K+L
Sbjct: 997 TTTLIDLVNGNLNDTDSEDARNLIKQL 1023
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 188/403 (46%), Gaps = 39/403 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ + D + + +RM + G P+ VTY++LI G L ++D+L+EM++ G
Sbjct: 243 LIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKG 302
Query: 62 IPP-----------------------------------DVWSYNSLMHCLFQLGKPDEAN 86
I P +V +Y +L+ L + GK + A
Sbjct: 303 IEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAI 362
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
V+ M+ L P T++ ++N L + AL +F + H +P TYN++IKG
Sbjct: 363 GVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGF 422
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C G ++ A I ++ +G +PN ITY I+ F+ + +L MK G D
Sbjct: 423 CSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDT 482
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ Y +I+ F + G+L+ A +MV G+ ++V+YN +IN Y K++ A L +
Sbjct: 483 WTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWK 542
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M + G T+ ++I G K I A M K G N+ Y +D L K+G+
Sbjct: 543 MVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGR 602
Query: 327 IDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLL 365
A +F M+ +D F TYSS++ LC+ + A +LL
Sbjct: 603 TSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLL 645
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 189/391 (48%), Gaps = 4/391 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
I+ + G PD TY SLI G +N L + ++ D M++ G P+ +Y++L++ L
Sbjct: 224 IMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLC 283
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
G+ +EA + ++MI + P + I + LC + A+++ ++K G P +
Sbjct: 284 SEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQ 343
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY LI GL + G+ A + ++ G P A+TY+ ++ + +++ L I M
Sbjct: 344 TYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWM 403
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ Y +I F IG +++AT +QM+ G ++++YN +I++Y K+G +
Sbjct: 404 LSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYM 463
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A LL+ M+ G + D +T+ LI G + G ++ A M + G N+ YN I
Sbjct: 464 NNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAI 523
Query: 318 VDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
++ K+D A+ +F ES V S TY+ M+ K R+ A +K G+
Sbjct: 524 INGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGL 583
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ +DGL +G A KI +++
Sbjct: 584 LPNVITYTSFIDGLCKNGRTSLAFKIFHEMK 614
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 202/429 (47%), Gaps = 48/429 (11%)
Query: 13 DAGYT-----ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 67
DAG + +L +M++ G P+V TY +LI+G +R+ ++ + +ML G+ P
Sbjct: 319 DAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAV 378
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+Y++L++ L+ G+ + A +F+ M+ D P T T+N+++ G C Y A +F +
Sbjct: 379 TYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQM 438
Query: 128 QKHGFVPELVTYNI-----------------------------------LIKGLCKAGRL 152
K G P ++TYNI LI G + G+L
Sbjct: 439 LKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKL 498
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
A + E+ + G +PN +TY I+ K L + M G Y +
Sbjct: 499 EHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMM 558
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I+ F K R+ EA ++ +MV G+ ++++Y + I+ CK G+ A+ + EM+K+ +
Sbjct: 559 ISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDY 618
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
+ T++ LIDGLC+ G + A E + G + N++ Y +V L G+ A
Sbjct: 619 FPNLCTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQ 674
Query: 333 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
+ ESM+ K Y +++ CK + SA K+ S + +G + S KA++ L
Sbjct: 675 LVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALC 734
Query: 389 HSGCRREAK 397
+ R++A+
Sbjct: 735 KANFRQKAQ 743
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 194/411 (47%), Gaps = 8/411 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I +C I ++M +AG SP+V+TYN +I + ++ ++ LL+ M
Sbjct: 417 VIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGN 476
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ D W+Y +L+ + GK + A +F +M+ ++P T+N ++NG D+A
Sbjct: 477 GLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDA 536
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F + + G VP TYN++I G K R+ A ++ G PN ITYT+ +
Sbjct: 537 LALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDG 596
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+N + L +I MK++ Y + Y ++I + G+ ++A E+++ DG + +
Sbjct: 597 LCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDA----ERLLDDGCEPN 652
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +Y TL+ C +G+ A L++ M+K+G + + + L+ G CK ++ A +
Sbjct: 653 VDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFD 712
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M GF L Y ++ L K A +F++M K D ++ ++ L K
Sbjct: 713 SMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEG 772
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
+ +LL + + + L GC E +I ++ + K
Sbjct: 773 ETDLSLELLHVMESRNCTLNFQTRVMLARELSALGCSIEIPQISKQLGIVK 823
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 156/363 (42%), Gaps = 45/363 (12%)
Query: 66 VWSYNSLMHCLFQLGKPDE---ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
++S+++L L QLGK D V+ +M+ + P TFN M+ LC A
Sbjct: 167 LYSFSTL---LIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAEL 223
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CC 181
+ + +G P+ TY LI G CK G L A + + G PN++TY+ ++ C
Sbjct: 224 IMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLC 283
Query: 182 FRNR---------------------KYKL-------------GLEILSAMKRKGYTFDGF 207
R Y + +++L MK++G +
Sbjct: 284 SEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQ 343
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y +I+ + G+ + A +M+ DG+ V+Y+ LIN EG+ E A + + M
Sbjct: 344 TYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWM 403
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
+ T+ ++I G C G I+ A + M K G N+ YN I+ K G +
Sbjct: 404 LSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYM 463
Query: 328 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
++A+ + E M+ D++TY++++ + +L A L ++ G+ A+
Sbjct: 464 NNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAI 523
Query: 384 VDG 386
++G
Sbjct: 524 ING 526
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 36/231 (15%)
Query: 177 IMKCCFRNRKYKLGLEILSAMKRK---GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
++K C + K +++LS + GYT + + T++ K D +M+
Sbjct: 137 MIKSCRNEGEVKRVIQVLSEINTTYDFGYTL--YSFSTLLIQLGKFDMDGLGRDVYIEML 194
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
G++ ++ ++N +I + C +GK++ A L++ + G D +T+T LI G CK GN+
Sbjct: 195 NSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLD 254
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLC 353
A + M K G D N S TYS++++ LC
Sbjct: 255 LAFEMFDRMVKDGCDPN-------------------------------SVTYSALINGLC 283
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
RL A +L + G+ A + L +G EA K+ K++
Sbjct: 284 SEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMK 334
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 184/387 (47%), Gaps = 15/387 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I CQ D + +M E +SPD +Y LI G + L+ + +L ++L
Sbjct: 293 IVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHS 352
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P +Y SL+H L D+A +F DM P T+N+M++ CK + A
Sbjct: 353 GVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEA 412
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM-- 178
+ + + + G VP++VTYN ++ GLCK+ R+ A + E+ G PN ++ TI+
Sbjct: 413 CDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILG 472
Query: 179 --------KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
+ C R K +L M G+ D Y T+I+ I R+ +A +E
Sbjct: 473 LCQQSKIDQACQRG-KLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 531
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
MV + +V+ NTLI+ CK G+++ A +LD M G D T+ L+ G C+AG
Sbjct: 532 DMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 591
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 346
+ AR L M G N+ Y +V L K ++ A VF M+ + FTY+
Sbjct: 592 QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYT 651
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGV 373
+++ C A ++ KL + +G+
Sbjct: 652 ALILGFCSAGQVDGGLKLFGEMVCAGI 678
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 199/395 (50%), Gaps = 25/395 (6%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
L RE P +VT N L+ G + + +LL M + PD SY +++ L +
Sbjct: 200 LQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCK 259
Query: 79 LGKPDEANRVFQDMICGDLTPCTAT------FNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
G+ +EA R+F D + +++ +NI++ GLC+N D A++MF + +
Sbjct: 260 AGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNV 319
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P+ +Y ILI GL KAG+L AR + ++L SG P+ + YT+++ + E
Sbjct: 320 SPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARE 379
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ + M R+G Y +I A K G L+EA D +++M+ DG D+V+YNT+++ C
Sbjct: 380 LFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLC 439
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA----------RLHLEYM 302
K ++E A LL +EME+ G ++ +H +I GLC+ I A RL L+ M
Sbjct: 440 KSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRL-LKRM 498
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRL 358
G ++ Y+ ++ L ++D A ++ E M + T ++++H LCKA R+
Sbjct: 499 TDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRI 558
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 393
A ++L + + SG +S + L H CR
Sbjct: 559 KEAREVLDAMVSSG----QSPDVVTYNTLVHGHCR 589
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 172/358 (48%), Gaps = 30/358 (8%)
Query: 34 YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
YN +I G +N + ++ + ++M E + PD WSY L+ L + GK ++A +FQ ++
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLL 350
Query: 94 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 153
+TP T + +++GLC D+A +F + + G P VTYN++I CK G L
Sbjct: 351 HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLE 410
Query: 154 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
A ++K++ + GH P+ +TY T+M ++ + + L + + M+R G T + + T+I
Sbjct: 411 EACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTII 470
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ ++ +A C+ GKL+ A+ LL M G
Sbjct: 471 LGLCQQSKIDQA--------------------------CQRGKLDEAFRLLKRMTDDGHV 504
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
D T++ LI GLC + AR LE M K + N ++ L K G+I A V
Sbjct: 505 PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 564
Query: 334 FESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
++M + D TY+++VH C+A + A +LL + G+ A+V GL
Sbjct: 565 LDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGL 622
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 162/335 (48%), Gaps = 8/335 (2%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
ID CQ D + +L RM + G PDVVTY++LI+G + + + LL++M++
Sbjct: 479 IDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC 538
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P V + N+L+H L + G+ EA V M+ +P T+N +++G C+ T+ A
Sbjct: 539 KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARE 598
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ + G P +VTY L+ GLCKA RL A + ++ SG APN TYT ++
Sbjct: 599 LLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFC 658
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM----EQMVTDGVQ 238
+ GL++ M G + D Y T+ A K GR A + + E + ++
Sbjct: 659 SAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWG 718
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
++ Y ++ + GK+E A + +M + G L+ GLCK+G AR
Sbjct: 719 DEV--YRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAV 776
Query: 299 LEYMNKIGFDSNL--EAYNCIVDRLGKDGKIDHAI 331
LE + + + +A + + +GK +I+ A+
Sbjct: 777 LEEIMDLAYGGKARGKAAKFVEEMVGKGYEIEDAV 811
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 160/348 (45%), Gaps = 13/348 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL--SCSLDLLDE--- 56
++D C+ + + N M G +P+ ++N++I G + S + +C LDE
Sbjct: 434 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFR 493
Query: 57 ----MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 112
M + G PDV +Y++L+ L + + D+A + +DM+ P T N +++GLC
Sbjct: 494 LLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLC 553
Query: 113 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
K A + + G P++VTYN L+ G C+AG+ AR +L ++ G APN +
Sbjct: 554 KAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVV 613
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
TYT ++ + + + + MK G + F Y +I F G++ +M
Sbjct: 614 TYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEM 673
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY---THTILIDGLCKA 289
V G+ D V Y TL CK G+ A +L E ++ + + + +DGL +A
Sbjct: 674 VCAGISPDHVVYGTLAAELCKSGRSARALEILRE-GRESLRSEAWGDEVYRFAVDGLLEA 732
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
G ++ A + M + G E +V L K G+ A V E +
Sbjct: 733 GKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 780
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 118/520 (22%), Positives = 212/520 (40%), Gaps = 125/520 (24%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID+ + +A ++ M + G PD T+ +++ G + + + ++DEM
Sbjct: 49 VLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSR 108
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
IPP + + L H L G + A ++ + M + ++ +NI++ LCK D+A
Sbjct: 109 MIPPYFATSSFLAHELCLRGSMERAFQLLEIMPVAN----SSAYNIVVVALCKAARVDDA 164
Query: 121 LRMFR-------------------GLQKHGFV-------------PELVTYNILIKGLCK 148
L + R GL G + P LVT N+L++G C
Sbjct: 165 LELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCS 224
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMK--C----------CFRNRKYK-------- 188
G++ AR +L+ + D AP+ ++Y T++ C F +R+
Sbjct: 225 RGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSS 284
Query: 189 -----------LGL----------EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
LGL ++ M + + D + Y +I K G+L +A +
Sbjct: 285 PPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARN 344
Query: 228 YMEQMVTDGVQLDI-----------------------------------VSYNTLINLYC 252
++++ GV V+YN +I+ C
Sbjct: 345 LFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASC 404
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K G LE A L+ +M + G D T+ ++DGLCK+ ++ A L M ++G N
Sbjct: 405 KRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRR 464
Query: 313 AYNCI---------VDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLP 359
++N I +D+ + GK+D A + + M V D TYS+++ LC R+
Sbjct: 465 SHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 524
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
A LL +K + Q ++ GL +G +EA+++
Sbjct: 525 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 564
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 165/378 (43%), Gaps = 57/378 (15%)
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNR 115
M + GI P + S++ +G+ EA ++F M C +P +N++++ L K +
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECH--SPYPDVYNVLIDSLSKRQ 58
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
T+ +M + + G P+ T+ ++ GLCKAG++ A ++ E+ P T +
Sbjct: 59 ETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSS 118
Query: 176 TIM-KCCFR---NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 231
+ + C R R ++L LEI+ Y V+ A K R+ +A +
Sbjct: 119 FLAHELCLRGSMERAFQL-LEIMPVANSSAYNI-------VVVALCKAARVDDALELART 170
Query: 232 M------------------VTDGVQLD--------------IVSYNTLINLYCKEGKLEA 259
M + D ++D +V+ N L+ +C G+++
Sbjct: 171 MSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDK 230
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK------GARLHLEYMNKIGFDSNLEA 313
A LL M + D+ ++ ++DGLCKAG ++ G R + +L
Sbjct: 231 ARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRG 290
Query: 314 YNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 369
YN ++ L ++ +ID A+ +FE M + DS++Y ++ L KA +L A L L
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLL 350
Query: 370 KSGVRILKSAQKAVVDGL 387
SGV A +++ GL
Sbjct: 351 HSGVTPSTVAYTSLIHGL 368
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 198/384 (51%), Gaps = 4/384 (1%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E + D T ++LI G + +L +LDEML PDV +Y L+ +
Sbjct: 153 ERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYK 212
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+A ++ +M TP T+N+++NG+C+ D+A+ + L +G P V+YNI++
Sbjct: 213 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 272
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
KGLC A R A ++ E+G G PN +T+ ++ R + LE+L + + G +
Sbjct: 273 KGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCS 332
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
+ Y ++ AF K ++ +A +++ MV+ G DIVSYNTL+ C+ G+++ A L
Sbjct: 333 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 392
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
L +++ +G ++ +IDGL KAG K A L M G ++ Y+ I L +
Sbjct: 393 LHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR 452
Query: 324 DGKIDHAINVF---ESMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
+ +I+ AI F + M ++ ++ Y++++ LCK + SA L + +G +S
Sbjct: 453 EDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNEST 512
Query: 380 QKAVVDGLRHSGCRREAKKIQSKI 403
+++GL + G +EA+ + ++
Sbjct: 513 YTILIEGLAYEGLIKEARDLLDEL 536
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 179/364 (49%), Gaps = 4/364 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
+L+ M PDVVTY L+ + S ++ LLDEM + G PD+ +YN +++ +
Sbjct: 181 AVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGI 240
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
Q G+ D+A +++ P T ++NI+L GLC ++A + + + G P +
Sbjct: 241 CQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNV 300
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
VT+N+LI LC+ G + A +L+++ G +PN+++Y ++ + +K + L
Sbjct: 301 VTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDL 360
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M +G D Y T++ A + G + A + + Q+ G ++SYNT+I+ K GK
Sbjct: 361 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 420
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+ A LL+EM +G + D T++ + GLC+ I+ A + +G N YN
Sbjct: 421 TKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNA 480
Query: 317 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
I+ L K + AI++F M + + TY+ ++ L + A LL G
Sbjct: 481 IILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540
Query: 373 VRIL 376
IL
Sbjct: 541 EEIL 544
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 167/337 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++A C+ + +L+ MR+ G +PD+VTYN ++ G + + +++ L +
Sbjct: 200 ILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSY 259
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ SYN ++ L + ++A + +M P TFN++++ LC+ + A
Sbjct: 260 GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 319
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + K+G P ++YN L+ CK ++ A L + G P+ ++Y T++
Sbjct: 320 LEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 379
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R+ + + +E+L +K KG Y TVI K G+ KEA + + +MV+ G+Q D
Sbjct: 380 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 439
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++Y+T+ C+E ++E A +++ G + + +I GLCK A
Sbjct: 440 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFA 499
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
YM G N Y +++ L +G I A ++ + +
Sbjct: 500 YMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 536
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 133/281 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ C ++ ++ M + G P+VVT+N LI+ R L+ +L++L+++ +
Sbjct: 270 IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKY 329
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ SYN L+H + K D+A M+ P ++N +L LC++ D A
Sbjct: 330 GCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 389
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + L+ G P L++YN +I GL KAG+ + A +L E+ G P+ ITY+TI
Sbjct: 390 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 449
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + + + ++ G + Y +I K A D M+ +G +
Sbjct: 450 LCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPN 509
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
+Y LI EG ++ A LLDE+ +G E H I
Sbjct: 510 ESTYTILIEGLAYEGLIKEARDLLDELCSRGEEILLDVHLI 550
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 165/367 (44%), Gaps = 45/367 (12%)
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ L + G+ DEA R+ D C A ++ L + T A R+
Sbjct: 74 LRSLVRRGELDEALRLVGSARRPDAGTCAA----LIKKLSASGRTAEARRVLAACG---- 125
Query: 133 VPELVTYNILIKGLCKAGRLRTA-RW-------------------------------ILK 160
P+++ YN ++ G C AG++ A RW +L
Sbjct: 126 -PDVMAYNAMMAGYCGAGQVDAARRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLD 184
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
E+ P+ +TYT +++ + YK +++L M+ KG T D Y V+ + G
Sbjct: 185 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 244
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
R+ +A ++++ + + G + + VSYN ++ C + E A L+ EM ++G + T
Sbjct: 245 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 304
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
+LI LC+ G ++ A LE + K G N +YN ++ K K+D A+ + M +
Sbjct: 305 MLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 364
Query: 341 ----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
D +Y++++ LC++ + A +LL G + + V+DGL +G +EA
Sbjct: 365 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 424
Query: 397 KKIQSKI 403
++ +++
Sbjct: 425 LELLNEM 431
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 208/437 (47%), Gaps = 39/437 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ + + D Y + M + GI P+VVTYNS+IA + + ++++L M++ G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNG 264
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +YNS++H G+P EA + M + P T+N +++ LCKN A
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+MF + K G PE+ TY L++G G L +L + +G PN ++ ++
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD------ 235
+ K + + S M+++G D Y TVI K GR+++A Y EQM+ +
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444
Query: 236 -----------------------------GVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
G+ LD + +N++I+ +CKEG++ + L D
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M + G + + T++ LIDG C AG + A L M +G + YN +++ K +
Sbjct: 505 MVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
++ A+ +F ME D TY+ ++ L + +R +A +L + +SG ++ S
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624
Query: 383 VVDGLRHSGCRREAKKI 399
++ GL + EA ++
Sbjct: 625 ILHGLCKNNLTDEALRM 641
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 195/393 (49%), Gaps = 6/393 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYN 70
DA +L RM + G P+V +YN L+ G + +L+LL M + G PPDV SY
Sbjct: 144 DAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYT 203
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
++++ F+ G D+A + +M+ + P T+N ++ LCK + D A+ + + K+
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKN 263
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G +P TYN ++ G C +G+ + A LK++ G P+ +TY ++M +N +
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
++ +M ++G + Y T++ + G L E ++ MV +G+ + ++ LI
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
Y K+GK++ A L+ +M +QG D T+ +I LCK+G ++ A + E M
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG 443
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
YN ++ L K D A + M + D+ ++S++ + CK R+ + KL
Sbjct: 444 NIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFD 503
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
++ GV+ ++DG +G EA K+
Sbjct: 504 LMVRIGVKPNIITYSTLIDGYCLAGKMDEATKL 536
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 189/402 (47%), Gaps = 4/402 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ YC L +M G+ PDVVTYNSL+ +N + + + D M + G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++ +Y +L+ G E + + M+ + P F+I++ K D A+
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++ G P+ VTY +I LCK+GR+ A +++ D +P I Y +++
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K+ E++ M +G D + ++I + K GR+ E+ + MV GV+ +I
Sbjct: 455 CIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNI 514
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y+TLI+ YC GK++ A LL M G + D T+ LI+G CK ++ A +
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHNLCKAKR 357
M G ++ YN I+ L + + A + + ES + TY+ ++H LCK
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
A ++ + + +++ ++ L G EAK +
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 184/389 (47%), Gaps = 14/389 (3%)
Query: 14 AGYTILNRMREAG---ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
A + NRM AG ++P++ TY LI L L +++ G D ++
Sbjct: 71 AAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFT 130
Query: 71 SLMHCLFQLGKPDEA-NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
L+ L + +A + V + M P ++NI+L GLC + AL + + +
Sbjct: 131 PLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPD 190
Query: 130 HG--FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
G P++V+Y +I G K G L A E+ D G PN +TY +I+ + +
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAM 250
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
+E+L++M + G + Y +++ + G+ KEA ++++M +DGV+ D+V+YN+L
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
++ CK G+ A + D M K+G + + T+ L+ G G + L+ M + G
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASK 363
N ++ ++ K GK+D A+ VF M + D+ TY +++ LCK+ R+ A +
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430
Query: 364 LLLSCLKSGVRILKSAQKAVVDGLRHSGC 392
+ + S V + L HS C
Sbjct: 431 YFEQMIDERL----SPGNIVYNSLIHSLC 455
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 168/358 (46%), Gaps = 43/358 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI AY + D + ++MR+ G++PD VTY ++I ++ + ++ ++M++
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P YNSL+H L K D+A + +M+ + T FN +++ CK +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F + + G P ++TY+ LI G C AG++ A +L + G P+ +TY T++
Sbjct: 499 EKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN- 557
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
GYC KI R+++A +M + GV D
Sbjct: 558 ---------------------------GYC-------KISRMEDALVLFREMESSGVSPD 583
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++YN ++ + + AA L + + G + + T+ I++ GLCK N+ L +
Sbjct: 584 IITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK-NNLTDEALRM- 641
Query: 301 YMNKIGFDSNLE--AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNL 352
+ N D LE +N ++ L K G+ D A ++F ++ V D TYS M NL
Sbjct: 642 FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 699
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 152/312 (48%), Gaps = 2/312 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + C F +D ++ M + GI D + +NS+I + + S L D M+ +G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++ +Y++L+ GK DEA ++ M+ + P T+N ++NG CK ++AL
Sbjct: 510 VKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR ++ G P+++TYNI+++GL + R A+ + + +SG TY I+
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGL 629
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N L + + + + +I A +K+GR EA D + +G+ D+
Sbjct: 630 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDV 689
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y+ + ++G LE L ME+ G + ++ L + G+I A +L
Sbjct: 690 RTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFM 749
Query: 302 MNKIGFDSNLEA 313
+++ F +LEA
Sbjct: 750 IDEKHF--SLEA 759
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 149/331 (45%), Gaps = 11/331 (3%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG--DLTPCTATFNIMLNG 110
+ DE+L G ++ N + + + +R + G ++TP T+ I++
Sbjct: 41 VFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGS 100
Query: 111 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR-WILKELGDSGHAP 169
C D + K GF + + + L+KGLC R A +L+ + G P
Sbjct: 101 CCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIP 160
Query: 170 NAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGY--TFDGFGYCTVIAAFVKIGRLKEAT 226
N +Y ++K C NR + LE+L M G D Y TVI F K G L +A
Sbjct: 161 NVFSYNILLKGLCDENRSQE-ALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+M+ G+ ++V+YN++I CK ++ A +L M K G + T+ ++ G
Sbjct: 220 GTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
C +G K A L+ M+ G + ++ YN ++D L K+G+ A +F+SM + +
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEI 339
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
TY +++ L LL +++G+
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370
>gi|449504220|ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 202/392 (51%), Gaps = 6/392 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ + C+ + ++++M E G + TYNSL+ G + L+ SL LLD +++ G
Sbjct: 138 LVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKG 197
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ ++Y+ L+ ++ DEA+++ ++I P ++N++L GLCK T++A+
Sbjct: 198 LVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAM 257
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++FR L GF P +V+YNIL++ LC GR A +L E+ +P+ +TY ++
Sbjct: 258 QLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSL 317
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + LE+L M R + Y +IA K ++ ++QM+ +
Sbjct: 318 TLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNE 377
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+YN + L C+EG ++ A+ ++ + KQ F ++ + I+I LC+ GN A L
Sbjct: 378 GTYNAIATL-CEEGMVQEAFSIIQSLGNKQHFSTQEF-YKIVITSLCRKGNTYPAFQLLY 435
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---DSFTYSSMVHNLCKAKR 357
M K GF + Y+ ++ L +G ++ AI +F ME D+ Y+S++ CK++R
Sbjct: 436 EMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDTENYNSLILGCCKSRR 495
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
A + + G ++ +V+G+ H
Sbjct: 496 TDLALDVFEIMVGKGYLANETTYTILVEGIIH 527
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 141/284 (49%)
Query: 54 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 113
L+ M+E G PDV+ L++ L + K +A +V + MI + P A++ +++ LC+
Sbjct: 85 LEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCR 144
Query: 114 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
A+++ ++++G+ TYN L++GLC G L + +L L G PNA T
Sbjct: 145 KGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYT 204
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
Y+ +++ ++ R ++L + KG + Y ++ K GR ++A ++
Sbjct: 205 YSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELP 264
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
+ G ++VSYN L+ C EG+ E A +LL EM+ T+ ILI L G +
Sbjct: 265 SKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTE 324
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
A LE M + F +YN I+ RL KD K+D + + M
Sbjct: 325 HALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQM 368
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 2/286 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C+ + + + G SP+VV+YN L+ + LL EM
Sbjct: 242 VLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGD 301
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P +YN L+ L G+ + A V ++MI P +++N ++ LCK+R D
Sbjct: 302 ERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLV 361
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + P TYN I LC+ G ++ A I++ LG+ H Y ++
Sbjct: 362 VKCLDQMMYRHCNPNEGTYNA-IATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R ++L M + G+T D F Y ++I G L EA + M + ++LD
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVM-EENIKLD 479
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+YN+LI CK + + A + + M +G+ ++ T+TIL++G+
Sbjct: 480 TENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGI 525
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 2/268 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ + C ++ +L M SP VTYN LI T + +L++L+EM+
Sbjct: 277 ILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRA 336
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P SYN ++ L + K D + M+ P T+N + LC+ A
Sbjct: 337 RFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIAT-LCEEGMVQEA 395
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + L Y I+I LC+ G A +L E+ G P++ TY+++++
Sbjct: 396 FSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRG 455
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+EI S M+ + D Y ++I K R A D E MV G +
Sbjct: 456 LCMEGMLNEAIEIFSVME-ENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLAN 514
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEME 268
+Y L+ E +++ A +L E++
Sbjct: 515 ETTYTILVEGIIHEKEMDLATEVLRELQ 542
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 104/222 (46%), Gaps = 4/222 (1%)
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K RL A + L+ + + G P+ T ++ + K + ++++ M G D
Sbjct: 74 KELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAA 133
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y ++++ + G + A +++M G + +YN+L+ C G L + LLD +
Sbjct: 134 SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRL 193
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
++G + YT++ L++ K A L+ + G NL +YN ++ L K+G+
Sbjct: 194 IQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRT 253
Query: 328 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
+ A+ +F + K + +Y+ ++ +LC R A+ LL
Sbjct: 254 EDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLL 295
>gi|449453792|ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 202/392 (51%), Gaps = 6/392 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ + C+ + ++++M E G + TYNSL+ G + L+ SL LLD +++ G
Sbjct: 138 LVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKG 197
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ ++Y+ L+ ++ DEA+++ ++I P ++N++L GLCK T++A+
Sbjct: 198 LVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAM 257
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++FR L GF P +V+YNIL++ LC GR A +L E+ +P+ +TY ++
Sbjct: 258 QLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSL 317
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + LE+L M R + Y +IA K ++ ++QM+ +
Sbjct: 318 TLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNE 377
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+YN + L C+EG ++ A+ ++ + KQ F ++ + I+I LC+ GN A L
Sbjct: 378 GTYNAIATL-CEEGMVQEAFSIIQSLGNKQHFSTQEF-YKIVITSLCRKGNTYPAFQLLY 435
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---DSFTYSSMVHNLCKAKR 357
M K GF + Y+ ++ L +G ++ AI +F ME D+ Y+S++ CK++R
Sbjct: 436 EMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDTENYNSLILGCCKSRR 495
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
A + + G ++ +V+G+ H
Sbjct: 496 TDLALDVFEIMVGKGYLANETTYTILVEGIIH 527
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 141/284 (49%)
Query: 54 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 113
L+ M+E G PDV+ L++ L + K +A +V + MI + P A++ +++ LC+
Sbjct: 85 LEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCR 144
Query: 114 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
A+++ ++++G+ TYN L++GLC G L + +L L G PNA T
Sbjct: 145 KGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYT 204
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
Y+ +++ ++ R ++L + KG + Y ++ K GR ++A ++
Sbjct: 205 YSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELP 264
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
+ G ++VSYN L+ C EG+ E A +LL EM+ T+ ILI L G +
Sbjct: 265 SKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTE 324
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
A LE M + F +YN I+ RL KD K+D + + M
Sbjct: 325 HALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQM 368
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 2/286 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C+ + + + G SP+VV+YN L+ + LL EM
Sbjct: 242 VLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGD 301
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P +YN L+ L G+ + A V ++MI P +++N ++ LCK+R D
Sbjct: 302 ERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLV 361
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + P TYN I LC+ G ++ A I++ LG+ H Y ++
Sbjct: 362 VKCLDQMMYRHCNPNEGTYNA-IATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R ++L M + G+T D F Y ++I G L EA + M + ++LD
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVM-EENIKLD 479
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+YN+LI CK + + A + + M +G+ ++ T+TIL++G+
Sbjct: 480 TENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGI 525
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 2/268 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ + C ++ +L M SP VTYN LI T + +L++L+EM+
Sbjct: 277 ILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRA 336
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P SYN ++ L + K D + M+ P T+N + LC+ A
Sbjct: 337 RFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIAT-LCEEGMVQEA 395
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + L Y I+I LC+ G A +L E+ G P++ TY+++++
Sbjct: 396 FSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRG 455
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+EI S M+ + D Y ++I K R A D E MV G +
Sbjct: 456 LCMEGMLNEAIEIFSVME-ENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLAN 514
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEME 268
+Y L+ E +++ A +L E++
Sbjct: 515 ETTYTILVEGIIHEKEMDLATEVLRELQ 542
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 104/222 (46%), Gaps = 4/222 (1%)
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K RL A + L+ + + G P+ T ++ + K + ++++ M G D
Sbjct: 74 KELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAA 133
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y ++++ + G + A +++M G + +YN+L+ C G L + LLD +
Sbjct: 134 SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRL 193
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
++G + YT++ L++ K A L+ + G NL +YN ++ L K+G+
Sbjct: 194 IQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRT 253
Query: 328 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
+ A+ +F + K + +Y+ ++ +LC R A+ LL
Sbjct: 254 EDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLL 295
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 208/437 (47%), Gaps = 39/437 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ + + D Y + M + GI P+VVTY+S+IA + + ++++L M++ G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +YNS++H G+P EA + M + P T+N +++ LCKN A
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+MF + K G PE+ TY L++G G L +L + +G PN ++ ++
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD------ 235
+ K + + S M+++G D Y TVI K GR+++A Y EQM+ +
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444
Query: 236 -----------------------------GVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
G+ LD + +N++I+ +CKEG++ + L D
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M + G + D T++ LIDG C AG + A L M +G + YN +++ K +
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
++ A+ +F ME D TY+ ++ L + +R +A +L + +SG ++ S
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624
Query: 383 VVDGLRHSGCRREAKKI 399
++ GL + EA ++
Sbjct: 625 ILHGLCKNNLTDEALRM 641
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 195/393 (49%), Gaps = 6/393 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYN 70
DA +L RM + G P+V +YN L+ G + +L+LL M + G PPDV SY
Sbjct: 144 DAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYT 203
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
++++ F+ G D+A + +M+ + P T++ ++ LCK + D A+ + + K+
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN 263
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G +P TYN ++ G C +G+ + A LK++ G P+ +TY ++M +N +
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
++ +M ++G + Y T++ + G L E ++ MV +G+ + ++ LI
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
Y K+GK++ A L+ +M +QG D T+ +I LCK+G ++ A + E M
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG 443
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
YN ++ L K D A + M + D+ ++S++ + CK R+ + KL
Sbjct: 444 NIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFD 503
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
++ GV+ ++DG +G EA K+
Sbjct: 504 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKL 536
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 189/402 (47%), Gaps = 4/402 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ YC L +M G+ PDVVTYNSL+ +N + + + D M + G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++ +Y +L+ G E + + M+ + P F+I++ K D A+
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++ G P+ VTY +I LCK+GR+ A +++ D +P I Y +++
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K+ E++ M +G D + ++I + K GR+ E+ + MV GV+ DI
Sbjct: 455 CIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 514
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y+TLI+ YC GK++ A LL M G + D T+ LI+G CK ++ A +
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHNLCKAKR 357
M G ++ YN I+ L + + A + + ES + TY+ ++H LCK
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
A ++ + + +++ ++ L G EAK +
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 185/389 (47%), Gaps = 14/389 (3%)
Query: 14 AGYTILNRMREAG---ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
A + NRM AG ++P++ TY LI L L +++ G D ++
Sbjct: 71 AAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFT 130
Query: 71 SLMHCLFQLGKPDEA-NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
L+ L + +A + V + M P ++NI+L GLC + AL + + +
Sbjct: 131 PLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPD 190
Query: 130 HG--FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
G P++V+Y +I G K G L A E+ D G PN +TY++I+ + +
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
+E+L++M + G + Y +++ + G+ KEA ++++M +DGV+ D+V+YN+L
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
++ CK G+ A + D M K+G + + T+ L+ G G + L+ M + G
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASK 363
N ++ ++ K GK+D A+ VF M + D+ TY +++ LCK+ R+ A +
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430
Query: 364 LLLSCLKSGVRILKSAQKAVVDGLRHSGC 392
+ + S V + L HS C
Sbjct: 431 YFEQMIDERL----SPGNIVYNSLIHSLC 455
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 169/358 (47%), Gaps = 43/358 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI AY + D + ++MR+ G++PD VTY ++I ++ + ++ ++M++
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P YNSL+H L K D+A + +M+ + T FN +++ CK +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F + + G P+++TY+ LI G C AG++ A +L + G P+ +TY T++
Sbjct: 499 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN- 557
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
GYC KI R+++A +M + GV D
Sbjct: 558 ---------------------------GYC-------KISRMEDALVLFREMESSGVSPD 583
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++YN ++ + + AA L + + G + + T+ I++ GLCK N+ L +
Sbjct: 584 IITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK-NNLTDEALRM- 641
Query: 301 YMNKIGFDSNLE--AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNL 352
+ N D LE +N ++ L K G+ D A ++F ++ V D TYS M NL
Sbjct: 642 FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 699
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 152/312 (48%), Gaps = 2/312 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + C F +D ++ M + GI D + +NS+I + + S L D M+ +G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ +Y++L+ GK DEA ++ M+ + P T+N ++NG CK ++AL
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR ++ G P+++TYNI+++GL + R A+ + + +SG TY I+
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGL 629
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N L + + + + +I A +K+GR EA D + +G+ D+
Sbjct: 630 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDV 689
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y+ + ++G LE L ME+ G + ++ L + G+I A +L
Sbjct: 690 RTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFM 749
Query: 302 MNKIGFDSNLEA 313
+++ F +LEA
Sbjct: 750 IDEKHF--SLEA 759
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 149/331 (45%), Gaps = 11/331 (3%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG--DLTPCTATFNIMLNG 110
+ DE+L G ++ N + + + +R + G ++TP T+ I++
Sbjct: 41 VFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGS 100
Query: 111 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR-WILKELGDSGHAP 169
C D + K GF + + + L+KGLC R A +L+ + G P
Sbjct: 101 CCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIP 160
Query: 170 NAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGY--TFDGFGYCTVIAAFVKIGRLKEAT 226
N +Y ++K C NR + LE+L M G D Y TVI F K G L +A
Sbjct: 161 NVFSYNILLKGLCDENRSQE-ALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+M+ G+ ++V+Y+++I CK ++ A +L M K G + T+ ++ G
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
C +G K A L+ M+ G + ++ YN ++D L K+G+ A +F+SM + +
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEI 339
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
TY +++ L LL +++G+
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 194/354 (54%), Gaps = 7/354 (1%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HC-LFQLGKPD 83
I P ++++N +I G + L+ + D++++M G+ +V +YN+L+ +C + ++GK
Sbjct: 159 IEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMY 218
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+A+ + ++M + P TFNI+++G CK++ A+++F + + G P +VTYN LI
Sbjct: 219 KADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLI 278
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
GLC G++ A + ++ +S PN IT+ ++ +N+ K E+ M ++G T
Sbjct: 279 NGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGIT 338
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
+ Y +I A+ K +++A M+ GV D+ +YN LI C++G LEAA L
Sbjct: 339 PNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNL 398
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
+ EM+ + + D T+ ILID LC G +K A L+ M + G + YN ++D K
Sbjct: 399 VSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCK 458
Query: 324 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+G + A+N+ ME + + TY+ ++ CK +L A+ LL L+ G+
Sbjct: 459 EGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGL 512
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 161/327 (49%), Gaps = 3/327 (0%)
Query: 2 LIDAYCQFVSFDAGY---TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
LID YC+ Y IL MR GI P+ VT+N LI G ++ +S ++ + EM
Sbjct: 204 LIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMN 263
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G+ P+V +YNSL++ L GK +EA + M+ L P T N +LNG CKN+
Sbjct: 264 RQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVK 323
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A +F + K G P + TYNILI CK + A + + + G P+ TY ++
Sbjct: 324 QAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLI 383
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
R + ++S M K D Y +I + G +K+A +++M G++
Sbjct: 384 AGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLK 443
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
++YNT+I+ YCKEG L AA L +MEK G + T+ +LI G CK ++ A
Sbjct: 444 PSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGL 503
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDG 325
L M + G N Y + + + + G
Sbjct: 504 LNEMLEKGLIPNRMTYEIVTEEMMEKG 530
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 157/299 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID +C+ + A + M G+ P+VVTYNSLI G N ++ + L D+M+
Sbjct: 241 ILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNS 300
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P++ ++N+L++ + +A +F DM +TP T+NI+++ CK+ ++A
Sbjct: 301 CLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDA 360
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++R + G P++ TYN LI GLC+ G L AR ++ E+ + ITY ++
Sbjct: 361 FALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDS 420
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K L +L M RKG Y T+I + K G L+ A + QM G +
Sbjct: 421 LCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLAN 480
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ +YN LI +CK+ KLE A LL+EM ++G ++ T+ I+ + + + G + HL
Sbjct: 481 VATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPDIEGHL 539
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 184/360 (51%), Gaps = 11/360 (3%)
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ V S N LM L ++G+ + V+++MI + P +FNI++NGLCK + A
Sbjct: 123 GLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKA 182
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKA---GRLRTARWILKELGDSGHAPNAITYTTI 177
+ ++ G ++TYN LI G CK G++ A ILKE+ G PN +T+ +
Sbjct: 183 GDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNIL 242
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ +++ +++ + M R+G + Y ++I G++ EAT +QMV +
Sbjct: 243 IDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCL 302
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+ +I+++N L+N +CK ++ A L D+M KQG + T+ ILID CK N++ A
Sbjct: 303 KPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFA 362
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 353
M G ++ YNC++ L + G ++ A N+ M+ K D TY+ ++ +LC
Sbjct: 363 LYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLC 422
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI----RMAKIS 409
+ A +LL + G++ + ++DG G R A ++S++ R+A ++
Sbjct: 423 NKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVA 482
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 107/222 (48%), Gaps = 12/222 (5%)
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
GDS A N+I ++ +N + +LG E G +++ VK+G +
Sbjct: 86 GDSFCA-NSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEI 144
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
+ ++M+ ++ ++S+N +IN CK GKL A ++++M+ +G + T+ L
Sbjct: 145 GDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTL 204
Query: 283 IDGLCKAGNIK---GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
IDG CK G I A L+ M G N +N ++D KD + A+ VF M
Sbjct: 205 IDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNR 264
Query: 340 K----DSFTYSSMVHNLCKAKRLPSAS----KLLLSCLKSGV 373
+ + TY+S+++ LC ++ A+ +++ SCLK +
Sbjct: 265 QGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNI 306
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 178/369 (48%), Gaps = 4/369 (1%)
Query: 8 QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 67
F + D + NR+ P +V + L+ + S L L +M G+PP+V+
Sbjct: 33 HFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVY 92
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+ N L++ L + A V ++ P TF ++ GLC AL +F +
Sbjct: 93 TLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKM 152
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
GF P +VTY LI GLCK G A +L+ + P+ + YT+I+ ++R+
Sbjct: 153 IDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQV 212
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
+ S M +G + D F Y +++ A + K T + QMV + D+V ++T+
Sbjct: 213 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 272
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
++ CKEGK+ A+ ++D M ++G E D T+T L+DG C + A + M + GF
Sbjct: 273 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 332
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASK 363
++ +Y +++ K KID A+ +FE M + D+ TY++++H LC RL A
Sbjct: 333 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIA 392
Query: 364 LLLSCLKSG 372
L + G
Sbjct: 393 LFHEMVARG 401
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 185/400 (46%), Gaps = 9/400 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ + A +L M + PDVV Y S+I ++ ++ + +L +M+ G
Sbjct: 167 LINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQG 226
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+++Y SL+H L L + + M+ + P F+ +++ LCK A
Sbjct: 227 ISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAH 286
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P++VTY L+ G C + A + + G AP+ I+YTT++
Sbjct: 287 EIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGY 346
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + + M RK + D Y T++ +GRL++A +MV G D+
Sbjct: 347 CKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDL 406
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y+ L++ CK LE A LL +E D + I+IDG+C+AG ++ AR
Sbjct: 407 VTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSN 466
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
++ G ++ YN ++ L K G ++ A +F M+ D TY+++ +
Sbjct: 467 LSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNE 526
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVV-----DGLRHSGC 392
A +LL L G S +V DGL S C
Sbjct: 527 TLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGLDQSSC 566
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 194/403 (48%), Gaps = 4/403 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+++C +++L ++ + G PD T+ +LI G + +L L D+M++
Sbjct: 96 ILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDE 155
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V +Y +L++ L ++G A R+ + M G+ P + +++ LCK+R A
Sbjct: 156 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEA 215
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G P++ TY L+ LC + +L ++ +S P+ + ++T++
Sbjct: 216 FNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDA 275
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K EI+ M ++G D Y T++ + EA + MV G D
Sbjct: 276 LCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPD 335
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++SY TLIN YCK K++ A L +EM ++ + D T+ L+ GLC G ++ A
Sbjct: 336 VISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFH 395
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
M G +L Y+ ++D L K+ ++ A+ + +++E D Y+ ++ +C+A
Sbjct: 396 EMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAG 455
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L +A L + G+ ++ GL G EA K+
Sbjct: 456 ELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKL 498
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 202/406 (49%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ + + + ++ +M G+ P+V T N LI + + + +L ++L++G
Sbjct: 62 LLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLG 121
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD ++ +L+ L GK EA +F MI P T+ ++NGLCK T A+
Sbjct: 122 HQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAI 181
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ R +++ P++V Y +I LCK ++ A + ++ G +P+ TYT+++
Sbjct: 182 RLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHAL 241
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++K +L+ M D + TV+ A K G++ EA + ++ M+ GV+ D+
Sbjct: 242 CNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDV 301
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y TL++ +C + +++ A + D M ++GF D ++T LI+G CK I A E
Sbjct: 302 VTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEE 361
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
M + + + + YN ++ L G++ AI +F M ++ D TYS ++ +LCK
Sbjct: 362 MCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCH 421
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L A LL + S + ++DG+ +G A+ + S +
Sbjct: 422 LEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNL 467
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D+ C+ + +L + + ++PD+ YN +I G R L + DL +
Sbjct: 411 ILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSK 470
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P VW+YN ++H L + G +EAN++F +M D +P T+N + G +N T A
Sbjct: 471 GLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRA 530
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAG 150
+++ + GF ++ T +L++ L G
Sbjct: 531 IQLLEEMLARGFSADVSTTTLLVEMLSDDG 560
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 196/407 (48%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + +D + +M+ GI ++ T N L+ R S LS +L L +M+++G
Sbjct: 87 LLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLG 146
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + ++ SL++ + + +A +F M+ P +N +++GLCK++ DNAL
Sbjct: 147 HEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNAL 206
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++K G P++VTYN LI GLC +GR A ++ + P+ T+ ++ C
Sbjct: 207 DLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDAC 266
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + E M R+ D Y +I RL EA + MV+ G D+
Sbjct: 267 VKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDV 326
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y+ LIN YCK K+E L EM ++G + T+TILI G C+AG + A
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G N+ YN ++ L +GKI+ A+ + M+ D TY+ ++ +CKA
Sbjct: 387 MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE 446
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A + S G+ ++ GL G RREA + K++
Sbjct: 447 VADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMK 493
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 148/305 (48%), Gaps = 35/305 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG---------ATR--------- 43
+ID C+ D +LNRM + GI PDVVTYNSLI+G ATR
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Query: 44 --------NSLLSCSL---------DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
N+L+ + + +EM+ + PD+ +Y+ L++ L + DEA
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+F M+ P T++I++NG CK++ ++ +++F + + G V VTY ILI+G
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGY 371
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C+AG+L A I + + G PN ITY ++ N K + L IL+ M++ G D
Sbjct: 372 CRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADI 431
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I K G + +A D + G+ DI +Y T++ K+G A L +
Sbjct: 432 VTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRK 491
Query: 267 MEKQG 271
M++ G
Sbjct: 492 MKEDG 496
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 171/362 (47%), Gaps = 4/362 (1%)
Query: 34 YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
Y ++ R L SLDL M++ P + ++ L+ + ++ K D +++ M
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 94 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 153
+ T NI+LN C+ AL + K G P +VT+ L+ G C+ R+
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 154 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
A ++ ++ G+ PN + Y TI+ ++++ L++L+ M++ G D Y ++I
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ GR +AT + M + D+ ++N LI+ KEG++ A +EM ++ +
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
D T+++LI GLC + A +M G ++ Y+ +++ K K++H + +
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 334 FESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
F M V+++ TY+ ++ C+A +L A ++ + GV ++ GL
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408
Query: 390 SG 391
+G
Sbjct: 409 NG 410
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 95/178 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C + D + M G PDVVTY+ LI G ++ + + L EM +
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + +Y L+ + GK + A +F+ M+ + P T+N++L+GLC N + A
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
L + +QK+G ++VTYNI+I+G+CKAG + A I L G P+ TYTT+M
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 88/170 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ + G + M + G+ + VTY LI G R L+ + ++ M+
Sbjct: 331 ILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFC 390
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P++ +YN L+H L GK ++A + DM + T+NI++ G+CK +A
Sbjct: 391 GVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
++ L G +P++ TY ++ GL K G R A + +++ + G PN
Sbjct: 451 WDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 96/207 (46%), Gaps = 5/207 (2%)
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
R+ Y+ +G Y ++ ++ +L ++ D MV I ++ L++ K K +
Sbjct: 40 RRAYS-NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYD 98
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
L ++M+ G + T IL++ C+ + A L M K+G + ++ + ++
Sbjct: 99 VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLL 158
Query: 319 DRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
+ + ++ A+ +F+ M + Y++++ LCK+K++ +A LL K G+
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG 218
Query: 375 ILKSAQKAVVDGLRHSGCRREAKKIQS 401
+++ GL SG +A ++ S
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVS 245
>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 215/415 (51%), Gaps = 10/415 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C+ FDA ++ RM+ G SPDVVTYN LI L +L ++D++LE
Sbjct: 152 VISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLEDN 211
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y L+ G D+A R+ +M+ L P T+N+++ G+CK D A
Sbjct: 212 CNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAF 271
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
L P L YN+L+KGL GR ++ ++ G PN +TY+ ++
Sbjct: 272 EFVSNLNT---TPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSL 328
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ K +++L MK KG D + Y +I+AF K G++ A +++ M++ G DI
Sbjct: 329 CRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDI 388
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHLE 300
V+YNT++ CK+G+ + A + ++E+ G + ++ + L +G+ I+ + LE
Sbjct: 389 VNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALTMILE 448
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAK 356
++ G D + YN ++ L +DG +D AI + ME + +Y+ ++ LCKA
Sbjct: 449 MLSN-GVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAH 507
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI-QSKIRMAKISH 410
R+ A ++L + +G + ++ +V+G+ ++G R A ++ +S + M IS
Sbjct: 508 RIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYAVELAKSLVSMNAISQ 562
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 171/369 (46%), Gaps = 32/369 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + C D +++++ E +P V+TY LI + + ++ LLDEM+
Sbjct: 186 ILIGSLCARGKLDLALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSR 245
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEA--------------------------------NRV 88
G+ PD+++YN ++ + + G D A R+
Sbjct: 246 GLQPDMYTYNVIVRGMCKRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERL 305
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
DMI P T++++++ LC++ A+ + R +++ G P+ Y+ LI CK
Sbjct: 306 MSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCK 365
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
G++ A + ++ +G P+ + Y TIM + + L I ++ G +
Sbjct: 366 EGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASS 425
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y T+ A G A + +M+++GV D ++YN+LI+ C++G ++ A LL +ME
Sbjct: 426 YNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDME 485
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
+ ++ ++ I++ GLCKA I A L M G N Y +V+ +G G
Sbjct: 486 RTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRS 545
Query: 329 HAINVFESM 337
+A+ + +S+
Sbjct: 546 YAVELAKSL 554
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 11/202 (5%)
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+++ Y F + + K G+ EA ++EQMV G + D++ LI +
Sbjct: 69 QQQHYDFRDTHHMKALNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRT 128
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
E A +++ +E+ G + D + + +I G C++ A + M GF ++ YN +
Sbjct: 129 EKAVRVMEILEQYG-DPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNIL 187
Query: 318 VDRLGKDGKIDHAINVFESMEVKDS-----FTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
+ L GK+D A+ V + + ++D+ TY+ ++ + A +LL + G
Sbjct: 188 IGSLCARGKLDLALKVMDQL-LEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRG 246
Query: 373 VRILKSAQKAVVDGLRHSGCRR 394
++ +V G+ C+R
Sbjct: 247 LQPDMYTYNVIVRGM----CKR 264
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 188/391 (48%), Gaps = 6/391 (1%)
Query: 25 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM--LEMGIPPDVWSYNSLMHCLFQLGKP 82
AG PD +N ++ L +L ++ M E PPD +SYN ++ L++ GK
Sbjct: 151 AGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKG 210
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
+A +VF +M+ + P T+N M++G K + R+ + G P +VTYN+L
Sbjct: 211 SDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVL 270
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
+ GLC+AGR+ R ++ E+ P+ TY+ + R + + L + + +KG
Sbjct: 271 LSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGV 330
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
+ ++ K G++ +A +E +V G+ V YNTLIN YC+ L A+
Sbjct: 331 MLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFC 390
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
+ ++M+ + D T+ LI+GLCK + A + M K G D ++E +N ++D G
Sbjct: 391 IFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYG 450
Query: 323 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
G+++ V M+ K D ++ S+V CK ++P A +L + V
Sbjct: 451 TAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ 510
Query: 379 AQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+++D SG +A + K++ + +S
Sbjct: 511 VYNSIIDAYIESGDTEQAFLLVEKMKNSGVS 541
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 204/445 (45%), Gaps = 41/445 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID + + +AG+ + ++M G P++VTYN L++G R + + L+DEM
Sbjct: 235 MIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHS 294
Query: 62 IPPDVWSYNSL------------MHCLF-----------------------QLGKPDEAN 86
+ PD ++Y+ L M LF + GK +A
Sbjct: 295 MFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAE 354
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+V + ++ L P T +N ++NG C+ R A +F ++ P+ +TYN LI GL
Sbjct: 355 QVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGL 414
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK + A ++ E+ SG P+ T+ T++ + + +LS M++KG D
Sbjct: 415 CKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDV 474
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ +V+ AF K G++ EA ++ M+ V + YN++I+ Y + G E A+LL+++
Sbjct: 475 ISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEK 534
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+ G T+ +L+ GLC++ I A + + G ++ +YN I+ G
Sbjct: 535 MKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGD 594
Query: 327 IDHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
D A+ + + M ++ + TY ++V L A R+ L L V S
Sbjct: 595 TDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGI 654
Query: 383 VVDGLRHSGCRREAKKIQSKIRMAK 407
+VD + C ++K K M++
Sbjct: 655 MVDA--YVRCENDSKVASLKKEMSE 677
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 177/361 (49%), Gaps = 4/361 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + M + G+ P+ +TYN++I G + L L D+ML G P++ +YN L+ L
Sbjct: 216 VFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLC 275
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G+ DE + +M + P T++I+ +GL + + L +F K G +
Sbjct: 276 RAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAY 335
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T +IL+ GLCK G++ A +L+ L +G P + Y T++ + R + I M
Sbjct: 336 TCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM 395
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K + D Y +I K+ + +A D + +M GV + ++NTLI+ Y G+L
Sbjct: 396 KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQL 455
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
E + +L +M+++G + D + ++ CK G I A L+ M N + YN I
Sbjct: 456 EKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSI 515
Query: 318 VDRLGKDGKIDHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+D + G + A + E M+ V S TY+ ++ LC++ ++ A +L+ + G+
Sbjct: 516 IDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGL 575
Query: 374 R 374
R
Sbjct: 576 R 576
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 165/383 (43%), Gaps = 35/383 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C+ D +++ M + PD TY+ L G TR L L E L+
Sbjct: 269 VLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKK 328
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA------------------ 102
G+ ++ + L++ L + GK +A +V + ++ L P T
Sbjct: 329 GVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGA 388
Query: 103 -----------------TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
T+N ++NGLCK A + ++K G P + T+N LI
Sbjct: 389 FCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDA 448
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
AG+L +L ++ G + I++ +++K +N K + IL M K +
Sbjct: 449 YGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPN 508
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y ++I A+++ G ++A +E+M GV IV+YN L+ C+ +++ A L+
Sbjct: 509 AQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIY 568
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+ QG D ++ +I C G+ A L+ MNK G L Y+ +V L G
Sbjct: 569 TLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAG 628
Query: 326 KIDHAINVFESMEVKDSFTYSSM 348
++ +++ M K+ SS+
Sbjct: 629 RVHDMECLYQQMLHKNVEPSSSI 651
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 147/330 (44%), Gaps = 3/330 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ C+ +L + G+ P V YN+LI G + L + + ++M
Sbjct: 339 ILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR 398
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PD +YN+L++ L +L +A + +M + P TFN +++ +
Sbjct: 399 HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC 458
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +Q+ G +++++ ++K CK G++ A IL ++ APNA Y +I+
Sbjct: 459 FTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDA 518
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + ++ MK G + Y ++ + ++ EA + + + G++ D
Sbjct: 519 YIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPD 578
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+VSYNT+I+ C +G + A LL EM K G T+ L+ L AG + +
Sbjct: 579 VVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQ 638
Query: 301 YMNKIGFDSNLEAYNCIVD---RLGKDGKI 327
M + + Y +VD R D K+
Sbjct: 639 QMLHKNVEPSSSIYGIMVDAYVRCENDSKV 668
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 124/247 (50%), Gaps = 6/247 (2%)
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+P L + N+L++ L GR R L +G P+ + +++ C + L
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178
Query: 193 ILSAMKRK--GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
++ M R D F Y VIA + G+ +A ++MV GV + ++YNT+I+
Sbjct: 179 MVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDG 238
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+ K G LEA + L D+M G + + T+ +L+ GLC+AG + R+ ++ M +
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD 298
Query: 311 LEAYNCIVDRLGKDGKIDHAINVF-ESME---VKDSFTYSSMVHNLCKAKRLPSASKLLL 366
Y+ + D L + G+ +++F ES++ + ++T S +++ LCK ++ A ++L
Sbjct: 299 GFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLE 358
Query: 367 SCLKSGV 373
+ +G+
Sbjct: 359 MLVHTGL 365
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 103/239 (43%), Gaps = 35/239 (14%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LIDAY + +T+L+ M++ GI DV+++ S++ +N + ++ +LD+M+
Sbjct: 445 LIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKD 504
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY----- 116
+ P+ YNS++ + G ++A + + M ++ T+N++L GLC++
Sbjct: 505 VAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAE 564
Query: 117 ------------------------------TDNALRMFRGLQKHGFVPELVTYNILIKGL 146
TD AL + + + K+G P L TY+ L+ L
Sbjct: 565 ELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSAL 624
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
AGR+ + +++ P++ Y ++ R + M KG FD
Sbjct: 625 ASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 208/437 (47%), Gaps = 39/437 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ + + D Y + M + GI P+VVTY+S+IA + + ++++L M++ G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +YNS++H G+P EA + M + P T+N +++ LCKN A
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+MF + K G PE+ TY L++G G L +L + +G PN ++ ++
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD------ 235
+ K + + S M+++G D Y TVI K GR+++A Y EQM+ +
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444
Query: 236 -----------------------------GVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
G+ LD + +N++I+ +CKEG++ + L D
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M + G + D T++ LIDG C AG + A L M +G + YN +++ K +
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
++ A+ +F ME D TY+ ++ L + +R +A +L + +SG ++ S
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624
Query: 383 VVDGLRHSGCRREAKKI 399
++ GL + EA ++
Sbjct: 625 ILHGLCKNNLTDEALRM 641
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 196/393 (49%), Gaps = 6/393 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYN 70
DA +L RM + G P+V +YN L+ G ++ +L+LL M + G PPDV SY
Sbjct: 144 DAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYT 203
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
++++ F+ G D+A + +M+ + P T++ ++ LCK + D A+ + + K+
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN 263
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G +P TYN ++ G C +G+ + A LK++ G P+ +TY ++M +N +
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
++ +M ++G + Y T++ + G L E ++ MV +G+ + ++ LI
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
Y K+GK++ A L+ +M +QG D T+ +I LCK+G ++ A + E M
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG 443
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
YN ++ L K D A + M + D+ ++S++ + CK R+ + KL
Sbjct: 444 NIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFD 503
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
++ GV+ ++DG +G EA K+
Sbjct: 504 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKL 536
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 189/402 (47%), Gaps = 4/402 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ YC L +M G+ PDVVTYNSL+ +N + + + D M + G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++ +Y +L+ G E + + M+ + P F+I++ K D A+
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++ G P+ VTY +I LCK+GR+ A +++ D +P I Y +++
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K+ E++ M +G D + ++I + K GR+ E+ + MV GV+ DI
Sbjct: 455 CIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 514
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y+TLI+ YC GK++ A LL M G + D T+ LI+G CK ++ A +
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHNLCKAKR 357
M G ++ YN I+ L + + A + + ES + TY+ ++H LCK
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
A ++ + + +++ ++ L G EAK +
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 169/358 (47%), Gaps = 43/358 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI AY + D + ++MR+ G++PD VTY ++I ++ + ++ ++M++
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P YNSL+H L K D+A + +M+ + T FN +++ CK +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F + + G P+++TY+ LI G C AG++ A +L + G P+ +TY T++
Sbjct: 499 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN- 557
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
GYC KI R+++A +M + GV D
Sbjct: 558 ---------------------------GYC-------KISRMEDALVLFREMESSGVSPD 583
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++YN ++ + + AA L + + G + + T+ I++ GLCK N+ L +
Sbjct: 584 IITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK-NNLTDEALRM- 641
Query: 301 YMNKIGFDSNLE--AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNL 352
+ N D LE +N ++ L K G+ D A ++F ++ V D TYS M NL
Sbjct: 642 FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 699
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 152/312 (48%), Gaps = 2/312 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + C F +D ++ M + GI D + +NS+I + + S L D M+ +G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ +Y++L+ GK DEA ++ M+ + P T+N ++NG CK ++AL
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR ++ G P+++TYNI+++GL + R A+ + + +SG TY I+
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGL 629
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N L + + + + +I A +K+GR EA D + +G+ D+
Sbjct: 630 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDV 689
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y+ + ++G LE L ME+ G + ++ L + G+I A +L
Sbjct: 690 RTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFM 749
Query: 302 MNKIGFDSNLEA 313
+++ F +LEA
Sbjct: 750 IDEKHF--SLEA 759
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 149/330 (45%), Gaps = 9/330 (2%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG--DLTPCTATFNIMLNG 110
+ DE+L G ++ N + + + +R + G ++TP T+ I++
Sbjct: 41 VFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILMGS 100
Query: 111 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR-WILKELGDSGHAP 169
C D + K GF+ + + + ++KGLC R A +L+ + G P
Sbjct: 101 CCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIP 160
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY--TFDGFGYCTVIAAFVKIGRLKEATD 227
N +Y ++K + + + LE+L M G D Y TVI F K G L +A
Sbjct: 161 NVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
+M+ G+ ++V+Y+++I CK ++ A +L M K G + T+ ++ G C
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 343
+G K A L+ M+ G + ++ YN ++D L K+G+ A +F+SM + +
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
TY +++ L LL +++G+
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGI 370
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 198/447 (44%), Gaps = 75/447 (16%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++A+C+ +L RM++ G++P TYN+L++ R + + +++ M G
Sbjct: 245 LLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANG 304
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFN--------------- 105
PD+W+YN L L Q GK DEA R+ +M G L P T+N
Sbjct: 305 FEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDA 364
Query: 106 --------------------IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
I++ GLCK+ + AL + G P+++TYN LI
Sbjct: 365 LRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHA 424
Query: 146 LCKAG-----------------------------------RLRTARWILKELGDSGHAPN 170
CKAG R A+ +L+ G P+
Sbjct: 425 HCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPD 484
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
++Y T+M F+ + L + M K T Y T+I ++GRLKEA D +
Sbjct: 485 EVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLN 544
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+++ G+ D +YN +I+ YCKEG LE A+ ++M + F+ D T L++GLC G
Sbjct: 545 ELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNG 604
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 346
+ A E + G ++ YN ++ + KDG +D A++ F ME + D+FTY+
Sbjct: 605 KLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYN 664
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGV 373
++ L +A R A +L +SG
Sbjct: 665 VVLSALSEAGRTEEAQNMLHKLAESGT 691
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 192/393 (48%), Gaps = 8/393 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I C+ + LN+M + G++PDV+TYN+LI + ++ + L+DEM+
Sbjct: 385 IVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRR 444
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ D ++ N++++ L + + +EA + Q P ++ ++ K ++ A
Sbjct: 445 GLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPA 504
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
LR++ + + P + TYN LIKGL + GRL+ A L EL + G P+ TY I+
Sbjct: 505 LRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHA 564
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + + M + D T++ G+L +A E V G ++D
Sbjct: 565 YCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVD 624
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++YNTLI CK+G ++ A +ME +G + D +T+ +++ L +AG + A+ L
Sbjct: 625 VITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLH 684
Query: 301 YMNKIG-----FDSNLEAYNCIVD-RLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCK 354
+ + G F S L + + + GKD K + E+ + S Y+ +V+ LC
Sbjct: 685 KLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEE--ETVENPQDSASEAYTKLVNGLCT 742
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ + A +L ++ G+ + S +++GL
Sbjct: 743 SGQFKEAKAILDEMMQKGMSVDSSTYITLMEGL 775
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 176/352 (50%), Gaps = 5/352 (1%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
+ P+ T+N L+ L+ +L L M G+ PD +YN+L++ + G EA
Sbjct: 200 LHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 259
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ M + P T+N +++ + + A ++ + +GF P+L TYN+L GL
Sbjct: 260 ALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGL 319
Query: 147 CKAGRLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
C+AG++ A + E+ G P+ +TY T+ CF+ R L +L M+ KG
Sbjct: 320 CQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKAT 379
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ VI K G L+ A + +M DG+ D+++YNTLI+ +CK G + AY L+D
Sbjct: 380 LVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMD 439
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM ++G + D +T ++ LCK + A+ L+ + GF + +Y ++ K+
Sbjct: 440 EMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEY 499
Query: 326 KIDHAINVFESM---EVKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ A+ +++ M ++ S TY++++ L + RL A L ++ G+
Sbjct: 500 NSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGL 551
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 185/386 (47%), Gaps = 4/386 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L MRE G+ +VT+N +I G ++ L +L L++M + G+ PDV +YN+L+H
Sbjct: 367 LLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHC 426
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G +A + +M+ L T T N +L LCK + + A + + + GF+P+ V
Sbjct: 427 KAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEV 486
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
+Y ++ K A + E+ + P+ TY T++K R + K ++ L+ +
Sbjct: 487 SYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNEL 546
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
KG D Y +I A+ K G L+ A + +MV + + D+V+ NTL+N C GKL
Sbjct: 547 MEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKL 606
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A L + ++G + D T+ LI +CK G++ A M G + YN +
Sbjct: 607 DKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVV 666
Query: 318 VDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ L + G+ + A N+ ES + SF+ + + +K +++
Sbjct: 667 LSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQ 726
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKI 399
A +V+GL SG +EAK I
Sbjct: 727 DSASEAYTKLVNGLCTSGQFKEAKAI 752
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 153/316 (48%), Gaps = 7/316 (2%)
Query: 64 PDVWSYNSLMHCLFQLGK--PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + + N+++ L + P + F+ ++ L P TFN++++ C +AL
Sbjct: 165 PSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADAL 224
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+Q G P+ VTYN L+ C+ G L AR +L + G AP TY T++
Sbjct: 225 STLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAY 284
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL-D 240
R K +++ AM G+ D + Y + A + G++ EA ++M G L D
Sbjct: 285 ARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPD 344
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YNTL + K A LL+EM ++G + TH I+I GLCK G ++GA L
Sbjct: 345 VVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLN 404
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G ++ YN ++ K G I A + + M + D+FT +++++NLCK K
Sbjct: 405 KMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEK 464
Query: 357 RLPSASKLLLSCLKSG 372
R A LL S + G
Sbjct: 465 RYEEAQGLLQSPPQRG 480
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 183/369 (49%), Gaps = 5/369 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE-M 60
LI+A+C+ L RMREAG++PD TYN L+ G R LL+ + L +M
Sbjct: 96 LINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRW 155
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D +SY L+ L G+ D+A RVF M G P T+ ++L+GLCK R A
Sbjct: 156 GACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEA 215
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G VP +VTYN LI GLC+ GR +L+++ H+P+ TYT ++
Sbjct: 216 EALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHG 275
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K G ++L KG + Y +I + K G +K A D ++ M + V
Sbjct: 276 LCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPG 335
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ ++N +I+ +C GK+ A L +M G + T LI G C G K A L+
Sbjct: 336 VQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLD 395
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + G + + Y +D L +G+++ A ++F + +K + Y+S+VH C+
Sbjct: 396 LMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVG 455
Query: 357 RLPSASKLL 365
+ SA L+
Sbjct: 456 DIDSAFGLM 464
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 166/378 (43%), Gaps = 39/378 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C D + +M P V TY L+ G + + + LL EM+
Sbjct: 166 ILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNK 225
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V +YN+L+ L Q G+ D+ ++ + M +P T+ +++GLCK+ +
Sbjct: 226 GVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHG 285
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ G E++TYN LI G CK G ++ A
Sbjct: 286 AKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAA------------------------- 320
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
L++L MKR + VI F G++ +A ++ QM G+ +
Sbjct: 321 ----------LDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPN 370
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V++N+LI+ C G+ + A LLD ME+ G D+ T+ I ID LC G ++ A
Sbjct: 371 TVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFS 430
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ G ++ Y +V + G ID A + E M + D TY++++ LCK K
Sbjct: 431 CLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVK 490
Query: 357 RLPSASKLLLSCLKSGVR 374
RL A LL K G+
Sbjct: 491 RLDRAIDLLDKMKKQGIE 508
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 159/371 (42%), Gaps = 27/371 (7%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C L +M AG+SP+ VT+NSLI+G +L LLD M E G
Sbjct: 342 VIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYG 401
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y + L G+ +EA+ +F + + + +++G C+ D+A
Sbjct: 402 VLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAF 461
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +P++ TYN LI GLCK RL A +L ++ G P T+ ++K
Sbjct: 462 GLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQM 521
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME--QMVTDGVQL 239
++K+ ++ M G D Y I+ G KE M +M GV
Sbjct: 522 LWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFP 581
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+ +YN +I Y G E A+ +M + D T++IL++ +C +
Sbjct: 582 DVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSD------ 635
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKA 355
FD+ +++ K + + +FE M D+ TY +++ LC
Sbjct: 636 ------AFDN---------EKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQ 680
Query: 356 KRLPSASKLLL 366
RL LLL
Sbjct: 681 CRLEEVEWLLL 691
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 163/348 (46%), Gaps = 13/348 (3%)
Query: 63 PPDVWSYNSLMHCLFQLGK--PDEANRV--FQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
P DV S+N+ + G P A+ + F M+ P T+N ++N CK
Sbjct: 48 PSDVRSHNAALIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLA 107
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS-GHAPNAITYTTI 177
+A +++ G P+ TYN L+ GLC+AG L A + ++ G + +YT +
Sbjct: 108 DARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTIL 167
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGF-GYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
+K + + + M R G+ G Y ++ K+ R+ EA + +MV G
Sbjct: 168 IKGLCAAGRIDDACRVFAKMSR-GWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKG 226
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGA 295
V ++V+YN LI C+EG+ + LL++ME Q D +T+T ++ GLCK G + GA
Sbjct: 227 VVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGA 286
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSF-TYSSMVHN 351
++ E + K G + YN +++ K G + A++V + M+ V T++ ++H
Sbjct: 287 KVLHEAIGK-GVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHG 345
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
C ++ A L +G+ +++ G G R+ A ++
Sbjct: 346 FCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRL 393
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 157/371 (42%), Gaps = 26/371 (7%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ YCQ D+ + ++ +M PDV TYN+LI G + L ++DLLD+M + G
Sbjct: 447 LVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQG 506
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN-----GLCKNRY 116
I P ++N L+ + K +A ++++ MI P T+ + ++ G K
Sbjct: 507 IEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEEN 566
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
D A+ + + G P++ TYN +IK AG A + ++ P+ TY+
Sbjct: 567 IDMAVV---EMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSI 623
Query: 177 IMK--C------CFRNRK-YKLG-----LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
++ C F N K +K+ E+ M Y ++ RL
Sbjct: 624 LLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRL 683
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
+E + +M + + LD + L+ YC A M Q F+ + +L
Sbjct: 684 EEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLL 743
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 340
+ GLC +G+ A M +G++ + + ++D L + G + + M+ K
Sbjct: 744 LSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKC 803
Query: 341 --DSFTYSSMV 349
+ TY+S+V
Sbjct: 804 VASTRTYASLV 814
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 150/378 (39%), Gaps = 37/378 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ IDA C + +++ + + GI V Y SL+ G + + + L+++M
Sbjct: 411 IFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASE 470
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV +YN+L+ L ++ + D A + M + P T TFNI++ + ++ +A
Sbjct: 471 NCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADA 530
Query: 121 LRMFRGLQKHGFVPELVTYNILI-----KGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
+M+ + G P+ TY + I +G K + A + E+ ++G P+ TY
Sbjct: 531 AKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMA---VVEMHEAGVFPDVETYN 587
Query: 176 TIMK----CCFRNRKYKLGLEILSAM-----------------KRKGYTFDGFGYCTVIA 214
I+K + + + +++LS K FD I
Sbjct: 588 AIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDN----EKIW 643
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
V + L+E EQM I +Y L+ C + +LE LL +M+
Sbjct: 644 KMVDVRNLQE---LFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILL 700
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
D+ L+ C + A M F L++ ++ L G A+++F
Sbjct: 701 DEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIF 760
Query: 335 ESMEVKDSFTYSSMVHNL 352
M + + Y +V L
Sbjct: 761 SDM-LGLGYNYDEVVWKL 777
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 84/183 (45%), Gaps = 5/183 (2%)
Query: 232 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
M+ G + +YNTLIN +CK L A L M + G D +T+ L+ GLC+AG
Sbjct: 81 MLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGL 140
Query: 292 IKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 346
+ A L ++ + G + +Y ++ L G+ID A VF M TY+
Sbjct: 141 LAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYT 200
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
++ LCK +R+ A LL + GV A++ GL G + K+ K+ +
Sbjct: 201 VLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQ 260
Query: 407 KIS 409
+ S
Sbjct: 261 RHS 263
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 185/356 (51%), Gaps = 7/356 (1%)
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
M G PP+ ++N+L++ + G+P + R+ + M D+ P ++N +L GLCK
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 117 TDNALRMFRGLQKHG--FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
A + R + G P++VTY+ L+ G CKAG++ +R +LKE+ G P+A+ Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
T ++ ++ + LE+L M R G + T+I+ + L+ A +++M
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
GV+ D+V+YNTL++ CK G+L+ A LL+ M+ G D ++ + GLCK+G +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-----FTYSSMV 349
A LE M D N+ YN I+D L K GKID A+ + E M D YS++V
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
LCK R A ++ + ++G R ++V+GL +G EA + ++ M
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAM 356
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 209/415 (50%), Gaps = 12/415 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRM--REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
L++ C+ + ++ M R +PD+VTY++L++G + + S +LL E++
Sbjct: 51 LLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVIS 110
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G+ PD Y ++ L + + EA + ++MI P TFN +++G C+ + +
Sbjct: 111 RGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEM 170
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + + + G ++VTYN L+ GLCKAGRL+ A +L+ + SG AP+ + Y++ +
Sbjct: 171 ADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVY 230
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV-TDGVQ 238
++ K ++L M+ + + Y T++ K G++ A + MEQM +DG
Sbjct: 231 GLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCG 290
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
L++V Y+T+++ CK G+ + A +++ M + G D T++ L++GLCKAG I+ A
Sbjct: 291 LNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEA 350
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF---------TYSSMV 349
+ M G N Y +V L G++ A + E M TY++++
Sbjct: 351 VREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALI 410
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
LCKA R+ A K G + +V+GL SG +A+ I S++R
Sbjct: 411 GGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 196/385 (50%), Gaps = 7/385 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M G P+ VT+N+L+ G ++ LL+ M I P+V SYN L+ L +L +
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 82 PDEANRVFQDMIC--GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
EA + +DMI G TP T++ +L+G CK + + + + + G P+ + Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
++ LCK+ RL A +L+E+ +G P IT+ T++ C R + ++ +L M
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
G D Y T++ K GRL+EA +E+M G D+V+Y++ + CK GK+
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM-NKIGFDSNLEAYNCIV 318
A+ +L++M + + T+ ++DGLCK+G I A +E M + G N+ Y+ +V
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300
Query: 319 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
D L K G+ A +V E+M D TYSS+V+ LCKA ++ A + + G +
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360
Query: 375 ILKSAQKAVVDGLRHSGCRREAKKI 399
++V GL G EA+++
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERM 385
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 184/355 (51%), Gaps = 7/355 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHC 75
+L M I P+VV+YN L+ G + + +L+ +M+ G PD+ +Y++L+
Sbjct: 32 LLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSG 91
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
+ GK +E+ + +++I L P + ++ LCK+ AL + + + G P
Sbjct: 92 YCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPT 151
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
L+T+N LI G C+ L A +L+++ SG + +TY T+M + + + ++L
Sbjct: 152 LITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLE 211
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
MK G D Y + + K G++ +A +EQM ++V+YNT+++ CK G
Sbjct: 212 RMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSG 271
Query: 256 KLEAAYLLLDEM-EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
K++ A ++++M G + ++ ++DGLCK G + AR +E M + G ++ Y
Sbjct: 272 KIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTY 331
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
+ +V+ L K GKI+ A+ M ++ ++ TY S+VH LC RL A +++
Sbjct: 332 SSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMV 386
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 189/406 (46%), Gaps = 3/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C + +L +M + PD T+N LI + + + +L M + G
Sbjct: 236 LIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRG 295
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ +YN+LM EA +F M+ L P +N++++G CK + D A+
Sbjct: 296 EKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAM 355
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ L VP + +YN LI GLC +GR+ + +L E+ S P+ +TY ++
Sbjct: 356 VLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDAL 415
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + L +L M +KG + Y ++ + + A D +MV G++ DI
Sbjct: 416 CKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDI 475
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN LIN YCK ++ A +L EM + D ++ LIDGLC G I + L+
Sbjct: 476 LNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDE 535
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYSSMVHNLCKAKRL 358
M G ++ YN ++D K D AI++F + D +T ++V NLCK ++L
Sbjct: 536 MCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKL 595
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
A L L G +++ L G EA + SK+
Sbjct: 596 KMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKME 641
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 187/403 (46%), Gaps = 40/403 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDA C+ +L M + G PD+VTYN+L+ G + + +L + M++
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV +YN L+ + DEA +F+++ +L P A++N +++GLC + +
Sbjct: 330 GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + P++VTYNILI LCK GR+ A +L + G PN +TY +M
Sbjct: 390 KKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449
Query: 181 -CFRN----------RKYKLGLE------------------------ILSAMKRKGYTFD 205
C RN R K GLE + M+ K D
Sbjct: 450 YCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPD 509
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y ++I +GR+ + +++M G D+++YN L++ +CK + A L
Sbjct: 510 IASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFR 569
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
++ +G D YT+ ++D LCK +K A L+++ G N++ Y +++ L KDG
Sbjct: 570 QI-VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDG 628
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 364
A+ + ME D+ T+ ++ L + A KL
Sbjct: 629 SFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKL 671
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 189/442 (42%), Gaps = 45/442 (10%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
C+F + D T NRM P ++ L+ R ++ L ++ GI P +
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC-------------- 112
++ L++C F A + ++ P TFN ++NG C
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 113 ---------------------KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
KN AL + + ++K P LV Y+ LI GLCK G
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
+ A + ++G+ G +A+TY +++ C +++ ++L+ M R+ D + +
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+I A K GR+ EA + M G + DIV+YN L+ YC + A L + M K+G
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
E D + +LIDG CK + A + + + + +YN ++D L G+I H
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK 390
Query: 332 NVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ + M + D TY+ ++ LCK R+ A +L+ +K GV+ A++DG
Sbjct: 391 KLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGY 450
Query: 388 RHSGCRREAKKIQSKI--RMAK 407
C R + I RM K
Sbjct: 451 ----CLRNNVNVAKDIFNRMVK 468
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 187/378 (49%), Gaps = 4/378 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ Y +++L + ++G P++VT+N++I G N ++ +LD +L
Sbjct: 95 ILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQ 154
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D ++Y +L++ L + G+ A + Q+M + P ++ +++GLCK+ + +A
Sbjct: 155 GYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDA 214
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + + G + + VTYN LI G C GR + +L ++ P+ T+ ++
Sbjct: 215 LGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDA 274
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + +L+ M ++G D Y ++ + + EA + +MV G++ D
Sbjct: 275 LCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPD 334
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++YN LI+ YCK ++ A +L E+ + ++ LIDGLC +G I + L+
Sbjct: 335 VLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLD 394
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M+ ++ YN ++D L K+G+I A+ V M K + TY++M+ C
Sbjct: 395 EMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRN 454
Query: 357 RLPSASKLLLSCLKSGVR 374
+ A + +KSG+
Sbjct: 455 NVNVAKDIFNRMVKSGLE 472
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 118/236 (50%), Gaps = 1/236 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D YC + + I NRM ++G+ PD++ YN LI G + ++ ++ L EM
Sbjct: 446 MMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN 505
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ SYNSL+ L LG+ + +M +P T+NI+L+ CK + D A+
Sbjct: 506 LIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAI 565
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + + G P+ T + ++ LCK +L+ A LK L G +PN TYT ++
Sbjct: 566 SLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINAL 624
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
++ + + +LS M+ D + +I ++ +A E+M+ G+
Sbjct: 625 CKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 1/133 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+DA+C+ FD ++ ++ E GI PD T ++++ + L + D L +L
Sbjct: 550 ILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMH 608
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V +Y L++ L + G EA + M D P TF I++ L + TD A
Sbjct: 609 GCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKA 668
Query: 121 LRMFRGLQKHGFV 133
++ + G V
Sbjct: 669 EKLREEMIARGLV 681
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 201/410 (49%), Gaps = 6/410 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ + + D Y+ + M + GI PDVVTYNS+IA + + ++++L+ M++ G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +YNS++H G+P EA + M + P T++++++ LCKN A
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + K G PE+ TY L++G G L +L + +G P+ ++ ++
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + + S M+++G + Y VI K GR+++A Y EQM+ +G+
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ YN+LI+ C K E A L+ EM +G + +ID CK G + + E
Sbjct: 442 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFEL 501
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M +IG N+ YN +++ GK+D A+ + M ++ TYS++++ CK R
Sbjct: 502 MVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR 561
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
+ A L SGV ++ GL + RR A + +R+ +
Sbjct: 562 MEDALVLFKEMESSGVSPDIITYNIILQGLFQT--RRTAAAKELYVRITE 609
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 200/396 (50%), Gaps = 7/396 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE---MGIPPDVWSY 69
DA +L RM E G P+V +YN L+ G + +L+LL M + G PPDV SY
Sbjct: 140 DAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
++++ F+ G D+A + +M+ + P T+N ++ LCK + D A+ + + K
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVK 259
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
+G +P+ +TYN ++ G C +G+ + A LK++ G P+ +TY+ +M +N +
Sbjct: 260 NGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCME 319
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+I +M ++G + Y T++ + G L E ++ MV +G+ D ++ LI
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
Y K+GK++ A L+ +M +QG + T+ +I LCK+G ++ A L+ E M G
Sbjct: 380 AYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
YN ++ L K + A + M + ++ ++S++ + CK R+ + KL
Sbjct: 440 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 499
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
++ GV+ +++G +G EA K+ S
Sbjct: 500 ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLS 535
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 203/437 (46%), Gaps = 39/437 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I A C+ + D +LN M + G+ PD +TYNS++ G + ++ L +M G
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML------------- 108
+ PDV +Y+ LM L + G+ EA ++F M L P T+ +L
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 356
Query: 109 --------NGLCKNRYT--------------DNALRMFRGLQKHGFVPELVTYNILIKGL 146
NG+ + Y D A+ +F +++ G P VTY +I L
Sbjct: 357 GLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL 416
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK+GR+ A +++ D G +P I Y +++ K++ E++ M +G +
Sbjct: 417 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 476
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ ++I + K GR+ E+ E MV GV+ ++++YNTLIN YC GK++ A LL
Sbjct: 477 IFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSG 536
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M G + + T++ LI+G CK ++ A + + M G ++ YN I+ L + +
Sbjct: 537 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 596
Query: 327 IDHA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
A + + ES + TY+ ++H LCK K A ++ + +++
Sbjct: 597 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 656
Query: 383 VVDGLRHSGCRREAKKI 399
++D L G EAK +
Sbjct: 657 MIDALLKVGRNDEAKDL 673
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 189/435 (43%), Gaps = 51/435 (11%)
Query: 14 AGYTILNRMREAG---ISPDVVTYNSLIAGATRNSLL----------------------- 47
A + NRM AG ++PD+ TY LI R L
Sbjct: 67 AAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFT 126
Query: 48 ------------SCSLDL-LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI- 93
S ++D+ L M E+G P+V+SYN L+ L + EA + M
Sbjct: 127 PLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMAD 186
Query: 94 --CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
G P ++ ++NG K +D A + + G +P++VTYN +I LCKA
Sbjct: 187 DRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQA 246
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
+ A +L + +G P+ +TY +I+ + + K + L M+ G D Y
Sbjct: 247 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSL 306
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
++ K GR EA + M G++ +I +Y TL+ Y +G L + LLD M + G
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
D Y +ILI K G + A L M + G + N Y ++ L K G+++ A+
Sbjct: 367 IHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426
Query: 332 NVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
FE M + Y+S++H LC + A +L+L L G+ + +++D
Sbjct: 427 LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIID-- 484
Query: 388 RHSGCRREAKKIQSK 402
S C +E + I+S+
Sbjct: 485 --SHC-KEGRVIESE 496
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 182/397 (45%), Gaps = 43/397 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI AY + D + ++MR+ G++P+ VTY ++I ++ + ++ ++M++
Sbjct: 376 ILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 435
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P YNSL+H L K + A + +M+ + T FN +++ CK +
Sbjct: 436 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES 495
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F + + G P ++TYN LI G C AG++ A +L + G PN +TY+T++
Sbjct: 496 EKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLIN- 554
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
GYC KI R+++A ++M + GV D
Sbjct: 555 ---------------------------GYC-------KISRMEDALVLFKEMESSGVSPD 580
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++YN ++ + + AA L + + G + + T+ I++ GLCK + L +
Sbjct: 581 IITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK-NKLTDDALQM- 638
Query: 301 YMNKIGFDSNLEA--YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 354
+ N D LEA +N ++D L K G+ D A ++F + V + +TY M N+
Sbjct: 639 FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 698
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
L +L LS +G + +V L G
Sbjct: 699 QGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 735
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 151/333 (45%), Gaps = 14/333 (4%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI---CGDLTPCTATFNIMLN 109
+ DE+L G ++ N + + + P A + M ++TP T+ I++
Sbjct: 37 VFDELLRRGRGASIYGLNRALADVAR-DSPAAAVSRYNRMARAGADEVTPDLCTYGILIG 95
Query: 110 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR-WILKELGDSGHA 168
C+ D + K GF + + + L+KGLC R A +L+ + + G
Sbjct: 96 CCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 155
Query: 169 PNAITYTTIMK-CCFRNRKYKLGLEILSAM---KRKGYTFDGFGYCTVIAAFVKIGRLKE 224
PN +Y ++K C NR + LE+L M + G D Y TVI F K G +
Sbjct: 156 PNVFSYNILLKGLCDENRSQE-ALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDK 214
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A +M+ G+ D+V+YN++I CK ++ A +L+ M K G D T+ ++
Sbjct: 215 AYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 274
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 340
G C +G K A L+ M G + ++ Y+ ++D L K+G+ A +F+SM +
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ TY +++ L LL +++G+
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 102/240 (42%), Gaps = 35/240 (14%)
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
P+ TY ++ CC R + LG L + +KG+ D + ++ R +A D
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 229 MEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ---GFECDKYTHTILID 284
+ + +T+ G ++ SYN L+ C E + + A LL M G D ++T +I+
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT 344
G K G+ D Y+ ++DR + D T
Sbjct: 205 GFFKEGD---------------SDKAYSTYHEMLDR----------------GILPDVVT 233
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
Y+S++ LCKA+ + A ++L + +K+GV +++ G SG +EA K+R
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR 293
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/239 (18%), Positives = 90/239 (37%), Gaps = 45/239 (18%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC+ + + M +G+SPD++TYN ++ G + + + +L + E G
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611
Query: 62 IPPDVWSYNSLMH-----------------------------------CLFQLGKPDEAN 86
++ +YN ++H L ++G+ DEA
Sbjct: 612 TQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAK 671
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+F L P T+ +M + + ++F ++ +G + N +++ L
Sbjct: 672 DLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVREL 731
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC----------FRNRKYKLGLEILS 195
+ G + A L + + + A T + + F KYK +E LS
Sbjct: 732 LQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKYQEYYRFLPEKYKSFIESLS 790
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 185/365 (50%), Gaps = 6/365 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM-GIPPDVWSYNSLMHCLFQLGKPDEANR 87
P+ VTYN++IAG + +L+++ EM E GI PD ++Y +L+ ++G+ ++A +
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVK 204
Query: 88 VFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
VF +M+ G++ P +N ++ G C D AL+ + + G + TYN+L+ L
Sbjct: 205 VFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHAL 264
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
R A +L+E+ +G +P+ TY ++ + K LE+ M +KG
Sbjct: 265 FMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATA 324
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y ++I F + G+++E V G++ D+V YN LIN +C G +E AY ++ E
Sbjct: 325 VTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAE 384
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
MEK+ D T+ L+ G C G + AR ++ M K G +L +YN ++ G
Sbjct: 385 MEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGD 444
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
I A+ V + M K TY++++ LCK ++ A L+ + G+ S +
Sbjct: 445 IKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYIS 504
Query: 383 VVDGL 387
+++GL
Sbjct: 505 LIEGL 509
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 185/358 (51%), Gaps = 8/358 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMRE-AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+I +C A ++ MRE GI+PD TY +LI+G + + ++ + DEML
Sbjct: 153 VIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTK 212
Query: 61 G-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G + P YN+L+ +GK D A + +DM+ + AT+N++++ L + +
Sbjct: 213 GEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASD 272
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + +QK+GF P++ TYNILI G CK G + A + +E+ G A+TYT+++
Sbjct: 273 AYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIY 332
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
R + + + + +KG D Y +I + G ++ A + M +M +
Sbjct: 333 VFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPP 392
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLH 298
D ++YNTL+ +C G+L+ A L+DEM K+G + D ++ LI G G+IK A R+
Sbjct: 393 DDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVR 452
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
E M+K GF+ L YN ++ L K + D A N+ + M K D TY S++ L
Sbjct: 453 DEMMDK-GFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 176/397 (44%), Gaps = 49/397 (12%)
Query: 48 SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 107
+ SL L ++ + +P V S + L+ L A +F D+ L CT TFNIM
Sbjct: 67 ATSLRLYAQLKSLSVPIPVASLHPLLSSL----PSAPAFALFADIYRLRLPLCTTTFNIM 122
Query: 108 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 167
L LC AL + R + + P VTYN +I G C GR++ A +++E+ + G
Sbjct: 123 LRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREMRERGG 178
Query: 168 -APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-YTFDGFGYCTVIAAFVKIGRLKEA 225
AP+ TY T++ + + + +++ M KG Y +I + +G+L A
Sbjct: 179 IAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVA 238
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
Y E MV G+ + + +YN L++ + + AY +L+EM+K GF D +T+ ILI+G
Sbjct: 239 LQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILING 298
Query: 286 LCKAGNIKGARLHLEYMN-----------------------------------KIGFDSN 310
CK GN K A E M+ K G +
Sbjct: 299 YCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPD 358
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
+ YN +++ G ++ A + ME K D TY++++ C RL A L+
Sbjct: 359 VVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLID 418
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
K G++ + ++ G G ++A +++ ++
Sbjct: 419 EMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEM 455
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 99/213 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ + + M + G+ VTY SLI +R + + L + ++
Sbjct: 294 ILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKK 353
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PDV YN+L++ G + A + +M + P T+N ++ G C D A
Sbjct: 354 GIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEA 413
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K G P+LV+YN LI G G ++ A + E+ D G P +TY +++
Sbjct: 414 RTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQG 473
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
+ R+ ++ M KG T D Y ++I
Sbjct: 474 LCKIRQGDDAENLMKEMVAKGITPDDSTYISLI 506
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 191/381 (50%), Gaps = 8/381 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
+LI++ C F + M RE + PD TYN+LI+G + + LL EM +
Sbjct: 50 VLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRD 109
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
I +V++Y+S++ L + KP+E+ +V ++M+ P FN ++ G ++ +
Sbjct: 110 KNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEK 169
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG--DSGHAPNAITYTTI 177
A +++ + + G+ P+ V+Y+ILI GL K G+L + IL E+ +G+ PN IT++T+
Sbjct: 170 AREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTL 229
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ R + + LE+ +M G + + Y T+IA + ++ +A + E+M +
Sbjct: 230 IHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACI 289
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEME-KQGFECDKYTHTILIDGLCKAGNIKGAR 296
D V+YN+LI YCK G ++ A L EM G + T LIDG CK G + A
Sbjct: 290 PPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRAN 349
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
+ M G ++ Y ++ L + K+D A+ V++ M K D + S V L
Sbjct: 350 ELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGL 409
Query: 353 CKAKRLPSASKLLLSCLKSGV 373
CK + A + + KSG
Sbjct: 410 CKTGNIDQAYAVFEATRKSGA 430
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 182/384 (47%), Gaps = 8/384 (2%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
Y+ ++ + +L+ +L++ + M P + +YN L++ G+ +A +FQ M
Sbjct: 12 AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71
Query: 93 ICGD-LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
+ P T+N +++GLC + T+ A ++ ++ + TY+ +IK L K +
Sbjct: 72 KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
+ +L+E+ +G P+ + +M+ R+ + E+ M GY D Y
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191
Query: 212 VIAAFVKIGRLKEATDYMEQMV--TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
+I KIG+L E+ + +M G ++++++TLI+ C+ G+LE A + M +
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 329
G + +KYT+T LI GLC+A + AR E M + + AYN ++ K G +D
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311
Query: 330 AINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 384
A ++ M T+++++ CK +L A++L+ G+ + ++
Sbjct: 312 AEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILI 371
Query: 385 DGLRHSGCRREAKKIQSKIRMAKI 408
GL + EA ++ ++R K
Sbjct: 372 AGLSRATKLDEALEVYKQMREKKF 395
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 5/214 (2%)
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M + G Y V+ + K G L +A + E M ++ +V+YN LIN C G+
Sbjct: 1 MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60
Query: 257 LEAAYLLLDEMEKQG-FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
A L M+++ E D++T+ LI GLC +GN +GAR L M +N+ Y+
Sbjct: 61 FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120
Query: 316 CIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
I+ L K+ K + + V E M D F ++ ++ ++ + A ++ ++S
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES 180
Query: 372 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
G + + ++ GL G E+ KI S++ M
Sbjct: 181 GYKPDNVSYHILIHGLAKIGKLDESLKILSEMAM 214
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 205/442 (46%), Gaps = 39/442 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++A C S D +L + G PDVV+YN+++ G C +L++EM+ M
Sbjct: 234 LVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRM 293
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PP++ ++N+L+ L + G + + V M+ TP + +++G+CK + + A
Sbjct: 294 ACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVA 353
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + +G P +V YN L+KGLC A R +L E+ D + +T+ ++
Sbjct: 354 HEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDF 413
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT-------------- 226
+N +E+L M G D Y TVI F K G + EA
Sbjct: 414 FCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPN 473
Query: 227 ---------------------DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
D M QM+ G L+ +++NTLIN CK+G +E A LL
Sbjct: 474 TISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLK 533
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+M G D +++ +IDGL KAG A L M G N Y+ I L ++G
Sbjct: 534 QMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREG 593
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+I+ I +F++++ D+ Y++++ +LCK A + L + SG +S
Sbjct: 594 RINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYT 653
Query: 382 AVVDGLRHSGCRREAKKIQSKI 403
++ GL G +EA+++ +++
Sbjct: 654 ILIRGLASEGFVKEAQEMLTEL 675
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 180/369 (48%), Gaps = 4/369 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++A C+ F + +L + G + DV N ++ + +L LL ++
Sbjct: 199 VILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSF 258
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV SYN+++ L + + ++M+ P TFN +++ LC+N +
Sbjct: 259 GCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERV 318
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + +HG P++ Y +I G+CK G L A IL + G PN + Y T++K
Sbjct: 319 HEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKG 378
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+++ E+L+ M K D + ++ F + G + + +EQM+ G D
Sbjct: 379 LCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPD 438
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++Y T+IN +CKEG ++ A +LL M G + + ++TI++ GLC A A +
Sbjct: 439 VITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMS 498
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
M + G N +N +++ L K G ++ AI + + M V D +YS+++ L KA
Sbjct: 499 QMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 558
Query: 357 RLPSASKLL 365
+ A +LL
Sbjct: 559 KTDEALELL 567
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 157/349 (44%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ + + ILNRM G+ P+VV YN+L+ G + +LL EM +
Sbjct: 340 IIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKD 399
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P D ++N L+ Q G D + + M+ P T+ ++NG CK D A+
Sbjct: 400 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAV 459
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P ++Y I++KGLC A R A ++ ++ G N IT+ T++
Sbjct: 460 MLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFL 519
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + +E+L M G + D Y TVI K G+ EA + + MV G+ +
Sbjct: 520 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNT 579
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ Y+++ + +EG++ + D ++ D + +I LCK G + A L Y
Sbjct: 580 IIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAY 639
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVH 350
M G N Y ++ L +G + A + + K + M H
Sbjct: 640 MVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKH 688
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 164/362 (45%), Gaps = 15/362 (4%)
Query: 34 YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
YN+++AG R L + L + +PP+ ++Y ++ L G+ +A V +M
Sbjct: 130 YNAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186
Query: 94 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 153
P ++++L C+ +A+R+ L G ++ N+++ +C G +
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246
Query: 154 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
A +L++L G P+ ++Y ++K +++ E++ M R + + T+I
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ + G + + + QMV G DI Y T+I+ CKEG LE A+ +L+ M G +
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE----AYNCIVDRLGKDGKIDH 329
+ + L+ GLC A + L M FD + +N +VD ++G +D
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEM----FDKDCPLDDVTFNILVDFFCQNGLVDR 422
Query: 330 AINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 385
I + E M + D TY+++++ CK + A LL S G + + V+
Sbjct: 423 VIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLK 482
Query: 386 GL 387
GL
Sbjct: 483 GL 484
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 208/437 (47%), Gaps = 39/437 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ + + D Y + M + GI P+VVTY+S+IA + + ++++L M++ G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +YNS++H G+P EA + M + P T+N +++ LCKN A
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+MF + K G PE+ TY L++G G L +L + +G PN ++ ++
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD------ 235
+ K + + S M+++G D Y TVI K GR+++A Y EQM+ +
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444
Query: 236 -----------------------------GVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
G+ LD + +N++I+ +CKEG++ + L D
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M + G + D T++ LIDG C AG + A L M +G + YN +++ K +
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
++ A+ +F ME D TY+ ++ L + +R +A +L + +SG ++ S
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624
Query: 383 VVDGLRHSGCRREAKKI 399
++ GL + EA ++
Sbjct: 625 ILHGLCKNNLTDEALRM 641
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 195/393 (49%), Gaps = 6/393 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYN 70
DA +L RM + G P+V +YN L+ G + +L+LL M + G PPDV SY
Sbjct: 144 DAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYT 203
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
++++ F+ G D+A + +M+ + P T++ ++ LCK + D A+ + + K+
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN 263
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G +P TYN ++ G C +G+ + A LK++ G P+ +TY ++M +N +
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
++ +M ++G + Y T++ + G L E ++ MV +G+ + ++ LI
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
Y K+GK++ A L+ +M +QG D T+ +I LCK+G ++ A + E M
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG 443
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
YN ++ L K D A + M + D+ ++S++ + CK R+ + KL
Sbjct: 444 NIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFD 503
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
++ GV+ ++DG +G EA K+
Sbjct: 504 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKL 536
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 189/402 (47%), Gaps = 4/402 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ YC L +M G+ PDVVTYNSL+ +N + + + D M + G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++ +Y +L+ G E + + M+ + P F+I++ K D A+
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++ G P+ VTY +I LCK+GR+ A +++ D +P I Y +++
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K+ E++ M +G D + ++I + K GR+ E+ + MV GV+ DI
Sbjct: 455 CIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 514
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y+TLI+ YC GK++ A LL M G + D T+ LI+G CK ++ A +
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHNLCKAKR 357
M G ++ YN I+ L + + A + + ES + TY+ ++H LCK
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
A ++ + + +++ ++ L G EAK +
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 176/360 (48%), Gaps = 10/360 (2%)
Query: 14 AGYTILNRMREAG---ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
A + NRM AG ++P++ TY LI L L +++ G D ++
Sbjct: 71 AAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFT 130
Query: 71 SLMHCLFQLGKPDEA-NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
L+ L + +A + V + M P ++NI+L GLC + AL + + +
Sbjct: 131 PLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPD 190
Query: 130 HGF--VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
G P++V+Y +I G K G L A E+ D G PN +TY++I+ + +
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
+E+L++M + G + Y +++ + G+ KEA ++++M +DGV+ D+V+YN+L
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
++ CK G+ A + D M K+G + + T+ L+ G G + L+ M + G
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASK 363
N ++ ++ K GK+D A+ VF M + D+ TY +++ LCK+ R+ A +
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 169/358 (47%), Gaps = 43/358 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI AY + D + ++MR+ G++PD VTY ++I ++ + ++ ++M++
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P YNSL+H L K D+A + +M+ + T FN +++ CK +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F + + G P+++TY+ LI G C AG++ A +L + G P+ +TY T++
Sbjct: 499 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN- 557
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
GYC KI R+++A +M + GV D
Sbjct: 558 ---------------------------GYC-------KISRMEDALVLFREMESSGVSPD 583
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++YN ++ + + AA L + + G + + T+ I++ GLCK N+ L +
Sbjct: 584 IITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK-NNLTDEALRM- 641
Query: 301 YMNKIGFDSNLE--AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNL 352
+ N D LE +N ++ L K G+ D A ++F ++ V D TYS M NL
Sbjct: 642 FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 699
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 152/312 (48%), Gaps = 2/312 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + C F +D ++ M + GI D + +NS+I + + S L D M+ +G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ +Y++L+ GK DEA ++ M+ + P T+N ++NG CK ++AL
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR ++ G P+++TYNI+++GL + R A+ + + +SG TY I+
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGL 629
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N L + + + + +I A +K+GR EA D + +G+ D+
Sbjct: 630 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDV 689
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y+ + ++G LE L ME+ G + ++ L + G+I A +L
Sbjct: 690 RTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFM 749
Query: 302 MNKIGFDSNLEA 313
+++ F +LEA
Sbjct: 750 IDEKHF--SLEA 759
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 134/291 (46%), Gaps = 7/291 (2%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG--DLTPCTATFNIMLNG 110
+ DE+L G ++ N + + + +R + G ++TP T+ I++
Sbjct: 41 VFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGS 100
Query: 111 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHAP 169
C D + K GF + + + L+KGLC R A +L+ + G P
Sbjct: 101 CCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIP 160
Query: 170 NAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGY--TFDGFGYCTVIAAFVKIGRLKEAT 226
N +Y ++K C NR + LE+L M G D Y TVI F K G L +A
Sbjct: 161 NVFSYNILLKGLCDENRSQE-ALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+M+ G+ ++V+Y+++I CK ++ A +L M K G + T+ ++ G
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
C +G K A L+ M+ G + ++ YN ++D L K+G+ A +F+SM
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 115/249 (46%), Gaps = 7/249 (2%)
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P L TY ILI C AGRL L + G +AI +T ++K +++ ++
Sbjct: 88 TPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 147
Query: 193 I-LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG--VQLDIVSYNTLIN 249
I L M + G + F Y ++ R +EA + ++ M DG D+VSY T+IN
Sbjct: 148 IVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVIN 207
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
+ KEG L+ AY EM +G + T++ +I LCKA + A L M K G
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMP 267
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 365
N YN IV G+ AI + M D TY+S++ LCK R A K+
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327
Query: 366 LSCLKSGVR 374
S K G++
Sbjct: 328 DSMTKRGLK 336
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 97/248 (39%), Gaps = 44/248 (17%)
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY--MEQMVTDGVQLDIVSYNTLINL 250
+ + R+G +G +A + + Y M + D V ++ +Y LI
Sbjct: 41 VFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGS 100
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDS 309
C G+L+ + L + K+GF D T L+ GLC A + L M ++G
Sbjct: 101 CCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIP 160
Query: 310 NLEAYN-------------------------------------CIVDRLGKDGKIDHAIN 332
N+ +YN +++ K+G +D A
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220
Query: 333 VFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
+ M + + TYSS++ LCKA+ + A ++L S +K+GV ++V G
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280
Query: 389 HSGCRREA 396
SG +EA
Sbjct: 281 SSGQPKEA 288
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 183/356 (51%), Gaps = 7/356 (1%)
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
M G PP+ ++N+L++ + G+P + R+ + M + P ++N +L GLCK
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 117 TDNALRMFRGLQKHG--FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
A + R + G P+LVTY+ L+ G CKAG++ +R +LKE+ G P+A+ Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
T +M ++ + LE+L M R G + T+I+ + L+ A ++ M
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
GV+ D+V+YNTL++ CK G+L+ A LL+ M+ G D ++ + GLCK+G +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-----FTYSSMV 349
A LE M D N+ YN I+D L K GKID A+ + E M D YS++V
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
LCK R A ++ + ++G R ++V+GL +G EA + ++ M
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAM 356
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/385 (30%), Positives = 197/385 (51%), Gaps = 7/385 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M G P+ VT+N+L+ G ++ LL+ M GI P+V SYN L+ L +L +
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 82 PDEANRVFQDMIC--GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
EA + +DMI G TP T++ +L+G CK + + + + + G P+ + Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
++ LCK+ RL A +L+E+ +G P IT+ T++ C R + ++ +L M
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
G D Y T++ K GRL+EA +E+M G D+V+Y++ + CK GK+
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM-NKIGFDSNLEAYNCIV 318
A+ +L++M + + T+ ++DGLCK+G I A +E M + G N+ Y+ +V
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300
Query: 319 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
D L K G+ A +V E+M D TYSS+V+ LCKA ++ A + + G +
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360
Query: 375 ILKSAQKAVVDGLRHSGCRREAKKI 399
++V GL G EA+++
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERM 385
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 195/403 (48%), Gaps = 47/403 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRM--REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
L++ C+ + ++ M R +PD+VTY++L++G + + S +LL E++
Sbjct: 51 LLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVIS 110
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G+ PD Y +M L + + EA + ++MI P TFN +++G C+ + +
Sbjct: 111 RGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEM 170
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR-------------------------- 153
A + + + G ++VTYN L+ GLCKAGRL+
Sbjct: 171 ADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVY 230
Query: 154 ---------TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK-GYT 203
A +L+++ DS H PN +TY TI+ ++ K LE++ M G
Sbjct: 231 GLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCG 290
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
+ GY TV+ K+GR +EA ME M G + D+V+Y++L+N CK GK+E A
Sbjct: 291 LNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEA 350
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF-----DSNLEAYNCIV 318
+ EM +G + + T+ L+ GLC G + A +E M+ G ++ YN ++
Sbjct: 351 VREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALI 410
Query: 319 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
L K G+ID A+ F+ M + D +YS++V L ++ R
Sbjct: 411 GGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGR 453
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 183/355 (51%), Gaps = 7/355 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHC 75
+L M GI P+VV+YN L+ G + + +L+ +M+ G PD+ +Y++L+
Sbjct: 32 LLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSG 91
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
+ GK +E+ + +++I L P + ++ LCK+ AL + + + G P
Sbjct: 92 YCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPT 151
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
L+T+N LI G C+ L A +L+ + SG + +TY T+M + + + ++L
Sbjct: 152 LITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLE 211
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
MK G D Y + + K G++ A +EQM ++V+YNT+++ CK G
Sbjct: 212 RMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSG 271
Query: 256 KLEAAYLLLDEM-EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
K++ A ++++M G + ++ ++DGLCK G + AR +E M + G ++ Y
Sbjct: 272 KIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTY 331
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
+ +V+ L K GKI+ A+ M ++ ++ TY S+VH LC RL A +++
Sbjct: 332 SSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMV 386
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 111/216 (51%), Gaps = 6/216 (2%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM-GIPPDVWSYNSLMH 74
+ +L +MR++ P+VVTYN+++ G ++ + +L+++++M G +V Y++++
Sbjct: 242 HQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVD 301
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
L +LG+ EA V + M P T++ ++NGLCK + A+ R + G P
Sbjct: 302 GLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKP 361
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSG----HAPNAI-TYTTIMKCCFRNRKYKL 189
VTY L+ GLC GRL A +++E+ G H P ++ TY ++ + +
Sbjct: 362 NAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDD 421
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
L+ M+ +G DG Y T++ + GR +A
Sbjct: 422 ALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 208/437 (47%), Gaps = 39/437 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ + + D Y + M + GI P+VVTY+S+IA + + ++++L M++ G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +YNS++H G+P EA + M + P T+N +++ LCKN A
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+MF + K G PE+ TY L++G G L +L + +G PN ++ ++
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD------ 235
+ K + + S M+++G D Y TVI K GR+++A Y EQM+ +
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444
Query: 236 -----------------------------GVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
G+ LD + +N++I+ +CKEG++ + L D
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M + G + D T++ LIDG C AG + A L M +G + YN +++ K +
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
++ A+ +F ME D TY+ ++ L + +R +A +L + +SG ++ S
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624
Query: 383 VVDGLRHSGCRREAKKI 399
++ GL + EA ++
Sbjct: 625 ILHGLCKNNLTDEALRM 641
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 195/393 (49%), Gaps = 6/393 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYN 70
DA +L RM + G P+V +YN L+ G + +L+LL M + G PPDV SY
Sbjct: 144 DAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYT 203
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
++++ F+ G D+A + +M+ + P T++ ++ LCK + D A+ + + K+
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN 263
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G +P TYN ++ G C +G+ + A LK++ G P+ +TY ++M +N +
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
++ +M ++G + Y T++ + G L E ++ MV +G+ + ++ LI
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
Y K+GK++ A L+ +M +QG D T+ +I LCK+G ++ A + E M
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG 443
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
YN ++ L K D A + M + D+ ++S++ + CK R+ + KL
Sbjct: 444 NIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFD 503
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
++ GV+ ++DG +G EA K+
Sbjct: 504 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKL 536
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 189/402 (47%), Gaps = 4/402 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ YC L +M G+ PDVVTYNSL+ +N + + + D M + G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++ +Y +L+ G E + + M+ + P F+I++ K D A+
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++ G P+ VTY +I LCK+GR+ A +++ D +P I Y +++
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K+ E++ M +G D + ++I + K GR+ E+ + MV GV+ DI
Sbjct: 455 CIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 514
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y+TLI+ YC GK++ A LL M G + D T+ LI+G CK ++ A +
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHNLCKAKR 357
M G ++ YN I+ L + + A + + ES + TY+ ++H LCK
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
A ++ + + +++ ++ L G EAK +
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 176/360 (48%), Gaps = 10/360 (2%)
Query: 14 AGYTILNRMREAG---ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
A + NRM AG ++P++ TY LI L L +++ G D ++
Sbjct: 71 AAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFT 130
Query: 71 SLMHCLFQLGKPDEA-NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
L+ L + +A + V + M P ++NI+L GLC + AL + + +
Sbjct: 131 PLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPD 190
Query: 130 HGF--VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
G P++V+Y +I G K G L A E+ D G PN +TY++I+ + +
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
+E+L++M + G + Y +++ + G+ KEA ++++M +DGV+ D+V+YN+L
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
++ CK G+ A + D M K+G + + T+ L+ G G + L+ M + G
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASK 363
N ++ ++ K GK+D A+ VF M + D+ TY +++ LCK+ R+ A +
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 169/358 (47%), Gaps = 43/358 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI AY + D + ++MR+ G++PD VTY ++I ++ + ++ ++M++
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P YNSL+H L K D+A + +M+ + T FN +++ CK +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F + + G P+++TY+ LI G C AG++ A +L + G P+ +TY T++
Sbjct: 499 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN- 557
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
GYC KI R+++A +M + GV D
Sbjct: 558 ---------------------------GYC-------KISRMEDALVLFREMESSGVSPD 583
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++YN ++ + + AA L + + G + + T+ I++ GLCK N+ L +
Sbjct: 584 IITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK-NNLTDEALRM- 641
Query: 301 YMNKIGFDSNLE--AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNL 352
+ N D LE +N ++ L K G+ D A ++F ++ V D TYS M NL
Sbjct: 642 FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 699
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 152/312 (48%), Gaps = 2/312 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + C F +D ++ M + GI D + +NS+I + + S L D M+ +G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ +Y++L+ GK DEA ++ M+ + P T+N ++NG CK ++AL
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR ++ G P+++TYNI+++GL + R A+ + + +SG TY I+
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGL 629
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N L + + + + +I A +K+GR EA D + +G+ D+
Sbjct: 630 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDV 689
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y+ + ++G LE L ME+ G + ++ L + G+I A +L
Sbjct: 690 RTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFM 749
Query: 302 MNKIGFDSNLEA 313
+++ F +LEA
Sbjct: 750 IDEKHF--SLEA 759
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 134/291 (46%), Gaps = 7/291 (2%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG--DLTPCTATFNIMLNG 110
+ DE+L G ++ N + + + +R + G ++TP T+ I++
Sbjct: 41 VFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGS 100
Query: 111 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHAP 169
C D + K GF + + + L+KGLC R A +L+ + G P
Sbjct: 101 CCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIP 160
Query: 170 NAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGY--TFDGFGYCTVIAAFVKIGRLKEAT 226
N +Y ++K C NR + LE+L M G D Y TVI F K G L +A
Sbjct: 161 NVFSYNILLKGLCDENRSQE-ALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+M+ G+ ++V+Y+++I CK ++ A +L M K G + T+ ++ G
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
C +G K A L+ M+ G + ++ YN ++D L K+G+ A +F+SM
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 115/249 (46%), Gaps = 7/249 (2%)
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P L TY ILI C AGRL L + G +AI +T ++K +++ ++
Sbjct: 88 TPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 147
Query: 193 I-LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG--VQLDIVSYNTLIN 249
I L M + G + F Y ++ R +EA + ++ M DG D+VSY T+IN
Sbjct: 148 IVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVIN 207
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
+ KEG L+ AY EM +G + T++ +I LCKA + A L M K G
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMP 267
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 365
N YN IV G+ AI + M D TY+S++ LCK R A K+
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327
Query: 366 LSCLKSGVR 374
S K G++
Sbjct: 328 DSMTKRGLK 336
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 97/248 (39%), Gaps = 44/248 (17%)
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY--MEQMVTDGVQLDIVSYNTLINL 250
+ + R+G +G +A + + Y M + D V ++ +Y LI
Sbjct: 41 VFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGS 100
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDS 309
C G+L+ + L + K+GF D T L+ GLC A + L M ++G
Sbjct: 101 CCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIP 160
Query: 310 NLEAYN-------------------------------------CIVDRLGKDGKIDHAIN 332
N+ +YN +++ K+G +D A
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220
Query: 333 VFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
+ M + + TYSS++ LCKA+ + A ++L S +K+GV ++V G
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280
Query: 389 HSGCRREA 396
SG +EA
Sbjct: 281 SSGQPKEA 288
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 190/377 (50%), Gaps = 4/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D +C+ I M +G++P+ TY +LI G + + +L + DEM+
Sbjct: 316 LLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITR 375
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ +V +YN+++ + + G+ +A +F +M+ + P T T+N++++G K+ A
Sbjct: 376 GLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKA 435
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++ P TY++LI GLC + L+ A +L ++ +G PN Y T++K
Sbjct: 436 CELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKA 495
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ +Y++ +E+L M G D F Y +I + +++EA + M G++ +
Sbjct: 496 YVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPN 555
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y INLY K G+++ A +M G + +TILI G C GN A +
Sbjct: 556 AHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFK 615
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAK 356
M + G ++ AY+ I+ L K+GK A+ VF ++ V D F Y+S++ CK
Sbjct: 616 CMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEG 675
Query: 357 RLPSASKLLLSCLKSGV 373
+ AS+L L +G+
Sbjct: 676 DIEKASQLYDEMLHNGI 692
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 183/374 (48%), Gaps = 11/374 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C +L++M G+ P+V Y +LI + S +++LL M+
Sbjct: 456 VLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIAN 515
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD++ YN L+ L + K +EA + DM + P T+ +N K+ A
Sbjct: 516 GVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVA 575
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R F+ + G VP V Y ILIKG C G A K + + G P+ Y+ I+
Sbjct: 576 ERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHS 635
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+N K K + + + G D F Y ++I+ F K G +++A+ ++M+ +G+ +
Sbjct: 636 LSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPN 695
Query: 241 IVSYNTLINL--YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA--R 296
IV YNTLIN YCK G L A+ L DEM +G D Y + ILIDG K GN++ A
Sbjct: 696 IVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSL 755
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
H +G +L A+N ++D K GK+ A +F+ M K + TY+ ++
Sbjct: 756 FHEAQQKSVG---SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAY 812
Query: 353 CKAKRLPSASKLLL 366
KA+ + A +L L
Sbjct: 813 GKAEMMEEAEQLFL 826
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 186/399 (46%), Gaps = 5/399 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I A+C+ G +L+ M E P++ TYN+ I G + + +L++ M+E G
Sbjct: 248 VIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y L+ + + EA +F+ M L P T+ +++G K + AL
Sbjct: 307 LGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEAL 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + G +VTYN +I G+ KAG + A + E+ +G P+ TY ++
Sbjct: 367 RIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGY 426
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ E+L+ MK + T F Y +I+ L++A + ++QM+ +GV+ ++
Sbjct: 427 LKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNV 486
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
Y TLI Y +E + E A LL M G D + + LI GLC+A ++ A++ L
Sbjct: 487 FMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVD 546
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M + G N Y ++ K G+I A F+ M V ++ Y+ ++ C
Sbjct: 547 MGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGN 606
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
A L+ G+ A A++ L +G +EA
Sbjct: 607 TVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEA 645
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 181/377 (48%), Gaps = 5/377 (1%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G P ++ N+L+ + +++ + M+E I PDV++Y +++ ++G +
Sbjct: 202 GFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKG 261
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
V +M + P T+N + GLC+ D AL + + + + G P+ TY +L+ G
Sbjct: 262 KMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDG 320
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
CK R + A+ I + + SG PN TYT ++ + + L I M +G +
Sbjct: 321 FCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLN 380
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y +I K G + +A +M+ G++ D +YN LI+ Y K + A LL
Sbjct: 381 VVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLA 440
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM+ + +T+++LI GLC + +++ A L+ M + G N+ Y ++ ++
Sbjct: 441 EMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQES 500
Query: 326 KIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+ + AI + + M + D F Y+ ++ LC+AK++ A LL+ + G++
Sbjct: 501 RYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYG 560
Query: 382 AVVDGLRHSGCRREAKK 398
A ++ SG + A++
Sbjct: 561 AFINLYSKSGEIQVAER 577
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 180/389 (46%), Gaps = 40/389 (10%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ N M AGI PD TYN LI G ++ ++ + +LL EM + P ++Y+ L+ L
Sbjct: 402 SLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGL 461
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+AN V MI + P + ++ + + A+ + + + +G +P+L
Sbjct: 462 CHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDL 521
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG------ 190
YN LI GLC+A ++ A+ +L ++G+ G PNA TY + ++ + ++
Sbjct: 522 FCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKD 581
Query: 191 --------------------------LEILSAMK---RKGYTFDGFGYCTVIAAFVKIGR 221
+E LS K KG D Y +I + K G+
Sbjct: 582 MLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGK 641
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
KEA + + GV D+ YN+LI+ +CKEG +E A L DEM G + +
Sbjct: 642 TKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNT 701
Query: 282 LID--GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
LI+ G CK+GN+ A + M G + Y ++D GK+G ++ A+++F +
Sbjct: 702 LINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQ 761
Query: 340 KDSFT---YSSMVHNLCKAKRLPSASKLL 365
K + ++S++ + CK ++ A +L
Sbjct: 762 KSVGSLSAFNSLIDSFCKHGKVIEARELF 790
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 194/446 (43%), Gaps = 68/446 (15%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI AY Q ++ +L M G+ PD+ YN LI G R + + LL +M E G
Sbjct: 492 LIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKG 551
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC--------- 112
I P+ +Y + ++ + G+ A R F+DM+ + P + I++ G C
Sbjct: 552 IKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEAL 611
Query: 113 --------------------------KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
KN T A+ +F K G VP++ YN LI G
Sbjct: 612 STFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGF 671
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIM------KCCFRNRKYKLGLEILSAMKRK 200
CK G + A + E+ +G PN + Y T++ K +KL E++S K
Sbjct: 672 CKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMIS----K 727
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G + DG+ YC +I K G L++A + V + ++N+LI+ +CK GK+ A
Sbjct: 728 GISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEA 786
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR---LHLEYMNKIG----FDSNLEA 313
L D+M + + T+TILID KA ++ A L +E N I + S L +
Sbjct: 787 RELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLS 846
Query: 314 YNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 369
YN I +R I++F+ ME + D+ Y M CK + A KLL L
Sbjct: 847 YNQIGNRF-------KMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSL 899
Query: 370 KSGVRILKSAQKAVVDGLRHSGCRRE 395
G+++ + V D L C+ +
Sbjct: 900 VEGIKL----EDDVFDALIFHLCKEK 921
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 156/325 (48%), Gaps = 13/325 (4%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM----HCL 76
+ + G+ PDV YNSLI+G + + + L DEML GI P++ YN+L+ +C
Sbjct: 651 KFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYC- 709
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ G EA ++F +MI ++P + I+++G K + AL +F Q+ V L
Sbjct: 710 -KSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS-VGSL 767
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+N LI CK G++ AR + ++ D PN +TYT ++ + + ++
Sbjct: 768 SAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLD 827
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M+ + + Y +++ ++ +IG + + M G+ D ++Y + + YCKEGK
Sbjct: 828 METRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGK 887
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS-NLEAYN 315
A LL++ +G + + LI LCK I LE ++++G + +L +
Sbjct: 888 SLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTV---LELLSEMGKEELSLSSKT 944
Query: 316 CIVDRLG--KDGKIDHAINVFESME 338
C LG K G D A V M+
Sbjct: 945 CNTLLLGFYKSGNEDEASKVLGVMQ 969
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 148/309 (47%), Gaps = 5/309 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIA--GATRNSLLSCSLDLLDEMLE 59
LI +C+ + + + M GI+P++V YN+LI G ++ L+ + L DEM+
Sbjct: 667 LISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMIS 726
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
GI PD + Y L+ + G ++A +F + + +A FN +++ CK+
Sbjct: 727 KGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSA-FNSLIDSFCKHGKVIE 785
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +F + P +VTY ILI KA + A + ++ PN +TYT+++
Sbjct: 786 ARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLL 845
Query: 180 CCFR-NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ ++K+ + + M+ +G D Y + +A+ K G+ EA + + + +G++
Sbjct: 846 SYNQIGNRFKM-ISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIK 904
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
L+ ++ LI CKE ++ LL EM K+ T L+ G K+GN A
Sbjct: 905 LEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKV 964
Query: 299 LEYMNKIGF 307
L M ++G+
Sbjct: 965 LGVMQRLGW 973
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 136/300 (45%), Gaps = 5/300 (1%)
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
LG +EA+ VF I P N ++ L K +++ + + VP++ T
Sbjct: 185 LGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYT 244
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
Y +IK CK G + + +L E+ + PN TY + + LE+ M
Sbjct: 245 YTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMM 303
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
KG DG Y ++ F K R KEA E M + G+ + +Y LI+ + KEG +E
Sbjct: 304 EKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIE 363
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A + DEM +G + + T+ +I G+ KAG + A M G + + YN ++
Sbjct: 364 EALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLI 423
Query: 319 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
D K + A + M+ + FTYS ++ LC + L A+++L +++GV+
Sbjct: 424 DGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVK 483
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 115/275 (41%), Gaps = 29/275 (10%)
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
L +Y+IL LC +G + A +L++L + P LEIL
Sbjct: 120 LHSYSILAIRLCNSGLIHQADNMLEKLLQTRKPP---------------------LEILD 158
Query: 196 AMKRKGYTFDGFG---YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
++ R F G + I F +G L EA+ +++G ++ N L+
Sbjct: 159 SLVRCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLL 218
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K + + + M + D YT+T +I CK G++ ++ L M K NL
Sbjct: 219 KANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLF 277
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 368
YN + L + G +D A+ V + M K D TY+ +V CK KR A + S
Sbjct: 278 TYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESM 337
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
SG+ + A++DG G EA +I+ ++
Sbjct: 338 PSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEM 372
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 69/175 (39%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDAY + + + M I P+ +TY SL+ + + L +M
Sbjct: 807 ILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEAR 866
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI D +Y + + GK EA ++ + + F+ ++ LCK +
Sbjct: 867 GIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTV 926
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
L + + K T N L+ G K+G A +L + G P +++ T
Sbjct: 927 LELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLT 981
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 194/391 (49%), Gaps = 4/391 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ + M G+ P+VVTYN++I G + + +LD M
Sbjct: 241 IMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNR 300
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD ++Y SL+ + + GK +EA+ + + M L P T+N +++G C A
Sbjct: 301 GVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKA 360
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + +P + TYN+LI L G++ A ++K++GDSG P++ITY ++
Sbjct: 361 FGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILING 420
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R K + M KG Y ++I K R+K A D E+++ +G D
Sbjct: 421 YCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPD 480
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++ +N LI+ +C G L+ A+ LL EM+K+ D+ T+ L+ G C+ G ++ AR L+
Sbjct: 481 LIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLK 540
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
M + G + +YN ++ K G I+ A + + M TY++++ LCK +
Sbjct: 541 EMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQ 600
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ A +LL + G+ S ++++G+
Sbjct: 601 QGDLAEELLKEMVSKGITPDDSTYFSLIEGI 631
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 179/365 (49%), Gaps = 4/365 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I YC + +L+ M+ G+ PD TY SLI+G + L + +L++M E+G
Sbjct: 277 VIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIG 336
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P +YN+L+ G +A +M+ + P +T+N++++ L D A
Sbjct: 337 LLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEAD 396
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + + G VP+ +TYNILI G C+ G + A + E+ G P +TYT+++
Sbjct: 397 GMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVL 456
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + K ++ + R+G + D + +I G L A +++M + D
Sbjct: 457 SKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDE 516
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTL+ C+EGK+E A LL EM+++G D ++ LI G K G+I A +
Sbjct: 517 VTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDE 576
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M IGF+ L YN ++ L K+ + D A + + M K D TY S++ + K
Sbjct: 577 MLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDD 636
Query: 358 LPSAS 362
AS
Sbjct: 637 SSEAS 641
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 190/407 (46%), Gaps = 4/407 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLI A C+ D + + M+E G+ P + T+N++++ + + L EM +
Sbjct: 171 MLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRL 230
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I V+++N +++ L + GK +A M + P T+N +++G C + A
Sbjct: 231 KIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGA 290
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++ G P+ TY LI G+CK G+L A IL+++ + G P A+TY T++
Sbjct: 291 RMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDG 350
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
M R+ Y +I A G++ EA ++ M G+ D
Sbjct: 351 YCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPD 410
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++YN LIN YC+ G + A+ L DEM +G + T+T LI L K +K A E
Sbjct: 411 SITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFE 470
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ + G +L +N ++D +G +D A + + M+ V D TY++++ C+
Sbjct: 471 KIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREG 530
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++ A +LL + G+R + ++ G G +A I+ ++
Sbjct: 531 KVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEM 577
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 155/323 (47%), Gaps = 6/323 (1%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
++ L+ +L + D+A F M + P TFN ML+ K T+ ++ +
Sbjct: 169 FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMF 228
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKY 187
+ + T+NI+I LCK G+L+ A+ + + + G PN +TY T++ C R R
Sbjct: 229 RLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVE 288
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
+ +L MK +G D + Y ++I+ K G+L+EA+ +E+M G+ V+YNTL
Sbjct: 289 GARM-VLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTL 347
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
I+ YC +G L A+ DEM ++ T+ +LI L G + A ++ M G
Sbjct: 348 IDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGI 407
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASK 363
+ YN +++ + G A N+ + M K TY+S+++ L K R+ +A
Sbjct: 408 VPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADD 467
Query: 364 LLLSCLKSGVRILKSAQKAVVDG 386
L ++ G A++DG
Sbjct: 468 LFEKIIREGASPDLIMFNALIDG 490
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 117/229 (51%), Gaps = 4/229 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ + + + + M GI P +VTY SLI ++ + + + DL ++++
Sbjct: 416 ILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIRE 475
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G PD+ +N+L+ HC G D A + ++M ++ P T+N ++ G C+ +
Sbjct: 476 GASPDLIMFNALIDGHC--ANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVE 533
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A + + +++ G P+ ++YN LI G K G + A I E+ G P +TY ++
Sbjct: 534 EARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALI 593
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
+ +N++ L E+L M KG T D Y ++I K+ EA+D
Sbjct: 594 QGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEASD 642
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 189/406 (46%), Gaps = 3/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C + +L +M + PD T+N LI + + + +L M + G
Sbjct: 236 LIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRG 295
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ +YN+LM EA +F M+ L P +N++++G CK + D A+
Sbjct: 296 EKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAM 355
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ L VP + +YN LI GLC +GR+ + +L E+ S P+ +TY ++
Sbjct: 356 VLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDAL 415
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + L +L M +KG + Y ++ + + A D +MV G++ DI
Sbjct: 416 CKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDI 475
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN LIN YCK ++ A +L EM + D ++ LIDGLC G I + L+
Sbjct: 476 LNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDE 535
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYSSMVHNLCKAKRL 358
M G ++ YN ++D K D AI++F + D +T ++V NLCK ++L
Sbjct: 536 MCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKL 595
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
A L L G +++ L G EA + SK+
Sbjct: 596 KMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKME 641
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 195/422 (46%), Gaps = 41/422 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDA C+ +L M + G PD+VTYN+L+ G + + +L + M++
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV +YN L+ + DEA +F+++ +L P A++N +++GLC + +
Sbjct: 330 GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK- 179
++ + P++VTYNILI LCK GR+ A +L + G PN +TY +M
Sbjct: 390 KKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449
Query: 180 CCFRN----------RKYKLGLE------------------------ILSAMKRKGYTFD 205
C RN R K GLE + M+ K D
Sbjct: 450 YCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPD 509
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y ++I +GR+ + +++M G D+++YN L++ +CK + A L
Sbjct: 510 IASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFR 569
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
++ +G D YT+ ++D LCK +K A L+++ G N++ Y +++ L KDG
Sbjct: 570 QI-VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDG 628
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG-VRILKSAQ 380
A+ + ME D+ T+ ++ L + A KL + G V I KS
Sbjct: 629 SFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIEKSLN 688
Query: 381 KA 382
++
Sbjct: 689 QS 690
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 189/442 (42%), Gaps = 45/442 (10%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
C+F + D T NRM P ++ L+ R ++ L ++ GI P +
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC-------------- 112
++ L++C F A + ++ P TFN ++NG C
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 113 ---------------------KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
KN AL + + ++K P LV Y+ LI GLCK G
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
+ A + ++G+ G +A+TY +++ C +++ ++L+ M R+ D + +
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+I A K GR+ EA + M G + DIV+YN L+ YC + A L + M K+G
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
E D + +LIDG CK + A + + + + +YN ++D L G+I H
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK 390
Query: 332 NVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ + M + D TY+ ++ LCK R+ A +L+ +K GV+ A++DG
Sbjct: 391 KLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGY 450
Query: 388 RHSGCRREAKKIQSKI--RMAK 407
C R + I RM K
Sbjct: 451 ----CLRNNVNVAKDIFNRMVK 468
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 187/378 (49%), Gaps = 4/378 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ Y +++L + ++G P++VT+N++I G N ++ +LD +L
Sbjct: 95 ILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQ 154
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D ++Y +L++ L + G+ A + Q+M + P ++ +++GLCK+ + +A
Sbjct: 155 GYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDA 214
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + + G + + VTYN LI G C GR + +L ++ P+ T+ ++
Sbjct: 215 LGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDA 274
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + +L+ M ++G D Y ++ + + EA + +MV G++ D
Sbjct: 275 LCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPD 334
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++YN LI+ YCK ++ A +L E+ + ++ LIDGLC +G I + L+
Sbjct: 335 VLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLD 394
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M+ ++ YN ++D L K+G+I A+ V M K + TY++M+ C
Sbjct: 395 EMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRN 454
Query: 357 RLPSASKLLLSCLKSGVR 374
+ A + +KSG+
Sbjct: 455 NVNVAKDIFNRMVKSGLE 472
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 162/365 (44%), Gaps = 34/365 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C +L+ M + PDVVTYN LI + + +L +L M++ G
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKG 435
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++ +YN++M + A +F M+ L P +N+++NG CK D A+
Sbjct: 436 VKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAI 495
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ ++ +P++ +YN LI GLC GR+ + +L E+ DSG +P+ ITY ++
Sbjct: 496 VLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAF 555
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + + + + +G D + ++ K +LK A D ++ ++ G ++
Sbjct: 556 CKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNV 614
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLE 300
+Y LIN CK+G A LLL +ME D T I+I L + K +L E
Sbjct: 615 QTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREE 674
Query: 301 YMNK--------------------IGFDSNLEAY------------NCIVDRLGKDGKID 328
+ + GF S E Y NC D + + +I
Sbjct: 675 MIARGLVNIEKSLNQSHNVFFPASSGFQSVTEFYRVQASHAGSHRFNCTTDPISRSNQIH 734
Query: 329 HAINV 333
H V
Sbjct: 735 HRFTV 739
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 196/393 (49%), Gaps = 12/393 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C+ D + G+ P +V YN+LI G ++ L+ +L L++EM E G
Sbjct: 336 LINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENG 395
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P++W+YN +++ L ++G +A+ + D I P T+N +++G CK D+A
Sbjct: 396 CLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSAT 455
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + G P+++TYN L+ GLCKAG+ I K + + G PN ITY I+
Sbjct: 456 EMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSL 515
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +K +++L MK KG D + T+ F KIG + A +M Q D+
Sbjct: 516 CKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEK---QYDV 572
Query: 242 ----VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGAR 296
+YN +++ + ++ + A L M+ G + D YT+ ++IDG CK GNI +G +
Sbjct: 573 CHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYK 632
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA- 355
LE M K F +L + +++ L K+ A+ + M K V+ + +A
Sbjct: 633 FLLENMEK-RFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKG--IVPETVNTIFEAD 689
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
K++ +A K+L+ L I + + DG+R
Sbjct: 690 KKVVAAPKILVEDLLKKGHIAYYTYELLYDGIR 722
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 173/355 (48%), Gaps = 7/355 (1%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
L +M G PD +TYNS+I G + ++ + +L + + G PD ++Y SL++ +
Sbjct: 283 LRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCK 342
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
G PD A VF+D + L P +N ++ GL + AL++ + ++G +P + T
Sbjct: 343 DGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWT 402
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
YN++I GLCK G + A ++ + G P+ TY T++ + K E+++ M
Sbjct: 403 YNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMW 462
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
+G T D Y T++ K G+ +E + + M G +I++YN +++ CK K+
Sbjct: 463 SQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVN 522
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD--SNLEAYNC 316
A LL EM+ +G + D + L G CK G+I GA M K +D YN
Sbjct: 523 EAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEK-QYDVCHTTATYNI 581
Query: 317 IVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLS 367
IV + ++ A+ +F M+ D++TY ++ CK + K LL
Sbjct: 582 IVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLE 636
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 183/384 (47%), Gaps = 14/384 (3%)
Query: 18 ILNRMREAGISPDVVTYNSLIAG---------ATRNSLLSCSLDLLDEMLEMGIPPDVWS 68
+L ++ + G+ P++ T+N + G A RNS + + + L +M+ G PD +
Sbjct: 238 LLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLT 297
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
YNS++ + G +ANRV +D + P T+ ++NG CK+ D A+ +F+
Sbjct: 298 YNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGL 357
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
G P +V YN LIKGL + G + A ++ E+ ++G PN TY ++ +
Sbjct: 358 GKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVS 417
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
++ KG D F Y T+I + K +L AT+ + +M + G+ D+++YNTL+
Sbjct: 418 DASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLL 477
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
N CK GK E + ME++G + T+ I++D LCKA + A L M G
Sbjct: 478 NGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLK 537
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-----DSFTYSSMVHNLCKAKRLPSASK 363
++ ++ + K G ID A +F ME + + TY+ +V + + A K
Sbjct: 538 PDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMK 597
Query: 364 LLLSCLKSGVRILKSAQKAVVDGL 387
L SG + V+DG
Sbjct: 598 LFSVMKNSGCDPDNYTYRVVIDGF 621
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 199/417 (47%), Gaps = 19/417 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ +F + + + RMR+ G+ DV TY I + + +L LL M E+G
Sbjct: 117 IMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELG 176
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ +Y +++ L+ G+ D A +F +M+ L P FN +++ LCK +
Sbjct: 177 CDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESE 236
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRL----RTARWI-----LKELGDSGHAPNAI 172
R+ + K G P L T+NI ++GLC+ G L R +R + L+++ + G P+ +
Sbjct: 237 RLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDL 296
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
TY +I+ + + +L KG+ D F YC++I F K G A +
Sbjct: 297 TYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDG 356
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
+ G++ IV YNTLI ++G + A L++EM + G + +T+ ++I+GLCK G +
Sbjct: 357 LGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCV 416
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 348
A ++ G ++ YN ++D K K+D A + M + D TY+++
Sbjct: 417 SDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTL 476
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
++ LCKA + ++ + + G +VD L C+ AKK+ + +
Sbjct: 477 LNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSL----CK--AKKVNEAVDL 527
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 181/397 (45%), Gaps = 28/397 (7%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGA--------TRNSLLSCSLDLLDEMLEMGI 62
F+ +L+ MRE N+L+ GA R + ++D + M
Sbjct: 55 EFEEMEKLLSEMREN-------VNNALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNC 107
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P V S+N++M+ L + G ++A++V+ M + T+ I + CK ALR
Sbjct: 108 DPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALR 167
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ R + + G V Y ++ GL +G AR + E+ P+ + + ++
Sbjct: 168 LLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLC 227
Query: 183 RNRKYKLGLEILSAMKRKG-----YTFDGF--GYCT--VIAAFVKIGRLKEATDYMEQMV 233
+ +L + ++G +TF+ F G C + V+ R+ EA +Y+ +MV
Sbjct: 228 KKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMV 287
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
G + D ++YN++I+ YCK+G ++ A +L + +GF+ D++T+ LI+G CK G+
Sbjct: 288 NGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPD 347
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
A + G ++ YN ++ L + G I A+ + M + + +TY+ ++
Sbjct: 348 RAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVI 407
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+ LCK + AS L+ + G ++DG
Sbjct: 408 NGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDG 444
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 139/325 (42%), Gaps = 48/325 (14%)
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
GK EA F+ M + P + N ++N L + Y + A +++ ++ G ++ TY
Sbjct: 90 GKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTY 149
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
I IK CK R A +L+ + + G NA+
Sbjct: 150 TIRIKSFCKTARPYAALRLLRNMPELGCDSNAV--------------------------- 182
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
YCTV+A G A + ++M+ + D+V++N L+++ CK+G +
Sbjct: 183 --------AYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFE 234
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAG----NIKGARL--HLEYMNKI---GFDSN 310
+ LL ++ K+G + +T I + GLC+ G ++ +R+ EY+ K+ GF+ +
Sbjct: 235 SERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPD 294
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
YN I+D K G + A V + K D FTY S+++ CK A +
Sbjct: 295 DLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFK 354
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSG 391
L G+R ++ GL G
Sbjct: 355 DGLGKGLRPSIVLYNTLIKGLSQQG 379
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 7/216 (3%)
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK--GYTFDGFGYCTVIAAFVKIGR 221
+ G A TY I++ + +++ ++LS M+ +G Y + + + G+
Sbjct: 33 EDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEG-AYIEAMKNYGRKGK 91
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
++EA D E+M + S+N ++N+ + G A+ + M +G + D YT+TI
Sbjct: 92 VQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTI 151
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 340
I CK A L M ++G DSN AY +V L G+ DHA +F+ M +
Sbjct: 152 RIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARC 211
Query: 341 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
D ++ +VH LCK + + +LL LK GV
Sbjct: 212 LCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGV 247
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D+ C+ + +L M+ G+ PDVV++ +L G
Sbjct: 510 IIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTG-------------------- 549
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG-DLTPCTATFNIMLNGLCKNRYTDN 119
++G D A ++F+ M D+ TAT+NI+++ + +
Sbjct: 550 ---------------FCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNM 594
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+++F ++ G P+ TY ++I G CK G + L E + P+ T+ ++
Sbjct: 595 AMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLN 654
Query: 180 CCFRNRKYKLGLEILSAMKRKG 201
C K + I+ M +KG
Sbjct: 655 CLCVKDKVHEAVGIIHLMLQKG 676
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 211/406 (51%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++AY + + ++++ +AG+SPD TY SLI G RN+ ++ + + + M G
Sbjct: 220 MVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKG 279
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ SY +++H L + G+ DE +F+ M D P T+ ++++ L N +
Sbjct: 280 CRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGM 339
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++ P + TY +++ +CK +L +R IL E+ + G P+ +TY +++
Sbjct: 340 DLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGY 399
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + LEIL M+ + Y +I F K + +A + +M+ + +
Sbjct: 400 CEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSL 459
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN+LI++ CK G ++AY LLD +++ G D++T+++ ID LCK+ ++ A
Sbjct: 460 VTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNS 519
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKR 357
+ + G +N Y ++D K GKID AI++ E M +D S TY+S+++ +CK +
Sbjct: 520 LKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGK 579
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ ++ + K GV+ + +++ + G A ++ +++
Sbjct: 580 VQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQM 625
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 184/412 (44%), Gaps = 41/412 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI YC+ ++ Y + N M G + V+Y ++I G + + L +M E
Sbjct: 255 LILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDD 314
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y ++H LF + E +F +M P T+ +M++ +CK R D +
Sbjct: 315 CYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESR 374
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + + G VP +VTYN LI+G C+ GR+ A IL + + PN TY ++ C
Sbjct: 375 RILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELI-CG 433
Query: 182 FRNRK------------------------------------YKLGLEILSAMKRKGYTFD 205
F RK + ++L +K G D
Sbjct: 434 FSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPD 493
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ Y I K R++EA D + G++ + V Y LI+ +CK GK++ A LL+
Sbjct: 494 QWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLE 553
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M + + T+ LI G+CK G ++ +E M+K+G + Y +++ + ++G
Sbjct: 554 RMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREG 613
Query: 326 KIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
DHA VF M D +TY++ +H C + + A ++ +++GV
Sbjct: 614 DFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGV 665
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 182/370 (49%), Gaps = 4/370 (1%)
Query: 31 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 90
V +YN L+ R ++ + EML I P++++ N++++ ++G EAN
Sbjct: 179 VRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVS 238
Query: 91 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 150
+ L+P + T+ ++ G C+N ++A ++F + G V+Y +I GLC+AG
Sbjct: 239 KIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAG 298
Query: 151 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
R+ + K++ + P TYT I+ F N + G+++ + M+ + + Y
Sbjct: 299 RIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYT 358
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
++ A K +L E+ + +M+ G+ +V+YN LI YC+EG++EAA +L ME
Sbjct: 359 VMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESN 418
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
++ T+ LI G K ++ A L M + +L YN ++ K G D A
Sbjct: 419 NCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSA 478
Query: 331 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+ + ++ V D +TYS + LCK+KR+ A L S + G++ + A++DG
Sbjct: 479 YKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDG 538
Query: 387 LRHSGCRREA 396
+G EA
Sbjct: 539 HCKAGKIDEA 548
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 160/337 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++DA C+ D ILN M E G+ P VVTYN+LI G + +L++L M
Sbjct: 359 VMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESN 418
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+ +YN L+ + +A + M+ LTP T+N +++ CK + D+A
Sbjct: 419 NCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSA 478
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ L+++G VP+ TY++ I LCK+ R+ A + L + G N + YT ++
Sbjct: 479 YKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDG 538
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + +L M + + Y ++I K G+++E +E M GV+
Sbjct: 539 HCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPT 598
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +Y LI +EG + A + ++M G + D YT+T I C +GN+K A +
Sbjct: 599 VATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMA 658
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M + G + Y ++ + G A NV + M
Sbjct: 659 RMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRM 695
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 151/317 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI YC+ +A IL M P+ TYN LI G ++ + ++ LL +MLE
Sbjct: 395 LIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESK 454
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P + +YNSL+H + G D A ++ + L P T+++ ++ LCK++ + A
Sbjct: 455 LTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEAC 514
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F L++ G V Y LI G CKAG++ A +L+ + PN+ TY +++
Sbjct: 515 DLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGV 574
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + GL ++ M + G Y +I ++ G A QMV+ G + D+
Sbjct: 575 CKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDV 634
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y I+ YC G ++ A ++ M + G D T+T+LI + G A L+
Sbjct: 635 YTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKR 694
Query: 302 MNKIGFDSNLEAYNCIV 318
M G D + +N ++
Sbjct: 695 MLDAGCDPSHPIWNNLI 711
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 49/205 (23%)
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDG----VQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
++I A V + ++ D++ QM D +L + SYN L+ + A +L++DE
Sbjct: 145 SMIKACVSVDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMML-------ARFLMIDE 197
Query: 267 MEKQGFEC-------DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
M++ E + YT +++ K GNI A L Y++KI
Sbjct: 198 MKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANL---YVSKI-------------- 240
Query: 320 RLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
F++ DSFTY+S++ C+ + SA K+ G R + +
Sbjct: 241 --------------FQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVS 286
Query: 380 QKAVVDGLRHSGCRREAKKIQSKIR 404
++ GL +G E + K+R
Sbjct: 287 YTTIIHGLCEAGRIDEGISLFKKMR 311
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 195/392 (49%), Gaps = 43/392 (10%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L+R E PDV+TY LI S + ++ LLDEM G PDV
Sbjct: 3 VLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDV----------- 51
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
T+N+++NG+CK D A++ + +G P ++
Sbjct: 52 ------------------------VTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVI 87
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG--LEILS 195
T+NI+++ +C GR A +L E+ G +P+ +T+ ++ F RK LG ++IL
Sbjct: 88 THNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILIN--FLCRKGLLGRAIDILE 145
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M G T + Y ++ F K ++ A Y+E MV+ G DIV+YNT++ CK+G
Sbjct: 146 KMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDG 205
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
K++AA LL+++ +G T+ +IDGL K G A L M G ++ Y+
Sbjct: 206 KVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYS 265
Query: 316 CIVDRLGKDGKIDHAINVFESME---VK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++ L ++GK++ AI F +E VK ++FTY+S++ LCKA++ A L +
Sbjct: 266 SLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISK 325
Query: 372 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
G + + + +++G+ + G +EA ++ +++
Sbjct: 326 GCKPTEVSYTILIEGIANEGLAKEALELLNEL 357
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 168/337 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+A C +L+ M G PDVVTYN L+ G + L ++ L+ M
Sbjct: 21 ILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSY 80
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V ++N ++ + G+ +A ++ +M+ +P TFNI++N LC+ A
Sbjct: 81 GSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRA 140
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + HG P ++YN L+ G CK ++ A L+ + G P+ +TY T++
Sbjct: 141 IDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTA 200
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K +E+L+ + KG + Y TVI K+G+ +A + + +M G++ D
Sbjct: 201 LCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPD 260
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++Y++LI +EGK+E A ++E G + + +T+ ++ GLCKA A L
Sbjct: 261 VITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLA 320
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
YM G +Y +++ + +G A+ + +
Sbjct: 321 YMISKGCKPTEVSYTILIEGIANEGLAKEALELLNEL 357
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 117/237 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ IL +M G +P+ ++YN L+ G + + ++ L+ M+
Sbjct: 126 ILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSR 185
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN+++ L + GK D A + + +P T+N +++GL K TD A
Sbjct: 186 GCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQA 245
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + ++ G P+++TY+ LI GL + G++ A ++ G PNA TY +IM
Sbjct: 246 VELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFG 305
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ ++ ++ L+ M KG Y +I G KEA + + ++ + GV
Sbjct: 306 LCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGV 362
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 127/284 (44%), Gaps = 40/284 (14%)
Query: 125 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
R L+K + P+++TY ILI+ C + A +L E+G G P+ +TY ++
Sbjct: 6 RQLEKECY-PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVN----- 59
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
G C K GRL EA ++ M + G Q +++++
Sbjct: 60 -----------------------GMC-------KEGRLDEAIKFLNSMPSYGSQPNVITH 89
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
N ++ C G+ A LL EM ++G T ILI+ LC+ G + A LE M
Sbjct: 90 NIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPT 149
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPS 360
G N +YN ++ K+ K+D AI E M + D TY++M+ LCK ++ +
Sbjct: 150 HGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDA 209
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
A +LL G + V+DGL G +A ++ ++R
Sbjct: 210 AVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 198/406 (48%), Gaps = 16/406 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++D C+ + +L +M E I P+VV Y+++I G ++ + + +L EM E
Sbjct: 218 IVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEK 277
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P++++YN +++ G+ EA R+ ++M ++P TF++++N L K A
Sbjct: 278 GISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEA 337
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G +P +TYN +I G K RL A + + G +P+ IT++ ++
Sbjct: 338 EELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDG 397
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ G+++L M R+G + Y T+I F ++G L A D +++M++ GV +
Sbjct: 398 YCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPN 457
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF-----------ECDKYTHTILIDGLCKA 289
+V+ NTL++ C GKL+ A + M+K E D T+ ILI GL
Sbjct: 458 VVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINE 517
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 345
G A E M G + YN ++D L K ++D A +F+SM K D T+
Sbjct: 518 GKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTF 577
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+++++ CK R+ ++ + G+ + ++ G G
Sbjct: 578 TTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVG 623
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 181/379 (47%), Gaps = 15/379 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ +C + +L M E +SPDVVT++ LI + + +L +EML G
Sbjct: 289 MINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRG 348
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+ +YNS++ + + D A R+F M +P TF+I+++G C + D+ +
Sbjct: 349 IIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGM 408
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + + G V +TY LI G C+ G L A +L+E+ SG PN +T T++
Sbjct: 409 KLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGL 468
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGF-----------GYCTVIAAFVKIGRLKEATDYME 230
N K K LE+ M++ D Y +I + G+ EA + E
Sbjct: 469 CNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYE 528
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+M G+ D ++YN++I+ CK+ +L+ A + D M +GF D T T LI+G CK G
Sbjct: 529 EMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVG 588
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYS 346
+ M + G +N Y ++ + G I+ A+++F+ M D+ T
Sbjct: 589 RVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIR 648
Query: 347 SMVHNLCKAKRLPSASKLL 365
+M+ L + L A + L
Sbjct: 649 NMLTGLWSKEELKRAVQCL 667
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 188/382 (49%), Gaps = 16/382 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ +L+RM E G+ P+ +TY +++ G + +L+LL +M E+
Sbjct: 183 LMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVS 242
Query: 62 -IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P+V Y++++ L++ G+ +A +F +M ++P T+N M+NG C + A
Sbjct: 243 RIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEA 302
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+ R + + P++VT+++LI L K G+ A + E+ G PN ITY +++
Sbjct: 303 QRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDG 362
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + M KG + D + +I + R+ + + +M G+ +
Sbjct: 363 FSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVAN 422
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++Y TLI+ +C+ G L AA LL EM G + T L+DGLC G +K A +
Sbjct: 423 TITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFK 482
Query: 301 YMNKIGFD-----------SNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 345
M K D +++ YN ++ L +GK A ++E M V D+ TY
Sbjct: 483 VMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITY 542
Query: 346 SSMVHNLCKAKRLPSASKLLLS 367
+S++ LCK RL A+++ S
Sbjct: 543 NSVIDGLCKQSRLDEATQMFDS 564
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 188/401 (46%), Gaps = 9/401 (2%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D ++ +M I ++ ++ LI S L +L ++ ++G P + ++++L
Sbjct: 93 DVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTL 152
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+H L + EA F IC P F ++NGLC+ A+ + + + G
Sbjct: 153 LHGLCVEDRVSEALHFFHQ-IC---KPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGL 208
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGD-SGHAPNAITYTTIMKCCFRNRKYKLGL 191
P +TY ++ G+CK G +A +L+++ + S PN + Y+ I+ +++ +
Sbjct: 209 QPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQ 268
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+ S M+ KG + + F Y +I F GR EA + +M + D+V+++ LIN
Sbjct: 269 NLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINAL 328
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
KEGK A L +EM +G + T+ +IDG K + A M G ++
Sbjct: 329 VKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDV 388
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
++ ++D ++D + + M V ++ TY++++H C+ L +A LL
Sbjct: 389 ITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQE 448
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+ SGV ++DGL ++G ++A ++ ++ +K+
Sbjct: 449 MISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKM 489
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 155/341 (45%), Gaps = 46/341 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL------------- 47
+LI+A + F + N M GI P+ +TYNS+I G ++ + L
Sbjct: 323 VLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATK 382
Query: 48 SCSLD----------------------LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
CS D LL EM G+ + +Y +L+H QLG + A
Sbjct: 383 GCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAA 442
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK--------HGF---VP 134
+ Q+MI + P T N +L+GLC N +AL MF+ +QK H F P
Sbjct: 443 LDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEP 502
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
++ TYNILI GL G+ A + +E+ G P+ ITY +++ + + ++
Sbjct: 503 DVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMF 562
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
+M KG++ D + T+I + K+GR+ + + +M G+ + ++Y TLI+ +C+
Sbjct: 563 DSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQV 622
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G + A + EM G D T ++ GL +K A
Sbjct: 623 GNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 663
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 150/350 (42%), Gaps = 9/350 (2%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P V+ + L+ R + L +M IP +++S+ L+ C K A
Sbjct: 74 PCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALST 133
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
F + P TF+ +L+GLC AL F + K P ++ + L+ GLC+
Sbjct: 134 FGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICK----PNVIAFTTLMNGLCR 189
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
GR+ A +L + + G PN ITY TI+ + L +L M+
Sbjct: 190 EGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVV 249
Query: 209 -YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y +I K GR +A + +M G+ ++ +YN +IN +C G+ A LL EM
Sbjct: 250 IYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREM 309
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
++ D T ++LI+ L K G A M G N YN ++D K ++
Sbjct: 310 FERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRL 369
Query: 328 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
D A +F M K D T+S ++ C AKR+ KLL + G+
Sbjct: 370 DAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGL 419
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 136/310 (43%), Gaps = 9/310 (2%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
D+A +F M+ PC F +L + + D + + R ++ + ++ IL
Sbjct: 58 DDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTIL 117
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
IK C +L A ++ G P+ +T++T++ + L + +
Sbjct: 118 IKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKPNV 177
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
+ T++ + GR+ EA +++MV DG+Q + ++Y T+++ CK G +A
Sbjct: 178 ----IAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALN 233
Query: 263 LLDEMEKQG-FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
LL +ME+ + + ++ +IDGL K G A+ M + G NL YNC+++
Sbjct: 234 LLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGF 293
Query: 322 GKDGKIDHAI----NVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
G+ A +FE D T+S +++ L K + A +L L G+
Sbjct: 294 CSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNT 353
Query: 378 SAQKAVVDGL 387
+++DG
Sbjct: 354 ITYNSMIDGF 363
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
+C ++ V++ R +M + +I S+ LI +C KL A ++
Sbjct: 79 FCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKIT 138
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
K GF T + L+ GLC + A L + ++I N+ A+ +++ L ++G++
Sbjct: 139 KLGFHPSLVTFSTLLHGLCVEDRVSEA---LHFFHQI-CKPNVIAFTTLMNGLCREGRVV 194
Query: 329 HAINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLL-----LSCLKSGVRILKS 378
A+ + + M V+D TY ++V +CK SA LL +S +K V I
Sbjct: 195 EAVALLDRM-VEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIY-- 251
Query: 379 AQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
A++DGL G + +A+ + S+++ IS
Sbjct: 252 --SAIIDGLWKDGRQTDAQNLFSEMQEKGIS 280
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 81/174 (46%)
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ F +I L +A D MV ++ + L+ + + + + L +ME +
Sbjct: 49 SGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIP 108
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
C+ Y+ TILI C + A + K+GF +L ++ ++ L + ++ A++
Sbjct: 109 CNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHF 168
Query: 334 FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
F + + ++++++ LC+ R+ A LL ++ G++ + +VDG+
Sbjct: 169 FHQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 222
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 180/357 (50%), Gaps = 4/357 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ D + + +RM + G +P+ VTY++LI G + ++D+L+EM E G
Sbjct: 238 LILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKG 297
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P V++Y + L +G+ D+A + + M +P T+ +++GL + + A+
Sbjct: 298 IEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAI 357
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M+ + K G VP VTYN LI LC GR A I + G NA TY I+K
Sbjct: 358 GMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGL 417
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F + + + + M + G + Y T+I +K G L AT ++ M + D
Sbjct: 418 FGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDE 477
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y LI+ +CK GKL++A EM K G +++T+T +IDG CK G I A E
Sbjct: 478 RTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFER 537
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
M + G +++E YN I+ L K + A M + ++ TY+S+++ LCK
Sbjct: 538 MEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCK 594
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 192/406 (47%), Gaps = 8/406 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ + N++ + + PD TY SLI G RN L + ++ D M++ G
Sbjct: 203 MINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDG 262
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y++L++ L G+ EA + ++M + P T+ + ++ LC D+A+
Sbjct: 263 CNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAI 322
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ R + K G P + TY +I GL +AG++ A + ++ G PN +TY ++
Sbjct: 323 NLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINEL 382
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + L+I M+ G + Y +I + +++A +M+ DG +
Sbjct: 383 CTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTV 442
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTLI K G L A L M++ E D+ T+ LI G CK G + A
Sbjct: 443 VTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYE 502
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKR 357
M K G N Y ++D K+GKID A+++FE ME TY++++ L K R
Sbjct: 503 MLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNR 562
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A K + G++ ++++GL C+ A + KI
Sbjct: 563 FSEAEKFCAKMTEQGLQPNTITYTSLINGL----CKNTATNLAFKI 604
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 174/358 (48%), Gaps = 4/358 (1%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
++N+L+ + +++ + ++ ++ G+ P + ++N++++ L + GK EA VF +
Sbjct: 164 SFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKI 223
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
DL P T+ ++ G C+NR D A +F + K G P VTY+ LI GLC GR+
Sbjct: 224 FQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRI 283
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
A +L+E+ + G P TYT + + + ++ +M +KG + Y +
Sbjct: 284 GEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAI 343
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I+ + G+++ A +M+ +G+ + V+YN LIN C EG+ A + D ME G
Sbjct: 344 ISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGT 403
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
+ T+ +I GL +I+ A + M K G + YN ++ K G +++A
Sbjct: 404 LANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATR 463
Query: 333 VF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
ES D TY ++ CK +L SA+ LK G+ + A++DG
Sbjct: 464 FLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDG 521
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 157/321 (48%), Gaps = 4/321 (1%)
Query: 20 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 79
++M + G+ P+ VTYN+LI +L + D M G + +YN ++ LF +
Sbjct: 361 HKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGM 420
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
++A VF M+ +P T+N ++ K Y +NA R +++ P+ TY
Sbjct: 421 DDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTY 480
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
LI G CK G+L +A E+ G +PN TYT ++ + K + L + M+
Sbjct: 481 CELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEE 540
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
G + Y +I+ K R EA + +M G+Q + ++Y +LIN CK
Sbjct: 541 NGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNL 600
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A+ + EMEK+ + +T+T LI GLC+ G + A E + + G + ++ Y+ +V
Sbjct: 601 AFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVS 656
Query: 320 RLGKDGKIDHAINVFESMEVK 340
L ++G+ + A + E+M+ K
Sbjct: 657 GLCREGRSNEASQLVENMKEK 677
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 158/325 (48%), Gaps = 4/325 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
+ + N+M + G SP VVTYN+LI + L+ + L M E PD +Y L
Sbjct: 424 EKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCEL 483
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ + GK D A F +M+ ++P T+ M++G CK D AL +F ++++G
Sbjct: 484 ISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGC 543
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+ TYN +I GL K R A ++ + G PN ITYT+++ +N L +
Sbjct: 544 SASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFK 603
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
I M++K + Y ++I + G++ D E++ +G + I +Y+TL++ C
Sbjct: 604 IFHEMEKKNCLPNAHTYTSLIYGLCQEGKV----DAAERLTENGCEPTIDTYSTLVSGLC 659
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
+EG+ A L++ M+++G + L+ CK+ + A M GF +L
Sbjct: 660 REGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLF 719
Query: 313 AYNCIVDRLGKDGKIDHAINVFESM 337
Y ++ L + + A+N+F+S+
Sbjct: 720 IYKVLICALCGVSRAEEALNIFQSL 744
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 150/325 (46%), Gaps = 4/325 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ D+ + M + GISP+ TY ++I G + + +L L + M E G
Sbjct: 483 LISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENG 542
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ +YN+++ L + + EA + M L P T T+ ++NGLCKN T+ A
Sbjct: 543 CSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAF 602
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F ++K +P TY LI GLC+ G++ A + L ++G P TY+T++
Sbjct: 603 KIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGL 658
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + +++ MK KG + YC+++ A K ++ A + M G Q +
Sbjct: 659 CREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHL 718
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
Y LI C + E A + + K+ + D T+L+DGL + G+ L
Sbjct: 719 FIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYL 778
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGK 326
M +L Y + L K GK
Sbjct: 779 MESRNCTPSLHTYIILARELSKVGK 803
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 143/294 (48%), Gaps = 4/294 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID YC+ D ++ RM E G S + TYN++I+G ++ + S + +M E G
Sbjct: 518 MIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQG 577
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +Y SL++ L + + A ++F +M + P T+ ++ GLC+ D A
Sbjct: 578 LQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAE 637
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R L ++G P + TY+ L+ GLC+ GR A +++ + + G +P+ Y +++
Sbjct: 638 R----LTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAH 693
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ K LEI + M KG+ F Y +I A + R +EA + + ++ D+
Sbjct: 694 CKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDL 753
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
+ + L++ +EG + L ME + +T+ IL L K G G
Sbjct: 754 IVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKSIGT 807
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 99/194 (51%), Gaps = 4/194 (2%)
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ F + + T++ K + A + Q+ + GV+ ++++NT+IN+ CK+GK++ A
Sbjct: 158 FGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAV 217
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
L+ +++ + D +T+T LI G C+ + A + M K G + N Y+ +++ L
Sbjct: 218 LVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGL 277
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
+G+I A+++ E M K +TY+ + +LC R+ A L+ S K G
Sbjct: 278 CNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSV 337
Query: 378 SAQKAVVDGLRHSG 391
A++ GL +G
Sbjct: 338 QTYTAIISGLFRAG 351
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 192/417 (46%), Gaps = 28/417 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGA------TRNSLLSCSLDLLD 55
L+ YC + Y + NRM G P V YN I LL + + +
Sbjct: 347 LVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYE 406
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
EML + + + CL +GK ++A ++ ++M+ P +T+ ++ LC+ +
Sbjct: 407 EMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAK 466
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D A +F+ ++K G P++ TY ILI CKAG + A+ E+ +G +PN +TYT
Sbjct: 467 RVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYT 526
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD-------- 227
++ ++++ +I M + Y +I K G +++A +
Sbjct: 527 ALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGT 586
Query: 228 --------YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
Y E TD + ++V+Y L+N CK K+ A+ LLD M G E ++ +
Sbjct: 587 SDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVY 646
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
L+DG CK G I A+ M K G+ ++ Y ++DR+ KDG++D A+ V M +
Sbjct: 647 DALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM-L 705
Query: 340 KDS-----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
KDS TY++MV LCK A LL K G A++DGL +G
Sbjct: 706 KDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAG 762
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 172/369 (46%), Gaps = 20/369 (5%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
C F+ + I+ M G PD TY +I + + + L EM ++G+ PDV
Sbjct: 428 CGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDV 487
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
++Y L+ + G ++A F +M +P T+ +L+ K++ A +F
Sbjct: 488 YTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHR 547
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL-GDSGH---------------APN 170
+ P +TY+ LI GLCKAG ++ A + +L G S + +PN
Sbjct: 548 MVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPN 607
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
+TY ++ + +K ++L AM G + Y ++ F K+G + A +
Sbjct: 608 VVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFL 667
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+M G + +Y +LI+ K+G+L+ A +L +M K + T+T ++DGLCK G
Sbjct: 668 RMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTG 727
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 346
+ A L M K G N+ Y ++D LGK GK+D + +F M+ K + TY
Sbjct: 728 ETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYR 787
Query: 347 SMVHNLCKA 355
++++ C A
Sbjct: 788 ILINHCCAA 796
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 150/334 (44%), Gaps = 16/334 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I CQ D + + M++ G++PDV TY LI + L+ + DEM G
Sbjct: 458 VITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAG 517
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +Y +L+H + + +AN +F M+ P T++ +++GLCK A
Sbjct: 518 CSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKAC 577
Query: 122 RM----------------FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
+ F G P +VTY L+ GLCKA ++ A +L + +
Sbjct: 578 EVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAA 637
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
G PN I Y ++ + + E+ M + GY Y ++I K GRL A
Sbjct: 638 GCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 697
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ QM+ D ++V+Y +++ CK G+ E A LL MEK+G + T+T LIDG
Sbjct: 698 MKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDG 757
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
L KAG + M G N Y +++
Sbjct: 758 LGKAGKVDAGLELFMQMKTKGCAPNYVTYRILIN 791
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 184/384 (47%), Gaps = 22/384 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID++C+ + + + MR AG SP+VVTY +L+ ++ L + D+ M+
Sbjct: 492 ILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGD 551
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI----------------CGDLTPCTATF 104
P+ +Y++L+ L + G+ +A V+ +I ++P T+
Sbjct: 552 ACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTY 611
Query: 105 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 164
++NGLCK + +A + + G P + Y+ L+ G CK G + +A+ + +
Sbjct: 612 GALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTK 671
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
G+ P+ TYT+++ F++ + L +++LS M + + Y ++ K G ++
Sbjct: 672 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEK 731
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A + + M G ++V+Y LI+ K GK++A L +M+ +G + T+ ILI+
Sbjct: 732 ALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILIN 791
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF- 343
C AG + A L L+ M + + L+ Y V K + ++ + E ME D+
Sbjct: 792 HCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSK--RFLASLGLLEEMESHDTAP 849
Query: 344 ---TYSSMVHNLCKAKRLPSASKL 364
Y ++ + KA RL +A +L
Sbjct: 850 IAPVYGMLIDSFSKAGRLETALEL 873
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 156/335 (46%), Gaps = 5/335 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ + +L+ M AG P+ + Y++L+ G + + + ++ M + G
Sbjct: 614 LVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCG 673
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y SL+ +F+ G+ D A +V M+ P T+ M++GLCK T+ AL
Sbjct: 674 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKAL 733
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++K G P +VTY LI GL KAG++ + ++ G APN +TY ++ C
Sbjct: 734 NLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHC 793
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+L MK+ + GY T + F K R + +E+M +
Sbjct: 794 CAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSK--RFLASLGLLEEMESHDTAPIA 851
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD---KYTHTILIDGLCKAGNIKGARLH 298
Y LI+ + K G+LE A L EM + + K HT LI LC + ++ A
Sbjct: 852 PVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVAL 911
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
M + G +L A+ C+V L + K + A+ +
Sbjct: 912 YSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQL 946
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 180/405 (44%), Gaps = 23/405 (5%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F+ + L+RMR P+VVTY +L+ G + L +++ M+ G P +NS
Sbjct: 287 FNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNS 346
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA--LRMFRGLQK 129
L+H A ++F M P +NI + +C N L + + +
Sbjct: 347 LVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYE 406
Query: 130 HGFVPELVTYNI----LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 185
V V I + LC G+ A I+KE+ G P+A TYT ++ + +
Sbjct: 407 EMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAK 466
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
+ + MK+ G D + Y +I +F K G +++A + ++M + G ++V+Y
Sbjct: 467 RVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYT 526
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
L++ Y K +L A + M + T++ LIDGLCKAG I+ A Y I
Sbjct: 527 ALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKA--CEVYAKLI 584
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 365
G N+E+ +GK I+ + TY ++V+ LCKA+++ A LL
Sbjct: 585 GTSDNIES------DFYFEGKDTDTIS-------PNVVTYGALVNGLCKAQKVSDAHDLL 631
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
+ L +G + A+VDG G A+++ +RM K +
Sbjct: 632 DAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEV--FLRMTKCGY 674
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 146/388 (37%), Gaps = 42/388 (10%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
L R+++ G P VTYN+L+ + + + EM G D + S L +
Sbjct: 192 LGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCK 251
Query: 79 LGKP--------------------------------DEANRVFQDMICGDLTPCTATFNI 106
G+ +EA M C P T+
Sbjct: 252 EGRWGDALDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRT 311
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L G K + R+ + G P +N L+ C A A + + G
Sbjct: 312 LLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCG 371
Query: 167 HAPNAITYTT-IMKCCFRN-----RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
P + Y I C R L ++ M + +G
Sbjct: 372 CPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVG 431
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
+ ++A +++M+ G D +Y +I C+ +++ A+LL EM+K G D YT+T
Sbjct: 432 KFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYT 491
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 338
ILID CKAG I+ A+ + M G N+ Y ++ K ++ A ++F M
Sbjct: 492 ILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGD 551
Query: 339 --VKDSFTYSSMVHNLCKAKRLPSASKL 364
++ TYS+++ LCKA + A ++
Sbjct: 552 ACYPNAITYSALIDGLCKAGEIQKACEV 579
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 166/437 (37%), Gaps = 53/437 (12%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
L R RE VV + GA R+ L L E ++G Y++L L
Sbjct: 91 FLRRYREFLTDSVVVA----VLGAVRSPELCVRFFLWAER-QVGYKHTGACYDALAEVLG 145
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
A R+ +++ D N+++ C AL L+ G+ P V
Sbjct: 146 FEDPARTAERLLREIGEDDRDVLGRLLNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAV 205
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS-- 195
TYN L++ L AG++ A + KE+ SG + T + + + ++ L++L
Sbjct: 206 TYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDALDLLERE 265
Query: 196 ------------------------------AMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
M+ Y + Y T++ F+K +L
Sbjct: 266 DFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWC 325
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ M+T+G +N+L++ YC AY L + M G + I I
Sbjct: 326 KRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGS 385
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD---------GKIDHAINVFES 336
+C + L L+ K+ ++ L A +C+++++ GK + A + +
Sbjct: 386 ICGREELPNPEL-LDLAEKV-YEEMLVA-SCVLNKINTANFARCLCGVGKFEKAFQIVKE 442
Query: 337 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 392
M V D+ TY+ ++ LC+AKR+ A L K GV ++D +G
Sbjct: 443 MMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGL 502
Query: 393 RREAKKIQSKIRMAKIS 409
+A+ ++R A S
Sbjct: 503 IEQAQSWFDEMRSAGCS 519
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 115/275 (41%), Gaps = 36/275 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID + D +L++M + +P+VVTY +++ G + +L+LL M + G
Sbjct: 684 LIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKG 743
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC--------- 112
P+V +Y +L+ L + GK D +F M P T+ I++N C
Sbjct: 744 CSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAH 803
Query: 113 ------KNRYTDNALRMFRG------------------LQKHGFVPELVTYNILIKGLCK 148
K + L+ +R ++ H P Y +LI K
Sbjct: 804 LLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSK 863
Query: 149 AGRLRTARWILKELGDSGHAPNAIT---YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
AGRL TA + KE+ + + N + +T++++ + + + + + S M+R+G D
Sbjct: 864 AGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPD 923
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ ++ + EA + +GV +
Sbjct: 924 LSAFVCLVKGLIERNKWNEALQLCYGICQEGVNWE 958
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 188/381 (49%), Gaps = 18/381 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMRE-AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+I+ +C + +L M E ISPDVVTYN+LI + + +L DEML
Sbjct: 261 MINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 320
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P +Y+S++ + + D A +F M +P TFN ++ G C+ + D+
Sbjct: 321 GIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDG 380
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + + G V +TY LI G C+ G L A+ +L+E+ SG PN +T T++
Sbjct: 381 IKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDG 440
Query: 181 CFRNRKYKLGLEILSAMKRK------GYTFDGF-----GYCTVIAAFVKIGRLKEATDYM 229
N K K LE+ AM++ + F+G Y +I+ + G+ EA +
Sbjct: 441 LCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 500
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
E+M G+ D ++YN++I+ CK+ +L+ A + D M + F + T T LI+G CKA
Sbjct: 501 EEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 560
Query: 290 GNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 344
G + G L E M + G +N Y ++ K G I+ A+++F+ M D+ T
Sbjct: 561 GRVDDGLELFCE-MGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTIT 619
Query: 345 YSSMVHNLCKAKRLPSASKLL 365
+M+ L + L A +L
Sbjct: 620 IRNMLTGLWSKEELKRAVAML 640
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 195/412 (47%), Gaps = 22/412 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ +L+RM E G+ P+ +TY +++ G + +L+LL +M E+
Sbjct: 185 LMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVS 244
Query: 62 -IPPDV--WSYNS---LMHCLFQLGKPDEANRVFQDMIC-GDLTPCTATFNIMLNGLCKN 114
I P+V W +++ G+ EA ++ Q+M+ ++P T+N ++N K
Sbjct: 245 HIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKE 304
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
A ++ + G +P +TY+ +I G CK RL A + + G +P+ IT+
Sbjct: 305 GKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITF 364
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
T++ R ++ G+++L M G + Y T+I F ++G L A D +++MV+
Sbjct: 365 NTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVS 424
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK-----------QGFECDKYTHTILI 283
GV ++V+ NTL++ C GKL+ A + M+K G E D T+ ILI
Sbjct: 425 SGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILI 484
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
GL G A E M G + YN ++ L K ++D A +F+SM K
Sbjct: 485 SGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFS 544
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ T++++++ CKA R+ +L + G+ ++ G R G
Sbjct: 545 PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVG 596
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 194/424 (45%), Gaps = 61/424 (14%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C + ++ + G P VVT+++L+ G +S +LDL +M +
Sbjct: 118 ILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK- 176
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+V ++ +LM+ L + G+ EA + M+ L P T+ +++G+CK T +A
Sbjct: 177 ---PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSA 233
Query: 121 LRMFRGLQKHGFV-PELVTYNI-----LIKGLCKAGRLRTARWILKELGDSGH-APNAIT 173
L + R +++ + P +V + + +I G C +GR A+ +L+E+ + +P+ +T
Sbjct: 234 LNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVT 293
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
Y ++ + K+ E+ M +G Y ++I F K RL A M
Sbjct: 294 YNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMA 353
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
T G DI+++NTLI YC+ +++ LL EM + G + T+T LI G C+ G++
Sbjct: 354 TKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLN 413
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME--------------- 338
A+ L+ M G N+ N ++D L +GK+ A+ +F++M+
Sbjct: 414 AAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGV 473
Query: 339 -----------------------------------VKDSFTYSSMVHNLCKAKRLPSASK 363
V D+ TY+S++H LCK RL A++
Sbjct: 474 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQ 533
Query: 364 LLLS 367
+ S
Sbjct: 534 MFDS 537
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 153/310 (49%), Gaps = 11/310 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID +C+ DA + M G SPD++T+N+LIAG R + + LL EM E G
Sbjct: 332 MIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAG 391
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ + +Y +L+H Q+G + A + Q+M+ + P T N +L+GLC N +AL
Sbjct: 392 LVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDAL 451
Query: 122 RMFRGLQK-----------HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
MF+ +QK +G P++ TYNILI GL G+ A + +E+ G P+
Sbjct: 452 EMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 511
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
ITY +++ + + ++ +M K ++ + + T+I + K GR+ + +
Sbjct: 512 TITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 571
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+M G+ + ++Y TLI+ + K G + A + EM G D T ++ GL
Sbjct: 572 EMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKE 631
Query: 291 NIKGARLHLE 300
+K A LE
Sbjct: 632 ELKRAVAMLE 641
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 177/391 (45%), Gaps = 15/391 (3%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P V+ + L+ R L + L +M +P + +S+ LM C K A
Sbjct: 76 PSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALST 135
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
F + P TF+ +L+GLC AL +F + K P +VT+ L+ GLC+
Sbjct: 136 FGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGLCR 191
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMK--CCFRNRKYKLGL----EILSAMKRKGY 202
GR+ A +L + + G PN ITY TI+ C + L L E +S +K
Sbjct: 192 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVV 251
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT-DGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ +I F GR EA +++M+ + D+V+YN LIN + KEGK A
Sbjct: 252 IWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAE 311
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
L DEM +G T++ +IDG CK + A M G ++ +N ++
Sbjct: 312 ELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGY 371
Query: 322 GKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
+ ++D I + M V ++ TY++++H C+ L +A LL + SGV
Sbjct: 372 CRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNV 431
Query: 378 SAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
++DGL +G ++A ++ ++ +K+
Sbjct: 432 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 462
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 91/181 (50%), Gaps = 1/181 (0%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G+ PDV TYN LI+G + +L +EM GI PD +YNS++H L + + DEA
Sbjct: 472 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEA 531
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
++F M +P TF ++NG CK D+ L +F + + G V +TY LI G
Sbjct: 532 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHG 591
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK-GYTF 204
K G + A I +E+ SG P+ IT ++ + + K + +L ++ GY
Sbjct: 592 FRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQMSVGYQL 651
Query: 205 D 205
+
Sbjct: 652 E 652
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 101/217 (46%), Gaps = 2/217 (0%)
Query: 194 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 253
L+ R G + G + + F +I L++A D MV ++ + L+ + +
Sbjct: 31 LAKKSRDGESGFGGESLKLRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVR 90
Query: 254 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
G+L+ L +ME + C+ Y+ TIL+ C + A + K+GF +
Sbjct: 91 MGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVT 150
Query: 314 YNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
++ ++ L + +I A+++F M + T++++++ LC+ R+ A LL L+ G+
Sbjct: 151 FSTLLHGLCVEDRISEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGL 210
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
+ + +VDG+ G A + K M ++SH
Sbjct: 211 QPNQITYGTIVDGMCKMGDTVSALNLLRK--MEEVSH 245
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 197/407 (48%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + +D + +M+ GI ++ T N L+ R S LS +L L +M+++G
Sbjct: 87 LLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLG 146
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ ++ SL++ + + +A +F M+ P +N +++GLCK++ DNAL
Sbjct: 147 HEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNAL 206
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++ G P+ VTYN LI GLC +GR A ++ + P+ T+ ++ C
Sbjct: 207 DLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDAC 266
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + E+ M R+ D Y +I RL EA MV+ G D+
Sbjct: 267 VKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDV 326
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y+ LIN YCK K+E L EM ++G + T+T+LI G C+AG + A ++
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKW 386
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G N+ YN ++ L +GKI+ A+ + M+ D TY+ ++ +CKA
Sbjct: 387 MVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGE 446
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A L S G+ A++ GL G R EA + K++
Sbjct: 447 VADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMK 493
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 147/305 (48%), Gaps = 35/305 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG---------ATR--------- 43
+ID C+ D +LNRM GI PD VTYNSLI+G ATR
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKRE 251
Query: 44 --------NSLLSCSL---------DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
N+L+ + +L +EM+ + PD+ +Y+ L++ L + DEA
Sbjct: 252 IYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
++F M+ P T++I++NG CK++ ++ +++F + + G V VTY +LI+G
Sbjct: 312 QMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGY 371
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C+AG+L A I K + G PN ITY ++ N K + L IL+ M++ G D
Sbjct: 372 CRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADI 431
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I K G + +A D + G+ DI +Y ++ K+G A L +
Sbjct: 432 VTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRK 491
Query: 267 MEKQG 271
M++ G
Sbjct: 492 MKEDG 496
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 166/344 (48%), Gaps = 4/344 (1%)
Query: 34 YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
Y ++ R L SLDL M++ P + ++ L+ + ++ K D +++ M
Sbjct: 49 YREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 94 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 153
+ T NI+LN C+ AL + K G P++VT+ L+ G C+ R+
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIY 168
Query: 154 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
A ++ + + G+ PN + Y TI+ ++++ L++L+ M+ G D Y ++I
Sbjct: 169 DALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLI 228
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ GR +AT + M + D+ ++N LI+ KEG++ A L +EM ++ +
Sbjct: 229 SGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLD 288
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
D T+++LI GLC + A +M G ++ Y+ +++ K K++H + +
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 334 FESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
F M V+++ TY+ ++ C+A +L A ++ + GV
Sbjct: 349 FCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGV 392
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 93/178 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C + D + M G PDVVTY+ LI G ++ + + L EM +
Sbjct: 296 LLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + +Y L+ + GK + A +F+ M+ + P T+N++L+GLC N + A
Sbjct: 356 GVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKA 415
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
L + +QK G ++VTYNI+I+G+CKAG + A + L G P+ TYT +M
Sbjct: 416 LVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMM 473
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ + G + M + G+ + VTY LI G R L+ + ++ M+
Sbjct: 331 ILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFC 390
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+PP++ +YN L+H L GK ++A + DM + T+NI++ G+CK +A
Sbjct: 391 GVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADA 450
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
++ L G P++ TY ++ GL K G A + +++ + G PN
Sbjct: 451 WDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 101/244 (41%), Gaps = 40/244 (16%)
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
R+ Y+ G Y ++ ++ +L ++ D MV I ++ L++ K K +
Sbjct: 40 RRAYS-GGSDYREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYD 98
Query: 259 AAYLLLDEMEKQGFECDKYTHTILI----------------------------------- 283
L ++M+ G + T IL+
Sbjct: 99 VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLL 158
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV---- 339
+G C+ I A + M ++G++ N+ YN I+D L K ++D+A+++ MEV
Sbjct: 159 NGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIR 218
Query: 340 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D+ TY+S++ LC + R A++++ K + A++D G EA+++
Sbjct: 219 PDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEEL 278
Query: 400 QSKI 403
++
Sbjct: 279 YEEM 282
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 186/391 (47%), Gaps = 6/391 (1%)
Query: 25 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM--LEMGIPPDVWSYNSLMHCLFQLGKP 82
AG PD +N ++ L +L +L M E PPD +SYN ++ L++ GK
Sbjct: 151 AGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKG 210
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
+A +VF +M+ + P T+N M++G K + R+ + G P +VTYN+L
Sbjct: 211 SDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVL 270
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
+ GLC+ GR+ R ++ E+ P+ TY+ + R + + L + + +KG
Sbjct: 271 LSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGV 330
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
+ ++ K G++ +A E +V G+ V YNTLIN YC+ L A+
Sbjct: 331 MLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFC 390
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
+ ++M+ + D T+ LI+GLCK + A + M K G D ++E +N ++D G
Sbjct: 391 IFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYG 450
Query: 323 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
G+++ V M+ K D ++ S+V CK ++P A +L + V
Sbjct: 451 TAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ 510
Query: 379 AQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+++D SG +A + K++ + +S
Sbjct: 511 VYNSIIDAYIESGDTEQALLLVEKMKNSGVS 541
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 179/361 (49%), Gaps = 4/361 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + M + G++P+ +TYN++I G + L L D+ML G P+V +YN L+ L
Sbjct: 216 VFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLC 275
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G+ DE + +M + P T++I+ +GL + + L +F K G +
Sbjct: 276 RTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAY 335
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T +IL+ GLCK G++ A+ + + L +G P + Y T++ + R + I M
Sbjct: 336 TCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM 395
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K + D Y +I K+ + +A D + +M GV + ++NTLI+ Y G+L
Sbjct: 396 KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQL 455
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
E + +L +M+++G + D + ++ CK G I A L+ M N + YN I
Sbjct: 456 EKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSI 515
Query: 318 VDRLGKDGKIDHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+D + G + A+ + E M+ V S TY+ ++ LC++ ++ A +L+ + G+
Sbjct: 516 IDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGL 575
Query: 374 R 374
R
Sbjct: 576 R 576
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 203/445 (45%), Gaps = 41/445 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID + + +AG+ + ++M G P+VVTYN L++G R + + L+DEM
Sbjct: 235 MIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHS 294
Query: 62 IPPDVWSYNSL------------MHCLF-----------------------QLGKPDEAN 86
+ PD ++Y+ L M LF + GK +A
Sbjct: 295 MLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAK 354
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+VF+ ++ L P T +N ++NG C+ R A +F ++ P+ +TYN LI GL
Sbjct: 355 QVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGL 414
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK + A ++ E+ SG P+ T+ T++ + + +LS M++KG D
Sbjct: 415 CKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDV 474
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ +V+ AF K G++ EA ++ M+ V + YN++I+ Y + G E A LL+++
Sbjct: 475 ISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEK 534
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+ G T+ +L+ GLC++ I A + + G ++ +YN I+ G
Sbjct: 535 MKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGD 594
Query: 327 IDHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
D A+ + + M ++ + T ++V L A R+ L L V S
Sbjct: 595 TDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGI 654
Query: 383 VVDGLRHSGCRREAKKIQSKIRMAK 407
+VD + C ++K K M++
Sbjct: 655 MVDA--YVRCENDSKVASLKKEMSE 677
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 165/383 (43%), Gaps = 35/383 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C+ D +++ M + PD TY+ L G TR L L E L+
Sbjct: 269 VLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKK 328
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA------------------ 102
G+ ++ + L++ L + GK +A +VF+ ++ L P T
Sbjct: 329 GVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGA 388
Query: 103 -----------------TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
T+N ++NGLCK A + ++K G P + T+N LI
Sbjct: 389 FCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDA 448
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
AG+L +L ++ G + I++ +++K +N K + IL M K +
Sbjct: 449 YGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPN 508
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y ++I A+++ G ++A +E+M GV IV+YN L+ C+ +++ A L+
Sbjct: 509 AQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIY 568
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+ QG D ++ +I C G+ A L+ MNK G L + +V L G
Sbjct: 569 TLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAG 628
Query: 326 KIDHAINVFESMEVKDSFTYSSM 348
++ +++ M K+ SS+
Sbjct: 629 RVHDMECLYQQMLHKNVEPSSSI 651
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 121/247 (48%), Gaps = 6/247 (2%)
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+P L + N+L++ L GR R L +G P+ + +++ C + L
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178
Query: 193 ILSAMKRK--GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+L M R D F Y VIA + G+ +A ++MV GV + ++YNT+I+
Sbjct: 179 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDG 238
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+ K G LEA + L D+M G + + T+ +L+ GLC+ G + R ++ M +
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPD 298
Query: 311 LEAYNCIVDRLGKDGKIDHAINVF-ESME---VKDSFTYSSMVHNLCKAKRLPSASKLLL 366
Y+ + D L + G+ +++F ES++ + ++T S +++ LCK ++ A ++
Sbjct: 299 GFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFE 358
Query: 367 SCLKSGV 373
+ +G+
Sbjct: 359 MLVHTGL 365
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ A+C+ IL+ M ++P+ YNS+I + +L L+++M G
Sbjct: 480 VVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSG 539
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ + +YN L+ L + + DEA + + L P ++N +++ C TD AL
Sbjct: 540 VSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKAL 599
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + K+G P L T + L+ L AGR+ + +++ P++ Y ++
Sbjct: 600 ELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAY 659
Query: 182 FRNRKYKLGLEILSAMKRKGYTFD 205
R + M KG FD
Sbjct: 660 VRCENDSKVASLKKEMSEKGIAFD 683
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 209/439 (47%), Gaps = 41/439 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC + ++++ ++ + G PD +T+N+LI G N + +L D +L +
Sbjct: 108 ILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLAL 167
Query: 61 GIPPDVWSYNSLMHCLFQLGKPD-----------------------------------EA 85
G D +SY +L++ L ++G+ +A
Sbjct: 168 GFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDA 227
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
++ MI ++P TF+ ++ G C + A +FR + P+ T+NIL+
Sbjct: 228 YELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDA 287
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTF 204
LCK G L+ A+ +L + G PN +TY+++M C N+ K +L+ + + G
Sbjct: 288 LCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNK-AKHVLNTISQMGAAP 346
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ YCT+I F KI + EA M G+ D V+YN+LI+ CK G++ A+ L+
Sbjct: 347 NAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELV 406
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
DEM G + +T+ LID LCK ++ A ++ + G ++ +N ++ L K
Sbjct: 407 DEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKV 466
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
G++ +A +VF+ + K +++TY+ MV+ LCK A LL +G+
Sbjct: 467 GRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTY 526
Query: 381 KAVVDGLRHSGCRREAKKI 399
+ ++ L H +A+K+
Sbjct: 527 ETLIQALFHKDENEKAEKL 545
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 191/368 (51%), Gaps = 4/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ +L ++ + +VV YN++I ++ L+ + +L +M+
Sbjct: 179 LINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKK 238
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV ++++L++ +G+ +EA +F++M+ ++ P TFNI+++ LCK A
Sbjct: 239 ISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAK 298
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + K G +P +VTY+ L+ G C ++ A+ +L + G APNA +Y T++
Sbjct: 299 NMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGF 358
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + L + + M+ KG D Y ++I K GR+ A + +++M +G +I
Sbjct: 359 CKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANI 418
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN LI+ CK ++ A L+ +++ QG + D YT ILI GLCK G +K A+ +
Sbjct: 419 FTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQD 478
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G+ N YN +V+ L K+G D A + M+ + D+ TY +++ L
Sbjct: 479 LLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDE 538
Query: 358 LPSASKLL 365
A KLL
Sbjct: 539 NEKAEKLL 546
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 179/372 (48%), Gaps = 12/372 (3%)
Query: 6 YCQF------VSFDAGYTILNRMREAGISPDVVTYNSLIAGATR--NSLLSCSLDLLDEM 57
Y QF + D + N + + ++ +N ++ + N+ ++ L +
Sbjct: 35 YSQFQFVPSNIDVDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRL 94
Query: 58 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
GI PD++++N L++C + + + A + ++ P T TFN ++ GLC N
Sbjct: 95 EFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKV 154
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
AL + GF + +Y LI GLCK G RTA +L+++ N + Y TI
Sbjct: 155 KEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTI 214
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ +++ E+ S M K + D + +I F +G+L+EA +MV +
Sbjct: 215 IDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNI 274
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
D ++N L++ CKEG L+ A +L M K+G + T++ L+DG C + A+
Sbjct: 275 NPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKH 334
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 353
L ++++G N +Y +++ K +D A+++F M+ K D TY+S++ LC
Sbjct: 335 VLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLC 394
Query: 354 KAKRLPSASKLL 365
K+ R+ A +L+
Sbjct: 395 KSGRISYAWELV 406
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 120/236 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D YC + +LN + + G +P+ +Y ++I G + ++ +L L ++M G
Sbjct: 319 LMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKG 378
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD +YNSL+ L + G+ A + +M T+N +++ LCKN + D A+
Sbjct: 379 IAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAI 438
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + ++ G P++ T+NILI GLCK GRL+ A+ + ++L G++ NA TY ++
Sbjct: 439 ALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGL 498
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + +LS M G D Y T+I A ++A + +M+ V
Sbjct: 499 CKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDV 554
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 31/174 (17%)
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G+ DI ++N LIN YC ++ A+ ++ ++ K G+E D T LI GLC G +K A
Sbjct: 98 GITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEA 157
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA 355
+++ +GF D F+Y ++++ LCK
Sbjct: 158 LHFHDHVLALGFHL-------------------------------DQFSYGTLINGLCKI 186
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+A ++L V+I ++D L +A ++ S++ KIS
Sbjct: 187 GETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKIS 240
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 35/132 (26%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATR-----------NSLLS-- 48
LIDA C+ D ++ ++++ GI PD+ T+N LI G + LLS
Sbjct: 424 LIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKG 483
Query: 49 ---------------CSLDLLDE-------MLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
C L DE M + GI PD +Y +L+ LF + ++A
Sbjct: 484 YSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAE 543
Query: 87 RVFQDMICGDLT 98
++ ++MI D+
Sbjct: 544 KLLREMIARDVV 555
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 193/403 (47%), Gaps = 8/403 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ +L+ M G+ P V TYN++I G ++ L +L + M
Sbjct: 293 LLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGN 352
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD W+YNSL+H L GKPDEA + I +P TF ++NG CK D+A
Sbjct: 353 GCNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDA 411
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
LR+ + +L Y +LI L K RL+ A+ L E+ +G +PN + YT+I+
Sbjct: 412 LRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDA 471
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K LE+ + +G + + Y ++I ++ +L +A + +M DG+
Sbjct: 472 YCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPG 531
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++Y TLI CK+ + + A+ L + ME+ G D+ + +L D LCK+G + A
Sbjct: 532 VITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA---YS 588
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
++ K G Y +VD K G + A + E M + DS TYS ++ LCK K
Sbjct: 589 FLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQK 648
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+L A +L GV+ A ++ + G AK +
Sbjct: 649 KLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSM 691
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 178/385 (46%), Gaps = 25/385 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+IDAYC+ A + G P+ TY+SLI G ++ L ++ L+ +M E G
Sbjct: 468 IIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDG 527
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P V +Y +L+ + + D A R+F+ M LTP +N++ + LCK+ + A
Sbjct: 528 ITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA- 586
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L K G V VTY L+ G KAG A +++++ + G ++ TY+ +++
Sbjct: 587 --YSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQAL 644
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +K L IL M +G + Y +I+ +K G+ A +M++ G +
Sbjct: 645 CKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSA 704
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y I+ YCK G++E A L+ EME+ G D T+ + I+G G + A L+
Sbjct: 705 ITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKR 764
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDG----------------KIDHAINVFESMEVKD---- 341
M + N Y ++ K K+D + E M VK
Sbjct: 765 MIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERM-VKHGLNP 823
Query: 342 -SFTYSSMVHNLCKAKRLPSASKLL 365
+ TYSS++ CKA RL A LL
Sbjct: 824 TAVTYSSIIAGFCKATRLEEACVLL 848
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 186/428 (43%), Gaps = 41/428 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I AYC+ S + +RE+G+ D T N+L+ G R L + LL M MG
Sbjct: 189 MIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMG 248
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ +SY L+ L + EA + M+ +P T+ +++ GLCK +A
Sbjct: 249 CRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDAR 308
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA---------------RWILKELGDS- 165
+ + + G VP + TYN +I G CK+GRL+ A W L
Sbjct: 309 VLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGL 368
Query: 166 ------------------GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
G +P IT+T I+ + K L + S M D
Sbjct: 369 CGGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQ 428
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y +I+ +K RLKEA D + ++ +G+ ++V Y ++I+ YCK GK+ AA +
Sbjct: 429 AYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLT 488
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
E +G + +T++ LI GL + + A + M + G + Y ++ K +
Sbjct: 489 EHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEF 548
Query: 328 DHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
D+A +FE ME D Y+ + LCK+ R A L +K GV + K ++
Sbjct: 549 DNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VKKGVVLTKVTYTSL 605
Query: 384 VDGLRHSG 391
VDG +G
Sbjct: 606 VDGFSKAG 613
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 174/360 (48%), Gaps = 5/360 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ +++ + G+ PD VTYN++I + L+ + + E G+ D ++ N+L+
Sbjct: 170 LYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYC 229
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G +A + M ++ I++ GLC+ R AL + + + G P L
Sbjct: 230 RTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLH 289
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY +LI+GLCK GR+ AR +L E+ G P+ TY ++ ++ + K L I + M
Sbjct: 290 TYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLM 349
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ G D + Y ++I G+ EA + + + G ++++ +IN YCK K+
Sbjct: 350 EGNGCNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKI 408
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A + M + D + +LI L K +K A+ L + G N+ Y I
Sbjct: 409 DDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSI 468
Query: 318 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+D K GK+ A+ VF+ E + +++TYSS+++ L + ++L A L+ + G+
Sbjct: 469 IDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGI 528
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 152/333 (45%), Gaps = 19/333 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D + + + + ++ +M G D TY+ L+ + L+ +L +LD+M G
Sbjct: 605 LVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRG 664
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ ++ +Y ++ + + GK D A +F +MI P T+ + ++ CK + A
Sbjct: 665 VKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAG 724
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++++G P++VTYN+ I G G + A LK + D+ PN TY ++K
Sbjct: 725 HLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLK-- 782
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
L + D G I +L +E+MV G+
Sbjct: 783 ----------HFLKMSLANAHYVDTSGMWNWI-------KLDTVWQLLERMVKHGLNPTA 825
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y+++I +CK +LE A +LLD M + ++ +T+LI C + A +
Sbjct: 826 VTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTN 885
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
M + GF +LE+Y+ ++ L +G D A +F
Sbjct: 886 MIECGFQPHLESYHYLITGLCDEGDYDKAKALF 918
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 148/355 (41%), Gaps = 21/355 (5%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
YN + L + + +++ ++ L P T T+N M+ CK A R FR L+
Sbjct: 151 YNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLR 210
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
+ G + T N L+ G C+ G LR A W+L + G N +YT +++ R +
Sbjct: 211 ESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVR 270
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
L +L M + G + + Y +I K GR+ +A +++M GV + +YN +I
Sbjct: 271 EALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMI 330
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
+ YCK G+L+ A + ME G D +T+ LI GLC G A L GF
Sbjct: 331 DGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFS 389
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
+ + I++ K KID A+ V M D Y ++ L K RL A
Sbjct: 390 PTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDT 449
Query: 365 LLSCLKSGVRILKSAQKAVVDG----------------LRHSGCRREAKKIQSKI 403
L +G+ +++D H GCR A S I
Sbjct: 450 LNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLI 504
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 154/359 (42%), Gaps = 23/359 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ A C+ + +IL++M G+ ++V Y +I+ + + + +EM+
Sbjct: 639 VLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISS 698
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +Y + ++G+ +EA + +M + P T+N+ +NG Y D A
Sbjct: 699 GHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCA 758
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + P TY +L+K K L A ++ D+ N I T+
Sbjct: 759 FSTLKRMIDASCEPNYWTYWLLLKHFLKMS-LANAHYV-----DTSGMWNWIKLDTVW-- 810
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++L M + G Y ++IA F K RL+EA ++ M+ + +
Sbjct: 811 -----------QLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPN 859
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
Y LI C E A + M + GF+ ++ LI GLC G+ A+
Sbjct: 860 EEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFC 919
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ ++ ++ N A+ + D L K G +D + +ME + DS TYS + +N+ +A
Sbjct: 920 DLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETYSMVTNNIHEA 978
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 198/397 (49%), Gaps = 4/397 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
FD + ++M GIS D+ ++ LI R S LS +L LL +M+++G P + + S
Sbjct: 95 FDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGS 154
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
L++ Q + EA + M P +N ++NGLCKNR +NAL +F ++K G
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
+ VTYN LI GL +GR A +L+++ PN I +T ++ +
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+ M R+ + F Y ++I F G L +A + MV+ G D+V+YNTLI +
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
CK ++E L EM QG D +T+ LI G C+AG + A+ M G ++
Sbjct: 335 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 394
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLS 367
YN ++D L +GKI+ A+ + E ++ D TY+ ++ LC+ +L A L S
Sbjct: 395 VTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRS 454
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ GV+ A ++ GL G +REA K+ +++
Sbjct: 455 LTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 491
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 180/350 (51%), Gaps = 1/350 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ +CQ F ++++ M G P+VV YN++I G +N L+ +L++ M + G
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I D +YN+L+ L G+ +A R+ +DM+ + P F +++ K A
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + + VP + TYN LI G C G L A+++ + G P+ +TY T++
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++++ + G+++ M +G D F Y T+I + + G+L A +MV GV DI
Sbjct: 335 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 394
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN L++ C GK+E A +++++++K + D T+ I+I GLC+ +K A
Sbjct: 395 VTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRS 454
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHN 351
+ + G + AY ++ L + G A + M+ +D F S +++
Sbjct: 455 LTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK-EDGFMPSERIYD 503
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 4/195 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ + G + M G+ D TYN+LI G + L+ + + + M++ G
Sbjct: 330 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ +YN L+ CL GK ++A + +D+ ++ T+NI++ GLC+ A
Sbjct: 390 VSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAW 449
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR L + G P+ + Y +I GLC+ G R A + + + + G P+ Y +
Sbjct: 450 CLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL--- 506
Query: 182 FRNRKYKLGLEILSA 196
R+ L E++ A
Sbjct: 507 -RDHYTSLSAELIKA 520
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 81/172 (47%), Gaps = 4/172 (2%)
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV + ++ + K K + L +ME G D Y+ TILI C+ + A L
Sbjct: 79 IVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLG 138
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M K+GF ++ +++ + + A+++ +SM+ V + Y+++++ LCK +
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
L +A ++ K G+R ++ GL +SG +A ++ + KI
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKI 250
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 198/397 (49%), Gaps = 4/397 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
FD + ++M GIS D+ ++ LI R S LS +L LL +M+++G P + + S
Sbjct: 620 FDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGS 679
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
L++ Q + EA + M P +N ++NGLCKNR +NAL +F ++K G
Sbjct: 680 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 739
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
+ VTYN LI GL +GR A +L+++ PN I +T ++ +
Sbjct: 740 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 799
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+ M R+ + F Y ++I F G L +A + MV+ G D+V+YNTLI +
Sbjct: 800 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 859
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
CK ++E L EM QG D +T+ LI G C+AG + A+ M G ++
Sbjct: 860 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 919
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLS 367
YN ++D L +GKI+ A+ + E ++ D TY+ ++ LC+ +L A L S
Sbjct: 920 VTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRS 979
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ GV+ A ++ GL G +REA K+ +++
Sbjct: 980 LTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 1016
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 180/350 (51%), Gaps = 1/350 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ +CQ F ++++ M G P+VV YN++I G +N L+ +L++ M + G
Sbjct: 680 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 739
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I D +YN+L+ L G+ +A R+ +DM+ + P F +++ K A
Sbjct: 740 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 799
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + + VP + TYN LI G C G L A+++ + G P+ +TY T++
Sbjct: 800 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 859
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++++ + G+++ M +G D F Y T+I + + G+L A +MV GV DI
Sbjct: 860 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 919
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN L++ C GK+E A +++++++K + D T+ I+I GLC+ +K A
Sbjct: 920 VTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRS 979
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHN 351
+ + G + AY ++ L + G A + M+ +D F S +++
Sbjct: 980 LTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK-EDGFMPSERIYD 1028
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 191/389 (49%), Gaps = 4/389 (1%)
Query: 20 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 79
+M GIS D+ ++ LI R S LS +L +L +M+++G P + ++ SL+H +
Sbjct: 95 QKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
+ +A + M+ P +N +++GLCKN + AL + ++K G ++VTY
Sbjct: 155 NRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
N L+ GLC +GR A +L+++ P+ +T+T ++ + E+ M +
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
+ Y ++I GRL +A + M + G ++V+YNTLI+ +CK ++
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
L M +GF D +T+ LI G C+ G ++ A +M ++ + ++
Sbjct: 335 GMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394
Query: 320 RLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
L +G+I+ A+ F+ M + + Y+ M+H LCKA ++ A +L GV+
Sbjct: 395 GLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKP 454
Query: 376 LKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++ GL +G RREA ++ +++
Sbjct: 455 DARTYTIMILGLCKNGPRREADELIRRMK 483
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 192/400 (48%), Gaps = 8/400 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C+ ++L +M + G P +VT+ SL+ G + + + L+ M++
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V YN+L+ L + G+ + A + +M L T+N +L GLC + +A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK- 179
RM R + K P++VT+ LI K G L A+ + KE+ S PN +TY +I+
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
C R Y + M KG + Y T+I+ F K + E ++M +G
Sbjct: 291 LCMHGRLYD-AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DI +YNTLI+ YC+ GKL A + M + D TH IL+ GLC G I+ A +
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF 409
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ M + + AYN ++ L K K++ A +F + V+ D+ TY+ M+ LCK
Sbjct: 410 DDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN 469
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
A +L+ + G+ +A+ ++ HS +E
Sbjct: 470 GPRREADELIRRMKEEGIICQMNAEDDHLE--EHSSSNKE 507
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 4/195 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ + G + M G+ D TYN+LI G + L+ + + + M++ G
Sbjct: 855 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 914
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ +YN L+ CL GK ++A + +D+ ++ T+NI++ GLC+ A
Sbjct: 915 VSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAW 974
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR L + G P+ + Y +I GLC+ G R A + + + + G P+ Y +
Sbjct: 975 CLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL--- 1031
Query: 182 FRNRKYKLGLEILSA 196
R+ L E++ A
Sbjct: 1032 -RDHYTSLSAELIKA 1045
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 97/460 (21%), Positives = 190/460 (41%), Gaps = 59/460 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+F D G + RM G + D+ TYN+LI G + L +LD+ M+
Sbjct: 322 LISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381
Query: 62 IPPDVWS-----------------------------------YNSLMHCLFQLGKPDEAN 86
+ PD+ + YN ++H L + K ++A
Sbjct: 382 VTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAW 441
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+F + + P T+ IM+ GLCKN A + R +++ G + ++ + ++
Sbjct: 442 ELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEH 501
Query: 147 CKAGRLRTARWILKELGDSGHAPN-------AITYTTIMKCCFRNRKYKL---GLEILSA 196
+ + L+E+ + + I +++ +K F R Y L G ++
Sbjct: 502 SSSNK--EISLSLREIWERSKSNPFWMQRLIPIAFSSSVKG-FVRRHYLLLERGNNPETS 558
Query: 197 MKRKGYTFDGFG----YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ R +F G Y + + + +A +M+ IV + ++ +
Sbjct: 559 LSR---SFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIA 615
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K K + L +ME G D Y+ TILI C+ + A L M K+GF ++
Sbjct: 616 KMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIV 675
Query: 313 AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
+++ + + A+++ +SM+ V + Y+++++ LCK + L +A ++
Sbjct: 676 TLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM 735
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
K G+R ++ GL +SG +A ++ + KI
Sbjct: 736 EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKI 775
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 4/258 (1%)
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
G + R A + E+ S P+ + +T ++ R+Y+ + M+ G +
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D + + +I F + RL A + +M+ G + IV++ +L++ +C ++ A+ L+
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
M K G+E + + LIDGLCK G + A L M K G +++ YN ++ L
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
G+ A + M + D T+++++ K L A +L ++S V
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 381 KAVVDGLRHSGCRREAKK 398
++++GL G +AKK
Sbjct: 285 NSIINGLCMHGRLYDAKK 302
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 215/477 (45%), Gaps = 74/477 (15%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+A C+ + + L+ M E G+ PDVVTYN+LI R LL + +L+D M
Sbjct: 102 IMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGK 161
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC-------- 112
G+ P V++YN++++ L + GK A V +M+ ++P TAT+NI+L C
Sbjct: 162 GLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDA 221
Query: 113 ---------------------------KNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
KN D AL+ FR ++ G P+ V Y ILI G
Sbjct: 222 ERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGG 281
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
C+ G + A + E+ + G + +TY TI+ + + E+ + M +G D
Sbjct: 282 FCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPD 341
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE------- 258
+ + T+I + K G + +A E M+ ++ D+V+YNTLI+ +CK ++E
Sbjct: 342 FYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWN 401
Query: 259 ----------------------------AAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
A+ L DEM ++GFE T ++ G C+AG
Sbjct: 402 DMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAG 461
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 346
N A L M G + YN +++ K+ +D A + ME + D TY+
Sbjct: 462 NAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYN 521
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+++ + R+ A ++L ++ GV +S ++++G +EA ++ ++
Sbjct: 522 VILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEM 578
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 183/400 (45%), Gaps = 4/400 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D + I + +G+ +V T N +I +N + + L +M E G+ PDV +YN+L
Sbjct: 79 DLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTL 138
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
++ + G +EA + M L PC T+N ++NGLCK A + + K G
Sbjct: 139 INAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGM 198
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P+ TYNIL+ C+ + A I E+ G P+ ++++ ++ +N L+
Sbjct: 199 SPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALK 258
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
MK G D Y +I F + G + EA ++M+ G LD+V+YNT++N C
Sbjct: 259 YFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLC 318
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
KE L A L EM ++G D YT T LI+G K GN+ A E M + ++
Sbjct: 319 KEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVV 378
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 368
YN ++D K +++ ++ M + + +Y +++ C + A +L
Sbjct: 379 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 438
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
++ G +V G +G +A + S + + I
Sbjct: 439 VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGI 478
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 181/407 (44%), Gaps = 4/407 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ Y Q G ++ G+ + NSL+ G + + + ++ E++
Sbjct: 32 LLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRS 91
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ +V++ N +++ L + K + DM + P T+N ++N C+ + A
Sbjct: 92 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 151
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P + TYN +I GLCK G+ A+ +L E+ G +P+ TY ++
Sbjct: 152 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE 211
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C RN I M +G D + +I K G L +A Y M G+ D
Sbjct: 212 CCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD 271
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V Y LI +C+ G + A + DEM +QG D T+ +++GLCK + A
Sbjct: 272 NVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFT 331
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + G + + +++ KDG ++ A+ +FE M + D TY++++ CK
Sbjct: 332 EMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGS 391
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ ++L + + + +++G + GC EA ++ ++
Sbjct: 392 EMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 438
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 160/308 (51%), Gaps = 2/308 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C+ + + M E G DVVTYN+++ G + +LS + +L EM E
Sbjct: 277 ILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTER 336
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD +++ +L++ + G ++A +F+ MI +L P T+N +++G CK +
Sbjct: 337 GVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKV 396
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + P ++Y ILI G C G + A + E+ + G IT TI+K
Sbjct: 397 NELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 456
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R E LS M KG DG Y T+I F+K + A + +M G+ D
Sbjct: 457 YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 516
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
+++YN ++N + ++G+++ A L++ +M ++G D+ T+T LI+G N+K A R+H
Sbjct: 517 VITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHD 576
Query: 300 EYMNKIGF 307
E + + GF
Sbjct: 577 EMLQR-GF 583
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 139/274 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ + M E G+ PD T+ +LI G +++ ++ ++ L + M++
Sbjct: 313 ILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRN 372
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +YN+L+ + + ++ N ++ DMI + P ++ I++NG C A
Sbjct: 373 LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAF 432
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R++ + + GF ++T N ++KG C+AG A L + G P+ ITY T++
Sbjct: 433 RLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGF 492
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +++ M+ G D Y ++ F + GR++EA M +M+ GV D
Sbjct: 493 IKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDR 552
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
+Y +LIN + + L+ A+ + DEM ++GF D
Sbjct: 553 STYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 142/305 (46%), Gaps = 4/305 (1%)
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
F++++ + R FR L+ G + N L+ GL K G + A I +E+
Sbjct: 29 VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEV 88
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
SG N T ++ +N+K + LS M+ KG D Y T+I A+ + G L
Sbjct: 89 VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLL 148
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
+EA + M+ M G++ + +YN +IN CK GK A +LDEM K G D T+ IL
Sbjct: 149 EEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNIL 208
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 338
+ C+ N+ A + M G +L +++ ++ L K+G +D A+ F M+
Sbjct: 209 LVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGL 268
Query: 339 VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
D+ Y+ ++ C+ + A K+ L+ G + +++GL EA +
Sbjct: 269 APDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADE 328
Query: 399 IQSKI 403
+ +++
Sbjct: 329 LFTEM 333
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 2/171 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC + + + M E G ++T N+++ G R + + L ML
Sbjct: 417 ILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLK 476
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN-RYTDN 119
GI PD +YN+L++ + D A + M L P T+N++LNG + R +
Sbjct: 477 GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 536
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
L M + +++ G P+ TY LI G L+ A + E+ G P+
Sbjct: 537 ELIMLKMIER-GVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 186/365 (50%), Gaps = 6/365 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANR 87
P+ VTYN++IAG + +LD++ EM E G I P+ ++Y +++ ++G+ DEA +
Sbjct: 70 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 129
Query: 88 VFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
VF +M+ G++ P +N ++ G C D AL + + G + TYN+L+ L
Sbjct: 130 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 189
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
GR A +++E+G G AP+ TY ++ + K LEI M R+G
Sbjct: 190 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 249
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y ++I A K G+++E ++ V G++ D+V YN LIN + G ++ A+ ++ E
Sbjct: 250 VTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 309
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
MEK+ D T+ L+ GLC G + AR ++ M K G +L YN ++ G
Sbjct: 310 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGD 369
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+ A+ + M K TY++++ LCK + A ++ +++G+ S +
Sbjct: 370 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 429
Query: 383 VVDGL 387
+++GL
Sbjct: 430 LIEGL 434
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 156/321 (48%), Gaps = 1/321 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+I +C+ D + + M G + P+ V YN+LI G L +L D M+E
Sbjct: 114 VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVER 173
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ V +YN L+H LF G+ EA + ++M L P T+NI++NG CK A
Sbjct: 174 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 233
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F + + G +VTY LI L K G+++ + E G P+ + Y ++
Sbjct: 234 LEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 293
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ EI+ M++K D Y T++ +GR+ EA +++M G+Q D
Sbjct: 294 HSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPD 353
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YNTLI+ Y +G ++ A + +EM +GF T+ LI GLCK G A ++
Sbjct: 354 LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK 413
Query: 301 YMNKIGFDSNLEAYNCIVDRL 321
M + G + Y +++ L
Sbjct: 414 EMVENGITPDDSTYISLIEGL 434
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 175/359 (48%), Gaps = 8/359 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMRE-AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+I +C A I+ MRE GI+P+ TY ++I+G + + ++ + DEML
Sbjct: 78 VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTK 137
Query: 61 G-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G + P+ YN+L+ GK D A M+ + AT+N++++ L +
Sbjct: 138 GEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE 197
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + + G P++ TYNILI G CK G ++ A I + + G +TYT+++
Sbjct: 198 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIY 257
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + + ++ R+G D Y +I + G + A + M +M +
Sbjct: 258 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 317
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLH 298
D V+YNTL+ C G+++ A L+DEM K+G + D T+ LI G G++K A R+
Sbjct: 318 DDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIR 377
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 353
E MNK GF+ L YN ++ L K+G+ D A N+ + M D TY S++ L
Sbjct: 378 NEMMNK-GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 435
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 168/372 (45%), Gaps = 45/372 (12%)
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+H L A +F DM L CT TFNIML LC AL + R + +
Sbjct: 13 LHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR--- 69
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGL 191
P VTYN +I G C GR++ A I++E+ + G APN TY T++ + + +
Sbjct: 70 -PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 128
Query: 192 EILSAMKRKGYT-FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
++ M KG + Y +I + G+L A Y ++MV GV + + +YN L++
Sbjct: 129 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 188
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG---- 306
+G+ AY L++EM +G D +T+ ILI+G CK GN+K A E M++ G
Sbjct: 189 LFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRAT 248
Query: 307 -----------------------FDS--------NLEAYNCIVDRLGKDGKIDHAINVFE 335
FD +L YN +++ G ID A +
Sbjct: 249 VVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG 308
Query: 336 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
ME K D TY++++ LC R+ A KL+ K G++ ++ G G
Sbjct: 309 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKG 368
Query: 392 CRREAKKIQSKI 403
++A +I++++
Sbjct: 369 DVKDALRIRNEM 380
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 145/280 (51%), Gaps = 12/280 (4%)
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILS 195
T+NI+++ LC AG+ A +L+++ PNA+TY T++ C R R + L+I+
Sbjct: 42 TTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGR-VQAALDIMR 96
Query: 196 AMK-RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG-VQLDIVSYNTLINLYCK 253
M+ R G + + Y TVI+ + K+GR+ EA ++M+T G V+ + V YN LI YC
Sbjct: 97 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 156
Query: 254 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
+GKL+ A L D M ++G T+ +L+ L G A +E M G ++
Sbjct: 157 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 216
Query: 314 YNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 369
YN +++ K+G + A+ +FE+M + TY+S+++ L K ++ KL +
Sbjct: 217 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAV 276
Query: 370 KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+ G+R A+++ SG A +I ++ +I+
Sbjct: 277 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 316
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ + I M G+ VVTY SLI ++ + + L DE +
Sbjct: 219 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR 278
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD+ YN+L++ G D A + +M + P T+N ++ GLC D A
Sbjct: 279 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 338
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + K G P+LVTYN LI G G ++ A I E+ + G P +TY +++
Sbjct: 339 RKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 398
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 217
+N + ++ M G T D Y ++I
Sbjct: 399 LCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 435
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/477 (25%), Positives = 215/477 (45%), Gaps = 74/477 (15%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+A C+ + + L+ M E G+ PDVVTYN+LI R LL + +L+D M
Sbjct: 259 IMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGK 318
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT--- 117
G+ P V++YN++++ L + GK A V +M+ ++P TAT+NI+L C+N
Sbjct: 319 GLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDA 378
Query: 118 --------------------------------DNALRMFRGLQKHGFVPELVTYNILIKG 145
D AL+ FR ++ G P+ V Y ILI G
Sbjct: 379 ERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGG 438
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
C+ G + A + E+ + G + +TY TI+ + + E+ + M +G D
Sbjct: 439 FCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPD 498
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE------- 258
+ + T+I + K G + +A E M+ ++ D+V+YNTLI+ +CK ++E
Sbjct: 499 FYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWN 558
Query: 259 ----------------------------AAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
A+ L DEM ++GFE T ++ G C+AG
Sbjct: 559 DMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAG 618
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 346
N A L M G + YN +++ K+ +D A + ME + D TY+
Sbjct: 619 NAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYN 678
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+++ + R+ A ++L ++ GV +S ++++G +EA ++ ++
Sbjct: 679 VILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEM 735
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 183/400 (45%), Gaps = 4/400 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D + I + +G+ +V T N +I +N + + L +M E G+ PDV +YN+L
Sbjct: 236 DLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTL 295
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
++ + G +EA + M L PC T+N ++NGLCK A + + K G
Sbjct: 296 INAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGM 355
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P+ TYNIL+ C+ + A I E+ G P+ ++++ ++ +N L+
Sbjct: 356 SPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALK 415
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
MK G D Y +I F + G + EA ++M+ G LD+V+YNT++N C
Sbjct: 416 YFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLC 475
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
KE L A L EM ++G D YT T LI+G K GN+ A E M + ++
Sbjct: 476 KEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVV 535
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 368
YN ++D K +++ ++ M + + +Y +++ C + A +L
Sbjct: 536 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 595
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
++ G +V G +G +A + S + + I
Sbjct: 596 VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGI 635
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 181/407 (44%), Gaps = 4/407 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ Y Q G ++ G+ + NSL+ G + + + ++ E++
Sbjct: 189 LLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRS 248
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ +V++ N +++ L + K + DM + P T+N ++N C+ + A
Sbjct: 249 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 308
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P + TYN +I GLCK G+ A+ +L E+ G +P+ TY ++
Sbjct: 309 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE 368
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C RN I M +G D + +I K G L +A Y M G+ D
Sbjct: 369 CCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD 428
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V Y LI +C+ G + A + DEM +QG D T+ +++GLCK + A
Sbjct: 429 NVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFT 488
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + G + + +++ KDG ++ A+ +FE M + D TY++++ CK
Sbjct: 489 EMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGS 548
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ ++L + + + +++G + GC EA ++ ++
Sbjct: 549 EMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 595
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 160/308 (51%), Gaps = 2/308 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C+ + + M E G DVVTYN+++ G + +LS + +L EM E
Sbjct: 434 ILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTER 493
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD +++ +L++ + G ++A +F+ MI +L P T+N +++G CK +
Sbjct: 494 GVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKV 553
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + P ++Y ILI G C G + A + E+ + G IT TI+K
Sbjct: 554 NELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 613
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R E LS M KG DG Y T+I F+K + A + +M G+ D
Sbjct: 614 YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 673
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
+++YN ++N + ++G+++ A L++ +M ++G D+ T+T LI+G N+K A R+H
Sbjct: 674 VITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHD 733
Query: 300 EYMNKIGF 307
E + + GF
Sbjct: 734 EMLQR-GF 740
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 139/274 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ + M E G+ PD T+ +LI G +++ ++ ++ L + M++
Sbjct: 470 ILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRN 529
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +YN+L+ + + ++ N ++ DMI + P ++ I++NG C A
Sbjct: 530 LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAF 589
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R++ + + GF ++T N ++KG C+AG A L + G P+ ITY T++
Sbjct: 590 RLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGF 649
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +++ M+ G D Y ++ F + GR++EA M +M+ GV D
Sbjct: 650 IKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDR 709
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
+Y +LIN + + L+ A+ + DEM ++GF D
Sbjct: 710 STYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 142/304 (46%), Gaps = 4/304 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F++++ + R FR L+ G + N L+ GL K G + A I +E+
Sbjct: 187 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 246
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
SG N T ++ +N+K + LS M+ KG D Y T+I A+ + G L+
Sbjct: 247 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 306
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
EA + M+ M G++ + +YN +IN CK GK A +LDEM K G D T+ IL+
Sbjct: 307 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 366
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----V 339
C+ N+ A + M G +L +++ ++ L K+G +D A+ F M+
Sbjct: 367 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLA 426
Query: 340 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D+ Y+ ++ C+ + A K+ L+ G + +++GL EA ++
Sbjct: 427 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADEL 486
Query: 400 QSKI 403
+++
Sbjct: 487 FTEM 490
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 2/171 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC + + + M E G ++T N+++ G R + + L ML
Sbjct: 574 ILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLK 633
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN-RYTDN 119
GI PD +YN+L++ + D A + M L P T+N++LNG + R +
Sbjct: 634 GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 693
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
L M + +++ G P+ TY LI G L+ A + E+ G P+
Sbjct: 694 ELIMLKMIER-GVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 215/477 (45%), Gaps = 74/477 (15%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+A C+ + + L+ M E G+ PDVVTYN+LI R LL + +L+D M
Sbjct: 363 IMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGK 422
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC-------- 112
G+ P V++YN++++ L + GK A V +M+ ++P TAT+NI+L C
Sbjct: 423 GLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDA 482
Query: 113 ---------------------------KNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
KN D AL+ FR ++ G P+ V Y ILI G
Sbjct: 483 ERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGG 542
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
C+ G + A + E+ + G + +TY TI+ + + E+ + M +G D
Sbjct: 543 FCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPD 602
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE------- 258
+ + T+I + K G + +A E M+ ++ D+V+YNTLI+ +CK ++E
Sbjct: 603 FYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWN 662
Query: 259 ----------------------------AAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
A+ L DEM ++GFE T ++ G C+AG
Sbjct: 663 DMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAG 722
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 346
N A L M G + YN +++ K+ +D A + ME + D TY+
Sbjct: 723 NAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYN 782
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+++ + R+ A ++L ++ GV +S ++++G +EA ++ ++
Sbjct: 783 VILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEM 839
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 183/400 (45%), Gaps = 4/400 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D + I + +G+ +V T N +I +N + + L +M E G+ PDV +YN+L
Sbjct: 340 DLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTL 399
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
++ + G +EA + M L PC T+N ++NGLCK A + + K G
Sbjct: 400 INAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGM 459
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P+ TYNIL+ C+ + A I E+ G P+ ++++ ++ +N L+
Sbjct: 460 SPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALK 519
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
MK G D Y +I F + G + EA ++M+ G LD+V+YNT++N C
Sbjct: 520 YFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLC 579
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
KE L A L EM ++G D YT T LI+G K GN+ A E M + ++
Sbjct: 580 KEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVV 639
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 368
YN ++D K +++ ++ M + + +Y +++ C + A +L
Sbjct: 640 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 699
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
++ G +V G +G +A + S + + I
Sbjct: 700 VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGI 739
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 181/407 (44%), Gaps = 4/407 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ Y Q G ++ G+ + NSL+ G + + + ++ E++
Sbjct: 293 LLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRS 352
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ +V++ N +++ L + K + DM + P T+N ++N C+ + A
Sbjct: 353 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 412
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P + TYN +I GLCK G+ A+ +L E+ G +P+ TY ++
Sbjct: 413 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE 472
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C RN I M +G D + +I K G L +A Y M G+ D
Sbjct: 473 CCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD 532
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V Y LI +C+ G + A + DEM +QG D T+ +++GLCK + A
Sbjct: 533 NVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFT 592
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + G + + +++ KDG ++ A+ +FE M + D TY++++ CK
Sbjct: 593 EMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGS 652
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ ++L + + + +++G + GC EA ++ ++
Sbjct: 653 EMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 699
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 160/308 (51%), Gaps = 2/308 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C+ + + M E G DVVTYN+++ G + +LS + +L EM E
Sbjct: 538 ILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTER 597
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD +++ +L++ + G ++A +F+ MI +L P T+N +++G CK +
Sbjct: 598 GVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKV 657
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + P ++Y ILI G C G + A + E+ + G IT TI+K
Sbjct: 658 NELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 717
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R E LS M KG DG Y T+I F+K + A + +M G+ D
Sbjct: 718 YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 777
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
+++YN ++N + ++G+++ A L++ +M ++G D+ T+T LI+G N+K A R+H
Sbjct: 778 VITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHD 837
Query: 300 EYMNKIGF 307
E + + GF
Sbjct: 838 EMLQR-GF 844
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 138/274 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ + M E G+ PD T+ +LI G ++ ++ ++ L + M++
Sbjct: 574 ILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRN 633
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +YN+L+ + + ++ N ++ DMI + P ++ I++NG C A
Sbjct: 634 LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAF 693
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R++ + + GF ++T N ++KG C+AG A L + G P+ ITY T++
Sbjct: 694 RLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGF 753
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +++ M+ G D Y ++ F + GR++EA M +M+ GV D
Sbjct: 754 IKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDR 813
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
+Y +LIN + + L+ A+ + DEM ++GF D
Sbjct: 814 STYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 142/304 (46%), Gaps = 4/304 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F++++ + R FR L+ G + N L+ GL K G + A I +E+
Sbjct: 291 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 350
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
SG N T ++ +N+K + LS M+ KG D Y T+I A+ + G L+
Sbjct: 351 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 410
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
EA + M+ M G++ + +YN +IN CK GK A +LDEM K G D T+ IL+
Sbjct: 411 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 470
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----V 339
C+ N+ A + M G +L +++ ++ L K+G +D A+ F M+
Sbjct: 471 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLA 530
Query: 340 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D+ Y+ ++ C+ + A K+ L+ G + +++GL EA ++
Sbjct: 531 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADEL 590
Query: 400 QSKI 403
+++
Sbjct: 591 FTEM 594
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 2/171 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC + + + M E G ++T N+++ G R + + L ML
Sbjct: 678 ILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLK 737
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN-RYTDN 119
GI PD +YN+L++ + D A + M L P T+N++LNG + R +
Sbjct: 738 GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 797
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
L M + +++ G P+ TY LI G L+ A + E+ G P+
Sbjct: 798 ELIMLKMIER-GVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 192/403 (47%), Gaps = 8/403 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ +L M G+ P V TYN++I G ++ + +L + M
Sbjct: 200 LLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERN 259
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD W+YN L++ L KPDEA + D I TP TF ++NG CK D+A
Sbjct: 260 GCNPDDWTYNILIYGLCG-EKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDA 318
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
LR+ + +L Y +LI L K R + A+ + E+ +G APN + YT+I+
Sbjct: 319 LRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDG 378
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K LE+ M+ +G + + Y ++I ++ +L +A + +M DG+
Sbjct: 379 YCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPG 438
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++Y TLI CK+ + + A+ L + ME+ G D+ + +L LCK+G + A
Sbjct: 439 VITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEA---YS 495
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
++ + G Y +VD K G D A + E M + DS+TYS ++ LCK K
Sbjct: 496 FLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQK 555
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+L A +L SGV+ A ++ + G AK +
Sbjct: 556 KLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSM 598
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 182/383 (47%), Gaps = 7/383 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D +LN G +P V+T+ ++I G + + +L + ML D+ +Y L
Sbjct: 281 DEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVL 340
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
++ L + + EA +M L P + +++G CK AL +FR ++ G
Sbjct: 341 INVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGC 400
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P TY+ LI GL + +L A ++ ++ + G P ITYTT+++ + ++
Sbjct: 401 RPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFR 460
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ M++ G T D Y + A K GR +EA ++ V GV L V+Y +L++ +
Sbjct: 461 LFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFS 517
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K G + A +L+++M +G + D YT+++L+ LCK + A L+ M G N+
Sbjct: 518 KAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIV 577
Query: 313 AYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
AY I+ + K+GK DHA ++F M + TY+ + + CK ++ A L+
Sbjct: 578 AYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEM 637
Query: 369 LKSGVRILKSAQKAVVDGLRHSG 391
+ GV ++G H G
Sbjct: 638 ERDGVAPDVVTYNVFINGCGHMG 660
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 179/384 (46%), Gaps = 23/384 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID YC+ A + M G P+ TY+SLI G ++ L ++ L+ +M E G
Sbjct: 375 IIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDG 434
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P V +Y +L+ + + D A R+F+ M LTP +N++ + LCK+ + A
Sbjct: 435 ITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEA- 493
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L + G V VTY L+ G KAG A +++++ + G ++ TY+ +++
Sbjct: 494 --YSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQAL 551
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +K L IL M G + Y +I+ +K G+ A +M++ G +
Sbjct: 552 CKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSA 611
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y I+ YCK G++E A L+ EME+ G D T+ + I+G G + A L+
Sbjct: 612 TTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKR 671
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKID-HAIN------------VFESME--VKD----- 341
M + N Y ++ K +D H ++ V++ +E VK
Sbjct: 672 MIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPT 731
Query: 342 SFTYSSMVHNLCKAKRLPSASKLL 365
+ TYSS++ CKA RL A L
Sbjct: 732 AVTYSSIIAGFCKATRLEEACVLF 755
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 175/363 (48%), Gaps = 8/363 (2%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
+Y LI G + +L LL M++ G ++ +Y L+ L + G+ A RV ++M
Sbjct: 162 SYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEM 221
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
+ P T+N M++G CK+ +AL + ++++G P+ TYNILI GLC +
Sbjct: 222 PLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLC-GEKP 280
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
A +L + G P IT+T I+ + + L + ++M D Y +
Sbjct: 281 DEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVL 340
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I +K R KEA + + +M +G+ ++V Y ++I+ YCK GK+ AA + ME +G
Sbjct: 341 INVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGC 400
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
+ +T++ LI GL + + A + M + G + Y ++ K + D+A
Sbjct: 401 RPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFR 460
Query: 333 VFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
+FE ME D Y+ + H LCK+ R A L ++ GV + K ++VDG
Sbjct: 461 LFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFS 517
Query: 389 HSG 391
+G
Sbjct: 518 KAG 520
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 164/375 (43%), Gaps = 21/375 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D + + + D ++ +M G D TY+ L+ + L+ +L +LD+M G
Sbjct: 512 LVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSG 571
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ ++ +Y ++ + + GK D A +F +MI P T+ + ++ CK + A
Sbjct: 572 VKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAE 631
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ +++ G P++VTYN+ I G G + A LK + D+ PN TY ++K
Sbjct: 632 HLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHF 691
Query: 182 FRNR----------------KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
+ + ++L M + G Y ++IA F K RL+EA
Sbjct: 692 LKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEA 751
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ M + + Y LI C A + +M + GF+ ++ LI G
Sbjct: 752 CVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVG 811
Query: 286 LCKAGNIKGAR-LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 340
LC G+ A+ L + + ++ N A+ + D L K G +D + +ME +
Sbjct: 812 LCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQLLSAMENRHCQI 871
Query: 341 DSFTYSSMVHNLCKA 355
DS TYS + N+ +A
Sbjct: 872 DSETYSMVTDNIHEA 886
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 118/275 (42%), Gaps = 21/275 (7%)
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
G LR A W+L + G N +YT +++ R + L +L M + G + +
Sbjct: 138 GGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHT 197
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y +I K GR+ A +E+M GV + +YN +I+ YCK G+++ A + ME
Sbjct: 198 YTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALME 257
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
+ G D +T+ ILI GLC + L + + + GF + + I++ K +ID
Sbjct: 258 RNGCNPDDWTYNILIYGLCGEKPDEAEELLNDAIVR-GFTPTVITFTNIINGYCKAERID 316
Query: 329 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 384
A+ V SM D Y +++ L K R A + + +G+ +++
Sbjct: 317 DALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSII 376
Query: 385 DG----------------LRHSGCRREAKKIQSKI 403
DG + H GCR A S I
Sbjct: 377 DGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLI 411
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 192/387 (49%), Gaps = 15/387 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D C+ + I M E GI P+V+TYN +I G S + LL +M+E
Sbjct: 86 IVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERN 145
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV ++++L++ + GK A ++++M+ ++ P T T++ M++G CK+ ++A
Sbjct: 146 IDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAK 205
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKA-----------GRLRTARWILKELGDSGHAPN 170
MF + G P+++T N LI G C+A G + A+ + +E+ +G +P+
Sbjct: 206 HMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPD 265
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
+T T++ N K + LE+ ++ D +I K ++ EA D
Sbjct: 266 IVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFN 325
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+ +GV+ D+V+YN LI ++ KEG A + EM +G T+ ++DG CK
Sbjct: 326 SLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQN 385
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYS 346
++ AR ++ M G ++ ++ ++ K G++D + +F M V D+ TY+
Sbjct: 386 RLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYN 445
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGV 373
+++H CK L A + + SGV
Sbjct: 446 ALIHGFCKVGDLNGAQDIFEEMVSSGV 472
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 167/348 (47%), Gaps = 11/348 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+A+ + + M I P +TY+S+I G ++S L + + D M+ G
Sbjct: 156 LINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKG 215
Query: 62 IPPDVWSYNSLM-----------HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 110
PD+ + N+L+ H Q+G + A +FQ+MI ++P T N +L G
Sbjct: 216 CSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAG 275
Query: 111 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
LC+N + AL MF+ QK + T NI+I G+CK ++ A + L +G +
Sbjct: 276 LCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETD 335
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
+TY ++ + + +I M KG Y +++ F K RL+EA ++
Sbjct: 336 VVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVD 395
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
MV++G D+V+++TLI YCK G+++ L EM ++G D T+ LI G CK G
Sbjct: 396 SMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVG 455
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
++ GA+ E M G + + ++ L ++ + + E ++
Sbjct: 456 DLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQ 503
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 181/410 (44%), Gaps = 63/410 (15%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL------- 54
L++ C+ +++RM E G PD VTY +++ G + +L++L
Sbjct: 16 LMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQ 75
Query: 55 ----------------------------DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
EM E GI P+V +YN ++ GK +A
Sbjct: 76 IKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAE 135
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
++ +DMI ++ P TF+ ++N K A ++R + + P +TY+ +I G
Sbjct: 136 QLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGF 195
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK RL A+ + + G +P+ IT T++ C R +++
Sbjct: 196 CKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRH------------------- 236
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+I F ++G + A D ++M+++GV DIV+ NTL+ C+ GKLE A +
Sbjct: 237 -----LIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKV 291
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
+K + D T I+I+G+CK + A + G ++++ YN ++ K+G
Sbjct: 292 FQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGN 351
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
A +++ M K + TY+SMV CK RL A +++ S + G
Sbjct: 352 FLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEG 401
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 194/414 (46%), Gaps = 17/414 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ + +L +M E+ I +VV Y++++ ++ + ++ EM E G
Sbjct: 51 IVNGMCKLGDTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKG 110
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V +YN ++ GK +A ++ +DMI ++ P TF+ ++N K A
Sbjct: 111 IFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAE 170
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++R + + P +TY+ +I G CK RL A+ + + G +P+ IT T++ C
Sbjct: 171 ELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGC 230
Query: 182 FRNRKY-----------KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
R +++ + ++ M G + D T++A + G+L++A + +
Sbjct: 231 CRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFK 290
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+ LD + N +IN CK K++ A+ L + + G E D T+ ILI K G
Sbjct: 291 VFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEG 350
Query: 291 N-IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 345
N ++ ++LE + K G + YN +VD K +++ A + +SM + D T+
Sbjct: 351 NFLRAEDIYLEMLCK-GIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTF 409
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
S+++ CKA R+ +L + G+ A++ G G A+ I
Sbjct: 410 STLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDI 463
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 157/322 (48%), Gaps = 12/322 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL-----------LSCS 50
+ID +C+ + + + M G SPD++T N+LI G R ++ +
Sbjct: 191 MIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVA 250
Query: 51 LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 110
DL EM+ G+ PD+ + N+L+ L + GK ++A +F+ + TAT NI++NG
Sbjct: 251 QDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIING 310
Query: 111 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
+CK D A +F L +G ++VTYNILI K G A I E+ G P+
Sbjct: 311 MCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPS 370
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
+TY +++ + + + +++ +M +G + D + T+I + K GR+ + +
Sbjct: 371 TVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFS 430
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+M G+ D ++YN LI+ +CK G L A + +EM G D T ++ GLC
Sbjct: 431 EMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKA 490
Query: 291 NIKGARLHLEYMNKIGFDSNLE 312
++ LE + K D LE
Sbjct: 491 ELQKGLTMLEDLQK-SVDHELE 511
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 179/393 (45%), Gaps = 15/393 (3%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M E G +VVT+ +L+ G R + +L L+D M+E G PD +Y ++++ + +LG
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
A + + M + ++ +++ LCK+ A +F + + G P ++TYN
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
+I G C G+ A +L+++ + P+ +T++ ++ + K E+ M R+
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN-----------L 250
Y ++I F K RL++A + MV+ G DI++ NTLI+
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+C+ G + A L EM G D T L+ GLC+ G ++ A + K D +
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
N I++ + K K+D A ++F S+ V D TY+ ++ K A + L
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYL 360
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L G+ ++VDG EA+++
Sbjct: 361 EMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQM 393
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ D + + N + G+ DVVTYN LI + + D+ EML
Sbjct: 306 IIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCK 365
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P +YNS++ + + +EA ++ M+ +P TF+ ++ G CK D+
Sbjct: 366 GIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDG 425
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F + + G V + +TYN LI G CK G L A+ I +E+ SG P+ IT+ +++
Sbjct: 426 LELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAG 485
Query: 181 CFRNRKYKLGLEILSAMKR 199
+ + GL +L +++
Sbjct: 486 LCTKAELQKGLTMLEDLQK 504
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 83/165 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + + +F I M GI P VTYNS++ G + + L + ++D M+
Sbjct: 341 ILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSE 400
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV ++++L+ + G+ D+ +F +M L T T+N +++G CK + A
Sbjct: 401 GCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGA 460
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
+F + G P+ +T+ ++ GLC L+ +L++L S
Sbjct: 461 QDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQKS 505
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 211/437 (48%), Gaps = 39/437 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ + I + M GISP+ VT NSLI G ++ + + ++L+EM+ G
Sbjct: 367 LIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRG 426
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+P + S++ +++ L + A ++M+ +L P +++GLCK A+
Sbjct: 427 LPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAV 486
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ L GFVP +VT N LI GLCKAG ++ +L+++ + G + ITY T++ C
Sbjct: 487 ELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGC 546
Query: 182 FRNRKYKLGLEILSAMKRKG-----YTFD------------------------------G 206
+ K K G E+ M +KG YTF+
Sbjct: 547 CKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNV 606
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ Y +I + K +++E + + ++V+ ++L+ V YN+LI YC G + AA+ L D+
Sbjct: 607 YTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDD 666
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV---DRLGK 323
M+ +G T++ L+ GLC G + A+ L+ M K G N+ Y I+ +LG+
Sbjct: 667 MKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQ 726
Query: 324 DGKIDHAINVFESMEV-KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
K++ + S + + FTY+ M+ CK + A+KLL + G+ A
Sbjct: 727 MNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNA 786
Query: 383 VVDGLRHSGCRREAKKI 399
+GL G EA K+
Sbjct: 787 FTNGLCKEGKVEEAFKV 803
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 170/333 (51%), Gaps = 4/333 (1%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
R+ G P++VT N+LI G + + +L LL +MLE G+ D +YN+L+ + G
Sbjct: 491 RLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEG 550
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K E + ++M+ + P TFN++L+GLC D A R++ +K+G+VP + TY
Sbjct: 551 KVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYG 610
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
++I G CKA ++ +L EL N++ Y ++++ N + MK +
Sbjct: 611 VMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSR 670
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G Y +++ IG + +A +++M +G+ ++V Y T+I Y K G++
Sbjct: 671 GVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKV 730
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
++L EM +K+T+TI+IDG CK G K A L M + G + YN +
Sbjct: 731 NIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNG 790
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMV 349
L K+GK++ A V + M D TY++++
Sbjct: 791 LCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLI 823
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 178/377 (47%), Gaps = 4/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ I+ + D +L M E G P+ V YN+LI G + +S +L + D+ML
Sbjct: 331 VFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSK 390
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+ + NSL+ + + +A V ++MI L +F++++N LC A
Sbjct: 391 GISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTA 450
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L R + P L+ GLCKAG+ A + L G PN +T ++
Sbjct: 451 LHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHG 510
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + L++L M +G FD Y T+I+ K G++KE + E+MV G+Q D
Sbjct: 511 LCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPD 570
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I ++N L++ C K++ A L E +K G+ + YT+ ++IDG CKA ++ L
Sbjct: 571 IYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLN 630
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAK 356
+ + N YN ++ +G ++ A + + M+ + TYSS++H LC
Sbjct: 631 ELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIG 690
Query: 357 RLPSASKLLLSCLKSGV 373
+ A LL K G+
Sbjct: 691 LVDDAKHLLDEMRKEGL 707
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 180/361 (49%), Gaps = 4/361 (1%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
Y + + + GI PDV ++++I + ++ L +M ++G+ P+V +YN+++H
Sbjct: 241 YEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHG 300
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
L + G+ DEA R + M+ ++P T+++ +NGL K D A + + + + GFVP
Sbjct: 301 LCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPN 360
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
V YN LI G CK G + A I ++ G +PN++T ++++ ++ + +L
Sbjct: 361 EVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLE 420
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M +G + + VI R A ++ +M+ ++ + TL++ CK G
Sbjct: 421 EMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAG 480
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
K A L + +GF + T LI GLCKAGN++ L M + G + YN
Sbjct: 481 KQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYN 540
Query: 316 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++ K+GK+ + E M K D +T++ ++H LC A ++ AS+L C K+
Sbjct: 541 TLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKN 600
Query: 372 G 372
G
Sbjct: 601 G 601
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 182/382 (47%), Gaps = 9/382 (2%)
Query: 1 MLIDAY-CQFVSFDAGYT--ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 57
+L+ Y QF G+ + + + + G+ P + T L++ + + L S ++ D +
Sbjct: 188 LLVHVYSTQFKHLGFGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFI 247
Query: 58 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
GI PDV ++++++ + + D+A +F M + P T+N +++GLCK+
Sbjct: 248 CLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRL 307
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
D A R + K P L+TY++ I GL K ++ A +LKE+ + G PN + Y T+
Sbjct: 308 DEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTL 367
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + L+I M KG + + ++I F K ++ +A + +E+M+ G+
Sbjct: 368 IDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGL 427
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGAR 296
++ S++ +IN C + + A + EM + + T L+ GLCKAG +
Sbjct: 428 PINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVE 487
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNL 352
L + K GF N+ N ++ L K G + + + M V D TY++++
Sbjct: 488 LWCRLLGK-GFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGC 546
Query: 353 CKAKRLPSASKLLLSCLKSGVR 374
CK ++ +L +K G++
Sbjct: 547 CKEGKVKEGFELKEEMVKKGIQ 568
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 98/182 (53%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI AYC + +A + + + M+ G+ TY+SL+ G L+ + LLDEM + G
Sbjct: 647 LIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEG 706
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V Y +++ +LG+ ++ N V Q+M ++ P T+ IM++G CK T A
Sbjct: 707 LLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAA 766
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + + G +P+ VTYN GLCK G++ A + E+ + ITYTT++ C
Sbjct: 767 KLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDGC 826
Query: 182 FR 183
+
Sbjct: 827 HQ 828
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 177/350 (50%), Gaps = 6/350 (1%)
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
+L+ G+PP+ +N LM + + GK A VF +M+ + P TFN +++G+CK
Sbjct: 105 LLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASD 164
Query: 117 TDNALRMFRGLQ-KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
+NA RGL K G P++ TY I+GLCK GR++ A + +E+ + G PN + T
Sbjct: 165 LNNA-NALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLT 223
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T++ + GLE+ M +G D Y ++ F ++ +K A D +E+M D
Sbjct: 224 TLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKD 283
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G++ D V+Y TLI+ CKEG+L+ A + EM +G D T+T LI GL KAG A
Sbjct: 284 GLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDA 343
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHN 351
L M + G + Y ++D K+G + + M+ K TY+ +++
Sbjct: 344 ERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNG 403
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
C ++ +A LL + L GV ++DG G R+ ++++S
Sbjct: 404 FCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELKS 453
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 171/345 (49%), Gaps = 3/345 (0%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + M G+ P VVT+N+L++G + S L+ + L M + GI PDV++Y + + L
Sbjct: 136 VFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLC 195
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G+ +A +F++M L P T +++ CK L + + G +LV
Sbjct: 196 KTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLV 255
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
YN L+ G C+ ++ A I++E+ G P+ +TYTT++ C + + +E+ M
Sbjct: 256 AYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEM 315
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+G D Y +I+ K GR +A + +M+ G+Q D +Y +I+ +CK G +
Sbjct: 316 SDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDV 375
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ + L EM+ +G T+ ++++G C G +K A + L M IG N YN +
Sbjct: 376 KTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNIL 435
Query: 318 VDRLGKDGKI--DHAINVFESMEVKDSFTYSSMVHNLCKAKRLPS 360
+D K GK+ + + M V D Y+S+++ K K S
Sbjct: 436 LDGHCKHGKVRDTEELKSAKGM-VSDFGVYTSLINEFVKKKSAKS 479
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 152/322 (47%), Gaps = 3/322 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ + + M +AGI+PDV TY + I G + + ++++ +EM E G
Sbjct: 155 LMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERG 214
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +L+ + G + +M + +N ++NG C+ R A
Sbjct: 215 LNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAAN 274
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++K G P+ VTY LI G CK G L TA + +E+ D G A + +TYT ++
Sbjct: 275 DIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGL 334
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + IL M G D Y VI AF K G +K ++++M G I
Sbjct: 335 SKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGI 394
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN ++N +C G+++ A +LL+ M G + T+ IL+DG CK G ++ E
Sbjct: 395 VTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTE---EL 451
Query: 302 MNKIGFDSNLEAYNCIVDRLGK 323
+ G S+ Y +++ K
Sbjct: 452 KSAKGMVSDFGVYTSLINEFVK 473
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 137/292 (46%), Gaps = 3/292 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
I C+ + M E G++P+ V +LI + ++ L+L EM G
Sbjct: 190 FIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRG 249
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D+ +YN+L++ ++ AN + ++M L P T+ +++G CK D A+
Sbjct: 250 VKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAM 309
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + + G + VTY LI GL KAGR A IL E+ ++G P+ TYT ++
Sbjct: 310 EMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAF 369
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N K G + L M+ KG Y V+ F +G++K A + M+ GV +
Sbjct: 370 CKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPND 429
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
++YN L++ +CK GK+ L +G D +T LI+ K + K
Sbjct: 430 ITYNILLDGHCKHGKVRDTEEL---KSAKGMVSDFGVYTSLINEFVKKKSAK 478
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 4/191 (2%)
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 277
++ + EA + ++ GV + +N L+ + GKL +A + DEM ++G +
Sbjct: 91 RLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVV 150
Query: 278 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
T L+ G+CKA ++ A M K G ++ Y + L K G+I A+ +FE M
Sbjct: 151 TFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEM 210
Query: 338 EVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 393
+ ++ ++++ CK + + +L GV+ A A+V+G
Sbjct: 211 CERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDM 270
Query: 394 REAKKIQSKIR 404
+ A I ++R
Sbjct: 271 KAANDIVEEMR 281
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M+IDA+C+ G+ L M+ G +P +VTYN ++ G + + LL+ ML +
Sbjct: 364 MVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNI 423
Query: 61 GIPPDVWSYNSLM--HC 75
G+ P+ +YN L+ HC
Sbjct: 424 GVCPNDITYNILLDGHC 440
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/407 (30%), Positives = 195/407 (47%), Gaps = 4/407 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ +L RM+ G SPDVVTYNSLI G + L L+ EM
Sbjct: 199 IMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGC 258
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +YN+L++C + G+ + A F +M + TF+ ++ CKN A
Sbjct: 259 GCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREA 318
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++F ++ G P VTY L+ G CKAGRL A + E+ G N +TYT ++
Sbjct: 319 MKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDG 378
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K ++ M+R G + Y T+I + A + +M G++LD
Sbjct: 379 LCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELD 438
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ Y LI C KL+ A LL++M++ G + + +T ++D KA A L+
Sbjct: 439 VSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQ 498
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M GF N+ Y +VD L K G ID AI+ F M + Y+++V LCK
Sbjct: 499 KMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNG 558
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
RL A LL + G+ + +++DG G ++A +++K+
Sbjct: 559 RLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKM 605
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 171/350 (48%), Gaps = 1/350 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+DA+C+ + +MR G+ P+ VTY L+ G + L +L L +EM++ G
Sbjct: 305 FVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQG 364
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+P +V +Y L+ L + GK EA VF+ M + + +++G + ++ AL
Sbjct: 365 VPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERAL 424
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++ G ++ Y LI GLC +L A+ +L ++ + G PN + YT IM C
Sbjct: 425 SLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDAC 484
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ RK + +L M G+ + YC ++ K G + EA + +MV G++ ++
Sbjct: 485 FKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNV 544
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y L++ CK G+L+ A LLLDEM +G D T L+DG K GN++ A
Sbjct: 545 QAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAK 604
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHN 351
M G +L Y C V I A V M +++ T ++V+N
Sbjct: 605 MINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEM-IENGITPDAVVYN 653
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 168/341 (49%), Gaps = 10/341 (2%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P VV ++L++ LL ++ L + E+ +PP+ + N ++ CL + + A R+
Sbjct: 128 PSVV--DTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRL 185
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
F+ + P TFNIM++ LCK A + ++ G P++VTYN LI G K
Sbjct: 186 FEQLP----APNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGK 241
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
G L ++ E+ G P+ +TY ++ C + + + + MKR+G +
Sbjct: 242 CGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVT 301
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
+ T + AF K G ++EA QM G++ + V+Y L++ CK G+L+ A +L +EM
Sbjct: 302 FSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMV 361
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
+QG + T+T+L+DGLCK G + A M + G +N Y ++ +
Sbjct: 362 QQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSE 421
Query: 329 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
A+++ M+ K D Y +++ LC ++L A LL
Sbjct: 422 RALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLL 462
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 179/389 (46%), Gaps = 8/389 (2%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
D L R+RE + P+ T N ++ R S +L + E P+V+++N
Sbjct: 144 LDDAVLALARVRELRVPPNTRTCNHILLCLARER----SSELAWRLFEQLPAPNVFTFNI 199
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
++ L + G EA + M +P T+N +++G K + ++ ++ G
Sbjct: 200 MIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCG 259
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
P++VTYN L+ CK GR+ A E+ G N +T++T + +N + +
Sbjct: 260 CRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAM 319
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
++ + M+ KG + Y ++ K GRL +A +MV GV L++V+Y L++
Sbjct: 320 KLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGL 379
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
CKEGK+ A + ME+ G ++ +T LI G N + A L M G + ++
Sbjct: 380 CKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDV 439
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLS 367
Y ++ L K+D A ++ M+ ++ Y++++ KA++ A LL
Sbjct: 440 SLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQK 499
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ SG R A+VDGL +G EA
Sbjct: 500 MMDSGFRPNIVTYCALVDGLCKAGSIDEA 528
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 132/267 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + + + + ++L+ M++ G+ DV Y +LI G L + LL++M E G
Sbjct: 410 LIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECG 469
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ Y ++M F+ K EA + Q M+ P T+ +++GLCK D A+
Sbjct: 470 LKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAI 529
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F + G P + Y L+ GLCK GRL A +L E+ D G + + + T++M
Sbjct: 530 SHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGH 589
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + + M G D +GY + F + ++EA + + +M+ +G+ D
Sbjct: 590 LKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDA 649
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEME 268
V YN LIN K G +E A +L +EME
Sbjct: 650 VVYNCLINKCQKLGNMEEAAILQNEME 676
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 150/340 (44%), Gaps = 39/340 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG--ATRNSLLSCSLDLLDEML 58
+L+D C+ + M AGI + + Y +LI G +NS +L LL EM
Sbjct: 374 VLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNS--ERALSLLSEMK 431
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
+ G+ DV Y +L+ L L K DEA + M L P + +++ K R
Sbjct: 432 DKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKES 491
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A+ + + + GF P +VTY L+ GLCKAG + A ++ D G PN YT ++
Sbjct: 492 EAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALV 551
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
G C K GRL +A +++M+ G+
Sbjct: 552 D----------------------------GLC-------KNGRLDKAVLLLDEMIDKGMS 576
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
LD V +L++ + K+G L+ A+ L +M G + D Y +T + G C I+ AR
Sbjct: 577 LDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREV 636
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
L M + G + YNC++++ K G ++ A + ME
Sbjct: 637 LSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEME 676
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 8/199 (4%)
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
T+++ G L +A + ++ V + + N ++ +E E A+ L +++
Sbjct: 133 TLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPAP 192
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
+T I+ID LCK G++ AR L M IG ++ YN ++D GK G+++
Sbjct: 193 NV----FTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEV 248
Query: 331 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+ M D TY+++V+ CK R+ A + GV VD
Sbjct: 249 EKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDA 308
Query: 387 LRHSGCRREAKKIQSKIRM 405
+G REA K+ +++RM
Sbjct: 309 FCKNGMVREAMKLFAQMRM 327
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 178/346 (51%), Gaps = 7/346 (2%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD--- 83
+SPD+ T+N++I+G R L + D+ ++ G+ P V +YNSL+ + G
Sbjct: 187 VSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMY 246
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+ + ++M+ ++P TF +++NG CKN T A+R+F +++ G +VTYN LI
Sbjct: 247 HVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLI 306
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
GLC G++ +++E+ D G +PN IT+ ++K + + + M +
Sbjct: 307 SGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVE 366
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y +I + ++G++++A E M G+ ++ +YN LI + + G +A L
Sbjct: 367 PDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGL 426
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
LDEM+++G E D T+ +LI LC G ++ A L+ M+++G + N YN I+
Sbjct: 427 LDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCD 486
Query: 324 DGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 365
G I A + ME + TY+ + C+ ++ A+ LL
Sbjct: 487 KGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLL 532
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 150/297 (50%), Gaps = 3/297 (1%)
Query: 2 LIDAYCQFVSFDAGYTI---LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
LID YC+ Y + L M EAGISP VT+ LI G +NS + ++ + +EM
Sbjct: 232 LIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMK 291
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
+ GI V +YNSL+ L GK +E ++ ++M L+P TF +L G CK
Sbjct: 292 QQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMA 351
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
+A G+ + P++V Y ILI G + G++ A + + + G +PN TY ++
Sbjct: 352 DANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLI 411
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
R+ ++ +L MK KG D Y +I A G +++A +++M G++
Sbjct: 412 TGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLE 471
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
+ ++YNT+I +C +G +++AY + MEK + T+ + I C+ G + A
Sbjct: 472 PNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEA 528
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 166/347 (47%), Gaps = 7/347 (2%)
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
P S N+L+ L + D A + F+ + ++P TFN +++GLC+ A +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 124 FRGLQKHGFVPELVTYNILIKGLCK---AGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++ G P + TYN LI G CK AG + +LKE+ ++G +P A+T+ ++
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+N + + MK++G Y ++I+ G+++E ME+M G+ +
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++ ++ +CK+G + A +D M ++ E D +TILIDG + G ++ A E
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKE 393
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M K G N+ YNC++ + G A + + M+ K D TY+ ++ LC
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ A KLL + G+ ++ G G + A +I++++
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM 500
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 145/290 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ + A + M++ GI+ VVTYNSLI+G + + L++EM ++
Sbjct: 269 VLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDL 328
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ ++ ++ + G +AN M ++ P + I+++G + ++A
Sbjct: 329 GLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDA 388
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + K G P + TYN LI G ++G R+A +L E+ + G + +TY ++
Sbjct: 389 MAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGA 448
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + +++L M G + Y T+I F G +K A + +M + +
Sbjct: 449 LCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRAN 508
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+V+YN I +C+ GK++ A LL+EM + + T+ + +G+ + G
Sbjct: 509 VVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 113/250 (45%), Gaps = 7/250 (2%)
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
H P+ + ++ ++ L + + R+ + D + + TVI+ +IG+L++A
Sbjct: 152 HRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY---LLLDEMEKQGFECDKYTHTILI 283
D + + G+ + +YN+LI+ YCK+G Y +LL EM + G T +LI
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----V 339
+G CK N A E M + G +++ YN ++ L +GK++ + + E ME
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331
Query: 340 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ T+ ++ CK + A+ + + V ++DG R G +A +
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAV 391
Query: 400 QSKIRMAKIS 409
+ + IS
Sbjct: 392 KEAMAKKGIS 401
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 206/442 (46%), Gaps = 39/442 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ +YC+ + F T+++ M + + PDVVT+N ++ R + ++ L+D M+
Sbjct: 164 IMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSK 223
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P + +YNS++ L + G+ D+A VF+ M + P +FN+++ G C+ + A
Sbjct: 224 GIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEA 283
Query: 121 LRMF-----------------------------------RGLQKHGFVPELVTYNILIKG 145
LR + R +++ G +P+ V Y ++I G
Sbjct: 284 LRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGG 343
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
C+AG + A + E+ G P+ +TY T++ + R+ E+L+ MK +G D
Sbjct: 344 FCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPD 403
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ T+I + + G +++A + + + ++ DIV+YNTLI+ C++G L A L D
Sbjct: 404 LCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWD 463
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+M + + T++ILID C+ G + A L+ M G N+ YN I+ + G
Sbjct: 464 DMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSG 523
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+ M + D TY++++H K ++ A LL V+
Sbjct: 524 NVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYN 583
Query: 382 AVVDGLRHSGCRREAKKIQSKI 403
++ G G +EA + K+
Sbjct: 584 MIISGFSVHGNMQEADWVYKKM 605
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 180/360 (50%), Gaps = 4/360 (1%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 112
++ EM + + PDV ++N ++ F+ G + A + M+ + P T+N +L GL
Sbjct: 181 VISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLL 240
Query: 113 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
+N D A +FR + G P++ ++N+LI G C+AG L A KE+ P+ +
Sbjct: 241 RNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVV 300
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
+++ ++ R + E L M+ G DG Y VI F + G + EA ++M
Sbjct: 301 SFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEM 360
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
V G D+V+YNTL+N CKE +L A LL+EM+++G D T T LI G C+ GNI
Sbjct: 361 VAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNI 420
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSM 348
+ A + ++ ++ YN ++D + + G + A +++ M ++ F TYS +
Sbjct: 421 EKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSIL 480
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+ + C+ ++ +A L + G+ +++ G SG + ++ K+R K+
Sbjct: 481 IDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKV 540
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 162/305 (53%), Gaps = 1/305 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M+I +C+ + + M G PDVVTYN+L+ G + LS + +LL+EM E
Sbjct: 339 MVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKER 398
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+PPD+ ++ +L+H + G ++A + F + L P T+N +++G+C+ A
Sbjct: 399 GVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKA 458
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + P VTY+ILI C+ G++ A L E+ + G PN +TY +I+K
Sbjct: 459 NELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKG 518
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R+ G + L M+ D Y T+I +VK G++ EA + ++ M + VQ D
Sbjct: 519 YCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPD 578
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
V+YN +I+ + G ++ A + +M +G E D+YT+ +I+G AGN K + +LH
Sbjct: 579 AVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHD 638
Query: 300 EYMNK 304
E + K
Sbjct: 639 EMLQK 643
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 157/318 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + + D L MRE G+ PD V Y +I G R L+ +L + DEM+ G
Sbjct: 305 LIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFG 364
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV +YN+L++ L + + +A + +M + P TF +++G C++ + AL
Sbjct: 365 CLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKAL 424
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ F + P++VTYN LI G+C+ G L A + ++ PN +TY+ ++
Sbjct: 425 QFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSH 484
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ L M KG + Y ++I + + G + + ++ +M D V D+
Sbjct: 485 CEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDL 544
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YNTLI+ Y KEGK+ A+ LL ME + + D T+ ++I G GN++ A +
Sbjct: 545 ITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKK 604
Query: 302 MNKIGFDSNLEAYNCIVD 319
M G + + Y +++
Sbjct: 605 MGARGIEPDRYTYMSMIN 622
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 176/378 (46%), Gaps = 4/378 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
I++ + + +P ++ LI T++ + + +L+ +P + N+L+ L
Sbjct: 76 IVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALS 135
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G P ++ ++ + T T NIM++ CK + ++K P++V
Sbjct: 136 RAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVV 195
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T+N+++ +AG + A ++ + G P +TY +++K RN ++ E+ AM
Sbjct: 196 THNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAM 255
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
G D + +I F + G L+EA + ++M V D+VS++ LI L+ + G++
Sbjct: 256 DACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEM 315
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A L EM + G D +T++I G C+AG + A + M G ++ YN +
Sbjct: 316 DHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTL 375
Query: 318 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
++ L K+ ++ A + M+ + D T+++++H C+ + A + + +
Sbjct: 376 LNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRL 435
Query: 374 RILKSAQKAVVDGLRHSG 391
R ++DG+ G
Sbjct: 436 RPDIVTYNTLIDGMCRQG 453
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID++C+ D + L+ M GI P+++TYNS+I G R+ +S L +M
Sbjct: 479 ILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHD 538
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+ +YN+L+H + GK EA + + M ++ P T+N++++G + A
Sbjct: 539 KVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEA 598
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
+++ + G P+ TY +I G AG + + + E+ G AP+
Sbjct: 599 DWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 196/406 (48%), Gaps = 16/406 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++D C+ + +L +M E I P+VV Y+++I ++ S + +L EM E
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD+++YNS++ G+ +A ++ Q+M+ ++P T+N ++N K A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G +P +TYN +I G CK RL A + + G +P+ T+TT++
Sbjct: 345 AELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDG 404
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ G+E+L M R+G + Y T+I F +G L A D +QM++ GV D
Sbjct: 405 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 464
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEK-----------QGFECDKYTHTILIDGLCKA 289
IV+ NTL++ C GKL+ A + M+K G E D T+ ILI GL
Sbjct: 465 IVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINE 524
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 345
G A E M G + Y+ ++D L K ++D A +F SM K + T+
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTF 584
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+++++ CKA R+ +L + G+ ++ G R G
Sbjct: 585 NTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVG 630
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 190/401 (47%), Gaps = 5/401 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D ++ +M I D+ ++N LI S L +L ++ ++G+ PDV ++ +L
Sbjct: 96 DLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTL 155
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+H L + EA F M P TF ++NGLC+ A+ + + + G
Sbjct: 156 LHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL 215
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGL 191
P +TY ++ G+CK G +A +L+++ + H PN + Y+ I+ ++ ++
Sbjct: 216 QPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQ 275
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+ + M+ KG D F Y ++I F GR +A +++M+ + D+V+YN LIN +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
KEGK A L DEM +G + T+ +IDG CK + A M G ++
Sbjct: 336 VKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDV 395
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
+ ++D +ID + + M V ++ TY++++H C L +A L
Sbjct: 396 FTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 455
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+ SGV ++DGL +G ++A ++ ++ +K+
Sbjct: 456 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 496
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 190/376 (50%), Gaps = 5/376 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C + ++ + G+ PDVVT+ +L+ G +S +LD +M E
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFET 178
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+V ++ +LM+ L + G+ EA + M+ L P T+ +++G+CK T +A
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238
Query: 121 LRMFRGLQK-HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
L + R +++ +P +V Y+ +I LCK GR A+ + E+ + G P+ TY +++
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ ++ ++L M + + D Y +I AFVK G+ EA + ++M+ G+
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIP 358
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ ++YN++I+ +CK+ +L+AA + M +G D +T T LIDG C A I L
Sbjct: 359 NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELL 418
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKA 355
M + G +N YN ++ G ++ A+++ + M D T ++++ LC
Sbjct: 419 HEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 478
Query: 356 KRLPSASKLLLSCLKS 371
+L A ++ + KS
Sbjct: 479 GKLKDALEMFKAMQKS 494
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 156/375 (41%), Gaps = 81/375 (21%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID+ C+ + M+E GI PD+ TYNS+I G + S + LL EMLE
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN------- 114
I PDV +YN+L++ + GK EA ++ +M+ + P T T+N M++G CK
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 380
Query: 115 ----------------------------RYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ D+ + + + + G V VTYN LI G
Sbjct: 381 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGF 440
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR------- 199
C G L A + +++ SG P+ +T T++ N K K LE+ AM++
Sbjct: 441 CLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDA 500
Query: 200 ---------------------------------------KGYTFDGFGYCTVIAAFVKIG 220
+G D Y ++I K
Sbjct: 501 SHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
RL EAT M + ++V++NTLIN YCK G+++ L EM ++G D +
Sbjct: 561 RLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYI 620
Query: 281 ILIDGLCKAGNIKGA 295
LI G K GNI GA
Sbjct: 621 TLIYGFRKVGNINGA 635
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 139/278 (50%), Gaps = 11/278 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC D G +L+ M G+ + VTYN+LI G L+ +LDL +M+ G
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 460
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-----------ICGDLTPCTATFNIMLNG 110
+ PD+ + N+L+ L GK +A +F+ M + P T+NI++ G
Sbjct: 461 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICG 520
Query: 111 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
L A ++ + G VP+ +TY+ +I GLCK RL A + +G +PN
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPN 580
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
+T+ T++ + + GLE+ M R+G D Y T+I F K+G + A D +
Sbjct: 581 VVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQ 640
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
+M++ GV D ++ ++ + + +LE A +L++++
Sbjct: 641 EMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 150/321 (46%), Gaps = 5/321 (1%)
Query: 50 SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 109
++DL +ML P V + LM + ++ +PD ++Q M + +FNI++
Sbjct: 63 AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIK 122
Query: 110 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 169
C AL F + K G P++VT+ L+ GLC R+ A ++ ++ P
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRP 182
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
N +T+TT+M R + + +L M G Y T++ K G A + +
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242
Query: 230 EQM-VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+M + ++V Y+ +I+ CK+G+ A L EM+++G D +T+ +I G C
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 344
+G A L+ M + ++ YN +++ K+GK A +++ M + ++ T
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTIT 362
Query: 345 YSSMVHNLCKAKRLPSASKLL 365
Y+SM+ CK RL +A +
Sbjct: 363 YNSMIDGFCKQDRLDAAEDMF 383
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 146/326 (44%), Gaps = 40/326 (12%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
++A +F DM+ P F ++ + + D + +++ +++ ++ ++NIL
Sbjct: 61 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNIL 120
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
IK C +L A ++ G P+ +T+TT++
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLH----------------------- 157
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
G C R+ EA D+ QM + ++V++ TL+N C+EG++ A
Sbjct: 158 -----GLCVE-------DRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVA 205
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG-FDSNLEAYNCIVDRL 321
LLD M + G + + T+ ++DG+CK G+ A L M ++ N+ Y+ I+D L
Sbjct: 206 LLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSL 265
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
KDG+ A N+F M+ K D FTY+SM+ C + R A +LL L+ +
Sbjct: 266 CKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDV 325
Query: 378 SAQKAVVDGLRHSGCRREAKKIQSKI 403
A+++ G EA ++ ++
Sbjct: 326 VTYNALINAFVKEGKFFEAAELYDEM 351
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 92/201 (45%), Gaps = 6/201 (2%)
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ F +I L++A D M+ +V + L+ + + + + L +ME++
Sbjct: 52 SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN- 332
CD Y+ ILI C + A + K+G ++ + ++ L + ++ A++
Sbjct: 112 CDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDF 171
Query: 333 ---VFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
+FE+ + T++++++ LC+ R+ A LL ++ G++ + +VDG+
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231
Query: 390 SGCRREAKKIQSKIRMAKISH 410
G A + K M ++SH
Sbjct: 232 KGDTVSALNLLRK--MEEVSH 250
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 193/408 (47%), Gaps = 39/408 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ +C +IL +M + G PD VT SL+ G R + +S ++ L+D+M+E+
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN++ ++ LCK + ++A
Sbjct: 185 GYKPDIVAYNAI-----------------------------------IDSLCKTKRVNDA 209
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
F+ +++ G P +VTY L+ GLC + R A +L ++ PN ITY+ ++
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 269
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+N K E+ M R D Y ++I R+ EA + MV+ G D
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+VSYNTLIN +CK ++E L EM ++G + T+ LI G +AG++ A+
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M+ G ++ YN ++ L +G+++ A+ +FE M+ + D TY++++ +CK
Sbjct: 390 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++ A L S G++ ++ GL G E + + +K++
Sbjct: 450 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 160/333 (48%), Gaps = 4/333 (1%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K ++A +F DM+ P FN +L+ + K + D + + + ++ G +L T+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
I+I C ++ A IL ++ G+ P+ +T +++ R + + ++ M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
GY D Y +I + K R+ +A D+ +++ G++ ++V+Y L+N C + A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
LL +M K+ + T++ L+D K G + A+ E M ++ D ++ Y+ +++
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
L +ID A +F+ M K D +Y+++++ CKAKR+ KL + G+
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 377 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
++ G +G +A++ S++ IS
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/447 (28%), Positives = 200/447 (44%), Gaps = 40/447 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRM--REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM-- 57
L+D++ + D +L M R G P VTYN +I G R L + L+D M
Sbjct: 237 LLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRM 296
Query: 58 -----------------------------LEM---GIPPDVWSYNSLMHCLFQLGKPDEA 85
LEM GI P V +YN+++H +F+ G + A
Sbjct: 297 SKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAA 356
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
F +M L P T+N ++NG CK AL +F L++ G P ++TYNIL+ G
Sbjct: 357 RMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDG 416
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
C+ G L AR +E+ + G P+ TYT +M + R + E M KG D
Sbjct: 417 YCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPD 476
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
F Y T I+A + +G EA E M++ G+ D V+YN ++ CK G L+ AY+L
Sbjct: 477 CFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWM 536
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+M G + D T+T LI C+ G ++ AR + M G + Y + + G
Sbjct: 537 KMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRG 596
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+ A F+ M + + TY+ ++H LC+ R A + L+ G+ K
Sbjct: 597 NLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYT 656
Query: 382 AVVDGLRHSGCRREAKKIQSKIRMAKI 408
++DG G EA ++ S++ I
Sbjct: 657 LLIDGNCKEGNWEEAIRLYSEMHQHGI 683
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 166/338 (49%), Gaps = 38/338 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D YC+ + M E G PDV TY L+ G+ + L+ + DEML
Sbjct: 412 ILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSK 471
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD ++YN+ + LG EA ++ + MI ++ T T+NI L+GLCK+ +A
Sbjct: 472 GLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDA 531
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G P+ +TY LI C+ GRLR AR I + SG P+A+TYT
Sbjct: 532 YVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVF--- 588
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
I A+ + G L A + ++M+ +GV+ +
Sbjct: 589 --------------------------------IHAYCRRGNLYSAYGWFQKMLEEGVRPN 616
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
V+YN LI+ C+ G+ AY EM ++G +KYT+T+LIDG CK GN + A RL+
Sbjct: 617 EVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYS 676
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
E M++ G + +N + +G+ HAI E++
Sbjct: 677 E-MHQHGIHPDHCTHNALFKGF-DEGQSKHAIQYMENV 712
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 187/422 (44%), Gaps = 44/422 (10%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG---IPPDV-- 66
+D ++ M + GI P +VTYN+L+ R + + LL EM +P DV
Sbjct: 212 WDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTY 271
Query: 67 -------------------------------WSYNSLMHCLFQLGKPDEANRVFQDMICG 95
+++N L+ F G ++A + +M
Sbjct: 272 NVVINGLARKGELEKAAQLVDRMRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENE 331
Query: 96 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 155
+ P T+N +++G+ ++ + A F ++ G +P+L+TYN LI G CKAG L+ A
Sbjct: 332 GIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEA 391
Query: 156 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 215
W+ +L +G AP+ +TY ++ R + M +G D Y ++
Sbjct: 392 LWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNG 451
Query: 216 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
K+ L ++ ++M++ G+Q D +YNT I+ G A+ L + M +G D
Sbjct: 452 SRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSD 511
Query: 276 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
T+ I +DGLCK+GN+K A + M G + Y C++ + G++ A ++F+
Sbjct: 512 TVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFD 571
Query: 336 SMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
M V + TY+ +H C+ L SA L+ GVR + + L H+
Sbjct: 572 GMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVR----PNEVTYNVLIHAL 627
Query: 392 CR 393
CR
Sbjct: 628 CR 629
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 134/293 (45%), Gaps = 7/293 (2%)
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
F++M + P N++L L D+ ++ + + G P +VTYN L+
Sbjct: 183 AFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFF 242
Query: 148 KAGRLRTARWILKELG--DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
+ GR+ A +L+E+ G P+ +TY ++ R + + +++ M R
Sbjct: 243 REGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMSKKAS 301
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
F + +I + G +++A +M +G+ +V+YNT+I+ + G +EAA +
Sbjct: 302 AFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFV 361
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM G D T+ LI+G CKAGN+K A + + G ++ YN ++D + G
Sbjct: 362 EMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLG 421
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
++ A + M + D TY+ +++ K + L + L G++
Sbjct: 422 DLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQ 474
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 122/274 (44%), Gaps = 7/274 (2%)
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L FR + HG P + N++++ L R R + E+ G P+ +TY T++
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS 240
Query: 181 CFRNRKYKLGLEILSAMKRK--GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
FR + ++L M+ + G Y VI + G L++A +++M +
Sbjct: 241 FFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-K 299
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
++N LI Y G +E A L EME +G T+ +I G+ ++GN++ AR+
Sbjct: 300 ASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMK 359
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 354
M +G +L YN +++ K G + A+ +F ++ TY+ ++ C+
Sbjct: 360 FVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCR 419
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
L A + ++ G + S +++G R
Sbjct: 420 LGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSR 453
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 194/403 (48%), Gaps = 8/403 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ +L+ M G+ P V TYN++I G ++ + +L + M +
Sbjct: 289 LLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQN 348
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD W+YNSL++ L GK DEA + I TP TF ++NG CK D+A
Sbjct: 349 GCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDA 407
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
LR+ + +L Y +LI L K RL+ A+ L E+ +G APN + YT+I+
Sbjct: 408 LRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDG 467
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ LE+ M+ +G + + Y ++I ++ +L +A + +M DG+
Sbjct: 468 YCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPG 527
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++Y TLI CK+ + + A+ L + MEK G D+ + +L D LCK+G + A
Sbjct: 528 VIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEA---YS 584
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
++ + G Y +VD K G D A + E M + D +TYS ++ LCK K
Sbjct: 585 FLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQK 644
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+L A +L SGV+ A ++ + G AK +
Sbjct: 645 KLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSL 687
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 180/384 (46%), Gaps = 7/384 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
D +LN G +P V+T+ +LI G + + +L + M+ D+ +Y
Sbjct: 369 LDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGV 428
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
L++ L + + EA +M L P + +++G CK AL +F+ ++ G
Sbjct: 429 LINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEG 488
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
P TY LI GL + +L A ++ ++ + G P I YTT+++ + ++
Sbjct: 489 CHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAF 548
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+ M++ G T D Y + A K GR +EA + +V GV L V+Y +L++ +
Sbjct: 549 RLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGF 605
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
K G + A +L+++M +G + D YT+++L+ LCK + A L+ M G N+
Sbjct: 606 SKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNI 665
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
AY I+ + K+GK DHA ++F M + TY+ + + CK ++ A L+
Sbjct: 666 VAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGE 725
Query: 368 CLKSGVRILKSAQKAVVDGLRHSG 391
+ GV ++G H G
Sbjct: 726 MERDGVTPDVVTYHIFINGCGHMG 749
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 189/429 (44%), Gaps = 43/429 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I AYC+ S + +RE+G+ D T N+L+ G R S L + LL M MG
Sbjct: 185 MIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMG 244
Query: 62 IPPDVWSYNSLMHCLFQL-----------------------------------GKPDEAN 86
+ +SY L+ L++ G+ +A
Sbjct: 245 CRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDAR 304
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ +M + P T+N M++G CK+ +AL + ++++G P+ TYN LI GL
Sbjct: 305 GLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGL 364
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C G+L A +L G P IT+T ++ + + L + S M D
Sbjct: 365 C-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDL 423
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I +K RLKEA + + +M +G+ ++V Y ++I+ YCK G + AA +
Sbjct: 424 QAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKL 483
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
ME +G + +T+ LI GL + + A + M + G + AY ++ K +
Sbjct: 484 MEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHE 543
Query: 327 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
D+A +FE ME D Y+ + LCK+ R A L ++ GV + K +
Sbjct: 544 FDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRKGVVLTKVTYTS 600
Query: 383 VVDGLRHSG 391
+VDG +G
Sbjct: 601 LVDGFSKAG 609
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 175/396 (44%), Gaps = 47/396 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID YC+ A + M G P+ TY SLI G ++ L ++ L+ +M E G
Sbjct: 464 IIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDG 523
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY----- 116
I P V +Y +L+ + + D A R+F+ M LTP +N++ + LCK+
Sbjct: 524 ITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAY 583
Query: 117 ---------------------------TDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
TD A + + G +L TY++L++ LCK
Sbjct: 584 SFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQ 643
Query: 150 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 209
+L A IL ++ SG N + YT I+ + K+ + + M G+ Y
Sbjct: 644 KKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTY 703
Query: 210 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
I+++ KIG+++EA + +M DGV D+V+Y+ IN G ++ A+ L M
Sbjct: 704 TVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVD 763
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 329
E + +T+ +L+ +K + ++ Y++ G + +E N + L + + H
Sbjct: 764 ASCEPNCWTYWLLLKHF-----LKMSLINAHYIDTSGMWNWIE-LNTVWQLLER--MMKH 815
Query: 330 AINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 365
+N TYSS++ CKA RL A LL
Sbjct: 816 GLN-------PTVVTYSSIIAGFCKATRLEEACVLL 844
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 177/376 (47%), Gaps = 11/376 (2%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + + + G+ PD VTYN++I + L+ + + E G+ D ++ N+L L
Sbjct: 166 LYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNAL---LL 222
Query: 78 QLGKPDEANRVFQDMICGDLTPC---TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
+ + + ++ L C ++ I++ GL + R AL + + + G
Sbjct: 223 GYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSL 282
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
L Y +LIKGLCK GR+ AR +L E+ G P+ TY ++ ++ + K L I
Sbjct: 283 NLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIK 342
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
+ M++ G D + Y ++I G+L EA + + + G ++++ LIN YCK
Sbjct: 343 ALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKA 401
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
+++ A + M + D + +LI+ L K +K A+ L M G N+ Y
Sbjct: 402 ERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIY 461
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
I+D K G + A+ VF+ ME + +++TY S+++ L + K+L A L+ +
Sbjct: 462 TSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQE 521
Query: 371 SGVRILKSAQKAVVDG 386
G+ A ++ G
Sbjct: 522 DGITPGVIAYTTLIQG 537
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 177/393 (45%), Gaps = 23/393 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D + + + D ++ +M G D+ TY+ L+ + L+ +L +LD+M G
Sbjct: 601 LVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSG 660
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ ++ +Y ++ + + GK D A +F +MI P T+ + ++ CK + A
Sbjct: 661 VKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAE 720
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ +++ G P++VTY+I I G G + A LK + D+ PN TY ++
Sbjct: 721 HLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLL--- 777
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K+ L + +++A + D G I L +E+M+ G+ +
Sbjct: 778 ----KHFLKMSLINA-----HYIDTSGMWNWI-------ELNTVWQLLERMMKHGLNPTV 821
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y+++I +CK +LE A +LLD M + ++ +T+LI C +
Sbjct: 822 VTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTD 881
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKR 357
M + GF LE+Y+ ++ L +G D A ++F + D + + L KA
Sbjct: 882 MIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGH 941
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
+ S+LL + RI + + D +R +
Sbjct: 942 VDFCSQLLAAMDNRHCRIDSESYSMLTDSIREA 974
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 153/355 (43%), Gaps = 21/355 (5%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
YN + L + + +++ ++ L P T T+N M+ CK A R F L+
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
+ G + T N L+ G C+ LR A W+L + G N +YT +++ + R +
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVR 266
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
L ++ M + G + + Y +I K GR+ +A +++M GV + +YN +I
Sbjct: 267 EALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
+ YCK G+++ A + ME+ G D +T+ LI GLC G + A L GF
Sbjct: 327 DGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFT 385
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
+ + +++ K +ID A+ V +M D Y +++ L K RL A +
Sbjct: 386 PTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKET 445
Query: 365 LLSCLKSGVRILKSAQKAVVDG----------------LRHSGCRREAKKIQSKI 403
L +G+ +++DG + H GC A S I
Sbjct: 446 LNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLI 500
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 200/406 (49%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+A C+ + TI+ ++ E+ +SPD TY S+I G R L +L + ++M + G
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y++L++ L G+ +EA + ++MI + P T + LC ++A
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+F ++ G P + TY LI GLC +G L+ A + + G PN +TY ++
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINIL 400
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
NR+ K +L+ M R G + + Y +I + +G K+A M M+ G ++
Sbjct: 401 VENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANL 460
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNT+I YC G +A +LD M G + D++++T LI G CK ++ A
Sbjct: 461 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNE 520
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G N Y ++D KD K+D A ++ E M+ + TY+ ++H L K
Sbjct: 521 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN 580
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A +L ++ G+ A++DGL +G A ++ +K+
Sbjct: 581 FSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 208/465 (44%), Gaps = 80/465 (17%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C+ D+ + N+M + G P+ VTY++LI G + ++ + DL+ EM+ G
Sbjct: 256 MILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHG 315
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM--------------------ICGDLT--- 98
I P + + L +G ++A R+F DM + G L
Sbjct: 316 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAI 375
Query: 99 ------------PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
P T T+N ++N L +NR A + + ++G P +VTYN +IKG
Sbjct: 376 GLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGY 435
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C G + A ++ + GH+ N +TY TI+K + L IL M+ G D
Sbjct: 436 CILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDE 495
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ Y +I F KI +++ A +MV DG+ + V+Y LI+ YCK+ KL+ A LL+
Sbjct: 496 WSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEH 555
Query: 267 MEK-----------------------------------QGFECDKYTHTILIDGLCKAGN 291
M++ +G + T+T +IDGLCK G+
Sbjct: 556 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS 615
Query: 292 IKGARLHLEYMNKI---GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 344
L LE NK+ G NL Y+ ++ LG++GK++ A N+F +E + D T
Sbjct: 616 TS---LALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEIT 672
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
Y M+ + ++ A L +K+G + ++ GL++
Sbjct: 673 YVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN 717
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 191/397 (48%), Gaps = 20/397 (5%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
+ L+ + ++G+ + Y++L+ +R + + +D ML G+ P++ YN++++ L
Sbjct: 166 SFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 225
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ G +A + + + +++P T T+ M+ G C+ D+AL++F + K G P
Sbjct: 226 CKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNT 285
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
VTY+ LI GLC +GR+ A +++E+ G P A T T + Y+ +
Sbjct: 286 VTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVD 345
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
MK KG + + Y +I+ G LK A +M DGV + V+YN LIN+ + +
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
++ A+++L+ M + G + T+ +I G C G+ K A L + M + G +NL YN
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 465
Query: 317 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
I+ G A+ + + M D ++Y+ ++ CK ++ SA L + G
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525
Query: 373 VRILKSAQKAVVDG----------------LRHSGCR 393
+ + A++DG ++ SGCR
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 180/374 (48%), Gaps = 11/374 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I YC ++N M + G S ++VTYN++I G + + +L +LD M + G
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD WSY L+ ++ K + A +F +M+ L P T+ +++G CK+ D A
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ +++ G P + TYN+LI GL K A + K + + G PN +TYT ++
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N L LE+ + M +G + Y ++I A + G+++EA + ++ G+ D
Sbjct: 611 CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 670
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL-- 299
++Y +I Y GK+E A+ L M K G + +T+ +LI GL + RL
Sbjct: 671 ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALP 730
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLP 359
+ + F + + K ++D ++V +V++ ++V NL A R
Sbjct: 731 DVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSV----QVQN-----ALVSNLSTAGRWF 781
Query: 360 SASKLLLSCLKSGV 373
A++LL S + G+
Sbjct: 782 EANELLGSMISQGL 795
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 151/345 (43%), Gaps = 21/345 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + +F + M E GI P+VVTY ++I G +N S +L++ ++M+E
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P++ +Y+SL+ L Q GK +EA +F ++ L P T+ M+ + ++A
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN-AITYTTIMK 179
+ K G P L TY +LIKGL L R L L D PN + Y T +
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQR--LAALPDV--VPNCSFGYQTTDQ 745
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK----IGRLKEATDYMEQMVTD 235
+ +S M K D V A V GR EA + + M++
Sbjct: 746 ------------DAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQ 793
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G+ D +YN+L+ + ++ A + M QG E + LI LC+ K A
Sbjct: 794 GLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEA 853
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
R+ E M ++ + ++D L +DG D + ME +
Sbjct: 854 RITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 898
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 76/161 (47%)
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++K C + L + + G F Y ++ ++G D +M+++G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
VQ +++ YN +IN CK+G + A ++ ++ + D +T+T +I G C+ ++ A
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M K G + N Y+ +++ L G+++ A ++ M
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 311
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 94/237 (39%), Gaps = 25/237 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS------------- 48
+I+AY + + L RM +AG P + TY LI G LL+
Sbjct: 676 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPN 735
Query: 49 CSLD-----------LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 97
CS + ++ E+ V N+L+ L G+ EAN + MI L
Sbjct: 736 CSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGL 795
Query: 98 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 157
P +N +L L + R D A+ +F+ + G L Y LI LC+ R + AR
Sbjct: 796 CPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARI 855
Query: 158 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
+ + P+ + ++ R+ L +E L M+ + Y F T++A
Sbjct: 856 TFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRY-MPSFHIYTILA 911
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 55/127 (43%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L M G+ PD YNSL+ R + ++ + M G + Y L+ L
Sbjct: 786 LLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALC 845
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
QL + EA F++M+ P ++++GL ++ Y D + ++ ++P
Sbjct: 846 QLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFH 905
Query: 138 TYNILIK 144
Y IL +
Sbjct: 906 IYTILAR 912
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 189/372 (50%), Gaps = 6/372 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M E G PDVVTY+++I+G + ++ +L++++EM E G+ PDV +Y ++ L + GK
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
DEA+ +F MI + T +N ++NGLCK+ + A ++ + G+ P+ +TYN
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY--KLGLEILSAMKR 199
++ GLC+ G++ A+ + G++P+ + Y ++ ++ K GL M
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
+ D Y T+I F ++ + EA + ++ G D V+YN+++ ++ ++
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A + +M G + T++I++ G C+ GN+ E M + F ++ N ++D
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300
Query: 320 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
L K K+D A V E M V D TY+ ++ LCK + A +L + + +G
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 360
Query: 376 LKSAQKAVVDGL 387
+ V++GL
Sbjct: 361 DIVSYSVVLNGL 372
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 210/446 (47%), Gaps = 54/446 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG-------------------- 40
+++D C+ D + ++M E G S + V YN+LI G
Sbjct: 50 IIVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASK 109
Query: 41 ------ATRNSLLS--CSL-------DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
T N++LS C + D M G PDV +YN L+ L++ GK EA
Sbjct: 110 GYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEA 169
Query: 86 NRVFQDMICGD--LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+F+ M D + P T+N +++G C+ TD A+++F+ + G++P+ VTYN ++
Sbjct: 170 WGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSIL 229
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
GL + + A + K++ DSG APN TY+ ++ R LE+ M K ++
Sbjct: 230 LGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFS 289
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D VI K ++ +A +E+M G D+V+YN L++ CK ++ A+ L
Sbjct: 290 PDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHEL 349
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
M G D +++++++GLCK + AR+ + M + ++ +N ++D L K
Sbjct: 350 FSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCK 409
Query: 324 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
GK+D A ++ + M + D T ++++H LC+ KR A +L ++ G
Sbjct: 410 AGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKG------- 462
Query: 380 QKAVVDGLRH----SGCRREAKKIQS 401
V D L H +G RE K Q+
Sbjct: 463 --TVADVLPHNIVLAGLCREGKLAQA 486
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/482 (26%), Positives = 217/482 (45%), Gaps = 80/482 (16%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ + + Y +L M G PD +TYN++++G R +S + D M G
Sbjct: 86 LINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRG 145
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD--LTPCTATFNIMLNGLCKNRYTDN 119
PDV +YN L+ L++ GK EA +F+ M D + P T+N +++G C+ TD
Sbjct: 146 YSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDE 205
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI-- 177
A+++F+ + G++P+ VTYN ++ GL + + A + K++ DSG APN TY+ +
Sbjct: 206 AMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLS 265
Query: 178 -------MKCCF--------------------------RNRKYKLGLEILSAMKRKGYTF 204
M C + +K ++L M + G
Sbjct: 266 GHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVP 325
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D Y ++ K + +A + MV +G DIVSY+ ++N CK K+ A +L
Sbjct: 326 DVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLF 385
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGAR---------------------LH----- 298
D M ++ D T IL+DGLCKAG + A+ +H
Sbjct: 386 DRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRD 445
Query: 299 ---------LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-------DS 342
+YM + G +++ +N ++ L ++GK+ A+ F+SM VK D
Sbjct: 446 KRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSM-VKSDGEFSPDV 504
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 402
TY+++V+ L +A R+ A SG A +++GLR G +A ++
Sbjct: 505 VTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQA 564
Query: 403 IR 404
++
Sbjct: 565 MK 566
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 188/388 (48%), Gaps = 15/388 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ D + + G PD VTYNS++ G R S + + ++ +M++ G
Sbjct: 193 LIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSG 252
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y+ ++ ++G ++++M +P N +++ LCK + D+A
Sbjct: 253 CAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAH 312
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + K G VP++VTYNIL+ GLCK + A + + D+G AP+ ++Y+ ++
Sbjct: 313 KVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGL 372
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + M + D + ++ K G+L EA D ++ M V D
Sbjct: 373 CKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDG 432
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+ TL++ C++ + + A L M ++G D H I++ GLC+ G + A L +
Sbjct: 433 VTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKS 492
Query: 302 MNKIG--FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK- 354
M K F ++ Y +V+ L + G++D A++ F+ M D Y+++++ L K
Sbjct: 493 MVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQ 552
Query: 355 -----AKRLPSASK---LLLSCLKSGVR 374
A RL A K L C K+ +R
Sbjct: 553 GRHIQADRLTQAMKEKGFLSDCFKAPLR 580
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 165/313 (52%), Gaps = 4/313 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ +C+ + + M E SPDV+ N++I + + + +L+EM ++
Sbjct: 262 IVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKI 321
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +YN L+ L + D+A+ +F M+ P +++++LNGLCK +A
Sbjct: 322 GAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDA 381
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + + VP++VT+NIL+ GLCKAG+L A+ +L + + P+ +T TT+M
Sbjct: 382 RVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHG 441
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV-TDG-VQ 238
R+++ + + M KG D + V+A + G+L +A + + MV +DG
Sbjct: 442 LCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFS 501
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG-NIKGARL 297
D+V+Y TL+N + G+++ A +M G D + L++GL K G +I+ RL
Sbjct: 502 PDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRL 561
Query: 298 HLEYMNKIGFDSN 310
+ M + GF S+
Sbjct: 562 -TQAMKEKGFLSD 573
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 127/248 (51%), Gaps = 6/248 (2%)
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ + G P+ +TY+TI+ + K LE++ M KG D Y ++ + G+
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
+ EA + +M+ G + V+YN LIN CK+ +E AY LL+EM +G+E D T+
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 341
++ GLC+ G + A+ + M G+ ++ AYN ++D L K+GK+ A +F++M++ D
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 342 S------FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
TY++++ C+ ++ A KL + G +++ GL E
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240
Query: 396 AKKIQSKI 403
A+++ K+
Sbjct: 241 AEEMFKKM 248
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 4/179 (2%)
Query: 232 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
M G + D+V+Y+T+I+ CK GK+ A +++EM ++G D T+TI++D LC+AG
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSS 347
+ A M + G +N AYN +++ L KD I+ A + E M K D+ TY++
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
++ LC+ ++ A + S G A ++D L G EA + + MA
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMA 179
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 191/377 (50%), Gaps = 10/377 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ D +L R+ E +VV N++I G L+ + +L + M G
Sbjct: 288 LLQGLCRTRQADEACAMLGRLPEV----NVVMLNTVIRGCLTEGKLARATELYEMMGSKG 343
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PPDV +Y+ LMH L +LG+ A R+ +M P T++ +L+ C+N D+A
Sbjct: 344 CPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDAR 403
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + GF YN +I LCK G+L A +++E+ G P+ TY T++
Sbjct: 404 AMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHL 463
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N + I + +G +G Y T+I A ++ GR +E +M+ G QLD+
Sbjct: 464 CNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDV 523
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLE 300
+SYN LI CKEG ++ + LL+EM +G + + +++ +LI+ LCKAG ++ A L E
Sbjct: 524 ISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKE 583
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
+N+ G ++ YN +++ L K G A+N+ E + + D TY+ ++ CK +
Sbjct: 584 MLNQ-GLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVR 642
Query: 357 RLPSASKLLLSCLKSGV 373
L A+ LL + G+
Sbjct: 643 LLDDAAMLLDKAISGGI 659
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 204/435 (46%), Gaps = 37/435 (8%)
Query: 5 AYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP 64
A C+ +L M G PD V Y ++I ++ + LLDEML MG
Sbjct: 186 ALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAA 245
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 124
DV ++N L+ L LG+ EA R+ M+ P T+ +L GLC+ R D A M
Sbjct: 246 DVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAML 305
Query: 125 ---------------RG----------------LQKHGFVPELVTYNILIKGLCKAGRLR 153
RG + G P++ TY+IL+ GLCK GR
Sbjct: 306 GRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFG 365
Query: 154 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
+A +L E+ + G APN +TY+T++ RN + +L M KG++ + GY +I
Sbjct: 366 SAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGII 425
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
A K G+L +AT +++M + G + DI +YNT+I C +E A + + ++G
Sbjct: 426 YALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVV 485
Query: 274 CDKYTHTILIDGLCKAGNIK-GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
+ T+ LI L + G + G RL E + G ++ +YN ++ L K+G +D ++
Sbjct: 486 ANGITYNTLIHALLRNGRWQEGLRLASEMLLH-GCQLDVISYNGLIKALCKEGNVDRSMA 544
Query: 333 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
+ E M K ++F+Y+ +++ LCKA ++ A +L L G+ +++GL
Sbjct: 545 LLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLC 604
Query: 389 HSGCRREAKKIQSKI 403
G A + K+
Sbjct: 605 KVGWTHAALNLLEKL 619
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 158/318 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C+ F + +L+ M E G +P++VTY++L+ RN + + +LD+ML
Sbjct: 353 ILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAK 412
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G + YN +++ L + GK D+A R+ Q+M P T+N M+ LC N + A
Sbjct: 413 GFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEA 472
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+FR L + G V +TYN LI L + GR + + E+ G + I+Y ++K
Sbjct: 473 EHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKA 532
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + +L M KG + F Y +I K G++++A + ++M+ G+ D
Sbjct: 533 LCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPD 592
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+YNTLIN CK G AA LL+++ + D T+ ILI CK + A + L+
Sbjct: 593 IVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLD 652
Query: 301 YMNKIGFDSNLEAYNCIV 318
G N + +V
Sbjct: 653 KAISGGIVPNERTWGMMV 670
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 180/394 (45%), Gaps = 44/394 (11%)
Query: 50 SLDLLDEMLE-MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 108
+L LLD+M + P SYN ++ L + +A +++ M+ + P T TF +
Sbjct: 125 ALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 184
Query: 109 NGLCKNRYTDNALRMFRGLQKHGFVPELV------------------------------- 137
LC+ +AL + RG+ +HG VP+ V
Sbjct: 185 RALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCA 244
Query: 138 ----TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 193
T+N L+ GLC GR+R A ++ + G P+ +TY +++ R R+ +
Sbjct: 245 ADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAM 304
Query: 194 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 253
L + TVI + G+L AT+ E M + G D+ +Y+ L++ CK
Sbjct: 305 LGRLPEVNVVM----LNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCK 360
Query: 254 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
G+ +A +LDEME++G + T++ L+ C+ G AR L+ M GF N +
Sbjct: 361 LGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQG 420
Query: 314 YNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 369
YN I+ L KDGK+D A + + M+ + D TY++M+++LC + A + + +
Sbjct: 421 YNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLI 480
Query: 370 KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ GV ++ L +G +E ++ S++
Sbjct: 481 EEGVVANGITYNTLIHALLRNGRWQEGLRLASEM 514
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 136/312 (43%), Gaps = 8/312 (2%)
Query: 97 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 156
++P ++N++L+ L + +AL ++R + + P T+ + + LC+ GR A
Sbjct: 138 VSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDAL 197
Query: 157 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 216
+L+ + G P+A+ Y T++ +L M G D + ++
Sbjct: 198 ALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGL 257
Query: 217 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
+GR++EA +++M+T G +V+Y L+ C+ + + A +L + E +
Sbjct: 258 CGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLP----EVNV 313
Query: 277 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
+I G G + A E M G ++ Y+ ++ L K G+ A+ + +
Sbjct: 314 VMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDE 373
Query: 337 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 392
ME K + TYS+++H+ C+ A +L L G + ++ L G
Sbjct: 374 MEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGK 433
Query: 393 RREAKKIQSKIR 404
+A ++ +++
Sbjct: 434 LDQATRLVQEMK 445
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLI+ C+ + M G++PD+VTYN+LI G + +L+LL+++
Sbjct: 563 MLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNE 622
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+ PD+ +YN L+ HC +L D+A + I G + P T+ +M+ +
Sbjct: 623 NVHPDIVTYNILISWHCKVRL--LDDAAMLLDKAISGGIVPNERTWGMMVQNFVRQ 676
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 195/406 (48%), Gaps = 39/406 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ F+ + + +M E G +PDV Y ++I G + L + +L+ M G
Sbjct: 258 LIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYG 317
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V YN+L+ L + +EA + +M D TFNI+++ LC+N D +
Sbjct: 318 LSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVI 377
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +HG +P+++TY +I G CK G + A +L+ + G PN ++YT ++K
Sbjct: 378 EVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLK-- 435
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
G C+ R +A + M QM+ G +
Sbjct: 436 --------------------------GLCSA-------ERWVDAEELMSQMIQQGCPPNP 462
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++NTLIN CK+G +E A LL +M G D +++ +IDGL KAGN A L
Sbjct: 463 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNV 522
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M K G N Y+ I L +G+I+ I +FE+++ D+ Y++++ +LCK
Sbjct: 523 MVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGE 582
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A + L + SG +S ++ GL G +EA++I +++
Sbjct: 583 TDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTEL 628
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 179/376 (47%), Gaps = 5/376 (1%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE-MG 61
++A C+ F +L + G + DV N ++ + ++ LL ++L G
Sbjct: 153 LEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFG 212
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV SYN+++ L + + ++M+ P TF+ ++ LC+N +
Sbjct: 213 CEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVH 272
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +HG P++ Y +I G+CK RL AR IL + G +PN + Y T++K
Sbjct: 273 EVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGL 332
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+++ +L+ M K D + ++ + G + + +EQM+ G D+
Sbjct: 333 CSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDV 392
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y T+IN +CKEG ++ A +LL M G + ++TI++ GLC A A +
Sbjct: 393 ITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQ 452
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M + G N +N +++ L K G ++ AI + + M V D +YS+++ L KA
Sbjct: 453 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGN 512
Query: 358 LPSASKLLLSCLKSGV 373
A +LL +K G+
Sbjct: 513 TDEALELLNVMVKKGM 528
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 155/349 (44%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ + ILNRM G+SP+VV YN+L+ G + LL EM +
Sbjct: 293 IIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKD 352
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P D ++N L+ L Q G D V + M+ P T+ ++NG CK D A+
Sbjct: 353 CPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAV 412
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ R + G P V+Y I++KGLC A R A ++ ++ G PN +T+ T++
Sbjct: 413 MLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFL 472
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + +E+L M G + D Y TVI K G EA + + MV G+ +
Sbjct: 473 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNT 532
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ Y+++ + EG++ + + ++ D + +I LCK G A L Y
Sbjct: 533 IIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAY 592
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVH 350
M G N Y ++ L +G + A + + K + M H
Sbjct: 593 MVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKGALRKHLMKH 641
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 131/296 (44%), Gaps = 35/296 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D CQ D +L +M E G PDV+TY ++I G + L+ ++ LL M
Sbjct: 362 ILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAAC 421
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ SY ++ L + +A + MI P TFN ++N LCK + A
Sbjct: 422 GCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQA 481
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + + +G P+L++Y+ +I GL KAG A +L + G +PN I Y++I
Sbjct: 482 IELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIA-- 539
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+A GR+ + E + V+ D
Sbjct: 540 ---------------------------------SALSGEGRINKVIQMFENIQDTTVRSD 566
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
V YN +I+ CK G+ + A L M G ++ T+TILI GL G +K A+
Sbjct: 567 AVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQ 622
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 165/382 (43%), Gaps = 40/382 (10%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
++P+ TY L+ ++ +L +LD+M G P Y+ + + A
Sbjct: 107 VAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAV 166
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL-QKHGFVPELVTYNILIKG 145
V +D+ N++L +C D A+R+ R L G P++V+YN +++G
Sbjct: 167 GVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRG 226
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LC A R + +++E+ +G PN +T++T++ RN ++ E+ + M G D
Sbjct: 227 LCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPD 286
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y T+I K RL+ A + +M + G+ ++V YNTL+ C + E A LL
Sbjct: 287 VRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLA 346
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM + D T IL+D LC ++G
Sbjct: 347 EMFDKDCPLDDVTFNILVDFLC-----------------------------------QNG 371
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+D I V E M + D TY+++++ CK + A LL S G R +
Sbjct: 372 LVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYT 431
Query: 382 AVVDGLRHSGCRREAKKIQSKI 403
V+ GL + +A+++ S++
Sbjct: 432 IVLKGLCSAERWVDAEELMSQM 453
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 200/406 (49%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+A C+ + TI+ ++ E+ +SPD TY S+I G R L +L + ++M + G
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y++L++ L G+ +EA + ++MI + P T + LC ++A
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+F ++ G P + TY LI GLC +G L+ A + + G PN +TY ++
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINIL 400
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
NR+ K +L+ M R G + + Y +I + +G K+A M M+ G ++
Sbjct: 401 VENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANL 460
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNT+I YC G +A +LD M G + D++++T LI G CK ++ A
Sbjct: 461 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNE 520
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G N Y ++D KD K+D A ++ E M+ + TY+ ++H L K
Sbjct: 521 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN 580
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A +L ++ G+ A++DGL +G A ++ +K+
Sbjct: 581 FSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 208/465 (44%), Gaps = 80/465 (17%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C+ D+ + N+M + G P+ VTY++LI G + ++ + DL+ EM+ G
Sbjct: 256 MILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHG 315
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM--------------------ICGDLT--- 98
I P + + L +G ++A R+F DM + G L
Sbjct: 316 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAI 375
Query: 99 ------------PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
P T T+N ++N L +NR A + + ++G P +VTYN +IKG
Sbjct: 376 GLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGY 435
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C G + A ++ + GH+ N +TY TI+K + L IL M+ G D
Sbjct: 436 CILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDE 495
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ Y +I F KI +++ A +MV DG+ + V+Y LI+ YCK+ KL+ A LL+
Sbjct: 496 WSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEH 555
Query: 267 MEK-----------------------------------QGFECDKYTHTILIDGLCKAGN 291
M++ +G + T+T +IDGLCK G+
Sbjct: 556 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS 615
Query: 292 IKGARLHLEYMNKI---GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 344
L LE NK+ G NL Y+ ++ LG++GK++ A N+F +E + D T
Sbjct: 616 TS---LALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEIT 672
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
Y M+ + ++ A L +K+G + ++ GL++
Sbjct: 673 YVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN 717
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 191/397 (48%), Gaps = 20/397 (5%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
+ L+ + ++G+ + Y++L+ +R + + +D ML G+ P++ YN++++ L
Sbjct: 166 SFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 225
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ G +A + + + +++P T T+ M+ G C+ D+AL++F + K G P
Sbjct: 226 CKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNT 285
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
VTY+ LI GLC +GR+ A +++E+ G P A T T + Y+ +
Sbjct: 286 VTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVD 345
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
MK KG + + Y +I+ G LK A +M DGV + V+YN LIN+ + +
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
++ A+++L+ M + G + T+ +I G C G+ K A L + M + G +NL YN
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 465
Query: 317 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
I+ G A+ + + M D ++Y+ ++ CK ++ SA L + G
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525
Query: 373 VRILKSAQKAVVDG----------------LRHSGCR 393
+ + A++DG ++ SGCR
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 180/374 (48%), Gaps = 11/374 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I YC ++N M + G S ++VTYN++I G + + +L +LD M + G
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD WSY L+ ++ K + A +F +M+ L P T+ +++G CK+ D A
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ +++ G P + TYN+LI GL K A + K + + G PN +TYT ++
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N L LE+ + M +G + Y ++I A + G+++EA + ++ G+ D
Sbjct: 611 CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 670
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL-- 299
++Y +I Y GK+E A+ L M K G + +T+ +LI GL + RL
Sbjct: 671 ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALP 730
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLP 359
+ + F + + K ++D ++V +V++ ++V NL A R
Sbjct: 731 DVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSV----QVQN-----ALVSNLSTAGRWF 781
Query: 360 SASKLLLSCLKSGV 373
A++LL S + G+
Sbjct: 782 EANELLGSMISQGL 795
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 151/345 (43%), Gaps = 21/345 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + +F + M E GI P+VVTY ++I G +N S +L++ ++M+E
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P++ +Y+SL+ L Q GK +EA +F ++ L P T+ M+ + ++A
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN-AITYTTIMK 179
+ K G P L TY +LIKGL L R L L D PN + Y T +
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQR--LAALPDV--VPNCSFGYQTTDQ 745
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK----IGRLKEATDYMEQMVTD 235
+ +S M K D V A V GR EA + + M++
Sbjct: 746 ------------DAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQ 793
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G+ D +YN+L+ + ++ A + M QG E + LI LC+ K A
Sbjct: 794 GLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEA 853
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
R+ E M ++ + ++D L +DG D + ME +
Sbjct: 854 RITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 898
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 76/161 (47%)
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++K C + L + + G F Y ++ ++G D +M+++G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
VQ +++ YN +IN CK+G + A ++ ++ + D +T+T +I G C+ ++ A
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M K G + N Y+ +++ L G+++ A ++ M
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 311
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 94/237 (39%), Gaps = 25/237 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS------------- 48
+I+AY + + L RM +AG P + TY LI G LL+
Sbjct: 676 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPN 735
Query: 49 CSLD-----------LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 97
CS + ++ E+ V N+L+ L G+ EAN + MI L
Sbjct: 736 CSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGL 795
Query: 98 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 157
P +N +L L + R D A+ +F+ + G L Y LI LC+ R + AR
Sbjct: 796 CPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARI 855
Query: 158 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
+ + P+ + ++ R+ L +E L M+ + Y F T++A
Sbjct: 856 TFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRY-MPSFHIYTILA 911
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 56/131 (42%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L M G+ PD YNSL+ R + ++ + M G + Y L+ L
Sbjct: 786 LLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALC 845
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
QL + EA F++M+ P ++++GL ++ Y D + ++ ++P
Sbjct: 846 QLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFH 905
Query: 138 TYNILIKGLCK 148
Y IL + K
Sbjct: 906 IYTILAREASK 916
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 187/391 (47%), Gaps = 6/391 (1%)
Query: 25 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM--LEMGIPPDVWSYNSLMHCLFQLGKP 82
AG PD +N + L +L +L M E PPD +SYN ++ L++ GK
Sbjct: 152 AGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKG 211
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
+A +VF +M+ + P T+N M++G K + R+ + + G P +VTYN+L
Sbjct: 212 SDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVL 271
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
+ GLC+AGR+ R ++ E+ P+ TY+ + R + L + +KG
Sbjct: 272 LSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGV 331
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
+ ++ K G++ +A +E +V G+ YNTLIN YC+ L+ A+
Sbjct: 332 IIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFS 391
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
+ ++M+ + D T+ LI+GLCK I A + M K G D ++E +N ++D G
Sbjct: 392 IFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYG 451
Query: 323 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
+ G+++ V M+ K + ++ S+V CK ++P A +L + V
Sbjct: 452 RAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQ 511
Query: 379 AQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+++D SG +A + K++ + +S
Sbjct: 512 VYNSIIDAYIESGGTEQAFLLVEKMKSSGVS 542
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 178/361 (49%), Gaps = 4/361 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + M + G++P+ +TYN++I G + L L D+ML+ G P+V +YN L+ L
Sbjct: 217 VFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLC 276
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G+ DE + +M + P T++I+ +GL + + L +F K G +
Sbjct: 277 RAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAY 336
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T +IL+ GLCK G++ A +L+ L +G P Y T++ + R + I M
Sbjct: 337 TCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQM 396
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K + D Y +I K+ + EA D + +M GV + ++NTLI+ Y + G+L
Sbjct: 397 KSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQL 456
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
E + +L +M+ +G + + + ++ CK G I A L+ M N + YN I
Sbjct: 457 EKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSI 516
Query: 318 VDRLGKDGKIDHAINVFESME---VKDS-FTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+D + G + A + E M+ V S FTY+ ++ LCK ++ A +L+ + G+
Sbjct: 517 IDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGL 576
Query: 374 R 374
R
Sbjct: 577 R 577
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 190/396 (47%), Gaps = 39/396 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID + + +AG+ + ++M + G P+VVTYN L++G R + + L+DEM
Sbjct: 236 MIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYS 295
Query: 62 IPPDVWSYNSL------------MHCLF-----------------------QLGKPDEAN 86
+ PD ++Y+ L M LF + GK +A
Sbjct: 296 MLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAE 355
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+V + ++ L P TA +N ++NG C+ R A +F ++ P+ +TYN LI GL
Sbjct: 356 QVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGL 415
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK + A ++ E+ SG P+ T+ T++ R + + +LS M+ KG +
Sbjct: 416 CKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNV 475
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ +V+ AF K G++ EA ++ M+ V + YN++I+ Y + G E A+LL+++
Sbjct: 476 ISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEK 535
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+ G +T+ +L+ GLCK I A + + G ++ +YN I+ G
Sbjct: 536 MKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGD 595
Query: 327 IDHAINVFESM---EVKDSF-TYSSMVHNLCKAKRL 358
D A+ + + M +++ + TY ++ L A R+
Sbjct: 596 TDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRV 631
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 126/260 (48%), Gaps = 6/260 (2%)
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+P L + N+L++ L GR R L +G P+ + ++ C L
Sbjct: 120 LPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALA 179
Query: 193 ILSAMKRK--GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+L M R D F Y VIA + G+ +A ++MV GV + ++YNT+I+
Sbjct: 180 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDG 239
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+ K G LEA + L D+M + G + + T+ +L+ GLC+AG + R ++ M +
Sbjct: 240 HVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPD 299
Query: 311 LEAYNCIVDRLGKDGKIDHAINVF-ESME---VKDSFTYSSMVHNLCKAKRLPSASKLLL 366
Y+ + D L + G +++F ES++ + ++T S +++ LCK ++ A ++L
Sbjct: 300 GFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLE 359
Query: 367 SCLKSGVRILKSAQKAVVDG 386
+ +G+ + +++G
Sbjct: 360 MLVHTGLVPTTAIYNTLING 379
>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
Length = 428
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 187/371 (50%), Gaps = 7/371 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ DA +L +M +AG +P+VVTY +LI G + ++ + ML G
Sbjct: 51 LIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSG 110
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQD-MICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PD+ +YNSL+H L + D+A V Q+ MI P T+N ++GLCK D
Sbjct: 111 CEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKG 170
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L M + + G P++VT+ +I GLCKA R+ A + K + + G P+++TY+ ++
Sbjct: 171 LEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDN 230
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + E+L M + G+ Y +I A ++ G ++ A+ EQ + G ++
Sbjct: 231 LSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVME 290
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
+ ++N I C+ GK A +L M + G + ++ +IDGLCK+GN+ A +L
Sbjct: 291 VYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSR 350
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-----DSFTYSSMVHNLCK 354
+ ++ ++ +N ++ K G++ A + + M+ K D TY++M+ K
Sbjct: 351 KMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSK 410
Query: 355 AKRLPSASKLL 365
L A LL
Sbjct: 411 FGSLKQAKLLL 421
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 177/370 (47%), Gaps = 6/370 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ +L+ M G VVTY +LI G ++ L + LL +M + G
Sbjct: 16 LIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAG 75
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC-KNRYTDNA 120
P+V +Y +L+ L + +P +A + + M+ P T+N +++GLC NR D
Sbjct: 76 CAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAG 135
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + + G +P++VTYN I GLCKAG+L +L+E+ G +P+ +T+ +I+
Sbjct: 136 LVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISG 195
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + ++ M +G D Y ++ + RL + +E MV G
Sbjct: 196 LCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYAL 255
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y LI+ + G +E+A ++ + G + YTH I LC++G A+ L
Sbjct: 256 SATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILL 315
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-----VKDSFTYSSMVHNLCKA 355
M + G NL +YN ++D L K G +D A + M D +++++ CKA
Sbjct: 316 GMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKA 375
Query: 356 KRLPSASKLL 365
RL A +LL
Sbjct: 376 GRLSQAQQLL 385
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 171/348 (49%), Gaps = 5/348 (1%)
Query: 30 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 89
D YN+LIAG + +L+LL M G V +Y +L+ L + G D A +
Sbjct: 9 DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68
Query: 90 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
Q M P T+ +++GLCK R +A++ + + + G P+LVTYN LI GLC A
Sbjct: 69 QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA 128
Query: 150 GRLRTARWILKELG-DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
R+ A +L+EL +SG P+ +TY T + + K GLE+L M R G + D
Sbjct: 129 NRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVT 188
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
+C++I+ K R+ +A + M+ G D ++Y+ +++ + +L+ +L+ M
Sbjct: 189 FCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMV 248
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
K G T+ LI L +AG+I+ A E + G + +N + L + GK
Sbjct: 249 KSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFP 308
Query: 329 HAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
A N+ ES + + +Y+ ++ LCK+ + A KL L SG
Sbjct: 309 LAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSG 356
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 154/343 (44%), Gaps = 73/343 (21%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG-ATRNSLLSCSLDLLDEMLEM 60
LID C+ + RM +G PD+VTYNSLI G N + L L + M+E
Sbjct: 86 LIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIES 145
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +YN+ + L + GK D+ + ++M G ++P TF +++GLCK D+A
Sbjct: 146 GRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDA 205
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F+G+ + G VP+ +TY+I++ L +A RL T +L+ + SGH + TY ++
Sbjct: 206 FQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHA 265
Query: 181 CF-----------------------------------RNRKYKLGLEILSAMKRKG---- 201
R+ K+ L IL M G
Sbjct: 266 LIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPN 325
Query: 202 -----YTFDGF-------------------GYC--------TVIAAFVKIGRLKEATDYM 229
+ DG G C T+I+ F K GRL +A +
Sbjct: 326 LLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLL 385
Query: 230 EQMVTDGVQL-DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
++M + + D+V+YNT+I+ K G L+ A LLL+EM+ G
Sbjct: 386 KEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 5/182 (2%)
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M + + D Y T+IA K + + A + + M +G +V+Y TLI+ CK G
Sbjct: 1 MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
L+AA LL +M G + T+T LIDGLCKA A ++ M + G + +L YN
Sbjct: 61 LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120
Query: 317 IVDRLGKDGKIDHAINVF-----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++ L ++D A V ES + D TY++ + LCKA +L ++L +
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180
Query: 372 GV 373
G+
Sbjct: 181 GI 182
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 185/378 (48%), Gaps = 6/378 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ + F+ ++ M + G+ TYN LI G +L+ +L L +EM+
Sbjct: 274 VLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLK 333
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P V +YNS ++ L +LG+ +A + DM+ +L P ++N ++ G C+ A
Sbjct: 334 GASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKA 393
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F L+ P +VTYN L+ GLC+ G L A+ + E+ + G AP+ +TYT ++
Sbjct: 394 FLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNG 453
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + E M +G D + Y T I +K+G A E+M+ G D
Sbjct: 454 SCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPD 513
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHL 299
++ YN +++ CK G LE A LL +M G D T+T +I + G + KG +
Sbjct: 514 LIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFY 573
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
E ++K G ++ Y ++ G+++ A F M+ K + TY+S+++ LCK
Sbjct: 574 EMLSK-GLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKV 632
Query: 356 KRLPSASKLLLSCLKSGV 373
+R+ A ++ G+
Sbjct: 633 RRMDQAYNFFAEMVEKGI 650
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 165/327 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI YC+ + + + + +R + P +VTYN+L+ G R L + L EM+ G
Sbjct: 380 LIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG 439
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+ +Y L++ ++G A F +M+ L + + + G K T A
Sbjct: 440 IAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAF 499
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + GF P+L+ YN+++ GLCK G L A +L+++ G P+ +TYT+I+
Sbjct: 500 SLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAH 559
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N + + G EI M KG T Y +I GRL+ A Y +M G+ ++
Sbjct: 560 LENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNV 619
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN+LIN CK +++ AY EM ++G +KY++TILI+ C GN + A +
Sbjct: 620 ITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQ 679
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKID 328
M G + ++ ++ +LGKD K+
Sbjct: 680 MLDRGVQPDSCTHSALLKQLGKDCKLQ 706
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 173/372 (46%), Gaps = 6/372 (1%)
Query: 37 LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 96
LI ++ S++ L + D+M++ + PDV + N ++ L +A V++ M
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 229
Query: 97 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 156
+ P T+N +L+ CK L + +Q+ G P VTYN+LI GL K G A+
Sbjct: 230 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAK 289
Query: 157 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 216
++ E+ +G +A TY ++ F L + M KG + Y + I
Sbjct: 290 GLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGL 349
Query: 217 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
K+GR+ +A + M+ + + D+VSYNTLI YC+ G L A+LL DE+
Sbjct: 350 CKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTI 409
Query: 277 YTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
T+ L+DGLC+ G ++ A +L +E +N+ G ++ Y +V+ K G + A F+
Sbjct: 410 VTYNTLLDGLCRQGELEVAQQLKVEMINE-GIAPDIVTYTILVNGSCKMGSLSMAQEFFD 468
Query: 336 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
M + DS+ Y++ + K A L L G VVDGL G
Sbjct: 469 EMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLG 528
Query: 392 CRREAKKIQSKI 403
EA ++ K+
Sbjct: 529 NLEEASELLQKM 540
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 191/404 (47%), Gaps = 6/404 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI Y + + ++ ++M ++ +SPDV N ++ L+S ++++ M E
Sbjct: 169 LLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 228
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P + +YN+L+ + GK + + +M P T+N+++NGL K + A
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K G TYN LI G G L A + +E+ G +P TY + +
Sbjct: 289 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYG 348
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + ++ LS M D Y T+I + ++G L +A +++ + +
Sbjct: 349 LCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPT 408
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+YNTL++ C++G+LE A L EM +G D T+TIL++G CK G++ A+ +
Sbjct: 409 IVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFD 468
Query: 301 YMNKIGFDSNLEAYNC-IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
M G + + AY IV L K G A ++ E M K D Y+ +V LCK
Sbjct: 469 EMLHEGLELDSYAYATRIVGEL-KLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKL 527
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L AS+LL + GV +++ +G R+ ++I
Sbjct: 528 GNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREI 571
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 120/261 (45%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ C+ S + M G+ D Y + I G + S + L +EML
Sbjct: 449 ILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAK 508
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PPD+ YN ++ L +LG +EA+ + Q M+ + P T+ +++ +N
Sbjct: 509 GFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKG 568
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G P +VTY +LI G GRL A E+ + G PN ITY +++
Sbjct: 569 REIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLING 628
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ R+ + M KG + + Y +I +G +EA +QM+ GVQ D
Sbjct: 629 LCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPD 688
Query: 241 IVSYNTLINLYCKEGKLEAAY 261
+++ L+ K+ KL+A +
Sbjct: 689 SCTHSALLKQLGKDCKLQAVH 709
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 203/429 (47%), Gaps = 27/429 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ +C +++LN M+ I+PDV T+N+LI + + + +L M++
Sbjct: 244 LVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKAC 303
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV +YNSL+ F L K A VF M +TP T+ M++GLCK + D A+
Sbjct: 304 IKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAM 363
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ +P++VTY LI GLCK L A + K++ + G P+ +YT ++
Sbjct: 364 SLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDAL 423
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + E + KGY + Y +I K EA D +M G D
Sbjct: 424 CKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDA 483
Query: 242 VSYNTLI-NLYCKEG----------------------KLEAAYLLLDEMEKQGFECDKYT 278
+++ T+I L+ K+ +L+ A ++L M K + D T
Sbjct: 484 ITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVT 543
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+ L+DG +K A+ M ++G N++ Y ++D L K +D A+++FE M+
Sbjct: 544 YGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMK 603
Query: 339 VKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
K+ F TY+S++ LCK L A LL + G++ + ++DGL SG
Sbjct: 604 HKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLE 663
Query: 395 EAKKIQSKI 403
AK+I ++
Sbjct: 664 GAKEIFQRL 672
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 197/399 (49%), Gaps = 27/399 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ D ++ M+ + PD+VTY SLI G +N L ++ L +M E G
Sbjct: 349 MIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQG 408
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV+SY L+ L + G+ + A FQ ++ T+N+M+NGLCK A+
Sbjct: 409 IQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAM 468
Query: 122 RMFRGLQKHGFVPELVTYNILI---------------------KGLCKAG--RLRTARWI 158
+ ++ G +P+ +T+ +I +GL +A RL+ A+ +
Sbjct: 469 DLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIV 528
Query: 159 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 218
L + + P+ +TY T+M F + K + +M + G T + Y +I K
Sbjct: 529 LAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCK 588
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
+ EA E+M + +IV+Y +LI+ CK LE A LL EM++ G + D Y+
Sbjct: 589 KKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYS 648
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+TIL+DGLCK+G ++GA+ + + G+ N++ Y +++ L K G D A+++ ME
Sbjct: 649 YTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKME 708
Query: 339 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
K D+ T+ ++ L + A K+L + G+
Sbjct: 709 DKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGL 747
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 205/430 (47%), Gaps = 27/430 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LIDA + A +L M +A I PDVVTYNSLI G + + + + M + G
Sbjct: 279 LIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSG 338
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V +Y +++ L + DEA +F++M ++ P T+ +++GLCKN + + A+
Sbjct: 339 VTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAI 398
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +++ G P++ +Y IL+ LCK GRL A+ + L G+ N TY ++
Sbjct: 399 ALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGL 458
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF-----------------------VK 218
+ + +++ S M+ KG D + T+I A +
Sbjct: 459 CKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEAR 518
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
RLKEA + M ++ D+V+Y TL++ Y +L+ A + M + G +
Sbjct: 519 KVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQC 578
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+TI+IDGLCK + A E M N+ Y ++D L K+ ++ AI + + M+
Sbjct: 579 YTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMK 638
Query: 339 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
D ++Y+ ++ LCK+ RL A ++ L G + A+++ L +G
Sbjct: 639 EHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFD 698
Query: 395 EAKKIQSKIR 404
EA +Q K+
Sbjct: 699 EALDLQXKME 708
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 182/368 (49%), Gaps = 4/368 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ +C +++L + + G P+ +T N+LI G + +L D+++
Sbjct: 103 ILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQ 162
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G + SY +L++ L + G+ R+ + + + P +N +++ LCKN+ +A
Sbjct: 163 GFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDA 222
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G P +VTYN L+ G C G L+ A +L E+ P+ T+ T++
Sbjct: 223 CDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDA 282
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K K +L+ M + D Y ++I + + ++K A M GV +
Sbjct: 283 LGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPN 342
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +Y T+I+ CKE ++ A L +EM+ + D T+T LIDGLCK +++ A +
Sbjct: 343 VRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCK 402
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + G ++ +Y ++D L K G++++A F+ + VK + TY+ M++ LCKA
Sbjct: 403 KMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKAD 462
Query: 357 RLPSASKL 364
A L
Sbjct: 463 LFGEAMDL 470
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 177/377 (46%), Gaps = 39/377 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ A +L ++ + PDVV YN++I +N LL + DL EM+ G
Sbjct: 174 LINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKG 233
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V +YN+L++ +G EA + +M ++ P TFN +++ L K A
Sbjct: 234 ISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAK 293
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K P++VTYN LI G +++ A+++ + SG PN TYT
Sbjct: 294 IVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYT------ 347
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
T+I K + EA E+M + DI
Sbjct: 348 -----------------------------TMIDGLCKEKMVDEAMSLFEEMKYKNMIPDI 378
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y +LI+ CK LE A L +M++QG + D Y++TIL+D LCK G ++ A+ +
Sbjct: 379 VTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQR 438
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
+ G+ N++ YN +++ L K A+++ ME K D+ T+ +++ L +
Sbjct: 439 LLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDE 498
Query: 358 LPSASKLLLSCLKSGVR 374
A K+L + G++
Sbjct: 499 NDKAEKILREMIARGLQ 515
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 175/389 (44%), Gaps = 4/389 (1%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
+RM P +N +++ N + L + G PD+ + N LM+C
Sbjct: 51 FDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCH 110
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
L A V +++ P T N ++ GLC AL + GF V+
Sbjct: 111 LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS 170
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
Y LI GLCK G + +L++L P+ + Y TI+ +N+ ++ S M
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI 230
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
KG + + Y ++ F +G LKEA + +M + D+ ++NTLI+ KEGK++
Sbjct: 231 VKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMK 290
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
AA ++L M K + D T+ LIDG +K A+ M + G N+ Y ++
Sbjct: 291 AAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMI 350
Query: 319 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
D L K+ +D A+++FE M+ K D TY+S++ LCK L A L + G++
Sbjct: 351 DGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ 410
Query: 375 ILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ ++D L G AK+ ++
Sbjct: 411 PDVYSYTILLDALCKGGRLENAKEFFQRL 439
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 184/392 (46%), Gaps = 4/392 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + G +PD+ T N L+ + ++ + +L +L+ G P+ + N+L+ L
Sbjct: 84 SLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGL 143
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
G+ +A ++ ++ ++NGLCK T R+ R L+ H P++
Sbjct: 144 CFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDV 203
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
V YN +I LCK L A + E+ G +PN +TY ++ K +L+
Sbjct: 204 VMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNE 263
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
MK K D + T+I A K G++K A + M+ ++ D+V+YN+LI+ Y K
Sbjct: 264 MKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNK 323
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
++ A + M + G + T+T +IDGLCK + A E M ++ Y
Sbjct: 324 VKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTS 383
Query: 317 IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++D L K+ ++ AI + + M+ + D ++Y+ ++ LCK RL +A + L G
Sbjct: 384 LIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKG 443
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ +++GL + EA ++SK+
Sbjct: 444 YHLNVQTYNVMINGLCKADLFGEAMDLKSKME 475
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 138/309 (44%), Gaps = 23/309 (7%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+DA C+ + R+ G +V TYN +I G + L ++DL +M
Sbjct: 418 ILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGK 477
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT---------------------- 98
G PD ++ +++ LF+ + D+A ++ ++MI L
Sbjct: 478 GCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACI 537
Query: 99 -PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 157
P T+ +++G +A +F + + G P + Y I+I GLCK + A
Sbjct: 538 KPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMS 597
Query: 158 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 217
+ +E+ PN +TYT+++ +N + + +L MK G D + Y ++
Sbjct: 598 LFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLC 657
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 277
K GRL+ A + ++++ G L++ Y +IN CK G + A L +ME +G D
Sbjct: 658 KSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAV 717
Query: 278 THTILIDGL 286
T I+I L
Sbjct: 718 TFDIIIWAL 726
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 129/295 (43%), Gaps = 23/295 (7%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ F + ++M G PD +T+ ++I + +L EM+
Sbjct: 453 VMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIAR 512
Query: 61 G-----------------------IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 97
G I PDV +Y +LM F + + A VF M +
Sbjct: 513 GLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGV 572
Query: 98 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 157
TP + IM++GLCK + D A+ +F ++ P +VTY LI LCK L A
Sbjct: 573 TPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIA 632
Query: 158 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 217
+LKE+ + G P+ +YT ++ ++ + + EI + KGY + Y +I
Sbjct: 633 LLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELC 692
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
K G EA D +M G D V+++ +I ++ + + A +L EM +G
Sbjct: 693 KAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGL 747
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 4/207 (1%)
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
F + ++++ V ++ ++G D+ + N L+N +C + A+ +L
Sbjct: 64 FHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLAN 123
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
+ K+G+ + T LI GLC G IK A + + GF N +Y +++ L K G+
Sbjct: 124 ILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGE 183
Query: 327 IDHAINVFESME---VK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+ +E VK D Y++++H+LCK K L A L + G+ A
Sbjct: 184 TKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNA 243
Query: 383 VVDGLRHSGCRREAKKIQSKIRMAKIS 409
+V G G +EA + +++++ I+
Sbjct: 244 LVYGFCIMGHLKEAFSLLNEMKLKNIN 270
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 196/418 (46%), Gaps = 30/418 (7%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD------ 55
L+ +YC + Y +LNRM G P V YN I L S DLLD
Sbjct: 183 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLP-SPDLLDLAEKIY 241
Query: 56 -EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
EML + + + CL +GK D+A ++ ++M+ P T+T++ ++ LC
Sbjct: 242 GEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHA 301
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
+ A +F+ ++ G P++ TY ILI CKAG + A+W+ +E+ G +P +TY
Sbjct: 302 TKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTY 361
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV- 233
T ++ + ++ +I M G + Y ++ K G + +A + +++
Sbjct: 362 TALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIG 421
Query: 234 -TDGVQLD--------------IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
+D D +V+Y L++ CK K++ A+ LLD M G E +
Sbjct: 422 TSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIV 481
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+ LIDG CKAG I A+ M K G+ ++ Y ++DR+ KDG++D A+ V M
Sbjct: 482 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM- 540
Query: 339 VKDS-----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+KDS TY++M+ LC+ A KLL + G A++DGL +G
Sbjct: 541 LKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAG 598
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 184/384 (47%), Gaps = 22/384 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID++C+ + + MR G SP VVTY +LI + + + D+ M++
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-------------CGD---LTPCTATF 104
G P+ +Y +L+ L + G +A V+ +I C D L P T+
Sbjct: 388 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447
Query: 105 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 164
+++GLCK D+A + + G P + Y+ LI G CKAG++ +A+ + ++
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
G+ P+ TYT+++ F++ + L +++LS M + T + Y +I +IG ++
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 567
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A + M G ++V+Y LI+ K GK++ + L +M ++G + T+ +LI+
Sbjct: 568 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLIN 627
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VK 340
LC AG + ARL L M + + L+ Y C + K ++ + E ME V
Sbjct: 628 HLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEEMESYGTVP 685
Query: 341 DSFTYSSMVHNLCKAKRLPSASKL 364
+ Y ++ KA RL A +L
Sbjct: 686 IAPVYGMLIDCFSKAGRLEIAMEL 709
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 164/336 (48%), Gaps = 8/336 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+ D + +L+ M +G P+ + Y++LI G + + + ++ +M + G
Sbjct: 450 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 509
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y SL+ +F+ G+ D A +V M+ TP T+ M++GLC+ ++ AL
Sbjct: 510 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 569
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-C 180
++ +++ G P +VTY LI GL KAG++ + + ++ G +PN +TY ++
Sbjct: 570 KLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 629
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C K L +L MK+ + GY I F K + +E+M + G
Sbjct: 630 CAAGLLDKARL-LLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEEMESYGTVPI 686
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEK--QGFECDKYTHTILIDGLCKAGNIKGA-RL 297
Y LI+ + K G+LE A L EM + + D + LI LC A ++ A RL
Sbjct: 687 APVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRL 746
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
+ E M + GF L + C++ L + K D A+ +
Sbjct: 747 YSE-MTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 174/395 (44%), Gaps = 15/395 (3%)
Query: 20 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 79
+ +++ G P VTYN+L+ + + + EM E G D ++ H L +
Sbjct: 29 DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88
Query: 80 GK-PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
G+ D + + ++ D CT M++GL + Y D A+ ++ + +P +VT
Sbjct: 89 GRWADALDMIEREDFKLDTVLCTH----MISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
Y L+ G K +L + I+ + G PN + +++ + Y ++L+ M
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKE------ATDYMEQMVTDGVQLDIVSYNTLINLYC 252
G Y I + +L A +M+ L+ V+ C
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 264
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
GK + A+ L+ EM ++GF D T++ +I LC A ++ A L + M +G ++
Sbjct: 265 GVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVY 324
Query: 313 AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
Y ++D K G I+ A +FE M TY++++H KAK++P A+ +
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 384
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ +G R A+VDGL +G +A ++ +K+
Sbjct: 385 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 419
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 167/445 (37%), Gaps = 58/445 (13%)
Query: 13 DAGYTILNRMREAG--------------------------------ISPDVVTYNSLIAG 40
D G+ + M E+G D V +I+G
Sbjct: 57 DLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISG 116
Query: 41 ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPC 100
S ++ L M P+V +Y +L+ + + R+ M+ P
Sbjct: 117 LMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPN 176
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT------ 154
+ FN +++ C + A ++ + G P V YNI I +C +L +
Sbjct: 177 PSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDL 236
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
A I E+ + N + +C K+ +++ M RKG+ D Y VI
Sbjct: 237 AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 296
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
++++A ++M GV D+ +Y LI+ +CK G +E A L +EM G
Sbjct: 297 FLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSP 356
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
T+T LI KA + A M G N Y +VD L K G I A V+
Sbjct: 357 TVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVY 416
Query: 335 ESM----EVKDS----------------FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
+ + DS TY ++V LCKA ++ A +LL + L SG
Sbjct: 417 AKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCE 476
Query: 375 ILKSAQKAVVDGLRHSGCRREAKKI 399
A++DG +G A+++
Sbjct: 477 PNHIVYDALIDGFCKAGKIDSAQEV 501
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 108/241 (44%), Gaps = 10/241 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ + +L+ M E G SP+VVTY +LI G + + SLDL +M G
Sbjct: 555 MIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 614
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y L++ L G D+A + +M + + G K+ +L
Sbjct: 615 CSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIA--SL 672
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI-----TYTT 176
+ ++ +G VP Y +LI KAGRL A + KE+ + P+++ Y +
Sbjct: 673 GILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME---VPSSVKTDNDMYAS 729
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
+++ + + + S M R+G+ + + +I V++ + EA + +G
Sbjct: 730 LIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEG 789
Query: 237 V 237
V
Sbjct: 790 V 790
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C D +L M++ + Y I G +++ + SL +L+EM
Sbjct: 624 VLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFI--ASLGILEEMESY 681
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM----LNGLCKNRY 116
G P Y L+ C + G+ + A + ++M+ ++ T N M + LC
Sbjct: 682 GTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMM--EVPSSVKTDNDMYASLIQALCLASQ 739
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 155
+ A R++ + + GFVPEL + LIKGL + + A
Sbjct: 740 VEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEA 778
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 73/175 (41%), Gaps = 11/175 (6%)
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A D + + G + V+YN L+ + G+++ + + EM + GF D++T
Sbjct: 24 AGDSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAH 83
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VK 340
LCK G A L+ + + F + ++ L + D A++ M +
Sbjct: 84 ALCKEGRWADA---LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIP 140
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
+ TY +++ K K+L +++ + G + ++ + L HS C +
Sbjct: 141 NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGC----NPNPSLFNSLVHSYCNEK 191
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 178/349 (51%), Gaps = 5/349 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ + ++ +M PD +TY ++ + + +L ++EM G
Sbjct: 86 IINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCKTKRIDDALATVEEMATRG 144
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD + YN ++ L Q K +EA +F+ M+ + P T+N ++NGLCK + A
Sbjct: 145 IKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAY 204
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ + G+VP V+YN LI G CK L A+ + ++ S PN +TYTT++
Sbjct: 205 ELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGL 264
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ K + E+L M +KG T + Y +I F K+ R+ EA +EQMVT G+ +
Sbjct: 265 SKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTV 324
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLE 300
V+YN L+N C+ KLE A+ L M ++ T+ L+ LC + GA RL+ E
Sbjct: 325 VTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAE 384
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV--KDSFTYSS 347
+ K G + Y+ + L + GK+ A + E M++ ++ F SS
Sbjct: 385 MIAK-GCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNPFGRSS 432
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 180/390 (46%), Gaps = 5/390 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M EAG + Y LI+ + + LL M +Y+++++ L +L +
Sbjct: 36 MVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNR 95
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
+EA + + M P T+ ++ LCK + D+AL + G P+ YN
Sbjct: 96 VEEARELIEKM-ARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNF 154
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
++ GLC+ ++ AR + +++ PN +TY T++ + + + E+ M KG
Sbjct: 155 VLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKG 214
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
Y Y T+I F K L A D ++MV ++V+Y TLI+ K GK++AA
Sbjct: 215 YVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAA 274
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+LD M K+G + T++ LIDG CK + A LE M G + YN +++ L
Sbjct: 275 EVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSL 334
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
+ K++ A +F M + TY++++ LC K+L A +L + G
Sbjct: 335 CRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDA 394
Query: 378 SAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
+ GL +G EA+++ K+++ K
Sbjct: 395 ITYDTLAWGLTRAGKVHEAQELMEKMKLTK 424
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 158/314 (50%), Gaps = 5/314 (1%)
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
P ++N++ + G+ ++ V+Q M+ T + + I+++ LCK D A ++
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
++ F + + Y+ +I LCK R+ AR +++++ P+A+TY I++ +
Sbjct: 68 LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCK 126
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
++ L + M +G D F Y V++ + +++EA E+MV + ++V+
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
YNTLIN CK ++E AY L EM +G+ + ++ LIDG CK ++ A+ + M
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 246
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLP 359
+ N+ Y ++D L K GK+ A V + M K + TYS ++ CK +R+
Sbjct: 247 RSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVD 306
Query: 360 SASKLLLSCLKSGV 373
A KLL + G+
Sbjct: 307 EAHKLLEQMVTQGI 320
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 143/295 (48%), Gaps = 5/295 (1%)
Query: 97 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 156
+ P ATFN + +G K + +++G+ + G+ Y ILI LCK G A
Sbjct: 6 VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65
Query: 157 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 216
+L + AI Y+TI+ + + + E++ M R D Y ++
Sbjct: 66 KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPP-DALTYGPIVERL 124
Query: 217 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
K R+ +A +E+M T G++ D YN +++ C+E K+E A LL ++M KQ +
Sbjct: 125 CKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNV 184
Query: 277 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
T+ LI+GLCKA I+ A + M G+ +YN ++D K + A +VF+
Sbjct: 185 VTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDK 244
Query: 337 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
M V + TY++++ L K+ ++ +A+++L +K GV + ++DG
Sbjct: 245 MVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 132/271 (48%), Gaps = 5/271 (1%)
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+P T+N + G KAGRL + + + + ++G+ A Y ++ C + + +
Sbjct: 7 IPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYK 66
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+L M+ K + Y T+I K+ R++EA + +E+M D ++Y ++ C
Sbjct: 67 LLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPP-DALTYGPIVERLC 125
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K +++ A ++EM +G + D + + ++ GLC+ ++ ARL E M K + N+
Sbjct: 126 KTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVV 185
Query: 313 AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
YN +++ L K +I+ A +F+ M V +Y++++ CK K L +A +
Sbjct: 186 TYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM 245
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
++S ++DGL SG + A ++
Sbjct: 246 VRSNCVPNVVTYTTLIDGLSKSGKVQAAAEV 276
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 3/170 (1%)
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
++NT+ + + K G+LE + M + G+ + ILI LCK GN A L M
Sbjct: 12 TFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTM 71
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYSSMVHNLCKAKRLP 359
F AY+ I++ L K +++ A + E M D+ TY +V LCK KR+
Sbjct: 72 RLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLCKTKRID 131
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
A + G++ V+ GL EA+ + K+ +I+
Sbjct: 132 DALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRIN 181
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+++ C+ + + + M + P VVTYN+L+ + L + L EM+
Sbjct: 329 ILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAK 388
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
G PPD +Y++L L + GK EA + + M
Sbjct: 389 GCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 196/418 (46%), Gaps = 30/418 (7%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD------ 55
L+ +YC + Y +LNRM G P V YN I L S DLLD
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLP-SPDLLDLAEKIY 176
Query: 56 -EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
EML + + + CL +GK D+A ++ ++M+ P T+T++ ++ LC
Sbjct: 177 GEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHA 236
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
+ A +F+ ++ G P++ TY ILI CKAG + A+W+ +E+ G +P +TY
Sbjct: 237 TKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTY 296
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV- 233
T ++ + ++ +I M G + Y ++ K G + +A + +++
Sbjct: 297 TALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIG 356
Query: 234 -TDGVQLD--------------IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
+D D +V+Y L++ CK K++ A+ LLD M G E +
Sbjct: 357 TSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIV 416
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+ LIDG CKAG I A+ M K G+ ++ Y ++DR+ KDG++D A+ V M
Sbjct: 417 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM- 475
Query: 339 VKDS-----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+KDS TY++M+ LC+ A KLL + G A++DGL +G
Sbjct: 476 LKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAG 533
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 184/384 (47%), Gaps = 22/384 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID++C+ + + MR G SP VVTY +LI + + + D+ M++
Sbjct: 263 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 322
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-------------CGD---LTPCTATF 104
G P+ +Y +L+ L + G +A V+ +I C D L P T+
Sbjct: 323 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 382
Query: 105 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 164
+++GLCK D+A + + G P + Y+ LI G CKAG++ +A+ + ++
Sbjct: 383 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 442
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
G+ P+ TYT+++ F++ + L +++LS M + T + Y +I +IG ++
Sbjct: 443 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 502
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A + M G ++V+Y LI+ K GK++ + L +M ++G + T+ +LI+
Sbjct: 503 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLIN 562
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VK 340
LC AG + ARL L M + + L+ Y C + K ++ + E ME V
Sbjct: 563 HLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEEMESYGTVP 620
Query: 341 DSFTYSSMVHNLCKAKRLPSASKL 364
+ Y ++ KA RL A +L
Sbjct: 621 IAPVYGMLIDCFSKAGRLEIAMEL 644
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 164/336 (48%), Gaps = 8/336 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+ D + +L+ M +G P+ + Y++LI G + + + ++ +M + G
Sbjct: 385 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 444
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y SL+ +F+ G+ D A +V M+ TP T+ M++GLC+ ++ AL
Sbjct: 445 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 504
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-C 180
++ +++ G P +VTY LI GL KAG++ + + ++ G +PN +TY ++
Sbjct: 505 KLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 564
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C K L +L MK+ + GY I F K + +E+M + G
Sbjct: 565 CAAGLLDKARL-LLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEEMESYGTVPI 621
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEK--QGFECDKYTHTILIDGLCKAGNIKGA-RL 297
Y LI+ + K G+LE A L EM + + D + LI LC A ++ A RL
Sbjct: 622 APVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRL 681
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
+ E M + GF L + C++ L + K D A+ +
Sbjct: 682 YSE-MTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 716
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 159/396 (40%), Gaps = 26/396 (6%)
Query: 30 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 89
D V +I+G S ++ L M P+V +Y +L+ + + R+
Sbjct: 41 DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRII 100
Query: 90 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
M+ P + FN +++ C + A ++ + G P V YNI I +C
Sbjct: 101 NMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQ 160
Query: 150 GRLRT------ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
+L + A I E+ + N + +C K+ +++ M RKG+
Sbjct: 161 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 220
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y VI ++++A ++M GV D+ +Y LI+ +CK G +E A L
Sbjct: 221 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 280
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
+EM G T+T LI KA + A M G N Y +VD L K
Sbjct: 281 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 340
Query: 324 DGKIDHAINVFESM----EVKDS----------------FTYSSMVHNLCKAKRLPSASK 363
G I A V+ + + DS TY ++V LCKA ++ A +
Sbjct: 341 AGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 400
Query: 364 LLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
LL + L SG A++DG +G A+++
Sbjct: 401 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 436
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 157/358 (43%), Gaps = 15/358 (4%)
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGK-PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
M E G D ++ H L + G+ D + + ++ D CT M++GL +
Sbjct: 1 MSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTH----MISGLMEAS 56
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
Y D A+ ++ + +P +VTY L+ G K +L + I+ + G PN +
Sbjct: 57 YFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFN 116
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE------ATDYM 229
+++ + Y ++L+ M G Y I + +L A
Sbjct: 117 SLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIY 176
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
+M+ L+ V+ C GK + A+ L+ EM ++GF D T++ +I LC A
Sbjct: 177 GEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHA 236
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 345
++ A L + M +G ++ Y ++D K G I+ A +FE M TY
Sbjct: 237 TKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTY 296
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++++H KAK++P A+ + + +G R A+VDGL +G +A ++ +K+
Sbjct: 297 TALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 354
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 108/241 (44%), Gaps = 10/241 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ + +L+ M E G SP+VVTY +LI G + + SLDL +M G
Sbjct: 490 MIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 549
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y L++ L G D+A + +M + + G K+ +L
Sbjct: 550 CSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIA--SL 607
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI-----TYTT 176
+ ++ +G VP Y +LI KAGRL A + KE+ + P+++ Y +
Sbjct: 608 GILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME---VPSSVKTDNDMYAS 664
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
+++ + + + S M R+G+ + + +I V++ + EA + +G
Sbjct: 665 LIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEG 724
Query: 237 V 237
V
Sbjct: 725 V 725
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C D +L M++ + Y I G +++ + SL +L+EM
Sbjct: 559 VLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFI--ASLGILEEMESY 616
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM----LNGLCKNRY 116
G P Y L+ C + G+ + A + ++M+ ++ T N M + LC
Sbjct: 617 GTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMM--EVPSSVKTDNDMYASLIQALCLASQ 674
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 155
+ A R++ + + GFVPEL + LIKGL + + A
Sbjct: 675 VEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEA 713
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 185/378 (48%), Gaps = 6/378 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ + F+ ++ M + G+ TYN LI G +L+ +L L +EM+
Sbjct: 274 VLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLK 333
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P V +YNS ++ L +LG+ +A + DM+ +L P ++N ++ G C+ A
Sbjct: 334 GASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKA 393
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F L+ P +VTYN L+ GLC+ G L A+ + E+ + G AP+ +TYT ++
Sbjct: 394 FLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNG 453
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + E M +G D + Y T I +K+G A E+M+ G D
Sbjct: 454 SCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPD 513
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHL 299
++ YN +++ CK G LE A LL +M G D T+T +I + G + KG +
Sbjct: 514 LIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFY 573
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
E ++K G ++ Y ++ G+++ A F M+ K + TY+S+++ LCK
Sbjct: 574 EMLSK-GLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKV 632
Query: 356 KRLPSASKLLLSCLKSGV 373
+R+ A ++ G+
Sbjct: 633 RRMDQAYNFFAEMVEKGI 650
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 170/336 (50%), Gaps = 1/336 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI YC+ + + + + +R + P +VTYN+L+ G R L + L EM+ G
Sbjct: 380 LIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG 439
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+ +Y L++ ++G A F +M+ L + + + G K T A
Sbjct: 440 IAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAF 499
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + GF P+L+ YN+++ GLCK G L A +L+++ G P+ +TYT+I+
Sbjct: 500 SLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAH 559
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N + + G EI M KG T Y +I GRL+ A Y +M G+ ++
Sbjct: 560 LENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNV 619
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN+LIN CK +++ AY EM ++G +KY++TILI+ C GN + A +
Sbjct: 620 ITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQ 679
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M G + ++ ++ +LGKD K+ A+ ES+
Sbjct: 680 MLDRGVQPDSCTHSALLKQLGKDCKL-QAVRQLESL 714
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 173/372 (46%), Gaps = 6/372 (1%)
Query: 37 LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 96
LI ++ S++ L + D+M++ + PDV + N ++ L +A V++ M
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 229
Query: 97 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 156
+ P T+N +L+ CK L + +Q+ G P VTYN+LI GL K G A+
Sbjct: 230 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAK 289
Query: 157 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 216
++ E+ +G +A TY ++ F L + M KG + Y + I
Sbjct: 290 GLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGL 349
Query: 217 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
K+GR+ +A + M+ + + D+VSYNTLI YC+ G L A+LL DE+
Sbjct: 350 CKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTI 409
Query: 277 YTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
T+ L+DGLC+ G ++ A +L +E +N+ G ++ Y +V+ K G + A F+
Sbjct: 410 VTYNTLLDGLCRQGELEVAQQLKVEMINE-GIAPDIVTYTILVNGSCKMGSLSMAQEFFD 468
Query: 336 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
M + DS+ Y++ + K A L L G VVDGL G
Sbjct: 469 EMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLG 528
Query: 392 CRREAKKIQSKI 403
EA ++ K+
Sbjct: 529 NLEEASELLQKM 540
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 189/403 (46%), Gaps = 4/403 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI Y + + ++ ++M ++ +SPDV N ++ L+S ++++ M E
Sbjct: 169 LLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 228
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P + +YN+L+ + GK + + +M P T+N+++NGL K + A
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K G TYN LI G G L A + +E+ G +P TY + +
Sbjct: 289 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYG 348
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + ++ LS M D Y T+I + ++G L +A +++ + +
Sbjct: 349 LCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPT 408
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+YNTL++ C++G+LE A L EM +G D T+TIL++G CK G++ A+ +
Sbjct: 409 IVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFD 468
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G + + AY + K G A ++ E M K D Y+ +V LCK
Sbjct: 469 EMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLG 528
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L AS+LL + GV +++ +G R+ ++I
Sbjct: 529 NLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREI 571
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 119/260 (45%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ C+ S + M G+ D Y + I G + S + L +EML
Sbjct: 449 ILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAK 508
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PPD+ YN ++ L +LG +EA+ + Q M+ + P T+ +++ +N
Sbjct: 509 GFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKG 568
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G P +VTY +LI G GRL A E+ + G PN ITY +++
Sbjct: 569 REIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLING 628
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ R+ + M KG + + Y +I +G +EA +QM+ GVQ D
Sbjct: 629 LCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPD 688
Query: 241 IVSYNTLINLYCKEGKLEAA 260
+++ L+ K+ KL+A
Sbjct: 689 SCTHSALLKQLGKDCKLQAV 708
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 193/408 (47%), Gaps = 39/408 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ +C ++L +M + G PD VT SL+ G R + +S ++ L+D+M+E+
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN++ ++ LCK R ++A
Sbjct: 185 GYRPDIVAYNAI-----------------------------------IDSLCKTRRVNDA 209
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L F+ + + G P +VTY L+ GLC +GR A +L+++ PN ITY+ ++
Sbjct: 210 LDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDA 269
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+N K EI M R D Y ++I R+ EA + MV+ G D
Sbjct: 270 FVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPD 329
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+VSYNTLIN +CK ++E L +M ++G + T+ LI G + G++ A+
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFS 389
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M+ G ++ YN ++ L +G ++ A+ +FE M+ D TY++++ +CK
Sbjct: 390 QMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTG 449
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++ A L S G++ ++ GL G + E + + +K++
Sbjct: 450 KVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMK 497
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 142/271 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C ++ +L M + I+P+V+TY++L+ +N + + ++ +EM+ M
Sbjct: 231 LVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMS 290
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+ +Y+SL++ L + DEAN++F M+ P ++N ++NG CK + ++ +
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGM 350
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++FR + + G V VTYN LI+G + G + A+ ++ G +P+ TY ++
Sbjct: 351 KLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGL 410
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N + L I M++ D Y TVI K G++++A + G++ DI
Sbjct: 411 CDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDI 470
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
V+Y T+++ C +G L +M+++G
Sbjct: 471 VTYTTMMSGLCTKGLQHEVEALYTKMKQEGL 501
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 158/327 (48%), Gaps = 4/327 (1%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K +A +F++M+ P FN +L+ + K + D + + + ++ G +L T+N
Sbjct: 65 KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
I+I C ++ A +L ++ G+ P+ +T +++ R + + ++ M
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
GY D Y +I + K R+ +A D+ +++ G++ ++V+Y L+N C G+ A
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
LL +M K+ + T++ L+D K G + A+ E M ++ D ++ Y+ +++
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLING 304
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
L +ID A +F+ M K D +Y+++++ CKAKR+ KL + G+
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNN 364
Query: 377 KSAQKAVVDGLRHSGCRREAKKIQSKI 403
++ G G +A++ S++
Sbjct: 365 TVTYNTLIQGFFQVGDVDKAQEFFSQM 391
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 83/171 (48%), Gaps = 6/171 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + Q D ++M G+SPD+ TYN L+ G N LL +L + ++M +
Sbjct: 371 LIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSE 430
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D+ +Y +++ + + GK ++A +F + L P T+ M++GLC
Sbjct: 431 MDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVE 490
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
++ +++ G + ++L G G + + ++K++ G+AP+ +
Sbjct: 491 ALYTKMKQEGLMK---NDSMLCLG---DGDITISAELIKKMLSCGYAPSLL 535
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 90/193 (46%), Gaps = 4/193 (2%)
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
+L +A + +MV IV +N L++ K K + L +ME G D YT
Sbjct: 65 KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EV 339
I+I+ C + A L M K+G++ + +V+ + ++ A+++ + M E+
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 340 ---KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
D Y++++ +LCK +R+ A + G+R A+V+GL +SG +A
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244
Query: 397 KKIQSKIRMAKIS 409
++ + KI+
Sbjct: 245 ARLLRDMIKRKIT 257
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 196/418 (46%), Gaps = 30/418 (7%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD------ 55
L+ +YC + Y +LNRM G P V YN I L S DLLD
Sbjct: 183 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLP-SPDLLDLAEKIY 241
Query: 56 -EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
EML + + + CL +GK D+A ++ ++M+ P T+T++ ++ LC
Sbjct: 242 GEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHA 301
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
+ A +F+ ++ G P++ TY ILI CKAG + A+W+ +E+ G +P +TY
Sbjct: 302 TKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTY 361
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV- 233
T ++ + ++ +I M G + Y ++ K G + +A + +++
Sbjct: 362 TALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIG 421
Query: 234 -TDGVQLD--------------IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
+D D +V+Y L++ CK K++ A+ LLD M G E +
Sbjct: 422 TSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIV 481
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+ LIDG CKAG I A+ M K G+ ++ Y ++DR+ KDG++D A+ V M
Sbjct: 482 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM- 540
Query: 339 VKDS-----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+KDS TY++M+ LC+ A KLL + G A++DGL +G
Sbjct: 541 LKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAG 598
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 184/384 (47%), Gaps = 22/384 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID++C+ + + MR G SP VVTY +LI + + + D+ M++
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-------------CGD---LTPCTATF 104
G P+ +Y +L+ L + G +A V+ +I C D L P T+
Sbjct: 388 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447
Query: 105 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 164
+++GLCK D+A + + G P + Y+ LI G CKAG++ +A+ + ++
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
G+ P+ TYT+++ F++ + L +++LS M + T + Y +I +IG ++
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 567
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A + M G ++V+Y LI+ K GK++ + L +M ++G + T+ +LI+
Sbjct: 568 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLIN 627
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VK 340
LC AG + ARL L M + + L+ Y C + K ++ + E ME V
Sbjct: 628 HLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEEMESYGTVP 685
Query: 341 DSFTYSSMVHNLCKAKRLPSASKL 364
+ Y ++ KA RL A +L
Sbjct: 686 IAPVYGMLIDCFSKAGRLEIAMEL 709
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 164/336 (48%), Gaps = 8/336 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+ D + +L+ M +G P+ + Y++LI G + + + ++ +M + G
Sbjct: 450 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 509
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y SL+ +F+ G+ D A +V M+ TP T+ M++GLC+ ++ AL
Sbjct: 510 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 569
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-C 180
++ +++ G P +VTY LI GL KAG++ + + ++ G +PN +TY ++
Sbjct: 570 KLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 629
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C K L +L MK+ + GY I F K + +E+M + G
Sbjct: 630 CAAGLLDKARL-LLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEEMESYGTVPI 686
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEK--QGFECDKYTHTILIDGLCKAGNIKGA-RL 297
Y LI+ + K G+LE A L EM + + D + LI LC A ++ A RL
Sbjct: 687 APVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRL 746
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
+ E M + GF L + C++ L + K D A+ +
Sbjct: 747 YSE-MTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 174/395 (44%), Gaps = 15/395 (3%)
Query: 20 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 79
+ +++ G P VTYN+L+ + + + EM E G D ++ H L +
Sbjct: 29 DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88
Query: 80 GK-PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
G+ D + + ++ D CT M++GL + Y D A+ ++ + +P +VT
Sbjct: 89 GRWADALDMIEREDFKLDTVLCTH----MISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
Y L+ G K +L + I+ + G PN + +++ + Y ++L+ M
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKE------ATDYMEQMVTDGVQLDIVSYNTLINLYC 252
G Y I + +L A +M+ L+ V+ C
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 264
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
GK + A+ L+ EM ++GF D T++ +I LC A ++ A L + M +G ++
Sbjct: 265 GVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVY 324
Query: 313 AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
Y ++D K G I+ A +FE M TY++++H KAK++P A+ +
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 384
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ +G R A+VDGL +G +A ++ +K+
Sbjct: 385 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 419
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 167/445 (37%), Gaps = 58/445 (13%)
Query: 13 DAGYTILNRMREAG--------------------------------ISPDVVTYNSLIAG 40
D G+ + M E+G D V +I+G
Sbjct: 57 DLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISG 116
Query: 41 ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPC 100
S ++ L M P+V +Y +L+ + + R+ M+ P
Sbjct: 117 LMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPN 176
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT------ 154
+ FN +++ C + A ++ + G P V YNI I +C +L +
Sbjct: 177 PSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDL 236
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
A I E+ + N + +C K+ +++ M RKG+ D Y VI
Sbjct: 237 AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 296
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
++++A ++M GV D+ +Y LI+ +CK G +E A L +EM G
Sbjct: 297 FLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSP 356
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
T+T LI KA + A M G N Y +VD L K G I A V+
Sbjct: 357 TVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVY 416
Query: 335 ESM----EVKDS----------------FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
+ + DS TY ++V LCKA ++ A +LL + L SG
Sbjct: 417 AKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCE 476
Query: 375 ILKSAQKAVVDGLRHSGCRREAKKI 399
A++DG +G A+++
Sbjct: 477 PNHIVYDALIDGFCKAGKIDSAQEV 501
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C D +L M++ + Y I G +++ + SL +L+EM
Sbjct: 624 VLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFI--ASLGILEEMESY 681
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM----LNGLCKNRY 116
G P Y L+ C + G+ + A + ++M+ ++ T N M + LC
Sbjct: 682 GTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMM--EVPSSVKTDNDMYASLIQALCLASQ 739
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 155
+ A R++ + + GFVPEL + LIKGL + + A
Sbjct: 740 VEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEA 778
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 118/358 (32%), Positives = 171/358 (47%), Gaps = 4/358 (1%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
TYN LI G + DL EM GI P V +YN+++H L Q G + A F +M
Sbjct: 1192 TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEM 1251
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
L P T+N +LNG CK AL +F L++ G P ++TYNILI G C+ G L
Sbjct: 1252 RAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDL 1311
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
AR + +E+G+ G PN TYT +MK R + E M KG D F Y T
Sbjct: 1312 EEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTR 1371
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I A + +G + A + E ++ +G+ D V+YN LI+ CK G L+ A L +M G
Sbjct: 1372 ICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGL 1431
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
+ D T+T LI C+ G ++ AR M G + + I+ + G + A
Sbjct: 1432 QPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYG 1491
Query: 333 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
F M + + TY+ ++H LC+ R AS L+ G+ K ++DG
Sbjct: 1492 WFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDG 1549
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 173/376 (46%), Gaps = 4/376 (1%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
Y + M GI P VVTYN++I G ++ L+ + EM MG+ PDV +YNSL++
Sbjct: 1210 YDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNG 1269
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
+ G EA +F D+ L P T+NI+++G C+ + A + + + G +P
Sbjct: 1270 YCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPN 1329
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
+ TY IL+KG L AR E+ G P+ Y T + E+
Sbjct: 1330 VCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELRE 1389
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
+ +G + D Y +I K G LK+A + +MV++G+Q D ++Y LI+ +C+ G
Sbjct: 1390 VLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERG 1449
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
L A + + M G T T++I C+ GN+ A M + G + N YN
Sbjct: 1450 LLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYN 1509
Query: 316 CIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++ L + G+ A + F M V + +TY+ ++ CK A + ++
Sbjct: 1510 VLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQN 1569
Query: 372 GVRILKSAQKAVVDGL 387
G+ KA++ G
Sbjct: 1570 GIHPDYLTHKALLKGF 1585
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 162/338 (47%), Gaps = 39/338 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID YC+ + + M E G P+V TY L+ G+ L+ + + DEML
Sbjct: 1300 ILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSK 1359
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD ++YN+ + LG A + + ++ ++ T T+NI+++GLCK +A
Sbjct: 1360 GLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDA 1419
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + +G P+ +TY LI C+ G LR AR I + G P+A+T+T I
Sbjct: 1420 KELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVI--- 1476
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
I A+ + G L A + +M+ +GV+ +
Sbjct: 1477 --------------------------------IHAYCRRGNLYSAYGWFRKMLEEGVEPN 1504
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
++YN LI+ C+ G+ + A EM ++G +KYT+T+LIDG CK GN + A R +
Sbjct: 1505 EITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYF 1564
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
E M++ G + + ++ G DG + H I +++
Sbjct: 1565 E-MHQNGIHPDYLTHKALLK--GFDGHVHHTIEYLDNV 1599
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 178/389 (45%), Gaps = 7/389 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
+ M G++PDV N ++ + + +EMLE+GI P + +YN+L+
Sbjct: 1070 SAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSF 1129
Query: 77 FQLGKPDEANRVFQDMIC--GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
+ G+ D+ + ++M P T+N+++ GL + + A + G++
Sbjct: 1130 LKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKAS 1189
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
TYN LI GL G ++ + E+ + G P +TY ++ ++ +
Sbjct: 1190 SF-TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKF 1248
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
+ M+ G D Y +++ + K G LKEA + G+ +++YN LI+ YC+
Sbjct: 1249 AEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRL 1308
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
G LE A +L +EM +QG + T+TIL+ G ++ AR + M G + AY
Sbjct: 1309 GDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAY 1368
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
N + G I A + E + ++ D+ TY+ ++H LCK L A +L + +
Sbjct: 1369 NTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVS 1428
Query: 371 SGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+G++ ++ G REA+KI
Sbjct: 1429 NGLQPDCITYTCLIHAHCERGLLREARKI 1457
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 122/290 (42%), Gaps = 44/290 (15%)
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L FR + HG P++ N +++ L A R + +E+ + G P+ +TY
Sbjct: 1069 LSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYN----- 1123
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT--DGVQ 238
T++ +F+K GR + +++M T G
Sbjct: 1124 ------------------------------TLLDSFLKEGRKDKVAMLLKEMETRGSGCL 1153
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RL 297
+ V+YN +I ++G LE A L++ M + + +T+ LI GL G +K L
Sbjct: 1154 PNDVTYNVVITGLTRKGDLEEAAELVEGM-RLSKKASSFTYNPLITGLLARGCVKKVYDL 1212
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 353
LE N+ G + YN ++ L + G ++ A F M + D TY+S+++ C
Sbjct: 1213 QLEMENE-GIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYC 1271
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
KA L A L ++G+ ++DG G EA+ ++ ++
Sbjct: 1272 KAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEM 1321
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 193/408 (47%), Gaps = 39/408 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ +C +IL +M + G PD VT SL+ G R + +S ++ L+D+M+E+
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN++ ++ LCK + ++A
Sbjct: 185 GYKPDIVAYNAI-----------------------------------IDSLCKTKRVNDA 209
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
F+ +++ G P +VTY L+ GLC + R A +L ++ PN ITY+ ++
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 269
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+N K E+ M R D Y +++ R+ EA + MV+ G D
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+VSYNTLIN +CK ++E L EM ++G + T+ LI G +AG++ A+
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M+ G ++ YN ++ L +G+++ A+ +FE M+ + D TY++++ +CK
Sbjct: 390 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++ A L S G++ ++ GL G E + + +K++
Sbjct: 450 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 160/333 (48%), Gaps = 4/333 (1%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K ++A +F DM+ P FN +L+ + K + D + + + ++ G +L T+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
I+I C ++ A IL ++ G+ P+ +T +++ R + + ++ M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
GY D Y +I + K R+ +A D+ +++ G++ ++V+Y L+N C + A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
LL +M K+ + T++ L+D K G + A+ E M ++ D ++ Y+ +V+
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNG 304
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
L +ID A +F+ M K D +Y+++++ CKAKR+ KL + G+
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 377 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
++ G +G +A++ S++ IS
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 207/409 (50%), Gaps = 4/409 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ D +I M SPD VT+ SLI G + + + L ++ML+
Sbjct: 447 IMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDS 506
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+ Y SL+ F+ G+ ++ +++F++MI +P N ++ + K T
Sbjct: 507 DKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKG 566
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F ++ GF+P++++Y+ILI GL KAG R + + + G + Y T +
Sbjct: 567 RALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDG 626
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K ++L MK KG Y +VI KI RL EA E+ ++G++L+
Sbjct: 627 FCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELN 686
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V Y++LI+ + K G+++ AYL+++E+ ++G + YT L+D L KA I A + +
Sbjct: 687 VVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQ 746
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + N Y+ +++ L + K + A ++ M+ + ++ TY++M+ L KA
Sbjct: 747 NMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAG 806
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
+ AS L +G ++ A+++GL +S EA KI + RM
Sbjct: 807 NIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRM 855
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 201/408 (49%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ +A + + + M+EAG+ P+V+T N +I + L + + + M
Sbjct: 412 VLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHK 471
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PD ++ SL+ L + G+ D+A R+++ M+ D P + ++ K ++
Sbjct: 472 ICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDG 531
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F+ + G P+L N + + KAG R + +E+ G P+ ++Y+ ++
Sbjct: 532 HKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHG 591
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + E+ AMK +G D Y T I F K G++ +A +E+M T G Q
Sbjct: 592 LVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPT 651
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+Y ++I+ K +L+ AY+L +E + G E + ++ LIDG K G I A L +E
Sbjct: 652 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIME 711
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ + G N+ +NC++D L K +I+ A+ F++M+ + TYS +++ LC+ +
Sbjct: 712 ELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVR 771
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A K G++ ++ GL +G EA + + +
Sbjct: 772 KFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFK 819
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 164/374 (43%), Gaps = 35/374 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID + D Y + +M ++ P+ V Y SLI + + EM+ G
Sbjct: 483 LIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRG 542
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ N+ M C+F+ G+ + +F+++ P +++I+++GL K +
Sbjct: 543 CSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETY 602
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++ G V + YN I G CK+G++ A +L+E+ G P +TY +++
Sbjct: 603 ELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGL 662
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + K G + Y ++I F K+GR+ EA ME+++ G+ ++
Sbjct: 663 AKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNV 722
Query: 242 -----------------------------------VSYNTLINLYCKEGKLEAAYLLLDE 266
++Y+ LIN C+ K A++ E
Sbjct: 723 YTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQE 782
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+KQG + + T+T +I GL KAGNI A E G + +YN I++ L +
Sbjct: 783 MQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRR 842
Query: 327 IDHAINVFESMEVK 340
A +FE +K
Sbjct: 843 AMEAYKIFEETRMK 856
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/440 (25%), Positives = 189/440 (42%), Gaps = 40/440 (9%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
ID + + D + + ++ G+ PD VTY S+I + + L ++++ ++M +
Sbjct: 275 IDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRN 334
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P ++YN+++ GK DEA + + P +N +L L K ALR
Sbjct: 335 VPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALR 394
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
F ++K P L TYN+LI LCKAG + A + + ++G PN +T ++
Sbjct: 395 TFEEMKKDA-APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLC 453
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ +K I M K + D +C++I K GR+ +A EQM+ + V
Sbjct: 454 KAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAV 513
Query: 243 SYNTLINLYCKEGKLE---------------------AAYL--------------LLDEM 267
Y +LI + K G+ E AY+ L +E+
Sbjct: 514 VYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEI 573
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
+ +GF D +++ILI GL KAG + M + G + AYN +D K GK+
Sbjct: 574 KSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKV 633
Query: 328 DHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
+ A + E M+ K TY S++ L K RL A L +G+ + ++
Sbjct: 634 NKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSL 693
Query: 384 VDGLRHSGCRREAKKIQSKI 403
+DG G EA I ++
Sbjct: 694 IDGFGKVGRIDEAYLIMEEL 713
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 166/375 (44%), Gaps = 40/375 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI A D T+ ++M+E G V + ++I R L +L LLDEM
Sbjct: 204 LIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNC 263
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D+ YN + C + GK D A + F ++ L P T+ M+ LCK D A+
Sbjct: 264 LHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAV 323
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++++ VP YN +I G AG+ A +L+ G P+ I Y I+ C
Sbjct: 324 EIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTC- 382
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
LG K GRL EA E+M D ++
Sbjct: 383 -------LG---------------------------KKGRLGEALRTFEEMKKDAAP-NL 407
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN LI++ CK G++EAA+ + D M++ G + T I+ID LCKA + A E
Sbjct: 408 STYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEG 467
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
MN + + ++D LGK G++D A ++E M ++ ++ Y+S++ + K R
Sbjct: 468 MNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGR 527
Query: 358 LPSASKLLLSCLKSG 372
K+ + G
Sbjct: 528 KEDGHKIFKEMIHRG 542
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 149/336 (44%), Gaps = 10/336 (2%)
Query: 2 LIDAYCQFVSFDAGYT-----ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 56
L++AY V F AG T + ++ G PDV++Y+ LI G + + +L
Sbjct: 549 LLNAYMDCV-FKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYA 607
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
M E G D +YN+ + + GK ++A ++ ++M P T+ +++GL K
Sbjct: 608 MKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDR 667
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
D A +F + +G +V Y+ LI G K GR+ A I++EL G PN T+
Sbjct: 668 LDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 727
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ + + L MK T + Y +I ++ + +A + ++M G
Sbjct: 728 LLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQG 787
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
++ + ++Y T+I K G + A L + + G D ++ +I+GL + A
Sbjct: 788 LKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAY 847
Query: 297 LHLEYMNKIGFDSNLEAYNCI--VDRLGKDGKIDHA 330
E G N+ CI +D L KD ++ A
Sbjct: 848 KIFEETRMKG--CNIHTKTCIALLDALQKDECLEQA 881
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 135/301 (44%), Gaps = 5/301 (1%)
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+Y+SL+ + + K D ++ +M P T T ++ K+ + + +
Sbjct: 130 AYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCM 189
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
+K F P Y LI L + ++ + G+ + +TT+++ R +
Sbjct: 190 RKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRL 249
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
L +L MK D Y I F K G++ A + ++ + G+ D V+Y ++
Sbjct: 250 DAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSM 309
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
I + CK +L+ A + ++ME+ Y + +I G AG A LE G
Sbjct: 310 IGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGC 369
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASK 363
++ AYNCI+ LGK G++ A+ FE M+ KD+ TY+ ++ LCKA + +A K
Sbjct: 370 IPSVIAYNCILTCLGKKGRLGEALRTFEEMK-KDAAPNLSTYNVLIDMLCKAGEVEAAFK 428
Query: 364 L 364
+
Sbjct: 429 V 429
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 200/406 (49%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+A C+ + TI+ ++ E+ +SPD TY S+I G R L +L + ++M + G
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y++L++ L G+ +EA + ++MI + P T + LC ++A
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+F ++ G P + TY LI GLC +G L+ A + + G PN +TY ++
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINIL 400
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
NR+ K +L+ M R G + + Y +I + +G K+A M M+ G ++
Sbjct: 401 VENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANL 460
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNT+I YC G +A +LD M G + D++++T LI G CK ++ A
Sbjct: 461 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNE 520
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G N Y ++D KD K+D A ++ E M+ + TY+ ++H L K
Sbjct: 521 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN 580
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A +L ++ G+ A++DGL +G A ++ +K+
Sbjct: 581 FSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 208/465 (44%), Gaps = 80/465 (17%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C+ D+ + N+M + G P+ VTY++LI G + ++ + DL+ EM+ G
Sbjct: 256 MILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHG 315
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM--------------------ICGDLT--- 98
I P + + L +G ++A R+F DM + G L
Sbjct: 316 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAI 375
Query: 99 ------------PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
P T T+N ++N L +NR A + + ++G P +VTYN +IKG
Sbjct: 376 GLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGY 435
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C G + A ++ + GH+ N +TY TI+K + L IL M+ G D
Sbjct: 436 CILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDE 495
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ Y +I F KI +++ A +MV DG+ + V+Y LI+ YCK+ KL+ A LL+
Sbjct: 496 WSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEH 555
Query: 267 MEK-----------------------------------QGFECDKYTHTILIDGLCKAGN 291
M++ +G + T+T +IDGLCK G+
Sbjct: 556 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS 615
Query: 292 IKGARLHLEYMNKI---GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 344
L LE NK+ G NL Y+ ++ LG++GK++ A N+F +E + D T
Sbjct: 616 TS---LALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEIT 672
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
Y M+ + ++ A L +K+G + ++ GL++
Sbjct: 673 YVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN 717
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 191/397 (48%), Gaps = 20/397 (5%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
+ L+ + ++G+ + Y++L+ +R + + +D ML G+ P++ YN++++ L
Sbjct: 166 SFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 225
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ G +A + + + +++P T T+ M+ G C+ D+AL++F + K G P
Sbjct: 226 CKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNT 285
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
VTY+ LI GLC +GR+ A +++E+ G P A T T + Y+ +
Sbjct: 286 VTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVD 345
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
MK KG + + Y +I+ G LK A +M DGV + V+YN LIN+ + +
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
++ A+++L+ M + G + T+ +I G C G+ K A L + M + G +NL YN
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 465
Query: 317 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
I+ G A+ + + M D ++Y+ ++ CK ++ SA L + G
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525
Query: 373 VRILKSAQKAVVDG----------------LRHSGCR 393
+ + A++DG ++ SGCR
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 180/374 (48%), Gaps = 11/374 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I YC ++N M + G S ++VTYN++I G + + +L +LD M + G
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD WSY L+ ++ K + A +F +M+ L P T+ +++G CK+ D A
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ +++ G P + TYN+LI GL K A + K + + G PN +TYT ++
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N L LE+ + M +G + Y ++I A + G+++EA + ++ G+ D
Sbjct: 611 CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 670
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL-- 299
++Y +I Y GK+E A+ L M K G + +T+ +LI GL + RL
Sbjct: 671 ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALP 730
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLP 359
+ + F + + K ++D ++V +V++ ++V NL A R
Sbjct: 731 DVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSV----QVQN-----ALVSNLSTAGRWF 781
Query: 360 SASKLLLSCLKSGV 373
A++LL S + G+
Sbjct: 782 EANELLGSMISQGL 795
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 151/345 (43%), Gaps = 21/345 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + +F + M E GI P+VVTY ++I G +N S +L++ ++M+E
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P++ +Y+SL+ L Q GK +EA +F ++ L P T+ M+ + ++A
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN-AITYTTIMK 179
+ K G P L TY +LIKGL L R L L D PN + Y T +
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQR--LAALPDV--VPNCSFGYQTTDQ 745
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK----IGRLKEATDYMEQMVTD 235
+ +S M K D V A V GR EA + + M++
Sbjct: 746 ------------DAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQ 793
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G+ D +YN+L+ + ++ A + M QG E + LI LC+ K A
Sbjct: 794 GLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEA 853
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
R+ E M ++ + ++D L +DG D + ME +
Sbjct: 854 RITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 898
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 76/161 (47%)
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++K C + L + + G F Y ++ ++G D +M+++G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
VQ +++ YN +IN CK+G + A ++ ++ + D +T+T +I G C+ ++ A
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M K G + N Y+ +++ L G+++ A ++ M
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 311
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 94/237 (39%), Gaps = 25/237 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS------------- 48
+I+AY + + L RM +AG P + TY LI G LL+
Sbjct: 676 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPN 735
Query: 49 CSLD-----------LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 97
CS + ++ E+ V N+L+ L G+ EAN + MI L
Sbjct: 736 CSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGL 795
Query: 98 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 157
P +N +L L + R D A+ +F+ + G L Y LI LC+ R + AR
Sbjct: 796 CPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARI 855
Query: 158 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
+ + P+ + ++ R+ L +E L M+ + Y F T++A
Sbjct: 856 TFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRY-MPSFHIYTILA 911
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 56/131 (42%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L M G+ PD YNSL+ R + ++ + M G + Y L+ L
Sbjct: 786 LLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALC 845
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
QL + EA F++M+ P ++++GL ++ Y D + ++ ++P
Sbjct: 846 QLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFH 905
Query: 138 TYNILIKGLCK 148
Y IL + K
Sbjct: 906 IYTILAREASK 916
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 199/406 (49%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+A C+ + TI+ ++ E+ +SPD TY S+I G R L +L + ++M + G
Sbjct: 391 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 450
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y++L++ L G+ +EA + ++MI + P T + LC ++A
Sbjct: 451 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 510
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+F ++ G P + TY LI GLC +G L+ A + + G PN +TY ++
Sbjct: 511 RLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINIL 570
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
NR+ K +L+ M R G + Y +I + +G K+A M M+ G ++
Sbjct: 571 VENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANL 630
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNT+I YC G +A +LD M G + D++++T LI G CK ++ A
Sbjct: 631 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNE 690
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G N Y ++D KD K+D A ++ E M+ + TY+ ++H L K
Sbjct: 691 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN 750
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A +L ++ G+ A++DGL +G A ++ +K+
Sbjct: 751 FSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 796
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 207/465 (44%), Gaps = 80/465 (17%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C+ D+ + N+M + G P+ VTY++LI G + ++ + DL+ EM+ G
Sbjct: 426 MILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHG 485
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM--------------------ICGDLT--- 98
I P + + L +G ++A R+F DM + G L
Sbjct: 486 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAI 545
Query: 99 ------------PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
P T T+N ++N L +NR A + + ++G +VTYN +IKG
Sbjct: 546 GLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGY 605
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C G + A ++ + GH+ N +TY TI+K + L IL M+ G D
Sbjct: 606 CILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDE 665
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ Y +I F KI +++ A +MV DG+ + V+Y LI+ YCK+ KL+ A LL+
Sbjct: 666 WSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEH 725
Query: 267 MEK-----------------------------------QGFECDKYTHTILIDGLCKAGN 291
M++ +G + T+T +IDGLCK G+
Sbjct: 726 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS 785
Query: 292 IKGARLHLEYMNKI---GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 344
L LE NK+ G NL Y+ ++ LG++GK++ A N+F +E + D T
Sbjct: 786 TS---LALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEIT 842
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
Y M+ + ++ A L +K+G + ++ GL++
Sbjct: 843 YVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN 887
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 191/397 (48%), Gaps = 20/397 (5%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
+ L+ + ++G+ + Y++L+ +R + + +D ML G+ P++ YN++++ L
Sbjct: 336 SFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 395
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ G +A + + + +++P T T+ M+ G C+ D+AL++F + K G P
Sbjct: 396 CKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNT 455
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
VTY+ LI GLC +GR+ A +++E+ G P A T T + Y+ +
Sbjct: 456 VTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVD 515
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
MK KG + + Y +I+ G LK A +M DGV + V+YN LIN+ + +
Sbjct: 516 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 575
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
++ A+++L+ M + G + T+ +I G C G+ K A L + M + G +NL YN
Sbjct: 576 IKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 635
Query: 317 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
I+ G A+ + + M D ++Y+ ++ CK ++ SA L + G
Sbjct: 636 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 695
Query: 373 VRILKSAQKAVVDG----------------LRHSGCR 393
+ + A++DG ++ SGCR
Sbjct: 696 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 732
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 180/374 (48%), Gaps = 11/374 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I YC ++N M + G S ++VTYN++I G + + +L +LD M + G
Sbjct: 601 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 660
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD WSY L+ ++ K + A +F +M+ L P T+ +++G CK+ D A
Sbjct: 661 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 720
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ +++ G P + TYN+LI GL K A + K + + G PN +TYT ++
Sbjct: 721 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 780
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N L LE+ + M +G + Y ++I A + G+++EA + ++ G+ D
Sbjct: 781 CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 840
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL-- 299
++Y +I Y GK+E A+ L M K G + +T+ +LI GL + RL
Sbjct: 841 ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALP 900
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLP 359
+ + F + + K ++D ++V +V++ ++V NL A R
Sbjct: 901 DVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSV----QVQN-----ALVSNLSTAGRWF 951
Query: 360 SASKLLLSCLKSGV 373
A++LL S + G+
Sbjct: 952 EANELLGSMISQGL 965
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 151/345 (43%), Gaps = 21/345 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + +F + M E GI P+VVTY ++I G +N S +L++ ++M+E
Sbjct: 740 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 799
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P++ +Y+SL+ L Q GK +EA +F ++ L P T+ M+ + ++A
Sbjct: 800 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 859
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN-AITYTTIMK 179
+ K G P L TY +LIKGL L R L L D PN + Y T +
Sbjct: 860 FNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQR--LAALPDV--VPNCSFGYQTTDQ 915
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK----IGRLKEATDYMEQMVTD 235
+ +S M K D V A V GR EA + + M++
Sbjct: 916 ------------DAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQ 963
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G+ D +YN+L+ + ++ A + M QG E + LI LC+ K A
Sbjct: 964 GLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEA 1023
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
R+ E M ++ + ++D L +DG D + ME +
Sbjct: 1024 RITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 1068
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 76/161 (47%)
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++K C + L + + G F Y ++ ++G D +M+++G
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
VQ +++ YN +IN CK+G + A ++ ++ + D +T+T +I G C+ ++ A
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 440
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M K G + N Y+ +++ L G+++ A ++ M
Sbjct: 441 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 481
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 94/237 (39%), Gaps = 25/237 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS------------- 48
+I+AY + + L RM +AG P + TY LI G LL+
Sbjct: 846 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPN 905
Query: 49 CSLD-----------LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 97
CS + ++ E+ V N+L+ L G+ EAN + MI L
Sbjct: 906 CSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGL 965
Query: 98 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 157
P +N +L L + R D A+ +F+ + G L Y LI LC+ R + AR
Sbjct: 966 CPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARI 1025
Query: 158 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
+ + P+ + ++ R+ L +E L M+ + Y F T++A
Sbjct: 1026 TFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRY-MPSFHIYTILA 1081
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 55/127 (43%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L M G+ PD YNSL+ R + ++ + M G + Y L+ L
Sbjct: 956 LLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALC 1015
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
QL + EA F++M+ P ++++GL ++ Y D + ++ ++P
Sbjct: 1016 QLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFH 1075
Query: 138 TYNILIK 144
Y IL +
Sbjct: 1076 IYTILAR 1082
>gi|255570073|ref|XP_002525999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534731|gb|EEF36423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 557
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 200/404 (49%), Gaps = 14/404 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC++ + + R+R A D+V++N+L G + + + M +
Sbjct: 13 LIDGYCKYGQVEEACLTIKRIRNAECRVDLVSFNALFNGFCKRKMKEEVFIYMGLMWKCC 72
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+P +V +Y + + L ++G D + F++M + P F +++G K D A
Sbjct: 73 LP-NVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDGYSKIGNLDFAY 131
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++++ + K +P + TY LI G CK G L A W ++ + G PN+ YT+I+
Sbjct: 132 QLYKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPNSTVYTSIIDGH 191
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ + ++ S M+++ + D Y VI+ V GRL + + ME MV +G+ D
Sbjct: 192 FKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVMEDMVRNGLAPDK 251
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL-- 299
V TL++ + K G +AAY + E+ +GFE D T + LIDGLCK G A+ +
Sbjct: 252 VVLTTLMHAHFKAGNTKAAYGVYRELLNRGFEPDAVTISSLIDGLCKDGRYHDAKGYFCK 311
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKA 355
E N++ +Y ++D + K+G +D V ES V D F Y+S + LC+
Sbjct: 312 EKANEV-------SYTALIDGICKEGNLDEVERVVMEMSESGFVPDKFVYTSWIAELCRQ 364
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
++ A K+ ++ G+ + +++ GL + G EAK++
Sbjct: 365 GKIVEAFKVKNKMVEEGIDLDLLTYSSLIFGLANKGLMIEAKQL 408
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 175/372 (47%), Gaps = 6/372 (1%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
ID C+ D GY MR+ GI P+++ + LI G ++ L + L +M +
Sbjct: 83 IDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDGYSKIGNLDFAYQLYKDMCKSMH 142
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P+V++Y +L++ + G + A F M+ + P + + +++G K D A++
Sbjct: 143 LPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPNSTVYTSIIDGHFKKGNIDVAMK 202
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
F ++K F ++V Y ++I GL GRL +++++ +G AP+ + TT+M F
Sbjct: 203 YFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVMEDMVRNGLAPDKVVLTTLMHAHF 262
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ K + + +G+ D ++I K GR +A Y + + + V
Sbjct: 263 KAGNTKAAYGVYRELLNRGFEPDAVTISSLIDGLCKDGRYHDAKGYFCKE-----KANEV 317
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
SY LI+ CKEG L+ ++ EM + GF DK+ +T I LC+ G I A M
Sbjct: 318 SYTALIDGICKEGNLDEVERVVMEMSESGFVPDKFVYTSWIAELCRQGKIVEAFKVKNKM 377
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSAS 362
+ G D +L Y+ ++ L G + A +F+ M +K SMV ++ L +
Sbjct: 378 VEEGIDLDLLTYSSLIFGLANKGLMIEAKQLFDDM-LKRGIIPDSMVFDILIRGYLKQDN 436
Query: 363 KLLLSCLKSGVR 374
+ +S L +R
Sbjct: 437 PVAISHLHEEMR 448
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 138/301 (45%), Gaps = 8/301 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C+ + +M E GI P+ Y S+I G + + ++ EM +
Sbjct: 152 LINGFCKRGMLERAEWFFLKMLEVGIMPNSTVYTSIIDGHFKKGNIDVAMKYFSEMRKES 211
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
D+ +Y ++ L G+ D+ V +DM+ L P +++ K T A
Sbjct: 212 FRLDIVAYGVVISGLVNNGRLDKVLEVMEDMVRNGLAPDKVVLTTLMHAHFKAGNTKAAY 271
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR-WILKELGDSGHAPNAITYTTIMKC 180
++R L GF P+ VT + LI GLCK GR A+ + KE N ++YT ++
Sbjct: 272 GVYRELLNRGFEPDAVTISSLIDGLCKDGRYHDAKGYFCKE------KANEVSYTALIDG 325
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ M G+ D F Y + IA + G++ EA +MV +G+ LD
Sbjct: 326 ICKEGNLDEVERVVMEMSESGFVPDKFVYTSWIAELCRQGKIVEAFKVKNKMVEEGIDLD 385
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHL 299
+++Y++LI +G + A L D+M K+G D ILI G K N + + LH
Sbjct: 386 LLTYSSLIFGLANKGLMIEAKQLFDDMLKRGIIPDSMVFDILIRGYLKQDNPVAISHLHE 445
Query: 300 E 300
E
Sbjct: 446 E 446
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 127/274 (46%), Gaps = 13/274 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID + + + D + MR+ D+V Y +I+G N L L+++++M+ G
Sbjct: 187 IIDGHFKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVMEDMVRNG 246
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN-RYTDNA 120
+ PD +LMH F+ G A V+++++ P T + +++GLCK+ RY D
Sbjct: 247 LAPDKVVLTTLMHAHFKAGNTKAAYGVYRELLNRGFEPDAVTISSLIDGLCKDGRYHD-- 304
Query: 121 LRMFRGLQKHGFVPEL---VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
K F E V+Y LI G+CK G L ++ E+ +SG P+ YT+
Sbjct: 305 -------AKGYFCKEKANEVSYTALIDGICKEGNLDEVERVVMEMSESGFVPDKFVYTSW 357
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ R K ++ + M +G D Y ++I G + EA + M+ G+
Sbjct: 358 IAELCRQGKIVEAFKVKNKMVEEGIDLDLLTYSSLIFGLANKGLMIEAKQLFDDMLKRGI 417
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
D + ++ LI Y K+ A L +EM ++G
Sbjct: 418 IPDSMVFDILIRGYLKQDNPVAISHLHEEMRRRG 451
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 136/316 (43%), Gaps = 5/316 (1%)
Query: 99 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 158
P T+N +++G CK + A + ++ +LV++N L G CK +++ +I
Sbjct: 5 PDIVTYNSLIDGYCKYGQVEEACLTIKRIRNAECRVDLVSFNALFNGFCKR-KMKEEVFI 63
Query: 159 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 218
L PN ITY T + + G + M++ G + + +I + K
Sbjct: 64 YMGLMWKCCLPNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDGYSK 123
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
IG L A + M ++ +Y LIN +CK G LE A +M + G +
Sbjct: 124 IGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPNSTV 183
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+T +IDG K GNI A + M K F ++ AY ++ L +G++D + V E M
Sbjct: 184 YTSIIDGHFKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVMEDMV 243
Query: 339 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
D ++++H KA +A + L G +++DGL G
Sbjct: 244 RNGLAPDKVVLTTLMHAHFKAGNTKAAYGVYRELLNRGFEPDAVTISSLIDGLCKDGRYH 303
Query: 395 EAKKIQSKIRMAKISH 410
+AK K + ++S+
Sbjct: 304 DAKGYFCKEKANEVSY 319
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 126/265 (47%), Gaps = 11/265 (4%)
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G +P++VTYN LI G CK G++ A +K + ++ + +++ + F RK K
Sbjct: 2 GSLPDIVTYNSLIDGYCKYGQVEEACLTIKRIRNAECRVDLVSFNALFN-GFCKRKMKEE 60
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+ I + K + Y T I K+G L + ++M DG+ +++++ LI+
Sbjct: 61 VFIYMGLMWKCCLPNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDG 120
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
Y K G L+ AY L +M K + YT+ LI+G CK G ++ A M ++G N
Sbjct: 121 YSKIGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPN 180
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLL 365
Y I+D K G ID A+ F M K+SF Y ++ L RL +++
Sbjct: 181 STVYTSIIDGHFKKGNIDVAMKYFSEMR-KESFRLDIVAYGVVISGLVNNGRLDKVLEVM 239
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHS 390
+++G+ + K V+ L H+
Sbjct: 240 EDMVRNGL----APDKVVLTTLMHA 260
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 175/362 (48%), Gaps = 4/362 (1%)
Query: 8 QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 67
F + D + NRM P V +N L+ + S L L +M GIPP+++
Sbjct: 38 HFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIY 97
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+ + L++ L + A V ++ P TATF ++ G+ AL +F +
Sbjct: 98 TLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKM 157
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
GF P++VTY LI GLCK G A +L + PN Y TI+ ++R+
Sbjct: 158 IGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQV 217
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
+ S M KG + D F Y ++I A + K + +MV + D+VS+NT+
Sbjct: 218 TEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTV 277
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
++ CKEGK+ A+ ++D+M ++G E + T+T L+DG C + A + M G
Sbjct: 278 VDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGC 337
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASK 363
N+ +YN +++ K +ID A+ +F M + D+ TYS+++H LC +RL A
Sbjct: 338 MPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIA 397
Query: 364 LL 365
L
Sbjct: 398 LF 399
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 205/443 (46%), Gaps = 40/443 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+++C +++L ++ + G PD T+ +LI G + +L L D+M+
Sbjct: 101 ILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGE 160
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +Y +L++ L ++G A R+ M+ + P +N +++ LCK+R A
Sbjct: 161 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEA 220
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G P++ TYN LI LC + +L E+ DS P+ +++ T++
Sbjct: 221 FNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDA 280
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K +++ M ++G + Y ++ + + EA + MV G +
Sbjct: 281 LCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPN 340
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA----- 295
++SYNTLIN YCK +++ A L EM +Q D T++ LI GLC ++ A
Sbjct: 341 VISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFH 400
Query: 296 --------------RLHLEYMNK----------------IGFDSNLEAYNCIVDRLGKDG 325
R+ L+Y+ K D +++ N +D + + G
Sbjct: 401 EMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAG 460
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+++ A ++F ++ K D +TYS M++ LC+ L ASKL ++G +
Sbjct: 461 ELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYN 520
Query: 382 AVVDG-LRHSGCRREAKKIQSKI 403
+ G LR++ R + +Q +
Sbjct: 521 TITRGFLRNNETSRAIQLLQEMV 543
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 181/402 (45%), Gaps = 4/402 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ + A +L M + P+V YN++I ++ ++ + +L EM+ G
Sbjct: 172 LINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKG 231
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+++YNSL+H L L + + +M+ + P +FN +++ LCK A
Sbjct: 232 ISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAH 291
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P +VTY L+ G C + A + + G PN I+Y T++
Sbjct: 292 DVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGY 351
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ + + M R+ D Y T+I + RL++A +MV ++
Sbjct: 352 CKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNL 411
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y L++ CK L A LL +E + D + I IDG+C+AG ++ AR
Sbjct: 412 VTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSN 471
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
++ G ++ Y+ +++ L + G +D A +F M+ + Y+++ +
Sbjct: 472 LSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNE 531
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
A +LL + G S V L G + K+I
Sbjct: 532 TSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQI 573
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 124/265 (46%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D +C D + + M G P+V++YN+LI G + + ++ L EM
Sbjct: 312 LMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQE 371
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y++L+H L + + +A +F +M+ P T+ I+L+ LCKNRY A+
Sbjct: 372 LIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAM 431
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + ++ P++ NI I G+C+AG L AR + L G P+ TY+ ++
Sbjct: 432 ALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGL 491
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R ++ M G T +G Y T+ F++ A +++MV G D
Sbjct: 492 CRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADA 551
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDE 266
+ + + +G ++ +L E
Sbjct: 552 STMTLFVKMLSDDGLDQSLKQILRE 576
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 6/165 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ +L + + + PD+ N I G R L + DL +
Sbjct: 416 ILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK 475
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT---FNIMLNGLCKNRYT 117
G+ PDVW+Y+ +++ L + G DEA+++F++M D CT +N + G +N T
Sbjct: 476 GLQPDVWTYSIMINGLCRRGLLDEASKLFREM---DENGCTLNGCIYNTITRGFLRNNET 532
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
A+++ + + GF + T + +K L G ++ + IL+E
Sbjct: 533 SRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILREF 577
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 178/346 (51%), Gaps = 7/346 (2%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD--- 83
+SPD+ T+N++I+G R L + D+ ++ G+ P V +YNSL+ + G
Sbjct: 187 VSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMY 246
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+ + ++M+ ++P TF +++NG CKN T A+R+F +++ G +VTYN LI
Sbjct: 247 HVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLI 306
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
GLC G++ +++E+ D G +PN IT+ ++K + + + M +
Sbjct: 307 SGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVE 366
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y +I + ++G++++A E M G+ ++ +YN LI + + G +A L
Sbjct: 367 PDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGL 426
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
LDEM+++G E D T+ +LI LC G ++ A L+ M+++G + N YN I+
Sbjct: 427 LDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCD 486
Query: 324 DGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 365
G I A + ME + TY+ + C+ ++ A+ LL
Sbjct: 487 KGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLL 532
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 150/297 (50%), Gaps = 3/297 (1%)
Query: 2 LIDAYCQFVSFDAGYTI---LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
LID YC+ Y + L M EAGISP VT+ LI G +NS + ++ + +EM
Sbjct: 232 LIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMK 291
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
+ GI V +YNSL+ L GK +E ++ ++M L+P TF +L G CK
Sbjct: 292 QQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMA 351
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
+A G+ + P++V YNILI + G++ A + + + G +PN TY ++
Sbjct: 352 DANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLI 411
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
R+ ++ +L MK KG D Y +I A G +++A +++M G++
Sbjct: 412 TGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLE 471
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
+ ++YNT+I +C +G +++AY + MEK + T+ + I C+ G + A
Sbjct: 472 PNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEA 528
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 164/347 (47%), Gaps = 7/347 (2%)
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
P S N+L+ L + D A + F+ + ++P TFN +++GLC+ A +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 124 FRGLQKHGFVPELVTYNILIKGLCK---AGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++ G P + TYN LI G CK AG + +LKE+ ++G +P A+T+ ++
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+N + + MK++G Y ++I+ G+++E ME+M G+ +
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++ ++ +CK+G + A +D M ++ E D + ILID + G ++ A E
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M K G N+ YNC++ + G A + + M+ K D TY+ ++ LC
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ A KLL + G+ ++ G G + A +I++++
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM 500
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 145/290 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ + A + M++ GI+ VVTYNSLI+G + + L++EM ++
Sbjct: 269 VLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDL 328
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ ++ ++ + G +AN M ++ P +NI+++ + ++A
Sbjct: 329 GLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDA 388
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + K G P + TYN LI G ++G R+A +L E+ + G + +TY ++
Sbjct: 389 MAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGA 448
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + +++L M G + Y T+I F G +K A + +M + +
Sbjct: 449 LCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRAN 508
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+V+YN I +C+ GK++ A LL+EM + + T+ + +G+ + G
Sbjct: 509 VVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 7/203 (3%)
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
H P+ + ++ ++ L + + R+ + D + + TVI+ +IG+L++A
Sbjct: 152 HRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY---LLLDEMEKQGFECDKYTHTILI 283
D + + G+ + +YN+LI+ YCK+G Y +LL EM + G T +LI
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----V 339
+G CK N A E M + G +++ YN ++ L +GK++ + + E ME
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331
Query: 340 KDSFTYSSMVHNLCKAKRLPSAS 362
+ T+ ++ CK + A+
Sbjct: 332 PNEITFGCVLKGFCKKGMMADAN 354
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 177/350 (50%), Gaps = 6/350 (1%)
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
+L+ G+PP+ +N LM + + GK A VF +M+ + P TFN +++G+CK
Sbjct: 233 LLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASD 292
Query: 117 TDNALRMFRGLQ-KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
+NA RGL K G P++ TY I+GLCK GR++ A + +E+ + G PN + T
Sbjct: 293 LNNA-NALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLT 351
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T++ + GLE+ M +G D Y ++ F ++ +K A D +E+M D
Sbjct: 352 TLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKD 411
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G++ D V+Y TLI+ CKEG+L+ A + EM +G D T+T LI GL KAG A
Sbjct: 412 GLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDA 471
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHN 351
L M + G + Y ++D K+G + + M+ K TY+ +++
Sbjct: 472 ERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNG 531
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
C ++ +A LL + L GV ++DG G R+ ++++S
Sbjct: 532 FCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELKS 581
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 170/341 (49%), Gaps = 3/341 (0%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + M G+ P VVT+N+L++G + S L+ + L M + GI PDV++Y + + L
Sbjct: 264 VFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLC 323
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G+ +A +F++M L P T +++ CK L + + G +LV
Sbjct: 324 KTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLV 383
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
YN L+ G C+ ++ A I++E+ G P+ +TYTT++ C + + +E+ M
Sbjct: 384 AYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEM 443
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+G D Y +I+ K GR +A + +M+ G+Q D +Y +I+ +CK G +
Sbjct: 444 SDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDV 503
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ + L EM+ +G T+ ++++G C G +K A + L M IG N YN +
Sbjct: 504 KTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNIL 563
Query: 318 VDRLGKDGKI--DHAINVFESMEVKDSFTYSSMVHNLCKAK 356
+D K GK+ + + M V D Y+S+++ K K
Sbjct: 564 LDGHCKHGKVRDTEELKSAKGM-VSDFGVYTSLINEFVKKK 603
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 152/322 (47%), Gaps = 3/322 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ + + M +AGI+PDV TY + I G + + ++++ +EM E G
Sbjct: 283 LMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERG 342
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +L+ + G + +M + +N ++NG C+ R A
Sbjct: 343 LNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAAN 402
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++K G P+ VTY LI G CK G L TA + +E+ D G A + +TYT ++
Sbjct: 403 DIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGL 462
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + IL M G D Y VI AF K G +K ++++M G I
Sbjct: 463 SKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGI 522
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN ++N +C G+++ A +LL+ M G + T+ IL+DG CK G ++ E
Sbjct: 523 VTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTE---EL 579
Query: 302 MNKIGFDSNLEAYNCIVDRLGK 323
+ G S+ Y +++ K
Sbjct: 580 KSAKGMVSDFGVYTSLINEFVK 601
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 137/292 (46%), Gaps = 3/292 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
I C+ + M E G++P+ V +LI + ++ L+L EM G
Sbjct: 318 FIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRG 377
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D+ +YN+L++ ++ AN + ++M L P T+ +++G CK D A+
Sbjct: 378 VKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAM 437
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + + G + VTY LI GL KAGR A IL E+ ++G P+ TYT ++
Sbjct: 438 EMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAF 497
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N K G + L M+ KG Y V+ F +G++K A + M+ GV +
Sbjct: 498 CKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPND 557
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
++YN L++ +CK GK+ L +G D +T LI+ K + K
Sbjct: 558 ITYNILLDGHCKHGKVRDTEEL---KSAKGMVSDFGVYTSLINEFVKKKSAK 606
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 4/191 (2%)
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 277
++ + EA + ++ GV + +N L+ + GKL +A + DEM ++G +
Sbjct: 219 RLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVV 278
Query: 278 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
T L+ G+CKA ++ A M K G ++ Y + L K G+I A+ +FE M
Sbjct: 279 TFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEM 338
Query: 338 EVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 393
+ ++ ++++ CK + + +L GV+ A A+V+G
Sbjct: 339 CERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDM 398
Query: 394 REAKKIQSKIR 404
+ A I ++R
Sbjct: 399 KAANDIVEEMR 409
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M+IDA+C+ G+ L M+ G +P +VTYN ++ G + + LL+ ML +
Sbjct: 492 MVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNI 551
Query: 61 GIPPDVWSYNSLM--HC 75
G+ P+ +YN L+ HC
Sbjct: 552 GVCPNDITYNILLDGHC 568
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 196/393 (49%), Gaps = 5/393 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRN-SLLSCSLDLLDEMLEMGIPPDVWSYN 70
D + ++M G+ V + N I+ + + + +L + E E+G+ + SYN
Sbjct: 198 LDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYN 257
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+ H L QLG+ EA+++ M P +++ ++NG C+ L++ +Q
Sbjct: 258 IITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIK 317
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G P TYN +I LCK G++ A +L+E+ G AP+ + YTT++ +
Sbjct: 318 GLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSA 377
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+ M+++ + D Y VI + GR+ EA +MV ++ D V+Y LI+
Sbjct: 378 YRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDG 437
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
YCKEGK++ A+ L ++M + G + T+T L DGLCK G + A L M + G + N
Sbjct: 438 YCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELN 497
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLL 366
+ YN +V+ L K G ID A+ + + MEV D+ TY++++ CK++ + A +LL
Sbjct: 498 IYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLR 557
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L ++ +++G SG + +K+
Sbjct: 558 QMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL 590
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 201/443 (45%), Gaps = 39/443 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ + CQ + +L +M G PDV++Y+++I G + L L L++EM
Sbjct: 258 IITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIK 317
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ ++YN ++ L + GK EA RV ++MI + P + +++G CK +A
Sbjct: 318 GLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSA 377
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+F +QK P+ +TY +I GLC+ GR+ A + E+ P+ +TYT ++
Sbjct: 378 YRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDG 437
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K K + + M + G T + Y + K G + A + + +M G++L+
Sbjct: 438 YCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELN 497
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID---------------- 284
I +YN+L+N CK G ++ A L+ +ME GF D T+T L+D
Sbjct: 498 IYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLR 557
Query: 285 -------------------GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
G C +G ++ L++M + G N YN ++ +
Sbjct: 558 QMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRN 617
Query: 326 KIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+ ++ M V D TY+ ++ CKA+ + A L + G + S+
Sbjct: 618 NMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYN 677
Query: 382 AVVDGLRHSGCRREAKKIQSKIR 404
A++ G EA+++ ++R
Sbjct: 678 ALIKGFYKRKKFLEARELFEQMR 700
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 144/284 (50%), Gaps = 2/284 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ +++ N+M + G++P++VTY +L G + + + +LL EM G
Sbjct: 434 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 493
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ ++++YNSL++ L + G D+A ++ +DM P T+ +++ CK+R A
Sbjct: 494 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAH 553
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-C 180
+ R + P +VT+N+L+ G C +G L +LK + + G PNA TY +++K
Sbjct: 554 ELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQY 613
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C RN + EI M KG DG Y +I K +KEA MV G L
Sbjct: 614 CIRN-NMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLT 672
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
+ SYN LI + K K A L ++M ++G D+ + I D
Sbjct: 673 VSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFAD 716
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 163/362 (45%), Gaps = 35/362 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDV------------------------------ 31
LID +C+ + + Y + + M++ ISPD
Sbjct: 364 LIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 423
Query: 32 -----VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
VTY +LI G + + + L ++ML+MG+ P++ +Y +L L + G+ D AN
Sbjct: 424 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 483
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ +M L T+N ++NGLCK D A+++ + ++ GF P+ VTY L+
Sbjct: 484 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 543
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK+ + A +L+++ D P +T+ +M + + G ++L M KG +
Sbjct: 544 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 603
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y ++I + ++ T+ M GV D +YN LI +CK ++ A+ L +
Sbjct: 604 TTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRD 663
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M +GF ++ LI G K AR E M + G ++ E YN D +GK
Sbjct: 664 MVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGK 723
Query: 327 ID 328
++
Sbjct: 724 ME 725
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 175/353 (49%), Gaps = 7/353 (1%)
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN-RYT 117
+ G P V ++ L + G DEA ++F M+ L + N+ ++ L ++
Sbjct: 177 DWGSDPRV--FDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGI 234
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
AL++F + G +YNI+ LC+ GR+ A +L ++ G P+ I+Y+T+
Sbjct: 235 KIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTV 294
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + + + L+++ M+ KG + + Y VI K G++ EA + +M+++G+
Sbjct: 295 INGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGI 354
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
D V Y TLI+ +CK G + +AY L DEM+K+ D T+T +I GLC+ G + A
Sbjct: 355 APDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADK 414
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 353
M + + Y ++D K+GK+ A ++ M + TY+++ LC
Sbjct: 415 LFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLC 474
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
K + +A++LL + G+ + ++V+GL +G +A K+ + +A
Sbjct: 475 KCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVA 527
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 4/144 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ +C + G +L M E GI P+ TYNSLI + + + ++ M
Sbjct: 573 VLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAK 632
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G+ PD +YN L+ HC + K EA + +DM+ +++N ++ G K +
Sbjct: 633 GVVPDGNTYNILIKGHCKARNMK--EAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFL 690
Query: 119 NALRMFRGLQKHGFVPELVTYNIL 142
A +F +++ G V + YNI
Sbjct: 691 EARELFEQMRREGLVADREIYNIF 714
>gi|356525788|ref|XP_003531505.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Glycine max]
Length = 572
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 200/395 (50%), Gaps = 14/395 (3%)
Query: 5 AYCQFVSF-----DAGYTI--LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 57
+Y V+F + GY I + +M G + VTYN+L+ G + L+ SL LLD +
Sbjct: 136 SYTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRL 195
Query: 58 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
+ G+ P+ ++Y+ L+ ++ DEA ++ D+I P ++N++L GLCK T
Sbjct: 196 TKKGLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNLVSYNVLLTGLCKEGRT 255
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
+ A+++F+ L GF P +V++NIL++ LC GR A +L E+ P+ +TY +
Sbjct: 256 EEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANELLAEMDKEDQPPSVVTYNIL 315
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ N + + ++L M R G+ Y +IA K G++ ++QM+
Sbjct: 316 ITSLSLNGRTEQAFKVLDEMTRSGFKASATSYNPIIARLCKEGKVDLVLKCLDQMIHRRC 375
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDKYTHTILIDGLCKAGNIKGAR 296
+ +Y+ I++ ++GK++ A+ ++ + KQ F + + LI LC+ GN A
Sbjct: 376 HPNEGTYSA-ISMLSEQGKVQEAFFIIQSLGSKQNFPMHDF-YKNLIASLCRKGNTYPAF 433
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNL 352
L M K GF + Y+ ++ + ++G +D A+ +F +E D Y++++
Sbjct: 434 QMLYEMTKYGFTPDSYTYSSLIRGMCREGMLDEALKIFRILEENDHRPDIDNYNALILGF 493
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
CKA+R + ++ L + G ++ +V+GL
Sbjct: 494 CKAQRTDLSIEIFLMMVNKGCVPNENTYTILVEGL 528
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 160/333 (48%), Gaps = 6/333 (1%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM------GIPP 64
S + G++ ++ + ISP +N RN L + D L + G P
Sbjct: 38 SLNKGFSRVSASTQIAISPKDTIFNLPNWRVGRNDQKGKELRIYDAFLHLEYLVGKGQKP 97
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 124
+V L++ L + K +A RV + M+ + P A++ ++N LCK A+++
Sbjct: 98 EVNQATQLLYDLCKFNKARKAVRVMEMMVGSGIIPDAASYTHLVNFLCKRGNVGYAIQLV 157
Query: 125 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
++ HGF VTYN L+KGLC G L + +L L G PNA TY+ +++ ++
Sbjct: 158 EKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEAAYKE 217
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
R +++L + KG + Y ++ K GR +EA +++ G +VS+
Sbjct: 218 RGVDEAMKLLDDIIAKGGEPNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPSVVSF 277
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
N L+ C EG+ E A LL EM+K+ T+ ILI L G + A L+ M +
Sbjct: 278 NILLRSLCYEGRWEEANELLAEMDKEDQPPSVVTYNILITSLSLNGRTEQAFKVLDEMTR 337
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
GF ++ +YN I+ RL K+GK+D + + M
Sbjct: 338 SGFKASATSYNPIIARLCKEGKVDLVLKCLDQM 370
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 179/369 (48%), Gaps = 7/369 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C + + +L+R+ + G+ P+ TY+ L+ A + + ++ LLD+++ G
Sbjct: 175 LVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKG 234
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P++ SYN L+ L + G+ +EA ++FQ++ +P +FNI+L LC + A
Sbjct: 235 GEPNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEAN 294
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K P +VTYNILI L GR A +L E+ SG +A +Y I+
Sbjct: 295 ELLAEMDKEDQPPSVVTYNILITSLSLNGRTEQAFKVLDEMTRSGFKASATSYNPIIARL 354
Query: 182 FRNRKYKLGLEILSAM-KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K L L+ L M R+ + + G + I+ + G+++EA ++ + +
Sbjct: 355 CKEGKVDLVLKCLDQMIHRRCHPNE--GTYSAISMLSEQGKVQEAFFIIQSLGSKQNFPM 412
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
Y LI C++G A+ +L EM K GF D YT++ LI G+C+ G + A
Sbjct: 413 HDFYKNLIASLCRKGNTYPAFQMLYEMTKYGFTPDSYTYSSLIRGMCREGMLDEALKIFR 472
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ + +++ YN ++ K + D +I +F M V + TY+ +V L +
Sbjct: 473 ILEENDHRPDIDNYNALILGFCKAQRTDLSIEIFLMMVNKGCVPNENTYTILVEGLAFEE 532
Query: 357 RLPSASKLL 365
A+ L+
Sbjct: 533 ETDIAADLM 541
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 140/305 (45%), Gaps = 10/305 (3%)
Query: 97 LTPCTATFNIMLNGLCKNRYTDNALRMFRG------LQKHGFVPELVTYNILIKGLCKAG 150
++P FN+ + +N LR++ L G PE+ L+ LCK
Sbjct: 54 ISPKDTIFNLPNWRVGRNDQKGKELRIYDAFLHLEYLVGKGQKPEVNQATQLLYDLCKFN 113
Query: 151 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
+ R A +++ + SG P+A +YT ++ + ++++ M+ G+ + Y
Sbjct: 114 KARKAVRVMEMMVGSGIIPDAASYTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYN 173
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
T++ G L ++ ++++ G+ + +Y+ L+ KE ++ A LLD++ +
Sbjct: 174 TLVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAK 233
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
G E + ++ +L+ GLCK G + A + + GF ++ ++N ++ L +G+ + A
Sbjct: 234 GGEPNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEA 293
Query: 331 INVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+ M+ +D TY+ ++ +L R A K+L +SG + ++ ++
Sbjct: 294 NELLAEMDKEDQPPSVVTYNILITSLSLNGRTEQAFKVLDEMTRSGFKASATSYNPIIAR 353
Query: 387 LRHSG 391
L G
Sbjct: 354 LCKEG 358
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 106/266 (39%), Gaps = 34/266 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ + C ++ +L M + P VVTYN LI + N + +LDEM
Sbjct: 279 ILLRSLCYEGRWEEANELLAEMDKEDQPPSVVTYNILITSLSLNGRTEQAFKVLDEMTRS 338
Query: 61 GIPPDVWSYNSL-------------MHCLFQL---------------------GKPDEAN 86
G SYN + + CL Q+ GK EA
Sbjct: 339 GFKASATSYNPIIARLCKEGKVDLVLKCLDQMIHRRCHPNEGTYSAISMLSEQGKVQEAF 398
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ Q + P + ++ LC+ T A +M + K+GF P+ TY+ LI+G+
Sbjct: 399 FIIQSLGSKQNFPMHDFYKNLIASLCRKGNTYPAFQMLYEMTKYGFTPDSYTYSSLIRGM 458
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C+ G L A I + L ++ H P+ Y ++ + ++ L +EI M KG +
Sbjct: 459 CREGMLDEALKIFRILEENDHRPDIDNYNALILGFCKAQRTDLSIEIFLMMVNKGCVPNE 518
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQM 232
Y ++ A D M+++
Sbjct: 519 NTYTILVEGLAFEEETDIAADLMKEL 544
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 4/150 (2%)
Query: 34 YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
Y +LIA R + +L EM + G PD ++Y+SL+ + + G DEA ++F+ +
Sbjct: 416 YKNLIASLCRKGNTYPAFQMLYEMTKYGFTPDSYTYSSLIRGMCREGMLDEALKIFRILE 475
Query: 94 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 153
D P +N ++ G CK + TD ++ +F + G VP TY IL++GL
Sbjct: 476 ENDHRPDIDNYNALILGFCKAQRTDLSIEIFLMMVNKGCVPNENTYTILVEGLAFEEETD 535
Query: 154 TARWILKELGDSGHAPNAITYTTIMKCCFR 183
A ++KEL + ++ +T+ + C +
Sbjct: 536 IAADLMKEL----YLKKVLSQSTVERLCMQ 561
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 31/192 (16%)
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 277
K + ++A ME MV G+ D SY L+N CK G + A L+++ME GF +
Sbjct: 111 KFNKARKAVRVMEMMVGSGIIPDAASYTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTV 170
Query: 278 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
T+ L+ GLC GN+ + +L+ ++DRL K G I +A
Sbjct: 171 TYNTLVKGLCMHGNL---------------NQSLQ----LLDRLTKKGLIPNA------- 204
Query: 338 EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
FTYS ++ K + + A KLL + G + ++ GL G EA
Sbjct: 205 -----FTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNLVSYNVLLTGLCKEGRTEEAI 259
Query: 398 KIQSKIRMAKIS 409
K+ ++ + S
Sbjct: 260 KLFQELPVKGFS 271
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 182/355 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ D ++L +M + I DVV Y ++I ++ +L+L EM G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V +YNSL+ CL G+ +A+R+ DMI + P TF+ +++ K A
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + K P++ TY+ LI G C RL A+ + + + PN +TY T++K
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ + G+E+ M ++G + Y T+I + G A ++MV+DGV DI
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y+ L++ CK GKLE A ++ + ++K E D YT+ I+I+G+CKAG ++
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAK 356
++ G N+ Y ++ + G + A +F M+ + S + L +A+
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRAR 580
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 200/435 (45%), Gaps = 39/435 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ +L +M + G PD+VT +SL+ G +S ++ L+D+M M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN------ 114
P+ ++N+L+H LF K EA + M+ P T+ ++NGLCK
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 115 -----------------------------RYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+ ++AL +F + G P +VTYN LI+
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LC GR A +L ++ + PN +T++ ++ + K ++ M ++ D
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
F Y ++I F RL EA E M++ ++V+YNTLI +CK ++E L
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM ++G + T+ LI GL +AG+ A+ + M G ++ Y+ ++D L K G
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
K++ A+ VFE ++ D +TY+ M+ +CKA ++ L S GV+
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539
Query: 382 AVVDGLRHSGCRREA 396
++ G G + EA
Sbjct: 540 TMISGFCRKGLKEEA 554
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 177/370 (47%), Gaps = 5/370 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+IDA C + + + + M GI P+VVTYNSLI S + LL +M+E
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V ++++L+ + GK EA +++ +MI + P T++ ++NG C + D A
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
MF + P +VTYN LIKG CKA R+ + +E+ G N +TY T+++
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ + +I M G D Y ++ K G+L++A E + ++ DI
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN +I CK GK+E + L + +G + + +T +I G C+ G + A
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M + G N YN ++ +DG + + + M V D+ T SMV N+ R
Sbjct: 561 MKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI-SMVINMLHDGR 619
Query: 358 LPSASKLLLS 367
L + +LS
Sbjct: 620 LEKSYLEMLS 629
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 186/390 (47%), Gaps = 4/390 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + FD ++ RM+ IS D+ +YN LI R S L +L +L +M+++G
Sbjct: 86 LLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLG 145
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ + +SL++ + EA + M + P T TFN +++GL + A+
Sbjct: 146 YEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV 205
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P+L TY ++ GLCK G + A +LK++ + + YTTI+
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ L + + M KG + Y ++I GR +A+ + M+ + ++
Sbjct: 266 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+++ LI+ + KEGKL A L DEM K+ + D +T++ LI+G C + A+ E
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M N+ YN ++ K +++ + +F M V ++ TY++++ L +A
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
A K+ + GV ++DGL
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 178/398 (44%), Gaps = 4/398 (1%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
+ D + M ++ P +V +N L++ + + + L + M + I D++SY
Sbjct: 59 LKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSY 118
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N L++C + + A V M+ P T + +LNG C + A+ + +
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
+ P VT+N LI GL + A ++ + G P+ TY T++ + L
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
L +L M++ D Y T+I A + +A + +M G++ ++V+YN+LI
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
C G+ A LL +M ++ + T + LID K G + A + M K D
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLL 365
++ Y+ +++ ++D A ++FE M KD F TY++++ CKAKR+ +L
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ G+ ++ GL +G A+KI K+
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 119/263 (45%), Gaps = 4/263 (1%)
Query: 151 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
+L A + E+ S P+ + + ++ + K+ L + + M+ ++D + Y
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
+I F + +L A + +M+ G + DIV+ ++L+N YC ++ A L+D+M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
++ + T LI GL A ++ M G +L Y +V+ L K G ID A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 331 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+++ + ME D Y++++ LC K + A L G+R +++
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 387 LRHSGCRREAKKIQSKIRMAKIS 409
L + G +A ++ S + KI+
Sbjct: 300 LCNYGRWSDASRLLSDMIERKIN 322
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C++ + + ++++ + PD+ TYN +I G + + DL +
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V Y +++ + G +EA+ +F++M P + T+N ++ ++ +
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 589
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 155
+ + ++ GFV + T +++I L GRL +
Sbjct: 590 AELIKEMRSCGFVGDASTISMVINML-HDGRLEKS 623
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ + G+ + + G+ P+V+ Y ++I+G R L + L EM E
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM----ICGDLTPCTATFNIMLNGLCKNRY 116
G P+ +YN+L+ + G + + ++M GD + + N++ +G + Y
Sbjct: 565 GTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSY 624
Query: 117 TD 118
+
Sbjct: 625 LE 626
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 178/346 (51%), Gaps = 7/346 (2%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD--- 83
+SPD+ T+N++I+G R L + D+ ++ G+ P V +YNSL+ + G
Sbjct: 187 VSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMY 246
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+ + ++M+ ++P TF +++NG CKN T A+R+F +++ G +VTYN LI
Sbjct: 247 HVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLI 306
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
GLC G++ +++E+ D G +PN IT+ ++K + + + M +
Sbjct: 307 SGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVE 366
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y +I + ++G++++A E M G+ ++ +YN LI + + G +A L
Sbjct: 367 PDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGL 426
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
LDEM+++G E D T+ +LI LC G ++ A L+ M+++G + N YN I+
Sbjct: 427 LDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCD 486
Query: 324 DGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 365
G I A + ME + TY+ + C+ ++ A+ LL
Sbjct: 487 KGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLL 532
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 150/297 (50%), Gaps = 3/297 (1%)
Query: 2 LIDAYCQFVSFDAGYTI---LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
LID YC+ Y + L M EAGISP VT+ LI G +NS + ++ + +EM
Sbjct: 232 LIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMK 291
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
+ GI V +YNSL+ L GK +E ++ ++M L+P TF +L G CK
Sbjct: 292 QQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMA 351
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
+A G+ + P++V YNILI + G++ A + + + G +PN TY ++
Sbjct: 352 DANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLI 411
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
R+ ++ +L MK KG D Y +I A G +++A +++M G++
Sbjct: 412 TGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLE 471
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
+ ++YNT+I +C +G +++AY + MEK + T+ + I C+ G + A
Sbjct: 472 PNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEA 528
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 164/347 (47%), Gaps = 7/347 (2%)
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
P S N+L+ L + D A + F+ + ++P TFN +++GLC+ A +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 124 FRGLQKHGFVPELVTYNILIKGLCK---AGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++ G P + TYN LI G CK AG + +LKE+ ++G +P A+T+ ++
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+N + + MK++G Y ++I+ G+++E ME+M G+ +
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++ ++ +CK+G + A +D M ++ E D + ILID + G ++ A E
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M K G N+ YNC++ + G A + + M+ K D TY+ ++ LC
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ A KLL + G+ ++ G G + A +I++++
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM 500
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 145/290 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ + A + M++ GI+ VVTYNSLI+G + + L++EM ++
Sbjct: 269 VLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDL 328
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ ++ ++ + G +AN M ++ P +NI+++ + ++A
Sbjct: 329 GLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDA 388
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + K G P + TYN LI G ++G R+A +L E+ + G + +TY ++
Sbjct: 389 MAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGA 448
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + +++L M G + Y T+I F G +K A + +M + +
Sbjct: 449 LCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRAN 508
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+V+YN I +C+ GK++ A LL+EM + + T+ + +G+ + G
Sbjct: 509 VVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 7/195 (3%)
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
H P+ + ++ ++ L + + R+ + D + + TVI+ +IG+L++A
Sbjct: 152 HRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY---LLLDEMEKQGFECDKYTHTILI 283
D + + G+ + +YN+LI+ YCK+G Y +LL EM + G T +LI
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----V 339
+G CK N A E M + G +++ YN ++ L +GK++ + + E ME
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331
Query: 340 KDSFTYSSMVHNLCK 354
+ T+ ++ CK
Sbjct: 332 PNEITFGCVLKGFCK 346
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 182/355 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ D ++L +M + I DVV Y ++I ++ +L+L EM G
Sbjct: 210 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 269
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V +YNSL+ CL G+ +A+R+ DMI + P TF+ +++ K A
Sbjct: 270 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 329
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + K P++ TY+ LI G C RL A+ + + + PN +TY T++K
Sbjct: 330 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 389
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ + G+E+ M ++G + Y T+I + G A ++MV+DGV DI
Sbjct: 390 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 449
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y+ L++ CK GKLE A ++ + ++K E D YT+ I+I+G+CKAG ++
Sbjct: 450 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 509
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAK 356
++ G N+ Y ++ + G + A +F M+ + S + L +A+
Sbjct: 510 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRAR 564
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 200/435 (45%), Gaps = 39/435 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ +L +M + G PD+VT +SL+ G +S ++ L+D+M M
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN------ 114
P+ ++N+L+H LF K EA + M+ P T+ ++NGLCK
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223
Query: 115 -----------------------------RYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+ ++AL +F + G P +VTYN LI+
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 283
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LC GR A +L ++ + PN +T++ ++ + K ++ M ++ D
Sbjct: 284 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 343
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
F Y ++I F RL EA E M++ ++V+YNTLI +CK ++E L
Sbjct: 344 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 403
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM ++G + T+ LI GL +AG+ A+ + M G ++ Y+ ++D L K G
Sbjct: 404 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 463
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
K++ A+ VFE ++ D +TY+ M+ +CKA ++ L S GV+
Sbjct: 464 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 523
Query: 382 AVVDGLRHSGCRREA 396
++ G G + EA
Sbjct: 524 TMISGFCRKGLKEEA 538
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 177/370 (47%), Gaps = 5/370 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+IDA C + + + + M GI P+VVTYNSLI S + LL +M+E
Sbjct: 245 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 304
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V ++++L+ + GK EA +++ +MI + P T++ ++NG C + D A
Sbjct: 305 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 364
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
MF + P +VTYN LIKG CKA R+ + +E+ G N +TY T+++
Sbjct: 365 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 424
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ + +I M G D Y ++ K G+L++A E + ++ DI
Sbjct: 425 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 484
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN +I CK GK+E + L + +G + + +T +I G C+ G + A
Sbjct: 485 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 544
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M + G N YN ++ +DG + + + M V D+ T SMV N+ R
Sbjct: 545 MKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI-SMVINMLHDGR 603
Query: 358 LPSASKLLLS 367
L + +LS
Sbjct: 604 LEKSYLEMLS 613
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 186/390 (47%), Gaps = 4/390 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + FD ++ RM+ IS D+ +YN LI R S L +L +L +M+++G
Sbjct: 70 LLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLG 129
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ + +SL++ + EA + M + P T TFN +++GL + A+
Sbjct: 130 YEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV 189
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P+L TY ++ GLCK G + A +LK++ + + YTTI+
Sbjct: 190 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 249
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ L + + M KG + Y ++I GR +A+ + M+ + ++
Sbjct: 250 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 309
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+++ LI+ + KEGKL A L DEM K+ + D +T++ LI+G C + A+ E
Sbjct: 310 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 369
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M N+ YN ++ K +++ + +F M V ++ TY++++ L +A
Sbjct: 370 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 429
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
A K+ + GV ++DGL
Sbjct: 430 CDMAQKIFKKMVSDGVPPDIITYSILLDGL 459
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 178/398 (44%), Gaps = 4/398 (1%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
+ D + M ++ P +V +N L++ + + + L + M + I D++SY
Sbjct: 43 LKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSY 102
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N L++C + + A V M+ P T + +LNG C + A+ + +
Sbjct: 103 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 162
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
+ P VT+N LI GL + A ++ + G P+ TY T++ + L
Sbjct: 163 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 222
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
L +L M++ D Y T+I A + +A + +M G++ ++V+YN+LI
Sbjct: 223 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 282
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
C G+ A LL +M ++ + T + LID K G + A + M K D
Sbjct: 283 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 342
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLL 365
++ Y+ +++ ++D A ++FE M KD F TY++++ CKAKR+ +L
Sbjct: 343 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 402
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ G+ ++ GL +G A+KI K+
Sbjct: 403 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 440
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 119/263 (45%), Gaps = 4/263 (1%)
Query: 151 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
+L A + E+ S P+ + + ++ + K+ L + + M+ ++D + Y
Sbjct: 44 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
+I F + +L A + +M+ G + DIV+ ++L+N YC ++ A L+D+M
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
++ + T LI GL A ++ M G +L Y +V+ L K G ID A
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223
Query: 331 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+++ + ME D Y++++ LC K + A L G+R +++
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 283
Query: 387 LRHSGCRREAKKIQSKIRMAKIS 409
L + G +A ++ S + KI+
Sbjct: 284 LCNYGRWSDASRLLSDMIERKIN 306
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C++ + + ++++ + PD+ TYN +I G + + DL +
Sbjct: 454 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 513
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V Y +++ + G +EA+ +F++M P + T+N ++ ++ +
Sbjct: 514 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 573
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 155
+ + ++ GFV + T +++I L GRL +
Sbjct: 574 AELIKEMRSCGFVGDASTISMVINML-HDGRLEKS 607
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ + G+ + + G+ P+V+ Y ++I+G R L + L EM E
Sbjct: 489 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 548
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM----ICGDLTPCTATFNIMLNGLCKNRY 116
G P+ +YN+L+ + G + + ++M GD + + N++ +G + Y
Sbjct: 549 GTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSY 608
Query: 117 TD 118
+
Sbjct: 609 LE 610
>gi|225462201|ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic [Vitis vinifera]
gi|147852271|emb|CAN82234.1| hypothetical protein VITISV_038804 [Vitis vinifera]
Length = 567
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 200/395 (50%), Gaps = 11/395 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ + ++ +M E G + VTYNSL+ G + LS SL +LD+ ++ G
Sbjct: 138 LVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKKG 197
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V++Y+ L+ ++ DEA R+ +++ P ++N++L GLCK T+ A+
Sbjct: 198 LVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAM 257
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ FR L GF P +V+YNIL++ LC GR A+ +L E+ +P+ +T+ ++
Sbjct: 258 QFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGERSPSIVTFNILIGSL 317
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + LE+L M R + Y +IA K G++ ++QM+ +
Sbjct: 318 ALHGQTDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPNE 377
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI---LIDGLCKAGNIKGARLH 298
+YN I + C+EGK++ A+ ++ + G + + TH +I LC+ GN A
Sbjct: 378 GTYNA-IAVLCEEGKVQEAFSIIQSL---GNKQNSSTHDFYKGVISSLCRKGNTYPAFQL 433
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCK 354
L M K GF + Y+ ++ L +G +D A+ +F ME D +++++ LCK
Sbjct: 434 LYEMTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNALILGLCK 493
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
++ + + +K G ++ +V+G+ H
Sbjct: 494 CRKTDLSLMVFEMMVKKGYMPNETTYTIIVEGIAH 528
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 176/368 (47%), Gaps = 11/368 (2%)
Query: 10 VSFDAGYTILNRMREAGISP--DVVTYNSLIAGA----TRNSLLSCSLDLLDEMLEMGIP 63
+S + G++ + + ISP +V T + +G TR+ L+ + L+ M+ G
Sbjct: 35 LSLNKGFSRVLASTQITISPKDNVFTLPNWRSGKNDPRTRDLRLNDAFLYLEYMIGKGHK 94
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
PD LM+ L + K +A +V + MI TP A+ ++N LCK A+++
Sbjct: 95 PDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPASCTFLVNNLCKRGNVGYAMQL 154
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
++++G+ VTYN L++GLC G L + IL + G PN TY+ +++ ++
Sbjct: 155 VEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKKGLVPNVFTYSFLLEAAYK 214
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
R + +L + KG + Y ++ K GR +EA + + + G ++VS
Sbjct: 215 ERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVS 274
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
YN L+ C EG+ E A LL EM+ T ILI L G A L+ M+
Sbjct: 275 YNILLRSLCYEGRWEKAKELLAEMDGGERSPSIVTFNILIGSLALHGQTDQALEVLDDMS 334
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLP 359
+ F + +YN I+ RL K+GK+D + + M + + TY++ + LC+ ++
Sbjct: 335 RARFKATAASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPNEGTYNA-IAVLCEEGKVQ 393
Query: 360 SASKLLLS 367
A ++ S
Sbjct: 394 EAFSIIQS 401
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 154/347 (44%), Gaps = 1/347 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++A + D +L+ + G P++V+YN L+ G + ++ ++ G
Sbjct: 208 LLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAMQFFRDLPSKG 267
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V SYN L+ L G+ ++A + +M G+ +P TFNI++ L + TD AL
Sbjct: 268 FSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGERSPSIVTFNILIGSLALHGQTDQAL 327
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + F +YN +I LCK G++ L ++ PN TY I C
Sbjct: 328 EVLDDMSRARFKATAASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPNEGTYNAIAVLC 387
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K + I+ ++ K + Y VI++ + G A + +M G D
Sbjct: 388 -EEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCRKGNTYPAFQLLYEMTKYGFVPDS 446
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y++LI C EG L+ A + ME+ D LI GLCK + + E
Sbjct: 447 YTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNALILGLCKCRKTDLSLMVFEM 506
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSM 348
M K G+ N Y IV+ + +++ A V + + ++ + S++
Sbjct: 507 MVKKGYMPNETTYTIIVEGIAHQEEMELAAAVLKELYLRQAVGRSTL 553
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 130/286 (45%), Gaps = 1/286 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C+ + + G SP+VV+YN L+ + +LL EM
Sbjct: 242 VLLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGG 301
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P + ++N L+ L G+ D+A V DM A++N ++ LCK D
Sbjct: 302 ERSPSIVTFNILIGSLALHGQTDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDLV 361
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + P TYN I LC+ G+++ A I++ LG+ ++ Y ++
Sbjct: 362 VKCLDQMMYRRCNPNEGTYNA-IAVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISS 420
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R ++L M + G+ D + Y ++I G L EA + M + + D
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPD 480
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++N LI CK K + + ++ + M K+G+ ++ T+TI+++G+
Sbjct: 481 VDNFNALILGLCKCRKTDLSLMVFEMMVKKGYMPNETTYTIIVEGI 526
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 106/266 (39%), Gaps = 34/266 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ + C ++ +L M SP +VT+N LI + +L++LD+M
Sbjct: 277 ILLRSLCYEGRWEKAKELLAEMDGGERSPSIVTFNILIGSLALHGQTDQALEVLDDMSRA 336
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM------------- 107
SYN ++ L + GK D + M+ P T+N +
Sbjct: 337 RFKATAASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPNEGTYNAIAVLCEEGKVQEAF 396
Query: 108 ---------------------LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
++ LC+ T A ++ + K+GFVP+ TY+ LI+GL
Sbjct: 397 SIIQSLGNKQNSSTHDFYKGVISSLCRKGNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGL 456
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C G L A I + ++ P+ + ++ + RK L L + M +KGY +
Sbjct: 457 CSEGMLDEAMEIFSIMEENYCRPDVDNFNALILGLCKCRKTDLSLMVFEMMVKKGYMPNE 516
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQM 232
Y ++ ++ A ++++
Sbjct: 517 TTYTIIVEGIAHQEEMELAAAVLKEL 542
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 174/359 (48%), Gaps = 8/359 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI A C+ L+ M +G PD T+NSLI G R L + DL +M G
Sbjct: 135 LIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRG 194
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
D SY +L+ + G+ DEA +F++M D+ T ++ GLC + L
Sbjct: 195 FSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMY----THAALVKGLCDAGRGEEGL 250
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + +++ G+ P Y L+ C+ + A IL E+ DSG P +T T ++
Sbjct: 251 CMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAY 310
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + + + +M+ KG + + Y ++ F G++ +A ++QM GV+ D+
Sbjct: 311 CREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDV 370
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN LI C +G + +A+ LL ME G D+YT+ +LID LCK G + A +
Sbjct: 371 VTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDG 430
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
+ G N +N +++ L K GK D A E+M D++TYS + NLCK K
Sbjct: 431 LEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTK 489
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 180/374 (48%), Gaps = 8/374 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++AYC+ + MR G P+V TYN+++ G + ++ LLD+M E
Sbjct: 305 IVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMREC 364
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV +YN L+ G A R+ + M L T+N++++ LCK D A
Sbjct: 365 GVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEA 424
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F GL+ G P VT+N +I GLCKAG+ A L+ + +G+AP+ TY+ ++
Sbjct: 425 CSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIEN 484
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + GL + M +K Y VI AT QMV+ G D
Sbjct: 485 LCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPD 544
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+Y T + YC EG+L+ A ++ EM+K D + LIDG G A L+
Sbjct: 545 VVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILK 604
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDH----AINVFESMEVKDSFTYSSMVHNLCKAK 356
+M + N + ++ L + +H A +V++++E+ D F + L K
Sbjct: 605 HMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFE----LFELMKKN 660
Query: 357 RLPSASKLLLSCLK 370
+PS+++ LS L+
Sbjct: 661 SVPSSARTYLSILE 674
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 161/348 (46%), Gaps = 4/348 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D +C+ + ILN M ++G+ P VVT ++ R +S ++ + + M G
Sbjct: 271 LVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKG 330
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+VW+YN+++ GK +A + M + P T+N+++ G C + + +A
Sbjct: 331 CEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAF 390
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ R ++ +G + TYN+LI LCK G++ A + L G PN++T+ T++
Sbjct: 391 RLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGL 450
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K+ + L M GY D + Y I K +E ++++M+ V+
Sbjct: 451 CKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPST 510
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y +IN E A + +M QG D T+T + C G + A +
Sbjct: 511 VNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTE 570
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTY 345
M K + AYN ++D G+ D A+ + + M + + FT+
Sbjct: 571 MKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTF 618
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 167/363 (46%), Gaps = 9/363 (2%)
Query: 34 YNSLIAGATRNSLLSCSLDLLDEMLEMGIP-PDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
+ SL+ +R +L L L M P P +YN+L+ L + A R M
Sbjct: 96 FRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLM 155
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
+ P TFN ++ G C+ + + A +F + GF + V+Y LI+G C+AGR+
Sbjct: 156 VRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRI 215
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
A + +E+ P+ T+ ++K + + GL +L MK G+ Y +
Sbjct: 216 DEALELFREMTQ----PDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAAL 271
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
+ + + + +EA + +M G+ +V+ ++N YC+EG++ A + + M +G
Sbjct: 272 VDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGC 331
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
E + +T+ ++ G C AG + A L+ M + G + ++ YN ++ DG I A
Sbjct: 332 EPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFR 391
Query: 333 VFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
+ ME D +TY+ ++ LCK ++ A L G+R V++GL
Sbjct: 392 LLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLC 451
Query: 389 HSG 391
+G
Sbjct: 452 KAG 454
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 158/407 (38%), Gaps = 55/407 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDA C+ D ++ + + GI P+ VT+N++I G + + L+ M+
Sbjct: 410 VLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISA 469
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD ++Y+ + L + E +M+ D+ P T + I++N L R A
Sbjct: 470 GYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLA 529
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD--------------SG 166
R++ + G P++VTY ++ C GRL A ++ E+ G
Sbjct: 530 TRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDG 589
Query: 167 HA---------------------PNAITY--------------TTIMKCCFRNRKYKLG- 190
H PN T+ +K + +L
Sbjct: 590 HTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELAD 649
Query: 191 -LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
E+ MK+ Y +++ F + RL E T + M + + L+ YN L+N
Sbjct: 650 VFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVN 709
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
+CK A+ LL M GF + + L+ GL G A+ +++
Sbjct: 710 CFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNT 769
Query: 310 NLEAYNCIVDRLGKDGKID---HAINVFESMEVKDS-FTYSSMVHNL 352
+ + I+D + G D I++ E M+ K S TY+ + L
Sbjct: 770 DEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTEEL 816
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 202/442 (45%), Gaps = 39/442 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++A C S D +L + G PDVV+YN+++ G C +L++EM+ M
Sbjct: 197 LVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRM 256
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PP++ ++N+L+ L + G + + V M TP + +++G+CK + A
Sbjct: 257 ACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVA 316
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS--------------- 165
+ + +G P +V YN L+KGLC A R +L E+ D
Sbjct: 317 HEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDF 376
Query: 166 --------------------GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
G P+ ITYTT++ + + +L +M G +
Sbjct: 377 FCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPN 436
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y V+ R +A D M QM+ G L+ +++NTLIN CK+G +E A LL
Sbjct: 437 TISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLK 496
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+M G D +++ +IDGL KAG A L M G N Y+ I L ++G
Sbjct: 497 QMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREG 556
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+I+ I +F++++ D+ Y++++ +LCK A + L + SG +S
Sbjct: 557 RINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYT 616
Query: 382 AVVDGLRHSGCRREAKKIQSKI 403
++ GL G +EA+++ +++
Sbjct: 617 ILIRGLASEGFVKEAQEMLTEL 638
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 181/369 (49%), Gaps = 4/369 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++A C+ F + +L + G + DV N ++ + +L LL ++
Sbjct: 162 VILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSF 221
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV SYN+++ L + + ++M+ P TFN +++ LC+N +
Sbjct: 222 GCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERV 281
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + +HG P++ Y +I G+CK G L+ A IL + G PN + Y T++K
Sbjct: 282 HEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKG 341
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+++ E+L+ M K D + ++ F + G + + +EQM+ G D
Sbjct: 342 LCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPD 401
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++Y T+IN +CKEG ++ A +LL M G + + ++TI++ GLC A A +
Sbjct: 402 VITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMS 461
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
M + G N +N +++ L K G ++ AI + + M V D +YS+++ L KA
Sbjct: 462 QMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 521
Query: 357 RLPSASKLL 365
+ A +LL
Sbjct: 522 KTDEALELL 530
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 156/349 (44%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ + ILNRM G+ P+VV YN+L+ G + +LL EM +
Sbjct: 303 IIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKD 362
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P D ++N L+ Q G D + + M+ P T+ ++NG CK D A+
Sbjct: 363 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAV 422
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P ++Y I++KGLC A R A ++ ++ G N IT+ T++
Sbjct: 423 MLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFL 482
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + +E+L M G + D Y TVI K G+ EA + + MV G+ +
Sbjct: 483 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNT 542
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ Y+++ + +EG++ + D ++ D + +I LCK G + A L Y
Sbjct: 543 IIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAY 602
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVH 350
M G N Y ++ L +G + A + + K + M H
Sbjct: 603 MVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKH 651
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 163/362 (45%), Gaps = 15/362 (4%)
Query: 34 YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
YN+++AG R L + L + +PP+ ++Y ++ L G+ +A V +M
Sbjct: 93 YNAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 94 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 153
P ++++L C+ +A+R+ L G ++ N+++ +C G +
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 154 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
A +L++L G P+ ++Y ++K +++ E++ M R + + T+I
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ + G + + + QM G DI Y T+I+ CKEG L+ A+ +L+ M G +
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE----AYNCIVDRLGKDGKIDH 329
+ + L+ GLC A + L M FD + +N +VD ++G +D
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEM----FDKDCPLDDVTFNILVDFFCQNGLVDR 385
Query: 330 AINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 385
I + E M V D TY+++++ CK + A LL S G + + V+
Sbjct: 386 VIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLK 445
Query: 386 GL 387
GL
Sbjct: 446 GL 447
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 123/442 (27%), Positives = 202/442 (45%), Gaps = 49/442 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ + D Y + M + GI PDVVTY ++I G + L + + +M++ G
Sbjct: 209 VINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNG 268
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++ +YN L+H +GK E R+ ++M G P T+ +LN LCKN A
Sbjct: 269 VKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREAR 328
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN----AITYTTI 177
F + G P + TY I++ G G L +L + +G +PN I ++
Sbjct: 329 FFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAY 388
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
KC ++ ++I + M+++G + D Y +I A K+GR+ +A QM+ +GV
Sbjct: 389 AKCGIIDK----AMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGV 444
Query: 238 QLDIVSYNTLI------------------------------------NLYCKEGKLEAAY 261
DIV +++L+ NL CKEG++
Sbjct: 445 TPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNL-CKEGRVMEGQ 503
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
L+D +E G D ++ LIDG C AG I A LE M +G + +YN ++
Sbjct: 504 RLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGY 563
Query: 322 GKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
K G+ID A + F M TY++++H L + KR A +L L+ + SG +
Sbjct: 564 CKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDI 623
Query: 378 SAQKAVVDGLRHSGCRREAKKI 399
+++GL S C EA K+
Sbjct: 624 YTYNIILNGLCKSNCVDEAIKM 645
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 193/407 (47%), Gaps = 4/407 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ Y + + +LN M GISP+ +N + + ++ ++D+ ++M +
Sbjct: 348 IMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQ 407
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD SY +L+ L +LG+ D+A F MI +TP F+ ++ GLC +
Sbjct: 408 GLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKV 467
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G P +V +N ++ LCK GR+ + ++ + G P+ I+Y T++
Sbjct: 468 EELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDG 527
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++L M G D F Y T++ + K GR+ A + +M+++G+
Sbjct: 528 HCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPG 587
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YNT+++ + + A L M G + D YT+ I+++GLCK+ + A +
Sbjct: 588 VVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQ 647
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ G N+ +N ++ L K G+ + A+++F ++ V++ TY +V NL +
Sbjct: 648 NLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEG 707
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L L + K+G A+V L H G A SK+
Sbjct: 708 SLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKL 754
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 198/441 (44%), Gaps = 39/441 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ FD + +M + G+ P++ TYN LI G + +L+EM G
Sbjct: 244 VIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGG 303
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML------------- 108
P+ +Y SL++ L + G+ EA F MI + P T+ IML
Sbjct: 304 PKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMH 363
Query: 109 --------NGLCKNRYT--------------DNALRMFRGLQKHGFVPELVTYNILIKGL 146
NG+ N + D A+ +F +++ G P+ V+Y LI L
Sbjct: 364 DLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDAL 423
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK GR+ A ++ + G P+ + +++++ K++ E+ M G +
Sbjct: 424 CKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNI 483
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ T++ K GR+ E ++ + GV+ D++SYNTLI+ +C G ++ A LL+
Sbjct: 484 VFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEG 543
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M G + D +++ L+ G CKAG I A H M G + YN I+ L + +
Sbjct: 544 MVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKR 603
Query: 327 IDHA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
A +N+ S D +TY+ +++ LCK+ + A K+ + G+++
Sbjct: 604 FSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNI 663
Query: 383 VVDGLRHSGCRREAKKIQSKI 403
++ L G + +A + + I
Sbjct: 664 MIGALLKGGRKEDAMDLFAAI 684
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 187/395 (47%), Gaps = 17/395 (4%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI---PPDVWSYNSLM 73
+L RM E G PD V+YN L+ G +L+LL M + + PP+V SY++++
Sbjct: 151 VLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVI 210
Query: 74 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 133
+ F G+ D+ +F +M+ + P T+ +++GLCK + D A +F+ + +G
Sbjct: 211 NGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVK 270
Query: 134 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 193
P + TYN LI G G+ + +L+E+ G PN TY +++ +N + +
Sbjct: 271 PNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFF 330
Query: 194 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 253
+M KG Y ++ + G L E D + MV +G+ + +N + Y K
Sbjct: 331 FDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAK 390
Query: 254 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
G ++ A + ++M +QG D ++ LID LCK G + A + M G ++
Sbjct: 391 CGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVV 450
Query: 314 YN------CIVDRLGKDGKIDHAINVFESMEV---KDSFTYSSMVHNLCKAKRLPSASKL 364
++ C VD+ K ++ FE + V + +++++ NLCK R+ +L
Sbjct: 451 FSSLVYGLCTVDKWEKVEEL-----FFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRL 505
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ S GVR + ++DG +G EA K+
Sbjct: 506 VDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKL 540
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 117/468 (25%), Positives = 204/468 (43%), Gaps = 73/468 (15%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATR------------------ 43
LIDA C+ D N+M G++PD+V ++SL+ G
Sbjct: 419 LIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVG 478
Query: 44 --------NSLLSCSL----------DLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPD 83
N++L C+L L+D + MG+ PDV SYN+L+ HCL G D
Sbjct: 479 IHPNIVFFNTIL-CNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCL--AGTID 535
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
EA+++ + M+ L P + ++N +L+G CK D+A FR + +G P +VTYN ++
Sbjct: 536 EASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTIL 595
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
GL + R A+ + + +SG + TY I+ ++ +++ + KG
Sbjct: 596 HGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQ 655
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
+ + +I A +K GR ++A D + +G+ ++V+Y ++ +EG LE L
Sbjct: 656 LNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSL 715
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
MEK G + L+ L G+I A +L +++ F + ++
Sbjct: 716 FSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSS 775
Query: 324 DG----------------------------KIDHAINVFESMEVK----DSFTYSSMVHN 351
D +ID A ++F M +K D TY++++H
Sbjct: 776 DEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHG 835
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L + R A +L LS + S ++ +++GL S C EA K+
Sbjct: 836 LFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKM 883
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 197/469 (42%), Gaps = 67/469 (14%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C + D +L M G+ PD +YN+L+ G + + + +ML G
Sbjct: 524 LIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNG 583
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P V +YN+++H LFQ + EA ++ +MI T+NI+LNGLCK+ D A+
Sbjct: 584 ITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAI 643
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGR-------------------LRTARWILKEL 162
+MF+ L G ++T+NI+I L K GR + T R +++ L
Sbjct: 644 KMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENL 703
Query: 163 GDSGH----------------APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
+ G APN+ +++ LS + + ++ +
Sbjct: 704 IEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEA 763
Query: 207 FGYCTVIAAFV----------------------------KIGRLKEATDYMEQMVTDGVQ 238
+I+ F K R+ +A +M+ G+
Sbjct: 764 STTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLT 823
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D+V+YNT+++ + G+ A L M + + YT+ I+++GLCK+ + A
Sbjct: 824 PDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKM 883
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 354
+ + G N+ +N ++ L K G+ + A+++F ++ V D TY + NL +
Sbjct: 884 FQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIE 943
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L L L+ KSG + A+V L G A SK+
Sbjct: 944 EGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKL 992
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 179/384 (46%), Gaps = 6/384 (1%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
GI P V TY ++ G LS DLL+ M+ GI P+ +N + G D+A
Sbjct: 338 GIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKA 397
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+F M L+P ++ +++ LCK D+A F + G P++V ++ L+ G
Sbjct: 398 MDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYG 457
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LC + + E+ + G PN + + TI+ + + G ++ +++ G D
Sbjct: 458 LCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPD 517
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y T+I G + EA+ +E MV+ G++ D SYNTL++ YCK G++++AY
Sbjct: 518 VISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFR 577
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+M G T+ ++ GL + A+ L+L +N G ++ YN I++ L K
Sbjct: 578 KMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINS-GTKWDIYTYNIILNGLCKS 636
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
+D AI +F+++ K + T++ M+ L K R A L + +G+
Sbjct: 637 NCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTY 696
Query: 381 KAVVDGLRHSGCRREAKKIQSKIR 404
+ VV+ L G E + S +
Sbjct: 697 RLVVENLIEEGSLEEFDSLFSAME 720
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 146/346 (42%), Gaps = 53/346 (15%)
Query: 47 LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ-------LGKPDEANRVFQDMICG---D 96
L +L L DE+L P V ++N L+ + + + + +F M+
Sbjct: 30 LGDALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIK 89
Query: 97 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 156
+ P T++I++ C+ + ++ F + K G+ + + N L+ GLC R+ A
Sbjct: 90 VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149
Query: 157 -WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 215
+L+ + + G P+ ++Y ++K G C
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLK----------------------------GLCNE--- 178
Query: 216 FVKIGRLKEATDYMEQMVTDGV---QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
R +EA + + M D V ++VSY+T+IN + EG+++ Y L EM +G
Sbjct: 179 ----KRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGI 234
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
D T+T +IDGLCKA A + M G N++ YNC++ GK +
Sbjct: 235 PPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVR 294
Query: 333 VFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
+ E M + TY S+++ LCK R A S + G++
Sbjct: 295 MLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIK 340
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 108/260 (41%), Gaps = 41/260 (15%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D Y++ M G++PDVVTYN+++
Sbjct: 808 DDAYSLFREMLMKGLTPDVVTYNTIL---------------------------------- 833
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
H LFQ G+ EA ++ MI T+NI+LNGLCK+ D A +MF+ L G
Sbjct: 834 -HGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGL 892
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
++T+NI+I L K GR A + + +G P+ +TY + + +
Sbjct: 893 QLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDG 952
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ M++ G D ++ ++ G + A Y+ ++ L+ + + LI+L+
Sbjct: 953 LFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFS 1012
Query: 253 K------EGKLEAAYLLLDE 266
+ L Y LL+E
Sbjct: 1013 RGEYQHHAKSLPEKYRLLNE 1032
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/409 (18%), Positives = 161/409 (39%), Gaps = 11/409 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++ C+ D + + G+ +++T+N +I + ++DL +
Sbjct: 628 IILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPAN 687
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ +V +Y ++ L + G +E + +F M P + N ++ L A
Sbjct: 688 GLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 747
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + F E T ++LI A+ + K+ N + ++K
Sbjct: 748 GAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKY----RILNEANSSALIK- 802
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ R+ + M KG T D Y T++ + GR EA + M+ Q++
Sbjct: 803 --KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMN 860
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I +YN ++N CK ++ A+ + + +G + + T I+I L K G + A
Sbjct: 861 IYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFA 920
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
+ G ++ Y + + L ++G ++ +F +ME DS +++V L +
Sbjct: 921 AIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRG 980
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
+ A L + + S ++ + AK + K R+
Sbjct: 981 DISRAGAYLSKLDEKNFSLEASTTSELISLFSRGEYQHHAKSLPEKYRL 1029
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 211/442 (47%), Gaps = 51/442 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ D + M+ GI PDV++Y +LI G + + L +EML++
Sbjct: 463 IIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDV 522
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PDV + + L+ L + GK EAN++ + +I T ++ GLC A
Sbjct: 523 GIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKA 582
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE-LGDSGH-----APNAITY 174
++F +QK G +P +VT L+KGLC++G ++ A + K L D+ PNAI+Y
Sbjct: 583 TQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISY 642
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
+ I+ + + E+ MK G D Y ++I F + G+ K+A +MV
Sbjct: 643 SIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVD 702
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLD----------------------------- 265
GVQ D+ +++ LI++ CKEGK+ A LL+
Sbjct: 703 IGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISE 762
Query: 266 ------EMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIG-----FDSNLEA 313
+M+K G D T+ L+ GLC+ GNIK A LH + ++ G F ++ +
Sbjct: 763 ATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVIS 822
Query: 314 YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 369
Y+ I+D L K G+ D A +F+ M+ + + +Y+S++H C++ +L A L +
Sbjct: 823 YSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMV 882
Query: 370 KSGVRILKSAQKAVVDGLRHSG 391
GV++ ++ G G
Sbjct: 883 DQGVQLNAVTYSVMIHGFCKEG 904
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 154/274 (56%), Gaps = 8/274 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ D + M+ G+ PDV++Y SLI G R+ + L +EM+++
Sbjct: 644 IIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDI 703
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV +++ L+ L + GK EAN + + MI P T T+ ++ GLC N A
Sbjct: 704 GVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEA 763
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE-LGDSGH-----APNAITY 174
++F +QK G +P++VTY L+KGLC+ G ++TA + K+ L D+G P+ I+Y
Sbjct: 764 TQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISY 823
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
+ I+ ++ + E+ MK G + Y ++I F + G+L++A +MV
Sbjct: 824 SIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVD 883
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
GVQL+ V+Y+ +I+ +CKEG+++ A L +ME
Sbjct: 884 QGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKME 915
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 184/381 (48%), Gaps = 17/381 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLID C+ +L M + G D+VTY++LI G +S + L M ++
Sbjct: 59 MLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKL 118
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG------DLTPCTATFNIMLNGLCKN 114
G PD +Y +LM L Q G + A ++ Q+M+ P +++I+++GLCK+
Sbjct: 119 GCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKD 178
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
R D A +F+ ++ G +P++++Y LI G C +G+ A+ + E+ D G P+ T
Sbjct: 179 RREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTS 238
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
++ + K E+L M +G D Y T+I R+ EAT M
Sbjct: 239 GVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKK 298
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM----EKQGFEC---DKYTHTILIDGLC 287
G + D ++Y TL+ C+ GK+ A L EM + G +C D T ++LID LC
Sbjct: 299 LGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILC 358
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSF 343
K G + A LE M + G ++ Y+ ++ L + +I A +F SM+ D+
Sbjct: 359 KEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAI 418
Query: 344 TYSSMVHNLCKAKRLPSASKL 364
TY +++ LC+ + A +L
Sbjct: 419 TYGTLMKGLCQTGNINIALQL 439
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 202/425 (47%), Gaps = 22/425 (5%)
Query: 2 LIDAYCQF----VSFDAGYTILNRMREAGIS--PDVVTYNSLIAGATRNSLLSCSLDLLD 55
L+ CQ ++ +LN GI P +++Y+ +I G ++ + +L +
Sbjct: 423 LMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFE 482
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
EM GI PDV SY +L+H GK ++A +F +M+ + P T +++++ LCK
Sbjct: 483 EMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKG 542
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
A ++ + + G + ++VT L+KGLC R+ A + ++ G PN +T
Sbjct: 543 KVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCA 602
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTF------DGFGYCTVIAAFVKIGRLKEATDYM 229
T+MK ++ K+ LE+ M + + Y +I K GR EA +
Sbjct: 603 TLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELF 662
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
++M GV D++SY +LI+ +C+ GK + A L +EM G + D T ++LID LCK
Sbjct: 663 KEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKE 722
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 345
G + A LE M + G N Y +V L + +I A +F M+ + D TY
Sbjct: 723 GKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTY 782
Query: 346 SSMVHNLCKAKRLPSA----SKLLLSCLKSGVRILKS--AQKAVVDGLRHSGCRREAKKI 399
+++ LC+ + +A K+L + G + ++DGL G EA+++
Sbjct: 783 GTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEAREL 842
Query: 400 QSKIR 404
+++
Sbjct: 843 FKEMK 847
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 186/377 (49%), Gaps = 16/377 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ +L + + G DVVT +L+ G +S + L +M ++
Sbjct: 533 VLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKL 592
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG------DLTPCTATFNIMLNGLCKN 114
G P+V + +LM L Q G A + ++M+ + P +++I+++GLCK
Sbjct: 593 GCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKC 652
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D A +F+ ++ G +P++++Y LI G C++G+ + A+++ E+ D G P+ T+
Sbjct: 653 GREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTF 712
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
+ ++ + K E+L M ++G + Y T++ R+ EAT +M
Sbjct: 713 SVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQK 772
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ------GFECDKYTHTILIDGLCK 288
G D+V+Y TL+ C+ G ++ A L +M F+ D +++I+IDGLCK
Sbjct: 773 LGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCK 832
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 344
G AR + M +G N+ +Y ++ + GK++ A ++F M + ++ T
Sbjct: 833 HGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVT 892
Query: 345 YSSMVHNLCKAKRLPSA 361
YS M+H CK ++ A
Sbjct: 893 YSVMIHGFCKEGQIDKA 909
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 188/399 (47%), Gaps = 40/399 (10%)
Query: 22 MREAGISPDVVTYNSLI----------------AGATRNSLLSCSLDLLDEMLEMGIPPD 65
MR AG+ PD T+N LI AG R + +++ I PD
Sbjct: 1 MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIP-------DIVTYSIRPD 53
Query: 66 VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 125
V + + L+ L + GK EAN + + MI T++ ++ GLC A +F
Sbjct: 54 VTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFM 113
Query: 126 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE-LGDSGH-----APNAITYTTIMK 179
+QK G P+ +TY L+KGLC+ G + A + +E L D+G P I+Y+ I+
Sbjct: 114 SMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIID 173
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
++R+ E+ MK +G D Y ++I F G+ ++A +M+ G+Q
Sbjct: 174 GLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQP 233
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+ + LI+++CKEGK+ A LL+ M +G D T++ LI GLC I A
Sbjct: 234 DVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLF 293
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----------VKDSFTYSSMV 349
M K+G + AY ++ L + GKI+ A+++ + M ++ T SSM+
Sbjct: 294 MSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSML 353
Query: 350 HN-LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ LCK ++ A++LL ++ G + ++ GL
Sbjct: 354 IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGL 392
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 196/418 (46%), Gaps = 28/418 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL--------- 51
+LI+ C + G + + G PD+VTY S+ T +S+L L
Sbjct: 15 ILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTY-SIRPDVTTSSMLIDILCKEGKVIEA 73
Query: 52 -DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 110
+LL+ M++ G D+ +Y++L+ L + EA +F M P T+ ++ G
Sbjct: 74 NELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKG 133
Query: 111 LCKNRYTDNALR----MFRGLQKHGF--VPELVTYNILIKGLCKAGRLRTARWILKELGD 164
LC+ + AL+ M ++G P L++Y+I+I GLCK R AR + KE+
Sbjct: 134 LCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKA 193
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
G P+ I+YT+++ + K++ + + M G D +I F K G++ E
Sbjct: 194 QGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIE 253
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A + +E MV G LDIV+Y+TLI C + ++ A L M+K G D + L+
Sbjct: 254 ANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMK 313
Query: 285 GLCKAGNIKGA-RLHLEYMNKIG------FDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
GLC+ G I A LH E +N ++ + ++D L K+GK+ A + E M
Sbjct: 314 GLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVM 373
Query: 338 E----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ D TYS+++ LC R+ A+ L +S K G R ++ GL +G
Sbjct: 374 IQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTG 431
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 175/349 (50%), Gaps = 14/349 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C + +M++ G P+VVT +L+ G ++ + +L+L ML
Sbjct: 569 LVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDT 628
Query: 62 IP------PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
P P+ SY+ ++ L + G+ DEA +F++M + P ++ +++G C++
Sbjct: 629 SPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSG 688
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
+A +F + G P++ T+++LI LCK G++ A +L+ + G PN +TYT
Sbjct: 689 KWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYT 748
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T++K N + ++ M++ G D Y T++ + G +K A + ++M++D
Sbjct: 749 TLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSD 808
Query: 236 GVQL------DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
Q D++SY+ +I+ CK G+ + A L EM+ G + ++T LI G C++
Sbjct: 809 TGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRS 868
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
G ++ A+ M G N Y+ ++ K+G+ID A+ F+ ME
Sbjct: 869 GKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL--FQKME 915
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 205/407 (50%), Gaps = 4/407 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++DA + +A +++ M G+ P +VTYNS++ G R+ + + ++ EM +
Sbjct: 196 VMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDF 255
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV S+ L+ ++G+ +EA +++++M + P +F+ ++ + D+A
Sbjct: 256 GVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHA 315
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ R ++ G VP+ V Y ++I G C+AG + A + E+ G P+ +TY T++
Sbjct: 316 MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 375
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ R+ +L+ M+ +G D + T+I + G+L +A + M+ ++ D
Sbjct: 376 LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 435
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+YNTLI+ C++G L+ A L D+M + + T++ILID C+ G ++ A L+
Sbjct: 436 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 495
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
M G N+ YN I+ + G + + M V D TY++++H K
Sbjct: 496 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 555
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++ A KLL K V+ +++G G +EA I K+
Sbjct: 556 KMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKM 602
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 164/308 (53%), Gaps = 2/308 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M+I +C+ + + M G PDVVTYN+L+ G + L + LL+EM E
Sbjct: 336 MVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER 395
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+PPD+ ++ +L+H GK D+A ++F M+ L P T+N +++G+C+ D A
Sbjct: 396 GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKA 455
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + P VTY+ILI C+ G++ A L E+ + G PN +TY +I+K
Sbjct: 456 NDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKG 515
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R+ G + L M + D Y T+I ++K ++ +A + M + VQ D
Sbjct: 516 YCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPD 575
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
+V+YN LIN + G ++ A + ++M +G E D+YT+ +I+G AGN K A +LH
Sbjct: 576 VVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHD 635
Query: 300 EYMNKIGF 307
E + + GF
Sbjct: 636 EMLQR-GF 642
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 178/361 (49%), Gaps = 4/361 (1%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 112
++ EM + + PDV ++N ++ F+ G + A + M+ L P T+N +L GLC
Sbjct: 178 VISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLC 237
Query: 113 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
++ D A +F+ + G P++ ++ ILI G C+ G + A I KE+ G P+ +
Sbjct: 238 RSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLV 297
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
+++ ++ R K + L M+ G DG Y VI F + G + +A ++M
Sbjct: 298 SFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM 357
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
V G D+V+YNTL+N CKE +L A LL+EM ++G D T T LI G C G +
Sbjct: 358 VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKL 417
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSM 348
A + M ++ YN ++D + + G +D A ++++ M ++ F TYS +
Sbjct: 418 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSIL 477
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+ + C+ ++ A L + G+ +++ G SG + +K K+ + K+
Sbjct: 478 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 537
Query: 409 S 409
S
Sbjct: 538 S 538
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 166/336 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + + D L MR G+ PD V Y +I G R L+S +L + DEM+ G
Sbjct: 302 LIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCG 361
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV +YN+L++ L + + +A + +M + P TF +++G C D AL
Sbjct: 362 CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKAL 421
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + P++VTYN LI G+C+ G L A + ++ PN +TY+ ++
Sbjct: 422 QLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSH 481
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + L M KG + Y ++I + + G + + ++++M+ + V D+
Sbjct: 482 CEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDL 541
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YNTLI+ Y KE K+ A+ LL+ MEK+ + D T+ +LI+G GN++ A E
Sbjct: 542 ITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEK 601
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M G + + Y +++ G A + + M
Sbjct: 602 MCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEM 637
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 178/410 (43%), Gaps = 39/410 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ C+ +D + + M + G++PDV ++ LI G R + +L + EM G
Sbjct: 232 VLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG 291
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+ S++ L+ + GK D A ++M C L P + +++ G C+ +AL
Sbjct: 292 IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDAL 351
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + G +P++VTYN L+ GLCK RL A +L E+ + G P+ T+TT++
Sbjct: 352 RVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGY 411
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD-------------- 227
K L++ M + D Y T+I + G L +A D
Sbjct: 412 CIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNH 471
Query: 228 ---------------------YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
++++M+ G+ +I++YN++I YC+ G + L +
Sbjct: 472 VTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQK 531
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M D T+ LI G K + A L M K ++ YN +++ G
Sbjct: 532 MMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGN 591
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
+ A +FE M K D +TY SM++ A A +L L+ G
Sbjct: 592 VQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 641
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 145/274 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ +LN MRE G+ PD+ T+ +LI G L +L L D ML
Sbjct: 372 LLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 431
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ +YN+L+ + + G D+AN ++ DM ++ P T++I+++ C+ ++A
Sbjct: 432 LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAF 491
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ G +P ++TYN +IKG C++G + + L+++ + +P+ ITY T++
Sbjct: 492 GFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGY 551
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K ++L+ M+++ D Y +I F G ++EA E+M G++ D
Sbjct: 552 IKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDR 611
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
+Y ++IN + G + A+ L DEM ++GF D
Sbjct: 612 YTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 176/378 (46%), Gaps = 4/378 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
I++ + + +P ++ LI T++ + + +L+ +P + N+L+ L
Sbjct: 73 IVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALS 132
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G P A ++ + + T T NIM++ CK D + ++K P++V
Sbjct: 133 RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 192
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T+N+++ +AG A ++ + G P +TY +++K R+ + E+ M
Sbjct: 193 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 252
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
G D + +I F ++G ++EA ++M G++ D+VS++ LI L+ + GK+
Sbjct: 253 DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM 312
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A L EM G D +T++I G C+AG + A + M G ++ YN +
Sbjct: 313 DHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTL 372
Query: 318 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
++ L K+ ++ A + M + D T+++++H C +L A +L + L +
Sbjct: 373 LNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 432
Query: 374 RILKSAQKAVVDGLRHSG 391
R ++DG+ G
Sbjct: 433 RPDIVTYNTLIDGMCRQG 450
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 86/170 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID++C+ + + L+ M GI P+++TYNS+I G R+ +S L +M+
Sbjct: 476 ILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVN 535
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+ +YN+L+H + K +A ++ M + P T+N+++NG + A
Sbjct: 536 KVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEA 595
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
+F + G P+ TY +I G AG + A + E+ G AP+
Sbjct: 596 GWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 197/379 (51%), Gaps = 4/379 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ A +L ++ ++ +VV Y+++I G ++ L++ + L EM+
Sbjct: 163 ILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVK 222
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
IPP V +++SL++ +GK +A R+F +M+ ++ P TFNI+++ LCK A
Sbjct: 223 RIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEA 282
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K G P +VTYN L+ G C + A+ +L + APN+ +Y ++
Sbjct: 283 KNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMING 342
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + L + M +G Y ++I K GR+ A + +++M + + D
Sbjct: 343 FCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPAD 402
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+YN+LI+++CK ++ A L+ ++++ G + + T+ ILIDGLCK G +K A+ +
Sbjct: 403 IVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQ 462
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ G++ N YN +++ L K+G D A + ME + D+ TY +++ L
Sbjct: 463 DLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKD 522
Query: 357 RLPSASKLLLSCLKSGVRI 375
A KLL + GV +
Sbjct: 523 ENEKAQKLLREMVIKGVVV 541
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 182/379 (48%), Gaps = 6/379 (1%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G + VTY LI G + +L +L ++ + +V Y++++ L + +A
Sbjct: 153 GFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDA 212
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
++ +MI + P TF+ ++ G C +A R+F + P+ T+NIL+
Sbjct: 213 YGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDA 272
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMKRKGYTF 204
LCK G+++ A+ ++ + G P +TY T+M C N K +LS + R
Sbjct: 273 LCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGK-AKHVLSIISRMRVAP 331
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ Y +I F KI + EA +M G+ V+YN+LI+ CK G++ A+ L+
Sbjct: 332 NSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELV 391
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
DEM D T+ LID CK ++ A ++ + + G N+ YN ++D L K
Sbjct: 392 DEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKG 451
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
G++ +A +VF+ + +K +++TY+ M++ LCK A LL +G+
Sbjct: 452 GQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTY 511
Query: 381 KAVVDGLRHSGCRREAKKI 399
+ ++ L H +A+K+
Sbjct: 512 ETIIQALFHKDENEKAQKL 530
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 169/359 (47%), Gaps = 21/359 (5%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAG--ATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
D NRMR+ +P +V +N ++ T+N + L L +M G+ PD+++ +
Sbjct: 48 DNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTV-LSLSTQMESKGVKPDLFTLS 106
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
L++C LG+ A VF I+ GLC N + AL +
Sbjct: 107 ILINCYCHLGQMTFAFSVFA--------------KILKMGLCLNGKVNEALLFHDHVLAL 152
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
GF VTY ILI GLCK G+ R A +L+++ N + Y+TI+ +++
Sbjct: 153 GFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDA 212
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+ S M K + ++I F +G+ K+A +MV + D ++N L++
Sbjct: 213 YGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDA 272
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
CKEGK++ A ++ M K+G E T+ L+DG C + A+ L ++++ N
Sbjct: 273 LCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPN 332
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 365
+YN +++ K +D A+ +F M TY+S++ LCKA R+P A +L+
Sbjct: 333 SRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELV 391
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 109/207 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ +C+ D + + M GI+P VTYNSLI G + + + +L+DEM
Sbjct: 338 IMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNN 397
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
IP D+ +YNSL+ + D+A + + + + P T+NI+++GLCK NA
Sbjct: 398 CIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNA 457
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ L G+ TYNI+I GLCK G A +L ++ D+G P+A+TY TI++
Sbjct: 458 QDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQA 517
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGF 207
F + + ++L M KG F
Sbjct: 518 LFHKDENEKAQKLLREMVIKGVVVYAF 544
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 187/376 (49%), Gaps = 4/376 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ A +L R+ + P+VV YN++I + L++ + DL EM+ G
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 242
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV +YN+L+ +GK +A +F MI ++ P TFNI+++G CK R A
Sbjct: 243 ISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAK 302
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K G P++ TYN L+ C + A+ I + G PN +Y+ ++
Sbjct: 303 NVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGF 362
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +K + + M D Y ++I K+G++ A +++M GV D
Sbjct: 363 CKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDK 422
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN++++ CK +++ A LL +M+ +G + D T+T L+DGLCK G ++ AR+ E
Sbjct: 423 ITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFED 482
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G+ ++ Y ++ G D ++++ ME + ++ TY ++ +L
Sbjct: 483 LLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDE 542
Query: 358 LPSASKLLLSCLKSGV 373
A KLL + G+
Sbjct: 543 NDKAEKLLREMITRGL 558
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 199/408 (48%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ + Q +++L ++ + G P+V+T +LI G + +L D+++ +
Sbjct: 112 ILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVAL 171
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G + SY +L++ L ++G+ A ++ + + + P +N +++ +CK + + A
Sbjct: 172 GFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEA 231
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G P++VTYN LI G C G+++ A + ++ PN T+ ++
Sbjct: 232 FDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDG 291
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ R+ K +L+ M ++G D F Y +++ + + + +A + GV +
Sbjct: 292 FCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPN 351
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I SY+ +I+ +CK K++ A L EM D T+ LIDGLCK G I A ++
Sbjct: 352 IHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVD 411
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M+ G + YN I+D L K+ ++D AI + M+ + D TY+++V LCK
Sbjct: 412 EMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNG 471
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
RL A + L G + + A++ G G E+ + SK+
Sbjct: 472 RLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKME 519
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 181/374 (48%), Gaps = 5/374 (1%)
Query: 19 LNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
NR+ + P + + ++ +++ S + L +M GI D+ + L++C
Sbjct: 59 FNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFS 118
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
QLG+ + V ++ P T ++ GLC AL+ + GF V
Sbjct: 119 QLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKV 178
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
+Y LI GLCK G+ A +L+ + PN + Y TI+ + + ++ S M
Sbjct: 179 SYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 238
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
KG + D Y +I+ F +G++K+ATD +M+ + + ++ ++N L++ +CKE +L
Sbjct: 239 VSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRL 298
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A +L M KQG + D +T+ L+D C + A+ +++ G + N+ +Y+ +
Sbjct: 299 KEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIM 358
Query: 318 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ K K+D A+N+F+ M + D TY+S++ LCK ++ A KL+ GV
Sbjct: 359 IHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV 418
Query: 374 RILKSAQKAVVDGL 387
K +++D L
Sbjct: 419 PHDKITYNSILDAL 432
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 104/201 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I +C+ D + M I PDVVTYNSLI G + +S +L L+DEM +
Sbjct: 357 IMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDR 416
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+P D +YNS++ L + + D+A + M + P T+ +++GLCKN ++A
Sbjct: 417 GVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDA 476
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F L G++ ++ Y +I+G C G + +L ++ ++G PNA+TY I+
Sbjct: 477 RIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICS 536
Query: 181 CFRNRKYKLGLEILSAMKRKG 201
F + ++L M +G
Sbjct: 537 LFDKDENDKAEKLLREMITRG 557
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 205/407 (50%), Gaps = 4/407 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++DA + +A +++ M G+ P +VTYNS++ G R+ + + ++ EM +
Sbjct: 135 VMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDF 194
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV S+ L+ ++G+ +EA +++++M + P +F+ ++ + D+A
Sbjct: 195 GVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHA 254
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ R ++ G VP+ V Y ++I G C+AG + A + E+ G P+ +TY T++
Sbjct: 255 MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 314
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ R+ +L+ M+ +G D + T+I + G+L +A + M+ ++ D
Sbjct: 315 LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 374
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+YNTLI+ C++G L+ A L D+M + + T++ILID C+ G ++ A L+
Sbjct: 375 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 434
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
M G N+ YN I+ + G + + M V D TY++++H K
Sbjct: 435 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 494
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++ A KLL K V+ +++G G +EA I K+
Sbjct: 495 KMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKM 541
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 162/305 (53%), Gaps = 1/305 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M+I +C+ + + M G PDVVTYN+L+ G + L + LL+EM E
Sbjct: 275 MVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER 334
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+PPD+ ++ +L+H GK D+A ++F M+ L P T+N +++G+C+ D A
Sbjct: 335 GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKA 394
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + P VTY+ILI C+ G++ A L E+ + G PN +TY +I+K
Sbjct: 395 NDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKG 454
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R+ G + L M + D Y T+I ++K ++ +A + M + VQ D
Sbjct: 455 YCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPD 514
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
+V+YN LIN + G ++ A + ++M +G E D+YT+ +I+G AGN K A +LH
Sbjct: 515 VVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHD 574
Query: 300 EYMNK 304
E + +
Sbjct: 575 EMLQR 579
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 178/361 (49%), Gaps = 4/361 (1%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 112
++ EM + + PDV ++N ++ F+ G + A + M+ L P T+N +L GLC
Sbjct: 117 VISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLC 176
Query: 113 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
++ D A +F+ + G P++ ++ ILI G C+ G + A I KE+ G P+ +
Sbjct: 177 RSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLV 236
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
+++ ++ R K + L M+ G DG Y VI F + G + +A ++M
Sbjct: 237 SFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM 296
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
V G D+V+YNTL+N CKE +L A LL+EM ++G D T T LI G C G +
Sbjct: 297 VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKL 356
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSM 348
A + M ++ YN ++D + + G +D A ++++ M ++ F TYS +
Sbjct: 357 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSIL 416
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+ + C+ ++ A L + G+ +++ G SG + +K K+ + K+
Sbjct: 417 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 476
Query: 409 S 409
S
Sbjct: 477 S 477
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 166/336 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + + D L MR G+ PD V Y +I G R L+S +L + DEM+ G
Sbjct: 241 LIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCG 300
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV +YN+L++ L + + +A + +M + P TF +++G C D AL
Sbjct: 301 CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKAL 360
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + P++VTYN LI G+C+ G L A + ++ PN +TY+ ++
Sbjct: 361 QLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSH 420
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + L M KG + Y ++I + + G + + ++++M+ + V D+
Sbjct: 421 CEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDL 480
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YNTLI+ Y KE K+ A+ LL+ MEK+ + D T+ +LI+G GN++ A E
Sbjct: 481 ITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEK 540
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M G + + Y +++ G A + + M
Sbjct: 541 MCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEM 576
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 181/417 (43%), Gaps = 39/417 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ C+ +D + + M + G++PDV ++ LI G R + +L + EM G
Sbjct: 171 VLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG 230
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+ S++ L+ + GK D A ++M C L P + +++ G C+ +AL
Sbjct: 231 IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDAL 290
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + G +P++VTYN L+ GLCK RL A +L E+ + G P+ T+TT++
Sbjct: 291 RVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGY 350
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD-------------- 227
K L++ M + D Y T+I + G L +A D
Sbjct: 351 CIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNH 410
Query: 228 ---------------------YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
++++M+ G+ +I++YN++I YC+ G + L +
Sbjct: 411 VTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQK 470
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M D T+ LI G K + A L M K ++ YN +++ G
Sbjct: 471 MMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGN 530
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
+ A +FE M K D +TY SM++ A A +L L+ G ++A
Sbjct: 531 VQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKEKRRAA 587
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 176/378 (46%), Gaps = 4/378 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
I++ + + +P ++ LI T++ + + +L+ +P + N+L+ L
Sbjct: 12 IVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALS 71
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G P A ++ + + T T NIM++ CK D + ++K P++V
Sbjct: 72 RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 131
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T+N+++ +AG A ++ + G P +TY +++K R+ + E+ M
Sbjct: 132 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 191
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
G D + +I F ++G ++EA ++M G++ D+VS++ LI L+ + GK+
Sbjct: 192 DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM 251
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A L EM G D +T++I G C+AG + A + M G ++ YN +
Sbjct: 252 DHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTL 311
Query: 318 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
++ L K+ ++ A + M + D T+++++H C +L A +L + L +
Sbjct: 312 LNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 371
Query: 374 RILKSAQKAVVDGLRHSG 391
R ++DG+ G
Sbjct: 372 RPDIVTYNTLIDGMCRQG 389
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID++C+ + + L+ M GI P+++TYNS+I G R+ +S L +M+
Sbjct: 415 ILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVN 474
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+ +YN+L+H + K +A ++ M + P T+N+++NG + A
Sbjct: 475 KVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEA 534
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+F + G P+ TY +I G AG + A + E+ G
Sbjct: 535 GWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 202/408 (49%), Gaps = 6/408 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ +C +++RM E PD+VT ++LI G +S +L L+D M+E G
Sbjct: 146 LVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG 205
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +Y +++ L + G A +F+ M ++ ++I+++ LCK+ D+AL
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 265
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ G ++VTY+ LI GLC G+ +L+E+ P+ +T++ ++
Sbjct: 266 SLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 325
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K E+ + M +G D Y ++I F K L EA + MV+ G + DI
Sbjct: 326 VKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDI 385
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y+ LIN YCK +++ L E+ +G + T+ L+ G C++G + A+ +
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 445
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKAK 356
M G ++ Y ++D L +G+++ A+ +FE M+ K T Y+ ++H +C A
Sbjct: 446 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ-KSRMTLGIGIYNIIIHGMCNAS 504
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++ A L S GV+ ++ GL G EA + K++
Sbjct: 505 KVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 184/372 (49%), Gaps = 7/372 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID+ C+ SFD ++ N M GI DVVTY+SLI G + +L EM+
Sbjct: 250 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 309
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PDV ++++L+ + GK EA ++ +MI + P T T+N +++G CK A
Sbjct: 310 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEA 369
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+MF + G P++VTY+ILI CKA R+ + +E+ G PN ITY T++
Sbjct: 370 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 429
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K E+ M +G Y ++ G L +A + E+M + L
Sbjct: 430 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 489
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I YN +I+ C K++ A+ L + +G + D T+ ++I GLCK G++ A +
Sbjct: 490 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFR 549
Query: 301 YMNKIGFDSNLEAYNCIV-DRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKA 355
M + G + YN ++ LG G I ++ + E M+V DS T MV ++
Sbjct: 550 KMKEDGCTPDDFTYNILIRAHLGGSGLI-SSVELIEEMKVCGFSADSSTI-KMVIDMLSD 607
Query: 356 KRLPSASKLLLS 367
+RL + +LS
Sbjct: 608 RRLDKSFLDMLS 619
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 195/413 (47%), Gaps = 39/413 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ YC+ +++L R + G PD +T+++L+ G +S ++ L+D M+EM
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PD+ + ++L++ L G+ EA + M+ P T+ +LN LCK+ + A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +FR +++ +V Y+I+I LCK G A
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA------------------------- 264
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
L + + M+ KG D Y ++I G+ + + +M+ + D
Sbjct: 265 ----------LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+++ LI+++ KEGKL A L +EM +G D T+ LIDG CK + A +
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G + ++ Y+ +++ K ++D + +F + K ++ TY+++V C++
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 434
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+L +A +L + GV ++DGL +G +A +I K++ ++++
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 173/374 (46%), Gaps = 4/374 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ +M E I VV Y+ +I ++ +L L +EM GI DV +Y+SL+ L
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
GK D+ ++ ++MI ++ P TF+ +++ K A ++ + G P+ +
Sbjct: 292 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 351
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN LI G CK L A + + G P+ +TY+ ++ + ++ G+ + +
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 411
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
KG + Y T++ F + G+L A + ++MV+ GV +V+Y L++ C G+L
Sbjct: 412 SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL 471
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A + ++M+K + I+I G+C A + A ++ G ++ YN +
Sbjct: 472 NKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVM 531
Query: 318 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ L K G + A +F M+ D FTY+ ++ L S+ +L+ G
Sbjct: 532 IGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGF 591
Query: 374 RILKSAQKAVVDGL 387
S K V+D L
Sbjct: 592 SADSSTIKMVIDML 605
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 146/299 (48%), Gaps = 5/299 (1%)
Query: 109 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
NG+ + D A+ +F + + +P + +N L + + + K + +G
Sbjct: 44 NGIVDIKVND-AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIE 102
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
+ T T ++ C R +K +L + GY D + T++ F GR+ EA
Sbjct: 103 HDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVAL 162
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+++MV + D+V+ +TLIN C +G++ A +L+D M + GF+ D+ T+ +++ LCK
Sbjct: 163 VDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCK 222
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 344
+GN A M + +++ Y+ ++D L KDG D A+++F ME+K D T
Sbjct: 223 SGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 282
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
YSS++ LC + +K+L + + A++D G EAK++ +++
Sbjct: 283 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 202/408 (49%), Gaps = 6/408 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ +C +++RM E PD+VT ++LI G +S +L L+D M+E G
Sbjct: 175 LVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG 234
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +Y +++ L + G A +F+ M ++ ++I+++ LCK+ D+AL
Sbjct: 235 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 294
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ G ++VTY+ LI GLC G+ +L+E+ P+ +T++ ++
Sbjct: 295 SLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 354
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K E+ + M +G D Y ++I F K L EA + MV+ G + DI
Sbjct: 355 VKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDI 414
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y+ LIN YCK +++ L E+ +G + T+ L+ G C++G + A+ +
Sbjct: 415 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 474
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKAK 356
M G ++ Y ++D L +G+++ A+ +FE M+ K T Y+ ++H +C A
Sbjct: 475 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ-KSRMTLGIGIYNIIIHGMCNAS 533
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++ A L S GV+ ++ GL G EA + K++
Sbjct: 534 KVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 581
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 184/372 (49%), Gaps = 7/372 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID+ C+ SFD ++ N M GI DVVTY+SLI G + +L EM+
Sbjct: 279 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 338
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PDV ++++L+ + GK EA ++ +MI + P T T+N +++G CK A
Sbjct: 339 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEA 398
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+MF + G P++VTY+ILI CKA R+ + +E+ G PN ITY T++
Sbjct: 399 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 458
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K E+ M +G Y ++ G L +A + E+M + L
Sbjct: 459 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 518
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I YN +I+ C K++ A+ L + +G + D T+ ++I GLCK G++ A +
Sbjct: 519 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFR 578
Query: 301 YMNKIGFDSNLEAYNCIVD-RLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKA 355
M + G + YN ++ LG G I ++ + E M+V DS T MV ++
Sbjct: 579 KMKEDGCTPDDFTYNILIRAHLGGSGLI-SSVELIEEMKVCGFSADSSTI-KMVIDMLSD 636
Query: 356 KRLPSASKLLLS 367
+RL + +LS
Sbjct: 637 RRLDKSFLDMLS 648
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 195/413 (47%), Gaps = 39/413 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ YC+ +++L R + G PD +T+++L+ G +S ++ L+D M+EM
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PD+ + ++L++ L G+ EA + M+ P T+ +LN LCK+ + A
Sbjct: 199 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 258
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +FR +++ +V Y+I+I LCK G A
Sbjct: 259 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA------------------------- 293
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
L + + M+ KG D Y ++I G+ + + +M+ + D
Sbjct: 294 ----------LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 343
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+++ LI+++ KEGKL A L +EM +G D T+ LIDG CK + A +
Sbjct: 344 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 403
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G + ++ Y+ +++ K ++D + +F + K ++ TY+++V C++
Sbjct: 404 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 463
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+L +A +L + GV ++DGL +G +A +I K++ ++++
Sbjct: 464 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 516
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 173/374 (46%), Gaps = 4/374 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ +M E I VV Y+ +I ++ +L L +EM GI DV +Y+SL+ L
Sbjct: 261 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 320
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
GK D+ ++ ++MI ++ P TF+ +++ K A ++ + G P+ +
Sbjct: 321 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 380
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN LI G CK L A + + G P+ +TY+ ++ + ++ G+ + +
Sbjct: 381 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 440
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
KG + Y T++ F + G+L A + ++MV+ GV +V+Y L++ C G+L
Sbjct: 441 SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL 500
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A + ++M+K + I+I G+C A + A ++ G ++ YN +
Sbjct: 501 NKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVM 560
Query: 318 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ L K G + A +F M+ D FTY+ ++ L S+ +L+ G
Sbjct: 561 IGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGF 620
Query: 374 RILKSAQKAVVDGL 387
S K V+D L
Sbjct: 621 SADSSTIKMVIDML 634
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 146/299 (48%), Gaps = 5/299 (1%)
Query: 109 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
NG+ + D A+ +F + + +P + +N L + + + K + +G
Sbjct: 73 NGIVDIKVND-AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIE 131
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
+ T T ++ C R +K +L + GY D + T++ F GR+ EA
Sbjct: 132 HDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVAL 191
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+++MV + D+V+ +TLIN C +G++ A +L+D M + GF+ D+ T+ +++ LCK
Sbjct: 192 VDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCK 251
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 344
+GN A M + +++ Y+ ++D L KDG D A+++F ME+K D T
Sbjct: 252 SGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 311
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
YSS++ LC + +K+L + + A++D G EAK++ +++
Sbjct: 312 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 370
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 184/365 (50%), Gaps = 5/365 (1%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G +P V+ YN+++ + SL S + D ML G+ P+V++YN L+ L G EA
Sbjct: 118 GYAPSVLAYNAVLLALSDASLPS-ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
V +DM P T+N ++ C+ D A R+ +++ G P LVT+N ++ G
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
+CKAGR+ AR + E+ G AP+ ++Y T++ + L + + M RKG D
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ ++I K G L+ A + +M G+Q++ +++ LI+ +CK+G L+ A L +
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM + + + LI+G C G + AR + M G ++ Y+ I+ K+G
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNG 416
Query: 326 KIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
A + + M + D+ TYSS++ LC+ KRL A L + + G++ +
Sbjct: 417 DTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYT 476
Query: 382 AVVDG 386
+++DG
Sbjct: 477 SLIDG 481
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 121/456 (26%), Positives = 213/456 (46%), Gaps = 54/456 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A+C+ D +++ MRE G+ P++VT+NS++ G + + + + DEM++ G
Sbjct: 198 LVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEG 257
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTP------------CTA------- 102
+ PD SYN+L+ ++G EA VF +M + P C A
Sbjct: 258 LAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAV 317
Query: 103 ----------------TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
TF +++G CK + D+AL R +++ P +V YN LI G
Sbjct: 318 GLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGY 377
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C GR+ AR +++E+ G P+ +TY+TI+ +N ++ M G D
Sbjct: 378 CMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDA 437
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y ++I + RL +A + M++ G+Q D V+Y +LI+ +CKEG +E A L DE
Sbjct: 438 ITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDE 497
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGAR------LHLEYMN-KIGFD--------SNL 311
M K G D T+++LI+GL K+ K A+ H E + I +D + L
Sbjct: 498 MVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAEL 557
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLS 367
++ ++ G ++ A V++S+ + D YS ++H C+ + A
Sbjct: 558 KSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQ 617
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L+ G ++ +++ GL G EA ++ ++
Sbjct: 618 MLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQL 653
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 194/397 (48%), Gaps = 4/397 (1%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
S + + M G++P+V TYN L+ +L +L +M G P+ +YN
Sbjct: 137 SLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYN 196
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+L+ + G+ D A R+ M G L P TFN ++NG+CK ++A ++F + K
Sbjct: 197 TLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKE 256
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G P+ V+YN L+ G CK G A + E+ G P+ +T+T+++ + +
Sbjct: 257 GLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERA 316
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+ ++ M+ +G + + +I F K G L +A + +M +Q +V YN LIN
Sbjct: 317 VGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALING 376
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
YC G+++ A L+ EME +G + D T++ ++ CK G+ A + M + G +
Sbjct: 377 YCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPD 436
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLL 366
Y+ ++ L ++ ++ A +F++M D TY+S++ CK + A L
Sbjct: 437 AITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHD 496
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+K+GV +++GL S +EA+++ K+
Sbjct: 497 EMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKL 533
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 165/336 (49%), Gaps = 20/336 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC D ++ M G+ PDVVTY+++++ +N + L +MLE G
Sbjct: 373 LINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENG 432
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y+SL+ L + + +A+ +F++MI L P T+ +++G CK + AL
Sbjct: 433 VLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERAL 492
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K G +P++VTY++LI GL K+ R + A+ +L +L P I Y +M+CC
Sbjct: 493 SLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCC 552
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
RN + K L +L KG+ G + EA + ++ LD
Sbjct: 553 -RNAELKSVLALL-----KGFCMKGL--------------MNEADKVYQSILDRNWNLDG 592
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
Y+ LI+ +C+EG + A +M + GF + + LI GL + G + A ++
Sbjct: 593 SVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQ 652
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
+ ++ EA ++D K+G +D ++V M
Sbjct: 653 LLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGM 688
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 125/282 (44%), Gaps = 40/282 (14%)
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G+ P ++ YN ++ L A L +AR + G APN TY +++
Sbjct: 118 GYAPSVLAYNAVLLALSDAS-LPSARRFFDSMLSDGVAPNVYTYNILVR----------- 165
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
A G KEA + M G + V+YNTL+
Sbjct: 166 ------------------------ALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAA 201
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+C+ G+++ A L+D M + G + + T +++G+CKAG ++ AR + M K G +
Sbjct: 202 FCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPD 261
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
+YN +V K G A++VF M K D T++S++H +CKA L A L+
Sbjct: 262 GVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVR 321
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+ G+++ + A++DG G +A ++R +I
Sbjct: 322 EMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRI 363
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 195/417 (46%), Gaps = 30/417 (7%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD------ 55
L+ +YC + Y +LNRM G P V YN I L S DLLD
Sbjct: 352 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLP-SPDLLDLAEKIY 410
Query: 56 -EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
EML + + + CL +GK D+A ++ ++M+ P T+T++ ++ LC
Sbjct: 411 GEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHA 470
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
+ A +F+ ++ G P++ TY ILI CKAG + A+W+ +E+ G +P +TY
Sbjct: 471 TKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTY 530
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV- 233
T ++ + ++ +I M G + Y ++ K G + +A + +++
Sbjct: 531 TALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIG 590
Query: 234 -TDGVQLD--------------IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
+D D +V+Y L++ CK K++ A+ LLD M G E +
Sbjct: 591 TSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIV 650
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+ LIDG CKAG I A+ M K G+ ++ Y ++DR+ KDG++D A+ V M
Sbjct: 651 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM- 709
Query: 339 VKDS-----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
+KDS TY++M+ LC+ A KLL + G A++DGL S
Sbjct: 710 LKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGQS 766
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 175/396 (44%), Gaps = 15/396 (3%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
L R+++ G P VTYN+L+ + + + EM E G D ++ H L +
Sbjct: 197 LGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCK 256
Query: 79 LGK-PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
G+ D + + ++ D CT M++GL + Y D A+ ++ + +P +V
Sbjct: 257 EGRWADALDMIEREDFKLDTVLCTH----MISGLMEASYFDEAMSFLHRMRCNSCIPNVV 312
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY L+ G K +L + I+ + G PN + +++ + Y ++L+ M
Sbjct: 313 TYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRM 372
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKE------ATDYMEQMVTDGVQLDIVSYNTLINLY 251
G Y I + +L A +M+ L+ V+
Sbjct: 373 TTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCL 432
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
C GK + A+ L+ EM ++GF D T++ +I LC A ++ A L + M +G ++
Sbjct: 433 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 492
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
Y ++D K G I+ A +FE M TY++++H KAK++P A+ +
Sbjct: 493 YTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHR 552
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ +G R A+VDGL +G +A ++ +K+
Sbjct: 553 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 588
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 129/265 (48%), Gaps = 16/265 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID++C+ + + MR G SP VVTY +LI + + + D+ M++
Sbjct: 497 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 556
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-------------CGD---LTPCTATF 104
G P+ +Y +L+ L + G +A V+ +I C D L P T+
Sbjct: 557 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 616
Query: 105 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 164
+++GLCK D+A + + G P + Y+ LI G CKAG++ +A+ + ++
Sbjct: 617 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 676
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
G+ P+ TYT+++ F++ + L +++LS M + T + Y +I +IG ++
Sbjct: 677 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 736
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLIN 249
A + M G ++V+Y LI+
Sbjct: 737 ALKLLSLMEEKGCSPNVVTYTALID 761
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 159/396 (40%), Gaps = 26/396 (6%)
Query: 30 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 89
D V +I+G S ++ L M P+V +Y +L+ + + R+
Sbjct: 275 DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRII 334
Query: 90 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
M+ P + FN +++ C + A ++ + G P V YNI I +C
Sbjct: 335 NMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQ 394
Query: 150 GRLRT------ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
+L + A I E+ + N + +C K+ +++ M RKG+
Sbjct: 395 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 454
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y VI ++++A ++M GV D+ +Y LI+ +CK G +E A L
Sbjct: 455 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 514
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
+EM G T+T LI KA + A M G N Y +VD L K
Sbjct: 515 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 574
Query: 324 DGKIDHAINVFESM----EVKDS----------------FTYSSMVHNLCKAKRLPSASK 363
G I A V+ + + DS TY ++V LCKA ++ A +
Sbjct: 575 AGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 634
Query: 364 LLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
LL + L SG A++DG +G A+++
Sbjct: 635 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 670
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 171/437 (39%), Gaps = 62/437 (14%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L R R G D V L GA R++ C+ L ++G Y++L L
Sbjct: 95 VLRRCR--GFLTDSVVVAVL--GAVRDAPELCARFFLWAERQVGYSHTGACYDALADALG 150
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
G+ +A R+ +++ D N+++ C+ + AL L+ G+ P V
Sbjct: 151 FDGRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKV 210
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG--LEILS 195
TYN L++ L AG++ + KE+ +SG + T CF + K G + L
Sbjct: 211 TYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVG-----CFAHALCKEGRWADALD 265
Query: 196 AMKRKGYTFDG-----------------------------------FGYCTVIAAFVKIG 220
++R+ + D Y T+++ F+K
Sbjct: 266 MIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKK 325
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
+L + M+T+G + +N+L++ YC E AY LL+ M G +
Sbjct: 326 QLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYN 385
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD---------GKIDHAI 331
I I +C + L L+ KI + A NC+++++ GK D A
Sbjct: 386 IFIGSICGQEKLPSPDL-LDLAEKIY--GEMLAANCVLNKVNVANFARCLCGVGKFDKAF 442
Query: 332 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ + M V D+ TYS ++ LC A ++ A L GV ++D
Sbjct: 443 QLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSF 502
Query: 388 RHSGCRREAKKIQSKIR 404
+G +A+ + ++R
Sbjct: 503 CKAGLIEQAQWLFEEMR 519
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 186/387 (48%), Gaps = 8/387 (2%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P VV +N L+ + S + L +M I P+V++ L++CL + D +
Sbjct: 67 PPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNR-DHVHFA 125
Query: 89 FQ---DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
F M L P TF +LNGLC +A+++F + K GF P L+TY +IKG
Sbjct: 126 FSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKG 185
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCK G A +LK++ + G P+ + Y T++ ++R+ + S M +G +
Sbjct: 186 LCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPN 245
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y +++ F +G+L EAT +QM+ V + V++ L++ CKEG + A + +
Sbjct: 246 VVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFE 305
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M + G E D YT++ L+DG C + A+ + M GF ++ YN +++ K
Sbjct: 306 MMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSR 365
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+++ A + M D+ TYS+++ C+A R A KL G+
Sbjct: 366 RLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYS 425
Query: 382 AVVDGLRHSGCRREAKKIQSKIRMAKI 408
++DGL G EA ++ ++ +KI
Sbjct: 426 ILLDGLCKHGHLDEAFRLLKAMQESKI 452
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 192/388 (49%), Gaps = 4/388 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C+ +L +M E G PDVV YN++I ++ + ++ EM++ G
Sbjct: 182 IIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQG 241
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
IPP+V +Y+S++H LG+ +EA +F+ MI ++ P T TF I+++GLCK A
Sbjct: 242 IPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEAR 301
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+F + ++G P+ TY+ L+ G C ++ A+ + + G AP+ Y ++
Sbjct: 302 RVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGH 361
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++R+ +LS M + T D Y T++ F + GR + A ++M + G+ D
Sbjct: 362 CKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDS 421
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y+ L++ CK G L+ A+ LL M++ E + ILI G+C G ++ AR
Sbjct: 422 ITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSN 481
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
+ G ++ Y ++ L K+G + A +F M V +S TY+ + +
Sbjct: 482 LFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGD 541
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVD 385
+A +L+ + G S + ++D
Sbjct: 542 PSNAVRLIEEMVGRGFSADSSTFQMLLD 569
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 178/357 (49%), Gaps = 4/357 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C + + + + G +P ++TY ++I G + + +L LL +M E G
Sbjct: 147 LLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKG 206
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV +YN+++ L + + +EA F +M+ + P T++ +L+G C + A
Sbjct: 207 CKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEAT 266
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ + +P VT+ IL+ GLCK G + AR + + + ++G P+A TY+ +M
Sbjct: 267 SLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGY 326
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ M KG+ Y +I K RL EA + +M + D
Sbjct: 327 CLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDT 386
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y+TL+ +C+ G+ + A L EM G D T++IL+DGLCK G++ A L+
Sbjct: 387 VTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKA 446
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
M + + ++ YN ++ + GK++ A +F ++ VK TY+ M+ L K
Sbjct: 447 MQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLK 503
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 180/386 (46%), Gaps = 4/386 (1%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
++ L +M + G+ P VT+ +L+ G + + ++ L DE+ +MG P + +Y +++
Sbjct: 125 AFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIK 184
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
L ++G A ++ + M P +N +++ LCK+R + A+ F + G P
Sbjct: 185 GLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPP 244
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
+VTY+ ++ G C G+L A + K++ PN +T+T ++ + +
Sbjct: 245 NVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVF 304
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
M G D + Y ++ + ++ EA + MV G + YN LIN +CK
Sbjct: 305 EMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKS 364
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
+L A LL EM + D T++ L+ G C+AG + A+ + M G + Y
Sbjct: 365 RRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITY 424
Query: 315 NCIVDRLGKDGKIDHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLK 370
+ ++D L K G +D A + ++M+ ++ Y+ ++ +C +L +A +L +
Sbjct: 425 SILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFV 484
Query: 371 SGVRILKSAQKAVVDGLRHSGCRREA 396
G++ ++ GL G EA
Sbjct: 485 KGIQPSVVTYTVMISGLLKEGLSNEA 510
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 103/205 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ + T+L+ M + ++PD VTY++L+ G + + L EM
Sbjct: 356 ILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSY 415
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD +Y+ L+ L + G DEA R+ + M + P +NI++ G+C + A
Sbjct: 416 GLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAA 475
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F L G P +VTY ++I GL K G A + +++ +G PN+ TY ++
Sbjct: 476 RELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQG 535
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFD 205
RN + ++ M +G++ D
Sbjct: 536 FLRNGDPSNAVRLIEEMVGRGFSAD 560
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ D + +L M+E+ I P + YN LI G L + +L +
Sbjct: 426 ILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVK 485
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P V +Y ++ L + G +EA +F+ M+ P + T+N+ + G +N NA
Sbjct: 486 GIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNA 545
Query: 121 LRMFRGLQKHGFVPELVTYNILI 143
+R+ + GF + T+ +L+
Sbjct: 546 VRLIEEMVGRGFSADSSTFQMLL 568
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 56/109 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C F +A + + + GI P VVTY +I+G + L + + ++ +M+
Sbjct: 461 ILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVN 520
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 109
G P+ +YN + + G P A R+ ++M+ + ++TF ++L+
Sbjct: 521 GCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD 569
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 187/363 (51%), Gaps = 7/363 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HC 75
+ M + I ++ T+N I G R L+ + D +++M GI P+V +YN+L+ +C
Sbjct: 187 VYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYC 246
Query: 76 -LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
GK +A ++M+ + P TFN +++G CK+ A + F +QK G P
Sbjct: 247 KRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKP 306
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
+VTYN LI GLC G+L A + ++ G PN +TY ++ + + K ++
Sbjct: 307 NIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVF 366
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
+ ++ + + T+I A+ K G ++E M+ +G+ ++ +YN LI C++
Sbjct: 367 DDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRK 426
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
L+AA LL+EME +G + D T+ ILIDGLCK + A L M +G N Y
Sbjct: 427 QDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTY 486
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
N ++D +GK+ A+NV ME + + TY+ ++ CK +L +A+ LL L+
Sbjct: 487 NTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLE 546
Query: 371 SGV 373
G+
Sbjct: 547 KGL 549
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 154/281 (54%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ + A M++ G+ P++VTYNSLI G N L ++DL D+M+ +G
Sbjct: 279 LIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLG 338
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++ +YN+L++ + EA +VF D+ +L P TFN M++ CK +
Sbjct: 339 LKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGF 398
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G +P + TYN LI GLC+ L+ A+ +L E+ + G + +TY ++
Sbjct: 399 SLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGL 458
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N K + ++L+ M G + Y T++ + G+LK A + +M + Q ++
Sbjct: 459 CKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNV 518
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
V+YN LI YCK KLEAA LL+EM ++G ++ T+ I+
Sbjct: 519 VTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 164/319 (51%), Gaps = 3/319 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREA---GISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
L+D YC+ S Y M+E I P+ VT+N+LI G ++ ++ + +EM
Sbjct: 241 LVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQ 300
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
+ G+ P++ +YNSL++ L GK +EA ++ M+ L P T+N ++NG CK +
Sbjct: 301 KQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMK 360
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A ++F + K VP ++T+N +I CK G + + + D G PN TY ++
Sbjct: 361 EATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLI 420
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
R + + E+L+ M+ KG D Y +I K + + A + +M G++
Sbjct: 421 AGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLK 480
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+ V+YNTL++ YC EGKL+AA + MEK+ + + T+ +LI G CK ++ A
Sbjct: 481 PNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGL 540
Query: 299 LEYMNKIGFDSNLEAYNCI 317
L M + G + N Y+ +
Sbjct: 541 LNEMLEKGLNPNRTTYDIV 559
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 176/375 (46%), Gaps = 7/375 (1%)
Query: 37 LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 96
L+ +N L C+ + + G + S N L+ L + K + V+++MI
Sbjct: 136 LVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRR 195
Query: 97 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK---AGRLR 153
+ TFNI +NGLC+ + A ++ G P +VTYN L+ G CK AG++
Sbjct: 196 IHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMY 255
Query: 154 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
A +KE+ + PN +T+ T++ ++ + M+++G + Y ++I
Sbjct: 256 KAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLI 315
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
G+L+EA D ++MV G++ +IV+YN LIN +CK+ ++ A + D++ KQ
Sbjct: 316 NGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELV 375
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
+ T +ID CK G ++ M G N+ YNC++ L + + A +
Sbjct: 376 PNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKEL 435
Query: 334 FESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
ME K D TY+ ++ LCK + +A KLL G++ ++DG
Sbjct: 436 LNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCM 495
Query: 390 SGCRREAKKIQSKIR 404
G + A +++++
Sbjct: 496 EGKLKAALNVRTRME 510
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 200/425 (47%), Gaps = 52/425 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID + FD + IL ++ + I T++ LIA ++ + +++ +M +
Sbjct: 101 LVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDF 160
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV++YNS++H + Q A V+ M+ + P ATF I+LNGLCKN TD+A
Sbjct: 161 GCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDA 220
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L+MF + + G P + Y I++ GLC+A R +L + SG P++IT ++
Sbjct: 221 LKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDG 280
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + +L +++GY GY ++I + R E ++ +M G++ D
Sbjct: 281 FCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPD 340
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY----------------------- 277
+V Y LI +C+ G ++ A +L++M ++G D Y
Sbjct: 341 VVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQL 400
Query: 278 ------------THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
T+TILI G+C+ G + AR M +G ++ +N ++D L K G
Sbjct: 401 EISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAG 460
Query: 326 KIDHAINVFESME-----------------VKDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
+++ A ++F ME V D+ + +MV LC++ + A KLL+
Sbjct: 461 ELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQL 520
Query: 369 LKSGV 373
SGV
Sbjct: 521 ADSGV 525
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 171/389 (43%), Gaps = 19/389 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ CQ D + +LN M+ +G PD +T N+L+ G + + + LL +
Sbjct: 241 IILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKE 300
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G + Y+SL+ LF+ + DE + M + P + I++ G C+ D A
Sbjct: 301 GYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYA 360
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L M + + G P+ YN LIKG C G L AR + E+ + P + TYT ++
Sbjct: 361 LNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICG 420
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM-------- 232
RN +I + M+ G + + +I K G L+EA +M
Sbjct: 421 MCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSL 480
Query: 233 ---VTDGVQ--LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
++ G +D S T++ C+ G + AY LL ++ G D T+ +LI+G C
Sbjct: 481 FLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFC 540
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS 347
KA NI GA + G + Y ++D + + + A V + M VK+ T SS
Sbjct: 541 KAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQM-VKNGCTPSS 599
Query: 348 MVHNL-----CKAKRLPSASKLLLSCLKS 371
V+ C+ +L A L L L+S
Sbjct: 600 AVYKCLMTWSCRKGKLSVAFSLWLKYLRS 628
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 178/453 (39%), Gaps = 117/453 (25%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID + +D +M +AGI PDVV Y LI G ++ +L++L++M + G
Sbjct: 312 LIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRG 371
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD + YN+L+ +G D+A + ++ D P + T+ I++ G+C+N D A
Sbjct: 372 LSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEAR 431
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI----------------------- 158
++F ++ G P ++T+N LI GLCKAG L AR +
Sbjct: 432 QIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRV 491
Query: 159 -------------------------LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 193
L +L DSG P+ +TY ++ + + ++
Sbjct: 492 MDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKL 551
Query: 194 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 253
++ KG++ D Y T+I F ++ R ++A ++QMV +G Y L+ C+
Sbjct: 552 FRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCR 611
Query: 254 E----------------------------------GKLEAAYLLLDEM--EKQGFECDKY 277
+ G+LE A L EM + FE Y
Sbjct: 612 KGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPY 671
Query: 278 TH---------------------------------TILIDGLCKAGNIKGARLHLEYMNK 304
T +LI+GLCK GN++ A Y +
Sbjct: 672 TIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLE 731
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
GF N ++ L K+ HA+++ M
Sbjct: 732 KGFMLMPRICNQLLRSLILQDKMKHALDLLNRM 764
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 169/383 (44%), Gaps = 51/383 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG-------------------- 40
+LI +C+ D +LN M + G+SPD YN+LI G
Sbjct: 346 ILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKN 405
Query: 41 ---------------ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
RN LL + + ++M +G P + ++N+L+ L + G+ +EA
Sbjct: 406 DCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEA 465
Query: 86 NRVFQDMICG-------------DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+F M G D TA+ M+ LC++ A ++ L G
Sbjct: 466 RHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGV 525
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
VP+++TYN+LI G CKA + A + +EL GH+P+++TY T++ R + +
Sbjct: 526 VPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFR 585
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD-YMEQMVTDGVQLDIVSYNTLINLY 251
+L M + G T Y ++ + G+L A +++ + + Q D L +
Sbjct: 586 VLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQED--ETLKLAEEH 643
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
++G+LE A L EM + + +TI + GLC+A + A + + D N
Sbjct: 644 FEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNP 703
Query: 312 EAYNCIVDRLGKDGKIDHAINVF 334
+ +++ L KDG ++ A+++F
Sbjct: 704 PSCVMLINGLCKDGNLEMAVDIF 726
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/326 (19%), Positives = 147/326 (45%), Gaps = 4/326 (1%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
D ++ +++ ++ TF++++ K+ + A+ F ++ G P++ TYN +
Sbjct: 113 DTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSI 172
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
+ + + A + ++ + PN T+ ++ +N K L++ M +KG
Sbjct: 173 LHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGI 232
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
+ Y +++ + R + + M G D ++ N L++ +CK G+++ A+
Sbjct: 233 PPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFA 292
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
LL EK+G+ ++ LIDGL +A + M K G + ++ Y ++
Sbjct: 293 LLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFC 352
Query: 323 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
+ G +D+A+N+ M + D++ Y++++ C L A L L K+
Sbjct: 353 EVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSC 412
Query: 379 AQKAVVDGLRHSGCRREAKKIQSKIR 404
++ G+ +G EA++I +++
Sbjct: 413 TYTILICGMCRNGLLDEARQIFNQME 438
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 132/306 (43%), Gaps = 4/306 (1%)
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
T N++++ L K+ D ++ L+ T+++LI K+G A +
Sbjct: 97 VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ D G P+ TY +I+ + + L L + + M + Y + + ++ K G+
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
+A ++M G+ + + Y +++ C+ + + + LL+ M+ G D T
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN----VFESM 337
L+DG CK G I A L+ K G+ ++ Y+ ++D L + + D +F++
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336
Query: 338 EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
D Y+ ++ C+ + A +L + G+ A++ G G +A+
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396
Query: 398 KIQSKI 403
+Q +I
Sbjct: 397 SLQLEI 402
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 117/278 (42%), Gaps = 1/278 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ Y +L ++ ++G+ PD++TYN LI G + ++ + L E+ G
Sbjct: 500 MVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKG 559
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +Y +L+ ++ + ++A RV M+ TP +A + ++ C+ A
Sbjct: 560 HSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAF 619
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + E T + + K G L A L E+ + YT +
Sbjct: 620 SLWLKYLRSLPSQEDETLKLAEEHFEK-GELEKAVRCLLEMNFKLNNFEIAPYTIWLIGL 678
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R+ + L+I +K + +I K G L+ A D + G L
Sbjct: 679 CQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMP 738
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
N L+ + K++ A LL+ M G++ D+Y H
Sbjct: 739 RICNQLLRSLILQDKMKHALDLLNRMNSAGYDLDEYLH 776
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 194/406 (47%), Gaps = 16/406 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMRE-AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+D C+ + +L +M E + I P+VV Y+++I G ++ S S +L EM +
Sbjct: 223 FVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDK 282
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P++ +YN ++ G+ A R+ Q+M+ ++P T+N ++N K A
Sbjct: 283 GIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEA 342
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G +P +TYN +I G CK RL A + + G +P+ T+TT++
Sbjct: 343 AELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDG 402
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ G+E+L M R+G + Y T+I F +G L A D +QM++ GV D
Sbjct: 403 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 462
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEK-----------QGFECDKYTHTILIDGLCKA 289
IV+ NTL++ C GKL+ A + M+K G E D T+ ILI GL
Sbjct: 463 IVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINE 522
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 345
G A E M G + Y+ ++D L K ++D A +F SM K + T+
Sbjct: 523 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTF 582
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+++++ CKA R+ +L + G+ ++ G R G
Sbjct: 583 NTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVG 628
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 181/387 (46%), Gaps = 15/387 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ + + M++ GI P++VTYN +I G + S + LL EMLE
Sbjct: 259 IIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERK 318
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V +YN+L++ + GK EA ++ +M+ + P T T+N M++G CK D A
Sbjct: 319 ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 378
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
MF + G P++ T+ LI G C A R+ +L E+ G N +TY T++
Sbjct: 379 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGF 438
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT------- 234
L++ M G D T++ G+LK+A + + M
Sbjct: 439 CLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDA 498
Query: 235 ----DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+GV+ D+++YN LI EGK A L +EM +G D T++ +IDGLCK
Sbjct: 499 SHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 558
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 346
+ A M F N+ +N +++ K G++D + +F M V D+ Y
Sbjct: 559 RLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYI 618
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGV 373
++++ K + A + + SGV
Sbjct: 619 TLIYGFRKVGNINGALDIFQEMISSGV 645
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 179/380 (47%), Gaps = 17/380 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C + A +L M E ISP+VVTYN+LI + + +L DEML G
Sbjct: 294 MIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRG 353
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+ +YNS++ + + D A +F M +P TF +++G C + D+ +
Sbjct: 354 IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGM 413
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G V VTYN LI G C G L A + +++ SG P+ +T T++
Sbjct: 414 ELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 473
Query: 182 FRNRKYKLGLEILSAMKRK-----------GYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
N K K LE+ AM++ G D Y +I + G+ EA + E
Sbjct: 474 CDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYE 533
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+M G+ D ++Y+++I+ CK+ +L+ A + M + F + T LI+G CKAG
Sbjct: 534 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAG 593
Query: 291 NI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTY 345
+ G L E M + G ++ Y ++ K G I+ A+++F+ M D+ T
Sbjct: 594 RVDDGLELFCE-MGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITI 652
Query: 346 SSMVHNLCKAKRLPSASKLL 365
+M+ + L A +L
Sbjct: 653 RNMLTGFWSKEELERAVAML 672
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 189/376 (50%), Gaps = 9/376 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C + ++ + G+ PDVVT+ +L+ G + +S +LDL ++
Sbjct: 121 ILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR- 179
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV ++ +LM+ L + G+ EA + M+ L P T+ ++G+CK T +A
Sbjct: 180 ---PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSA 236
Query: 121 LRMFRGLQKHGFV-PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
L + R +++ + P +V Y+ +I GLCK GR + + E+ D G PN +TY ++
Sbjct: 237 LNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIG 296
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ ++ +L M + + + Y +I AFVK G+ EA + ++M+ G+
Sbjct: 297 GFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIP 356
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ ++YN++I+ +CK+ +L+AA + M +G D +T T LIDG C A I L
Sbjct: 357 NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELL 416
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKA 355
M + G +N YN ++ G ++ A+++ + M D T ++++ LC
Sbjct: 417 HEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 476
Query: 356 KRLPSASKLLLSCLKS 371
+L A ++ + KS
Sbjct: 477 GKLKDALEMFKAMQKS 492
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 192/412 (46%), Gaps = 9/412 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + D ++ +M I D+ ++ LI S L +L ++ ++G
Sbjct: 87 LMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLG 146
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV ++ +L+H L + EA +F IC P TF ++NGLC+ A+
Sbjct: 147 LHPDVVTFTTLLHGLCLDHRVSEALDLFHQ-IC---RPDVLTFTTLMNGLCREGRVVEAV 202
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH-APNAITYTTIMKC 180
+ + ++G P+ +TY + G+CK G +A +L+++ + H PN + Y+ I+
Sbjct: 203 ALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDG 262
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ ++ + M+ KG + Y +I F GR A +++M+ + +
Sbjct: 263 LCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPN 322
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YN LIN + KEGK A L DEM +G + T+ +IDG CK + A
Sbjct: 323 VVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFY 382
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M G ++ + ++D +ID + + M V ++ TY++++H C
Sbjct: 383 LMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVG 442
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
L +A L + SGV ++DGL +G ++A ++ ++ +K+
Sbjct: 443 DLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 139/278 (50%), Gaps = 11/278 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC D G +L+ M G+ + VTYN+LI G L+ +LDL +M+ G
Sbjct: 399 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 458
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-----------ICGDLTPCTATFNIMLNG 110
+ PD+ + N+L+ L GK +A +F+ M + P T+NI++ G
Sbjct: 459 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICG 518
Query: 111 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
L A ++ + G VP+ +TY+ +I GLCK RL A + +G +PN
Sbjct: 519 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPN 578
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
+T+ T++ + + GLE+ M R+G D Y T+I F K+G + A D +
Sbjct: 579 VVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQ 638
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
+M++ GV D ++ ++ + + +LE A +L++++
Sbjct: 639 EMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 162/351 (46%), Gaps = 11/351 (3%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P V+ +N L+ R + L +M I D++S+ L+ C K A
Sbjct: 79 PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 138
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
F + L P TF +L+GLC + AL +F + + P+++T+ L+ GLC+
Sbjct: 139 FGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMNGLCR 194
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
GR+ A +L + ++G P+ ITY T + + L +L M+ +
Sbjct: 195 EGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVV 254
Query: 209 -YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y +I K GR ++ + +M G+ +IV+YN +I +C G+ AA LL EM
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEM 314
Query: 268 EKQGFECDKYTHTILIDGLCKAGN-IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
++ + T+ LI+ K G + A L+ E + + G N YN ++D K +
Sbjct: 315 LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR-GIIPNTITYNSMIDGFCKQDR 373
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+D A ++F M K D FT+++++ C AKR+ +LL + G+
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGL 424
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 152/324 (46%), Gaps = 9/324 (2%)
Query: 47 LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 106
L ++DL +ML P V +N LM + ++ +PD ++Q M + +F I
Sbjct: 62 LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
++ C AL F L K G P++VT+ L+ GLC R+ A + ++
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC--- 178
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ +T+TT+M R + + +L M G D Y T + K+G A
Sbjct: 179 -RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237
Query: 227 DYMEQM-VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ + +M ++ ++V Y+ +I+ CK+G+ ++ L EM+ +G + T+ +I G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKD 341
C +G A+ L+ M + N+ YN +++ K+GK A +++ M + +
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357
Query: 342 SFTYSSMVHNLCKAKRLPSASKLL 365
+ TY+SM+ CK RL +A +
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMF 381
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 90/193 (46%), Gaps = 2/193 (1%)
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 277
+I L++A D M+ ++ +N L+ + + + L +ME++ CD Y
Sbjct: 58 EIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIY 117
Query: 278 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
+ TILI C + A + K+G ++ + ++ L D ++ A+++F +
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI 177
Query: 338 EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
D T++++++ LC+ R+ A LL +++G++ + VDG+ G A
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237
Query: 398 KIQSKIRMAKISH 410
+ K M +ISH
Sbjct: 238 NLLRK--MEEISH 248
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 184/393 (46%), Gaps = 5/393 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP-DVWSYNSLMHCLFQLG 80
+ AG PD +N + L ++ +L M G PP + +SYN ++ +++ G
Sbjct: 18 LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAG 77
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
+ +A VF +M + P T+N M++G K + R+ + HG P +TYN
Sbjct: 78 RGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYN 137
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
+L+ GLC+AGR+ +L E+ P+ TY+ + RN K L + +
Sbjct: 138 VLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKN 197
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G T + ++ K G++ A + ++ +V G+ V YNTLIN YC+ G+LE A
Sbjct: 198 GVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGA 257
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
+ +M+ + + D T+ LI+GLCKA I A+ L M G + +E +N ++D
Sbjct: 258 FSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDA 317
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
G+ G+++ V M+ + +Y S+V+ CK ++P A +L V
Sbjct: 318 YGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPN 377
Query: 377 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
A++D G +A + K++ IS
Sbjct: 378 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGIS 410
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 175/354 (49%), Gaps = 4/354 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + M E + P+ +TYN++I G + L L D+M+ G+ P+ +YN L+ L
Sbjct: 85 VFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLC 144
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G+ E + + +M + P T++I+ +GL +N + L +F K+G
Sbjct: 145 RAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDY 204
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T +IL+ GLCK G++ A +L+ L ++G P + Y T++ + + + M
Sbjct: 205 TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM 264
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K + D Y +I K R+ A D + +M +GV + ++NTLI+ Y + G+L
Sbjct: 265 KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 324
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
E +++L EM++ G + + ++ +++ CK G I A L+ M N + YN I
Sbjct: 325 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAI 384
Query: 318 VDRLGKDGKIDHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLS 367
+D + G D A + E M+ + S TY+ ++ LC ++ A +++ S
Sbjct: 385 IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINS 438
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 202/448 (45%), Gaps = 39/448 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID + + +AG+ + ++M G+ P+ +TYN L++G R + + LLDEM
Sbjct: 104 MIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQK 163
Query: 62 IPPDVWSYNSL------------MHCLF-----------------------QLGKPDEAN 86
+ PD ++Y+ L M LF + GK A
Sbjct: 164 MVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAE 223
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
V Q ++ L P +N ++NG C+ + A F ++ P+ +TYN LI GL
Sbjct: 224 EVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 283
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CKA R+ A+ +L E+ D+G P T+ T++ R + + +LS M+ G +
Sbjct: 284 CKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNV 343
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +++ AF K G++ EA ++ M V + YN +I+ Y + G + A++L+++
Sbjct: 344 VSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEK 403
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+ G T+ +LI GLC I A + ++ + +YN ++ G
Sbjct: 404 MKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGN 463
Query: 327 IDHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
ID A+++ + M +K + TY ++ L A RL L +++ V +
Sbjct: 464 IDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNI 523
Query: 383 VVDGLRHSGCRREAKKIQSKIRMAKISH 410
+V+ G +A+ ++ ++ + +H
Sbjct: 524 MVEAYSKYGNEIKAEDLRKEMLQKRNNH 551
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 184/393 (46%), Gaps = 5/393 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP-DVWSYNSLMHCLFQLG 80
+ AG PD +N + L ++ +L M G PP + +SYN ++ +++ G
Sbjct: 155 LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAG 214
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
+ +A VF +M + P T+N M++G K + R+ + HG P +TYN
Sbjct: 215 RGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYN 274
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
+L+ GLC+AGR+ +L E+ P+ TY+ + RN K L + +
Sbjct: 275 VLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKN 334
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G T + ++ K G++ A + ++ +V G+ V YNTLIN YC+ G+LE A
Sbjct: 335 GVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGA 394
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
+ +M+ + + D T+ LI+GLCKA I A+ L M G + +E +N ++D
Sbjct: 395 FSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDA 454
Query: 321 LGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
G+ G+++ V M+ + +Y S+V+ CK ++P A +L V
Sbjct: 455 YGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPN 514
Query: 377 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
A++D G +A + K++ IS
Sbjct: 515 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGIS 547
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 175/354 (49%), Gaps = 4/354 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + M E + P+ +TYN++I G + L L D+M+ G+ P+ +YN L+ L
Sbjct: 222 VFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLC 281
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G+ E + + +M + P T++I+ +GL +N + L +F K+G
Sbjct: 282 RAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDY 341
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T +IL+ GLCK G++ A +L+ L ++G P + Y T++ + + + M
Sbjct: 342 TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM 401
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K + D Y +I K R+ A D + +M +GV + ++NTLI+ Y + G+L
Sbjct: 402 KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 461
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
E +++L EM++ G + + ++ +++ CK G I A L+ M N + YN I
Sbjct: 462 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAI 521
Query: 318 VDRLGKDGKIDHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLS 367
+D + G D A + E M+ + S TY+ ++ LC ++ A +++ S
Sbjct: 522 IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINS 575
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 202/448 (45%), Gaps = 39/448 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID + + +AG+ + ++M G+ P+ +TYN L++G R + + LLDEM
Sbjct: 241 MIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQK 300
Query: 62 IPPDVWSYNSL------------MHCLF-----------------------QLGKPDEAN 86
+ PD ++Y+ L M LF + GK A
Sbjct: 301 MVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAE 360
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
V Q ++ L P +N ++NG C+ + A F ++ P+ +TYN LI GL
Sbjct: 361 EVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 420
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CKA R+ A+ +L E+ D+G P T+ T++ R + + +LS M+ G +
Sbjct: 421 CKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNV 480
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +++ AF K G++ EA ++ M V + YN +I+ Y + G + A++L+++
Sbjct: 481 VSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEK 540
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+ G T+ +LI GLC I A + ++ + +YN ++ G
Sbjct: 541 MKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGN 600
Query: 327 IDHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
ID A+++ + M +K + TY ++ L A RL L +++ V +
Sbjct: 601 IDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNI 660
Query: 383 VVDGLRHSGCRREAKKIQSKIRMAKISH 410
+V+ G +A+ ++ ++ + +H
Sbjct: 661 MVEAYSKYGNEIKAEDLRKEMLQKRNNH 688
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 140/354 (39%), Gaps = 77/354 (21%)
Query: 115 RYTDNALRMFRGL--QKHGFVPELVT---------------------------------- 138
R D ALR+ L + +P L +
Sbjct: 106 RLPDGALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTF 165
Query: 139 -YNILIKGLCKAGRLRTARWILKELG-DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+N ++ AG L A +L+ +G D PNA +Y ++ +R + +E+
Sbjct: 166 AWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDE 225
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M + + Y T+I +K G L+ +QMV G++ + ++YN L++ C+ G+
Sbjct: 226 MTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGR 285
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILID-------------------------------- 284
+ LLDEM Q D +T++IL D
Sbjct: 286 MGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSI 345
Query: 285 ---GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 340
GLCK G + A L+ + G YN +++ + G+++ A + F M+ +
Sbjct: 346 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 405
Query: 341 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
D TY+++++ LCKA+R+ +A LL+ +GV ++D +G
Sbjct: 406 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 459
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 127/482 (26%), Positives = 216/482 (44%), Gaps = 110/482 (22%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG-------------------- 40
+L+ +C + + L++M+ G+SPD VTYN+L+
Sbjct: 214 LLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKE 273
Query: 41 ------ATRNSLLSC---------SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
AT N+L+S + D+++ M G PD+W+YN L L Q GK DEA
Sbjct: 274 GIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEA 333
Query: 86 NRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
++ +M G ++P T+N +++ K + + +AL + +++ G LVT+NI++K
Sbjct: 334 FKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVK 393
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC----------------------- 181
GLC+ G+L A L+ + + G P+ ITY T++
Sbjct: 394 GLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKM 453
Query: 182 ------------FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK----------- 218
+ ++Y+ E+L A ++G+ D Y TV+AA+ K
Sbjct: 454 DTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLW 513
Query: 219 ------------------------IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
+G+L EA D + +++ G+ D +YN +I+ YCKE
Sbjct: 514 DEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKE 573
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
G LE A+ ++M + F+ D T L++GLC G ++ A E + G ++ Y
Sbjct: 574 GDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITY 633
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
N ++ L KD +D A+ F MEV+ D FTY+ ++ L +A R A K+L +
Sbjct: 634 NTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNE 693
Query: 371 SG 372
SG
Sbjct: 694 SG 695
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 213/442 (48%), Gaps = 40/442 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++A+C+ T+L RM++ GI P TYN+L++ R + + D+++ M G
Sbjct: 250 LLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFG 309
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PD+W+YN L L Q GK DEA ++ +M G ++P T+N +++ K + + +A
Sbjct: 310 FEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDA 369
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + +++ G LVT+NI++KGLC+ G+L A L+ + + G P+ ITY T++
Sbjct: 370 LNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDA 429
Query: 181 CFR-----------------------------------NRKYKLGLEILSAMKRKGYTFD 205
+ ++Y+ E+L A ++G+ D
Sbjct: 430 SCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPD 489
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y TV+AA+ K + + A ++M+ + I +YNTLI GKL A L+
Sbjct: 490 EVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLN 549
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
E+ + G D T+ I+I CK G+++ A M + F ++ N +++ L G
Sbjct: 550 ELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYG 609
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+++ A+ +FES K D TY++++ LCK + +A + G++
Sbjct: 610 RLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYN 669
Query: 382 AVVDGLRHSGCRREAKKIQSKI 403
++ L +G EA+K+ K+
Sbjct: 670 VLLSALSEAGRSVEAQKMLHKL 691
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 166/326 (50%), Gaps = 2/326 (0%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
+ P+ T+N L+ L+ +L L +M G+ PD +YN+L++ + G EA
Sbjct: 205 LHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 264
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ M + P AT+N +++ + + A + + GF P+L TYN+L GL
Sbjct: 265 TLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGL 324
Query: 147 CKAGRLRTARWILKELGDSG-HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
C+AG++ A + E+ G +P+ +TY T++ CF+ ++ L +L M+ KG
Sbjct: 325 CQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSS 384
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ ++ + G+L+EA +E M +G+ D+++YNTLI+ CK G + A++L+D
Sbjct: 385 LVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMD 444
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM + G + D +T L+ LCK + A L + GF + +Y ++ K+
Sbjct: 445 EMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEY 504
Query: 326 KIDHAINVFESMEVKDSFTYSSMVHN 351
K + A+ +++ M +K T S +N
Sbjct: 505 KPEPALCLWDEM-IKRKLTPSISTYN 529
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 191/433 (44%), Gaps = 54/433 (12%)
Query: 2 LIDA--YCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
L+DA CQ S DA +L MRE G+ +VT+N ++ G R L +L L+ M E
Sbjct: 356 LVDACFKCQRSS-DA-LNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTE 413
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G+ PDV +YN+L+ + G +A + +M+ L T T N +L LCK + +
Sbjct: 414 EGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEE 473
Query: 120 ALRMFRGLQKHGFVPELV-----------------------------------TYNILIK 144
A + R + GFVP+ V TYN LIK
Sbjct: 474 AEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIK 533
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
GL G+L A L EL + G P+ TY I+ + + + + M +
Sbjct: 534 GLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKP 593
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D T++ GRL++A E V G ++D+++YNTLI CK+ ++ A
Sbjct: 594 DVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFF 653
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG----------FDSNLEAY 314
+ME +G + D +T+ +L+ L +AG A+ L +N+ G S++EA
Sbjct: 654 ADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAV 713
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
GKD ++ I + + D +Y+ + LC +L A +L ++ G+
Sbjct: 714 ET-----GKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMS 768
Query: 375 ILKSAQKAVVDGL 387
+ S +++GL
Sbjct: 769 VDNSTYITLMEGL 781
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 156/318 (49%), Gaps = 11/318 (3%)
Query: 64 PDVWSYNSLMHCLFQLGK--PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + + N+++ L + P + F +I L P TFN++++ C +AL
Sbjct: 170 PSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADAL 229
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+Q G P+ VTYN L+ C+ G L AR +L + G P TY T++
Sbjct: 230 STLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAY 289
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA---TDYMEQMVTDGVQ 238
R K +++ AM G+ D + Y + A + G++ EA D MEQ+ V
Sbjct: 290 ARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGI--VS 347
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D+V+YNTL++ K + A LL+EM ++G + TH I++ GLC+ G ++ A
Sbjct: 348 PDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGR 407
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
LE M + G ++ YN ++D K G + A + + M D+FT +++++NLCK
Sbjct: 408 LEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCK 467
Query: 355 AKRLPSASKLLLSCLKSG 372
KR A +LL + + G
Sbjct: 468 EKRYEEAEELLRAPPQRG 485
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 143/289 (49%), Gaps = 3/289 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ AY + + + + M + ++P + TYN+LI G + L+ ++D L+E++EMG
Sbjct: 496 VMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMG 555
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +YN ++H + G ++A + M+ P T N ++NGLC + A+
Sbjct: 556 LVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAM 615
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + G +++TYN LI+ LCK + TA ++ G P+ TY ++
Sbjct: 616 KLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSAL 675
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF--VKIGRLKEATDYMEQMVTDGVQL 239
+ ++L + G + F Y ++ ++ V+ G+ E +E V +
Sbjct: 676 SEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIES-VGNTQGD 734
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
D SYN I C G+L+ A +LDEM ++G D T+ L++GL K
Sbjct: 735 DQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIK 783
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 118/240 (49%), Gaps = 3/240 (1%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
LN + E G+ PD TYN +I + L + ++M+E PDV + N+LM+ L
Sbjct: 548 LNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCL 607
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
G+ ++A ++F+ + T+N ++ LCK+ D ALR F ++ G P++ T
Sbjct: 608 YGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFT 667
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
YN+L+ L +AGR A+ +L +L +SG Y +I K + E+ S ++
Sbjct: 668 YNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSI-KSSVEAVETGKDPEVKSDIE 726
Query: 199 RKGYTF--DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
G T D Y I G+LKEA +++M+ G+ +D +Y TL+ K K
Sbjct: 727 SVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQK 786
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 194/406 (47%), Gaps = 16/406 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMRE-AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+D C+ + +L +M E + I P+VV Y+++I G ++ S S +L EM +
Sbjct: 223 FVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDK 282
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P++ +YN ++ G+ A R+ Q+M+ ++P T+N ++N K A
Sbjct: 283 GIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEA 342
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G +P +TYN +I G CK RL A + + G +P+ T+TT++
Sbjct: 343 AELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDG 402
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ G+E+L M R+G + Y T+I F +G L A D +QM++ GV D
Sbjct: 403 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 462
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEK-----------QGFECDKYTHTILIDGLCKA 289
IV+ NTL++ C GKL+ A + M+K G E D T+ ILI GL
Sbjct: 463 IVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINE 522
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 345
G A E M G + Y+ ++D L K ++D A +F SM K + T+
Sbjct: 523 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTF 582
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+++++ CKA R+ +L + G+ ++ G R G
Sbjct: 583 NTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVG 628
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 181/387 (46%), Gaps = 15/387 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ + + M++ GI P++VTYN +I G + S + LL EMLE
Sbjct: 259 IIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERK 318
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V +YN+L++ + GK EA ++ +M+ + P T T+N M++G CK D A
Sbjct: 319 ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 378
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
MF + G P++ T+ LI G C A R+ +L E+ G N +TY T++
Sbjct: 379 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGF 438
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT------- 234
L++ M G D T++ G+LK+A + + M
Sbjct: 439 CLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDA 498
Query: 235 ----DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+GV+ D+++YN LI EGK A L +EM +G D T++ +IDGLCK
Sbjct: 499 SHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 558
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 346
+ A M F N+ +N +++ K G++D + +F M V D+ Y
Sbjct: 559 RLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYI 618
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGV 373
++++ K + A + + SGV
Sbjct: 619 TLIYGFRKVGNINGALDIFQEMISSGV 645
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 179/380 (47%), Gaps = 17/380 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C + A +L M E ISP+VVTYN+LI + + +L DEML G
Sbjct: 294 MIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRG 353
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+ +YNS++ + + D A +F M +P TF +++G C + D+ +
Sbjct: 354 IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGM 413
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G V VTYN LI G C G L A + +++ SG P+ +T T++
Sbjct: 414 ELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 473
Query: 182 FRNRKYKLGLEILSAMKRK-----------GYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
N K K LE+ AM++ G D Y +I + G+ EA + E
Sbjct: 474 CDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYE 533
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+M G+ D ++Y+++I+ CK+ +L+ A + M + F + T LI+G CKAG
Sbjct: 534 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAG 593
Query: 291 NI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTY 345
+ G L E M + G ++ Y ++ K G I+ A+++F+ M D+ T
Sbjct: 594 RVDDGLELFCE-MGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITI 652
Query: 346 SSMVHNLCKAKRLPSASKLL 365
+M+ + L A +L
Sbjct: 653 RNMLTGFWSKEELERAVAML 672
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 189/376 (50%), Gaps = 9/376 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C + ++ + G+ PDVVT+ +L+ G + +S +LDL ++
Sbjct: 121 ILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR- 179
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV ++ +LM+ L + G+ EA + M+ L P T+ ++G+CK T +A
Sbjct: 180 ---PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSA 236
Query: 121 LRMFRGLQKHGFV-PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
L + R +++ + P +V Y+ +I GLCK GR + + E+ D G PN +TY ++
Sbjct: 237 LNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIG 296
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ ++ +L M + + + Y +I AFVK G+ EA + ++M+ G+
Sbjct: 297 GFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIP 356
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ ++YN++I+ +CK+ +L+AA + M +G D +T T LIDG C A I L
Sbjct: 357 NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELL 416
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKA 355
M + G +N YN ++ G ++ A+++ + M D T ++++ LC
Sbjct: 417 HEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 476
Query: 356 KRLPSASKLLLSCLKS 371
+L A ++ + KS
Sbjct: 477 GKLKDALEMFKAMQKS 492
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 192/412 (46%), Gaps = 9/412 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + D ++ +M I D+ ++ LI S L +L ++ ++G
Sbjct: 87 LMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLG 146
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV ++ +L+H L + EA +F IC P TF ++NGLC+ A+
Sbjct: 147 LHPDVVTFTTLLHGLCLDHRVSEALDLFHQ-IC---RPDVLTFTTLMNGLCREGRVVEAV 202
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH-APNAITYTTIMKC 180
+ + ++G P+ +TY + G+CK G +A +L+++ + H PN + Y+ I+
Sbjct: 203 ALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDG 262
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ ++ + M+ KG + Y +I F GR A +++M+ + +
Sbjct: 263 LCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPN 322
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YN LIN + KEGK A L DEM +G + T+ +IDG CK + A
Sbjct: 323 VVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFY 382
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M G ++ + ++D +ID + + M V ++ TY++++H C
Sbjct: 383 LMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVG 442
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
L +A L + SGV ++DGL +G ++A ++ ++ +K+
Sbjct: 443 DLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 141/283 (49%), Gaps = 11/283 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC D G +L+ M G+ + VTYN+LI G L+ +LDL +M+ G
Sbjct: 399 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 458
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-----------ICGDLTPCTATFNIMLNG 110
+ PD+ + N+L+ L GK +A +F+ M + P T+NI++ G
Sbjct: 459 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICG 518
Query: 111 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
L A ++ + G VP+ +TY+ +I GLCK RL A + +G +PN
Sbjct: 519 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPN 578
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
+T+ T++ + + GLE+ M R+G D Y T+I F K+G + A D +
Sbjct: 579 VVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQ 638
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+M++ GV D ++ ++ + + +LE A +L+++++ E
Sbjct: 639 EMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQRYQLE 681
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 162/351 (46%), Gaps = 11/351 (3%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P V+ +N L+ R + L +M I D++S+ L+ C K A
Sbjct: 79 PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 138
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
F + L P TF +L+GLC + AL +F + + P+++T+ L+ GLC+
Sbjct: 139 FGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMNGLCR 194
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
GR+ A +L + ++G P+ ITY T + + L +L M+ +
Sbjct: 195 EGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVV 254
Query: 209 -YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y +I K GR ++ + +M G+ +IV+YN +I +C G+ AA LL EM
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEM 314
Query: 268 EKQGFECDKYTHTILIDGLCKAGN-IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
++ + T+ LI+ K G + A L+ E + + G N YN ++D K +
Sbjct: 315 LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR-GIIPNTITYNSMIDGFCKQDR 373
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+D A ++F M K D FT+++++ C AKR+ +LL + G+
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGL 424
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 152/324 (46%), Gaps = 9/324 (2%)
Query: 47 LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 106
L ++DL +ML P V +N LM + ++ +PD ++Q M + +F I
Sbjct: 62 LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
++ C AL F L K G P++VT+ L+ GLC R+ A + ++
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC--- 178
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ +T+TT+M R + + +L M G D Y T + K+G A
Sbjct: 179 -RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237
Query: 227 DYMEQM-VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ + +M ++ ++V Y+ +I+ CK+G+ ++ L EM+ +G + T+ +I G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKD 341
C +G A+ L+ M + N+ YN +++ K+GK A +++ M + +
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357
Query: 342 SFTYSSMVHNLCKAKRLPSASKLL 365
+ TY+SM+ CK RL +A +
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMF 381
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 90/193 (46%), Gaps = 2/193 (1%)
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 277
+I L++A D M+ ++ +N L+ + + + L +ME++ CD Y
Sbjct: 58 EIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIY 117
Query: 278 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
+ TILI C + A + K+G ++ + ++ L D ++ A+++F +
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI 177
Query: 338 EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
D T++++++ LC+ R+ A LL +++G++ + VDG+ G A
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237
Query: 398 KIQSKIRMAKISH 410
+ K M +ISH
Sbjct: 238 NLLRK--MEEISH 248
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 197/400 (49%), Gaps = 4/400 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ + D +++L ++ + G+ P +VT+ +LI + + +++L D+M+
Sbjct: 138 ILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVAR 197
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV++Y ++++ L ++G+ A + + M P T++ +++ K+R + A
Sbjct: 198 GCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEA 257
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F ++ G P++ TYN LI+GLC + + A +L E+ P+ +T+ ++
Sbjct: 258 LDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDT 317
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K +L M G D Y +++ + + EA + M+T G + D
Sbjct: 318 ICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPD 377
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ SYN LIN YCK +++ A L +EM QG + ++ LI GLC+ G+++ AR +
Sbjct: 378 VFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFK 437
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAK 356
M+ G NL Y+ ++D K G A +F +M+ S Y+ ++ +CK+
Sbjct: 438 NMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSG 497
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
L A KL G++ +++GL G EA
Sbjct: 498 NLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEA 537
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 179/367 (48%), Gaps = 5/367 (1%)
Query: 4 DAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATR-NSLLSCSLDLLDEMLEMGI 62
D C F + D N M P ++ + L++ + + L +M G+
Sbjct: 70 DDACSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGL 129
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P++++ + L++C L + D A V +I L P TF ++N LCK A+
Sbjct: 130 SPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAME 189
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+F + G P++ TY +I GLCK G A +LK++ ++G PN +TY+TI+
Sbjct: 190 LFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHR 249
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
++R+ L+I S MK KG + D F Y ++I + KEA+ + +M + + DIV
Sbjct: 250 KDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIV 309
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
++N L++ CKEGK+ A +L M + G E D T++ L+ G + AR + M
Sbjct: 310 TFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAM 369
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRL 358
G ++ +YN +++ K +ID A +F M ++ +Y++++H LC+ L
Sbjct: 370 ITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSL 429
Query: 359 PSASKLL 365
A L
Sbjct: 430 REARNLF 436
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 187/368 (50%), Gaps = 4/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ A +L +M EAG P+VVTY+++I ++ ++ +LD+ M G
Sbjct: 209 IINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKG 268
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+++YNSL+ L + EA+ + +M ++ P TFN++++ +CK A
Sbjct: 269 ISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQ 328
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + + G P++VTY+ L+ G + AR + + G P+ +Y ++
Sbjct: 329 GVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGY 388
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ ++ + M +G T + Y T+I ++G L+EA + + M T+G ++
Sbjct: 389 CKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNL 448
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y+ L++ +CK+G A+ L M+ + + + ILID +CK+GN++ AR
Sbjct: 449 FTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSE 508
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G N + Y I++ L K+G +D A+ F +ME D +Y+ ++ K
Sbjct: 509 LFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKD 568
Query: 358 LPSASKLL 365
A +L+
Sbjct: 569 ESRAVQLI 576
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 138/275 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ +L M E G+ PDVVTY+SL+ G + S + + L D M+
Sbjct: 313 VLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITK 372
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV+SYN L++ ++ + DEA ++F +MI LTP ++N +++GLC+ A
Sbjct: 373 GCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREA 432
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ + +G +P L TY+IL+ G CK G A + + + + PN + Y ++
Sbjct: 433 RNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDA 492
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ + ++ S + KG + Y T+I K G L EA + M DG D
Sbjct: 493 MCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPD 552
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
+SYN +I + A L+ EM +GF D
Sbjct: 553 EISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIAD 587
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 68/138 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D +C+ F + + M+ P++V YN LI ++ L + L E+
Sbjct: 453 ILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVK 512
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ Y ++++ L + G DEA F++M P ++N+++ G ++ A
Sbjct: 513 GLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRA 572
Query: 121 LRMFRGLQKHGFVPELVT 138
+++ ++ GF+ ++ T
Sbjct: 573 VQLIGEMRDKGFIADVGT 590
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 5/174 (2%)
Query: 241 IVSYNTLINLYCKEGKL-EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
I+ + L++ K G+ + L +ME G + YT +ILI+ + A L
Sbjct: 97 IIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVL 156
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ K+G + + +++ L K GK A+ +F+ M + D +TY+++++ LCK
Sbjct: 157 AKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKI 216
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+A+ LL ++G + ++D R EA I S +++ IS
Sbjct: 217 GETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGIS 270
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 168/323 (52%), Gaps = 4/323 (1%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
PD +TY ++ + + +L ++EM GI PD + YN ++ L Q K +EA
Sbjct: 6 PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARL 65
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
+F+ M+ + P T+N ++NGLCK + A +F+ + G+VP V+YN LI G C
Sbjct: 66 LFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 125
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K L A+ + ++ S PN +TYTT++ ++ K + E+L M +KG T +
Sbjct: 126 KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVA 185
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y +I F K+ R+ EA +EQMVT G+ +V+YN L+N C+ KLE A+ L M
Sbjct: 186 TYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGM 245
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
++ T+ L+ LC + GA RL+ E + K G + Y+ + L + GK
Sbjct: 246 AQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAK-GCPPDAITYDTLAWGLTRAGK 304
Query: 327 IDHAINVFESMEV--KDSFTYSS 347
+ A + E M++ ++ F SS
Sbjct: 305 VHEAQELMEKMKLTKRNPFGRSS 327
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 154/307 (50%), Gaps = 4/307 (1%)
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
PPD +Y ++ L + + D+A ++M + P +N +L+GLC+ + A
Sbjct: 6 PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARL 65
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+F + K P +VTYN LI GLCKA R+ TA + KE+ G+ P ++Y T++
Sbjct: 66 LFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 125
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ + ++ M R + Y T+I K G+++ A + ++ MV GV ++
Sbjct: 126 KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVA 185
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
+Y+ LI+ +CK +++ A+ LL++M QG T+ IL++ LC+A ++ A M
Sbjct: 186 TYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGM 245
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 358
+ + YN ++ L ++D A ++ M K D+ TY ++ L +A ++
Sbjct: 246 AQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKV 305
Query: 359 PSASKLL 365
A +L+
Sbjct: 306 HEAQELM 312
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 149/313 (47%), Gaps = 4/313 (1%)
Query: 99 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 158
P T+ ++ LCK + D+AL + G P+ YN ++ GLC+ ++ AR +
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 159 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 218
+++ PN +TY T++ + + + E+ M KGY Y T+I F K
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
L A D ++MV ++V+Y TLI+ K GK++AA +LD M K+G + T
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
++ LIDG CK + A LE M G + YN +++ L + K++ A +F M
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246
Query: 339 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
+ TY++++ LC K+L A +L + G + GL +G
Sbjct: 247 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVH 306
Query: 395 EAKKIQSKIRMAK 407
EA+++ K+++ K
Sbjct: 307 EAQELMEKMKLTK 319
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 111/197 (56%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ A + ++M + P+VVTY +LI G +++ + + ++LD M++ G
Sbjct: 120 LIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKG 179
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V +Y+ L+ ++ + DEA+++ + M+ + P T+NI+LN LC+ ++A
Sbjct: 180 VTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAF 239
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++FRG+ + P +VTYN L++ LC +L A + E+ G P+AITY T+
Sbjct: 240 KLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGL 299
Query: 182 FRNRKYKLGLEILSAMK 198
R K E++ MK
Sbjct: 300 TRAGKVHEAQELMEKMK 316
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+++ C+ + + + M + P VVTYN+L+ + L + L EM+
Sbjct: 224 ILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAK 283
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
G PPD +Y++L L + GK EA + + M
Sbjct: 284 GCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 315
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 197/421 (46%), Gaps = 52/421 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ F+AG ++N M E G P ++L+ G + + + DL++++ + G
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P ++ YN+L++ + + GK DEA +F +M L P T++I+++ CK D AL
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G + Y+ LI G CK G+LR A+ + E+ +G PN + YT+++
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + M KG + + + + +I+ R+ EA +MV V +
Sbjct: 471 CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNE 530
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN LI +CKEG A+ LLDEM ++G D YT+ LI GLC G + AR E+
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR---EF 587
Query: 302 MN------------------------------KIGFD----------------SNLEAYN 315
MN KIG N Y
Sbjct: 588 MNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYA 647
Query: 316 CIVDRLGKDGKIDHAINVFESME---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
C +D L +G I+ AI + + + + ++ TY+ ++ CK R+ A+++L++ + SG
Sbjct: 648 CFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSG 707
Query: 373 V 373
+
Sbjct: 708 I 708
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 178/368 (48%), Gaps = 4/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ + C+ F ++ RM +G V TYN I G +N + ++++ + + G
Sbjct: 221 VVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKG 280
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ DV +Y +L+ L ++ + + + +MI P A + +++GL K +A
Sbjct: 281 LRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAF 340
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++K G P L YN LI +CK G+L A + +G G PN +TY+ ++
Sbjct: 341 DLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSF 400
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + L L M G + Y ++I+ K+G+L+ A ++M+ +G++ ++
Sbjct: 401 CKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNV 460
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V Y +LI+ YCKEG+L A+ L EM +G + YT T LI GLC A + A
Sbjct: 461 VIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGE 520
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M + N YN +++ K+G A + + M V D++TY ++ LC R
Sbjct: 521 MVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGR 580
Query: 358 LPSASKLL 365
+ A + +
Sbjct: 581 VSEAREFM 588
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 189/404 (46%), Gaps = 17/404 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID++C+ D L +M E GI V Y+SLI+G + L + L DEM+
Sbjct: 395 ILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIAN 454
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V Y SL+ + G+ A R++ +M ++P T TF +++GLC A
Sbjct: 455 GLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEA 514
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK- 179
++F + + +P VTYN+LI+G CK G A +L E+ + G P+ TY ++
Sbjct: 515 NKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISG 574
Query: 180 CCFRNR--KYKLGLEILSAMKRKGYTFDG-----FGYCTVIAAFVKIGRLKEATDYMEQM 232
C R + + + L ++K +G Y +I KIG + +A +M
Sbjct: 575 LCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREM 634
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
+ + +Y ++ EG +E A L D + +GF + T+ ILI G CK G I
Sbjct: 635 LASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVL-LEGFLANTVTYNILIRGFCKLGRI 693
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 348
+ A L M G + +Y+ I+ + G + AI ++ESM + D+ Y+ +
Sbjct: 694 QEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFL 753
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 392
++ C L A +L ++ GV+ +A + L H C
Sbjct: 754 IYGCCVTGELTKAFELRDDMMRRGVK----PNRATYNSLIHGTC 793
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 172/403 (42%), Gaps = 39/403 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI Y Q G ++ M + GI P + T + ++ G R +L L DE++
Sbjct: 150 LLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSS 209
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV+ Y + ++ LC+ + A
Sbjct: 210 GLRPDVYVYTA-----------------------------------VVRSLCELKDFIRA 234
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++ G + TYN+ I+GLCK R+ A I L G + TY T++
Sbjct: 235 REVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLG 294
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ +++ G E+++ M G+ ++ K G + A D + ++ GV
Sbjct: 295 LCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPS 354
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ YN LIN CK+GKL+ A L + M +G + T++ILID CK G + A L
Sbjct: 355 LFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLG 414
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M ++G + + Y+ ++ K GK+ A ++F+ M + Y+S++ CK
Sbjct: 415 KMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEG 474
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L +A +L G+ A++ GL H+ EA K+
Sbjct: 475 ELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKL 517
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 144/303 (47%), Gaps = 4/303 (1%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
T F++++ +NR + L + R + G +P++ T + ++ GL + + R A +
Sbjct: 145 TLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFD 204
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
E+ SG P+ YT +++ + + E++ M+ G Y I K
Sbjct: 205 EIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQ 264
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
R+ EA + + G++ D+ +Y TL+ CK + EA +++EM + GF + +
Sbjct: 265 RVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVS 324
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
L+DGL K GNI A + + K G +L YN +++ + KDGK+D A ++F +M K
Sbjct: 325 NLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHK 384
Query: 341 DSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
F TYS ++ + CK +L A L + G++ +++ G G R A
Sbjct: 385 GLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAA 444
Query: 397 KKI 399
K +
Sbjct: 445 KSL 447
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 115/272 (42%), Gaps = 44/272 (16%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM--- 57
+LI+ +C+ + + +L+ M E G+ PD TY LI+G +S + + ++++
Sbjct: 535 VLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGE 594
Query: 58 ------LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTP------C----- 100
+E G P+V +Y +L++ L ++G D+A + ++M+ + P C
Sbjct: 595 QQKLNEIE-GCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYL 653
Query: 101 -----------------------TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
T T+NI++ G CK A + + G P+ +
Sbjct: 654 TSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCI 713
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
+Y+ +I C+ G L+ A + + + + G P+ + Y ++ C + E+ M
Sbjct: 714 SYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDM 773
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
R+G + Y ++I + + DY
Sbjct: 774 MRRGVKPNRATYNSLIHGTCLMSSVSSTADYF 805
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 4/202 (1%)
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
G+ +I +V+ R + + M+ G+ I + + ++N + + A L DE
Sbjct: 146 LGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDE 205
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
+ G D Y +T ++ LC+ + AR + M G D ++ YN + L K+ +
Sbjct: 206 IVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQR 265
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+ A+ + + K D TY ++V LCK + + +++ ++ G ++A
Sbjct: 266 VWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSN 325
Query: 383 VVDGLRHSGCRREAKKIQSKIR 404
+VDGLR G A + +K++
Sbjct: 326 LVDGLRKKGNIGSAFDLVNKVK 347
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 186/370 (50%), Gaps = 6/370 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID + FD + IL ++ + I T++ LIA ++ + +++ +M +
Sbjct: 101 LVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDF 160
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV++YNS++H + Q A V+ M+ + P ATF I+LNGLCKN TD+A
Sbjct: 161 GCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDA 220
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L+MF + + G P + Y I++ GLC+A R +L + SG P++IT ++
Sbjct: 221 LKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDG 280
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + +L +++GY GY ++I + R E ++ +M G++ D
Sbjct: 281 FCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPD 340
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHL 299
+V Y LI +C+ G ++ A +L++M ++G D Y + LI G C G + AR L L
Sbjct: 341 VVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQL 400
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
E F ++ Y ++ + ++G +D A +F ME T+++++ LCKA
Sbjct: 401 EISKNDCFPTSC-TYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKA 459
Query: 356 KRLPSASKLL 365
L A L
Sbjct: 460 GELEEARHLF 469
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 172/339 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI AY + + +M++ G PDV TYNS++ + + +L + ++ML++
Sbjct: 136 VLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKL 195
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+ ++ L++ L + GK D+A ++F +M + P T + I+L+GLC+ + TD+
Sbjct: 196 NYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDV 255
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+ ++ G P+ +T N L+ G CK G++ A +L+ G+ Y++++
Sbjct: 256 HRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDG 315
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
FR ++Y E M + G D Y +I F ++G + A + + M G+ D
Sbjct: 316 LFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPD 375
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
YN LI +C G L+ A L E+ K T+TILI G+C+ G + AR
Sbjct: 376 TYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFN 435
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
M +G ++ +N ++D L K G+++ A ++F ME+
Sbjct: 436 QMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEI 474
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 161/378 (42%), Gaps = 43/378 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID + +D +M +AGI PDVV Y LI G ++ +L++L++M + G
Sbjct: 312 LIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRG 371
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD + YN+L+ +G D+A + ++ D P + T+ I++ G+C+N D A
Sbjct: 372 LSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEAR 431
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW------------------------ 157
++F ++ G P ++T+N LI GLCKAG L AR
Sbjct: 432 QIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRV 491
Query: 158 ------------------ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
+L ++ +G P++ Y +M R K + + R
Sbjct: 492 MDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLR 551
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
+ + F K G L++A + +M +I Y + C+ + E
Sbjct: 552 SLPSQEDETLKLAEEHFEK-GELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEE 610
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A + +++ + + + +LI+GLCK GN++ A Y + GF N ++
Sbjct: 611 ALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLR 670
Query: 320 RLGKDGKIDHAINVFESM 337
L K+ HA+++ M
Sbjct: 671 SLILQDKMKHALDLLNRM 688
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/326 (19%), Positives = 147/326 (45%), Gaps = 4/326 (1%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
D ++ +++ ++ TF++++ K+ + A+ F ++ G P++ TYN +
Sbjct: 113 DTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSI 172
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
+ + + A + ++ + PN T+ ++ +N K L++ M +KG
Sbjct: 173 LHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGI 232
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
+ Y +++ + R + + M G D ++ N L++ +CK G+++ A+
Sbjct: 233 PPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFA 292
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
LL EK+G+ ++ LIDGL +A + M K G + ++ Y ++
Sbjct: 293 LLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFC 352
Query: 323 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
+ G +D+A+N+ M + D++ Y++++ C L A L L K+
Sbjct: 353 EVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSC 412
Query: 379 AQKAVVDGLRHSGCRREAKKIQSKIR 404
++ G+ +G EA++I +++
Sbjct: 413 TYTILICGMCRNGLLDEARQIFNQME 438
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 132/306 (43%), Gaps = 4/306 (1%)
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
T N++++ L K+ D ++ L+ T+++LI K+G A +
Sbjct: 97 VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ D G P+ TY +I+ + + L L + + M + Y + + ++ K G+
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
+A ++M G+ + + Y +++ C+ + + + LL+ M+ G D T
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN----VFESM 337
L+DG CK G I A L+ K G+ ++ Y+ ++D L + + D +F++
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336
Query: 338 EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
D Y+ ++ C+ + A +L + G+ A++ G G +A+
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396
Query: 398 KIQSKI 403
+Q +I
Sbjct: 397 SLQLEI 402
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 134/356 (37%), Gaps = 55/356 (15%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG-------------------- 40
+LI +C+ D +LN M + G+SPD YN+LI G
Sbjct: 346 ILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKN 405
Query: 41 ---------------ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
RN LL + + ++M +G P + ++N+L+ L + G+ +EA
Sbjct: 406 DCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEA 465
Query: 86 NRVFQDMICGD-----LTPCTATFNIM--LNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
+F M G L +M NG + ++A R+ + K+G P
Sbjct: 466 RHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAV 525
Query: 139 YNILIKGLCKAGRLRTA--RWI--LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
Y L+ C+ G+L A W+ L+ L + F + + + L
Sbjct: 526 YKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEH-----FEKGELEKAVRCL 580
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI--VSYNTLINLYC 252
M K F+ Y + + R +EA +V Q+D+ S LIN C
Sbjct: 581 LEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIF--LVLKECQMDVNPPSCVMLINGLC 638
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
K+G LE A + ++GF L+ L +K A L MN G+D
Sbjct: 639 KDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAGYD 694
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 198/407 (48%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C +++RM E G PD++T N+L+ G + + ++ L+D+M+E G
Sbjct: 164 LINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG 223
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y +++ + + G+ A + + M ++ ++I+++GLCK+ DNA
Sbjct: 224 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 283
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ G ++TYNILI G C AGR +L+++ PN +T++ ++
Sbjct: 284 NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + E+ M +G D Y ++I F K L +A ++ MV+ G +I
Sbjct: 344 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 403
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++N LIN YCK +++ L +M +G D T+ LI G C+ G + A+ +
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 463
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M N+ Y ++D L +G+ + A+ +FE +E D Y+ ++H +C A +
Sbjct: 464 MVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 523
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A L S GV+ ++ GL G EA+ + K+
Sbjct: 524 VDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 162/327 (49%), Gaps = 1/327 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C +D G +L M + I+P+VVT++ LI + L + +L EM+
Sbjct: 303 ILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR 362
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD +Y SL+ + D+AN++ M+ P TFNI++NG CK D+
Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 422
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +FR + G V + VTYN LI+G C+ G+L A+ + +E+ PN +TY ++
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
N + + LEI +++ D Y +I ++ +A D + GV+
Sbjct: 483 LCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPG 542
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +YN +I CK+G L A LL +ME+ G D +T+ ILI G+ + +E
Sbjct: 543 VKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIE 602
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKI 327
+ + GF + ++D L DG++
Sbjct: 603 ELKRCGFSVDASTIKMVIDMLS-DGRL 628
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 187/420 (44%), Gaps = 39/420 (9%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P V+ ++ L + + L L +M GI ++++ + +++C + K A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
+I P T TF+ ++NGLC AL + + + G P+L+T N L+ GLC
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
+G+ A ++ ++ + G PNA+TY ++ ++ + L +E+L M+ + D
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC---------------- 252
Y +I K G L A + +M G+ +I++YN LI +C
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 253 -------------------KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
KEGKL A L EM +G D T+T LIDG CK ++
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
A ++ M G D N+ +N +++ K +ID + +F M V D+ TY++++
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
C+ +L A +L + V K ++DGL +G +A +I KI +K+
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 162/338 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ S D + + N M GI+ +++TYN LI G LL +M++
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P+V +++ L+ + GK EA + ++MI + P T T+ +++G CK + D A
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+M + G P + T+NILI G CKA R+ + +++ G + +TY T+++
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K + E+ M + + Y ++ G ++A + E++ ++LD
Sbjct: 448 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I YN +I+ C K++ A+ L + +G + T+ I+I GLCK G + A L
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 567
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
M + G + YN ++ DG ++ + E ++
Sbjct: 568 KMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 605
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 147/312 (47%), Gaps = 6/312 (1%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K D+A +F+DMI P F+ + + + K + D L + + ++ G L T +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKR 199
I+I C+ +L A + ++ G+ PN IT++T++ C R + LE++ M
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSE-ALELVDRMVE 186
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
G+ D T++ G+ EA +++MV G Q + V+Y ++N+ CK G+
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A LL +ME++ + D ++I+IDGLCK G++ A M G +N+ YN ++
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 320 RLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
G+ D + M + + T+S ++ + K +L A +L + G+
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 376 LKSAQKAVVDGL 387
+++DG
Sbjct: 367 DTITYTSLIDGF 378
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 35/230 (15%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ D G + +M G+ D VTYN+LI G L+ + +L EM+
Sbjct: 408 ILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR 467
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQ------------------------------ 90
+PP++ +Y L+ L G+ ++A +F+
Sbjct: 468 KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 527
Query: 91 -DMICG----DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
D+ C + P T+NIM+ GLCK A +FR +++ G P+ TYNILI+
Sbjct: 528 WDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 587
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
G + +++EL G + +A T ++ R K L++LS
Sbjct: 588 HLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDMLS 637
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 191/405 (47%), Gaps = 4/405 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ S A +L M + PDVV Y S+I ++ ++ + +L EM+ G
Sbjct: 170 LINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQG 229
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P +++YNSL+H L L + + +M+ + P F+ +++ LCK A
Sbjct: 230 ISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAH 289
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K G P +VTYN L+ G C + A + + G AP+ ++Y+T++
Sbjct: 290 DVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGY 349
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ + + + M RK + Y T++ +GRL++A +MVT G D
Sbjct: 350 CKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDF 409
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
VSY L++ CK +L+ A LL +E + D +TI+IDG+C+AG ++ AR
Sbjct: 410 VSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSN 469
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
++ G N+ Y +++ L + G + A +F M+ K + TY+ + +
Sbjct: 470 LSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNE 529
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 402
+LL L G S +V+ L G + K+I S+
Sbjct: 530 TLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSE 574
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 198/408 (48%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+++C +++L ++ + G P++ T+N+LI G + L L D+M+
Sbjct: 99 ILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGE 158
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V +Y +L++ L ++G A R+ + M G+ P + +++ LCK+R A
Sbjct: 159 GFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQA 218
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G P + TYN LI LC + +L E+ +S PN + ++T++
Sbjct: 219 FNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDA 278
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K +++ M ++G + Y ++ + EA + MV G D
Sbjct: 279 LCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPD 338
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+VSY+TLIN YCK ++E A L +EM ++ + T++ L+ GLC G ++ A
Sbjct: 339 VVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFH 398
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
M G + +Y ++D L K+ ++D AI + +++E D Y+ ++ +C+A
Sbjct: 399 EMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAG 458
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
L +A L + G+ +++GL G EA K+ +++
Sbjct: 459 ELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMK 506
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 177/368 (48%), Gaps = 4/368 (1%)
Query: 9 FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 68
F + D + NRM P + + L+ T+ S L L +M GIPP++++
Sbjct: 37 FNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYT 96
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
N L++ L + A V ++ P ATFN ++ GLC L +F +
Sbjct: 97 LNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMI 156
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
GF P +VTY LI GLCK G A +L+ + P+ + YT+I+ ++R+
Sbjct: 157 GEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVT 216
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
+ S M +G + F Y ++I A + K T + +MV + ++V ++T++
Sbjct: 217 QAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVV 276
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
+ CKEGK+ A+ ++D M K+G E + T+ L+DG C + A + M GF
Sbjct: 277 DALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFA 336
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKL 364
++ +Y+ +++ K +I+ A+ +FE M + ++ TYS+++H LC RL A L
Sbjct: 337 PDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIAL 396
Query: 365 LLSCLKSG 372
+ G
Sbjct: 397 FHEMVTRG 404
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 153/378 (40%), Gaps = 41/378 (10%)
Query: 60 MGIPPDVWS--YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
+ +PP S +N+ D+A F M+ P A F +L + K ++
Sbjct: 16 LSLPPHFLSSSHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHY 75
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
L + + G P + T NILI C RL A +L ++ GH PN T+ T+
Sbjct: 76 STVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTL 135
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
++ K L + M +G+ + Y T+I K+G A + M
Sbjct: 136 IRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNC 195
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI-------------- 283
Q D+V Y ++I+ CK+ ++ A+ L EM QG +T+ LI
Sbjct: 196 QPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTA 255
Query: 284 ---------------------DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
D LCK G + A ++ M K G + N+ YN ++D
Sbjct: 256 LLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHC 315
Query: 323 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
++D A+ VF++M K D +YS++++ CK +R+ A L + +
Sbjct: 316 LRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTV 375
Query: 379 AQKAVVDGLRHSGCRREA 396
++ GL H G ++A
Sbjct: 376 TYSTLMHGLCHVGRLQDA 393
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 80/162 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ D +L + + + PD+ Y +I G R L + DL +
Sbjct: 414 ILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSK 473
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+VW+Y +++ L Q G EA+++F +M +P T+N++ G +N T
Sbjct: 474 GLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRG 533
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
+++ + + GF ++ T +L++ L G ++ + IL E
Sbjct: 534 IQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEF 575
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 197/406 (48%), Gaps = 16/406 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMRE-AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++D C+ + +L +M E + I P+VV Y+++I ++ S + +L EM E
Sbjct: 225 IVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD+++YNS++ G+ +A ++ Q+M+ ++P T+N ++N K A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G +P +TY+ +I G CK RL A + + G +PN IT+ T++
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ G+E+L M G D Y T+I F +G L A D +++M++ G+ D
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPD 464
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEK-----------QGFECDKYTHTILIDGLCKA 289
IV+ +TL++ C GKL+ A + M+K G E D T+ ILI GL
Sbjct: 465 IVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE 524
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 345
G A E M G + Y+ ++D L K ++D A +F+SM K + T+
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 584
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+++++ CKA R+ +L + G+ ++ G R G
Sbjct: 585 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG 630
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 192/400 (48%), Gaps = 5/400 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D ++ +M I D+ ++ LI S L +L ++ ++G+ PDV ++N+L
Sbjct: 96 DLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTL 155
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+H L + EA +F M P TF ++NGLC+ A+ + + + G
Sbjct: 156 LHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL 215
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGL 191
P +TY ++ G+CK G +A +L+++ + H PN + Y+ I+ ++ ++
Sbjct: 216 QPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQ 275
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+ + M+ KG D F Y ++I F GR +A +++M+ + D+V+YN LIN +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
KEGK A L DEM +G + T++ +IDG CK + A M G NL
Sbjct: 336 VKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNL 395
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
+N ++D +ID + + M V D+ TY++++H L +A LL
Sbjct: 396 ITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
+ SG+ ++DGL +G ++A ++ ++ +K
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 194/454 (42%), Gaps = 88/454 (19%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C + ++ + G+ PDVVT+N+L+ G +S +L+L +M E
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFET 178
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK------- 113
P+V ++ +LM+ L + G+ EA + M+ L P T+ +++G+CK
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSA 238
Query: 114 ------------------------------NRYTDNALRMFRGLQKHGFVPELVTYNILI 143
R++D A +F +Q+ G P+L TYN +I
Sbjct: 239 LDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSD-AQNLFTEMQEKGIFPDLFTYNSMI 297
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G C +GR A +L+E+ + +P+ +TY ++ + K+ E+ M +G
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
+ Y ++I F K RL A M T G +++++NTLI+ YC +++ L
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Query: 264 LDEMEKQGFECDKYTHTILI-----------------------------------DGLCK 288
L EM + G D T+ LI DGLC
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477
Query: 289 AGNIKGARLHLEYMNKI-----------GFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
G +K A + M K G + +++ YN ++ L +GK A ++E M
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 338 E----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
V D+ TYSSM+ LCK RL A+++ S
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS 571
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 144/279 (51%), Gaps = 13/279 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC D G +L+ M E G+ D TYN+LI G L+ +LDLL EM+ G
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-----------ICGDLTPCTATFNIMLNG 110
+ PD+ + ++L+ L GK +A +F+ M + P T+NI+++G
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520
Query: 111 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
L A ++ + G VP+ +TY+ +I GLCK RL A + +G +PN
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
+T+TT++ + + GLE+ M R+G + Y T+I F K+G + A D +
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640
Query: 231 QMVTDGVQLDIVSY-NTLINLYCKEGKLEAAYLLLDEME 268
+M++ GV D ++ N L L+ KE +L+ A +L++++
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKE-ELKRAVAMLEKLQ 678
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 154/313 (49%), Gaps = 11/313 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID +C+ DA + M G SP+++T+N+LI G + ++LL EM E G
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D +YN+L+H + +G + A + Q+MI L P T + +L+GLC N +AL
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485
Query: 122 RMFRGLQK-----------HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
MF+ +QK +G P++ TYNILI GL G+ A + +E+ G P+
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
ITY++++ + + ++ +M K ++ + + T+I + K GR+ + +
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+M G+ + ++Y TLI + K G + A + EM G D T ++ GL
Sbjct: 606 EMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 665
Query: 291 NIKGARLHLEYMN 303
+K A LE +
Sbjct: 666 ELKRAVAMLEKLQ 678
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 152/321 (47%), Gaps = 5/321 (1%)
Query: 50 SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 109
++DL +ML P V + LM + ++ +PD ++Q M + +F I++
Sbjct: 63 AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIK 122
Query: 110 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 169
C AL F + K G P++VT+N L+ GLC R+ A + ++ ++ P
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRP 182
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
N +T+TT+M R + + +L M G Y T++ KIG A D +
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLL 242
Query: 230 EQM-VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+M + ++V Y+ +I+ CK+G+ A L EM+++G D +T+ +I G C
Sbjct: 243 RKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 344
+G A L+ M + ++ YN +++ K+GK A +++ M + ++ T
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362
Query: 345 YSSMVHNLCKAKRLPSASKLL 365
YSSM+ CK RL +A +
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMF 383
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 144/326 (44%), Gaps = 40/326 (12%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
++A +F DM+ P F ++ + + D + +++ +++ ++ ++ IL
Sbjct: 61 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 120
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
IK C +L A ++ G P+ +T+ T++
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLH----------------------- 157
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
G C R+ EA + QM + ++V++ TL+N C+EG++ A
Sbjct: 158 -----GLCVE-------DRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVA 205
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG-FDSNLEAYNCIVDRL 321
LLD M + G + + T+ ++DG+CK G+ A L M +I N+ Y+ I+D L
Sbjct: 206 LLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSL 265
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
KDG+ A N+F M+ K D FTY+SM+ C + R A +LL L+ +
Sbjct: 266 CKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDV 325
Query: 378 SAQKAVVDGLRHSGCRREAKKIQSKI 403
A+++ G EA+++ ++
Sbjct: 326 VTYNALINAFVKEGKFFEAEELYDEM 351
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 93/201 (46%), Gaps = 6/201 (2%)
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ F +I L++A D M+ +V + L+ + + + + L +ME++
Sbjct: 52 SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
CD Y+ TILI C + A + K+G ++ +N ++ L + ++ A+N+
Sbjct: 112 CDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNL 171
Query: 334 FESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
F M + T++++++ LC+ R+ A LL ++ G++ + +VDG+
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231
Query: 390 SGCRREAKKIQSKIRMAKISH 410
G A + K M +ISH
Sbjct: 232 IGDTVSALDLLRK--MEEISH 250
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 197/400 (49%), Gaps = 4/400 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +CQ D G+++L + + G+ P +VT+ +LI G + + +++L D+M+
Sbjct: 15 ILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVAR 74
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD ++Y ++++ L ++G+ A +F+ M T++ +++ LCK R + A
Sbjct: 75 GCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEA 134
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F ++ P + TY LI+GLC R + A +L E+ PN +T+ ++
Sbjct: 135 LDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDT 194
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K +L M G D Y +++ + + EA + M+T G + D
Sbjct: 195 FCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPD 254
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ SY+ LIN YCK +++ A L +EM QG + ++ LI GLC+ G ++ A+ +
Sbjct: 255 VFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFK 314
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
M+ G NL Y ++D K G + A +F +M+ + Y+ +V+ +CK+
Sbjct: 315 NMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSG 374
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
L A +L G++ +++GL G EA
Sbjct: 375 NLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEA 414
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 153/309 (49%), Gaps = 4/309 (1%)
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ + N L++C QL + D V I L P TF ++NGL K A
Sbjct: 5 GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +F + G P+ TY +I GLCK G A + K++ ++G N +TY+T++
Sbjct: 65 VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ R+ L+I S MK K + F Y ++I R KEA+ + +M + + +
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPN 184
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V++N L++ +CKEGK+ AA +L M + G E D T+ L+ G + AR +
Sbjct: 185 VVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFD 244
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
M G ++ +Y+ +++ K +ID A +F M ++ +Y++++H LC+
Sbjct: 245 VMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLG 304
Query: 357 RLPSASKLL 365
RL A L
Sbjct: 305 RLREAQDLF 313
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 138/278 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D +C+ A +L M E G+ PDVVTYNSL+ G + + + + L D M+
Sbjct: 190 VLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITK 249
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV+SY+ L++ + + DEA ++F +MI TP ++N +++GLC+ A
Sbjct: 250 GCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREA 309
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ + +G +P L TY IL+ G CK G L A + + + + PN + Y ++
Sbjct: 310 QDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNA 369
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K E+ S + G + Y T+I K G L EA + M DG D
Sbjct: 370 MCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPD 429
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
SYN +I + + A L+ EM +GF D T
Sbjct: 430 EFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 191/405 (47%), Gaps = 4/405 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ S A +L M + PDVV Y S+I ++ ++ + +L EM+ G
Sbjct: 179 LINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQG 238
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P +++YNSL+H L L + + +M+ + P F+ +++ LCK A
Sbjct: 239 ISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAH 298
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K G P +VTYN L+ G C + A + + G AP+ ++Y+T++
Sbjct: 299 DVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGY 358
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ + + + M RK + Y T++ +GRL++A +MVT G D
Sbjct: 359 CKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDF 418
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
VSY L++ CK +L+ A LL +E + D +TI+IDG+C+AG ++ AR
Sbjct: 419 VSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSN 478
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
++ G N+ Y +++ L + G + A +F M+ K + TY+ + +
Sbjct: 479 LSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNE 538
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 402
+LL L G S +V+ L G + K+I S+
Sbjct: 539 TLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSE 583
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 198/408 (48%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+++C +++L ++ + G P++ T+N+LI G + L L D+M+
Sbjct: 108 ILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGE 167
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V +Y +L++ L ++G A R+ + M G+ P + +++ LCK+R A
Sbjct: 168 GFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQA 227
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G P + TYN LI LC + +L E+ +S PN + ++T++
Sbjct: 228 FNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDA 287
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K +++ M ++G + Y ++ + EA + MV G D
Sbjct: 288 LCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPD 347
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+VSY+TLIN YCK ++E A L +EM ++ + T++ L+ GLC G ++ A
Sbjct: 348 VVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFH 407
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G + +Y ++D L K+ ++D AI + +++E D Y+ ++ +C+A
Sbjct: 408 EMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAG 467
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
L +A L + G+ +++GL G EA K+ +++
Sbjct: 468 ELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMK 515
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 177/368 (48%), Gaps = 4/368 (1%)
Query: 9 FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 68
F + D + NRM P + + L+ T+ S L L +M GIPP++++
Sbjct: 46 FNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYT 105
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
N L++ L + A V ++ P ATFN ++ GLC L +F +
Sbjct: 106 LNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMI 165
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
GF P +VTY LI GLCK G A +L+ + P+ + YT+I+ ++R+
Sbjct: 166 GEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVT 225
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
+ S M +G + F Y ++I A + K T + +MV + ++V ++T++
Sbjct: 226 QAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVV 285
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
+ CKEGK+ A+ ++D M K+G E + T+ L+DG C + A + M GF
Sbjct: 286 DALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFA 345
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKL 364
++ +Y+ +++ K +I+ A+ +FE M + ++ TYS+++H LC RL A L
Sbjct: 346 PDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIAL 405
Query: 365 LLSCLKSG 372
+ G
Sbjct: 406 FHEMVTRG 413
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 153/378 (40%), Gaps = 41/378 (10%)
Query: 60 MGIPPDVWS--YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
+ +PP S +N+ D+A F M+ P A F +L + K ++
Sbjct: 25 LSLPPHFLSSSHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHY 84
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
L + + G P + T NILI C RL A +L ++ GH PN T+ T+
Sbjct: 85 STVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTL 144
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
++ K L + M +G+ + Y T+I K+G A + M
Sbjct: 145 IRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNC 204
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI-------------- 283
Q D+V Y ++I+ CK+ ++ A+ L EM QG +T+ LI
Sbjct: 205 QPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTA 264
Query: 284 ---------------------DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
D LCK G + A ++ M K G + N+ YN ++D
Sbjct: 265 LLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHC 324
Query: 323 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
++D A+ VF++M K D +YS++++ CK +R+ A L + +
Sbjct: 325 LRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTV 384
Query: 379 AQKAVVDGLRHSGCRREA 396
++ GL H G ++A
Sbjct: 385 TYSTLMHGLCHVGRLQDA 402
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 80/162 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ D +L + + + PD+ Y +I G R L + DL +
Sbjct: 423 ILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSK 482
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+VW+Y +++ L Q G EA+++F +M +P T+N++ G +N T
Sbjct: 483 GLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRG 542
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
+++ + + GF ++ T +L++ L G ++ + IL E
Sbjct: 543 IQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEF 584
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 185/365 (50%), Gaps = 6/365 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANR 87
P+ VTYN++IAG + +LD++ EM E G I P+ ++Y +++ ++G+ DEA +
Sbjct: 143 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 202
Query: 88 VFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
VF +M+ G++ P +N ++ G C D AL + + G + TYN+L+ L
Sbjct: 203 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 262
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
GR A +++E+G G AP+ TY ++ + K LEI M R+G
Sbjct: 263 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 322
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I A K G+++E ++ V G++ D+V YN LIN + G ++ A+ ++ E
Sbjct: 323 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 382
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
MEK+ D T+ L+ GLC G + AR ++ M + G +L YN ++ G
Sbjct: 383 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGD 442
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+ A+ + M K TY++++ LCK + A ++ +++G+ S +
Sbjct: 443 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 502
Query: 383 VVDGL 387
+++GL
Sbjct: 503 LIEGL 507
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 156/321 (48%), Gaps = 1/321 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+I +C+ D + + M G + P+ V YN+LI G L +L D M+E
Sbjct: 187 VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVER 246
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ V +YN L+H LF G+ EA + ++M L P T+NI++NG CK A
Sbjct: 247 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 306
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F + + G +VTY LI L K G+++ + E G P+ + Y ++
Sbjct: 307 LEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 366
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ EI+ M++K D Y T++ +GR+ EA +++M G+Q D
Sbjct: 367 HSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPD 426
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YNTLI+ Y +G ++ A + +EM +GF T+ LI GLCK G A ++
Sbjct: 427 LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK 486
Query: 301 YMNKIGFDSNLEAYNCIVDRL 321
M + G + Y +++ L
Sbjct: 487 EMVENGITPDDSTYISLIEGL 507
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 174/359 (48%), Gaps = 8/359 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMRE-AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+I +C A I+ MRE GI+P+ TY ++I+G + + ++ + DEML
Sbjct: 151 VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTK 210
Query: 61 G-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G + P+ YN+L+ GK D A M+ + AT+N++++ L +
Sbjct: 211 GEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE 270
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + + G P++ TYNILI G CK G ++ A I + + G +TYT ++
Sbjct: 271 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIY 330
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + + ++ R+G D Y +I + G + A + M +M +
Sbjct: 331 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 390
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLH 298
D V+YNTL+ C G+++ A L+DEM ++G + D T+ LI G G++K A R+
Sbjct: 391 DDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIR 450
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 353
E MNK GF+ L YN ++ L K+G+ D A N+ + M D TY S++ L
Sbjct: 451 NEMMNK-GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 508
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 178/397 (44%), Gaps = 49/397 (12%)
Query: 48 SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 107
+ SL L M + +P S + L+ L A +F DM L CT TFNIM
Sbjct: 65 ATSLRLYSRMKSLSLPISTASLHPLLSAL----PSAPAFALFADMFRLRLPLCTTTFNIM 120
Query: 108 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 167
L LC AL + R + + P VTYN +I G C GR++ A I++E+ + G
Sbjct: 121 LRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGG 176
Query: 168 -APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT-FDGFGYCTVIAAFVKIGRLKEA 225
APN TY T++ + + +++ M KG + Y +I + G+L A
Sbjct: 177 IAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTA 236
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
Y ++MV GV + + +YN L++ +G+ AY L++EM +G D +T+ ILI+G
Sbjct: 237 LLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILING 296
Query: 286 LCKAGNIKGARLHLEYMNKIG---------------------------FD--------SN 310
CK GN+K A E M++ G FD +
Sbjct: 297 HCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPD 356
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
L YN +++ G ID A + ME K D TY++++ LC R+ A KL+
Sbjct: 357 LVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID 416
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ G++ ++ G G ++A +I++++
Sbjct: 417 EMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 453
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 164/330 (49%), Gaps = 16/330 (4%)
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
R++ M L TA+ + +L+ L + A +F + + T+NI+++ L
Sbjct: 69 RLYSRMKSLSLPISTASLHPLLSALP----SAPAFALFADMFRLRLPLCTTTFNIMLRHL 124
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMK-RKGYTF 204
C AG+ A +L+++ PNA+TY T++ C R R + L+I+ M+ R G
Sbjct: 125 CSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGR-VQAALDIMREMRERGGIAP 179
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG-VQLDIVSYNTLINLYCKEGKLEAAYLL 263
+ + Y TVI+ + K+GR+ EA ++M+T G V+ + V YN LI YC +GKL+ A L
Sbjct: 180 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 239
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
D M ++G T+ +L+ L G A +E M G ++ YN +++ K
Sbjct: 240 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCK 299
Query: 324 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
+G + A+ +FE+M + TY+++++ L K ++ KL ++ G+R
Sbjct: 300 EGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 359
Query: 380 QKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
A+++ SG A +I ++ +I+
Sbjct: 360 YNALINSHSTSGNIDRAFEIMGEMEKKRIA 389
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ + I M G+ VVTY +LI ++ + + L DE +
Sbjct: 292 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 351
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD+ YN+L++ G D A + +M + P T+N ++ GLC D A
Sbjct: 352 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 411
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + + G P+LVTYN LI G G ++ A I E+ + G P +TY +++
Sbjct: 412 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 471
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
+N + ++ M G T D Y ++I
Sbjct: 472 LCKNGQGDDAENMVKEMVENGITPDDSTYISLI 504
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 186/374 (49%), Gaps = 11/374 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ D +L+ M E G P+V+TY+ L+ G + LL EM G
Sbjct: 142 VINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG 201
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV YN+L++ L + + DEA + Q MI P T+N ++ C+++ D A
Sbjct: 202 FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAF 261
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + + + G P+++ YN +I GLC+ RL A+ +LK++ + P+ ITY+TI+
Sbjct: 262 RLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGL 321
Query: 182 FR------NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
+ + K + EIL MK+ G + Y VI + + ++A + +M+
Sbjct: 322 CKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDS 381
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
V D+ S++ +I CK L+AAY + M ++ + + + LIDGL K G + A
Sbjct: 382 EVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKA 441
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHN 351
E M + F + YN ++D L G+I+ A+ + E M K+ F +Y +++
Sbjct: 442 VRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRG 500
Query: 352 LCKAKRLPSASKLL 365
LC+ + A +L
Sbjct: 501 LCRVSCVEEAYELF 514
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 195/401 (48%), Gaps = 11/401 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ D Y +L+ MR+ GI P V +N +I G + +L +
Sbjct: 36 LIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTK 95
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PD+ ++N L+ L + G+ +EA ++F+ M P T+ ++NGLCK+ D A
Sbjct: 96 CTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRA 155
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + + G P ++TY++L++GLCKAGR +L+E+ G P+ I Y T++
Sbjct: 156 IELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNG 215
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++R+ LE++ M R G Y +++ F + ++ A ++ M G D
Sbjct: 216 LCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPD 275
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI------KG 294
+++YNT+I C++ +L+ A LL +M D T++ +IDGLCK + +
Sbjct: 276 VINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEA 335
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVH 350
A LE M + G N Y +++ L + K A+ + M V D ++S ++
Sbjct: 336 ACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIG 395
Query: 351 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+LCK+ L +A K+ + + A A++DGL G
Sbjct: 396 SLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGG 436
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 187/362 (51%), Gaps = 11/362 (3%)
Query: 23 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 82
RE P+ TY SLI G + L + +LLDEM + GIPP V +N ++ L + G+
Sbjct: 22 REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRF 81
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG-FVPELVTYNI 141
+A F+ + TP TFNI+++ L K+ + A ++F + +P +VTY
Sbjct: 82 GDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTT 141
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
+I GLCK G+L A +L + ++G PN ITY+ +++ + + G +L M R+G
Sbjct: 142 VINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG 201
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ D Y T++ K RL EA + ++ M+ G +V+YN+L+ L+C+ +++ A+
Sbjct: 202 FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAF 261
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
L+ M ++G D + +I GLC+ + A+ L+ M ++ Y+ I+D L
Sbjct: 262 RLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGL 321
Query: 322 GKDGKID------HAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
KD ++D A + E M+ ++ TY+ ++ LC+A++ A LL + S
Sbjct: 322 CKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDS 381
Query: 372 GV 373
V
Sbjct: 382 EV 383
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 185/384 (48%), Gaps = 11/384 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ C+ D G+T+L M G PDV+ YN+L+ G ++ L +L+L+ M+
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS 235
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P V +YNSLM + + D A R+ Q M P +N ++ GLC++ D+A
Sbjct: 236 GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDA 295
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGR------LRTARWILKELGDSGHAPNAITY 174
+ + + VP+++TY+ +I GLCK R L A IL+ + +G PNA TY
Sbjct: 296 QALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTY 355
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
+++ R RK + L +L M D + VI + K L A M
Sbjct: 356 AVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSE 415
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
+ + V+Y LI+ K G+++ A + E+ + F T+ ++DGLC G I+
Sbjct: 416 RECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEE 474
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 350
A +E M + +Y ++ L + ++ A +F+++E K + Y+ +V+
Sbjct: 475 AVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVN 534
Query: 351 NLCKAKRLPSASKLLLSCLKSGVR 374
LCK KRL A + +++G +
Sbjct: 535 ELCKKKRLSDAHGVANKLIEAGYK 558
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 1/206 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ +L RM ++ + PD+ +++ +I ++ L + + M E
Sbjct: 357 VVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSER 416
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+ +Y +L+ L + G+ D+A RVF+ M+ P AT+N +L+GLC + A
Sbjct: 417 ECKPNPVAYAALIDGLSKGGEVDKAVRVFELMV-ESFRPGVATYNSVLDGLCGVGRIEEA 475
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+RM G+ P+ +Y LI+GLC+ + A + + + G A Y ++
Sbjct: 476 VRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNE 535
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDG 206
+ ++ + + + GY G
Sbjct: 536 LCKKKRLSDAHGVANKLIEAGYKQQG 561
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 315 NCIVDRLGKDGKIDHAINVF-ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
NC ++ L + G+ A+ +F E V + FTY S++H LCKA +L A +LL G+
Sbjct: 2 NCALNLLVRAGQHGQAVQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGI 61
Query: 374 RILKSAQKAVVDGLRHSG 391
+ V+ GL +G
Sbjct: 62 PPGVAVHNGVIRGLCKAG 79
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 187/377 (49%), Gaps = 4/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I C+ + + +L +RE G SP+VV Y +LI G + + + DL EM +
Sbjct: 168 IVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKF 227
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + W+Y L+H LF+ G + +++ M + P T+N ++N LCK+ T +A
Sbjct: 228 GLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDA 287
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F +++ G +VTYN LI GLC+ + A ++ ++ G PN ITY T++
Sbjct: 288 FKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDG 347
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
RK L + +K +G + Y +++ F K G A +++M G++
Sbjct: 348 FCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPS 407
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+Y LI+ + + +E A L ME+ G D +T+++LI G C G + A +
Sbjct: 408 KVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFK 467
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAK 356
M + F+ N YN +V K+G A+ +F ME K+ +Y M+ LCK +
Sbjct: 468 SMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKER 527
Query: 357 RLPSASKLLLSCLKSGV 373
+ A L+ + SG+
Sbjct: 528 KSKEAEGLVEKMIDSGI 544
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 162/316 (51%), Gaps = 4/316 (1%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
G+ + +M+E G+ P++ TYN ++ ++ + + DEM E G+ ++ +YN+L+
Sbjct: 252 GFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIG 311
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
L + K +EAN V M + P T+N +++G C R AL + R L+ G P
Sbjct: 312 GLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSP 371
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
LVTYNIL+ G CK G A ++KE+ + G P+ +TYT ++ R+ + +++
Sbjct: 372 SLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
S+M+ G T D Y +I F GR+ EA+ + MV + + V YNT++ YCKE
Sbjct: 432 SSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKE 491
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
G A L EME++ + ++ +I+ LCK K A +E M DS +
Sbjct: 492 GSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKM----IDSGIGPS 547
Query: 315 NCIVDRLGKDGKIDHA 330
+ I++ + + H+
Sbjct: 548 DSILNLISRAKNDSHS 563
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 181/374 (48%), Gaps = 5/374 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+AY Q S D+ N M + G P +N+L+ +S + +E ++
Sbjct: 99 VIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNES-KI 157
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ DV+S+ ++ + G+ +++ + ++ +P + +++G CK + A
Sbjct: 158 KVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + K G V TY +LI GL K G + + +++ + G PN TY +M
Sbjct: 218 KDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQ 277
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ + K ++ M+ +G + + Y T+I + + EA + M+QM +DG+ +
Sbjct: 278 LCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPN 337
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++YNTLI+ +C KL A L +++ +G T+ IL+ G CK G+ GA ++
Sbjct: 338 LITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVK 397
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + G + Y ++D + ++ AI + SME D TYS ++H C
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKG 457
Query: 357 RLPSASKLLLSCLK 370
R+ AS+L S ++
Sbjct: 458 RMNEASRLFKSMVE 471
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 160/340 (47%), Gaps = 5/340 (1%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
Y +++ Q D + F +M+ P + FN +L + + + N F
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSS-SFNQWWCFFNES 155
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
K V ++ ++ I+IKG C+AG + + +L EL + G +PN + YTT++ C + + +
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
++ M + G + + Y +I K G K+ + E+M GV ++ +YN ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVM 275
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
N CK+G+ + A+ + DEM ++G C+ T+ LI GLC+ A ++ M G +
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGIN 335
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
NL YN ++D K+ A+++ ++ + TY+ +V CK A K+
Sbjct: 336 PNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ + G++ K ++D S +A +++S +
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSME 435
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 91/170 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ M E GI P VTY LI R+ + ++ L M E+
Sbjct: 378 ILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEEL 437
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV +Y+ L+H G+ +EA+R+F+ M+ P +N M+ G CK + A
Sbjct: 438 GLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRA 497
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
LR+FR +++ P + +Y +I+ LCK + + A +++++ DSG P+
Sbjct: 498 LRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPS 547
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 68/142 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID + + + + + + M E G++PDV TY+ LI G ++ + L M+E
Sbjct: 413 ILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEK 472
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+ YN+++ + G A R+F++M +L P A++ M+ LCK R + A
Sbjct: 473 KFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEA 532
Query: 121 LRMFRGLQKHGFVPELVTYNIL 142
+ + G P N++
Sbjct: 533 EGLVEKMIDSGIGPSDSILNLI 554
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 196/406 (48%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ +L+ M +G+ P++V Y +L+ G + + + D+L EM+ G
Sbjct: 319 LMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAG 378
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ Y++L+ L ++G+ A+++ ++MI L P T T+N ++ G + D A
Sbjct: 379 VQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAF 438
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++ G +P + +Y I+I GLC+ G + A +L+E+ G PNA Y ++
Sbjct: 439 ELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGH 498
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ L E L M + D F Y ++I +GR++EA +Y Q+ G+ D
Sbjct: 499 SKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDE 558
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y+ LI+ YCK G LE A LL +M G + + T+T L++G K+ + + L+
Sbjct: 559 FTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQS 618
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G + Y ++ L + ++ A V +E V D YSS++ LCK
Sbjct: 619 MLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIAD 678
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ A LL K G+ A++DG SG A+ + I
Sbjct: 679 MEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSI 724
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 174/373 (46%), Gaps = 31/373 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
I+A+C+ FDA + MR + + VTYN +I+G R+ + + +EM++ G
Sbjct: 249 FIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYG 308
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD ++Y +LM+ L + + EA + +M C L P + +++G K T A
Sbjct: 309 LSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAF 368
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P + Y+ LI+GLCK G+L A +LKE+ G P+ TY +M+
Sbjct: 369 DILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGH 428
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ E+L+ M+ G + + Y +I + G KEA + +E+M+++G++ +
Sbjct: 429 FQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNA 488
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
Y LI + KEG + A L++M K D + + LI GL G ++ A +
Sbjct: 489 FMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQ 548
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSA 361
+ K G V D FTYS ++H CK L A
Sbjct: 549 VQKRGL-------------------------------VPDEFTYSGLIHGYCKTGNLEKA 577
Query: 362 SKLLLSCLKSGVR 374
+LL L SG++
Sbjct: 578 DQLLRQMLNSGLK 590
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 189/397 (47%), Gaps = 9/397 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ + Q D + +LN MR +GI P+V +Y +I G +N + +LL+EM+ G
Sbjct: 424 LMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEG 483
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ + Y L+ + G A + M ++ P +N ++ GL + A
Sbjct: 484 LKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAE 543
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ +QK G VP+ TY+ LI G CK G L A +L+++ +SG PNA TYT +++
Sbjct: 544 EYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGY 603
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F++ Y+ IL +M G D Y VI + ++ A + ++ +G+ D+
Sbjct: 604 FKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDL 663
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
Y++LI+ CK +E A LLDEM K+G E + LIDG C++G+I AR +
Sbjct: 664 HIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDS 723
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G N Y ++D K+G I A ++++ M D+F Y+ + A
Sbjct: 724 ILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAAD 783
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
L A L G A ++ + L H C+R
Sbjct: 784 LEQALFLTEEMFNRGY-----ANVSLFNTLVHGFCKR 815
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 147/353 (41%), Gaps = 19/353 (5%)
Query: 27 ISPDVVTYNSLIAGATRNSL-LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
+SPD V+ SLI G +SL LD PP ++ L L +A
Sbjct: 77 LSPDAVS--SLIFGGRSHSLHPKLLLDFFYWSRPRIAPPSADAFARLAASLCAASLFPQA 134
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
N + MI P +I R + R P ++L+
Sbjct: 135 NGLLHQMILAHPHPPLVLASI-------QRAIQDTDHRSRSPS-----PSTAVLDVLVDT 182
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
K G +R A ++ + D G AP ++K R +L ++ M+ G D
Sbjct: 183 YKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAGILPD 242
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ Y T I A K A E+M ++ V+YN +I+ C+ G +E A+ +
Sbjct: 243 VYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKE 302
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM G D +T+ L++GLCK +K A+ L+ M+ G N+ Y +VD K+G
Sbjct: 303 EMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEG 362
Query: 326 KIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
K A ++ + M + Y +++ LCK +L ASKLL +K G+R
Sbjct: 363 KTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLR 415
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 193/408 (47%), Gaps = 25/408 (6%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
++ MR G+ PD VTYN+L+ G + L L LL EM+ G+ P+V +Y +L++C+
Sbjct: 299 LVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMC 358
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G A +F M L P T+ +++G C+ + A ++ + GF P +V
Sbjct: 359 KAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVV 418
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN L+ G C GR++ A IL+ + + G P+ ++Y+T++ R R+ ++ M
Sbjct: 419 TYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEM 478
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
KG D Y ++I +L EA D +M+ G+ D V+Y +LIN YC +G+L
Sbjct: 479 VEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGEL 538
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR---LHLEYMNKIGFDSNLEAY 314
A L DEM ++GF D T+++LI+GL K K A+ L L Y + D Y
Sbjct: 539 SKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDV---TY 595
Query: 315 NCIVDRLGKD---------------GKIDHAINVFESM----EVKDSFTYSSMVHNLCKA 355
N +++ + G ++ A VF++M ++ Y+ M+H +
Sbjct: 596 NTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRG 655
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ A L + S A A+V L G E ++ I
Sbjct: 656 GNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNI 703
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 187/396 (47%), Gaps = 4/396 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
+D + M G+SP+V TYN +I G L L + +M + GI P+V +YN+
Sbjct: 188 YDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNT 247
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
L+ + K EA + + M G + ++N ++NGLC + ++ G
Sbjct: 248 LIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKG 307
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP+ VTYN L+ G CK G L +L E+ G +PN +TYTT++ C + +
Sbjct: 308 LVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAV 367
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
EI M+ +G + Y T+I F + G + EA + +M+ G +V+YN L++ Y
Sbjct: 368 EIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGY 427
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
C G+++ A +L M ++G D +++ +I G C+ + A E M + G +
Sbjct: 428 CFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDT 487
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLS 367
Y+ ++ L K+ A ++F M + D TY+S+++ C L A +L
Sbjct: 488 VTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDE 547
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++ G +++GL + AK++ K+
Sbjct: 548 MVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKL 583
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 184/370 (49%), Gaps = 9/370 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LIDA C+ +L M G++ ++++YNS+I G +S +L++EM G
Sbjct: 248 LIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKG 307
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +YN+L++ + G + + +M+ L+P T+ ++N +CK A+
Sbjct: 308 LVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAV 367
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC- 180
+F ++ G P TY LI G C+ G + A +L E+ SG +P+ +TY ++
Sbjct: 368 EIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGY 427
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
CF R + + IL M +G D Y TVIA F + L +A E+MV GV D
Sbjct: 428 CFLGRVQE-AVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPD 486
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHL 299
V+Y++LI C + KL A+ L EM ++G D+ T+T LI+ C G + K RLH
Sbjct: 487 TVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHD 546
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHNLCKA 355
E + + GF + Y+ +++ L K + A + +F V D TY++++ N C
Sbjct: 547 EMVQR-GFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIEN-CSN 604
Query: 356 KRLPSASKLL 365
S L+
Sbjct: 605 NEFKSVEGLV 614
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 181/367 (49%), Gaps = 11/367 (2%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD------EMLEMGIPPDVWSYN 70
T+L+ G +P V++YN+++ R S S D D +M+ G+ P+V++YN
Sbjct: 153 TLLHLANRHGFAPTVLSYNAVLDALLRRS-SSNHRDYDDAERVFRDMVRNGVSPNVYTYN 211
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
++ + G ++ + M ++P T+N +++ CK + A+ + R +
Sbjct: 212 VIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVG 271
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G L++YN +I GLC GR+ +++E+ G P+ +TY T++ + G
Sbjct: 272 GVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQG 331
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
L +LS M KG + + Y T+I K G L A + +QM G++ + +Y TLI+
Sbjct: 332 LVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDG 391
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+C++G + AY +L EM GF T+ L+ G C G ++ A L M + G +
Sbjct: 392 FCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPD 451
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
+ +Y+ ++ ++ ++ A + E M K D+ TYSS++ LC ++L A L
Sbjct: 452 VVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFR 511
Query: 367 SCLKSGV 373
++ G+
Sbjct: 512 EMMRRGL 518
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 177/369 (47%), Gaps = 15/369 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ +C+ + G +L+ M G+SP+VVTY +LI + LS ++++ D+M G
Sbjct: 318 LVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRG 377
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +Y +L+ Q G +EA +V +MI +P T+N +++G C A+
Sbjct: 378 LRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAV 437
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ RG+ + G P++V+Y+ +I G C+ L A + +E+ + G P+ +TY+++++
Sbjct: 438 GILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGL 497
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+K ++ M R+G D Y ++I A+ G L +A ++MV G D
Sbjct: 498 CLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDN 557
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID---------------GL 286
V+Y+ LIN K+ + + A LL ++ + D T+ LI+ G
Sbjct: 558 VTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGF 617
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYS 346
C G + A + M + N YN ++ + G + A N++ +E ++
Sbjct: 618 CMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHT 677
Query: 347 SMVHNLCKA 355
V L KA
Sbjct: 678 VAVIALVKA 686
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 156/361 (43%), Gaps = 50/361 (13%)
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV--------------- 137
+C +A F++++ L + + AL + +HGF P ++
Sbjct: 124 LCSSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSS 183
Query: 138 -------------------------TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
TYN++I+G+ G L ++++ G +PN +
Sbjct: 184 NHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVV 243
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
TY T++ + +K K + +L AM G + Y +VI GR+ E + +E+M
Sbjct: 244 TYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEM 303
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
G+ D V+YNTL+N +CKEG L +LL EM +G + T+T LI+ +CKAGN+
Sbjct: 304 RGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNL 363
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSM 348
A + M G N Y ++D + G ++ A V M V TY+++
Sbjct: 364 SRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNAL 423
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR-RE-AKKIQSKIRMA 406
VH C R+ A +L ++ G+ + V+ G CR RE K Q K M
Sbjct: 424 VHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGF----CRERELGKAFQMKEEMV 479
Query: 407 K 407
+
Sbjct: 480 E 480
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 124/294 (42%), Gaps = 15/294 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C+ + + M E G+ PD VTY+SLI G L + DL EM+ G
Sbjct: 458 VIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRG 517
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+PPD +Y SL++ G+ +A R+ +M+ P T+++++NGL K T A
Sbjct: 518 LPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAK 577
Query: 122 RMFRGLQKHGFVPELVTYNILI---------------KGLCKAGRLRTARWILKELGDSG 166
R+ L VP+ VTYN LI KG C G + A + K +
Sbjct: 578 RLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRN 637
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
H PNA Y ++ R + ++ + ++ A + G E +
Sbjct: 638 HKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELS 697
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
++ ++ D L+ + KEG ++A +L EM K G D H+
Sbjct: 698 RLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPDGGIHS 751
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 186/374 (49%), Gaps = 11/374 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ D +L+ M E G P+V+TY+ L+ G + LL EM G
Sbjct: 142 VINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG 201
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV YN+L++ L + + DEA + Q MI P T+N ++ C+++ D A
Sbjct: 202 FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAF 261
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + + + G P+++ YN +I GLC+ RL A+ +LK++ + P+ ITY+TI+
Sbjct: 262 RLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGL 321
Query: 182 FR------NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
+ + K + EIL MK+ G + Y VI + + ++A + +M+
Sbjct: 322 CKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDS 381
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
V D+ S++ +I CK L+AAY + M ++ + + + LIDGL K G + A
Sbjct: 382 EVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKA 441
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHN 351
E M + F + YN ++D L G+I+ A+ + E M K+ F +Y +++
Sbjct: 442 VRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRG 500
Query: 352 LCKAKRLPSASKLL 365
LC+ + A +L
Sbjct: 501 LCRVSCVEEAYELF 514
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 195/401 (48%), Gaps = 11/401 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ D Y +L+ MR+ GI P V +N +I G + +L +
Sbjct: 36 LIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTK 95
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PD+ ++N L+ L + G+ +EA ++F+ M P T+ ++NGLCK+ D A
Sbjct: 96 CTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRA 155
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + + G P ++TY++L++GLCKAGR +L+E+ G P+ I Y T++
Sbjct: 156 IELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNG 215
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++R+ LE++ M R G Y +++ F + ++ A ++ M G D
Sbjct: 216 LCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPD 275
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI------KG 294
+++YNT+I C++ +L+ A LL +M D T++ +IDGLCK + +
Sbjct: 276 VINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEA 335
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVH 350
A LE M + G N Y +++ L + K A+ + M V D ++S ++
Sbjct: 336 ACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIG 395
Query: 351 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+LCK+ L +A K+ + + A A++DGL G
Sbjct: 396 SLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGG 436
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 187/362 (51%), Gaps = 11/362 (3%)
Query: 23 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 82
RE P+ TY SLI G + L + +LLDEM + GIPP V +N ++ L + G+
Sbjct: 22 REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRF 81
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG-FVPELVTYNI 141
+A F+ + TP TFNI+++ L K+ + A ++F + +P +VTY
Sbjct: 82 GDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTT 141
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
+I GLCK G+L A +L + ++G PN ITY+ +++ + + G +L M R+G
Sbjct: 142 VINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG 201
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ D Y T++ K RL EA + ++ M+ G +V+YN+L+ L+C+ +++ A+
Sbjct: 202 FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAF 261
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
L+ M ++G D + +I GLC+ + A+ L+ M ++ Y+ I+D L
Sbjct: 262 RLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGL 321
Query: 322 GKDGKID------HAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
KD ++D A + E M+ ++ TY+ ++ LC+A++ A LL + S
Sbjct: 322 CKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDS 381
Query: 372 GV 373
V
Sbjct: 382 EV 383
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 185/384 (48%), Gaps = 11/384 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ C+ D G+T+L M G PDV+ YN+L+ G ++ L +L+L+ M+
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS 235
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P V +YNSLM + + D A R+ Q M P +N ++ GLC++ D+A
Sbjct: 236 GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDA 295
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGR------LRTARWILKELGDSGHAPNAITY 174
+ + + VP+++TY+ +I GLCK R L A IL+ + +G PNA TY
Sbjct: 296 QALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTY 355
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
+++ R RK + L +L M D + VI + K L A M
Sbjct: 356 AVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSE 415
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
+ + V+Y LI+ K G+++ A + E+ + F T+ ++DGLC G I+
Sbjct: 416 RECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEE 474
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 350
A +E M + +Y ++ L + ++ A +F+++E K + Y+ +V+
Sbjct: 475 AVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVN 534
Query: 351 NLCKAKRLPSASKLLLSCLKSGVR 374
LCK KRL A + +++G +
Sbjct: 535 ELCKKKRLSDAHGVANKLIEAGYK 558
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 1/206 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ +L RM ++ + PD+ +++ +I ++ L + + M E
Sbjct: 357 VVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSER 416
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+ +Y +L+ L + G+ D+A RVF+ M+ P AT+N +L+GLC + A
Sbjct: 417 ECKPNPVAYAALIDGLSKGGEVDKAVRVFELMV-ESFRPGVATYNSVLDGLCGVGRIEEA 475
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+RM G+ P+ +Y LI+GLC+ + A + + + G A Y ++
Sbjct: 476 VRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNE 535
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDG 206
+ ++ + + + GY G
Sbjct: 536 LCKKKRLSDAHGVANKLIEAGYKQQG 561
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 315 NCIVDRLGKDGKIDHAINVF-ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
NC ++ L + G+ A+ +F E V + FTY S++H LCKA +L A +LL G+
Sbjct: 2 NCALNLLVRAGQHGQAVQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGI 61
Query: 374 RILKSAQKAVVDGLRHSG 391
+ V+ GL +G
Sbjct: 62 PPGVAVHNGVIKGLCKAG 79
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 192/371 (51%), Gaps = 4/371 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M+++ C+ A + +M E P+VV+Y+ +I +N L++ ++DL M +
Sbjct: 214 MIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSI 273
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P V +YNSL++ + G+ +A+ +F++M+ ++ P TF+I+++ LCK A
Sbjct: 274 GISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEA 333
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F + + P++VTY+ LI G+CK+ + + +L E+ P+ +T++ +
Sbjct: 334 LSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDV 393
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ I++ M +G + Y +++ + ++ EA + MV G D
Sbjct: 394 FCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPD 453
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++SYN LI YCK +++ A L DEM +G + THT LI GLC+AG A+ +
Sbjct: 454 VLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFK 513
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDSFTYSS-MVHNLCKAK 356
M G +L Y+ ++ K G +D A+ +FE++ ++K + ++ +CKA
Sbjct: 514 KMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAG 573
Query: 357 RLPSASKLLLS 367
+L A +L S
Sbjct: 574 KLEDAKELFSS 584
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 195/370 (52%), Gaps = 5/370 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C G+++L ++ + G P ++T+N+LI G + +++ LD ++
Sbjct: 144 ILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSR 203
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P V+++ +++ L ++GK A + M+ D P +++I+++ LCKNR + A
Sbjct: 204 GYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEA 263
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +F ++ G P +VTYN LI G+C +G+ + A + KE+ + P+ +T++ ++
Sbjct: 264 VDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDA 323
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ L + M + D Y ++I K KE++ + +M++ ++ D
Sbjct: 324 LCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPD 383
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+++ ++++CK+G + A +++ M ++G + T+ L+DG C + AR +
Sbjct: 384 VVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFD 443
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G ++ +YN ++ K +ID A +F+ M K +S T+++++ LC+A
Sbjct: 444 IMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAG 503
Query: 357 RLPSASKLLL 366
R P A+K L
Sbjct: 504 R-PYAAKELF 512
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 166/341 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID+ C+ + + MR GISP VVTYNSLI G + + L EMLE
Sbjct: 249 IIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEW 308
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PDV +++ L+ L + G EA VF MI + P T++ +++G+CK+ +
Sbjct: 309 NMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKES 368
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + P++VT++I + CK G + A+ I+ + + G PN +TY ++M
Sbjct: 369 STLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDG 428
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + ++ M KG D Y +I + K R+ EA ++M G+ +
Sbjct: 429 YCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPN 488
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++ TLI+ C+ G+ AA L +M G D T++ L+ G CK G++ A E
Sbjct: 489 SITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFE 548
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 341
+ K N ++ + K GK++ A +F S+ +++
Sbjct: 549 ALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEE 589
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 140/276 (50%), Gaps = 2/276 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+DA C+ ++ +M + + PD+VTY+SLI G ++SL S LL+EML
Sbjct: 319 ILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSR 378
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PDV +++ + + G EA + MI L P T+N +++G C + D A
Sbjct: 379 NIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEA 438
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK- 179
++F + G P++++YNILIKG CK+ R+ A+ + E+ G PN+IT+TT++
Sbjct: 439 RKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISG 498
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
C R Y E+ M G D Y T+++ F K G L EA E + ++
Sbjct: 499 LCQAGRPYA-AKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKP 557
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
+ V L+ CK GKLE A L + + + D
Sbjct: 558 NHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPD 593
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 187/406 (46%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + +D+ +I +M G+S V T LI L+ +L ++ ++G
Sbjct: 110 LLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLG 169
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + ++N+L++ L G+ EA ++ P T +++NGLCK T A+
Sbjct: 170 FKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAI 229
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + PE+V+Y+I+I LCK + A + + G +P +TY +++
Sbjct: 230 VWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGM 289
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++K + M D + ++ A K G + EA +M+ ++ DI
Sbjct: 290 CNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDI 349
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y++LI+ CK + + LL+EM + D T +I +D CK G + A+ +
Sbjct: 350 VTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINL 409
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M + G N+ YN ++D ++D A VF+ M K D +Y+ ++ CK++R
Sbjct: 410 MIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSER 469
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ A +L G+ ++ GL +G AK++ K+
Sbjct: 470 IDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKM 515
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 148/322 (45%), Gaps = 6/322 (1%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
D+A F M+ + PC FN +L L + ++ D+ + ++R ++ G + T IL
Sbjct: 86 DDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTIL 145
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKG 201
I LC + +L ++ G P+ IT+ T++ C R + +E L + +G
Sbjct: 146 INCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVE-AMEQLDYIMSRG 204
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
Y + + ++ KIG+ A +M++MV + ++VSY+ +I+ CK + A
Sbjct: 205 YQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAV 264
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
L M G T+ LI G+C +G K A + + M + ++ ++ +VD L
Sbjct: 265 DLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDAL 324
Query: 322 GKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
K+G + A++VF M D TYSS++H +CK+ +S LL L +R
Sbjct: 325 CKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDV 384
Query: 378 SAQKAVVDGLRHSGCRREAKKI 399
VD G EA+ I
Sbjct: 385 VTFSIWVDVFCKKGMVSEAQSI 406
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 67/136 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI YC+ D + + M G++P+ +T+ +LI+G + + +L +M
Sbjct: 459 ILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSH 518
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PPD+ +Y++L+ + G DEA +F+ + L P I+L G+CK ++A
Sbjct: 519 GCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDA 578
Query: 121 LRMFRGLQKHGFVPEL 136
+F L P++
Sbjct: 579 KELFSSLSIEELQPDV 594
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 187/399 (46%), Gaps = 5/399 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C+ F Y +L+ M + GI P YN++I G N + +L +M +
Sbjct: 39 LINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRH 97
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y L+ L + + +A+ + +DMI P T+N ++NG CK D A+
Sbjct: 98 CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAV 157
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + ++ P++ TYNILI G CK R + +L+E+ G PN ITY T+M
Sbjct: 158 VLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSL 217
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ KY + M R+ F + +I F K+G+L A + + M G DI
Sbjct: 218 VKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDI 277
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN +I+ C+ +++ A LL+ M + G D T+ ++ GLCKA + A E
Sbjct: 278 YTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEV 337
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G+ ++ + ++D L K ++D A + ME D Y+ ++H CKA +
Sbjct: 338 LRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQ 397
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
L + L G V+D L S R+
Sbjct: 398 LDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDG 436
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 181/349 (51%), Gaps = 5/349 (1%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
SPD +TY++LI G + + LLDEM + GI P YN+++ L G+ D A
Sbjct: 30 SPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALV 89
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
++DM P T+ I+++ LCK+ +A + + + G P +VTYN LI G C
Sbjct: 90 HYRDMQ-RHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFC 148
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K G + A + ++ ++ +P+ TY ++ + + + G ++L M + G +
Sbjct: 149 KLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFI 208
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y T++ + VK G+ +A + + M+ + ++N +I+++CK G+L+ AY L M
Sbjct: 209 TYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLM 268
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
+G D YT+ I+I G C+A I AR LE M + G ++ YN IV L K ++
Sbjct: 269 TDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQV 328
Query: 328 DHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
D A V+E + D T S+++ LCK++RL A KLL ++G
Sbjct: 329 DEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNG 377
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 160/305 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C+ + D + N+M E SPDV TYN LI G + LL EM++ G
Sbjct: 143 LINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYG 202
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +YN+LM L + GK +A + Q M+ D P TFN+M++ CK D A
Sbjct: 203 CEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAY 262
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ + G +P++ TYNI+I G C+A R+ AR +L+ + ++G P+ +TY +I+
Sbjct: 263 ELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGL 322
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + E+ ++ GY D T+I K RL +A + +M +G D+
Sbjct: 323 CKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDV 382
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y LI+ +CK +L+ + EM +G T++I+ID LCK+ ++ + L+
Sbjct: 383 VAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKT 442
Query: 302 MNKIG 306
M + G
Sbjct: 443 MLERG 447
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 167/339 (49%), Gaps = 5/339 (1%)
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N L+ + K EA +F++ +CG +P + T++ ++NG CK R A R+ ++K
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G VP YN +IKGLC GR+ +A +++ AP+ ITYT ++ ++ +
Sbjct: 62 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARISD 120
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
IL M G + Y T+I F K+G + EA QM+ + D+ +YN LI+
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
YCK+ + + LL EM K G E + T+ L+D L K+G A + M +
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP 240
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
+ +N ++D K G++D A +F+ M + D +TY+ M+ C+A R+ A +LL
Sbjct: 241 SHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLL 300
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++G ++V GL + EA ++ +R
Sbjct: 301 ERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLR 339
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 35/272 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS--------------- 45
+LID YC+ G +L M + G P+ +TYN+L+ ++
Sbjct: 177 ILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRR 236
Query: 46 --------------------LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
L + +L M + G PD+++YN ++ + + D+A
Sbjct: 237 DCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDA 296
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
++ + M P T+N +++GLCK D A ++ L+ G+ ++VT + LI G
Sbjct: 297 RQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDG 356
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCK+ RL A +L+E+ +G AP+ + YT ++ + + L S M KG
Sbjct: 357 LCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPT 416
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
Y VI K R+++ ++ M+ GV
Sbjct: 417 VITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 189/410 (46%), Gaps = 37/410 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+DA C+ + +L+ MR G PD+VTYN LI + +L++L ++
Sbjct: 202 ILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSH 261
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD +Y ++ L + E +F +M P TFN ++ LC+ D A
Sbjct: 262 GCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRA 321
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + +HG +P++VTY+ ++ GLC GR+ A +L L G P+ I YTT++K
Sbjct: 322 IKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKG 381
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+++ E+++ M D + TVIA+ + G + A +EQM +G D
Sbjct: 382 LCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPD 441
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR---- 296
IV+YN++I+ C E ++ A LL ++ G + D T L+ GLC + A
Sbjct: 442 IVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMV 501
Query: 297 --LH-----------------------------LEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+H L+ M + G N YN +VD L K G
Sbjct: 502 NMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAG 561
Query: 326 KIDHAINVFESME--VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
K A+ + M D TY++++ N+ KA ++ A LL + +G+
Sbjct: 562 KTQEALKLLSGMTNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGL 611
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 178/376 (47%), Gaps = 6/376 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D C D +L+R++ G PD + Y +++ G + +L+ EM+
Sbjct: 343 ILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSD 402
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PPD ++N+++ L Q G D A +V + M P T+N +++GLC R D+A+
Sbjct: 403 CPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAM 462
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ LQ +G P++VT+N L+KGLC R A ++ + S P+A T+ T++
Sbjct: 463 ELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSL 522
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +E L M G + Y V+ A +K G+ +EA + M T+G D+
Sbjct: 523 CQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGM-TNGTP-DL 580
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YNT+I+ K GK+E A LL M G D T+ L G+C+ A L
Sbjct: 581 ITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCR 640
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ +G + YN I+ ++ + D AI+ F M + D TY ++ L
Sbjct: 641 LQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECL 700
Query: 358 LPSASKLLLSCLKSGV 373
L A +LL++ GV
Sbjct: 701 LDEAKQLLVNLCSLGV 716
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 190/406 (46%), Gaps = 8/406 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI A C + + M G SP VVTY+ L+ + S ++ LLDEM G
Sbjct: 168 LIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKG 227
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ +YN L++ + G DEA + D+ P T+ +L LC +
Sbjct: 228 CEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVE 287
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + + P+ VT+N ++ LC+ G + A ++ + + G P+ +TY++I+
Sbjct: 288 ELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGL 347
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +E+LS +K G D Y TV+ I + + A + M +MV D
Sbjct: 348 CDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDE 407
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++NT+I C++G ++ A ++++M + G D T+ +IDGLC I A L
Sbjct: 408 VTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSN 467
Query: 302 MNKIGFDSNLEAYN------CIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA 355
+ G ++ +N C VDR ++ +N+ S D+ T+++++ +LC+
Sbjct: 468 LQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQL--MVNMMHSDCPPDATTFNTVITSLCQK 525
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
L A + L ++G +S VVD L +G +EA K+ S
Sbjct: 526 GLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLS 571
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 169/344 (49%), Gaps = 7/344 (2%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G S VVTYN+++ G R + + L+ M PPD +++N L+ L G+ +A
Sbjct: 125 GASATVVTYNTMVNGYCRAGRIEDARRLIS---GMPFPPDTFTFNPLIRALCVRGRVPDA 181
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
VF DM+ +P T++I+L+ CK A+ + ++ G P++VTYN+LI
Sbjct: 182 LAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINA 241
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
+C G + A IL +L G P+A+TYT ++K + ++K E+ + M D
Sbjct: 242 MCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPD 301
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ T++ + + G + A ++ M G DIV+Y+++++ C G+++ A LL
Sbjct: 302 EVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLS 361
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
++ G + D +T ++ GLC + A + M + +N ++ L + G
Sbjct: 362 RLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKG 421
Query: 326 KIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 365
+D AI V E M D TY+S++ LC + + A +LL
Sbjct: 422 LVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELL 465
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 181/394 (45%), Gaps = 7/394 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ YC+ + +++ M PD T+N LI + +L + D+ML G
Sbjct: 136 MVNGYCRAGRIEDARRLISGM---PFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRG 192
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y+ L+ + +A + +M P T+N+++N +C D AL
Sbjct: 193 CSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEAL 252
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L HG P+ VTY ++K LC + R + + E+ + AP+ +T+ TI+
Sbjct: 253 NILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSL 312
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++++ M G D Y +++ +GR+ +A + + ++ + G + D
Sbjct: 313 CQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDT 372
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y T++ C + E A L+ EM D+ T +I LC+ G + A +E
Sbjct: 373 IAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQ 432
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M++ G + ++ YN I+D L + ID A+ + +++ D T+++++ LC R
Sbjct: 433 MSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDR 492
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
A +L+++ + S + V+ L G
Sbjct: 493 WEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKG 526
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 163/349 (46%), Gaps = 7/349 (2%)
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+G V +YN++++ + G+ ++A R+ M P T TFN ++ LC +
Sbjct: 124 LGASATVVTYNTMVNGYCRAGRIEDARRLISGM---PFPPDTFTFNPLIRALCVRGRVPD 180
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
AL +F + G P +VTY+IL+ CKA R A +L E+ G P+ +TY ++
Sbjct: 181 ALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLIN 240
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
L ILS + G D Y V+ + R KE + +M ++
Sbjct: 241 AMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAP 300
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D V++NT++ C++G ++ A ++D M + G D T++ ++DGLC G + A L
Sbjct: 301 DEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELL 360
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKA 355
+ G + AY ++ L + +HA + M D T+++++ +LC+
Sbjct: 361 SRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQK 420
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A K++ ++G +++DGL + C +A ++ S ++
Sbjct: 421 GLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQ 469
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 135/296 (45%), Gaps = 16/296 (5%)
Query: 97 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 156
+ PC NI++ LC +A R+F L G +VTYN ++ G C+AGR+ AR
Sbjct: 98 VVPC----NILIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDAR 150
Query: 157 WILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 215
++ + P+ T+ +++ C R R L + M +G + Y ++ A
Sbjct: 151 RLISGM---PFPPDTFTFNPLIRALCVRGRVPD-ALAVFDDMLHRGCSPSVVTYSILLDA 206
Query: 216 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
K ++A +++M G + DIV+YN LIN C EG ++ A +L ++ G + D
Sbjct: 207 TCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPD 266
Query: 276 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
T+T ++ LC + K M + +N IV L + G +D AI V +
Sbjct: 267 AVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVD 326
Query: 336 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
M + D TYSS++ LC R+ A +LL G + A V+ GL
Sbjct: 327 HMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGL 382
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 86/202 (42%), Gaps = 42/202 (20%)
Query: 206 GFGYC---TVIAAFVKIGRL---KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
G G C V+ + I RL D T G +V+YNT++N YC+ G++E
Sbjct: 89 GSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATLGASATVVTYNTMVNGYCRAGRIED 148
Query: 260 AYLLL--------------------------------DEMEKQGFECDKYTHTILIDGLC 287
A L+ D+M +G T++IL+D C
Sbjct: 149 ARRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATC 208
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSF 343
KA + A + L+ M G + ++ YN +++ + +G +D A+N+ + D+
Sbjct: 209 KASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAV 268
Query: 344 TYSSMVHNLCKAKRLPSASKLL 365
TY+ ++ +LC ++R +L
Sbjct: 269 TYTPVLKSLCGSERWKEVEELF 290
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 196/411 (47%), Gaps = 44/411 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C+ G +++RM G +P+ +TY L+ G + +C +D +L
Sbjct: 286 VIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCK----TCRIDEAQALLSKV 341
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANR-VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+V +N+L++ + G+ +EA V+ MI P TF+ ++NGLCK +A
Sbjct: 342 PGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSA 401
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + G P L TY ILI G CK G+L A IL+E+ G + N + Y ++
Sbjct: 402 LELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISA 461
Query: 181 CFRNRKYKLGLEILSAMKRKG-----YTFDG--FGYC----------------------- 210
++ K L++ M KG +TF+ FG C
Sbjct: 462 LCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIAN 521
Query: 211 -----TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
T+I AF++ G ++EA + M+ G LD ++YN LI CK G +E L +
Sbjct: 522 SVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFE 581
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM ++G T ILI+G C AG + A + M GF ++ YN +++ L K G
Sbjct: 582 EMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRG 641
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
+I A+N+FE ++ + DS TY++++ LC+ A LL +++G
Sbjct: 642 RIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENG 692
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 177/346 (51%), Gaps = 4/346 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
+A + ++M G PDV T+++L+ G + L +L+L+++M G P++ +Y L
Sbjct: 364 EATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTIL 423
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ + G+ +EA + ++M+ + T +N +++ LCK+ AL MF + G
Sbjct: 424 IDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGC 483
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P++ T+N LI GLC+ + A + +++ G N++T+ T++ R + + L+
Sbjct: 484 KPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALK 543
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+++ M +G D Y +I A K G +++ E+M+ G+ I++ N LIN +C
Sbjct: 544 LVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFC 603
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
GK+ A + +M +GF D T+ LI+GLCK G I+ A E + G +
Sbjct: 604 TAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSI 663
Query: 313 AYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCK 354
YN ++ L ++G D A + E+ V + T++ +V+N K
Sbjct: 664 TYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGK 709
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 189/384 (49%), Gaps = 15/384 (3%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
P +YN ++ + S + ++ +ML G+ P+ +++ +M L + + D A
Sbjct: 172 EPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACL 231
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
+ +DM P + + +++ L K D AL++ + G P++ T+N +I G C
Sbjct: 232 LLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFC 291
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
+ R+ ++ + G PN +TY +M + + +LS +
Sbjct: 292 RLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVH--- 348
Query: 208 GYCTVIAAFVKIGRLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ T++ FV+ GRL EAT ++ ++M+ +G D+ +++TL+N CK+G +A L+++
Sbjct: 349 -FNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVND 407
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+ +G + + T+TILIDG CK G ++ A L L M GF N YN ++ L K GK
Sbjct: 408 MDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGK 467
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
I A+++F M K D FT++S++ LC+ + A L + GV A
Sbjct: 468 IHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGV----IANSV 523
Query: 383 VVDGLRHSGCRREAKKIQSKIRMA 406
+ L H+ RR +IQ +++
Sbjct: 524 TFNTLIHAFLRR--GEIQEALKLV 545
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 157/322 (48%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ F + ++N M G P++ TY LI G + L + +L EML G
Sbjct: 388 LVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKG 447
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ YN+L+ L + GK EA +F +M P TFN ++ GLC+ ++AL
Sbjct: 448 FSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDAL 507
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++R + G + VT+N LI + G ++ A ++ ++ G + ITY ++K
Sbjct: 508 ALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKAL 567
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + GL + M RKG T +I F G++ A ++M M+ G DI
Sbjct: 568 CKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDI 627
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN+LIN CK G+++ A L ++++ +G + D T+ LI LC+ G A L
Sbjct: 628 VTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYR 687
Query: 302 MNKIGFDSNLEAYNCIVDRLGK 323
+ GF N +N +V GK
Sbjct: 688 GVENGFVPNDVTWNILVYNFGK 709
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 151/297 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID +C+ + IL M G S + V YN+LI+ ++ + +LD+ EM
Sbjct: 422 ILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSK 481
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD++++NSL+ L ++ + ++A +++DM+ + + TFN +++ + A
Sbjct: 482 GCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEA 541
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L++ + G + +TYN LIK LCK G + + +E+ G P+ IT ++
Sbjct: 542 LKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILING 601
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K LE + M +G++ D Y ++I K GR++EA + E++ +G+Q D
Sbjct: 602 FCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPD 661
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
++YNTLI C+EG + A LL + GF + T IL+ K N +G +
Sbjct: 662 SITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSEGQTI 718
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 191/397 (48%), Gaps = 15/397 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C V+ + Y +L++ G+SP+ T+ ++ + + + LL +M +
Sbjct: 184 VLVVGNCPSVASNVFYDMLSK----GVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKH 239
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK-NRYTDN 119
G P+ Y +L+ L + + DEA ++ ++M P TFN ++ G C+ NR +
Sbjct: 240 GCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEG 299
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + R + K GF P +TY L+ GLCK R+ A+ +L ++ PN + + T++
Sbjct: 300 AKLVDRMILK-GFTPNDMTYGYLMHGLCKTCRIDEAQALLSKV----PGPNVVHFNTLVN 354
Query: 180 CCFRN-RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
RN R + + M GY D F + T++ K G A + + M G +
Sbjct: 355 GFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCK 414
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
++ +Y LI+ +CK+G+LE A L+L EM +GF + + LI LCK G I A
Sbjct: 415 PNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDM 474
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCK 354
M+ G ++ +N ++ L + +++ A+ ++ M + +S T+++++H +
Sbjct: 475 FGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLR 534
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ A KL+ L G + + ++ L +G
Sbjct: 535 RGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTG 571
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 196/406 (48%), Gaps = 16/406 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++D C+ + +L +M E I P+VV Y+++I ++ S + +L EM E
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD+++YNS++ G+ +A ++ Q+M+ ++P T+N ++N K A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G +P +TY+ +I G CK RL A + + G +PN IT+ T++
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ G+E+L M G D Y T+I F +G L A D +++M++ G+ D
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPD 464
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEK-----------QGFECDKYTHTILIDGLCKA 289
IV+ +TL++ C GKL+ A + M+K G E D T+ ILI GL
Sbjct: 465 IVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE 524
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 345
G A E M G + Y+ ++D L K ++D A +F+SM K + T+
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 584
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+++++ CKA R+ +L + G+ ++ G R G
Sbjct: 585 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG 630
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 192/400 (48%), Gaps = 5/400 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D ++ +M I D+ ++ LI S L +L ++ ++G+ PDV ++N+L
Sbjct: 96 DLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTL 155
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+H L + EA +F M P TF ++NGLC+ A+ + + + G
Sbjct: 156 LHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL 215
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGL 191
P +TY ++ G+CK G +A +L+++ + H PN + Y+ I+ ++ ++
Sbjct: 216 QPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQ 275
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+ + M+ KG D F Y ++I F GR +A +++M+ + D+V+YN LIN +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
KEGK A L DEM +G + T++ +IDG CK + A M G NL
Sbjct: 336 VKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNL 395
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
+N ++D +ID + + M V D+ TY++++H L +A LL
Sbjct: 396 ITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
+ SG+ ++DGL +G ++A ++ ++ +K
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 193/453 (42%), Gaps = 86/453 (18%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C + ++ + G+ PDVVT+N+L+ G +S +L+L +M E
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFET 178
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+V ++ +LM+ L + G+ EA + M+ L P T+ +++G+CK T +A
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238
Query: 121 LRMFRG------------------------------------LQKHGFVPELVTYNILIK 144
L + R +Q+ G P+L TYN +I
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
G C +GR A +L+E+ + +P+ +TY ++ + K+ E+ M +G
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ Y ++I F K RL A M T G +++++NTLI+ YC +++ LL
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 265 DEMEKQGFECDKYTHTILI-----------------------------------DGLCKA 289
EM + G D T+ LI DGLC
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN 478
Query: 290 GNIKGARLHLEYMNKI-----------GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
G +K A + M K G + +++ YN ++ L +GK A ++E M
Sbjct: 479 GKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMP 538
Query: 339 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
V D+ TYSSM+ LCK RL A+++ S
Sbjct: 539 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS 571
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 144/279 (51%), Gaps = 13/279 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC D G +L+ M E G+ D TYN+LI G L+ +LDLL EM+ G
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-----------ICGDLTPCTATFNIMLNG 110
+ PD+ + ++L+ L GK +A +F+ M + P T+NI+++G
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520
Query: 111 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
L A ++ + G VP+ +TY+ +I GLCK RL A + +G +PN
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
+T+TT++ + + GLE+ M R+G + Y T+I F K+G + A D +
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640
Query: 231 QMVTDGVQLDIVSY-NTLINLYCKEGKLEAAYLLLDEME 268
+M++ GV D ++ N L L+ KE +L+ A +L++++
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKE-ELKRAVAMLEKLQ 678
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 154/313 (49%), Gaps = 11/313 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID +C+ DA + M G SP+++T+N+LI G + ++LL EM E G
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D +YN+L+H + +G + A + Q+MI L P T + +L+GLC N +AL
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485
Query: 122 RMFRGLQK-----------HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
MF+ +QK +G P++ TYNILI GL G+ A + +E+ G P+
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
ITY++++ + + ++ +M K ++ + + T+I + K GR+ + +
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+M G+ + ++Y TLI + K G + A + EM G D T ++ GL
Sbjct: 606 EMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 665
Query: 291 NIKGARLHLEYMN 303
+K A LE +
Sbjct: 666 ELKRAVAMLEKLQ 678
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 144/326 (44%), Gaps = 40/326 (12%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
++A +F DM+ P F ++ + + D + +++ +++ ++ ++ IL
Sbjct: 61 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 120
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
IK C +L A +L G P+ +T+ T++
Sbjct: 121 IKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLH----------------------- 157
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
G C R+ EA + QM + ++V++ TL+N C+EG++ A
Sbjct: 158 -----GLCVE-------DRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVA 205
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG-FDSNLEAYNCIVDRL 321
LLD M + G + + T+ ++DG+CK G+ A L M ++ N+ Y+ I+D L
Sbjct: 206 LLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSL 265
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
KDG+ A N+F M+ K D FTY+SM+ C + R A +LL L+ +
Sbjct: 266 CKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDV 325
Query: 378 SAQKAVVDGLRHSGCRREAKKIQSKI 403
A+++ G EA+++ ++
Sbjct: 326 VTYNALINAFVKEGKFFEAEELYDEM 351
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 5/246 (2%)
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
P+ + + +M R + L + + M+RK D + + +I F +L A
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
++ G+ D+V++NTL++ C E ++ A L +M + + T T L++GLC+
Sbjct: 137 FGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-----VKDSF 343
G I A L+ M + G Y IVD + K G A+N+ ME + +
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
YS+++ +LCK R A L + G+ +++ G SG +A+++ ++
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 404 RMAKIS 409
KIS
Sbjct: 317 LERKIS 322
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 94/201 (46%), Gaps = 6/201 (2%)
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ F +I L++A D M+ +V + L+ + + + + L +ME++
Sbjct: 52 SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
CD Y+ TILI C + A + K+G ++ +N ++ L + ++ A+N+
Sbjct: 112 CDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNL 171
Query: 334 FESM-EV---KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
F M E + T++++++ LC+ R+ A LL ++ G++ + +VDG+
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231
Query: 390 SGCRREAKKIQSKIRMAKISH 410
G A + K M ++SH
Sbjct: 232 KGDTVSALNLLRK--MEEVSH 250
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 196/406 (48%), Gaps = 16/406 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++D C+ + +L +M E I P+VV Y+++I ++ S + +L EM E
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD+++YNS++ G+ +A ++ Q+M+ ++P T+N ++N K A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G +P +TY+ +I G CK RL A + + G +PN IT+ T++
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ G+E+L M G D Y T+I F +G L A D +++M++ G+ D
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPD 464
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEK-----------QGFECDKYTHTILIDGLCKA 289
IV+ +TL++ C GKL+ A + M+K G E D T+ ILI GL
Sbjct: 465 IVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE 524
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 345
G A E M G + Y+ ++D L K ++D A +F+SM K + T+
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 584
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+++++ CKA R+ +L + G+ ++ G R G
Sbjct: 585 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG 630
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 192/400 (48%), Gaps = 5/400 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D ++ +M I D+ ++ LI S L +L ++ ++G+ PDV ++N+L
Sbjct: 96 DLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTL 155
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+H L + EA +F M P TF ++NGLC+ A+ + + + G
Sbjct: 156 LHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL 215
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGL 191
P +TY ++ G+CK G +A +L+++ + H PN + Y+ I+ ++ ++
Sbjct: 216 QPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQ 275
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+ + M+ KG D F Y ++I F GR +A +++M+ + D+V+YN LIN +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
KEGK A L DEM +G + T++ +IDG CK + A M G NL
Sbjct: 336 VKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNL 395
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
+N ++D +ID + + M V D+ TY++++H L +A LL
Sbjct: 396 ITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
+ SG+ ++DGL +G ++A ++ ++ +K
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 193/453 (42%), Gaps = 86/453 (18%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C + ++ + G+ PDVVT+N+L+ G +S +L+L +M E
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFET 178
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+V ++ +LM+ L + G+ EA + M+ L P T+ +++G+CK T +A
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238
Query: 121 LRMFRG------------------------------------LQKHGFVPELVTYNILIK 144
L + R +Q+ G P+L TYN +I
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
G C +GR A +L+E+ + +P+ +TY ++ + K+ E+ M +G
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ Y ++I F K RL A M T G +++++NTLI+ YC +++ LL
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 265 DEMEKQGFECDKYTHTILI-----------------------------------DGLCKA 289
EM + G D T+ LI DGLC
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN 478
Query: 290 GNIKGARLHLEYMNKI-----------GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
G +K A + M K G + +++ YN ++ L +GK A ++E M
Sbjct: 479 GKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMP 538
Query: 339 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
V D+ TYSSM+ LCK RL A+++ S
Sbjct: 539 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS 571
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 144/279 (51%), Gaps = 13/279 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC D G +L+ M E G+ D TYN+LI G L+ +LDLL EM+ G
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-----------ICGDLTPCTATFNIMLNG 110
+ PD+ + ++L+ L GK +A +F+ M + P T+NI+++G
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520
Query: 111 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
L A ++ + G VP+ +TY+ +I GLCK RL A + +G +PN
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
+T+TT++ + + GLE+ M R+G + Y T+I F K+G + A D +
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640
Query: 231 QMVTDGVQLDIVSY-NTLINLYCKEGKLEAAYLLLDEME 268
+M++ GV D ++ N L L+ KE +L+ A +L++++
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKE-ELKRAVAMLEKLQ 678
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 154/313 (49%), Gaps = 11/313 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID +C+ DA + M G SP+++T+N+LI G + ++LL EM E G
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D +YN+L+H + +G + A + Q+MI L P T + +L+GLC N +AL
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485
Query: 122 RMFRGLQK-----------HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
MF+ +QK +G P++ TYNILI GL G+ A + +E+ G P+
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
ITY++++ + + ++ +M K ++ + + T+I + K GR+ + +
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+M G+ + ++Y TLI + K G + A + EM G D T ++ GL
Sbjct: 606 EMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 665
Query: 291 NIKGARLHLEYMN 303
+K A LE +
Sbjct: 666 ELKRAVAMLEKLQ 678
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 144/326 (44%), Gaps = 40/326 (12%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
++A +F DM+ P F ++ + + D + +++ +++ ++ ++ IL
Sbjct: 61 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 120
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
IK C +L A ++ G P+ +T+ T++
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLH----------------------- 157
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
G C R+ EA + QM + ++V++ TL+N C+EG++ A
Sbjct: 158 -----GLCVE-------DRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVA 205
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG-FDSNLEAYNCIVDRL 321
LLD M + G + + T+ ++DG+CK G+ A L M ++ N+ Y+ I+D L
Sbjct: 206 LLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSL 265
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
KDG+ A N+F M+ K D FTY+SM+ C + R A +LL L+ +
Sbjct: 266 CKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDV 325
Query: 378 SAQKAVVDGLRHSGCRREAKKIQSKI 403
A+++ G EA+++ ++
Sbjct: 326 VTYNALINAFVKEGKFFEAEELYDEM 351
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 5/246 (2%)
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
P+ + + +M R + L + + M+RK D + + +I F +L A
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
++ G+ D+V++NTL++ C E ++ A L +M + + T T L++GLC+
Sbjct: 137 FGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-----VKDSF 343
G I A L+ M + G Y IVD + K G A+N+ ME + +
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
YS+++ +LCK R A L + G+ +++ G SG +A+++ ++
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 404 RMAKIS 409
KIS
Sbjct: 317 LERKIS 322
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 93/201 (46%), Gaps = 6/201 (2%)
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ F +I L++A D M+ +V + L+ + + + + L +ME++
Sbjct: 52 SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
CD Y+ TILI C + A + K+G ++ +N ++ L + ++ A+N+
Sbjct: 112 CDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNL 171
Query: 334 FESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
F M + T++++++ LC+ R+ A LL ++ G++ + +VDG+
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231
Query: 390 SGCRREAKKIQSKIRMAKISH 410
G A + K M ++SH
Sbjct: 232 KGDTVSALNLLRK--MEEVSH 250
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 196/406 (48%), Gaps = 16/406 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++D C+ + +L +M E I P+VV Y+++I ++ S + +L EM E
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD+++YNS++ G+ +A ++ Q+M+ ++P T+N ++N K A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G +P +TY+ +I G CK RL A + + G +PN IT+ T++
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ G+E+L M G D Y T+I F +G L A D +++M++ G+ D
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPD 464
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEK-----------QGFECDKYTHTILIDGLCKA 289
IV+ +TL++ C GKL+ A + M+K G E D T+ ILI GL
Sbjct: 465 IVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE 524
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 345
G A E M G + Y+ ++D L K ++D A +F+SM K + T+
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 584
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+++++ CKA R+ +L + G+ ++ G R G
Sbjct: 585 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG 630
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 192/400 (48%), Gaps = 5/400 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D ++ +M I D+ ++N LI S L +L ++ ++G+ PDV ++ +L
Sbjct: 96 DLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTL 155
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+H L + EA +F M P TF ++NGLC+ A+ + + + G
Sbjct: 156 LHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL 215
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGL 191
P +TY ++ G+CK G +A +L+++ + H PN + Y+ I+ ++ ++
Sbjct: 216 QPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQ 275
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+ + M+ KG D F Y ++I F GR +A +++M+ + D+V+YN LIN +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
KEGK A L DEM +G + T++ +IDG CK + A M G NL
Sbjct: 336 VKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNL 395
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
+N ++D +ID + + M V D+ TY++++H L +A LL
Sbjct: 396 ITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
+ SG+ ++DGL +G ++A ++ ++ +K
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 192/453 (42%), Gaps = 86/453 (18%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C + ++ + G+ PDVVT+ +L+ G +S +L+L +M E
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFET 178
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+V ++ +LM+ L + G+ EA + M+ L P T+ +++G+CK T +A
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238
Query: 121 LRMFRG------------------------------------LQKHGFVPELVTYNILIK 144
L + R +Q+ G P+L TYN +I
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
G C +GR A +L+E+ + +P+ +TY ++ + K+ E+ M +G
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ Y ++I F K RL A M T G +++++NTLI+ YC +++ LL
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 265 DEMEKQGFECDKYTHTILI-----------------------------------DGLCKA 289
EM + G D T+ LI DGLC
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN 478
Query: 290 GNIKGARLHLEYMNKI-----------GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
G +K A + M K G + +++ YN ++ L +GK A ++E M
Sbjct: 479 GKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMP 538
Query: 339 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
V D+ TYSSM+ LCK RL A+++ S
Sbjct: 539 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS 571
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 144/279 (51%), Gaps = 13/279 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC D G +L+ M E G+ D TYN+LI G L+ +LDLL EM+ G
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-----------ICGDLTPCTATFNIMLNG 110
+ PD+ + ++L+ L GK +A +F+ M + P T+NI+++G
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520
Query: 111 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
L A ++ + G VP+ +TY+ +I GLCK RL A + +G +PN
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
+T+TT++ + + GLE+ M R+G + Y T+I F K+G + A D +
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640
Query: 231 QMVTDGVQLDIVSY-NTLINLYCKEGKLEAAYLLLDEME 268
+M++ GV D ++ N L L+ KE +L+ A +L++++
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKE-ELKRAVAMLEKLQ 678
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 154/313 (49%), Gaps = 11/313 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID +C+ DA + M G SP+++T+N+LI G + ++LL EM E G
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D +YN+L+H + +G + A + Q+MI L P T + +L+GLC N +AL
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485
Query: 122 RMFRGLQK-----------HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
MF+ +QK +G P++ TYNILI GL G+ A + +E+ G P+
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
ITY++++ + + ++ +M K ++ + + T+I + K GR+ + +
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+M G+ + ++Y TLI + K G + A + EM G D T ++ GL
Sbjct: 606 EMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 665
Query: 291 NIKGARLHLEYMN 303
+K A LE +
Sbjct: 666 ELKRAVAMLEKLQ 678
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 146/326 (44%), Gaps = 40/326 (12%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
++A +F DM+ P F ++ + + D + +++ +++ ++ ++NIL
Sbjct: 61 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNIL 120
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
IK C +L A ++ G P+ +T+TT++
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLH----------------------- 157
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
G C R+ EA + QM + ++V++ TL+N C+EG++ A
Sbjct: 158 -----GLCVE-------DRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVA 205
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG-FDSNLEAYNCIVDRL 321
LLD M + G + + T+ ++DG+CK G+ A L M ++ N+ Y+ I+D L
Sbjct: 206 LLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSL 265
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
KDG+ A N+F M+ K D FTY+SM+ C + R A +LL L+ +
Sbjct: 266 CKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDV 325
Query: 378 SAQKAVVDGLRHSGCRREAKKIQSKI 403
A+++ G EA+++ ++
Sbjct: 326 VTYNALINAFVKEGKFFEAEELYDEM 351
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 91/201 (45%), Gaps = 6/201 (2%)
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ F +I L++A D M+ +V + L+ + + + + L +ME++
Sbjct: 52 SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
CD Y+ ILI C + A + K+G ++ + ++ L + ++ A+N+
Sbjct: 112 CDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNL 171
Query: 334 FESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
F M + T++++++ LC+ R+ A LL ++ G++ + +VDG+
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231
Query: 390 SGCRREAKKIQSKIRMAKISH 410
G A + K M ++SH
Sbjct: 232 KGDTVSALNLLRK--MEEVSH 250
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 198/407 (48%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C +++RM E G PD++T N+L+ G + + ++ L+D+M+E G
Sbjct: 262 LINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG 321
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y +++ + + G+ A + + M ++ ++I+++GLCK+ DNA
Sbjct: 322 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 381
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ G ++TYNILI G C AGR +L+++ PN +T++ ++
Sbjct: 382 NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 441
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + E+ M +G D Y ++I F K L +A ++ MV+ G +I
Sbjct: 442 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 501
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++N LIN YCK +++ L +M +G D T+ LI G C+ G + A+ +
Sbjct: 502 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 561
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M N+ Y ++D L +G+ + A+ +FE +E D Y+ ++H +C A +
Sbjct: 562 MVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 621
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A L S GV+ ++ GL G EA+ + K+
Sbjct: 622 VDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 668
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 159/324 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C +D G +L M + I+P+VVT++ LI + L + +L EM+
Sbjct: 401 ILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR 460
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD +Y SL+ + D+AN++ M+ P TFNI++NG CK D+
Sbjct: 461 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 520
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +FR + G V + VTYN LI+G C+ G+L A+ + +E+ PN +TY ++
Sbjct: 521 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 580
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
N + + LEI +++ D Y +I ++ +A D + GV+
Sbjct: 581 LCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPG 640
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +YN +I CK+G L A LL +ME+ G D +T+ ILI G+ + +E
Sbjct: 641 VKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIE 700
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKD 324
+ + GF + ++D L D
Sbjct: 701 ELKRCGFSVDASTIKMVIDMLSDD 724
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 187/420 (44%), Gaps = 39/420 (9%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P V+ ++ L + + L L +M GI ++++ + +++C + K A
Sbjct: 184 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 243
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
+I P T TF+ ++NGLC AL + + + G P+L+T N L+ GLC
Sbjct: 244 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 303
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
+G+ A ++ ++ + G PNA+TY ++ ++ + L +E+L M+ + D
Sbjct: 304 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 363
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC---------------- 252
Y +I K G L A + +M G+ +I++YN LI +C
Sbjct: 364 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 423
Query: 253 -------------------KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
KEGKL A L EM +G D T+T LIDG CK ++
Sbjct: 424 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 483
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
A ++ M G D N+ +N +++ K +ID + +F M V D+ TY++++
Sbjct: 484 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 543
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
C+ +L A +L + V K ++DGL +G +A +I KI +K+
Sbjct: 544 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 603
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 162/338 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ S D + + N M GI+ +++TYN LI G LL +M++
Sbjct: 366 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 425
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P+V +++ L+ + GK EA + ++MI + P T T+ +++G CK + D A
Sbjct: 426 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 485
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+M + G P + T+NILI G CKA R+ + +++ G + +TY T+++
Sbjct: 486 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 545
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K + E+ M + + Y ++ G ++A + E++ ++LD
Sbjct: 546 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 605
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I YN +I+ C K++ A+ L + +G + T+ I+I GLCK G + A L
Sbjct: 606 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 665
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
M + G + YN ++ DG ++ + E ++
Sbjct: 666 KMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 703
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 145/311 (46%), Gaps = 4/311 (1%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K D+A +F+DMI P F+ + + + K + D L + + ++ G L T +
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
I+I C+ +L A + ++ G+ PN IT++T++ + LE++ M
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 285
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G+ D T++ G+ EA +++MV G Q + V+Y ++N+ CK G+ A
Sbjct: 286 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 345
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
LL +ME++ + D ++I+IDGLCK G++ A M G +N+ YN ++
Sbjct: 346 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 405
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
G+ D + M + + T+S ++ + K +L A +L + G+
Sbjct: 406 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 465
Query: 377 KSAQKAVVDGL 387
+++DG
Sbjct: 466 TITYTSLIDGF 476
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 196/406 (48%), Gaps = 16/406 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++D C+ + +L +M E I P+VV Y+++I ++ S + +L EM E
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD+++YNS++ G+ +A ++ Q+M+ ++P T+N ++N K A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G +P +TY+ +I G CK RL A + + G +PN IT+ T++
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ G+E+L M G D Y T+I F +G L A D +++M++ G+ D
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPD 464
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQ-----------GFECDKYTHTILIDGLCKA 289
IV+ +TL++ C GKL+ A + M+K G E D T+ ILI GL
Sbjct: 465 IVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE 524
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 345
G A E M G + Y+ ++D L K ++D A +F+SM K + T+
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 584
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+++++ CKA R+ +L + G+ ++ G R G
Sbjct: 585 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG 630
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 191/400 (47%), Gaps = 5/400 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D ++ +M I D+ ++N LI S L +L ++ ++G+ PDV ++ +L
Sbjct: 96 DLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTL 155
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+H L + EA F M P TF ++NGLC+ A+ + + + G
Sbjct: 156 LHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL 215
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGL 191
P +TY ++ G+CK G +A +L+++ + H PN + Y+ I+ ++ ++
Sbjct: 216 QPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQ 275
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+ + M+ KG D F Y ++I F GR +A +++M+ + D+V+YN LIN +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
KEGK A L DEM +G + T++ +IDG CK + A M G NL
Sbjct: 336 VKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNL 395
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
+N ++D +ID + + M V D+ TY++++H L +A LL
Sbjct: 396 ITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
+ SG+ ++DGL +G ++A ++ ++ +K
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 191/453 (42%), Gaps = 86/453 (18%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C + ++ + G+ PDVVT+ +L+ G +S +LD +M E
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFET 178
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+V ++ +LM+ L + G+ EA + M+ L P T+ +++G+CK T +A
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238
Query: 121 LRMFRG------------------------------------LQKHGFVPELVTYNILIK 144
L + R +Q+ G P+L TYN +I
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
G C +GR A +L+E+ + +P+ +TY ++ + K+ E+ M +G
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ Y ++I F K RL A M T G +++++NTLI+ YC +++ LL
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 265 DEMEKQGFECDKYTHTILI-----------------------------------DGLCKA 289
EM + G D T+ LI DGLC
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN 478
Query: 290 GNIKGARLHLEYMNKI-----------GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
G +K A + M K G + +++ YN ++ L +GK A ++E M
Sbjct: 479 GKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMP 538
Query: 339 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
V D+ TYSSM+ LCK RL A+++ S
Sbjct: 539 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS 571
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 144/279 (51%), Gaps = 13/279 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC D G +L+ M E G+ D TYN+LI G L+ +LDLL EM+ G
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-----------ICGDLTPCTATFNIMLNG 110
+ PD+ + ++L+ L GK +A +F+ M + P T+NI+++G
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520
Query: 111 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
L A ++ + G VP+ +TY+ +I GLCK RL A + +G +PN
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
+T+TT++ + + GLE+ M R+G + Y T+I F K+G + A D +
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640
Query: 231 QMVTDGVQLDIVSY-NTLINLYCKEGKLEAAYLLLDEME 268
+M++ GV D ++ N L L+ KE +L+ A +L++++
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKE-ELKRAVAMLEKLQ 678
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 154/313 (49%), Gaps = 11/313 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID +C+ DA + M G SP+++T+N+LI G + ++LL EM E G
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D +YN+L+H + +G + A + Q+MI L P T + +L+GLC N +AL
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485
Query: 122 RMFRGLQK-----------HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
MF+ +QK +G P++ TYNILI GL G+ A + +E+ G P+
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
ITY++++ + + ++ +M K ++ + + T+I + K GR+ + +
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+M G+ + ++Y TLI + K G + A + EM G D T ++ GL
Sbjct: 606 EMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 665
Query: 291 NIKGARLHLEYMN 303
+K A LE +
Sbjct: 666 ELKRAVAMLEKLQ 678
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 150/321 (46%), Gaps = 5/321 (1%)
Query: 50 SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 109
++DL +ML P V + LM + ++ +PD ++Q M + +FNI++
Sbjct: 63 AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIK 122
Query: 110 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 169
C AL F + K G P++VT+ L+ GLC R+ A ++ ++ P
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRP 182
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
N +T+TT+M R + + +L M G Y T++ K G A + +
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242
Query: 230 EQM-VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+M + ++V Y+ +I+ CK+G+ A L EM+++G D +T+ +I G C
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 344
+G A L+ M + ++ YN +++ K+GK A +++ M + ++ T
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362
Query: 345 YSSMVHNLCKAKRLPSASKLL 365
YSSM+ CK RL +A +
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMF 383
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 147/326 (45%), Gaps = 40/326 (12%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
++A +F DM+ P F ++ + + D + +++ +++ ++ ++NIL
Sbjct: 61 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNIL 120
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
IK C +L A ++ G P+ +T+TT++
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLH----------------------- 157
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
G C R+ EA D+ QM + ++V++ TL+N C+EG++ A
Sbjct: 158 -----GLCVE-------DRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVA 205
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG-FDSNLEAYNCIVDRL 321
LLD M + G + + T+ ++DG+CK G+ A L M ++ N+ Y+ I+D L
Sbjct: 206 LLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSL 265
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
KDG+ A N+F M+ K D FTY+SM+ C + R A +LL L+ +
Sbjct: 266 CKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDV 325
Query: 378 SAQKAVVDGLRHSGCRREAKKIQSKI 403
A+++ G EA+++ ++
Sbjct: 326 VTYNALINAFVKEGKFFEAEELYDEM 351
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 92/201 (45%), Gaps = 6/201 (2%)
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ F +I L++A D M+ +V + L+ + + + + L +ME++
Sbjct: 52 SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN- 332
CD Y+ ILI C + A + K+G ++ + ++ L + ++ A++
Sbjct: 112 CDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDF 171
Query: 333 ---VFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
+FE+ + T++++++ LC+ R+ A LL ++ G++ + +VDG+
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231
Query: 390 SGCRREAKKIQSKIRMAKISH 410
G A + K M ++SH
Sbjct: 232 KGDTVSALNLLRK--MEEVSH 250
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 178/369 (48%), Gaps = 4/369 (1%)
Query: 8 QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 67
F + D + NR+ P +V + L+ + S L L +M G+PP+V+
Sbjct: 42 HFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVY 101
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+ N L++ L + A V ++ P TF ++ GLC AL +F +
Sbjct: 102 TLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKM 161
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
GF P +VTY LI GLCK G A +L+ + P+ + YT+I+ ++R+
Sbjct: 162 IDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQV 221
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
+ S M +G + D F Y +++ A + K T + QMV + D+V ++T+
Sbjct: 222 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 281
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
++ CKEGK+ A+ ++D M ++G E D T+T L+DG C + A + M + GF
Sbjct: 282 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 341
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASK 363
++ +Y +++ K KID A+ +FE M + D+ TY+++++ LC RL A
Sbjct: 342 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIA 401
Query: 364 LLLSCLKSG 372
L + G
Sbjct: 402 LFHEMVARG 410
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 194/403 (48%), Gaps = 4/403 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+++C +++L ++ + G PD T+ +LI G + +L L D+M++
Sbjct: 105 ILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDE 164
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V +Y +L++ L ++G A R+ + M G+ P + +++ LCK+R A
Sbjct: 165 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEA 224
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G P++ TY L+ LC + +L ++ +S P+ + ++T++
Sbjct: 225 FNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDA 284
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K EI+ M ++G D Y T++ + EA + MV G D
Sbjct: 285 LCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPD 344
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++SY TLIN YCK K++ A L +EM ++ + D T+ L+ GLC G ++ A
Sbjct: 345 VISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFH 404
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
M G +L Y+ ++D L K+ ++ A+ + +++E D Y+ ++ +C+A
Sbjct: 405 EMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAG 464
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L +A L + G+ ++ GL G EA K+
Sbjct: 465 ELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKL 507
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 177/375 (47%), Gaps = 4/375 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ + A +L M + PDVV Y S+I ++ ++ + +L +M+ G
Sbjct: 176 LINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQG 235
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+++Y SL+H L L + + M+ + P F+ +++ LCK A
Sbjct: 236 ISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAH 295
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P++VTY L+ G C + A + + G AP+ I+YTT++
Sbjct: 296 EIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGY 355
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + + M RK + D Y T++ +GRL++A +MV G D+
Sbjct: 356 CKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDL 415
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y+ L++ CK LE A LL +E D + I+IDG+C+AG ++ AR
Sbjct: 416 VTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSN 475
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
++ G ++ YN ++ L K G ++ A +F M+ D TY+++ +
Sbjct: 476 LSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNE 535
Query: 358 LPSASKLLLSCLKSG 372
A +LL L G
Sbjct: 536 TLRAIQLLEEMLARG 550
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 203/406 (50%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ + + + ++ +M G+ P+V T N LI + + + +L ++L++G
Sbjct: 71 LLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLG 130
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD ++ +L+ L GK EA +F MI P T+ ++NGLCK T A+
Sbjct: 131 HQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAI 190
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ R +++ P++V Y +I LCK ++ A + ++ G +P+ TYT+++
Sbjct: 191 RLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHAL 250
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++K +L+ M D + TV+ A K G++ EA + ++ M+ GV+ D+
Sbjct: 251 CNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDV 310
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y TL++ +C + +++ A + D M ++GF D ++T LI+G CK I A E
Sbjct: 311 VTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEE 370
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
M + + + + YN ++ L G++ AI +F M ++ D TYS ++ +LCK +
Sbjct: 371 MCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRH 430
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L A LL + S + ++DG+ +G A+ + S +
Sbjct: 431 LEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNL 476
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 154/311 (49%), Gaps = 4/311 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A C + T+LN+M + I PDVV +++++ + ++ + +++D M++ G
Sbjct: 246 LVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRG 305
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ PDV +Y +LM HCL + DEA +VF M+ P ++ ++NG CK D
Sbjct: 306 VEPDVVTYTTLMDGHCL--QSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDK 363
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+ +F + + ++P+ TYN L+ GLC GRL+ A + E+ G P+ +TY+ ++
Sbjct: 364 AMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLD 423
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+NR + + +L A++ D Y +I + G L+ A D + + G+
Sbjct: 424 SLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHP 483
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ +YN +I+ CK G L A L EM+ D T+ + G + A L
Sbjct: 484 SVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLL 543
Query: 300 EYMNKIGFDSN 310
E M GF ++
Sbjct: 544 EEMLARGFSAD 554
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 69/132 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D+ C+ + +L + + ++PD+ YN +I G R L + DL +
Sbjct: 420 ILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSK 479
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P VW+YN ++H L + G +EAN++F +M D +P T+N + G +N T A
Sbjct: 480 GLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRA 539
Query: 121 LRMFRGLQKHGF 132
+++ + GF
Sbjct: 540 IQLLEEMLARGF 551
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 167/330 (50%), Gaps = 39/330 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+IDA C++ Y + + M GIS DVVTY++LI G L ++ LL+EM+
Sbjct: 205 IIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKT 264
Query: 62 IPPDVWSYNSLMHCLFQLGK-----------------PD------------------EAN 86
I P+V++YN L+ L + GK PD +A
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQ 324
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
VF M +TP T+ I++NG CKN+ D AL +F+ + + VP +VTY+ LI GL
Sbjct: 325 HVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK+GR+ ++ E+ D G N ITY++++ +N + + + MK +G +
Sbjct: 385 CKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNT 444
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
F + ++ K GRLK+A + + ++T G L++ +YN +I+ +CK+G LE A +L +
Sbjct: 445 FTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSK 504
Query: 267 MEKQGFECDKYTHTILIDGLCK----AGNI 292
ME G D T I+I L K GN+
Sbjct: 505 MEDNGCIPDAVTFEIIIIALFKKDENGGNV 534
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 200/409 (48%), Gaps = 6/409 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C G+++L ++ + G PD VT N+LI G + +L D++L
Sbjct: 99 ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT-PCTATFNIMLNGLCKNRYTDN 119
G + SY +L++ + ++G A ++ Q I G LT P ++ +++ LCK +
Sbjct: 159 GFQLNQVSYGTLINGVCKIGDTRAAIKLLQK-IDGRLTKPNVVMYSTIIDALCKYQLVSE 217
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +F + G ++VTY+ LI G C G+L+ A +L E+ PN TY ++
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ K K +L+ M + D Y T++ + + +K+A M GV
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+ +Y LIN +CK ++ A L EM ++ T++ LIDGLCK+G I +
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLI 397
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ M+ G +N+ Y+ ++D L K+G +D AI +F M+ + ++FT++ ++ LCK
Sbjct: 398 DEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKG 457
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
RL A ++ L G + ++DG G EA + SK+
Sbjct: 458 GRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKME 506
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 187/398 (46%), Gaps = 4/398 (1%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
+ D + NRM +P ++ +N ++ + S ++ L + GI PD+ + N
Sbjct: 39 NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
L++C +G+ V ++ P T T N ++ GLC AL L
Sbjct: 99 ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
GF V+Y LI G+CK G R A +L+++ PN + Y+TI+ + +
Sbjct: 159 GFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEA 218
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+ S M KG + D Y T+I F G+LKEA + +MV + ++ +YN L++
Sbjct: 219 YGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
CKEGK++ A +L M K + D T++ L+DG +K A+ M+ +G +
Sbjct: 279 LCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 338
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLL 366
+ Y +++ K+ +D A+N+F+ M K+ TYSS++ LCK+ R+P L+
Sbjct: 339 VHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLID 398
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
G +++DGL +G A + +K++
Sbjct: 399 EMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMK 436
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 101/183 (55%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ D + M + + P +VTY+SLI G ++ + DL+DEM +
Sbjct: 344 ILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDR 403
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +V +Y+SL+ L + G D A +F M + P T TF I+L+GLCK +A
Sbjct: 404 GQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDA 463
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ L G+ + TYN++I G CK G L A +L ++ D+G P+A+T+ I+
Sbjct: 464 QEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIA 523
Query: 181 CFR 183
F+
Sbjct: 524 LFK 526
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 3/236 (1%)
Query: 54 LDEMLEM-GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 112
L LE+ GI PD+++ N L++C +G+ + ++ P T TF ++NGLC
Sbjct: 948 LSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLC 1007
Query: 113 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
+ AL L GF V+Y LI G+CK G R A +L+++ P+ +
Sbjct: 1008 LKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVV 1067
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
Y TI+ +++ + M KG + D Y T+I F +G+LKEA + +M
Sbjct: 1068 MYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKM 1127
Query: 233 VTDGVQLDIVSYNTLINLYCKEGK--LEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
V + ++ +YN L++ CKEGK L+ + +L +ME G + + T I+I L
Sbjct: 1128 VLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISAL 1183
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 8/266 (3%)
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
++ A+ + L+ G P+L T NILI C G++ IL ++ G+ P+ IT+
Sbjct: 940 KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999
Query: 175 TTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
TT++ C + + K L + +G+ + Y T+I KIG + A + ++
Sbjct: 1000 TTLINGLCLKGQVNK-ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKID 1058
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
+ D+V YNT+I+ CK + AY L EM +G D T+ LI G C G +K
Sbjct: 1059 GRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLK 1118
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK--IDHAINVFESME----VKDSFTYSS 347
A L M + N+ YN +VD L K+GK +D ++++ ME ++ T+
Sbjct: 1119 EAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEI 1178
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSGV 373
++ L + KLL + G+
Sbjct: 1179 IISALFEKDENDKVEKLLHEMIARGL 1204
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 116/240 (48%), Gaps = 4/240 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C ++IL ++ + G PD +T+ +LI G ++ +L D++L
Sbjct: 966 ILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQ 1025
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT-PCTATFNIMLNGLCKNRYTDN 119
G + SY +L++ + ++G A ++ + I G LT P +N +++ LCK++
Sbjct: 1026 GFQLNQVSYGTLINGVCKIGDTRAAIKLLRK-IDGRLTKPDVVMYNTIIDALCKHQLVSK 1084
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +F + G ++VTYN LI G C G+L+ A +L ++ PN TY ++
Sbjct: 1085 AYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVD 1144
Query: 180 CCFRNRKYKL--GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ K L L +LS M+ G + + +I+A + + + +M+ G+
Sbjct: 1145 ALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 163/322 (50%), Gaps = 35/322 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+IDA C++ Y + + M GIS DVVTY +LI G S L ++ LL+EM+
Sbjct: 205 IIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKT 264
Query: 62 IPPDVWSYNSLMHCLFQLGK-----------------PD------------------EAN 86
I P+V++YN L+ L + GK PD +A
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQ 324
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
VF M +TP ++ I++NG CKN+ D AL +F+ + + VP +VTY+ LI GL
Sbjct: 325 HVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK+GR+ ++ E+ D G N ITY +++ +N + + + MK +G
Sbjct: 385 CKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCS 444
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
F + ++ K GRLK+A + + ++T G LD+ YN +IN +CK+G LE A +L +
Sbjct: 445 FTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSK 504
Query: 267 MEKQGFECDKYTHTILIDGLCK 288
ME+ G + T I+I+ L K
Sbjct: 505 MEENGCVPNAVTFDIIINALFK 526
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 197/409 (48%), Gaps = 6/409 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C G+++L ++ + G P +T+ +LI G ++ +L D++L
Sbjct: 99 ILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQ 158
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT-PCTATFNIMLNGLCKNRYTDN 119
GI D SY +L++ + ++G A ++ + I G LT P +N +++ LCK +
Sbjct: 159 GIKFDQVSYGTLINGVCKIGDTRGAIKLVRK-IDGRLTKPNVEMYNTIIDALCKYQLVSE 217
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +F + G ++VTY LI G C A +L+ A +L E+ PN TY ++
Sbjct: 218 AYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVD 277
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ K K +L+ M + D Y T++ + + LK+A M GV
Sbjct: 278 ALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTP 337
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+ SY LIN +CK ++ A L EM ++ T++ LIDGLCK+G I +
Sbjct: 338 DVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLI 397
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKA 355
+ M G +N+ YN ++D L K+G +D AI +F M+ + SFT++ ++ LCK
Sbjct: 398 DEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKG 457
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
RL A + L G + +++G G EA + SK+
Sbjct: 458 GRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKME 506
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 185/396 (46%), Gaps = 4/396 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D + NRM +P ++ +N ++ + S ++ L + GI PD+ + N L
Sbjct: 41 DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNIL 100
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
++C +G+ V ++ P T TF ++ GLC + AL L G
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGI 160
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+ V+Y LI G+CK G R A +++++ PN Y TI+ + +
Sbjct: 161 KFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYG 220
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ S M KG + D Y T+I F +LKEA + +MV + ++ +YN L++ C
Sbjct: 221 LFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
KEGK++ A +L M K + D T++ L+DG +K A+ M+ +G ++
Sbjct: 281 KEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVH 340
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSC 368
+Y +++ K+ +D A+N+F+ M K+ TYSS++ LCK+ R+ L+
Sbjct: 341 SYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
G+ +++DGL +G A + +K++
Sbjct: 401 RDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMK 436
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 110/201 (54%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ D + M + + P +VTY+SLI G ++ +S DL+DEM +
Sbjct: 344 ILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDR 403
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GIP +V +YNSL+ L + G D A +F M + PC+ TF I+L+GLCK +A
Sbjct: 404 GIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDA 463
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
F+ L G+ ++ YN++I G CK G L A +L ++ ++G PNA+T+ I+
Sbjct: 464 QEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINA 523
Query: 181 CFRNRKYKLGLEILSAMKRKG 201
F+ + ++L M +G
Sbjct: 524 LFKKDENDKAEKLLRQMICRG 544
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 192/382 (50%), Gaps = 4/382 (1%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G+ P+V T+N LI G ++ +L L+++M E G PD +YN+++ L + + +
Sbjct: 206 GVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQV 265
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+ M L P T+NI+++G CK ++ A + + G +P++ TYN +++G
Sbjct: 266 RDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRG 325
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LC G++ A + ++ P+ +TY T++ CF +R +++ MK +G +
Sbjct: 326 LCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKEN 385
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
G + +I F G++ EA++ M +MV G D +YNT+IN YCK GK+ AY ++D
Sbjct: 386 GVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMD 445
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM ++G + D +T L+ +C + A K G+ + Y ++ KD
Sbjct: 446 EMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDE 505
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+ D A+ ++E M+ V TY++++ LC + + A L L+ G+ +S
Sbjct: 506 QADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSN 565
Query: 382 AVVDGLRHSGCRREAKKIQSKI 403
++ G G +A + +K+
Sbjct: 566 IIIHGYCWEGAVEKAFQFHNKM 587
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 190/407 (46%), Gaps = 4/407 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ YC+ ++ M G+ PDV TYN+++ G + ++ L D+M
Sbjct: 286 ILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESF 345
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PDV +YN+L+ F+ D A ++ ++M + T NIM+ C D A
Sbjct: 346 KLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEA 405
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + GF P+ TYN +I G CKAG++ A ++ E+G G + T T++
Sbjct: 406 SNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHT 465
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ + +++GY D Y T+I + K + A E+M G+
Sbjct: 466 MCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVAT 525
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++YNT+I C GK + A L+E+ ++G D+ T I+I G C G ++ A
Sbjct: 526 IITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHN 585
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + ++ N ++ L ++G ++ + +F + K D+ TY+ ++ + CK +
Sbjct: 586 KMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKER 645
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
RL A L+ + + A+V GL +G EA+K+ K
Sbjct: 646 RLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKF 692
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 175/362 (48%), Gaps = 36/362 (9%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
G+ I N+M+ P+++T N+L+ R+ NS
Sbjct: 157 GHQIFNKMKRLRFRPNLLTCNTLLNALVRS-------------------------NSSHS 191
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
+F + VFQD + + P TFNI+++G C + T+ ALR+ + ++G P
Sbjct: 192 LVF-------SREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCP 244
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
+ VTYN ++ LCK +L R +L ++ +SG PN TY ++ + + K E++
Sbjct: 245 DNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVI 304
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
M KG D + Y T++ G++ EA ++M + + D+V+YNTLI+ +
Sbjct: 305 ELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEH 364
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
+AA+ L++EM+ +G + + TH I+I C G I A + M + GF + Y
Sbjct: 365 RGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTY 424
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
N +++ K GK+ A + + M K D+FT ++++H +C K+L A L + K
Sbjct: 425 NTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARK 484
Query: 371 SG 372
G
Sbjct: 485 RG 486
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 179/389 (46%), Gaps = 24/389 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I +C D ++ +M E+G SPD TYN++I G + ++ + ++DEM
Sbjct: 391 IMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRK 450
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ D ++ N+L+H + + D+A + T+ ++ G K+ D A
Sbjct: 451 GLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRA 510
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L+++ +++ G V ++TYN +I+GLC +G+ A L EL + G P+ T I+
Sbjct: 511 LKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHG 570
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + M D F ++ + G L++ ++ G +D
Sbjct: 571 YCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMD 630
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
V+YN +I+ +CKE +LE A+ L+ EME + E D+YT+ ++ GL KAG + A +L L
Sbjct: 631 TVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLAL 690
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-FTYSSMVHNLCKAKRL 358
++ K G+ K S E+ S YS + +LC +
Sbjct: 691 KFAEK-----------------GQQVKTQDT-----SPELGTSDMMYSEQISSLCTQGKY 728
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGL 387
A KL + GV + K ++DGL
Sbjct: 729 KDAMKLFQQAEQKGVSLNKYTYIKLMDGL 757
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 140/298 (46%), Gaps = 11/298 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C D YT+ + R+ G D VTY +LI G ++ +L L +EM E G
Sbjct: 462 LLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETG 521
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I + +YN+++ L GK D+A +++ L P +T NI+++G C + A
Sbjct: 522 IVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAF 581
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +H P++ T NIL++GLC+ G L + G + +TY I+
Sbjct: 582 QFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSF 641
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R+ + ++++ M+ K D + Y ++ K GR +EA + G Q+
Sbjct: 642 CKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKT 701
Query: 242 -----------VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+ Y+ I+ C +GK + A L + E++G +KYT+ L+DGL K
Sbjct: 702 QDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLK 759
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 112/284 (39%), Gaps = 46/284 (16%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI Y + D + M+E GI ++TYN++I G + ++D L+E+LE G
Sbjct: 497 LIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKG 556
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD + N ++H G ++A + M+ L P T NI+L GLC+ + L
Sbjct: 557 LVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGL 616
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F G + VTYNI+I CK RL A ++ E+ P+ TY I+
Sbjct: 617 TLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGL 676
Query: 182 FR----------------------------------------------NRKYKLGLEILS 195
+ KYK +++
Sbjct: 677 TKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQ 736
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
++KG + + + Y ++ +K + T + MV+ +Q
Sbjct: 737 QAEQKGVSLNKYTYIKLMDGLLKRRKSFTTTSLLPFMVSATIQF 780
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 104/233 (44%), Gaps = 19/233 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C+ + G T+ N G D VTYN +I+ + L + DL+ EM
Sbjct: 601 ILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGK 660
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVF-------QDMICGDLTPCTATFNIM----LN 109
+ PD ++YN+++ L + G+ +EA ++ Q + D +P T ++M ++
Sbjct: 661 NLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQIS 720
Query: 110 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG--- 166
LC +A+++F+ ++ G TY L+ GL K + T +L + +
Sbjct: 721 SLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKSFTTTSLLPFMVSATIQF 780
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 219
N + Y I+ C ++L +E+ + R Y + C ++ +F +
Sbjct: 781 FDRNPMRYAHILWCF----GFELEIEVPEGVLRCLYKLSLYS-CCLLTSFENV 828
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 189/372 (50%), Gaps = 13/372 (3%)
Query: 2 LIDAYCQFVSFDAGYT-----ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 56
LIDA+ + AGYT + M ++G+ PD T+N L+ + + L +E
Sbjct: 95 LIDAFVK-----AGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEE 149
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
M P+V +Y+ L+ + + G ++A +VF DM P T+ M++GL K+ +
Sbjct: 150 MQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGH 209
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
D A +F + G V V YN LI GL ++GR A + +E+ G P+ +T+T+
Sbjct: 210 VDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTS 269
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ + I + G D Y +I K RL EA + ++ DG
Sbjct: 270 LVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDG 329
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
+ D+ ++N L++ CK G++ A++LL +M++ G D + LIDGL K+G ++ A
Sbjct: 330 LVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAG 389
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---DSFTYSSMVHNLC 353
L M +G++ ++ YN ++D K G+I+ A+ +FE + K ++ TY+++++ LC
Sbjct: 390 QLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTVTYNTILNGLC 449
Query: 354 KAKRLPSASKLL 365
A R+ A KL
Sbjct: 450 MAGRVDEAYKLF 461
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 172/351 (49%), Gaps = 4/351 (1%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
L RM + YNSLI + +L + M + G+ PD +++N LM+ +
Sbjct: 77 LKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKK 136
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
+ D ++F++M + +P T++I+++ +CK + AL++F ++ G P + T
Sbjct: 137 AKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFT 196
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
Y +I GL K+G + A ++ +E+ G + Y +++ R+ + ++ M
Sbjct: 197 YTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREML 256
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
KG D + +++ GR EA ++ G LD+ YN LI+ CK +L+
Sbjct: 257 SKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLD 316
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A+ + E+E+ G D YT L+DGLCK+G I A + L M + G ++ YN ++
Sbjct: 317 EAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLI 376
Query: 319 DRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 365
D L K G+++ A + M+ D TY++++ CK R+ A +L
Sbjct: 377 DGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLF 427
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 183/363 (50%), Gaps = 9/363 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++A+ + D+ + + M+ SP+V+TY+ LI + + +L + +M
Sbjct: 129 VLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSR 188
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P++++Y S++ L + G D+A +F++M L +N +++GL ++ D A
Sbjct: 189 GCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAA 248
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++FR + G P+ VT+ L+ GL AGR AR I +E D G A + Y ++
Sbjct: 249 AKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDT 308
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++++ EI ++ G D + + ++ K GR+ +A + M G D
Sbjct: 309 LCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPD 368
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ YNTLI+ K G++E A LL EM+ G+E D T+ LID CK G I+ A E
Sbjct: 369 VTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFE 428
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--------DSFTYSSMVHNL 352
++ GF +N YN I++ L G++D A +F M+ + D TY+++++
Sbjct: 429 EISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGA 487
Query: 353 CKA 355
+A
Sbjct: 488 RQA 490
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 4/218 (1%)
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+E L M+ Y ++I AFVK G ++A M G++ D ++N L+N
Sbjct: 74 VEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNA 133
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+ K ++++ + L +EM+ Q + T++ILID +CK G ++ A M G N
Sbjct: 134 FKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPN 193
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLL 366
+ Y ++D LGK G +D A +FE M V Y+S++H L ++ R +A+KL
Sbjct: 194 IFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFR 253
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
L G++ ++V GL +G EA++I + R
Sbjct: 254 EMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEAR 291
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 118/262 (45%), Gaps = 4/262 (1%)
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
L +G AG L + LK + A A Y +++ + + L + M + G
Sbjct: 60 LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
D + + ++ AF K R+ E+M ++++Y+ LI+ CK G +E A
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+ +M+ +G + +T+T +IDGL K+G++ A E M G + YN ++ L
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
G+ G+ D A +F M K D T++S+V+ L A R A ++ G +
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDV 299
Query: 378 SAQKAVVDGLRHSGCRREAKKI 399
+ ++D L S EA +I
Sbjct: 300 NLYNVLIDTLCKSKRLDEAWEI 321
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 85/153 (55%), Gaps = 5/153 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+ + +L M+ AG +PDV YN+LI G ++ + + LL EM +G
Sbjct: 340 LMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLG 399
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV +YN+L+ + G+ ++A R+F+++ T T+N +LNGLC D A
Sbjct: 400 YEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFAN-TVTYNTILNGLCMAGRVDEAY 458
Query: 122 RMFRGLQKH---GFV-PELVTYNILIKGLCKAG 150
++F G+++ G + P+ VTY L+ G +AG
Sbjct: 459 KLFNGMKQETVDGVIDPDFVTYTTLLNGARQAG 491
>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
Length = 601
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 193/379 (50%), Gaps = 7/379 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M++ C D +L M+ +G+ DVVTY +LI G + L +L+LL EM
Sbjct: 120 MVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGS 179
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V Y+ L+ + G+ + ++VF++M + P F ++ LCK A
Sbjct: 180 GVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKA 239
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + + G P +VTYN+LI LCK G +R A + E+ D G AP+ +TY T++
Sbjct: 240 VKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAG 299
Query: 181 CFRNRKYKLGLEILSAMKRKGYTF---DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + +L M +G T D + +VI KIGR+++A E M G
Sbjct: 300 LSGVLEMDGAMGLLEEMI-QGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGC 358
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
++V+YN LI + + K+ A L+ E+ G E D +T++ILI+G K + A +
Sbjct: 359 MCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEM 418
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---DSFTYSSMVHNLCK 354
L M + G + L Y ++ L + G ++ A+ +F M++ D+ YS+M++ CK
Sbjct: 419 FLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGLDAVAYSTMMYGACK 478
Query: 355 AKRLPSASKLLLSCLKSGV 373
+ + +A +LL L G+
Sbjct: 479 SGDIKAAKQLLQDMLDEGL 497
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 186/368 (50%), Gaps = 6/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
ID C+ + + M + G+ P+VVTYN LI + + +L L +EM + G
Sbjct: 226 FIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKG 285
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD--LTPCTATFNIMLNGLCKNRYTDN 119
+ PDV +YN+L+ L + + D A + ++MI GD + P TFN +++GLCK
Sbjct: 286 VAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQ 345
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+ + + + G + LVTYN LI G + ++ A ++ EL SG P++ TY+ ++
Sbjct: 346 AISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILIN 405
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + L M ++G + F Y ++AA ++G +++A +M + L
Sbjct: 406 GFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMN-CGL 464
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D V+Y+T++ CK G ++AA LL +M +G D T++ILI+ K G+++ A L
Sbjct: 465 DAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVL 524
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLP 359
+ M GF ++ ++ ++ +G+I+ +++ M K+ + C RLP
Sbjct: 525 KQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKNVAIDPKFI---CTLVRLP 581
Query: 360 SASKLLLS 367
LL S
Sbjct: 582 QQMPLLWS 589
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 143/281 (50%), Gaps = 6/281 (2%)
Query: 99 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 158
P ++ +++ GLC +R TD A+ + R +Q G ++VTY LI+GLC A L A +
Sbjct: 113 PNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALEL 172
Query: 159 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 218
L E+ SG PN I Y+ +++ R+ +++ ++ M R G D + I K
Sbjct: 173 LGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCK 232
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
GR+ +A + MV G++ ++V+YN LIN CKEG + A L +EM+ +G D T
Sbjct: 233 KGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVT 292
Query: 279 HTILIDGLCKAGNIKGARLHLEYM--NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
+ LI GL + GA LE M + ++ +N ++ L K G++ AI+V E
Sbjct: 293 YNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREM 352
Query: 337 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
M + + TY+ ++ + ++ A L+ + SG+
Sbjct: 353 MAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGL 393
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 133/278 (47%), Gaps = 10/278 (3%)
Query: 133 VPELVTYNILIKGLC-KAGRLRTARWILKELGDSGHA---PNAITYTTIMKCCFRNRKYK 188
V + V+YNI++ LC + G LR A +L ++ H PNA++YT +M+ +R+
Sbjct: 73 VRDAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTD 132
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
+ +L +M+ G D Y T+I L A + + +M GV +++ Y+ L+
Sbjct: 133 EAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLL 192
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
YC+ G+ + + +EM + G E D T ID LCK G I A + M + G +
Sbjct: 193 RGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLE 252
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
N+ YN +++ L K+G + A+ + M+ K D TY++++ L + A L
Sbjct: 253 PNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGL 312
Query: 365 LLSCLKSGVRILKSAQ--KAVVDGLRHSGCRREAKKIQ 400
L ++ + +V+ GL G R+A ++
Sbjct: 313 LEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVR 350
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 192/424 (45%), Gaps = 41/424 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D + + +L +MR+AG PD VTYN+LI G + L ++ LL EMLE G
Sbjct: 584 VVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAG 643
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y +L H L + G+ DEA + M P T++ +++GLCK AL
Sbjct: 644 FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEAL 703
Query: 122 RMFRGLQKHGFV-PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
F + + V P ++ Y+ LI GLCKAGR+ A L+ + +G P+ +T++ ++
Sbjct: 704 GYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILING 763
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ-- 238
+ GLE+ M +G D + Y +I A+ G A +E+M T G+
Sbjct: 764 LCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKN 823
Query: 239 -------------------------------LDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
D +SYNTLI + E A LL M
Sbjct: 824 TVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAM 883
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
G D + ++DGL KAG+ + A L+ M G +L Y ++ L K ++
Sbjct: 884 VADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQL 943
Query: 328 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
A + FE M K D+ YSS++ CKA ++ A KLL S SG+ + +
Sbjct: 944 PLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLRS---SGIEPTITMYSTM 1000
Query: 384 VDGL 387
VD L
Sbjct: 1001 VDSL 1004
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 193/400 (48%), Gaps = 28/400 (7%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREA-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
+L+ C+ Y + MR G SP+VVT+++LI G ++ + ++ + M+
Sbjct: 350 ILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVA 409
Query: 60 M-GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT-------------------- 98
+ GI P+ ++Y L+ L + G + F+ M+ +
Sbjct: 410 VEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVC 469
Query: 99 -PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 157
P T+N ++ GL K+ +AL + + + G P+++T+N ++ GLCK R+ A
Sbjct: 470 RPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHN 529
Query: 158 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 217
+ K + G PN +TY+T++ + K L++L+ M G + Y TV+ +
Sbjct: 530 VFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLL 589
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 277
K+GR+++A + QM G D V+YNTLI+ + K +L A LL EM + GF
Sbjct: 590 KVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVV 649
Query: 278 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
T+T L GLC++G A L+YM G N Y+ IVD L K G++ A+ FE M
Sbjct: 650 TYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKM 709
Query: 338 E-----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
YS+++ LCKA R+ A + L +++G
Sbjct: 710 ARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAG 749
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 176/347 (50%), Gaps = 12/347 (3%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
+++L RM G P+++T+ +I G + + + ++DEM++ G PDV + L+H
Sbjct: 90 AFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLH 149
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
L +LG+ DEA FQ ++ TP T+N M++GL K + A + + L + P
Sbjct: 150 ALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSP 209
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
+ T+ I + GL KAG L A + +G +PN +TY ++ + K + L +L
Sbjct: 210 TVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLL 269
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
+ K F + +++ + RL+EA ++ M ++V +N+L+N C+
Sbjct: 270 ---RDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAM---PCVPNVVCFNSLMNGLCQA 323
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI-GFDSNLEA 313
+++ A+ L D M++ G D T+ IL+ GLCK I A H+E M + G N+
Sbjct: 324 RRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVT 383
Query: 314 YNCIVDRLGKDGKIDHAINVFESMEV-----KDSFTYSSMVHNLCKA 355
++ ++ L G+++ A V+E M + FTY+ ++ LCKA
Sbjct: 384 FSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKA 430
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 183/367 (49%), Gaps = 10/367 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ +T + + G P VVTY+++I G R++ + LL+EM
Sbjct: 6 VLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGR 65
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ +YN+L++ L G+ EA + + M P TF +++ GLCK + A
Sbjct: 66 GCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAA 125
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+ + GFVP++ + +L+ LC+ GR+ A + +++ G P+A+TY T++
Sbjct: 126 FRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDG 185
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ + + +L + + F + + K G L A ++ + M GV +
Sbjct: 186 LYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPN 245
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+Y+ LI+ CK GKL+ A LL + Q + + L+ GLC+A ++ A L+
Sbjct: 246 TVTYDALIDGLCKAGKLDIALGLLRDKNSQA---GMFAFSSLLHGLCQAHRLEEAIQLLK 302
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + N+ +N +++ L + ++D A +F+ M+ D TY+ ++ LCK +
Sbjct: 303 AMPCV---PNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLR 359
Query: 357 RLPSASK 363
R+P A +
Sbjct: 360 RIPEAYR 366
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 172/339 (50%), Gaps = 14/339 (4%)
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+YN L++ L + G+ +A F+ I P T++ +++GLC++ D ++ +
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
G P VTYN L+ L GR + A +L+ + +G P IT+ I+K + +
Sbjct: 63 AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
+ ++ M +G+ D + ++ A ++GR+ EA + +Q++ G D V+YNT+
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
++ K G+LEAA ++L + + +T TI +DGL KAGN+ GA + M + G
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-FTYSSMVHNLCKAKRLPSASKLL- 365
N Y+ ++D L K GK+D A+ + + F +SS++H LC+A RL A +LL
Sbjct: 243 SPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLK 302
Query: 366 -------LSCLKSGVRILKSAQKA-----VVDGLRHSGC 392
+ C S + L A++ + D ++ SGC
Sbjct: 303 AMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGC 341
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 173/352 (49%), Gaps = 4/352 (1%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-EMGIPPD 65
C+ FD IL+ M G +P+ +TY+S++ G + ++ +L ++M + + P
Sbjct: 659 CRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPH 718
Query: 66 VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 125
V +Y++L+ L + G+ DEA + MI P TF+I++NGLC D L +F
Sbjct: 719 VIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFC 778
Query: 126 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 185
G+ + G ++ YN +I C G A +L+E+ G A N +T+ ++K N
Sbjct: 779 GMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGND 838
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
+ + ++ D Y T+I + V R ++A + + MV DG D +Y
Sbjct: 839 RIDEAVSYFHSIPED--CRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYM 896
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
T+++ K G E A LL EM +G D T+TI+I GL KA + A + E M +
Sbjct: 897 TVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRK 956
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-YSSMVHNLCKAK 356
+ Y+ ++D K K+D A + S ++ + T YS+MV +LCK +
Sbjct: 957 NLKPDAIVYSSLIDAFCKADKVDDAWKLLRSSGIEPTITMYSTMVDSLCKNR 1008
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 138/260 (53%), Gaps = 4/260 (1%)
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
+VTYN+LI GLCKAGR+ A ++ G P +TY+T++ R+ + G ++L
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M +G + Y T++ A + GR KEA +E+M +G +++++ +I CKEG
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
++EAA+ ++DEM +GF D HT+L+ LC+ G + A + + IGF + YN
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180
Query: 316 CIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
+VD L K G+++ A V ES FT++ V L KA L A + S ++
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240
Query: 372 GVRILKSAQKAVVDGLRHSG 391
GV A++DGL +G
Sbjct: 241 GVSPNTVTYDALIDGLCKAG 260
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 195/422 (46%), Gaps = 35/422 (8%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL-DEMLEMG 61
+D + + Y + M + G+SP+ VTY++LI G + L +L LL D+ + G
Sbjct: 218 VDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAG 277
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ ++++SL+H L Q + +EA ++ + M C P FN ++NGLC+ R D A
Sbjct: 278 M----FAFSSLLHGLCQAHRLEEAIQLLKAMPC---VPNVVCFNSLMNGLCQARRVDEAF 330
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHAPNAITYTTIMKC 180
+F +++ G +++TYNIL+KGLCK R+ A R + G +PN +T++T+++
Sbjct: 331 ELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQG 390
Query: 181 CFRNRKYKLGLEILSAM-KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV------ 233
+ E+ M +G + + F Y ++ K G + EQM+
Sbjct: 391 LCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRS 450
Query: 234 ----------TDGVQLDI-----VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
D + + + V+YNTL+ K G + A LL+ M + G D T
Sbjct: 451 SSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVIT 510
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
++DGLCK I A + + G N+ Y+ ++D L K K+D A+ + M
Sbjct: 511 FNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMV 570
Query: 339 V----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
++ TYS++V L K R+ A +L +G ++DG R
Sbjct: 571 ELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLR 630
Query: 395 EA 396
EA
Sbjct: 631 EA 632
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 160/337 (47%), Gaps = 5/337 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ D Y L RM AG PDVVT++ LI G + L+L M E G
Sbjct: 725 LIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERG 784
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
D+++YN++++ G+ A + ++M + T T I++ LC N D A+
Sbjct: 785 CKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAV 844
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F + + + ++YN LI L + R A +L+ + G +P+A Y T+M
Sbjct: 845 SYFHSIPED--CRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGL 902
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ ++ ++L M+ +G++ D Y +I+ K +L A DY E+M+ ++ D
Sbjct: 903 FKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDA 962
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ Y++LI+ +CK K++ A+ LL G E ++ ++D LCK A +
Sbjct: 963 IVYSSLIDAFCKADKVDDAWKLL---RSSGIEPTITMYSTMVDSLCKNRGTDKALEVIRE 1019
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
M + + + + +G++D A+ + ++
Sbjct: 1020 MKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 132/297 (44%), Gaps = 9/297 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C D G + M E G D+ YN++I S + LL+EM
Sbjct: 759 ILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTH 818
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYTD 118
GI + ++ ++ L + DEA F + C D ++N ++ L +R ++
Sbjct: 819 GIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRD----EISYNTLITSLVASRRSE 874
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
AL + R + G P+ Y ++ GL KAG A +L+E+ GH+P+ TYT ++
Sbjct: 875 QALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMI 934
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ ++ L + M RK D Y ++I AF K ++ +A + + G++
Sbjct: 935 SGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLR---SSGIE 991
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
I Y+T+++ CK + A ++ EM+ + E + T L G + A
Sbjct: 992 PTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEA 1048
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 194/375 (51%), Gaps = 4/375 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ A +L ++ + P+VV YN++I ++ L+ + DL EM+
Sbjct: 175 LINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKR 234
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV +Y +L++ +G+ EA +F M+ ++ P TFNI+++GLCK A
Sbjct: 235 IFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKAR 294
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K G +VTYN L+ G + A ++ + G P+ +Y+ ++
Sbjct: 295 NVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGL 354
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + + M K + Y ++I +K GR+ +A D + +M G D+
Sbjct: 355 CKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADV 414
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y++L++ CK +++ A L+ +++ QG + + YT+TIL+DGLCK G +K A+ +
Sbjct: 415 ITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQD 474
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G+ +++ YN +V+ L K+G D A+++ ME + D+ TY ++V L + +
Sbjct: 475 LLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDK 534
Query: 358 LPSASKLLLSCLKSG 372
A KLL + G
Sbjct: 535 NDKAVKLLREMIVQG 549
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 184/392 (46%), Gaps = 4/392 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + +M I PD+ T+N LI L+ + +L ++ ++G PD + +
Sbjct: 80 FHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITT 139
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
L+ L GK EA D+I ++ ++NGLCK T AL++ R +
Sbjct: 140 LIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLL 199
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
P +V YN +I LCK + A + E+ P+ +TYTT++ C + K +
Sbjct: 200 VQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAV 259
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+ + M K D + + ++ K G +K+A + + M+ GV +IV+YN+L++ Y
Sbjct: 260 GLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGY 319
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
+ A + + M ++G D +++I+I+GLCK + A + M+ N
Sbjct: 320 FLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNT 379
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
YN ++D L K G+I A ++ M + D TYSS++ LCK ++ A L+
Sbjct: 380 VTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITK 439
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
G++ +VDGL +G ++A+ +
Sbjct: 440 IKDQGIQPNIYTYTILVDGLCKNGRLKDAQAV 471
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 165/339 (48%), Gaps = 4/339 (1%)
Query: 31 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 90
+ +N +++ + + ++ +M I PD++++N L++C LG + A V
Sbjct: 64 IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLA 123
Query: 91 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 150
+ P T T ++ GLC N AL + GF + V+Y LI GLCK G
Sbjct: 124 KIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTG 183
Query: 151 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
R A +L+++ PN + Y TI+ +++ ++ S M K D Y
Sbjct: 184 ETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYT 243
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
T+I + +GRLKEA QM+ ++ D+ ++N L++ CKEG+++ A +L M KQ
Sbjct: 244 TLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQ 303
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
G + + T+ L+DG A M + G ++++Y+ +++ L K +D A
Sbjct: 304 GVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEA 363
Query: 331 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
+N+F+ M K ++ TY+S++ L K R+ A L+
Sbjct: 364 VNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLV 402
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 193/410 (47%), Gaps = 8/410 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C + +++L ++ + G PD VT +LI G N + +L D+++
Sbjct: 104 ILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAK 163
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D SY +L++ L + G+ A +V + + + P +N +++ LCK++ +A
Sbjct: 164 GFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHA 223
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + P++VTY LI G GRL+ A + ++ P+ T+ ++
Sbjct: 224 SDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDG 283
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + K +L+ M ++G + Y +++ + + + +AT M GV D
Sbjct: 284 LCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPD 343
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ SY+ +IN CK ++ A L EM + + T+ LIDGL K G I A +
Sbjct: 344 VQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVN 403
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS------FTYSSMVHNLCK 354
M+ G +++ Y+ ++D L K+ ++D AI + ++KD +TY+ +V LCK
Sbjct: 404 EMHNRGQPADVITYSSLLDALCKNHQVDKAITLIT--KIKDQGIQPNIYTYTILVDGLCK 461
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
RL A + L G + +V+GL G EA + SK+
Sbjct: 462 NGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKME 511
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 110/201 (54%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ D + M ++P+ VTYNSLI G + +S + DL++EM
Sbjct: 349 IMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNR 408
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P DV +Y+SL+ L + + D+A + + + P T+ I+++GLCKN +A
Sbjct: 409 GQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDA 468
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ L G+ ++ YN+++ GLCK G A ++ ++ D+G P+A+TY T+++
Sbjct: 469 QAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRA 528
Query: 181 CFRNRKYKLGLEILSAMKRKG 201
F N K +++L M +G
Sbjct: 529 LFENDKNDKAVKLLREMIVQG 549
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 127/288 (44%), Gaps = 41/288 (14%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
FN +L+ L K + A+ + ++ P+L T+NILI C G L A +L ++
Sbjct: 67 FNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIF 126
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
G P+ +T TT++K G C G+++
Sbjct: 127 KLGFHPDTVTITTLIK----------------------------GLCLN-------GKVR 151
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
EA + + ++ G LD VSY TLIN CK G+ AA +L +++ + + + +I
Sbjct: 152 EALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTII 211
Query: 284 DGLCKAG-NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 340
D LCK I + L E + K F ++ Y ++ G++ A+ +F M +K
Sbjct: 212 DSLCKDKLVIHASDLCSEMIVKRIF-PDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNI 270
Query: 341 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
D +T++ +V LCK + A +L +K GV +++DG
Sbjct: 271 KPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDG 318
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 196/404 (48%), Gaps = 7/404 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID++C+ D L +M AGI V YNSLI G + LS ++ DEM++
Sbjct: 406 ILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDK 465
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK-NRYTDN 119
G+ P V SY SL+ GK EA R++ +M + P T TF +++ L + NR TD
Sbjct: 466 GLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTD- 524
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A R+F + + +P VTYN++I+G CK G A +L ++ G P+ TY ++
Sbjct: 525 AFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLIS 584
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + + + R+ + + Y ++ + K GRL++A +MV GV +
Sbjct: 585 SLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDM 644
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+V Y LI+ KE A + LL M Q DK +T +IDG KAG++K A
Sbjct: 645 DLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIW 704
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKA 355
+ M G N+ Y +++ L K G +D A +++ M V +S TY + +L +
Sbjct: 705 DIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLARE 764
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ A +L LK G+ + +V G G EA K+
Sbjct: 765 GSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKL 807
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 190/399 (47%), Gaps = 6/399 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I ++C+ +F ++ RM + + +VV YN LI G +N + ++++ + +++ G
Sbjct: 234 VIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKG 291
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ +Y +L+ L ++ + + V +MI P A + ++ GL + +A
Sbjct: 292 LTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAF 351
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++K G +P L YN LI LCK G+ A + KE+G+ G N +TY+ ++
Sbjct: 352 DLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSF 411
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R K + L M G + Y ++I K+G L A + ++M+ G++ +
Sbjct: 412 CRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTV 471
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
VSY +LI+ YC +GKL A+ L EM +G + YT T LI L +A + A +
Sbjct: 472 VSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDE 531
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M + N YN +++ K+G A + M V D++TY ++ +LC R
Sbjct: 532 MLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGR 591
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ A K + + ++ + A++ G G R+A
Sbjct: 592 VCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDA 630
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 191/399 (47%), Gaps = 4/399 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ F+ G +++ M E G P +SL+ G R + + DL++ + ++G
Sbjct: 302 LVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVG 361
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P ++ YN+L++ L + GK DEA +F++M L T++I+++ C+ D A+
Sbjct: 362 AMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAI 421
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ G + YN LI G CK G L A E+ D G P ++YT+++
Sbjct: 422 HFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGY 481
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K + M KG + + + T+I+A + R+ +A ++M+ + +
Sbjct: 482 CNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNE 541
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN +I +CKEG A+ LL++M ++G D YT+ LI LC G + A+ ++
Sbjct: 542 VTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDD 601
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
+++ F N Y+ ++ K+G++ A+ V M + D Y+ ++ K +
Sbjct: 602 LHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQD 661
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ LL + +R K +++DG +G ++A
Sbjct: 662 TSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKA 700
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 183/390 (46%), Gaps = 6/390 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +Y Q I MR+ + P V T ++ G + + L L E+L M
Sbjct: 163 LLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSM 222
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD++ Y +++ +L +A + Q M DL +N++++GLCKN+ A
Sbjct: 223 GIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLN--VVVYNVLIHGLCKNKRVWEA 280
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + GL + G VTY L+ GLCK ++ E+ + G P +++++
Sbjct: 281 VEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEG 340
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R K ++++ +K+ G F Y +I + K G+ EA ++M G+ +
Sbjct: 341 LRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCAN 400
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+Y+ LI+ +C+ GKL+ A L +M G + Y + LI+G CK GN+ A +
Sbjct: 401 DVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFD 460
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G + +Y ++ GK+ A ++ M K +++T+++++ L +A
Sbjct: 461 EMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRAN 520
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
R+ A +L L+ + + +++G
Sbjct: 521 RMTDAFRLFDEMLEQNMMPNEVTYNVMIEG 550
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 200/458 (43%), Gaps = 73/458 (15%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C+ + A + + M + G+ P VV+Y SLI+G L + L EM G
Sbjct: 442 LINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKG 501
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+ +++ +L+ LF+ + +A R+F +M+ ++ P T+N+M+ G CK T A
Sbjct: 502 IAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAF 561
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G VP+ TY LI LC GR+ A+ + +L N + Y+ ++
Sbjct: 562 ELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGY 621
Query: 182 FRNRKYKLGLEILSAMKRKGYTFD-------------------GFG-------------- 208
+ + + L + M ++G D FG
Sbjct: 622 CKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDK 681
Query: 209 --YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y ++I + K G +K+A + M+ +G +IV+Y TLIN CK G ++ A LL E
Sbjct: 682 VIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKE 741
Query: 267 M-------------------------EK---------QGFECDKYTHTILIDGLCKAGNI 292
M EK +G + ++ IL+ G CK G +
Sbjct: 742 MLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVSYNILVRGFCKLGRV 801
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 348
+ A L+ M + Y+ I+ + + G +D AI +++M K D+ Y+ +
Sbjct: 802 EEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFL 861
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
++ C A L A +L ++ GV+ ++ K++ G
Sbjct: 862 IYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHG 899
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 144/293 (49%), Gaps = 38/293 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID + A + +L M + + PD V Y S+I G ++ + + + D M++
Sbjct: 651 VLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDE 710
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P++ +Y +L++ L + G D+A ++++M+ + TP T+ L+ L + + A
Sbjct: 711 GCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKA 770
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM-K 179
+++ + K G + V+YNIL++G CK GR+ A +L E+ D+ P+ ITY+TI+ +
Sbjct: 771 VQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQ 829
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
CC R G L A ++ + M+ G++
Sbjct: 830 CCRR------------------------------------GNLDGAIEFWDTMLNKGLKP 853
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
D ++YN LI C G+L A+ L D+M ++G + ++ TH L G + +I
Sbjct: 854 DTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGASRKFSI 906
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 123/272 (45%), Gaps = 11/272 (4%)
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
+K F+ L +++LI+ + R+ + I + + P T ++ + R+
Sbjct: 150 FEKCDFISSL-GFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRR 208
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
+ L + + G D + Y VI +F ++ +A + +++M + L++V YN
Sbjct: 209 VDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRM--ESSDLNVVVYNV 266
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
LI+ CK ++ A + + + ++G + T+ L+ GLCK + ++ M ++G
Sbjct: 267 LIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELG 326
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSAS 362
F A + +V+ L + GK+ A ++ ++ + F Y++++++LCK + A
Sbjct: 327 FVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAE 386
Query: 363 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
L + G+ A L S CRR
Sbjct: 387 LLFKEMGEKGL----CANDVTYSILIDSFCRR 414
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 122/293 (41%), Gaps = 30/293 (10%)
Query: 120 ALRMFRGLQKH-GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
ALR F L H F +++ ILI L A A +L+ L G + ++
Sbjct: 88 ALRFFNFLGLHKNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVFEALL 147
Query: 179 KCCFRNRKY--KLGLEIL-SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
C F + LG ++L + ++ FD V I RL + M Q+ T
Sbjct: 148 DC-FEKCDFISSLGFDLLIQSYVQEKRMFDS----------VLIFRLMRQCELMPQVRTL 196
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G ++N K +++ +L E+ G D Y + +I C+ N A
Sbjct: 197 G---------EVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKA 247
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 351
+ ++ M D N+ YN ++ L K+ ++ A+ + + K TY ++V
Sbjct: 248 KEMIQRME--SSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLG 305
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
LCK + + ++ ++ G ++A ++V+GLR G +A + ++++
Sbjct: 306 LCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVK 358
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 59/129 (45%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G+ + V+YN L+ G + + + LLDEM++ I PD +Y+++++ + G D A
Sbjct: 780 GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGA 839
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+ M+ L P T +N ++ G C A + + + G P T+ L G
Sbjct: 840 IEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHG 899
Query: 146 LCKAGRLRT 154
+ + T
Sbjct: 900 ASRKFSIST 908
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 200/407 (49%), Gaps = 8/407 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREA-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
++++ C+ Y +L MR+ ++PD+VTY+++I G + + + ++L EM+
Sbjct: 46 VVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVT 105
Query: 60 M-GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
GI PDV +Y S++ L + GK D A + ++M + P TF+ ++ G C R D
Sbjct: 106 RDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVD 165
Query: 119 NALRMFRG-LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
AL++++ L + P++VTY LI G CK+G L A +L + PN +TY+++
Sbjct: 166 EALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSL 225
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + L++ M KG + Y T+I ++ A M++M
Sbjct: 226 LHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCC 285
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
D VSYN L++ YC+ G++E A L EM + D+ T+T L+ G C A ++ AR
Sbjct: 286 PPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARF 345
Query: 298 HLEYM-NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
LE M G D ++ Y+ +V + + A + M + ++ TYSS++ L
Sbjct: 346 LLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGL 405
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
CKA R+ A ++L + + V +V+ L G EA K+
Sbjct: 406 CKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKL 452
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 201/397 (50%), Gaps = 7/397 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+I+ +C+ D IL M GI+PDVVTY S++ G R+ + + +++ EM
Sbjct: 83 VINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLK 142
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD-LTPCTATFNIMLNGLCKNRYTDN 119
G+ PD +++++L+ K DEA +++++++ P T+ +++G CK+ +
Sbjct: 143 GVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEK 202
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A++M ++ VP +VTY+ L+ GLCKAG L A + + + G PN +TYTT++
Sbjct: 203 AMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIH 262
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
K ++ M D Y ++ + ++GR++EA ++M T
Sbjct: 263 GLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLP 322
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ-GFECDKYTHTILIDGLCKAGNIKGARLH 298
D ++Y L+ +C +LE A LL+ M+ G + D T++I++ G +A A
Sbjct: 323 DRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEF 382
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDSF-TYSSMVHNLCK 354
++ M N Y+ ++D L K G++DHA+ V ++M V+ S T++S++ LC+
Sbjct: 383 IQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCR 442
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ A KLL++ G+ +++G +G
Sbjct: 443 LGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTG 479
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 190/384 (49%), Gaps = 12/384 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ + + +L M P+VVTY+SL+ G + L +LDL M G
Sbjct: 190 LIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKG 249
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +Y +L+H L K D A + +M P T ++N +L+G C+ + A
Sbjct: 250 CVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAK 309
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD-SGHAPNAITYTTIMKC 180
++F+ + +P+ +TY L++G C A RL AR++L+ + +G P+ +TY+ ++
Sbjct: 310 QLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAG 369
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R +++ E + M + + Y ++I K GR+ A + ++ MV V+
Sbjct: 370 YSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPS 429
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ ++N++I C+ G ++ A+ LL M G E T+T L++G + G ++ A E
Sbjct: 430 VGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFE 489
Query: 301 YMN----KIGFDSNL---EAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYS----SMV 349
M K +NL +A++ ++ L K +ID A+ V E + ++ ++V
Sbjct: 490 VMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIV 549
Query: 350 HNLCKAKRLPSASKLLLSCLKSGV 373
L +A R A KL+ S K G+
Sbjct: 550 DGLLRAGRTEEAGKLINSISKVGL 573
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 198/399 (49%), Gaps = 9/399 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE- 59
++ID +C+ +MRE ++P+ TYN ++ G + L S + ++L EM +
Sbjct: 12 IIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDG 70
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD-LTPCTATFNIMLNGLCKNRYTD 118
+ PD+ +Y+++++ + G+ D A + ++M+ D + P T+ +++GLC++ D
Sbjct: 71 KSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMD 130
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE-LGDSGHAPNAITYTTI 177
A M R ++ G P+ T++ LI G C A ++ A + KE L S P+ +TYT +
Sbjct: 131 RACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTAL 190
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ ++ + +++L M+ + + Y +++ K G L +A D +M + G
Sbjct: 191 IDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGC 250
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
++V+Y TLI+ C K++AA LL+DEM D ++ L+DG C+ G I+ A+
Sbjct: 251 VPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQ 310
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV-----KDSFTYSSMVHNL 352
+ M + Y C+V +++ A + E+M+ D TYS +V
Sbjct: 311 LFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGY 370
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+AKR A++ + + V +++DGL +G
Sbjct: 371 SRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAG 409
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 200/418 (47%), Gaps = 19/418 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNR-MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
LI +C D + + + PDVVTY +LI G ++ L ++ +L M
Sbjct: 154 LITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGR 213
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+V +Y+SL+H L + G D+A +F+ M P T+ +++GLC D A
Sbjct: 214 KCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAA 273
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + P+ V+YN L+ G C+ GR+ A+ + KE+ P+ ITYT +++
Sbjct: 274 RLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRG 333
Query: 181 CFRNRKYKLGLEILSAMKRK-GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + +L MK G D Y V+A + + R EA +++++M+ V
Sbjct: 334 FCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAP 393
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ V+Y++LI+ CK G+++ A +L M + E T +I LC+ G++ A L
Sbjct: 394 NAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLL 453
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----------TYSSM 348
M G + + Y +++ + G+++ A +FE M K +S++
Sbjct: 454 VAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSAL 513
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK---AVVDGLRHSGCRREAKKIQSKI 403
+ LCKA+ + A ++ L+S R + A++ A+VDGL +G EA K+ + I
Sbjct: 514 IRGLCKAREIDKAMAVVEE-LRS--RECEPAEEDCLAIVDGLLRAGRTEEAGKLINSI 568
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 153/308 (49%), Gaps = 8/308 (2%)
Query: 99 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 158
P T+ I+++G CK AL F +++ P TYN+++ GLCKA A +
Sbjct: 5 PTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEV 63
Query: 159 LKELGDSGH-APNAITYTTIMKCCFRNRKYKLGLEILSAM-KRKGYTFDGFGYCTVIAAF 216
LKE+ D AP+ +TY+T++ + + EIL M R G D Y +V+
Sbjct: 64 LKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGL 123
Query: 217 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE-MEKQGFECD 275
+ G++ A + + +M GV+ D +++ LI +C K++ A L E + ++ D
Sbjct: 124 CRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPD 183
Query: 276 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
T+T LIDG CK+GN++ A L M N+ Y+ ++ L K G +D A+++F
Sbjct: 184 VVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFR 243
Query: 336 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
M V + TY++++H LC A ++ +A L+ + + A++DG G
Sbjct: 244 RMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLG 303
Query: 392 CRREAKKI 399
EAK++
Sbjct: 304 RIEEAKQL 311
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ Y + F + M ++P+ VTY+SLI G + + ++++L M+
Sbjct: 365 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNK 424
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P V ++NS++ L +LG DEA ++ M L P T+ +L G + + A
Sbjct: 425 RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIA 484
Query: 121 LRMFRGLQ--------KHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
+F ++ VPE ++ LI+GLCKA + A +++EL
Sbjct: 485 YELFEVMRKKAKKSSSAANLVPEQ-AFSALIRGLCKAREIDKAMAVVEEL 533
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 84/172 (48%), Gaps = 7/172 (4%)
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG-NIKGAR 296
Q +V++ +I+ +CK +L+ A ++M ++ ++ T+ ++++GLCKA K
Sbjct: 4 QPTVVTWTIIIDGFCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSKAYE 62
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMVHN 351
+ E + +L Y+ +++ K G++D A + M +D TY+S+V
Sbjct: 63 VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
LC+ ++ A +++ GV K A++ G ++ EA K+ +I
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEI 174
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 193/406 (47%), Gaps = 39/406 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ F+ + +L +M E G +PD+ Y ++I G + L + ++L+ M G
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V YN+++ L + EA + +M D TFNI+++ C+N D +
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + HG +P+++TY +I G CK G + A +LK + G PN ++YT ++K
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK-- 434
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
G C+ GR +A + M QM+ G +
Sbjct: 435 --------------------------GLCSA-------GRWVDAEELMSQMIQQGCPPNP 461
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++NTLIN CK+G +E A LL +M G D +++ +IDGL KAG + A L
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G N Y+ I L ++G+++ I +F++++ D+ Y++++ +LCK
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWE 581
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A + +G +S ++ GL G +EA+++ S++
Sbjct: 582 TDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 183/377 (48%), Gaps = 4/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++A C+ F +L M G + D N ++ + ++ LL ++
Sbjct: 151 VILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF 210
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D+ SYN+++ L + + + +M+ D P TFN ++ LC+N +
Sbjct: 211 GCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERV 270
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + +HG P++ Y +I G+CK G L A IL + G PN + Y T++K
Sbjct: 271 HEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKG 330
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++K E+LS M +K D + ++ F + G + + +EQM++ G D
Sbjct: 331 LCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPD 390
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++Y T+IN +CKEG ++ A +LL M G + + ++TI++ GLC AG A +
Sbjct: 391 VITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMS 450
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
M + G N +N +++ L K G ++ AI + + M V D +YS+++ L KA
Sbjct: 451 QMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 510
Query: 357 RLPSASKLLLSCLKSGV 373
+ A +LL + G+
Sbjct: 511 KTEEALELLNVMVNKGI 527
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 171/350 (48%), Gaps = 4/350 (1%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
+ P+ T+ ++ G ++ +L++LDEM G P Y+ ++ + G +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
RV + M T T N++LN +C+ D A+ + R L G ++V+YN ++KGL
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C A R ++ E+ APN +T+ T++ RN ++ E+L+ M G T D
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T+I K G L+ A + + +M + G++ ++V YNT++ C + + A LL E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M ++ D T IL+D C+ G + LE M G ++ Y +++ K+G
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406
Query: 327 IDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
ID A+ + +SM ++ +Y+ ++ LC A R A +L+ ++ G
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 130/271 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D +CQ D +L +M G PDV+TY ++I G + L+ ++ LL M
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC 420
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ SY ++ L G+ +A + MI P TFN ++N LCK + A
Sbjct: 421 GCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQA 480
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + + +G P+L++Y+ +I GL KAG+ A +L + + G +PN I Y++I
Sbjct: 481 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACA 540
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + +++ +K D Y VI++ K A D+ MV++G +
Sbjct: 541 LSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPN 600
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+Y LI EG + A LL E+ +G
Sbjct: 601 ESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 137/374 (36%), Gaps = 106/374 (28%)
Query: 136 LVTYNILIKGLCKA--------------------------------GRLRTARWILKELG 163
+V YN ++ G C+A GR+ A +L E+
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
G AP Y I++ R+ ++ + +L AM KG T D V+ A + G +
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198
Query: 224 EATDYMEQMVTDGVQLDIVSY-----------------------------------NTLI 248
EA + ++ G + DIVSY NTLI
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
C+ G E + +L +M + G D + +IDG+CK G+++ A L M G
Sbjct: 259 GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLK 318
Query: 309 SNLEAYNCI-----------------------------------VDRLGKDGKIDHAINV 333
N+ YN + VD ++G +D I +
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378
Query: 334 FESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
E M + D TY+++++ CK + A LL S G + + V+ GL
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438
Query: 390 SGCRREAKKIQSKI 403
+G +A+++ S++
Sbjct: 439 AGRWVDAEELMSQM 452
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 193/406 (47%), Gaps = 39/406 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ F+ + +L +M E G +PD+ Y ++I G + L + ++L+ M G
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V YN+++ L + EA + +M D TFNI+++ C+N D +
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + HG +P+++TY +I G CK G + A +LK + G PN ++YT ++K
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK-- 434
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
G C+ GR +A + M QM+ G +
Sbjct: 435 --------------------------GLCSA-------GRWVDAEELMSQMIQQGCPPNP 461
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++NTLIN CK+G +E A LL +M G D +++ +IDGL KAG + A L
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G N Y+ I L ++G+++ I +F++++ D+ Y++++ +LCK
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWE 581
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A + +G +S ++ GL G +EA+++ S++
Sbjct: 582 TDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 183/377 (48%), Gaps = 4/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++A C+ F +L M G + D N ++ + ++ LL ++
Sbjct: 151 VILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF 210
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D+ SYN+++ L + + + +M+ D P TFN ++ LC+N +
Sbjct: 211 GCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERV 270
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + +HG P++ Y +I G+CK G L A IL + G PN + Y T++K
Sbjct: 271 HEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKG 330
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++K E+LS M +K D + ++ F + G + + +EQM++ G D
Sbjct: 331 LCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPD 390
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++Y T+IN +CKEG ++ A +LL M G + + ++TI++ GLC AG A +
Sbjct: 391 VITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMS 450
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
M + G N +N +++ L K G ++ AI + + M V D +YS+++ L KA
Sbjct: 451 QMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 510
Query: 357 RLPSASKLLLSCLKSGV 373
+ A +LL + G+
Sbjct: 511 KTEEALELLNVMVNKGI 527
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 171/350 (48%), Gaps = 4/350 (1%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
+ P+ T+ ++ G ++ +L++LDEM G P Y+ ++ + G +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
RV + M T T N++LN +C+ D A+ + R L G ++V+YN ++KGL
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C A R ++ E+ APN +T+ T++ RN ++ E+L+ M G T D
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T+I K G L+ A + + +M + G++ ++V YNT++ C + + A LL E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M ++ D T IL+D C+ G + LE M G ++ Y +++ K+G
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406
Query: 327 IDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
ID A+ + +SM ++ +Y+ ++ LC A R A +L+ ++ G
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 130/271 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D +CQ D +L +M G PDV+TY ++I G + L+ ++ LL M
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC 420
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ SY ++ L G+ +A + MI P TFN ++N LCK + A
Sbjct: 421 GCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQA 480
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + + +G P+L++Y+ +I GL KAG+ A +L + + G +PN I Y++I
Sbjct: 481 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACA 540
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + +++ +K D Y VI++ K A D+ MV++G +
Sbjct: 541 LSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPN 600
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+Y LI EG + A LL E+ +G
Sbjct: 601 ESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 137/374 (36%), Gaps = 106/374 (28%)
Query: 136 LVTYNILIKGLCKA--------------------------------GRLRTARWILKELG 163
+V YN ++ G C+A GR+ A +L E+
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
G AP Y I++ R+ ++ + +L AM KG T D V+ A + G +
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198
Query: 224 EATDYMEQMVTDGVQLDIVSY-----------------------------------NTLI 248
EA + ++ G + DIVSY NTLI
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
C+ G E + +L +M + G D + +IDG+CK G+++ A L M G
Sbjct: 259 GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLK 318
Query: 309 SNLEAYNCI-----------------------------------VDRLGKDGKIDHAINV 333
N+ YN + VD ++G +D I +
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378
Query: 334 FESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
E M + D TY+++++ CK + A LL S G + + V+ GL
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438
Query: 390 SGCRREAKKIQSKI 403
+G +A+++ S++
Sbjct: 439 AGRWVDAEELMSQM 452
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 185/365 (50%), Gaps = 6/365 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANR 87
P+ VTYN++IAG + +LD++ EM E G I P+ ++Y +++ ++G+ DEA +
Sbjct: 512 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 571
Query: 88 VFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
VF +M+ G++ P +N ++ G C D AL + + G + TYN+L+ L
Sbjct: 572 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 631
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
GR A +++E+G G AP+ TY ++ + K LEI M R+G
Sbjct: 632 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 691
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I A K G+++E ++ V G++ D+V YN LIN + G ++ A+ ++ E
Sbjct: 692 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 751
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
MEK+ D T+ L+ GLC G + AR ++ M + G +L YN ++ G
Sbjct: 752 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGD 811
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+ A+ + M K TY++++ LCK + A ++ +++G+ S +
Sbjct: 812 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 871
Query: 383 VVDGL 387
+++GL
Sbjct: 872 LIEGL 876
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 156/321 (48%), Gaps = 1/321 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+I +C+ D + + M G + P+ V YN+LI G L +L D M+E
Sbjct: 556 VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVER 615
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ V +YN L+H LF G+ EA + ++M L P T+NI++NG CK A
Sbjct: 616 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 675
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F + + G +VTY LI L K G+++ + E G P+ + Y ++
Sbjct: 676 LEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 735
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ EI+ M++K D Y T++ +GR+ EA +++M G+Q D
Sbjct: 736 HSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPD 795
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YNTLI+ Y +G ++ A + +EM +GF T+ LI GLCK G A ++
Sbjct: 796 LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK 855
Query: 301 YMNKIGFDSNLEAYNCIVDRL 321
M + G + Y +++ L
Sbjct: 856 EMVENGITPDDSTYISLIEGL 876
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 174/358 (48%), Gaps = 8/358 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMRE-AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+I +C A I+ MRE GI+P+ TY ++I+G + + ++ + DEML
Sbjct: 520 VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTK 579
Query: 61 G-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G + P+ YN+L+ GK D A M+ + AT+N++++ L +
Sbjct: 580 GEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE 639
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + + G P++ TYNILI G CK G ++ A I + + G +TYT ++
Sbjct: 640 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIY 699
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + + ++ R+G D Y +I + G + A + M +M +
Sbjct: 700 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 759
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLH 298
D V+YNTL+ C G+++ A L+DEM ++G + D T+ LI G G++K A R+
Sbjct: 760 DDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIR 819
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNL 352
E MNK GF+ L YN ++ L K+G+ D A N+ + M D TY S++ L
Sbjct: 820 NEMMNK-GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 876
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 178/397 (44%), Gaps = 49/397 (12%)
Query: 48 SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 107
+ SL L M + +P S + L+ L A +F DM L CT TFNIM
Sbjct: 434 ATSLRLYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIM 489
Query: 108 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 167
L LC AL + R + + P VTYN +I G C GR++ A I++E+ + G
Sbjct: 490 LRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGG 545
Query: 168 -APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT-FDGFGYCTVIAAFVKIGRLKEA 225
APN TY T++ + + +++ M KG + Y +I + G+L A
Sbjct: 546 IAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTA 605
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
Y ++MV GV + + +YN L++ +G+ AY L++EM +G D +T+ ILI+G
Sbjct: 606 LLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILING 665
Query: 286 LCKAGNIKGARLHLEYMNKIG---------------------------FD--------SN 310
CK GN+K A E M++ G FD +
Sbjct: 666 HCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPD 725
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
L YN +++ G ID A + ME K D TY++++ LC R+ A KL+
Sbjct: 726 LVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID 785
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ G++ ++ G G ++A +I++++
Sbjct: 786 EMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 822
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 145/280 (51%), Gaps = 12/280 (4%)
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILS 195
T+NI+++ LC AG+ A +L+++ PNA+TY T++ C R R + L+I+
Sbjct: 484 TTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGR-VQAALDIMR 538
Query: 196 AMK-RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG-VQLDIVSYNTLINLYCK 253
M+ R G + + Y TVI+ + K+GR+ EA ++M+T G V+ + V YN LI YC
Sbjct: 539 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 598
Query: 254 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
+GKL+ A L D M ++G T+ +L+ L G A +E M G ++
Sbjct: 599 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 658
Query: 314 YNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 369
YN +++ K+G + A+ +FE+M + TY+++++ L K ++ KL +
Sbjct: 659 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 718
Query: 370 KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+ G+R A+++ SG A +I ++ +I+
Sbjct: 719 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 758
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ + I M G+ VVTY +LI ++ + + L DE +
Sbjct: 661 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 720
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD+ YN+L++ G D A + +M + P T+N ++ GLC D A
Sbjct: 721 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 780
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + + G P+LVTYN LI G G ++ A I E+ + G P +TY +++
Sbjct: 781 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 840
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 217
+N + ++ M G T D Y ++I
Sbjct: 841 LCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 877
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 185/365 (50%), Gaps = 6/365 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANR 87
P+ VTYN++IAG + +LD++ EM E G I P+ ++Y +++ ++G+ DEA +
Sbjct: 517 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 576
Query: 88 VFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
VF +M+ G++ P +N ++ G C D AL + + G + TYN+L+ L
Sbjct: 577 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 636
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
GR A +++E+G G AP+ TY ++ + K LEI M R+G
Sbjct: 637 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 696
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I A K G+++E ++ V G++ D+V YN LIN + G ++ A+ ++ E
Sbjct: 697 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 756
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
MEK+ D T+ L+ GLC G + AR ++ M + G +L YN ++ G
Sbjct: 757 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGD 816
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+ A+ + M K TY++++ LCK + A ++ +++G+ S +
Sbjct: 817 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 876
Query: 383 VVDGL 387
+++GL
Sbjct: 877 LIEGL 881
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 156/321 (48%), Gaps = 1/321 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+I +C+ D + + M G + P+ V YN+LI G L +L D M+E
Sbjct: 561 VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVER 620
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ V +YN L+H LF G+ EA + ++M L P T+NI++NG CK A
Sbjct: 621 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 680
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F + + G +VTY LI L K G+++ + E G P+ + Y ++
Sbjct: 681 LEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 740
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ EI+ M++K D Y T++ +GR+ EA +++M G+Q D
Sbjct: 741 HSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPD 800
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YNTLI+ Y +G ++ A + +EM +GF T+ LI GLCK G A ++
Sbjct: 801 LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK 860
Query: 301 YMNKIGFDSNLEAYNCIVDRL 321
M + G + Y +++ L
Sbjct: 861 EMVENGITPDDSTYISLIEGL 881
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 174/358 (48%), Gaps = 8/358 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMRE-AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+I +C A I+ MRE GI+P+ TY ++I+G + + ++ + DEML
Sbjct: 525 VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTK 584
Query: 61 G-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G + P+ YN+L+ GK D A M+ + AT+N++++ L +
Sbjct: 585 GEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE 644
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + + G P++ TYNILI G CK G ++ A I + + G +TYT ++
Sbjct: 645 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIY 704
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + + ++ R+G D Y +I + G + A + M +M +
Sbjct: 705 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 764
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLH 298
D V+YNTL+ C G+++ A L+DEM ++G + D T+ LI G G++K A R+
Sbjct: 765 DDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIR 824
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNL 352
E MNK GF+ L YN ++ L K+G+ D A N+ + M D TY S++ L
Sbjct: 825 NEMMNK-GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 881
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 178/397 (44%), Gaps = 49/397 (12%)
Query: 48 SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 107
+ SL L M + +P S + L+ L A +F DM L CT TFNIM
Sbjct: 439 ATSLRLYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIM 494
Query: 108 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 167
L LC AL + R + + P VTYN +I G C GR++ A I++E+ + G
Sbjct: 495 LRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGG 550
Query: 168 -APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT-FDGFGYCTVIAAFVKIGRLKEA 225
APN TY T++ + + +++ M KG + Y +I + G+L A
Sbjct: 551 IAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTA 610
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
Y ++MV GV + + +YN L++ +G+ AY L++EM +G D +T+ ILI+G
Sbjct: 611 LLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILING 670
Query: 286 LCKAGNIKGARLHLEYMNKIG---------------------------FD--------SN 310
CK GN+K A E M++ G FD +
Sbjct: 671 HCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPD 730
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
L YN +++ G ID A + ME K D TY++++ LC R+ A KL+
Sbjct: 731 LVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID 790
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ G++ ++ G G ++A +I++++
Sbjct: 791 EMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 827
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 164/330 (49%), Gaps = 16/330 (4%)
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
R++ M L TA+ + +L+ L + A +F + + T+NI+++ L
Sbjct: 443 RLYSRMKSLSLPISTASLHPLLSALP----SAPAFALFADMFRLRLPLCTTTFNIMLRHL 498
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMK-RKGYTF 204
C AG+ A +L+++ PNA+TY T++ C R R + L+I+ M+ R G
Sbjct: 499 CSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGR-VQAALDIMREMRERGGIAP 553
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG-VQLDIVSYNTLINLYCKEGKLEAAYLL 263
+ + Y TVI+ + K+GR+ EA ++M+T G V+ + V YN LI YC +GKL+ A L
Sbjct: 554 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 613
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
D M ++G T+ +L+ L G A +E M G ++ YN +++ K
Sbjct: 614 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCK 673
Query: 324 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
+G + A+ +FE+M + TY+++++ L K ++ KL ++ G+R
Sbjct: 674 EGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 733
Query: 380 QKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
A+++ SG A +I ++ +I+
Sbjct: 734 YNALINSHSTSGNIDRAFEIMGEMEKKRIA 763
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ + I M G+ VVTY +LI ++ + + L DE +
Sbjct: 666 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 725
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD+ YN+L++ G D A + +M + P T+N ++ GLC D A
Sbjct: 726 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 785
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + + G P+LVTYN LI G G ++ A I E+ + G P +TY +++
Sbjct: 786 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 845
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 217
+N + ++ M G T D Y ++I
Sbjct: 846 LCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 882
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 193/406 (47%), Gaps = 39/406 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ F+ + +L +M E G +PD+ Y ++I G + L + ++L+ M G
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V YN+++ L + EA + +M D TFNI+++ C+N D +
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + HG +P+++TY +I G CK G + A +LK + G PN ++YT ++K
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK-- 434
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
G C+ GR +A + M QM+ G +
Sbjct: 435 --------------------------GLCSA-------GRWVDAEELMSQMIQQGCPPNP 461
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++NTLIN CK+G +E A LL +M G D +++ +IDGL KAG + A L
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G N Y+ I L ++G+++ I +F++++ D+ Y++++ +LCK
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWE 581
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A + +G +S ++ GL G +EA+++ S++
Sbjct: 582 TDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 183/377 (48%), Gaps = 4/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++A C+ F +L M G + D N ++ + ++ LL ++
Sbjct: 151 VILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF 210
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D+ SYN+++ L + + + +M+ D P TFN ++ LC+N +
Sbjct: 211 GCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERV 270
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + +HG P++ Y +I G+CK G L A IL + G PN + Y T++K
Sbjct: 271 HEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKG 330
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++K E+LS M +K D + ++ F + G + + +EQM++ G D
Sbjct: 331 LCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPD 390
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++Y T+IN +CKEG ++ A +LL M G + + ++TI++ GLC AG A +
Sbjct: 391 VITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMS 450
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
M + G N +N +++ L K G ++ AI + + M V D +YS+++ L KA
Sbjct: 451 QMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 510
Query: 357 RLPSASKLLLSCLKSGV 373
+ A +LL + G+
Sbjct: 511 KTEEALELLNVMVNKGI 527
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 171/350 (48%), Gaps = 4/350 (1%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
+ P+ T+ ++ G ++ +L++LDEM G P Y+ ++ + G +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
RV + M T T N++LN +C+ D A+ + R L G ++V+YN ++KGL
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C A R ++ E+ APN +T+ T++ RN ++ E+L+ M G T D
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T+I K G L+ A + + +M + G++ ++V YNT++ C + + A LL E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M ++ D T IL+D C+ G + LE M G ++ Y +++ K+G
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406
Query: 327 IDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
ID A+ + +SM ++ +Y+ ++ LC A R A +L+ ++ G
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 130/271 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D +CQ D +L +M G PDV+TY ++I G + L+ ++ LL M
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC 420
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ SY ++ L G+ +A + MI P TFN ++N LCK + A
Sbjct: 421 GCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQA 480
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + + +G P+L++Y+ +I GL KAG+ A +L + + G +PN I Y++I
Sbjct: 481 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACA 540
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + +++ +K D Y VI++ K A D+ MV++G +
Sbjct: 541 LSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPN 600
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+Y LI EG + A LL E+ +G
Sbjct: 601 ESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 137/374 (36%), Gaps = 106/374 (28%)
Query: 136 LVTYNILIKGLCKA--------------------------------GRLRTARWILKELG 163
+V YN ++ G C+A GR+ A +L E+
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
G AP Y I++ R+ ++ + +L AM KG T D V+ A + G +
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198
Query: 224 EATDYMEQMVTDGVQLDIVSY-----------------------------------NTLI 248
EA + ++ G + DIVSY NTLI
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
C+ G E + +L +M + G D + +IDG+CK G+++ A L M G
Sbjct: 259 GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLK 318
Query: 309 SNLEAYNCI-----------------------------------VDRLGKDGKIDHAINV 333
N+ YN + VD ++G +D I +
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378
Query: 334 FESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
E M + D TY+++++ CK + A LL S G + + V+ GL
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438
Query: 390 SGCRREAKKIQSKI 403
+G +A+++ S++
Sbjct: 439 AGRWVDAEELMSQM 452
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 191/392 (48%), Gaps = 4/392 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
D Y + + M + G+SP+ +TYN L+ G + ++ + +M G+ PDV +YN+
Sbjct: 222 LDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNT 281
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM L + G+ EA +VF M+ P ++ + +L+G Y ++ + ++G
Sbjct: 282 LMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNG 341
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
P+ +NILI K G + A ++ G PN +TY T+M R K +
Sbjct: 342 TQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAM 401
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+ +G T +G + T+I + +A + +M+ G+ + + +NTL+N
Sbjct: 402 SQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHL 461
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
CKEG + A + D M + +CD T+T LIDG C G + A LE M G N
Sbjct: 462 CKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNE 521
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLS 367
YN I++ K+G+I+ A ++F M K YS+++H L + +R+ +A +L L
Sbjct: 522 VTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLW 581
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+K G+++ ++ GL + C +A ++
Sbjct: 582 MIKCGIKLPIGTYNIILQGLCQNNCTDDALRM 613
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 163/360 (45%), Gaps = 4/360 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + M + G PD Y +L+ G L LLD M+ G PD + +N L+
Sbjct: 298 VFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYA 357
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G DEA F M L P T+ +++ LC+ D+A+ F L G P V
Sbjct: 358 KHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGV 417
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
+ LI GLC + A + E+ G PN I + T++ + I M
Sbjct: 418 VFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLM 477
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
R D Y T+I + G++ EAT +E MV DGV+ + V+YNT+IN YCK G++
Sbjct: 478 VRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRI 537
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
E A L +M +G ++ ++ GL + I A+ +M K G + YN I
Sbjct: 538 EDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNII 597
Query: 318 VDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ L ++ D A+ +F ++ + D + T++ M+ L K R A L S L G+
Sbjct: 598 LQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGL 657
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 162/383 (42%), Gaps = 49/383 (12%)
Query: 35 NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 94
NS ++ R S + +L L + M D+ +Y+ ++ C + G D A +I
Sbjct: 70 NSALSAVARESP-AVALSLFNRMPR----ADLCTYSIVIGCCSRAGHLDLAFAALGRVIR 124
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRM-FRGLQKHGFVPELVTYNILIKGLC------ 147
T TF+ +L GLC ++ T +A+ + R + G P +YNIL+KGLC
Sbjct: 125 TGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQ 184
Query: 148 ---------------------------------KAGRLRTARWILKELGDSGHAPNAITY 174
+ G+L A + E+ D G +PN ITY
Sbjct: 185 QALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITY 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
++ + K K + I M R G D Y T++ K GR EA + MV
Sbjct: 245 NCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVK 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G + D Y TL++ Y EG L + LLD M + G + D Y ILI K G +
Sbjct: 305 KGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDE 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVH 350
A L M + G N+ Y ++D L + GK+D A++ F+ + + + +++H
Sbjct: 365 AMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIH 424
Query: 351 NLCKAKRLPSASKLLLSCLKSGV 373
LC + A +L + + G+
Sbjct: 425 GLCACDKWDKAEELAVEMIGRGI 447
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 179/407 (43%), Gaps = 39/407 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI AY + D ++MR+ G+ P++VTY +++ R + ++ D ++
Sbjct: 351 ILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISE 410
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ + +L+H L K D+A + +MI + P T FN +LN LCK A
Sbjct: 411 GLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRA 470
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + + +++TY LI G C G++ A +L+ + G PN +TY TI+
Sbjct: 471 KNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIIN- 529
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
GYC K GR+++A QM + GV
Sbjct: 530 ---------------------------GYC-------KNGRIEDACSLFRQMASKGVNPG 555
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV Y+T+++ + ++ AA L M K G + T+ I++ GLC+ A
Sbjct: 556 IVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFH 615
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
+ I F +N ++D L K G+ D A ++F S+ V + TY M+ +L +
Sbjct: 616 NLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQG 675
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L L LS K+G A+V L G R+A SKI
Sbjct: 676 LLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKI 722
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 125/250 (50%), Gaps = 2/250 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC D +L M G+ P+ VTYN++I G +N + + L +M G
Sbjct: 492 LIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKG 551
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P + Y++++H LFQ + A ++ MI CG P T+NI+L GLC+N TD+A
Sbjct: 552 VNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLP-IGTYNIILQGLCQNNCTDDA 610
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
LRMF L F + T+NI+I L K GR A+ + L G PN +TY +MK
Sbjct: 611 LRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKS 670
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ ++++ G T D ++ + G +++A Y+ ++ + L+
Sbjct: 671 LIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNFSLE 730
Query: 241 IVSYNTLINL 250
+ +L+ L
Sbjct: 731 ASTAESLVFL 740
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 156/366 (42%), Gaps = 36/366 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++DA C+ D + +R+ G++P+ V + +LI G + +L EM+ G
Sbjct: 387 VMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRG 446
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+ +N+L++ L + G A +F M+ D+ T+ +++G C + D A
Sbjct: 447 ICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEAT 506
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ G+ G P VTYN +I G CK GR+ A + +++ G P + Y+TI+
Sbjct: 507 KLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGL 566
Query: 182 FRNRKYKLGLEILSAMKRKG-------YTFDGFGYCT----------------------- 211
F+ R+ E+ M + G Y G C
Sbjct: 567 FQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQN 626
Query: 212 -----VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+I A +K GR EA D ++ G+ ++V+Y ++ ++G LE L
Sbjct: 627 RTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLS 686
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
+EK G D L+ L + G ++ A ++L +++ F +V L GK
Sbjct: 687 LEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNFSLEASTAESLV-FLVSSGK 745
Query: 327 IDHAIN 332
D IN
Sbjct: 746 YDQHIN 751
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 95/228 (41%), Gaps = 9/228 (3%)
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY-MEQ 231
TY+ ++ CC R L L + R G+T + ++ R +A D + +
Sbjct: 98 TYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRR 157
Query: 232 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM----EKQGFECDKYTHTILIDGLC 287
M G + SYN L+ C E + + A LL M + G D ++T +I+GL
Sbjct: 158 MPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLL 217
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSF 343
+ G + A + M G N YNC++ GK AI +F M D
Sbjct: 218 REGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVV 277
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
TY++++ LCK R A K+ S +K G + S ++ G G
Sbjct: 278 TYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEG 325
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 185/375 (49%), Gaps = 3/375 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ A ++ + M G+ P+VV Y SLI+G + L + L EM G
Sbjct: 431 LISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKG 490
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+ +++ +L+ L + EAN++F +M+ ++ P T+N+++ G CK T A
Sbjct: 491 ISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAF 550
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G VP+ TY LI GLC GR+ AR + +L N + ++ ++
Sbjct: 551 ELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGY 610
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + L+ M +G D Y +I ++ + D ++QM G++ D
Sbjct: 611 CKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDN 670
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V Y T+I+ K G L+ A+ L D M +G + T+T LI+GLCK G + A L
Sbjct: 671 VLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCRE 730
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYSSMVHNLCKAKRL 358
M N Y C +D L +G I+ AI + + + + ++ TY+ ++ CK R+
Sbjct: 731 MLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRI 790
Query: 359 PSASKLLLSCLKSGV 373
A+++L++ + SG+
Sbjct: 791 QEAAEVLVNMIDSGI 805
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 188/380 (49%), Gaps = 10/380 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ F+AG ++N M E G P ++L+ G + + + DL++++ + G
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P ++ YN+L++ + + GK DEA +F +M L P T++I+++ CK D AL
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G + Y+ LI G CK G+LR A+ + E+ +G PN + YT+++
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + M KG + + + + +I+ R+ EA +MV V +
Sbjct: 471 CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNE 530
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN LI +CKEG A+ LLDEM ++G D YT+ LI GLC G + AR E+
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR---EF 587
Query: 302 MNKIGFDS---NLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCK 354
MN + + N ++ ++ K+G++D A++ M D YS +++ + +
Sbjct: 588 MNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILR 647
Query: 355 AKRLPSASKLLLSCLKSGVR 374
+ S LL G+R
Sbjct: 648 QQDRRSIIDLLKQMHDQGLR 667
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 178/368 (48%), Gaps = 4/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ + C+ F ++ RM +G V TYN I G +N + ++++ + + G
Sbjct: 221 VVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKG 280
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ DV +Y +L+ L ++ + + + +MI P A + +++GL K +A
Sbjct: 281 LRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAF 340
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++K G P L YN LI +CK G+L A + +G G PN +TY+ ++
Sbjct: 341 DLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSF 400
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + L L M G + Y ++I+ K+G+L+ A ++M+ +G++ ++
Sbjct: 401 CKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNV 460
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V Y +LI+ YCKEG+L A+ L EM +G + YT T LI GLC A + A
Sbjct: 461 VIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGE 520
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M + N YN +++ K+G A + + M V D++TY ++ LC R
Sbjct: 521 MVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGR 580
Query: 358 LPSASKLL 365
+ A + +
Sbjct: 581 VSEAREFM 588
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 192/405 (47%), Gaps = 8/405 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI++ C+ D ++ N M G+ P+ VTY+ LI + L +L L +M E+G
Sbjct: 361 LINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVG 420
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
I V+ Y+SL+ HC +LGK A +F +MI L P + +++G CK N
Sbjct: 421 IKATVYPYSSLISGHC--KLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHN 478
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A R++ + G P T+ LI GLC A R+ A + E+ + PN +TY +++
Sbjct: 479 AFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIE 538
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ E+L M KG D + Y +I+ GR+ EA ++M + + +L
Sbjct: 539 GHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKL 598
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ + ++ L++ YCKEG+L+ A EM +G D +++LI G+ + + + L
Sbjct: 599 NEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLL 658
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
+ M+ G + Y ++D K G + A +++ M + + TY+++++ LCK
Sbjct: 659 KQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKI 718
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 400
+ A L L S ++ +D L G +A ++
Sbjct: 719 GLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLH 763
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 172/399 (43%), Gaps = 38/399 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + M E + P+ VTYN LI G + + +LLDEM+E G
Sbjct: 501 LISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKG 560
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD ++Y L+ L G+ EA D+ F+ +L+G CK D+AL
Sbjct: 561 LVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDAL 620
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R + G +LV Y++LI G+ + R+ +LK++ D G P+ + YTT++
Sbjct: 621 DACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDAN 680
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT--------------- 226
+ K+ + M +G + Y +I KIG + +A
Sbjct: 681 AKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQ 740
Query: 227 -------DYM--EQMVTDGVQL----------DIVSYNTLINLYCKEGKLEAAYLLLDEM 267
DY+ E + +QL + V+YN LI +CK G+++ A +L M
Sbjct: 741 NTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNM 800
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
G D +++ +I C+ G++K A E M G + + AYN ++ G++
Sbjct: 801 IDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGEL 860
Query: 328 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 362
A + + M + + TY+S++H C + S +
Sbjct: 861 TKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTA 899
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 172/403 (42%), Gaps = 39/403 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI Y Q G ++ M + GI P + T + ++ G R +L L DE++
Sbjct: 150 LLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSS 209
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV+ Y + ++ LC+ + A
Sbjct: 210 GLRPDVYVYTA-----------------------------------VVRSLCELKDFIRA 234
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++ G + TYN+ I+GLCK R+ A I L G + TY T++
Sbjct: 235 REVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLG 294
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ +++ G E+++ M G+ ++ K G + A D + ++ GV
Sbjct: 295 LCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPS 354
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ YN LIN CK+GKL+ A L + M +G + T++ILID CK G + A L
Sbjct: 355 LFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLG 414
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M ++G + + Y+ ++ K GK+ A ++F+ M + Y+S++ CK
Sbjct: 415 KMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEG 474
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L +A +L G+ A++ GL H+ EA K+
Sbjct: 475 ELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKL 517
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 148/353 (41%), Gaps = 36/353 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGAT------------------ 42
+LI+ +C+ + + +L+ M E G+ PD TY LI+G
Sbjct: 535 VLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGE 594
Query: 43 -----------------RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
+ L +LD EML G+ D+ Y+ L++ + +
Sbjct: 595 QQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSI 654
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+ + M L P + M++ K A ++ + G +P +VTY LI G
Sbjct: 655 IDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALING 714
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCK G + A + +E+ S PN TY + + +++ + +G+ +
Sbjct: 715 LCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVL-LEGFLAN 773
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y +I F K+GR++EA + + M+ G+ D +SY+T+I YC+ G L+ A L +
Sbjct: 774 TVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWE 833
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
M +G D + LI G C G + A + M + G N YN ++
Sbjct: 834 SMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLI 886
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 144/303 (47%), Gaps = 4/303 (1%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
T F++++ +NR + L + R + G +P++ T + ++ GL + + R A +
Sbjct: 145 TLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFD 204
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
E+ SG P+ YT +++ + + E++ M+ G Y I K
Sbjct: 205 EIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQ 264
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
R+ EA + + G++ D+ +Y TL+ CK + EA +++EM + GF + +
Sbjct: 265 RVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVS 324
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
L+DGL K GNI A + + K G +L YN +++ + KDGK+D A ++F +M K
Sbjct: 325 NLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHK 384
Query: 341 DSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
F TYS ++ + CK +L A L + G++ +++ G G R A
Sbjct: 385 GLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAA 444
Query: 397 KKI 399
K +
Sbjct: 445 KSL 447
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 60/112 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C+ +L M ++GISPD ++Y+++I R L ++ L + ML
Sbjct: 779 ILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNR 838
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 112
G+ PD +YN L++ G+ +A + DM+ + P AT+N +++G C
Sbjct: 839 GVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 4/202 (1%)
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
G+ +I +V+ R + + M+ G+ I + + ++N + + A L DE
Sbjct: 146 LGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDE 205
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
+ G D Y +T ++ LC+ + AR + M G D ++ YN + L K+ +
Sbjct: 206 IVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQR 265
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+ A+ + + K D TY ++V LCK + + +++ ++ G ++A
Sbjct: 266 VWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSN 325
Query: 383 VVDGLRHSGCRREAKKIQSKIR 404
+VDGLR G A + +K++
Sbjct: 326 LVDGLRKKGNIGSAFDLVNKVK 347
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 193/406 (47%), Gaps = 39/406 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ F+ + +L +M E G +PD+ Y ++I G + L + ++L+ M G
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V YN+++ L + EA + +M D TFNI+++ C+N D +
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + HG +P+++TY +I G CK G + A +LK + G PN ++YT ++K
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK-- 434
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
G C+ GR +A + M QM+ G +
Sbjct: 435 --------------------------GLCSA-------GRWVDAEELMSQMIQQGCPPNP 461
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++NTLIN CK+G +E A LL +M G D +++ +IDGL KAG + A L
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G N Y+ I L ++G+++ I +F++++ D+ Y++++ +LCK
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWE 581
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A + +G +S ++ GL G +EA+++ S++
Sbjct: 582 TDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 183/377 (48%), Gaps = 4/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++A C+ F +L M G + D N ++ + ++ LL ++
Sbjct: 151 VILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF 210
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D+ SYN+++ L + + + +M+ D P TFN ++ LC+N +
Sbjct: 211 GCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERV 270
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + +HG P++ Y +I G+CK G L A IL + G PN + Y T++K
Sbjct: 271 HEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKG 330
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++K E+LS M +K D + ++ F + G + + +EQM++ G D
Sbjct: 331 LCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPD 390
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++Y T+IN +CKEG ++ A +LL M G + + ++TI++ GLC AG A +
Sbjct: 391 VITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMS 450
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
M + G N +N +++ L K G ++ AI + + M V D +YS+++ L KA
Sbjct: 451 QMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 510
Query: 357 RLPSASKLLLSCLKSGV 373
+ A +LL + G+
Sbjct: 511 KTEEALELLNVMVNKGI 527
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 171/350 (48%), Gaps = 4/350 (1%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
+ P+ T+ ++ G ++ +L++LDEM G P Y+ ++ + G +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
RV + M T T N++LN +C+ D A+ + R L G ++V+YN ++KGL
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C A R ++ E+ APN +T+ T++ RN ++ E+L+ M G T D
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T+I K G L+ A + + +M + G++ ++V YNT++ C + + A LL E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M ++ D T IL+D C+ G + LE M G ++ Y +++ K+G
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406
Query: 327 IDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
ID A+ + +SM ++ +Y+ ++ LC A R A +L+ ++ G
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 130/271 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D +CQ D +L +M G PDV+TY ++I G + L+ ++ LL M
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC 420
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ SY ++ L G+ +A + MI P TFN ++N LCK + A
Sbjct: 421 GCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQA 480
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + + +G P+L++Y+ +I GL KAG+ A +L + + G +PN I Y++I
Sbjct: 481 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACA 540
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + +++ +K D Y VI++ K A D+ MV++G +
Sbjct: 541 LSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPN 600
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+Y LI EG + A LL E+ +G
Sbjct: 601 ESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 137/374 (36%), Gaps = 106/374 (28%)
Query: 136 LVTYNILIKGLCKA--------------------------------GRLRTARWILKELG 163
+V YN ++ G C+A GR+ A +L E+
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
G AP Y I++ R+ ++ + +L AM KG T D V+ A + G +
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198
Query: 224 EATDYMEQMVTDGVQLDIVSY-----------------------------------NTLI 248
EA + ++ G + DIVSY NTLI
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
C+ G E + +L +M + G D + +IDG+CK G+++ A L M G
Sbjct: 259 GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLK 318
Query: 309 SNLEAYNCI-----------------------------------VDRLGKDGKIDHAINV 333
N+ YN + VD ++G +D I +
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378
Query: 334 FESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
E M + D TY+++++ CK + A LL S G + + V+ GL
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438
Query: 390 SGCRREAKKIQSKI 403
+G +A+++ S++
Sbjct: 439 AGRWVDAEELMSQM 452
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 187/379 (49%), Gaps = 4/379 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ +L + + P+VV YN++I G ++ L++ + DL EM G
Sbjct: 121 LLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD +Y +L++ LG+ A + +MI ++ P +NI++N LCK A
Sbjct: 181 IFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAK 240
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K G P +VTY+ L+ G C G ++ A+ I + G PN +Y ++
Sbjct: 241 NLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGL 300
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ + +L M K D Y ++I K GR+ A + M +M G D+
Sbjct: 301 CKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADV 360
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y +L++ CK L+ A L +M+++G + YT+T LIDGLCK G +K A+ ++
Sbjct: 361 VTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQH 420
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G ++ Y ++ L K+G D A+ + ME + ++ T+ ++ +L +
Sbjct: 421 LLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDE 480
Query: 358 LPSASKLLLSCLKSGVRIL 376
A KLL + G+ +L
Sbjct: 481 NDKAEKLLHEMIAKGLLVL 499
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 196/408 (48%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C +++L ++ + G PD +T N+L+ G + SL D+++
Sbjct: 50 ILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQ 109
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D SY +L++ L ++G+ A ++ + + P +N +++GLCK++ + A
Sbjct: 110 GFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEA 169
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G P+ +TY LI G C G+L A +L E+ P Y ++
Sbjct: 170 YDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINA 229
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K +L+ M ++G Y T++ + +G ++ A MV GV +
Sbjct: 230 LCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPN 289
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ SYN +IN CK +++ A LL EM + D T+ LIDGLCK+G I A +
Sbjct: 290 VYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMN 349
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M+ G +++ Y ++D L K+ +D A +F M+ + +TY++++ LCK
Sbjct: 350 EMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGG 409
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
RL +A +L L G I ++ GL G EA I+SK+
Sbjct: 410 RLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKME 457
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 170/342 (49%), Gaps = 4/342 (1%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
+P ++ +N ++ + ++ L +M GI + + N L++C LG+ +
Sbjct: 7 TPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
V ++ P T T N ++ GLC +L + GF + V+Y L+ GLC
Sbjct: 67 VLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K G R A +L+ + D PN + Y TI+ +++ ++ S M +G D
Sbjct: 127 KIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI 186
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y T+I F +G+L A +++M+ + + YN LIN CKEG ++ A LL M
Sbjct: 187 TYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVM 246
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
K+G + T++ L+DG C G ++ A+ M ++G + N+ +YN +++ L K ++
Sbjct: 247 TKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRV 306
Query: 328 DHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 365
D A+N+ M V D+ TY+S++ LCK+ R+ SA L+
Sbjct: 307 DEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLM 348
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 187/383 (48%), Gaps = 4/383 (1%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
+M GI + VT N LI ++ S +L ++L++G PD + N+LM L G
Sbjct: 35 QMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKG 94
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
+ ++ ++ ++ +LNGLCK T A+++ R ++ P +V YN
Sbjct: 95 EVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYN 154
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
+I GLCK + A + E+ G P+AITYTT++ + +L M K
Sbjct: 155 TIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILK 214
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
+ Y +I A K G +KEA + + M +G++ +V+Y+TL++ YC G+++ A
Sbjct: 215 NINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNA 274
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
+ M + G + Y++ I+I+GLCK + A L M + YN ++D
Sbjct: 275 KQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDG 334
Query: 321 LGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
L K G+I A+N+ M + D TY+S++ LCK + L A+ L + + G++
Sbjct: 335 LCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPT 394
Query: 377 KSAQKAVVDGLRHSGCRREAKKI 399
A++DGL G + A+++
Sbjct: 395 MYTYTALIDGLCKGGRLKNAQEL 417
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 172/372 (46%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ + Y + + M GI PD +TY +LI G L + LLDEM+
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKN 215
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P V+ YN L++ L + G EA + M + P T++ +++G C NA
Sbjct: 216 INPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAK 275
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + + G P + +YNI+I GLCK R+ A +L+E+ P+ +TY +++
Sbjct: 276 QIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGL 335
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + L +++ M +G D Y +++ A K L +AT +M G+Q +
Sbjct: 336 CKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTM 395
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y LI+ CK G+L+ A L + +G D +T+T++I GLCK G A
Sbjct: 396 YTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSK 455
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSA 361
M G N + I+ L + + D A + M K V ++ A
Sbjct: 456 MEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLVLDFKVADVFVQNENDKA 515
Query: 362 SKLLLSCLKSGV 373
KLL + G+
Sbjct: 516 EKLLHEMIAKGL 527
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 137/272 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+A C+ + +L M + GI P VVTY++L+ G + + + M++M
Sbjct: 225 ILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQM 284
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V+SYN +++ L + + DEA + ++M+ ++ P T T+N +++GLCK+ +A
Sbjct: 285 GVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSA 344
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + G ++VTY L+ LCK L A + ++ + G P TYT ++
Sbjct: 345 LNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDG 404
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + K E+ + KG D + Y +I+ K G EA +M +G +
Sbjct: 405 LCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPN 464
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
V++ +I ++ + + A LL EM +G
Sbjct: 465 AVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 145/333 (43%), Gaps = 39/333 (11%)
Query: 98 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 157
TP FN +L L K + A+ + + ++ G VT NILI C G++ +
Sbjct: 7 TPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66
Query: 158 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 217
+L ++ G+ P+ IT T+MK + K L + +G+ D Y T++
Sbjct: 67 VLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE----------------------- 254
KIG + A + + + ++V YNT+I+ CK+
Sbjct: 127 KIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI 186
Query: 255 ------------GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
G+L A+ LLDEM + Y + ILI+ LCK GN+K A+ L M
Sbjct: 187 TYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVM 246
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRL 358
K G + Y+ ++D G++ +A +F +M + ++Y+ M++ LCK KR+
Sbjct: 247 TKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRV 306
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
A LL L + +++DGL SG
Sbjct: 307 DEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSG 339
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 116/241 (48%), Gaps = 12/241 (4%)
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
H P I + I+ + ++Y + + M+ KG + +I F +G++ +
Sbjct: 6 HTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSF 65
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ +++ G Q D ++ NTL+ C +G+++ + D++ QGF+ D ++ L++GL
Sbjct: 66 SVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGL 125
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G + A L + N+ YN I+D L KD ++ A +++ M+ + D+
Sbjct: 126 CKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDA 185
Query: 343 FTYSSMVHNLCKAKRLPSASKLL----LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
TY+++++ C +L A LL L + GV I +++ L G +EAK
Sbjct: 186 ITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYI----YNILINALCKEGNVKEAKN 241
Query: 399 I 399
+
Sbjct: 242 L 242
>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
Length = 794
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 195/406 (48%), Gaps = 23/406 (5%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
+RM E P YN+++ + ++ +L L + M+ G P+ +YN LM L +
Sbjct: 160 FSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCK 219
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
G +A ++F +M+ + P + ++L+ LC D A+++ ++ G +P+ VT
Sbjct: 220 QGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVT 279
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
YN + GLCK GR+ A L L D G A Y+ ++ F+ R++ G M
Sbjct: 280 YNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTML 339
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
+ + D Y +I + GR+++A +++ M G D YNT++ + C G LE
Sbjct: 340 ERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLE 399
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A+ L EM + D T TI+I GLCK G + A + M + G D + YN ++
Sbjct: 400 RAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALI 459
Query: 319 DRLGKDGKIDHAINVFESME-----------------VKDSFTYSSMVHNLCKAKRLPSA 361
D ++G+++ A +F ME V+DS + +VH++C++ ++ A
Sbjct: 460 DGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKA 519
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
KLL S + SGV +++GL C+ A+ + +R+ K
Sbjct: 520 YKLLRSIIDSGVVPDVVTYNTLINGL----CK--ARNLDGAVRLFK 559
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 189/398 (47%), Gaps = 24/398 (6%)
Query: 13 DAGYTIL-----NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 67
D+G +L NRM AG +P+ TYN L+ G + + +L + DEML+ GI P+V
Sbjct: 184 DSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVK 243
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
Y L+ L GK DEA ++ M P T+N L+GLCK + A + L
Sbjct: 244 IYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVML 303
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
Q GF L Y+ LI GL +A R K + + +P+ + YT +++ C +
Sbjct: 304 QDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRI 363
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
+ L L MK+KG+ D F Y TV+ G L+ A +M+ + + LD + +
Sbjct: 364 EDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIM 423
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
I CK G ++ A + DEM + G + T+ LIDG + G ++ AR+ M ++G
Sbjct: 424 ICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGN 482
Query: 308 DSNL--------------EAYNCIVDRLGKDGKIDHAI----NVFESMEVKDSFTYSSMV 349
+ +L E+ +V + + G++ A ++ +S V D TY++++
Sbjct: 483 NPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLI 542
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ LCKA+ L A +L G+ + ++DGL
Sbjct: 543 NGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGL 580
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 162/333 (48%), Gaps = 22/333 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID Q FD G+ M E ISPDVV Y +I G + +L LD M + G
Sbjct: 318 LIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKG 377
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD + YN+++ L G + A+ + +M+ +L + T IM+ GLCK D A+
Sbjct: 378 FVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAM 437
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + +HG P ++TYN LI G + GRL AR + ++ + G+ P+ T+
Sbjct: 438 QIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSLFLRLTLGANQ 496
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ S RK ++ + G++ +A + ++ GV D+
Sbjct: 497 VRD----------SESLRK-----------LVHDMCQSGQVLKAYKLLRSIIDSGVVPDV 535
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTLIN CK L+ A L E++ +G D+ T+ LIDGL +A A + +
Sbjct: 536 VTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQN 595
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
+ + G +L YN ++ L + K+ AIN++
Sbjct: 596 ILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 187/424 (44%), Gaps = 25/424 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ + C D +L M++ G PD VTYN+ ++G + ++ + L + +
Sbjct: 247 VLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDG 306
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G + Y+ L+ LFQ + DE ++ M+ +++P + IM+ G + ++A
Sbjct: 307 GFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDA 366
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L ++K GFVP+ YN ++K LC G L A + E+ + ++ T TIM C
Sbjct: 367 LSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTT-QTIMIC 425
Query: 181 CFRNRK-YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM------- 232
R ++I M G Y +I F + GRL+EA +M
Sbjct: 426 GLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPS 485
Query: 233 ----VTDGVQL--DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+T G D S L++ C+ G++ AY LL + G D T+ LI+GL
Sbjct: 486 LFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGL 545
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI----NVFESMEVKDS 342
CKA N+ GA + + G + Y ++D L + + + A+ N+ +S
Sbjct: 546 CKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSL 605
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGV------RILKSAQKAVVDGLRHSGCRREA 396
Y+SM+ +LC+ K+L A L L L +L +A K + DG G R
Sbjct: 606 SIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELI 665
Query: 397 KKIQ 400
K Q
Sbjct: 666 KIDQ 669
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 190/425 (44%), Gaps = 29/425 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ + + M + GI P+V Y L++ + ++ LL M +
Sbjct: 212 VLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDK 271
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC---GDLTPCTATFNIMLNGLCKNRYT 117
G PD +YN+ + L ++G+ +EA FQ ++ G ++ +++GL + R
Sbjct: 272 GCLPDEVTYNAFLSGLCKVGRVNEA---FQRLVMLQDGGFALGLKGYSCLIDGLFQARRF 328
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
D ++ + + P++V Y I+I+G +AGR+ A L + G P+ Y T+
Sbjct: 329 DEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTV 388
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+K + + + S M + D +I K G + EA ++M G
Sbjct: 389 LKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGC 448
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC-------------DKYTHTILID 284
+++YN LI+ + +EG+LE A +L +ME D + L+
Sbjct: 449 DPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVH 508
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 340
+C++G + A L + G ++ YN +++ L K +D A+ +F+ +++K
Sbjct: 509 DMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISP 568
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 400
D TY +++ L +A R A L + L+SG S ++ + + S CR KK+
Sbjct: 569 DEITYGTLIDGLLRAHRENDAMMLFQNILQSG----SSPSLSIYNSMMRSLCR--MKKLS 622
Query: 401 SKIRM 405
I +
Sbjct: 623 QAINL 627
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 130/477 (27%), Positives = 208/477 (43%), Gaps = 75/477 (15%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I Y F+ Y++L R + G P V+ YN ++ R + +L +L+ M +M
Sbjct: 348 MIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM-KMD 406
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P++ SYN L+ L + G+ + A +V M L P T NIM++ LCK + D A
Sbjct: 407 AAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEAC 466
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI---- 177
+F GL P+ VT+ LI GL + G++ A + +++ DSG PNA+ YT++
Sbjct: 467 SIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNF 526
Query: 178 -------------------------------MKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
M C F+ + + G + +K +G T D
Sbjct: 527 FKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDV 586
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I VK G K+ +M G+ LD +YN +I+ +CK GK+ AY LL+E
Sbjct: 587 RSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEE 646
Query: 267 MEKQGFECDKYT-----------------------------------HTILIDGLCKAGN 291
M+ +G + T ++ LIDG K G
Sbjct: 647 MKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGR 706
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSS 347
I A L LE + + G N +NC++D L K +ID A+ F++M+ + TYS
Sbjct: 707 IDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSI 766
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
MV+ LCK ++ A K G++ ++ GL G EAK + + +
Sbjct: 767 MVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFK 823
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 173/380 (45%), Gaps = 35/380 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID + + Y + +M ++G +P+ V Y SLI + + EM+ G
Sbjct: 487 LIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRG 546
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ N+ M C+F+ G+ ++ +F+++ LTP +++I+++GL K ++ +
Sbjct: 547 CSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTY 606
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F +++ G + YNI+I G CK+G++ A +L+E+ G P +TY +++
Sbjct: 607 KLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGL 666
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + K K + Y ++I F K+GR+ EA +E+++ G+ +
Sbjct: 667 AKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNT 726
Query: 242 -----------------------------------VSYNTLINLYCKEGKLEAAYLLLDE 266
V+Y+ ++N CK K A++ E
Sbjct: 727 YTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQE 786
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+KQG + + T+T +I GL + GN+ A+ E G + YN +++ L K
Sbjct: 787 MQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANK 846
Query: 327 IDHAINVFESMEVKDSFTYS 346
A +FE +K YS
Sbjct: 847 AMDAYILFEETRLKGCRIYS 866
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 162/376 (43%), Gaps = 42/376 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI A D T+L +M+E G V + +LI R + +L LLDEM
Sbjct: 208 LIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNS 267
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
D+ YN + C ++GK D A + F ++ L P TF M+ LCK D A+
Sbjct: 268 FNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAV 327
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F L + VP + YN +I G G+ A +L+ G P+ I Y I+ C
Sbjct: 328 ELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCL 387
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R K + L IL AMK ++
Sbjct: 388 GRKGKVEEALRILEAMKMDAAP------------------------------------NL 411
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLE 300
SYN LI++ CK G+LEAA + D M++ G + T I+ID LCKA + A + L
Sbjct: 412 TSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLG 471
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
+K+ ++ + ++D LG+ GK++ A ++E M + ++ Y+S++ N K
Sbjct: 472 LDHKVCTPDSV-TFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCG 530
Query: 357 RLPSASKLLLSCLKSG 372
R K+ + G
Sbjct: 531 RKEDGHKIYKEMMHRG 546
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 35/297 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID +C+ + Y +L M+ G+ P VVTY S+I G + L + L +E
Sbjct: 626 IVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 685
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ +V Y+SL+ ++G+ DEA + ++++ LTP T T+N +L+ L K D A
Sbjct: 686 AVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEA 745
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L F+ ++ P VTY+I++ GLCK + A +E+ G PN ITYTT+
Sbjct: 746 LVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTM--- 802
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
I+ ++G + EA D E+ + G D
Sbjct: 803 --------------------------------ISGLARVGNVLEAKDLFERFKSSGGIPD 830
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
YN +I K AY+L +E +G T +L+D L KA ++ A +
Sbjct: 831 SACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQAAI 887
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 143/309 (46%), Gaps = 3/309 (0%)
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+YN+L+ + + + ++ ++M P T M+ K+R A + +
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETM 193
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
+K F P Y LI L A +L+++ + G+ +TT++ R +
Sbjct: 194 RKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRV 253
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
L +L MK + D Y I F K+G++ A + ++ + G+ D V++ ++
Sbjct: 254 DAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSM 313
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
I + CK +++ A L +E++ Y + +I G G A LE + G
Sbjct: 314 IGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGC 373
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS---FTYSSMVHNLCKAKRLPSASKL 364
++ AYNCI+ LG+ GK++ A+ + E+M++ + +Y+ ++ LCKA L +A K+
Sbjct: 374 IPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNILIDMLCKAGELEAALKV 433
Query: 365 LLSCLKSGV 373
S ++G+
Sbjct: 434 QDSMKEAGL 442
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 199/437 (45%), Gaps = 47/437 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A+ + ++ M G PD+ TYN L G + + + L DEM +G
Sbjct: 284 LVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLG 343
Query: 62 IP-PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV +YN+L+ F+ +A R+ ++M + P T NI++ LCK + A
Sbjct: 344 TALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEA 403
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + G P+++TYN LI CKAG + A ++ E+ G + T T++
Sbjct: 404 LGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYN 463
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK---------------------- 218
+ ++Y+ E+L + ++G+ D Y TV+AA+ K
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523
Query: 219 -------------IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ RLKEA D + + V G+ D +YN +I+ YCKEG LE A+ +
Sbjct: 524 ISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHN 583
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+M + F+ D T L++GLC G + A E + G ++ YN ++ + K G
Sbjct: 584 KMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVG 643
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG-------VR 374
+D A++ F+ MEVK D+FTY+ ++ L +A R A +L SG
Sbjct: 644 DVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACP 703
Query: 375 ILKSAQKAVVDGLRHSG 391
+LK + D H G
Sbjct: 704 LLKPSSADEADVKEHEG 720
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 178/353 (50%), Gaps = 5/353 (1%)
Query: 14 AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 73
A + + E + P+ T+N L+ L+ +L L M G+ PD +YN+L+
Sbjct: 191 ASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLL 250
Query: 74 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 133
+ + G EA + M + P T+N +++ + + A ++ + +GF
Sbjct: 251 NAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFE 310
Query: 134 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHA-PNAITYTTIMKCCFRNRKYKLGLE 192
P+L TYN+L GLC+AG++ A + E+ G A P+ +TY T++ CF+ R L
Sbjct: 311 PDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALR 370
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+L M+ KG + V+ + K G+L+EA +E++ +G+ D+++YNTLI+ YC
Sbjct: 371 LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYC 430
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K G + A+ L+DEM +G + D +T ++ LCK + A L + GF +
Sbjct: 431 KAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEV 490
Query: 313 AYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSA 361
+Y ++ K+ + A+ +++ M + TY++++ LC+ +RL A
Sbjct: 491 SYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEA 543
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 156/319 (48%), Gaps = 7/319 (2%)
Query: 61 GIPPDVWSYNSLMHCLFQLGK--PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G+ P + + N+++ L + P + VF+ +I L P TFN++++ C
Sbjct: 166 GVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLA 225
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
+AL +Q G P+ VTYN L+ C+ G L AR +L + G AP TY T++
Sbjct: 226 DALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLV 285
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
R K +++ +M G+ D Y + + G++ EA ++M G
Sbjct: 286 SAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTA 345
Query: 239 L-DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
L D+V+YNTL++ K A LL+EM +G + TH I++ LCK G ++ A
Sbjct: 346 LPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALG 405
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 353
LE + + G ++ YN ++D K G + A + + M K D+FT +++++NLC
Sbjct: 406 KLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLC 465
Query: 354 KAKRLPSASKLLLSCLKSG 372
K KR A +LL S + G
Sbjct: 466 KMKRYEDAEELLHSPPQRG 484
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 186/397 (46%), Gaps = 15/397 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ + C+ + L ++ E G++PDV+TYN+LI + ++ + L+DEM+
Sbjct: 389 IVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGK 448
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ D ++ N++++ L ++ + ++A + P ++ ++ K + A
Sbjct: 449 GLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPA 508
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
LR++ + + +P + TYN LIKGLC+ RL+ A L E + G P+ TY I+
Sbjct: 509 LRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHA 568
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + M + D T++ G+L +A E V G ++D
Sbjct: 569 YCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVD 628
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++YNTLI CK G ++ A D+ME +G + D +T+ +++ L +AG + A L
Sbjct: 629 VITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLH 688
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHA--------INVFESMEVKDSF--TYSSMVH 350
+ G S +++ C L K D A S + +D+ TY ++
Sbjct: 689 KLADSGKLS--QSFAC---PLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLN 743
Query: 351 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
LC +L A +L ++ G+ + S +++GL
Sbjct: 744 GLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGL 780
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 165/361 (45%), Gaps = 5/361 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LIDAYC+ + +T+++ M G+ D T N+++ + + +LL + G
Sbjct: 425 LIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRG 484
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD SY ++M F+ P+ A R++ MI L P +T+N ++ GLC+ A+
Sbjct: 485 FVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAI 544
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ G VP+ TYNI+I CK G L A ++ ++ P+ +T T+M
Sbjct: 545 DKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGL 604
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K L++ + KG D Y T+I + K+G + A + + M G+Q D
Sbjct: 605 CLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDA 664
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN +++ + G+ E A+ +L ++ G + +L ++K E
Sbjct: 665 FTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEA 724
Query: 302 -MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
++ D+ LE Y ++ L G++ A V + M K D TY +++ L K +
Sbjct: 725 ESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQ 784
Query: 357 R 357
+
Sbjct: 785 K 785
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 36/189 (19%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C D + E G DV+TYN+LI + + +L D+M G
Sbjct: 600 LMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKG 659
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEAN----------RVFQDMICGDLTPCTA--------- 102
+ PD ++YN ++ L + G+ +EA+ ++ Q C L P +A
Sbjct: 660 LQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHE 719
Query: 103 -----------------TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
T+ LNGLC A + + + G + TY L++G
Sbjct: 720 GKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEG 779
Query: 146 LCKAGRLRT 154
L K + +T
Sbjct: 780 LIKRQKRQT 788
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 182/363 (50%), Gaps = 4/363 (1%)
Query: 14 AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 73
A +LN M G + V+Y ++I+G + + + L DEML+ GI PD+ ++N L+
Sbjct: 164 AALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLI 223
Query: 74 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 133
H L + G E+ ++F ++ + P TFNI + GLC+ D A R+ + G
Sbjct: 224 HVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLT 283
Query: 134 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 193
P++++YN LI G CK +L A L ++ +SG PN TY TI+ + + +I
Sbjct: 284 PDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKI 343
Query: 194 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 253
L KG+ D F Y ++I G + A + + G + I+ YNTL+ K
Sbjct: 344 LRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSK 403
Query: 254 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
+G + A L+ +M + G D +T+ ++++GLCK G + A L G ++
Sbjct: 404 QGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFT 463
Query: 314 YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 369
+N ++D K +D AI + ++M D TY+++++ LCKA++L + + L
Sbjct: 464 FNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAML 523
Query: 370 KSG 372
+ G
Sbjct: 524 EKG 526
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 180/374 (48%), Gaps = 4/374 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + + +++ + G+ P++ T+N I G R + + LL+ ++ G
Sbjct: 222 LIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG 281
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV SYN+L+ + K EA M+ + P T+N ++NG CK NA
Sbjct: 282 LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNAD 341
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ R GF+P+ TY+ LI GLC G + A + E + G + I Y T++K
Sbjct: 342 KILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGL 401
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ L+++ M G + D + Y V+ K+G L +A + + G DI
Sbjct: 402 SKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDI 461
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++NTLI+ YCK+ ++ A +LD M G D T+ L++GLCKA + +
Sbjct: 462 FTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKA 521
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M + G N+ YN +++ KD K+ A+ +F+ M+ + D T +++ LC
Sbjct: 522 MLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581
Query: 358 LPSASKLLLSCLKS 371
L A +L ++ K
Sbjct: 582 LDKAYELFVTIEKE 595
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 177/355 (49%), Gaps = 4/355 (1%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
Y + + M + GI PD++T+N LI + + S L ++++ G+ P+++++N +
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
L + G DEA R+ + ++ LTP ++N ++ G CK+ A + G P
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
TYN +I G CKAG ++ A IL++ G P+ TY++++ + + +
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
KG+ Y T++ K G + +A M+ M+ G DI +YN ++N CK
Sbjct: 380 YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKM 439
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
G L A +L++ +G D +T LIDG CK N+ A L+ M G ++ Y
Sbjct: 440 GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITY 499
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
N +++ L K K+D+ ++ F++M K + TY+ ++ + CK +++ A +L
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELF 554
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 187/413 (45%), Gaps = 40/413 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ I C+ + D +L + G++PDV++YN+LI G ++S L + L +M+
Sbjct: 256 IFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNS 315
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ ++YN++++ + G A+++ +D + P T++ ++NGLC + + A
Sbjct: 316 GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRA 375
Query: 121 LRMF-------------------RGLQKHGFV----------------PELVTYNILIKG 145
+ +F +GL K G V P++ TYN+++ G
Sbjct: 376 MAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNG 435
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCK G L A IL + G P+ T+ T++ + R +EIL M G T D
Sbjct: 436 LCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPD 495
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y T++ K +L D + M+ G +I++YN LI +CK+ K+ A L
Sbjct: 496 VITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFK 555
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
EM+ +G D T LI GLC G + K L + + F + +N +++
Sbjct: 556 EMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXK 615
Query: 325 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ A +F M D++TY M+ + CK + A LL + G+
Sbjct: 616 LNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGL 668
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 176/361 (48%), Gaps = 6/361 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
+ RM P V +YN+++ S + + M ++GI PDV+++ M
Sbjct: 97 NVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSF 156
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
G+P A R+ +M ++ +++G K A +F + K G P++
Sbjct: 157 CITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDI 216
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+T+N LI LCK G ++ + + ++ G PN T+ ++ R +L +
Sbjct: 217 LTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLES 276
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
+ +G T D Y T+I F K +L EA Y+ +MV GV+ + +YNT+IN +CK G
Sbjct: 277 IVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGM 336
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYN 315
++ A +L + +GF D++T++ LI+GLC G++ A + E M K GF ++ YN
Sbjct: 337 MQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK-GFKHSIILYN 395
Query: 316 CIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
+V L K G + A+ + + M D +TY+ +V+ LCK L A+ +L +
Sbjct: 396 TLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAK 455
Query: 372 G 372
G
Sbjct: 456 G 456
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 177/377 (46%), Gaps = 5/377 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ +C+ IL G PD TY+SLI G + ++ ++ + E +E G
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ YN+L+ L + G +A ++ +DM+ +P T+N+++NGLCK +A
Sbjct: 387 FKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDAN 446
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ G +P++ T+N LI G CK + A IL + G P+ ITY T++
Sbjct: 447 GILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGL 506
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ RK ++ AM KG T + Y +I +F K ++ EA + ++M T G+ DI
Sbjct: 507 CKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDI 566
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQ-GFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+ TLI C G+L+ AY L +EK+ F I+I+ C N+ A
Sbjct: 567 VTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFH 626
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN-VFESME--VKDSFTYSSMVHN-LCKAK 356
M + Y ++D K G ID A + E++ + SFT V N LC
Sbjct: 627 KMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTH 686
Query: 357 RLPSASKLLLSCLKSGV 373
RL A ++ +++G+
Sbjct: 687 RLSEAVVIINLMVQNGI 703
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 89/243 (36%), Gaps = 71/243 (29%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ + D IL+ M GI+PDV+TYN+L+ G + L +D MLE G
Sbjct: 467 LIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKG 526
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTP---------------------- 99
P++ +YN L+ + K EA +F++M LTP
Sbjct: 527 CTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAY 586
Query: 100 --------------CTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI-- 143
TA FNIM+N C A ++F + P+ TY ++I
Sbjct: 587 ELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDS 646
Query: 144 -------------------KGL--------------CKAGRLRTARWILKELGDSGHAPN 170
KGL C RL A I+ + +G P
Sbjct: 647 YCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706
Query: 171 AIT 173
+
Sbjct: 707 EVN 709
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 194/395 (49%), Gaps = 4/395 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ + + + ++M E G P TY LI L+ + +L DEM+
Sbjct: 271 ILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPR 330
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V +Y L+ L + GK +EAN V + M+ + P T+N ++NG CK+ A
Sbjct: 331 GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPA 390
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++K P + T+N L++GLC+ G+ A +LK + D+G +P+ ++Y ++
Sbjct: 391 FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R ++LS+M D + +I AF K G+ A+ ++ M+ G+ LD
Sbjct: 451 LCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD 510
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+ TLI+ CK GK A +L+ + K ++ +++D L K +K L
Sbjct: 511 EVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLG 570
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
+NK+G ++ Y +VD L + G I + + E M++ + + Y+ +++ LC+
Sbjct: 571 KINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFG 630
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
R+ A KLL + SGV +V G ++G
Sbjct: 631 RVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG 665
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 196/414 (47%), Gaps = 7/414 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L+ +C+ ++ + + M +E +P+ V+Y+ LI G L + L D+M E
Sbjct: 236 LLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK 295
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +Y L+ L G D+A +F +MI P T+ ++++GLC++ + A
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK- 179
+ R + K P ++TYN LI G CK GR+ A +L + PN T+ +M+
Sbjct: 356 NGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
C + YK + +L M G + D Y +I + G + A + M ++
Sbjct: 416 LCRVGKPYK-AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEP 474
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D +++ +IN +CK+GK + A L M ++G D+ T T LIDG+CK G + A L
Sbjct: 475 DCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFIL 534
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
E + K+ + + N I+D L K K+ + + + V TY+++V L ++
Sbjct: 535 ETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRS 594
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+ + ++L SG +++GL G EA+K+ S ++ + +S
Sbjct: 595 GDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 178/401 (44%), Gaps = 44/401 (10%)
Query: 54 LDEMLEM-GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 112
DE+ E+ G + Y+SL+ L +L A ++ M + ++N LC
Sbjct: 147 FDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALC 206
Query: 113 KNRYTDNALRMFRGLQKHGFV------------------------------------PEL 136
KN YT+ A + K GFV P
Sbjct: 207 KNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNS 266
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
V+Y+ILI GLC+ GRL A + ++G+ G P+ TYT ++K +
Sbjct: 267 VSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDE 326
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M +G + Y +I + G+++EA +MV D + +++YN LIN YCK+G+
Sbjct: 327 MIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGR 386
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+ A+ LL MEK+ + + T L++GLC+ G A L+ M G ++ +YN
Sbjct: 387 VVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNV 446
Query: 317 IVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++D L ++G ++ A + SM D T++++++ CK + AS L L+ G
Sbjct: 447 LIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG 506
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKIQS---KIRMAKISH 410
+ + + ++DG+ G R+A I K+R+ H
Sbjct: 507 ISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPH 547
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 190/421 (45%), Gaps = 25/421 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ +L RM + G+SPD+V+YN LI G R ++ + LL M
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFD 471
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD ++ ++++ + GK D A+ M+ ++ T +++G+CK T +AL
Sbjct: 472 IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL 531
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L K + + N+++ L K +++ +L ++ G P+ +TYTT++
Sbjct: 532 FILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGL 591
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ IL MK G + + Y +I + GR++EA + M GV +
Sbjct: 592 IRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC------------KA 289
V+Y ++ Y GKL+ A + M ++G+E + ++ L+ G
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTV 711
Query: 290 GNIKGARLHLEYMNKI--------GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 341
+I E +N++ G S L + +V RL K+G+ D + ++ +++ +
Sbjct: 712 SDIALRETDPECINELISVVEQLGGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERG 769
Query: 342 SFTYSSM---VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
F +M + + C K+ +L+ LKSG + V+ GL+ G A++
Sbjct: 770 VFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARE 829
Query: 399 I 399
+
Sbjct: 830 L 830
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 127/299 (42%), Gaps = 23/299 (7%)
Query: 118 DNALRMFRGLQKHG-FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
D +R F + KH + + N L+K + +G R A ++
Sbjct: 84 DICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLYRVAHAVI---------------VA 128
Query: 177 IMKCCFRNRKYKLGLEILSAMKRK--GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
++K C R K L L R+ G+ + Y +++ + K+ A +M
Sbjct: 129 LIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEA 188
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
DG + ++ Y T++N CK G EAA + + ++ K GF D + T L+ G C+ N++
Sbjct: 189 DGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRD 248
Query: 295 ARLHLEYMNK-IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 349
A + M+K + N +Y+ ++ L + G+++ A + + M K + TY+ ++
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
LC + A L + G + ++DGL G EA + K+ +I
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 94/233 (40%), Gaps = 54/233 (23%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ CQF + +L+ M+++G+SP+ VTY ++ G N L +L+ + M+E
Sbjct: 621 IIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVER 680
Query: 61 GIPPDVWSYNSLMH---------------------------------------------- 74
G + Y+SL+
Sbjct: 681 GYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISG 740
Query: 75 -CLFQL------GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
C+F + G+ DE+N + Q+++ + A +I++ C + + + +
Sbjct: 741 LCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKA-MDIIMESYCSKKKHTKCMELITLV 799
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
K GFVP ++ ++I+GL K G AR ++ EL S T ++C
Sbjct: 800 LKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVEC 852
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 186/346 (53%), Gaps = 4/346 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++L M + PDV TY+ +I ++ L +++LL+EM + IPP++++YNSL+ L
Sbjct: 189 SLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGL 248
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+LG+ ++ + +M+ ++ P TF+I+++GLCK ++A + R + + G P++
Sbjct: 249 CKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDI 308
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+TY+ ++ G C G++ AR + L D G PN +Y+ ++ + + +++
Sbjct: 309 ITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGE 368
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
+ +KG D Y T++ +++GR+ +A ++M+ G DI ++TL+ Y K G
Sbjct: 369 ISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGL 428
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+E A LL ++E+ + + +T++I+GLCK ++ A E + IG ++ YN
Sbjct: 429 VEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNV 488
Query: 317 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRL 358
++ ++G D + ME ++ TY+ ++ ++ ++
Sbjct: 489 MITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKI 534
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 166/337 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++IDA C+ ++ DA +LN M++ I P++ TYNSLI G + LL EM+ +
Sbjct: 208 IVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNL 267
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P+V +++ L+ L + GK ++A+ V + MI + P T++ +++G C D A
Sbjct: 268 NINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRA 327
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+F L+ G P + +Y+ILI G CK L A + E+ G P+ +TY+TI+
Sbjct: 328 RRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHG 387
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ +I M R G T D + T++ + K G ++EA ++ + +
Sbjct: 388 LIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTN 447
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I Y +IN CK ++ A+ + +++ G D T+ ++I G C+ G + L
Sbjct: 448 ISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILR 507
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M G +N YN I+ + KI ++ + M
Sbjct: 508 KMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEM 544
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 197/409 (48%), Gaps = 5/409 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ ++YC D +++L + GI +VVT+N+L+ G + ++ ++ L +++
Sbjct: 102 IVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVRE 161
Query: 61 GI-PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
I P+ Y ++M+ L + G ++ + + M G+ P T++I+++ LCK+ D
Sbjct: 162 KICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDA 221
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+ + +++ P + TYN LI GLCK G+ + +L E+ + PN T++ ++
Sbjct: 222 AINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILID 281
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ K + E++ M KG D Y ++ + G++ A + G++
Sbjct: 282 GLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKP 341
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+I SY+ LIN YCK+ L A L E+ ++G + D T++ ++ GL + G I A+
Sbjct: 342 NIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIF 401
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT----YSSMVHNLCKA 355
+ M ++G ++ ++ ++ K G ++ A+ +F +E T Y+ +++ LCK
Sbjct: 402 DEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKN 461
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
R+ A + G+ ++ G G E K I K+
Sbjct: 462 DRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKME 510
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 162/360 (45%), Gaps = 5/360 (1%)
Query: 45 SLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF 104
S L ++ L M+ M P V ++ L + + +F++M + +
Sbjct: 41 SCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSIL 100
Query: 105 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL-G 163
NI+ N C D A + K G +VT+N L+ GL ++ A + K+L
Sbjct: 101 NIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVR 160
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+ PN + Y T+M + + L +L M++ D Y VI A K L
Sbjct: 161 EKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLD 220
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A + + +M + +I +YN+LI+ CK G+ E LL EM + +T +ILI
Sbjct: 221 AAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILI 280
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
DGLCK G ++ A + +M + G + ++ Y+ I+D G++D A VF + K
Sbjct: 281 DGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIK 340
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ F+YS +++ CK K L A +L + G++ ++ GL G +AKKI
Sbjct: 341 PNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKI 400
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 169/367 (46%), Gaps = 7/367 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
D ++ +RM P V+ ++ L S + L EM +GIP N
Sbjct: 43 LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL-CKNRYTDNALRMFRGLQKH 130
+ + + D A V + + TFN +L GL +N+ TD A+ +F+ L +
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTD-AVVLFKKLVRE 161
Query: 131 GFV-PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
P V Y ++ GL K G +L+ + P+ TY+ ++ ++
Sbjct: 162 KICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDA 221
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+ +L+ MK+K + F Y ++I K+G+ ++ + +MV + ++ +++ LI+
Sbjct: 222 AINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILID 281
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
CKEGK+E A ++ M ++G E D T++ ++DG C G + AR + G
Sbjct: 282 GLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKP 341
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
N+ +Y+ +++ K + A+ +F + K D+ TYS+++H L + R+ A K+
Sbjct: 342 NIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIF 401
Query: 366 LSCLKSG 372
L+ G
Sbjct: 402 DEMLRVG 408
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 118/276 (42%), Gaps = 70/276 (25%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS------------------------ 36
+LID C+ + ++ M E G+ PD++TY++
Sbjct: 278 ILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDK 337
Query: 37 -----------LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
LI G + L+ ++ L E+ + G+ PD +Y++++H L ++G+ +A
Sbjct: 338 GIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDA 397
Query: 86 NRVFQDMICGDLTP-----------------------------------CTATFNIMLNG 110
++F +M+ TP + + +++NG
Sbjct: 398 KKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVING 457
Query: 111 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
LCKN A +F L G +P++ TYN++I G C+ G + IL+++ D+G N
Sbjct: 458 LCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPAN 517
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
ITY IM+ FR+ K + + M +G++FD
Sbjct: 518 NITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDA 553
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 132/323 (40%), Gaps = 32/323 (9%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
D+A +F M+ P F+ + + ++ + +FR ++ G NI+
Sbjct: 44 DDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIV 103
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
C R+ A +L +G N +T+ T++ F K + + + R+
Sbjct: 104 TNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKI 163
Query: 203 -TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ Y TV+ K G ++ + M + D+ +Y+ +I+ CK+ L+AA
Sbjct: 164 CEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAI 223
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
LL+EM+++ + +T+ LIDGLCK G + + L M + + N+
Sbjct: 224 NLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVH--------- 274
Query: 322 GKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
T+S ++ LCK ++ A +++ ++ GV
Sbjct: 275 ----------------------TFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYS 312
Query: 382 AVVDGLRHSGCRREAKKIQSKIR 404
A++DG G A+++ + +R
Sbjct: 313 AIMDGYCLRGQVDRARRVFNVLR 335
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ + I ++ G+ PDV TYN +I G R L +L +M +
Sbjct: 453 VVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDN 512
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
G P + +YN +M F+ K E ++M + T +++N L +N
Sbjct: 513 GCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKEN 566
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 196/407 (48%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ YC+F D + ++ +M++ G+ P+ TY S+I R L+ + + EM+ G
Sbjct: 710 VINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQG 769
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD Y +L+ + G A++ F +M D+TP T+ +++G C+ A
Sbjct: 770 ILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 829
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + G P+++T+ L+ G CKAG ++ A + + +G +PN +TYTT++
Sbjct: 830 KLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 889
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ E+L M + G + F Y +++ K G ++EA + + G+ D
Sbjct: 890 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 949
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y TL++ YCK G+++ A +L EM +G + T +L++G C G ++ L +
Sbjct: 950 VTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 1009
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G N +NC+V + + A +++ M + D TY ++V C A+
Sbjct: 1010 MLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARN 1069
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A L G + S ++ G EA++I ++R
Sbjct: 1070 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMR 1116
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 192/387 (49%), Gaps = 5/387 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRN-SLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
+ +M G+ V + N +A +++ + + ++ + E E+G+ +V SYN ++H +
Sbjct: 620 VFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHFV 679
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
QLG+ +EA+ + M TP +++ ++NG C+ D ++ +++ G P
Sbjct: 680 CQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNS 739
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
TY +I LC+ +L A E+ G P+ I YTT++ + + +
Sbjct: 740 YTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYE 799
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M + T D Y +I+ F +IG + EA +M+ G++ DI+++ L+N YCK G
Sbjct: 800 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGH 859
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
++ A+ + + M + G + T+T LIDGLCK G++ A L M KIG N+ YN
Sbjct: 860 IKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 919
Query: 317 IVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
IV+ L K G I+ A+ + E D+ TY++++ CK+ + A ++L L G
Sbjct: 920 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKG 979
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKI 399
++ +++G G + +K+
Sbjct: 980 LQPTIVTFNVLMNGFCLHGMLEDGEKL 1006
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 180/388 (46%), Gaps = 8/388 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C+ + M GI PD + Y +L+ G + + + EM
Sbjct: 745 IIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRD 804
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV +Y +++ Q+G EA ++F +M+C L P TF ++NG CK + +A
Sbjct: 805 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAF 864
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + + G P +VTY LI GLCK G L +A +L E+ G PN TY +I+
Sbjct: 865 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 924
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + ++++ + G D Y T++ A+ K G + +A + + +M+ G+Q I
Sbjct: 925 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTI 984
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++N L+N +C G LE LL+ M +G + T L+ C N+K A +
Sbjct: 985 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKD 1044
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G + + + Y +V + A +F+ M+ K TYS ++ K K+
Sbjct: 1045 MCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKK 1104
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVD 385
A ++ + G+ +A K + D
Sbjct: 1105 FVEAREIFDQMRRDGL----AADKEIFD 1128
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 166/371 (44%), Gaps = 35/371 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D +C+ A M I+PDV+TY ++I+G + + + L EML G
Sbjct: 780 LVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRG 839
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ ++ LM+ + G +A RV MI +P T+ +++GLCK D+A
Sbjct: 840 LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 899
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K G P + TYN ++ GLCK+G + A ++ E +G + +TYTT+M
Sbjct: 900 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 959
Query: 182 FRNRKYKLGLEILSAMKRKG-----YTFDGF--GYC------------------------ 210
++ + EIL+ M KG TF+ G+C
Sbjct: 960 CKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 1019
Query: 211 TVIAAFVKI----GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
T VK LK AT + M + GV+ D +Y L+ +C ++ A+ L E
Sbjct: 1020 TTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQE 1079
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+ +GF T+++LI G K AR + M + G ++ E ++ D K +
Sbjct: 1080 MKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKR 1139
Query: 327 IDHAINVFESM 337
D ++ + +
Sbjct: 1140 PDTIVDPIDEI 1150
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 171/347 (49%), Gaps = 7/347 (2%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN-RYTDNALRMFRGL 127
++ L + G EA +VF+ M+ L + N+ L L K+ T A+ +FR
Sbjct: 601 FDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREF 660
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
+ G + +YNI+I +C+ GR+ A +L + G+ P+ I+Y+T++ R +
Sbjct: 661 PEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGEL 720
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
+++ MK+KG + + Y ++I +I +L EA + +M+ G+ D + Y TL
Sbjct: 721 DKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTL 780
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHLEYMNKIG 306
++ +CK G + AA EM + D T+T +I G C+ G+ ++ +L E + + G
Sbjct: 781 VDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCR-G 839
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSAS 362
+ ++ + +++ K G I A V M + TY++++ LCK L SA+
Sbjct: 840 LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 899
Query: 363 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+LL K G++ ++V+GL SG EA K+ + A ++
Sbjct: 900 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 946
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 74/188 (39%), Gaps = 40/188 (21%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ +C + G +LN M GI+P+ T+N L+ + L + + +M
Sbjct: 989 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSR 1048
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD GK T+ ++ G C R A
Sbjct: 1049 GVEPD--------------GK---------------------TYENLVKGHCNARNMKEA 1073
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ ++ GF + TY++LIKG K + AR I ++ G A + +
Sbjct: 1074 WFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFD----- 1128
Query: 181 CFRNRKYK 188
F + KYK
Sbjct: 1129 FFSDTKYK 1136
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 199/407 (48%), Gaps = 12/407 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ DA +L +M +AG +P+VVTY +LI G + ++ + ML G
Sbjct: 16 LIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSG 75
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ +YNSL+H L + D+A V Q+++ P T++ ++ C+ R D A
Sbjct: 76 CEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLDQAR 135
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK---ELGDSGHAPNAITYTTIM 178
+ R + G V LV Y I G C+A R +++R+ + E+ +SG P+ +TY T +
Sbjct: 136 GLIREMILRGSVCNLVVYIDCIFGFCEA-RCQSSRYECRDGDEMIESGRIPDVVTYNTFI 194
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ K GLE+L M R G D +C++I+ K R+ +A + M+ G
Sbjct: 195 SGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCV 254
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEME--KQGFECDKYTHTILIDGLCKAGNIKGAR 296
D ++Y+ +++ + +L+ +L+ M+ K G + YTH I LC++G A+
Sbjct: 255 PDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAK 314
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-----VKDSFTYSSMVHN 351
L M + G NL +YN ++D L K G +D A + M D +++++
Sbjct: 315 NILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISG 374
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQ-KAVVDGLRHSGCRREAK 397
CKA RL A +LL+ + + ++DG G ++AK
Sbjct: 375 FCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAK 421
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 177/356 (49%), Gaps = 10/356 (2%)
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
M G V +Y +L+ L + G D A + Q M P T+ +++GLCK R
Sbjct: 1 MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
+A++ + + + G P+LVTYN LI GLC A R+ A +L+EL +G APN ITY+T
Sbjct: 61 PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI---GRLKEATDYMEQMV 233
++ R R+ ++ M +G + Y I F + E D ++M+
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRD-GDEMI 179
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
G D+V+YNT I+ CK GKL+ +L+EM++ G D T +I GLCKA I
Sbjct: 180 ESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRID 239
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME------VKDSFTYSS 347
A + M + G + Y+ ++D L + ++D V E M+ V + +T+++
Sbjct: 240 DAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNA 299
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ LC++ + P A +LL ++SG + V+DGL SG +A K+ K+
Sbjct: 300 FIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKM 355
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 189/389 (48%), Gaps = 51/389 (13%)
Query: 20 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 79
+ M E+G PDVVTYN+ I+G + L L++L+EM GIPPDV ++ S++ L +
Sbjct: 176 DEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKA 235
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ--KHGFVPELV 137
+ D+A +VF+ M+ P + T++IML+ L + D + +Q K G V E+
Sbjct: 236 NRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVY 295
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM----KCCFRNRKYKLGLEI 193
T+N I LC++G+ A+ IL + +SG PN ++Y ++ K + +KL ++
Sbjct: 296 THNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKM 355
Query: 194 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL-DIVSYNTLINLYC 252
L + K D + T+I+ F K GRL +A + +M + + D+V+YNTLI+
Sbjct: 356 LDSGCCKP---DVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQS 412
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K G L+ A LLL EM+ G + + T+ LI+G K G + A + M+ G ++
Sbjct: 413 KFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDII 472
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVK-------------------------------- 340
YN ++ K G + A V++ ++ K
Sbjct: 473 TYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQ 532
Query: 341 ---------DSFTYSSMVHNLCKAKRLPS 360
DS+TY+ ++ L + + +PS
Sbjct: 533 EMTARGWSCDSYTYNVLIAKLAETEEVPS 561
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 175/362 (48%), Gaps = 9/362 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMR--EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
+++D + D +L M+ +AG +V T+N+ I R+ + ++L M+
Sbjct: 262 IMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMI 321
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYT 117
E G P++ SYN ++ L + G D+A ++ + M+ G P FN +++G CK
Sbjct: 322 ESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRL 381
Query: 118 DNALRMFRGLQ-KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
A ++ ++ K+ VP++VTYN LI G K G L+ A+ +L+E+ G PN +TY
Sbjct: 382 SQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAA 441
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM--VT 234
++ ++ Y+ + M KG D Y TV++AF K G + +A +Q+ T
Sbjct: 442 LINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKT 501
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
D ++Y LI+ YC+ E LL EM +G+ CD YT+ +LI L + +
Sbjct: 502 SYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPS 561
Query: 295 ARLHLEYMNKIGFDSNLEA--YNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
L + Y + D A +N +V + G ++ A ++ + M K +S + L
Sbjct: 562 KALAV-YQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKGHLVDASNLEAL 620
Query: 353 CK 354
K
Sbjct: 621 NK 622
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 182/363 (50%), Gaps = 4/363 (1%)
Query: 14 AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 73
A +LN M G + V+Y ++I+G + + + L DEML+ GI PD+ ++N L+
Sbjct: 164 AALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLI 223
Query: 74 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 133
H L + G E+ ++F ++ + P TFNI + GLC+ D A R+ + G
Sbjct: 224 HVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLT 283
Query: 134 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 193
P++++YN LI G CK +L A L ++ +SG PN TY TI+ + + +I
Sbjct: 284 PDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKI 343
Query: 194 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 253
L KG+ D F Y ++I G + A + + G + I+ YNTL+ K
Sbjct: 344 LRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSK 403
Query: 254 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
+G + A L+ +M + G D +T+ ++++GLCK G + A L G ++
Sbjct: 404 QGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFT 463
Query: 314 YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 369
+N ++D K +D AI + ++M D TY+++++ LCKA++L + + L
Sbjct: 464 FNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAML 523
Query: 370 KSG 372
+ G
Sbjct: 524 EKG 526
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 180/374 (48%), Gaps = 4/374 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + + +++ + G+ P++ T+N I G R + + LL+ ++ G
Sbjct: 222 LIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG 281
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV SYN+L+ + K EA M+ + P T+N ++NG CK NA
Sbjct: 282 LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNAD 341
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ R GF+P+ TY+ LI GLC G + A + E + G + I Y T++K
Sbjct: 342 KILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGL 401
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ L+++ M G + D + Y V+ K+G L +A + + G DI
Sbjct: 402 SKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDI 461
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++NTLI+ YCK+ ++ A +LD M G D T+ L++GLCKA + +
Sbjct: 462 FTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKA 521
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M + G N+ YN +++ KD K+ A+ +F+ M+ + D T +++ LC
Sbjct: 522 MLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581
Query: 358 LPSASKLLLSCLKS 371
L A +L ++ K
Sbjct: 582 LDKAYELFVTIEKE 595
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 177/355 (49%), Gaps = 4/355 (1%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
Y + + M + GI PD++T+N LI + + S L ++++ G+ P+++++N +
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
L + G DEA R+ + ++ LTP ++N ++ G CK+ A + G P
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
TYN +I G CKAG ++ A IL++ G P+ TY++++ + + +
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
KG+ Y T++ K G + +A M+ M+ G DI +YN ++N CK
Sbjct: 380 YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKM 439
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
G L A +L++ +G D +T LIDG CK N+ A L+ M G ++ Y
Sbjct: 440 GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITY 499
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
N +++ L K K+D+ ++ F++M K + TY+ ++ + CK +++ A +L
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELF 554
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 188/413 (45%), Gaps = 40/413 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ I C+ + D +L + G++PDV++YN+LI G ++S L + L +M+
Sbjct: 256 IFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNS 315
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ ++YN++++ + G A+++ +D + P T++ ++NGLC + + A
Sbjct: 316 GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRA 375
Query: 121 LRMF-------------------RGLQKHGFV----------------PELVTYNILIKG 145
+ +F +GL K G V P++ TYN+++ G
Sbjct: 376 MAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNG 435
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCK G L A IL + G P+ T+ T++ + R +EIL M G T D
Sbjct: 436 LCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPD 495
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y T++ K +L D + M+ G +I++YN LI +CK+ K+ A L
Sbjct: 496 VITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFK 555
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
EM+ +G D T LI GLC G + K L + + F + +N +++ +
Sbjct: 556 EMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEK 615
Query: 325 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ A +F M D++TY M+ + CK + A LL + G+
Sbjct: 616 LNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGL 668
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 176/360 (48%), Gaps = 6/360 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ RM P V +YN+++ S + + M ++GI PDV+++ M
Sbjct: 98 VFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFC 157
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
G+P A R+ +M ++ +++G K A +F + K G P+++
Sbjct: 158 ITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDIL 217
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T+N LI LCK G ++ + + ++ G PN T+ ++ R +L ++
Sbjct: 218 TFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESI 277
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+G T D Y T+I F K +L EA Y+ +MV GV+ + +YNT+IN +CK G +
Sbjct: 278 VSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMM 337
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNC 316
+ A +L + +GF D++T++ LI+GLC G++ A + E M K GF ++ YN
Sbjct: 338 QNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK-GFKHSIILYNT 396
Query: 317 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
+V L K G + A+ + + M D +TY+ +V+ LCK L A+ +L + G
Sbjct: 397 LVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKG 456
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 178/377 (47%), Gaps = 5/377 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ +C+ IL G PD TY+SLI G + ++ ++ + E +E G
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ YN+L+ L + G +A ++ +DM+ +P T+N+++NGLCK +A
Sbjct: 387 FKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDAN 446
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ G +P++ T+N LI G CK + A IL + G P+ ITY T++
Sbjct: 447 GILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGL 506
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ RK ++ AM KG T + Y +I +F K ++ EA + ++M T G+ DI
Sbjct: 507 CKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDI 566
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQ-GFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+ TLI C G+L+ AY L +EK+ F I+I+ C+ N+ A
Sbjct: 567 VTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFH 626
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN-VFESME--VKDSFTYSSMVHN-LCKAK 356
M + Y ++D K G ID A + E++ + SFT V N LC
Sbjct: 627 KMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTH 686
Query: 357 RLPSASKLLLSCLKSGV 373
RL A ++ +++G+
Sbjct: 687 RLSEAVVIINLMVQNGI 703
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 90/242 (37%), Gaps = 71/242 (29%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ + D IL+ M GI+PDV+TYN+L+ G + L +D MLE G
Sbjct: 467 LIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKG 526
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTP---------------------- 99
P++ +YN L+ + K EA +F++M LTP
Sbjct: 527 CTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAY 586
Query: 100 --------------CTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI-- 143
TA FNIM+N C+ A ++F + P+ TY ++I
Sbjct: 587 ELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDS 646
Query: 144 -------------------KGL--------------CKAGRLRTARWILKELGDSGHAPN 170
KGL C RL A I+ + +G P
Sbjct: 647 YCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706
Query: 171 AI 172
+
Sbjct: 707 EV 708
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 176/368 (47%), Gaps = 5/368 (1%)
Query: 9 FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 68
F + D + NRM P V +N L+ + L ++M GIPPDV++
Sbjct: 47 FNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYT 106
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
N L++ L + A V ++ P TATF ++ GLC +AL +F +
Sbjct: 107 LNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMI 166
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
GF P +VTY LI GLCK G A +L+ + P+ + YT+I+ ++R+
Sbjct: 167 GEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVT 226
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
+ S M +G + D F Y ++I + + K T + QM+ + D+V ++T++
Sbjct: 227 EAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVV 286
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
+ CKEGK+ A+ ++D M +G E + T+ L+DG C + A + M G+
Sbjct: 287 DALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYA 346
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKL 364
N+ +YN +++ K ++D A +FE M + ++ TY++++H C RL A L
Sbjct: 347 PNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIAL 405
Query: 365 LLSCLKSG 372
+ G
Sbjct: 406 FHEMVAHG 413
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 186/405 (45%), Gaps = 40/405 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID+ C+ + + ++M GISPD+ TY SLI LL++M+
Sbjct: 215 IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK 274
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV +++++ L + GK EA+ V MI + P T+N +++G C D A+
Sbjct: 275 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAV 334
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + +G+ P +++YN LI G CK R+ A ++ +E+ PN +TY T+M C
Sbjct: 335 KVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXC 394
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+GRL++A +MV G D+
Sbjct: 395 ------------------------------------HVGRLQDAIALFHEMVAHGQIPDL 418
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y L++ CK+ L+ A LL +E + D +TI+IDG+C+AG ++ AR
Sbjct: 419 ATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSN 478
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
++ G N+ Y +++ L + G +D A +F M+ D TY+++ L + K
Sbjct: 479 LSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKE 538
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 402
A +LL L G S +V+ L + K+I S+
Sbjct: 539 ALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSE 583
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 192/392 (48%), Gaps = 5/392 (1%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
+++ N+M GI PDV T N LI + L + +L ++L++G PD ++ +L+
Sbjct: 89 FSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRG 148
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
L GK +A +F MI P T+ ++NGLCK T+ A+R+ R +++ P+
Sbjct: 149 LCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPD 208
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
+V Y +I LCK ++ A + ++ G +P+ TYT+++ ++K +L+
Sbjct: 209 VVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLN 268
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M D + TV+ A K G++ EA D ++ M+ GV+ ++V+YN L++ +C +
Sbjct: 269 QMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQS 328
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
+++ A + D M G+ + ++ LI+G CK + A E M + N YN
Sbjct: 329 EMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYN 388
Query: 316 CIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++ G++ AI +F M ++ D TY ++ LCK L A LL + S
Sbjct: 389 TLM-HXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGS 447
Query: 372 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ V+DG+ +G A+ I S +
Sbjct: 448 NMDPDIQIYTIVIDGMCRAGELEAARDIFSNL 479
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 191/403 (47%), Gaps = 5/403 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+++C +++L ++ + G PD T+ +LI G + +L L D+M+
Sbjct: 109 ILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGE 168
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V +Y +L++ L ++G + A R+ + M G+ P + +++ LCK+R A
Sbjct: 169 GFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEA 228
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G P++ TY LI LC + +L ++ +S P+ + ++T++
Sbjct: 229 FNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDA 288
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K +++ M +G + Y ++ + EA + MV +G +
Sbjct: 289 LCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPN 348
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++SYNTLIN YCK +++ A L +EM ++ + T+ L+ C G ++ A
Sbjct: 349 VISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFH 407
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M G +L Y ++D L K +D A+ + +++E D Y+ ++ +C+A
Sbjct: 408 EMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAG 467
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L +A + + G+R +++GL G EA K+
Sbjct: 468 ELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKL 510
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 81/162 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ D +L + + + PD+ Y +I G R L + D+ +
Sbjct: 423 ILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSK 482
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V +Y +++ L + G DEAN++F +M +P T+N + GL +N+ A
Sbjct: 483 GLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRA 542
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
+++ + + GF ++ T +L++ LC ++ + IL E
Sbjct: 543 IQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEF 584
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 200/420 (47%), Gaps = 25/420 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + F T+L M+E I P+VVT+ LI N L C +DE LE+
Sbjct: 311 LLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILI-----NHL--CKFRRVDEALEVF 363
Query: 62 ------------IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL-TPCTATFNIML 108
+ PDV +YN+L+ L ++G+ +E + + M P T T+N ++
Sbjct: 364 EKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLI 423
Query: 109 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
+G CK + A +F + K G P +VT N L+ G+CK GR+ A E+ G
Sbjct: 424 DGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLK 483
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
NA+TYT +++ + +E+ M G + D Y T+I+ + G+L A+
Sbjct: 484 GNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFV 543
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+ +M G DIVS+N LIN +C++ KL+ AY +L EME G + D T+ LI K
Sbjct: 544 LSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSK 603
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-----VKDSF 343
G+ A ++ M K G + Y ++ +G +D A+ +F M ++
Sbjct: 604 TGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTV 663
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
Y+ ++++LC+ ++ A L+ GV+ + A+ GL+ +A ++ ++
Sbjct: 664 IYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRM 723
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 186/392 (47%), Gaps = 10/392 (2%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
++++ E + P+ + LI+ R+ + D+L ++++G + S N+L+ L
Sbjct: 257 LVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALG 316
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR---GLQKHGFV- 133
+ + N + +M D+ P TF I++N LCK R D AL +F G + +GF+
Sbjct: 317 RAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLV 376
Query: 134 -PELVTYNILIKGLCKAGRLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGL 191
P+++TYN LI GLCK GR +++ + PN +TY ++ + +
Sbjct: 377 EPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAAR 436
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
E+ M + G + T++ K GR+ A ++ +M G++ + V+Y LI +
Sbjct: 437 ELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAF 496
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
C +E A L DEM + G D + LI GL +AG + A L M + GF ++
Sbjct: 497 CNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDI 556
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
++N +++ + K+D A + + ME D TY++++ + K +A +L+
Sbjct: 557 VSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKK 616
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+K G+ A++ +G EA KI
Sbjct: 617 MVKEGLVPTVVTYGALIHAYCLNGNLDEAMKI 648
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 130/290 (44%), Gaps = 1/290 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+ + N M+ G+ + VTY +LI + + +++L DEMLE G
Sbjct: 457 LVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAG 516
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD Y +L+ L Q GK D A+ V M +P +FN+++NG C+ D A
Sbjct: 517 CSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAY 576
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + ++ G P+ VTYN LI K G TA ++K++ G P +TY ++
Sbjct: 577 EMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAY 636
Query: 182 FRNRKYKLGLEILSAMKRKG-YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
N ++I M + Y +I + + ++ A M+ M GV+ +
Sbjct: 637 CLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPN 696
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
++N + ++ L A+ L+D M + D T IL + L G
Sbjct: 697 TNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVG 746
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 166/359 (46%), Gaps = 20/359 (5%)
Query: 70 NSLMHCLFQLGKPDEANRVFQDMIC--GDLTPCTATFNIMLNGLCKNRYTDNALR----- 122
N L+ LF+ G+ D+A + +M+ + P + T +I+ + L K A+
Sbjct: 196 NILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIV 255
Query: 123 -MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ +H P + LI LC++GR A +L L G A + ++
Sbjct: 256 GLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTAL 315
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM---VTDG-- 236
R R++K +L+ MK + + +I K R+ EA + E+M ++G
Sbjct: 316 GRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFL 375
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHTILIDGLCKAGNIKG 294
V+ D+++YNTLI+ CK G+ E L++ M Q C + T+ LIDG CKA I+
Sbjct: 376 VEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQP-RCMPNTVTYNCLIDGYCKASMIEA 434
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 350
AR + MNK G N+ N +VD + K G+I+ A+ F M+ K ++ TY++++
Sbjct: 435 ARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIR 494
Query: 351 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
C + A +L L++G ++ GL +G A + SK++ A S
Sbjct: 495 AFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFS 553
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 1/174 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ D Y +L M AGI PD VTYN+LI+ ++ S + L+ +M++
Sbjct: 561 VLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKE 620
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTDN 119
G+ P V +Y +L+H G DEA ++F+DM + P T +NI++N LC+ D
Sbjct: 621 GLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDL 680
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
AL + ++ G P T+N + KGL + L A ++ + + P+ IT
Sbjct: 681 ALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYIT 734
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI++ C+ D ++++ M+ G+ P+ T+N++ G + LS + +L+D M E
Sbjct: 667 ILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEH 726
Query: 61 GIPPDVWSYNSLMHCLFQLGK 81
PD + L L +G+
Sbjct: 727 ACNPDYITMEILTEWLSAVGE 747
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 127/413 (30%), Positives = 192/413 (46%), Gaps = 44/413 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI A Q +L M G PDV T+N +I G + + + + L+D ML G
Sbjct: 259 LIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRG 318
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD------------------------- 96
PD +Y L+H L ++GK +EA ++ + C +
Sbjct: 319 FYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLN 378
Query: 97 -------LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
P T+NI+++GLCK A + + + G P ++TY IL+ GLCKA
Sbjct: 379 ETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKA 438
Query: 150 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 209
G L A +L E+ G N++ Y ++ R K + L +LS M KG D F Y
Sbjct: 439 GLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTY 498
Query: 210 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
++I K+ R+ EA M+ DG + V+YNTLI+ + G + A L+++M
Sbjct: 499 NSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLF 558
Query: 270 QGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
+G DK T+ LI CK GNI KG L+ E M G ++ + N +++ L K GK+D
Sbjct: 559 RGCTLDKITYNGLIKAFCKVGNIEKGLELY-EQMIMDGLGADTISCNIMINGLCKVGKVD 617
Query: 329 HAINVFESME-------VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
+A FE + V D TY+S+++ LCK R+ A L GVR
Sbjct: 618 NA---FEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVR 667
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 178/358 (49%), Gaps = 5/358 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNR-MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
LI+ Y + LN M G PD+ TYN L+ G + LS + DL++EM
Sbjct: 360 LINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRR 419
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V +Y L++ L + G +EA V +M LT + +N ++ LC+ A
Sbjct: 420 GCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVA 479
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + G P+L TYN LI GLCK R+ A + + G N +TY T++
Sbjct: 480 LNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHA 539
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R ++ L +++ M +G T D Y +I AF K+G +++ + EQM+ DG+ D
Sbjct: 540 LLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGAD 599
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+S N +IN CK GK++ A+ L + +GF D T+ +++GLCK G IK A +
Sbjct: 600 TISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFD 659
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCK 354
+ G + YN + K+G ++ A + F E+ V + T++ +V+ L K
Sbjct: 660 RLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLK 717
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 196/401 (48%), Gaps = 52/401 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C V+ + Y +L++ G+SP V T+ ++ + + + LL +M +
Sbjct: 192 ILVTGNCPQVATNVFYDMLSK----GVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKH 247
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ Y +L+H L Q + EA ++ ++M P TFN +++GLCK +A
Sbjct: 248 GCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDA 307
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + GF P+ +TY L+ GLC+ G+L AR IL ++ +A
Sbjct: 308 TKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNA------------ 355
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM-EQMVTDGVQL 239
IL+ T+I +V G+LKEA ++ E M+ G Q
Sbjct: 356 ------------ILN---------------TLINGYVMSGQLKEAQSFLNETMINFGFQP 388
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DI +YN L++ CKEG L A L++EM ++G E + T+ IL++GLCKAG ++ A L L
Sbjct: 389 DIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVL 448
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
M+ G N YNC++ L + K+ A+N+ M K D FTY+S+++ LCK
Sbjct: 449 HEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKV 508
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
R+ A +L + L G A + L H+ RR A
Sbjct: 509 DRIDEAFRLFHNMLLDGA----VANNVTYNTLIHALLRRGA 545
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 185/396 (46%), Gaps = 9/396 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ A C F D+ ++L M + G P+ + Y +LI ++ + +S +L LL+EM M
Sbjct: 223 IVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVM 282
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV ++N ++H L ++ K +A ++ M+ P T+ +L+GLC+ + A
Sbjct: 283 GCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEA 342
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE-LGDSGHAPNAITYTTIMK 179
++ + P N LI G +G+L+ A+ L E + + G P+ TY +M
Sbjct: 343 RKILIKIP----CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMH 398
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ ++++ M R+G + Y ++ K G L+EA + +M G+ +
Sbjct: 399 GLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTI 458
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ V YN LI C++ K+ A LL EM +G + D +T+ LI GLCK I A
Sbjct: 459 NSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLF 518
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
M G +N YN ++ L + G A+ + M + D TY+ ++ CK
Sbjct: 519 HNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKV 578
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ +L + G+ + +++GL G
Sbjct: 579 GNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVG 614
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 180/377 (47%), Gaps = 39/377 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M+ID C+ D Y + M GISPDVVTY+ L++G L+ ++DLL+EM+
Sbjct: 203 MIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLE 262
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PD+++Y L+ L + GK EA V M+ + ++ +++G C +NA
Sbjct: 263 NINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNA 322
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+F + + G P++ Y+I+I GLCK R+ A + +E+ P+ +TYT+
Sbjct: 323 KRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTS---- 378
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+I K GR+ D ++M+ G D
Sbjct: 379 -------------------------------LIDCLCKSGRISYVWDLFDEMLDRGQPPD 407
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++YN LI+ CK G L+ A L ++M+ Q + YT TIL+DGLCK G +K A +
Sbjct: 408 VITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQ 467
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ G+ N+ Y +++ L K+G +D A+ + ME + D+ T+ M+
Sbjct: 468 DLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKD 527
Query: 357 RLPSASKLLLSCLKSGV 373
A KL+ + G+
Sbjct: 528 ENDKAEKLVREMIARGL 544
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 198/408 (48%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ +C F ++ ++++ + G P+ +T N+L+ G + +L D++L
Sbjct: 98 IIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQ 157
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G SY L++ + ++G+ A R+ + + + P ++++++ LCK+ D A
Sbjct: 158 GFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEA 217
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G P++VTY+IL+ G C G+L A +L E+ P+ TYT ++
Sbjct: 218 YDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDA 277
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K K +L+ M + D Y T++ + + + A M GV D
Sbjct: 278 LCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPD 337
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ Y+ +IN CK +++ A L +E+ ++ D T+T LID LCK+G I +
Sbjct: 338 VHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFD 397
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G ++ YN ++D L K+G +D AI +F M+ + + +T++ ++ LCK
Sbjct: 398 EMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVG 457
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
RL +A + L G + +++GL G EA +QS++
Sbjct: 458 RLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRME 505
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 179/396 (45%), Gaps = 4/396 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D + N M +P +N ++ ++ L +M + PD ++ N +
Sbjct: 40 DDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNII 99
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
++C G+ A ++ P T T N ++ GLC ALR + GF
Sbjct: 100 INCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGF 159
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
++Y ILI G+CK G R A +L+ + PN + Y+ I+ ++ +
Sbjct: 160 RLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYD 219
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ + M KG + D Y +++ F +G+L A D + +MV + + DI +Y L++ C
Sbjct: 220 LYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALC 279
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
KEGK++ A +L M K D ++ L+DG C + A+ M ++G ++
Sbjct: 280 KEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVH 339
Query: 313 AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
Y+ +++ L K ++D A+N+FE + V D+ TY+S++ LCK+ R+ L
Sbjct: 340 CYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEM 399
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
L G ++D L +G A + +K++
Sbjct: 400 LDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMK 435
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 134/508 (26%), Positives = 215/508 (42%), Gaps = 117/508 (23%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C + L+ M+ G+SPD VTYN+L+ R +L + LL M
Sbjct: 213 LLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRD 272
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC-------- 112
GI P +YN+L+ +LG +A +V + M P T+N++ GLC
Sbjct: 273 GIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEA 332
Query: 113 ----------------------------KNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
K R + +ALR+ ++ G P LVT+NI++K
Sbjct: 333 FRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVK 392
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK--CCFRN------------------ 184
LCK G+L A L+++ + G AP+ ITY T++ C N
Sbjct: 393 SLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKM 452
Query: 185 ---------------RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK----------- 218
++Y+ E+L + ++G+ D Y TV+AA+ K
Sbjct: 453 DTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLW 512
Query: 219 ------------------------IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
+ RLKEA D + ++V G+ D +YN +I+ YCKE
Sbjct: 513 DQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKE 572
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
G LE A+ ++M + F+ D T L++GLC G + A E + G ++ Y
Sbjct: 573 GDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITY 632
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
N ++ + K G +D A++ F+ MEVK D+FTY+ ++ L +A R A +L
Sbjct: 633 NTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLAD 692
Query: 371 SG-------VRILKSAQKAVVDGLRHSG 391
SG +LK + D H G
Sbjct: 693 SGKLSQSFACPLLKPSSADEADVKEHEG 720
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 182/365 (49%), Gaps = 5/365 (1%)
Query: 14 AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 73
A + + E + P+ T+N L+ L+ +L L M G+ PD +YN+L+
Sbjct: 191 ASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLL 250
Query: 74 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 133
+ + G EA + M + P T+N +++ + + A ++ + +GF
Sbjct: 251 NAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFE 310
Query: 134 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHA-PNAITYTTIMKCCFRNRKYKLGLE 192
P+L TYN+L GLC+AG++ A + E+ A P+ +TY T++ CF+ R L
Sbjct: 311 PDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALR 370
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+L M+ KG + V+ + K G+L+EA +E++ +G+ D+++YNTLI+ YC
Sbjct: 371 LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYC 430
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K G + A+ L+DEM +G + D +T ++ LCK + A L + GF +
Sbjct: 431 KAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEV 490
Query: 313 AYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
+Y ++ K+ + A+ +++ M + TY++++ LC+ +RL A L
Sbjct: 491 SYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEL 550
Query: 369 LKSGV 373
++ G+
Sbjct: 551 VEKGL 555
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 187/397 (47%), Gaps = 15/397 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ + C+ + L ++ E G++PDV+TYN+LI + ++ + L+DEM+
Sbjct: 389 IVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGK 448
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ D ++ N++++ L ++ + ++A + P ++ ++ K + A
Sbjct: 449 GLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPA 508
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
LR++ + + +P + TYN LIKGLC+ RL+ A L EL + G P+ TY I+
Sbjct: 509 LRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHA 568
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + M + D T++ G+L +A E V G ++D
Sbjct: 569 YCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVD 628
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++YNTLI CK G ++ A D+ME +G + D +T+ +++ L +AG + A L
Sbjct: 629 VITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLH 688
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHA--------INVFESMEVKDSF--TYSSMVH 350
+ G S +++ C L K D A S + +D+ TY ++
Sbjct: 689 KLADSGKLS--QSFAC---PLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLN 743
Query: 351 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
LC +L A +L ++ G+ + S +++GL
Sbjct: 744 GLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGL 780
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 157/321 (48%), Gaps = 11/321 (3%)
Query: 61 GIPPDVWSYNSLMHCLFQLGK--PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G+ P + + N+++ L + P + VF+ +I L P TFN++++ C
Sbjct: 166 GVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLA 225
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
+AL +Q G P+ VTYN L+ C+ G L AR +L + G AP TY T++
Sbjct: 226 DALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLV 285
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA---TDYMEQMVTD 235
R K +++ +M G+ D Y + + G++ EA D ME++ T
Sbjct: 286 SAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLST- 344
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
D+V+YNTL++ K A LL+EM +G + TH I++ LCK G ++ A
Sbjct: 345 -ALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEA 403
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 351
LE + + G ++ YN ++D K G + A + + M K D+FT +++++N
Sbjct: 404 LGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYN 463
Query: 352 LCKAKRLPSASKLLLSCLKSG 372
LCK KR A +LL S + G
Sbjct: 464 LCKMKRYEDAEELLHSPPQRG 484
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 167/361 (46%), Gaps = 5/361 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LIDAYC+ + +T+++ M G+ D T N+++ + + +LL + G
Sbjct: 425 LIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRG 484
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD SY ++M F+ P+ A R++ MI L P +T+N ++ GLC+ A+
Sbjct: 485 FVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAI 544
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
L + G VP+ TYNI+I CK G L A ++ ++ P+ +T T+M
Sbjct: 545 DKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGL 604
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K L++ + KG D Y T+I + K+G + A + + M G+Q D
Sbjct: 605 CLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDA 664
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN +++ + G+ E A+ +L ++ G + +L ++K E
Sbjct: 665 FTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEA 724
Query: 302 -MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
++ D+ LE Y ++ L G++ A V + M K DS TY +++ L K +
Sbjct: 725 ESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQ 784
Query: 357 R 357
+
Sbjct: 785 K 785
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 36/189 (19%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C D + E G DV+TYN+LI + + +L D+M G
Sbjct: 600 LMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKG 659
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEAN----------RVFQDMICGDLTPCTA--------- 102
+ PD ++YN ++ L + G+ +EA+ ++ Q C L P +A
Sbjct: 660 LQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHE 719
Query: 103 -----------------TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
T+ LNGLC A + + + G + TY L++G
Sbjct: 720 GKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEG 779
Query: 146 LCKAGRLRT 154
L K + +T
Sbjct: 780 LIKRQKRQT 788
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 196/397 (49%), Gaps = 4/397 (1%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
S + + M G++P+V TYN LI +L +L +M G P+V +YN
Sbjct: 130 SLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYN 189
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+L+ F+ G+ D A R+ M+ G L P TFN M+NG+CK ++A ++F + +
Sbjct: 190 TLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMRE 249
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G P+ V+YN L+ G CKAG A + E+ G P+ +T+T+++ + +
Sbjct: 250 GLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWA 309
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+ ++ M+ +G + + +I F K G L +A + M ++ +V YN LIN
Sbjct: 310 VTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALING 369
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
YC G+++ A LL EME +G + D T++ +I CK + A + M + G +
Sbjct: 370 YCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPD 429
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLL 366
Y+ ++ L ++ ++ A +F++M D FTY+S++ CK + A L
Sbjct: 430 AITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHD 489
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+K+GV +++GL S EA+++ K+
Sbjct: 490 KMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKL 526
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 204/421 (48%), Gaps = 19/421 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ + + + M G++PD V+YN+L+ G + +L + EM + G
Sbjct: 226 MVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 285
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV ++ SL+H + + G + A + + M L TF +++G CK + D+AL
Sbjct: 286 IMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDAL 345
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
RG+++ P +V YN LI G C GR+ AR +L E+ G P+ +TY+TI+
Sbjct: 346 LAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAY 405
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N E+ M KG D Y ++I + RL +A + M+ G+Q D
Sbjct: 406 CKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDE 465
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHLE 300
+Y +LI+ +CKEG +E A L D+M K G D T+++LI+GL K+ ++ +L +
Sbjct: 466 FTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFK 525
Query: 301 YMNKIGFDSN--------------LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
++ +N L++ ++ G ++ A V++SM + D
Sbjct: 526 LYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDG 585
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 402
YS ++H C+A + A L+ G ++ +++ GL +G EA ++ +
Sbjct: 586 SVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQ 645
Query: 403 I 403
+
Sbjct: 646 L 646
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 185/387 (47%), Gaps = 5/387 (1%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G P V+ YN+++ + SL S D ML G+ P+V++YN L+ L G EA
Sbjct: 111 GYVPSVLAYNAVLLALSDASLTSAR-RFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+ +DM P T+N ++ + D A R+ + G P LVT+N ++ G
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
+CKAG++ AR + E+ G AP+ ++Y T++ + L + + M +KG D
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ ++I K G L+ A + QM G+Q++ V++ LI+ +CK+G L+ A L +
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M + + + LI+G C G + AR L M G ++ Y+ I+ K+
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 409
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
A + + M K D+ TYSS++ LC+ KRL A L + +K G++ +
Sbjct: 410 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYT 469
Query: 382 AVVDGLRHSGCRREAKKIQSKIRMAKI 408
+++DG G A + K+ A +
Sbjct: 470 SLIDGHCKEGNVERALSLHDKMVKAGV 496
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 150/326 (46%), Gaps = 25/326 (7%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC D +L+ M G+ PDVVTY+++I+ +N + +L +MLE G
Sbjct: 366 LINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 425
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y+SL+ L + + +A+ +F++MI L P T+ +++G CK + AL
Sbjct: 426 VLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERAL 485
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K G +P++VTY++LI GL K+ R A+ +L +L P Y +M CC
Sbjct: 486 SLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCC 545
Query: 182 FRNRKYKLGLEILSAMKRKG----------------YTFDGFGYCTVIAAFVKIGRLKEA 225
R + K L +L KG + DG Y +I + G + +A
Sbjct: 546 -RKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKA 604
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC----DKYTHTI 281
+ +QM+ G + S +LI + G + A D++ +Q C D
Sbjct: 605 LSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEA----DQVIQQLLNCCSLADAEASKA 660
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGF 307
LID GN+ L M K G
Sbjct: 661 LIDLNLNEGNVDAVLDVLHGMAKDGL 686
>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
Length = 663
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 171/358 (47%), Gaps = 4/358 (1%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
TYN LI G + DL EM GI P V +YN+++H L Q G+ + A F +M
Sbjct: 304 TYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEM 363
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
L P T+N +LNG CK AL +F L++ G P ++TYNILI G C+ G L
Sbjct: 364 RAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDL 423
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
AR + +E+ + G P+ TYT +MK + E M KG D F Y T
Sbjct: 424 EEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTR 483
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I A + +G + ++ E ++ +G+ D V+YN LI+ CK G L+ A L+ +M G
Sbjct: 484 ICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGL 543
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
+ D T+T LI C+ G ++ AR M G + Y I+ + G + A
Sbjct: 544 QPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYG 603
Query: 333 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
F M + + TY+ ++H LC+ R A + L+ G+ K ++DG
Sbjct: 604 WFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLIDG 661
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 159/332 (47%), Gaps = 4/332 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M GI P VVTYN++I G ++ + + EM MG+ PDV +YNSL++ + G
Sbjct: 328 MENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGN 387
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
EA +F D+ L P T+NI+++G C+ + A R+ + + G +P++ TY I
Sbjct: 388 QKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTI 447
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
L+KG L R E+ G P+ Y T + ++ + +G
Sbjct: 448 LMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEG 507
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ D Y +I K G LK+A + M QM+++G+Q D ++Y LI+ +C+ G L A
Sbjct: 508 ISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREAR 567
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
++M G T+T++I C+ GN+ A M + G + N YN ++ L
Sbjct: 568 KFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHAL 627
Query: 322 GKDGKID----HAINVFESMEVKDSFTYSSMV 349
+ G+ H + E V + +TY+ ++
Sbjct: 628 CRMGRTQLAYRHFYEMLERGLVPNKYTYTLLI 659
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 139/285 (48%), Gaps = 35/285 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID YC+ + + M E G PDV TY L+ G+ L+ + + DEML
Sbjct: 412 ILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSK 471
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD ++YN+ + LG ++ ++ + ++ ++ T T+NI+++GLCK +A
Sbjct: 472 GLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDA 531
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + +G P+ +TY LI C+ G LR AR ++ G P+A+TYT I
Sbjct: 532 EELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVI--- 588
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
I A+ + G L A + +M+ +GV+ +
Sbjct: 589 --------------------------------IHAYCRRGNLYSAYGWFRKMLEEGVEPN 616
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
++YN LI+ C+ G+ + AY EM ++G +KYT+T+LIDG
Sbjct: 617 EITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLIDG 661
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 189/456 (41%), Gaps = 87/456 (19%)
Query: 17 TILNRMREAGISPDVVTYNSLIA---GATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 73
+ M G++PDV N ++ A R +S + EML++GI P + +YN+L+
Sbjct: 182 SAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSA---VHAEMLQLGIEPSIVTYNTLL 238
Query: 74 HCLFQLGKPDEANRVFQDMIC--GDLTPCTATFNIMLNGLCKNRY--------------- 116
+ G+ D+ + + ++M P T+N+++ GL + Y
Sbjct: 239 DSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSK 298
Query: 117 -----TDNAL---RMFRG-----------LQKHGFVPELVTYNILIKGLCKAGRLRTARW 157
T N L + RG ++ G +P +VTYN +I GL ++G++ A+
Sbjct: 299 KASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQA 358
Query: 158 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 217
E+ G P+ ITY +++ + K L + ++R G Y +I +
Sbjct: 359 KFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYC 418
Query: 218 KIGRLKEA-----------------------------------TDYMEQMVTDGVQLDIV 242
++G L+EA ++ ++M++ G++ D
Sbjct: 419 RLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCF 478
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
+YNT I G + ++ L + + +G D T+ ILIDGLCK GN+K A + M
Sbjct: 479 AYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQM 538
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD-----SFTYSSMVHNLCKAKR 357
G + Y C++ + G + A F M + D + TY+ ++H C+
Sbjct: 539 ISNGLQPDCITYTCLIHAHCERGFLREARKFFNDM-ISDGLPPSAVTYTVIIHAYCRRGN 597
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 393
L SA L+ GV + + L H+ CR
Sbjct: 598 LYSAYGWFRKMLEEGVE----PNEITYNVLIHALCR 629
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 96/233 (41%), Gaps = 42/233 (18%)
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
V+ R + + +M+ G++ IV+YNTL++ + KEG+ + +LL EME +G
Sbjct: 202 VLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEGRKDKIDMLLKEMEARG 261
Query: 272 FEC------------------------------------DKYTHTILIDGLCKAGNIKGA 295
C +T+ LI GL G +K
Sbjct: 262 SSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKASSFTYNPLITGLLARGFVKKV 321
Query: 296 R-LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVH 350
L LE N+ G + YN ++ L + G+I+ A F M + D TY+S+++
Sbjct: 322 DDLQLEMENE-GIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLN 380
Query: 351 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
CKA A L ++G+ ++DG G EA++++ ++
Sbjct: 381 GYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEM 433
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 198/401 (49%), Gaps = 5/401 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
+ Y +L M AG +PDV +N ++ G R++ + + ++ M+E G PD SY+ L
Sbjct: 27 EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 86
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+H L ++GK DE+ ++ +M+ TP ++ ++ L K R D+A +F + + G
Sbjct: 87 IHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGH 146
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P+ + + LI GLC+AG+++ A K++ G PN Y ++ + + +
Sbjct: 147 HPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANT 206
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ + MK + D Y T++ A K R++E E M G ++++++TLI+ C
Sbjct: 207 LFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLC 266
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
+ G+LE A + M + G + +KYT+T LI GLC+A + AR E M + +
Sbjct: 267 RTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAV 326
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLLLS 367
AYN ++ K G +D A ++ M T+++++ CK +L A++L+
Sbjct: 327 AYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAE 386
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
G+ + ++ GL + EA ++ ++R K
Sbjct: 387 MGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKF 427
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 180/378 (47%), Gaps = 5/378 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + D IL+ M G +P + Y+SL+ + + + L DEM+
Sbjct: 85 ILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRG 144
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD + L+ L Q GK +A+ F+ M P +N++L+GLC + + A
Sbjct: 145 GHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQA 204
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F ++ H P++VTYN L+ +CKA R+ + + + +G+ PN IT++T++
Sbjct: 205 NTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHG 264
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + + LE+ +M G + + Y T+I+ + ++ +A + E+M + D
Sbjct: 265 LCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPD 324
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEME-KQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
V+YN+LI YCK G ++ A L EM G + T LIDG CK G + A +
Sbjct: 325 AVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELV 384
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
M G ++ Y ++ L + K+D A+ V++ M K D + S V LCK
Sbjct: 385 AEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKT 444
Query: 356 KRLPSASKLLLSCLKSGV 373
+ A + + KSG
Sbjct: 445 GNIDQAYAVFEATRKSGA 462
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 181/347 (52%), Gaps = 4/347 (1%)
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
M + I +V++Y+S++ L + KP+E+ +V ++M+ P FN ++ G ++
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
+ A +++ + + G+ P+ V+Y+ILI GL K G+L + IL E+ G P+ Y++
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
+++ + R+ + M R G+ D + +I + G++K+A++ +QM G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
Q ++ YN L++ C G+LE A L EM+ D T+ L+D +CKA ++
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EV---KDSFTYSSMVHNL 352
E M G+ N+ ++ ++ L + G+++ A+ VF SM E + +TY++++ L
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
C+A+++ A +L ++ + A +++ G G EA+K+
Sbjct: 301 CRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKL 347
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 165/319 (51%), Gaps = 3/319 (0%)
Query: 2 LIDAYCQFVSFDAGY---TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
LID +C+ S Y IL M I P+ +T+N+LI G ++ + + + +EM
Sbjct: 241 LIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQ 300
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G+ P++ +YNSL++ L GK DEA ++ M+ L P TFN ++NG CK +
Sbjct: 301 RQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIK 360
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A ++F + + VP +T+N +I CKAG + + + D G PN TY ++
Sbjct: 361 EARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLI 420
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
RN+ + ++L+ M+ D Y +I + K G +A + +M+ GV+
Sbjct: 421 AGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVK 480
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+ V+YNTL++ YC EG L+AA + +MEK+G + T+ +LI G CK G ++ A
Sbjct: 481 PNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRL 540
Query: 299 LEYMNKIGFDSNLEAYNCI 317
L M + G + N Y+ +
Sbjct: 541 LNEMLEKGLNPNRTTYDVV 559
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 175/354 (49%), Gaps = 7/354 (1%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCL-FQLGKPD 83
I P++ T+N I G + L+ + D+++++ G P++ +YN+L+ HC GK
Sbjct: 196 IQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMY 255
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
A+ + ++M+ + P TFN +++G CK+ A F +Q+ G P +VTYN LI
Sbjct: 256 RADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLI 315
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
GL G+L A + ++ G PN +T+ ++ + + K ++ + +
Sbjct: 316 NGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLV 375
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
+ + T+I AF K G ++E M+ +G+ ++ +YN LI C+ + AA L
Sbjct: 376 PNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKL 435
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
L+EME + D T+ ILI G CK G A L M +G N YN ++D
Sbjct: 436 LNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCM 495
Query: 324 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+G + A+ V ME + + TY+ ++ CK +L A++LL L+ G+
Sbjct: 496 EGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGL 549
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 154/298 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ + A M+ G+ P++VTYNSLI G + N L ++ L D+M+ +G
Sbjct: 279 LIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLG 338
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++ ++N+L++ + EA ++F D+ DL P TFN M++ CK +
Sbjct: 339 LKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGF 398
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P + TYN LI GLC+ +R A+ +L E+ + + +TY ++
Sbjct: 399 ALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGW 458
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + ++L M G + Y T++ + G LK A QM +G + ++
Sbjct: 459 CKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANV 518
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
V+YN LI +CK GKLE A LL+EM ++G ++ T+ ++ + + G I HL
Sbjct: 519 VTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIPDIEGHL 576
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 175/345 (50%), Gaps = 9/345 (2%)
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
S N L+ L + + E V+++MI + P TFNI +NGLCK + A + +
Sbjct: 167 SCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDI 226
Query: 128 QKHGFVPELVTYNILIKGLCK---AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
+ GF P +VTYN LI G CK AG++ A ILKE+ + PN IT+ T++ ++
Sbjct: 227 KAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKD 286
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
M+R+G + Y ++I G+L EA ++MV G++ +IV++
Sbjct: 287 ENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTF 346
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMN 303
N LIN +CK+ ++ A L D++ +Q + T +ID CKAG + +G LH ++
Sbjct: 347 NALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLD 406
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHA---INVFESMEVK-DSFTYSSMVHNLCKAKRLP 359
+ G N+ YNC++ L ++ + A +N E+ E+K D TY+ ++ CK
Sbjct: 407 E-GIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPS 465
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
A KLL L GV+ ++DG G + A K+++++
Sbjct: 466 KAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQME 510
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 167/340 (49%), Gaps = 3/340 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL---LSCSLDLLDEM 57
+ I+ C+ + ++ ++ G SP++VTYN+LI G + + + +L EM
Sbjct: 205 IFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEM 264
Query: 58 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
L I P+ ++N+L+ + A F++M L P T+N ++NGL N
Sbjct: 265 LANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKL 324
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
D A+ ++ + G P +VT+N LI G CK ++ AR + ++ + PNAIT+ T+
Sbjct: 325 DEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTM 384
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + + G + ++M +G + Y +IA + ++ A + +M +
Sbjct: 385 IDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYEL 444
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+ D+V+YN LI +CK+G+ A LL EM G + + T+ L+DG C GN+K A
Sbjct: 445 KADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALK 504
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M K G +N+ YN ++ K GK++ A + M
Sbjct: 505 VRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEM 544
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 101/246 (41%), Gaps = 42/246 (17%)
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
LG NA+ ++ N + E+ ++ G+ +++A VK
Sbjct: 121 LGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNE 180
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
E ++M+ +Q ++ ++N IN CK GKL A ++++++ GF + T+
Sbjct: 181 TGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNT 240
Query: 282 LIDGLCKAG--------------------------------------NIKGARLHLEYMN 303
LIDG CK G N+ A+ E M
Sbjct: 241 LIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQ 300
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLP 359
+ G N+ YN +++ L +GK+D AI +++ M + T++++++ CK K +
Sbjct: 301 RQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIK 360
Query: 360 SASKLL 365
A KL
Sbjct: 361 EARKLF 366
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C+ +L M G+ P+ VTYN+L+ G L +L + +M +
Sbjct: 453 ILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKE 512
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 107
G +V +YN L+ + GK ++ANR+ +M+ L P T++++
Sbjct: 513 GKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 196/401 (48%), Gaps = 5/401 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++IDA C+ + D +L +M G PD VTYN +I G L + + +M
Sbjct: 305 LIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSR 364
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P++ NS + L + G+ EA +F M P ++ +L+G + +
Sbjct: 365 GLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADM 424
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +F ++ +G + +NILI K G + A I E+ G +P+ +TY+T++
Sbjct: 425 IGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISA 484
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV-QL 239
R + +E + M +G + Y ++I F G L +A + + +M+ G+ +
Sbjct: 485 FSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRP 544
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DIV +N++IN CK+G++ A+ + D + G D T T LIDG C G + A L
Sbjct: 545 DIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKIL 604
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ M +G ++++ Y+ ++D K+G+I+ + +F M+ K ++ TY M+ L +A
Sbjct: 605 DAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRA 664
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
R +A K ++SG + S ++ GL + C EA
Sbjct: 665 GRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEA 705
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 175/360 (48%), Gaps = 7/360 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYN 70
+A +L+RM E G P+V +Y+ ++ G NS+ +LDL M + G P+V +YN
Sbjct: 210 EAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYN 269
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+++H F+ G+ +A +F +M + P T+N++++ LCK R D A + R + +
Sbjct: 270 TVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTN 329
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G P+ VTYN +I G GRL+ A + +++ G PN + + + ++ + K
Sbjct: 330 GAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEA 389
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
EI +M KG+ D YCT++ + G + M ++G+ D +N LI+
Sbjct: 390 AEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHA 449
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
Y K G ++ A L+ EM++QG D T++ +I + G + A M G N
Sbjct: 450 YAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPN 509
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK-----DSFTYSSMVHNLCKAKRLPSASKLL 365
Y+ I+ G + A + M K D ++S++++LCK R+ A +
Sbjct: 510 TAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIF 569
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 172/396 (43%), Gaps = 75/396 (18%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ N M+ GI+ D +N LI + ++ ++ + EM + G+ PDV +Y++++
Sbjct: 427 LFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFS 486
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV-PEL 136
++G+ +A F M+ + P TA ++ ++ G C + A + + G P++
Sbjct: 487 RMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDI 546
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
V +N +I LCK GR+ A I + D G P+ IT+T+++
Sbjct: 547 VFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLID----------------- 589
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
GYC V G++ +A ++ M GV+ DIV+Y+TL++ Y K G+
Sbjct: 590 -----------GYCLV-------GKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGR 631
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+ L EM+++G + + T+ I++ GL +AG AR M + G + Y
Sbjct: 632 INDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGI 691
Query: 317 IVDRLGKDGKIDHAINVFESM--------------------------EVKDSF------- 343
I+ L ++ D AI +F+ + E K+ F
Sbjct: 692 ILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASG 751
Query: 344 ------TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
TY M+ NL K + A+ + S KSG+
Sbjct: 752 LLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGI 787
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 160/376 (42%), Gaps = 36/376 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD-------- 52
+LI AY + D I M++ G+SPDVVTY+++I+ +R L+ +++
Sbjct: 445 ILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVAR 504
Query: 53 ---------------------------LLDEMLEMGIP-PDVWSYNSLMHCLFQLGKPDE 84
L+ EM+ GIP PD+ +NS+++ L + G+ +
Sbjct: 505 GIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMD 564
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
A+ +F + P TF +++G C D A ++ ++ G ++VTY+ L+
Sbjct: 565 AHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLD 624
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
G K GR+ + +E+ G PN +TY ++ FR + + M G T
Sbjct: 625 GYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTV 684
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
Y ++ + EA +++ T V+ I NT+IN K + E A L
Sbjct: 685 TVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELF 744
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+ G ++ T+ ++I L K G ++ A M K G N I+ L +
Sbjct: 745 ATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEK 804
Query: 325 GKIDHAINVFESMEVK 340
G+I A N ++ K
Sbjct: 805 GEIAKAGNYLSKVDGK 820
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 155/384 (40%), Gaps = 42/384 (10%)
Query: 62 IPPDVWSYNSLMHCLFQLGKPD------------------------------------EA 85
+P V +Y+ LM C + +PD
Sbjct: 153 VPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAV 212
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV--PELVTYNILI 143
N + M P +++I+L GLC N + AL +F+ + K G P +V YN +I
Sbjct: 213 NVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVI 272
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G K G A + E+ G P+ +TY I+ + R +L M G
Sbjct: 273 HGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQ 332
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y +I + +GRLKEA +M + G+ +IV N+ + CK G+ + A +
Sbjct: 333 PDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEI 392
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
D M +G + D ++ L+ G G M G ++ +N ++ K
Sbjct: 393 FDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAK 452
Query: 324 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
G +D A+ +F M+ + D TYS+++ + RL A + + G++ +
Sbjct: 453 RGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAV 512
Query: 380 QKAVVDGLRHSGCRREAKKIQSKI 403
+++ G G +AK++ S++
Sbjct: 513 YHSIIQGFCMHGGLVKAKELVSEM 536
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 141/318 (44%), Gaps = 20/318 (6%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGK--------PDEA----NRVFQDMICGDLTPC 100
+ DE+ P S N + L + P A NRV ++ + P
Sbjct: 96 MFDELFRQATPVPGRSLNGFLTALARATSSSACITDGPALALALFNRVCREQAGPRVVPL 155
Query: 101 TA-TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWI 158
T T++I+++ C+ R D L +F + + G +T + L+K LC A R A +
Sbjct: 156 TVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVL 215
Query: 159 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY--TFDGFGYCTVIAAF 216
L + + G PN +Y+ I+K N + L++ M ++G + + Y TVI F
Sbjct: 216 LHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGF 275
Query: 217 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
K G +A +M GV+ D+V+YN +I+ CK ++ A L+L +M G + D
Sbjct: 276 FKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDT 335
Query: 277 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
T+ +I G G +K A M G N+ N + L K G+ A +F+S
Sbjct: 336 VTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDS 395
Query: 337 MEVK----DSFTYSSMVH 350
M K D +Y +++H
Sbjct: 396 MTAKGHKPDIVSYCTLLH 413
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 124/255 (48%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC D + IL+ M G+ D+VTY++L+ G +N ++ L L EM G
Sbjct: 587 LIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKG 646
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +Y ++ LF+ G+ A + F +MI T + + I+L GLC+N D A+
Sbjct: 647 VKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAI 706
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ L + N +I + K R A+ + + SG PN TY ++
Sbjct: 707 ILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINL 766
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + + S+M++ G +I ++ G + +A +Y+ ++ + L+
Sbjct: 767 LKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEA 826
Query: 242 VSYNTLINLYCKEGK 256
+ + +++L+ ++GK
Sbjct: 827 STTSLMLSLFSRKGK 841
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 135/289 (46%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I++ C+ + I + + + G PDV+T+ SLI G + + +LD M +G
Sbjct: 552 VINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVG 611
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D+ +Y++L+ F+ G+ ++ +F++M + P T T+ IML GL + T A
Sbjct: 612 VETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAAR 671
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ F + + G + Y I++ GLC+ A + ++LG + T++
Sbjct: 672 KKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAM 731
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ ++ + E+ + + G + Y +I +K G +++A + M G+
Sbjct: 732 YKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGS 791
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
N +I + ++G++ A L +++ + + T ++++ + G
Sbjct: 792 RLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKG 840
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 94/200 (47%), Gaps = 8/200 (4%)
Query: 12 FDAGYTILNR-----MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
F AG T+ R M E+G + V Y ++ G RN+ ++ L ++ M + +
Sbjct: 662 FRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSI 721
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
N++++ ++++ + +EA +F + L P +T+ +M+ L K+ ++A MF
Sbjct: 722 TILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSS 781
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
++K G VP N +I+ L + G + A L ++ A T + ++ R K
Sbjct: 782 MEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGK 841
Query: 187 YKLGLEILSAMKRKGYTFDG 206
Y +++L A K FDG
Sbjct: 842 YHEDMKLLPA---KYNFFDG 858
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 92/237 (38%), Gaps = 38/237 (16%)
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM-EQ 231
TY+ +M CC R R+ LGL + + R G T++ R +EA + + +
Sbjct: 159 TYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHR 218
Query: 232 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
M G ++ SY+ ++ C + A L M K+G C
Sbjct: 219 MSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACS---------------- 262
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSS 347
N+ AYN ++ K+G+ A ++F M + D TY+
Sbjct: 263 -----------------PNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNL 305
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++ LCKA+ + A +L +G + ++ G G +EA K+ K++
Sbjct: 306 IIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMK 362
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 191/401 (47%), Gaps = 38/401 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I++ C+ + + + M E G++P+ VTY LI G R + L + ++M+E G
Sbjct: 371 MINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECG 430
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I V+SYNS+++C + GK A +F++M+ L P AT+ +++G CK+ A
Sbjct: 431 ISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAF 490
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + G P VT+ LI GLC+ ++ A + E+ + PN +TY +++
Sbjct: 491 KLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGH 550
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R E+L M +KG + D + Y +IA GR+ EA +++ + +LD
Sbjct: 551 CREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDE 610
Query: 242 VSYNTLINLYCKEGKLEAA----------------------------------YLLLDEM 267
+ Y L+ +CKEG+++ A + LL EM
Sbjct: 611 LCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREM 670
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
+G + D +TILIDG K+GN+K A M G+ N Y +V+ L K G +
Sbjct: 671 HGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYV 730
Query: 328 DHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKL 364
+ A +F+ M V ++ TY + +L K + +A +L
Sbjct: 731 NEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQL 771
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 180/369 (48%), Gaps = 4/369 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLI Y Q G ++N MR+ G+ P+V T ++L+ R L+L D ++
Sbjct: 160 MLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNA 219
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD + Y ++ CL +L ++A + + T+N+ +NGLCK++ A
Sbjct: 220 GVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEA 279
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + R L + G +LVTY L+ GLC+ ++ E+ + G+ P+ + +++
Sbjct: 280 VEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEG 339
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + E+L+ + + G + F Y ++I + K G+L+EA M G+ +
Sbjct: 340 LIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPN 399
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+Y LI+ + + KL+ A+ ++M + G Y++ +I+ CK G +K A L +
Sbjct: 400 DVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFK 459
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G + Y ++ KDG + A ++ M K ++ T+++++ LC+
Sbjct: 460 EMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQIN 519
Query: 357 RLPSASKLL 365
++ ASKL
Sbjct: 520 KMAEASKLF 528
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 169/339 (49%), Gaps = 6/339 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ F+ G +++ M E G P + LI G + + + +LL+++ ++G
Sbjct: 301 LVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLG 360
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+++ YNS+++ L + GK +EA +F M L P T+ I+++G + D A
Sbjct: 361 VVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAF 420
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F + + G + +YN +I CK G+++ A + KE+ D G P TYT+++
Sbjct: 421 YYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGY 480
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ ++ M KG + + +I +I ++ EA+ ++MV + +
Sbjct: 481 CKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNE 540
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN LI +C+EG A+ LLDEM K+G D YT+ LI GLC G + A+ E+
Sbjct: 541 VTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAK---EF 597
Query: 302 MNKIGFDS---NLEAYNCIVDRLGKDGKIDHAINVFESM 337
+N + + Y ++ K+G+I A+ + M
Sbjct: 598 INDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEM 636
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 186/400 (46%), Gaps = 4/400 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ C+ F+ I+N+ G S +VTYN I G ++ + ++++ + E
Sbjct: 230 VVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEK 289
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ D+ +Y +L+ L ++ + + + +MI P A + ++ GL K + A
Sbjct: 290 GLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGA 349
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K G VP L YN +I LCK G+L A + + + G PN +TYT ++
Sbjct: 350 FELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDG 409
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R K + + M G + + Y ++I K G++K A ++MV G++
Sbjct: 410 FGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPT 469
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +Y +LI+ YCK+G + A+ L EM +G + T T LI GLC+ + A +
Sbjct: 470 VATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFD 529
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M ++ N YN +++ ++G A + + M K D++TY ++ LC
Sbjct: 530 EMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTG 589
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
R+ A + + R+ + A++ G G +EA
Sbjct: 590 RVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEA 629
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 162/395 (41%), Gaps = 39/395 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI CQ + + M E I P+ VTYN LI G R + + +LLDEM++ G
Sbjct: 511 LICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKG 570
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD ++Y L+ L G+ EA D+ + +L G CK AL
Sbjct: 571 LSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEAL 630
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G +LV+Y +LI G R +L+E+ G P+ + YT ++
Sbjct: 631 VARQEMVGRGLQMDLVSYAVLISGALNQND-RILFELLREMHGKGMQPDNVIYTILIDGF 689
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM--------- 232
++ K E M +GY + Y ++ K G + EA ++M
Sbjct: 690 IKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNH 749
Query: 233 VTDGVQLD-------------------------IVSYNTLINLYCKEGKLEAAYLLLDEM 267
+T G LD V+YN LI YC+ GK + A LLD M
Sbjct: 750 ITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVM 809
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
G D T++ I CK GN+ A E M + G + +N ++ +G++
Sbjct: 810 IGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGEL 869
Query: 328 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 358
D A+ + M ++ TY S++ L + RL
Sbjct: 870 DRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARL 904
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 101/244 (41%), Gaps = 34/244 (13%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
+ +L M G+ PD V Y LI G ++ L + + M+ G P+ +Y +L++
Sbjct: 664 FELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNG 723
Query: 76 LFQLGKPDEANRVFQDMICGDLTP------C----------------------------T 101
LF+ G +EA +F+ M+ G+ P C T
Sbjct: 724 LFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANT 783
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
T+NI++ G C+ A ++ + G VP+ +TY+ I CK G + A + +
Sbjct: 784 VTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWEC 843
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ G P+ + + ++ C N + L++ + M +G Y +++ + R
Sbjct: 844 MLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRAR 903
Query: 222 LKEA 225
L +
Sbjct: 904 LTQV 907
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 59/113 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI YCQ F +L+ M G+ PD +TY++ I + + ++D+ + ML+
Sbjct: 788 ILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQR 847
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 113
G+ PD +N L+H G+ D A ++ DM+ L P +T++ ++ L +
Sbjct: 848 GLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQ 900
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 93/209 (44%), Gaps = 5/209 (2%)
Query: 200 KGYTFDGF-GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
K Y F G+ +I +V+ R+ + + M G+ ++ + + L+N + K
Sbjct: 148 KKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFR 207
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
L D + G + D Y +T+++ LC+ + A+ + G ++ YN +
Sbjct: 208 QVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFI 267
Query: 319 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
+ L K ++ A+ V S+ K D TY ++V LC+ + +++ ++ G
Sbjct: 268 NGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYV 327
Query: 375 ILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++A +++GL G A ++ +K+
Sbjct: 328 PSEAAVSGLIEGLIKMGSIEGAFELLNKV 356
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 127/413 (30%), Positives = 192/413 (46%), Gaps = 44/413 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI A Q +L M G PDV T+N +I G + + + + L+D ML G
Sbjct: 259 LIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRG 318
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD------------------------- 96
PD +Y L+H L ++GK +EA ++ + C +
Sbjct: 319 FYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLN 378
Query: 97 -------LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
P T+NI+++GLCK A + + + G P ++TY IL+ GLCKA
Sbjct: 379 ETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKA 438
Query: 150 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 209
G L A +L E+ G N++ Y ++ R K + L +LS M KG D F Y
Sbjct: 439 GLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTY 498
Query: 210 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
++I K+ R+ EA M+ DG + V+YNTLI+ + G + A L+++M
Sbjct: 499 NSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLF 558
Query: 270 QGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
+G DK T+ LI CK GNI KG L+ E M G ++ + N +++ L K GK+D
Sbjct: 559 RGCTLDKITYNGLIKAFCKVGNIEKGLELY-EQMIMDGLGADTISCNIMINGLCKVGKVD 617
Query: 329 HAINVFESME-------VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
+A FE + V D TY+S+++ LCK R+ A L GVR
Sbjct: 618 NA---FEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVR 667
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 177/358 (49%), Gaps = 5/358 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNR-MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
LI+ Y + LN M G PD+ TYN L+ G + LS + DL++EM
Sbjct: 360 LINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRR 419
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V +Y L++ L + G +EA V +M LT + +N ++ LC+ A
Sbjct: 420 GCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVA 479
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + G P+L TYN LI GLCK R+ A + + G N +TY T++
Sbjct: 480 LNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHA 539
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R ++ L +++ M +G T D Y +I AF K+G +++ + EQM+ DG+ D
Sbjct: 540 LLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGAD 599
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+S N +IN CK GK++ A+ L + +GF D T+ +++GLCK G IK A +
Sbjct: 600 TISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFD 659
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCK 354
+ G + YN + K+G ++ A F E+ V + T++ +V+ L K
Sbjct: 660 RLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLK 717
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 196/401 (48%), Gaps = 52/401 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C V+ + Y +L++ G+SP V T+ ++ + + + LL +M +
Sbjct: 192 ILVTGNCPQVATNVFYDMLSK----GVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKH 247
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ Y +L+H L Q + EA ++ ++M P TFN +++GLCK +A
Sbjct: 248 GCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDA 307
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + GF P+ +TY L+ GLC+ G+L AR IL ++ +A
Sbjct: 308 TKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNA------------ 355
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM-EQMVTDGVQL 239
IL+ T+I +V G+LKEA ++ E M+ G Q
Sbjct: 356 ------------ILN---------------TLINGYVMSGQLKEAQSFLNETMINFGFQP 388
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DI +YN L++ CKEG L A L++EM ++G E + T+ IL++GLCKAG ++ A L L
Sbjct: 389 DIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVL 448
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
M+ G N YNC++ L + K+ A+N+ M K D FTY+S+++ LCK
Sbjct: 449 HEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKV 508
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
R+ A +L + L G A + L H+ RR A
Sbjct: 509 DRIDEAFRLFHNMLLDGA----VANNVTYNTLIHALLRRGA 545
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 185/396 (46%), Gaps = 9/396 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ A C F D+ ++L M + G P+ + Y +LI ++ + +S +L LL+EM M
Sbjct: 223 IVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVM 282
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV ++N ++H L ++ K +A ++ M+ P T+ +L+GLC+ + A
Sbjct: 283 GCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEA 342
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE-LGDSGHAPNAITYTTIMK 179
++ + P N LI G +G+L+ A+ L E + + G P+ TY +M
Sbjct: 343 RKILIKIP----CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMH 398
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ ++++ M R+G + Y ++ K G L+EA + +M G+ +
Sbjct: 399 GLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTI 458
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ V YN LI C++ K+ A LL EM +G + D +T+ LI GLCK I A
Sbjct: 459 NSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLF 518
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
M G +N YN ++ L + G A+ + M + D TY+ ++ CK
Sbjct: 519 HNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKV 578
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ +L + G+ + +++GL G
Sbjct: 579 GNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVG 614
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 186/353 (52%), Gaps = 10/353 (2%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK-- 113
++L+ G+PP+ +N LM + + GK A +F +M+ + P TFN +++G+CK
Sbjct: 234 QLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKAS 293
Query: 114 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+ + NALR + K G P++ TY ++GLCKAGR++ A + +E+ + G PN +
Sbjct: 294 DLNSANALRGL--MAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVV 351
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
+TT++ + GLE+ M +G D Y + ++ LK A D +E+M
Sbjct: 352 FTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMR 411
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG-NI 292
+G++ D V+Y TLI+ +CKEG+L+ A + EM +G D+ T+T LI GL K+G ++
Sbjct: 412 NNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSV 471
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSM 348
R+ E M + G + + Y ++D K+ + + + M+ K TY+ +
Sbjct: 472 DSERILCEMM-EAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVV 530
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
++ C ++ +A LL + L GV ++DG G R+A++++S
Sbjct: 531 MNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEELKS 583
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 176/340 (51%), Gaps = 1/340 (0%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + M G+ P VVT+N+L++G + S L+ + L M + G+ PDV++Y + M L
Sbjct: 266 MFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLC 325
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G+ +A +F++M + P T F +++ CK L + R + G +LV
Sbjct: 326 KAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLV 385
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
YN L GLC+ L+ A I++E+ ++G P+ +TYTT++ + + + +E+ M
Sbjct: 386 AYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEM 445
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+G D Y T+I+ K GR ++ + +M+ G++ D +Y +I+ +CK +
Sbjct: 446 SDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDV 505
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ + LL EM+ +G + T+ ++++G C G +K A + L M IG + YN +
Sbjct: 506 KTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNIL 565
Query: 318 VDRLGKDGKIDHAINVFESME-VKDSFTYSSMVHNLCKAK 356
+D K GK+ A + + V D Y+S+++ K K
Sbjct: 566 LDGHCKHGKVRDAEELKSAKGMVSDFGLYTSLINEFVKKK 605
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 172/365 (47%), Gaps = 4/365 (1%)
Query: 4 DAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP 63
D + S Y ++ +AG+ P+ +N L+ R+ L+ + ++ DEML G+P
Sbjct: 217 DLMNRLPSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVP 276
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
P V ++N+LM + + + AN + M + P T+ + GLCK +A+ M
Sbjct: 277 PTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEM 336
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
F +++ G P V + LI CK G + + +E+ G + + Y + R
Sbjct: 337 FEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCR 396
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
R K +I+ M+ G D Y T+I F K G L A + ++M +GV LD V+
Sbjct: 397 VRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVT 456
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
Y TLI+ K G+ + +L EM + G E D T+T++ID CK ++K L+ M
Sbjct: 457 YTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQ 516
Query: 304 KIGFDSNLEAYNCIVDR---LGKDGKIDHAINVFESMEV-KDSFTYSSMVHNLCKAKRLP 359
G + YN +++ LG+ D +N ++ V D TY+ ++ CK ++
Sbjct: 517 NKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVR 576
Query: 360 SASKL 364
A +L
Sbjct: 577 DAEEL 581
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 156/322 (48%), Gaps = 3/322 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ ++ + M +AG++PDV TY + + G + + ++++ +EM E G
Sbjct: 285 LMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERG 344
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ + +L+ + G + ++M + +N + NGLC+ R A
Sbjct: 345 VNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAAN 404
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++ +G P+ VTY LI G CK G L A + +E+ D G A + +TYTT++
Sbjct: 405 DIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGL 464
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + IL M G D Y VI AF K +K +++M G + +
Sbjct: 465 SKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGV 524
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN ++N +C G+++ A +LL+ M G D T+ IL+DG CK G ++ A E
Sbjct: 525 VTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAE---EL 581
Query: 302 MNKIGFDSNLEAYNCIVDRLGK 323
+ G S+ Y +++ K
Sbjct: 582 KSAKGMVSDFGLYTSLINEFVK 603
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 4/174 (2%)
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 277
++ + EA + Q++ GV + +N L+ + GKL +A + DEM ++G
Sbjct: 221 RLPSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVV 280
Query: 278 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
T L+ G+CKA ++ A M K G ++ Y + L K G+I A+ +FE M
Sbjct: 281 TFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEM 340
Query: 338 EVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ ++ +++++ CK + + +L G++ A A+ +GL
Sbjct: 341 RERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGL 394
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M+IDA+C+ G+ +L M+ G P VVTYN ++ G + + LL+ ML +
Sbjct: 494 MVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNI 553
Query: 61 GIPPDVWSYNSLM--HC 75
G+ PD +YN L+ HC
Sbjct: 554 GVCPDDITYNILLDGHC 570
>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
Length = 688
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/358 (32%), Positives = 169/358 (47%), Gaps = 4/358 (1%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
TYN LI G + DL EM GI P V +YN+++H L Q G + A F +M
Sbjct: 277 TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEM 336
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
L P T+N +LNG CK AL +F L++ G P ++TYNI I G C+ G L
Sbjct: 337 RAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDL 396
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
AR + +E+G+ G PN TYT +MK + E M KG D F Y T
Sbjct: 397 EEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTR 456
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I A + +G + A + E ++ +G+ D V+YN LI+ CK G L+ A L +M G
Sbjct: 457 ICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGL 516
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
+ D T+T LI C+ G ++ AR M G + + I+ + G + A
Sbjct: 517 QPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYG 576
Query: 333 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
F M + + TY+ ++H LC+ R AS L+ G+ K ++DG
Sbjct: 577 WFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDG 634
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 173/376 (46%), Gaps = 4/376 (1%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
Y + M GI P VVTYN++I G ++ L+ + EM MG+ PDV +YNSL++
Sbjct: 295 YDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNG 354
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
+ G EA +F D+ L P T+NI ++G C+ + A + + + G +P
Sbjct: 355 YCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPN 414
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
+ TY IL+KG L AR E+ G P+ Y T + LE+
Sbjct: 415 VCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELRE 474
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
+ +G + D Y +I K G LK+A + +MV++G+Q D ++Y LI+ +C+ G
Sbjct: 475 VLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERG 534
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
L A + + M G T T++I C+ GN+ A M + G + N YN
Sbjct: 535 LLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYN 594
Query: 316 CIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++ L + G+ A + F M V + +TY+ ++ CK A + ++
Sbjct: 595 VLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQN 654
Query: 372 GVRILKSAQKAVVDGL 387
G+ KA+V G
Sbjct: 655 GIHPDYLTHKALVKGF 670
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 161/335 (48%), Gaps = 4/335 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ YC+ + + +R AG++P V+TYN I G R L + L +EM E G
Sbjct: 351 LLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQG 410
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +Y LM + A F +M+ L P +N + AL
Sbjct: 411 CLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAL 470
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L G + VTYNILI GLCK G L+ A+ + ++ +G P+ ITYT ++
Sbjct: 471 ELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAH 530
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +I + M G + +I A+ + G L A + +M+ +GV+ +
Sbjct: 531 CERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNE 590
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLE 300
++YN LI+ C+ G+ + A EM ++G +KYT+T+LIDG CK GN + A R + E
Sbjct: 591 ITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFE 650
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
M++ G + + +V G DG + H I +
Sbjct: 651 -MHQNGIHPDYLTHKALVK--GFDGHVHHTIEYLD 682
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 180/405 (44%), Gaps = 52/405 (12%)
Query: 41 ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPC 100
AT ++ + L EM G+ PDV N ++ L + D+ V ++M+ + P
Sbjct: 144 ATLDTCSTLCLSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPS 203
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGF--VPELVTYNILIKGLCKAGRLRTARWI 158
T+N +L+ K D + + ++ G +P VTYN++I GL + G L A +
Sbjct: 204 IVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAEL 263
Query: 159 LKELGDSGHAPNAITYTTIM-----KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
++ + S A ++ TY ++ + C + + Y L LE M+ +G Y +I
Sbjct: 264 VEGMRLSKKA-SSFTYNPLITGLLARGCVK-KVYDLQLE----MENEGIMPTVVTYNAMI 317
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
++ G ++ A +M G+ D+++YN+L+N YCK G L+ A LL ++ + G
Sbjct: 318 HGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLA 377
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG--------------------------- 306
T+ I IDG C+ G+++ AR+ E M + G
Sbjct: 378 PTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREF 437
Query: 307 FDSNLE--------AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
FD L AYN + G I A+ + E + ++ D+ TY+ ++H LCK
Sbjct: 438 FDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCK 497
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L A +L + + +G++ ++ G REA+KI
Sbjct: 498 TGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKI 542
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 61/146 (41%), Gaps = 35/146 (23%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I AYC+ + + Y +M E G+ P+ +TYN LI R + EMLE
Sbjct: 560 VIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLER 619
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + ++Y ++++G CK ++A
Sbjct: 620 GLVANKYTY-----------------------------------TLLIDGNCKVGNWEDA 644
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGL 146
+R + + ++G P+ +T+ L+KG
Sbjct: 645 MRFYFEMHQNGIHPDYLTHKALVKGF 670
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 181/376 (48%), Gaps = 5/376 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C D + +M++ P V TY LI + S +L+L+ EM E G
Sbjct: 294 LIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKG 353
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P++ +Y L+ L K ++A + M+ L P T+N ++NG CK ++AL
Sbjct: 354 IKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAL 413
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++ P TYN LIKG CK + A +L ++ + P+ +TY +++
Sbjct: 414 DVVELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQ 472
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ + +LS M +G D + Y ++I + K R++EA D + + V ++
Sbjct: 473 CRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNV 532
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V Y LI+ YCK GK+ A+L+L++M + + T LI GLC G +K A L E
Sbjct: 533 VMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEK 592
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
M KI + ++ RL KDG DHA F+ M D+ TY++ + C+ R
Sbjct: 593 MVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652
Query: 358 LPSASKLLLSCLKSGV 373
L A ++ ++GV
Sbjct: 653 LQDAEDMVAKMKENGV 668
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 183/367 (49%), Gaps = 5/367 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ YC+ + + ++ + EAG+ PD TY SLI G + L + + EM G
Sbjct: 224 MVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKG 283
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ +Y L+H L + DEA +F M D P T+ +++ LC + AL
Sbjct: 284 CRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEAL 343
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +++ G P + TY +LI LC +L AR +L ++ + G PN ITY ++
Sbjct: 344 NLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGY 403
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + L+++ M+ + + Y +I + K + +A + +M+ V D+
Sbjct: 404 CKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDV 462
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN+LI+ C+ G ++AY LL M +G D +T+T +ID LCK+ ++ A +
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
+ + N+ Y ++D K GK++ A + E M K +S T+++++H LC +
Sbjct: 523 LEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGK 582
Query: 358 LPSASKL 364
L A+ L
Sbjct: 583 LKEATLL 589
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 198/411 (48%), Gaps = 7/411 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+++ +F D + M E + P++ TYN ++ G + + + + ++E G
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAG 248
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD ++Y SL+ Q D A +VF++M + +++GLC R D A+
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAM 308
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ P + TY +LIK LC + R A ++KE+ + G PN TYT ++
Sbjct: 309 DLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSL 368
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K + E+L M KG + Y +I + K G +++A D +E M + ++ +
Sbjct: 369 CSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNT 428
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN LI YCK + A +L++M ++ D T+ LIDG C++GN A L
Sbjct: 429 RTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT----YSSMVHNLCKAKR 357
MN G + Y ++D L K +++ A ++F+S+E KD Y++++ CKA +
Sbjct: 488 MNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGK 547
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+ A +L L A++ GL G +EA ++ K M KI
Sbjct: 548 VNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEK--MVKI 596
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 183/365 (50%), Gaps = 5/365 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI A C ++ M E GI P++ TY LI L + +LL +MLE
Sbjct: 328 VLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEK 387
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V +YN+L++ + G ++A V + M +L P T T+N ++ G CK R A
Sbjct: 388 GLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKA 446
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + + +P++VTYN LI G C++G +A +L + D G P+ TYT+++
Sbjct: 447 MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDS 506
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++++ + ++ ++++K + Y +I + K G++ EA +E+M++ +
Sbjct: 507 LCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPN 566
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++N LI+ C +GKL+ A LL ++M K + T TILI L K G+ A +
Sbjct: 567 SLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQ 626
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M G + Y + ++G++ A ++ M+ D FTYSS++
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLG 686
Query: 357 RLPSA 361
R SA
Sbjct: 687 RTNSA 691
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 181/387 (46%), Gaps = 24/387 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI YC+ + +LN+M E + PDVVTYNSLI G R+ + LL M + G
Sbjct: 434 LIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD W+Y S++ L + + +EA +F + D+ P + +++G CK + A
Sbjct: 493 LVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAH 552
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + +P +T+N LI GLC G+L+ A + +++ P T T ++
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRL 612
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + M G D Y T I + + GRL++A D + +M +GV D+
Sbjct: 613 LKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDL 672
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC--KAGNIKGARLH- 298
+Y++LI Y G+ +A+++L M G E ++T LI L K G +KG
Sbjct: 673 FTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGV 732
Query: 299 ---------------LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF 343
LE M + G N ++Y ++ + + G + A VF+ M+ K+
Sbjct: 733 CVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGI 792
Query: 344 TYSSMVHNL-----CKAKRLPSASKLL 365
+ S +V N CK ++ A+K++
Sbjct: 793 SPSELVFNALLSCCCKLEKHNEAAKVV 819
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 183/374 (48%), Gaps = 5/374 (1%)
Query: 34 YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
YN+L+ R L+ + EMLE + P++++YN +++ ++G +EAN+ ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245
Query: 94 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 153
L P T+ ++ G C+ + D+A ++F+ + G V Y LI GLC R+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305
Query: 154 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
A + ++ D P TYT ++K + + L ++ M+ KG + Y +I
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLI 365
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ +L++A + + QM+ G+ ++++YN LIN YCK G +E A +++ ME +
Sbjct: 366 DSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLR 425
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
+ T+ LI G CK N+ A L M + ++ YN ++D + G D A +
Sbjct: 426 PNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 334 FESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
M V D +TY+SM+ +LCK+KR+ A L S + V A++DG
Sbjct: 485 LSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCK 544
Query: 390 SGCRREAKKIQSKI 403
+G EA + K+
Sbjct: 545 AGKVNEAHLMLEKM 558
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 176/372 (47%), Gaps = 24/372 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ + + +L +M P+ +T+N+LI G + L + L ++M+++
Sbjct: 538 LIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKID 597
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P V + L+H L + G D A R FQ M+ P T+ + C+ +A
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAE 657
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-- 179
M ++++G P+L TY+ LIKG GR +A +LK + D+G P+ T+ +++K
Sbjct: 658 DMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHL 717
Query: 180 ---------------CCFRNR-KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
C N ++ + +E+L M G T + Y ++ +IG L+
Sbjct: 718 LEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLR 777
Query: 224 EAT---DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
A D+M+Q +G+ + +N L++ CK K A ++D+M G +
Sbjct: 778 VAEKVFDHMQQ--KEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCK 835
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
ILI L K G + + + + G+ + A+ I+D +GK G ++ +F ME K
Sbjct: 836 ILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVME-K 894
Query: 341 DSFTYSSMVHNL 352
+ T+SS ++L
Sbjct: 895 NGCTFSSQTYSL 906
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 168/390 (43%), Gaps = 54/390 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ +FD+ Y +L+ M + G+ PD TY S+I ++ + + DL D + +
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKD 527
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V Y +L+ + GK +EA+ + + M+ + P + TFN +++GLC + A
Sbjct: 528 VIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEAT 587
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K P + T ILI L K G A +++ SG P+A TYTT ++
Sbjct: 588 LLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTY 647
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA---------------- 225
R + + ++++ MK G + D F Y ++I + +GR A
Sbjct: 648 CREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQ 707
Query: 226 -------------------------------------TDYMEQMVTDGVQLDIVSYNTLI 248
+ +E+MV GV + SY L+
Sbjct: 708 HTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLM 767
Query: 249 NLYCKEGKLEAAYLLLDEME-KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
C+ G L A + D M+ K+G + L+ CK A ++ M +G
Sbjct: 768 LGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGH 827
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
LE+ ++ RL K G+ + +VF+++
Sbjct: 828 LPQLESCKILICRLYKKGEKERGTSVFQNL 857
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 130/293 (44%), Gaps = 19/293 (6%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
FD Y +M +G PD TY + I R L + D++ +M E G+ PD+++Y+S
Sbjct: 618 FDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSS 677
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT-------------- 117
L+ LG+ + A V + M P TF ++ L + +Y
Sbjct: 678 LIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSN 737
Query: 118 ----DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD-SGHAPNAI 172
D + + + +HG P +Y L+ G+C+ G LR A + + G +P+ +
Sbjct: 738 MMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSEL 797
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
+ ++ CC + K+ +++ M G+ +I K G + T + +
Sbjct: 798 VFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNL 857
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ G D +++ +I+ K+G +EA Y L + MEK G T+++LI+G
Sbjct: 858 LQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 83/172 (48%), Gaps = 1/172 (0%)
Query: 9 FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM-GIPPDVW 67
+ FD +L +M E G++P+ +Y L+ G L + + D M + GI P
Sbjct: 738 MMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSEL 797
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+N+L+ C +L K +EA +V DMIC P + I++ L K + +F+ L
Sbjct: 798 VFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNL 857
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+ G+ + + + I+I G+ K G + + + +G ++ TY+ +++
Sbjct: 858 LQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIE 909
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 201/437 (45%), Gaps = 39/437 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ + D +L M + G+ PDVVTYN++I G + + + +L M++
Sbjct: 275 IIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKD 334
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ +YN L+H G+ E R ++M L P T++++L+ LCKN A
Sbjct: 335 VKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEAR 394
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + + G P + Y IL+ G G + +L + +G +PN + ++
Sbjct: 395 KIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAY 454
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD------ 235
+ + I S M + G + D Y +I A K+GR+ +A QM+ D
Sbjct: 455 AKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNS 514
Query: 236 -----------------------------GVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
GV+ ++V +NT++ C EG++ A L+D
Sbjct: 515 VVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDS 574
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
ME+ G + ++ LI G C AG A L+ M +G +L +Y+ ++ K G+
Sbjct: 575 MERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGR 634
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
ID+A +F M K + TYS+++ L +R A +L L+ +KSG +
Sbjct: 635 IDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNI 694
Query: 383 VVDGLRHSGCRREAKKI 399
+++GL + C EA KI
Sbjct: 695 ILNGLCKTNCVDEAFKI 711
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 177/377 (46%), Gaps = 4/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ I M GI P+V Y L+ G ++ DLLD M+
Sbjct: 379 LLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVAN 438
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+ + +N ++ + DEA +F M L+P T+ I+++ LCK D+A
Sbjct: 439 GISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDA 498
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ F + G P V +N L+ GLC R A + E+ D G PN + + TIM
Sbjct: 499 VLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCN 558
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + ++ +M+R G + Y T+I GR EA ++ MV+ G++ D
Sbjct: 559 LCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPD 618
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++SY+TL+ YCK G+++ AY L EM ++G T++ ++ GL A+
Sbjct: 619 LISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYL 678
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAK 356
M K G ++ YN I++ L K +D A +F+S+ KD T++ M+ L K
Sbjct: 679 NMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGG 738
Query: 357 RLPSASKLLLSCLKSGV 373
R A L S G+
Sbjct: 739 RKKDAMDLFASIPSHGL 755
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 182/379 (48%), Gaps = 8/379 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ + D +L M + G+ DVVTY+++I G + + + +L M++ G
Sbjct: 205 IIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKG 264
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +YN+++ L + D A V Q MI + P T+N +++GLCK + D A
Sbjct: 265 VKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAD 324
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + P++ TYN LI G G + L+E+ G P+ +TY+ ++
Sbjct: 325 GVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYL 384
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N K +I M RKG + Y ++ + G + + TD ++ MV +G+ +
Sbjct: 385 CKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNN 444
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+N ++ Y K+ ++ A + M + G D T+ ILID LCK G + A L
Sbjct: 445 YIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQ 504
Query: 302 MNKIGFDSNLEAYN------CIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA 355
M G N +N C VDR K ++ +++ + +++++ NLC
Sbjct: 505 MINDGVTPNSVVFNSLVYGLCTVDRWEKAEEL--FFEMWDQGVRPNVVFFNTIMCNLCNE 562
Query: 356 KRLPSASKLLLSCLKSGVR 374
++ A +L+ S + GVR
Sbjct: 563 GQVMVAQRLIDSMERVGVR 581
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 196/441 (44%), Gaps = 39/441 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ + D +L M + + PD+ TYN LI G + L+EM G
Sbjct: 310 IIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARG 369
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML------------- 108
+ PDV +Y+ L+ L + GK EA ++F MI + P + I+L
Sbjct: 370 LDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLT 429
Query: 109 --------NGLCKNRYT--------------DNALRMFRGLQKHGFVPELVTYNILIKGL 146
NG+ N Y D A+ +F + +HG P++VTY ILI L
Sbjct: 430 DLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDAL 489
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK GR+ A ++ + G PN++ + +++ +++ E+ M +G +
Sbjct: 490 CKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNV 549
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ T++ G++ A ++ M GV+ +++SYNTLI +C G+ + A LLD
Sbjct: 550 VFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDV 609
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M G + D ++ L+ G CK G I A M + G Y+ I+ L +
Sbjct: 610 MVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRR 669
Query: 327 IDHA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
A +N+ +S + D +TY+ +++ LCK + A K+ S +R
Sbjct: 670 FSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTI 729
Query: 383 VVDGLRHSGCRREAKKIQSKI 403
++D L G +++A + + I
Sbjct: 730 MIDVLFKGGRKKDAMDLFASI 750
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 175/380 (46%), Gaps = 7/380 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG---ISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
L+ C + +L+ M E G +P+VVTYN++I G + + + +L M+
Sbjct: 167 LLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMI 226
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
+ G+ DV +Y++++ L + D A V Q MI + P T+N +++GLCK + D
Sbjct: 227 DKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVD 286
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A + + + G P++VTYN +I GLCKA + A +L+ + D P+ TY ++
Sbjct: 287 RAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLI 346
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
++K + L M +G D Y ++ K G+ EA M+ G++
Sbjct: 347 HGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIK 406
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
++ Y L++ Y G + LLD M G + Y I++ K I A
Sbjct: 407 PNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHI 466
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCK 354
M++ G ++ Y ++D L K G++D A+ F M +S ++S+V+ LC
Sbjct: 467 FSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCT 526
Query: 355 AKRLPSASKLLLSCLKSGVR 374
R A +L GVR
Sbjct: 527 VDRWEKAEELFFEMWDQGVR 546
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 173/368 (47%), Gaps = 8/368 (2%)
Query: 2 LIDAYCQFVSFDAGYTIL-NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L++ C D IL RM E G P+VV+ N+L+ G + +L+LL M E
Sbjct: 131 LLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAED 190
Query: 61 G---IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
G P+V +YN+++ L + D A V Q MI + T++ +++GLCK +
Sbjct: 191 GGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAV 250
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
D A + + + G P++VTYN +I GLCKA + A +L+ + D G P+ +TY TI
Sbjct: 251 DRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTI 310
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + + +L M K D Y +I ++ G KE +E+M G+
Sbjct: 311 IDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGL 370
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
D+V+Y+ L++ CK GK A + M ++G + + + IL+ G G I
Sbjct: 371 DPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTD 430
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 353
L+ M G N +N ++ K ID A+++F M D TY ++ LC
Sbjct: 431 LLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALC 490
Query: 354 KAKRLPSA 361
K R+ A
Sbjct: 491 KLGRVDDA 498
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 166/352 (47%), Gaps = 4/352 (1%)
Query: 5 AYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP 64
AY + D I +RM + G+SPDVVTY LI + + ++ ++M+ G+ P
Sbjct: 453 AYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTP 512
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 124
+ +NSL++ L + + ++A +F +M + P FN ++ LC A R+
Sbjct: 513 NSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLI 572
Query: 125 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
+++ G P +++YN LI G C AGR A +L + G P+ I+Y T+++ +
Sbjct: 573 DSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKT 632
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
+ + M RKG T Y T++ R EA + M+ G Q DI +Y
Sbjct: 633 GRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTY 692
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
N ++N CK ++ A+ + + + + T TI+ID L K G K A +
Sbjct: 693 NIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPS 752
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNL 352
G N+ Y ++ + ++G +D N+F +ME DS ++++ +L
Sbjct: 753 HGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSL 804
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 157/330 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDA C+ D N+M G++P+ V +NSL+ G + +L EM +
Sbjct: 484 ILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQ 543
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V +N++M L G+ A R+ M + P ++N ++ G C TD A
Sbjct: 544 GVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEA 603
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G P+L++Y+ L++G CK GR+ A + +E+ G P A+TY+TI++
Sbjct: 604 AQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQG 663
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F R++ E+ M + G +D + Y ++ K + EA + + + ++ +
Sbjct: 664 LFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPN 723
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I+++ +I++ K G+ + A L + G + T+ I++ + + G +
Sbjct: 724 IITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFL 783
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
M K G + N I+ L G+I A
Sbjct: 784 AMEKSGCTPDSVMLNAIIRSLLGRGEIMRA 813
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 133/266 (50%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+++ M G+ P+V++YN+LI G + LLD M+ +G+ PD+ SY++L+
Sbjct: 571 LIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYC 630
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G+ D A +F++M+ +TP T++ +L GL R A ++ + K G ++
Sbjct: 631 KTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIY 690
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYNI++ GLCK + A I + L PN IT+T ++ F+ + K +++ +++
Sbjct: 691 TYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASI 750
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
G + YC ++ ++ G L E + M G D V N +I G++
Sbjct: 751 PSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEI 810
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILI 283
A L ++++ F + T ++LI
Sbjct: 811 MRAGAYLSKIDEMNFSLEASTTSLLI 836
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 170/364 (46%), Gaps = 14/364 (3%)
Query: 50 SLDLLDEMLEMGIPPDVWSYNSLMHCLFQL---GKPDEANRVFQDMI--CGD-LTPCTAT 103
+L L DE+L P V ++N L++ + + + A +F M C + + P T
Sbjct: 33 ALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDLCT 92
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI-LKEL 162
++I+ C+ ++ F + K G+ V N L+ GLC A R+ A I L+ +
Sbjct: 93 YSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRM 152
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG---YTFDGFGYCTVIAAFVKI 219
+ G PN ++ T++K ++ + LE+L M G T + Y T+I K
Sbjct: 153 PEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKA 212
Query: 220 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
+ A ++ M+ GV+LD+V+Y+T+I+ CK ++ A +L M +G + D T+
Sbjct: 213 QAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTY 272
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-- 337
+IDGLCKA + A L++M G ++ YN I+D L K +D A V + M
Sbjct: 273 NTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMID 332
Query: 338 -EVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
+VK D TY+ ++H + L G+ ++D L +G E
Sbjct: 333 KDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTE 392
Query: 396 AKKI 399
A+KI
Sbjct: 393 ARKI 396
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 177/344 (51%), Gaps = 4/344 (1%)
Query: 25 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 84
ISP+V+T+N +I + L+ ++ + +M PDV++Y +LM L + + DE
Sbjct: 193 VSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDE 252
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
A + +M P TFN+++NGLCK A ++ + G +P VTYN LI
Sbjct: 253 AVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIH 312
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
GLC G+L A +L + S PN +TY TI+ + + G +L+ M+ +GY
Sbjct: 313 GLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCV 372
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ + Y T+I+ K G+ +EA ++M G +L+ + Y+ +I+ C++GK + A +L
Sbjct: 373 NEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVL 432
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
EM +G + YT + L+ G +AGN A + M K F N Y+ ++ L KD
Sbjct: 433 SEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKD 492
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
GK+ A+ V+ M K D YSSM++ L A + A +L
Sbjct: 493 GKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQL 536
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 178/433 (41%), Gaps = 90/433 (20%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+ D ++L+ M+ G P VT+N LI G + LS + L+D M G
Sbjct: 240 LMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKG 299
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL---------- 111
P+ +YN+L+H L GK ++A + M+ P T+ ++NGL
Sbjct: 300 CIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGA 359
Query: 112 -----------CKNRY--------------TDNALRMFRGLQKHGFVPELVTYNILIKGL 146
C N Y + A+ +F+ + G+ + Y+ +I GL
Sbjct: 360 CVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGL 419
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C+ G+ A +L E+ + G PNA T +++MK F +E+ M + +T +
Sbjct: 420 CRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNE 479
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQM------------------------VTDGVQL--- 239
Y +I K G++KEA QM V D +QL
Sbjct: 480 VCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNE 539
Query: 240 ----------DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
D+V+YN L+N CK+ + A LL+ M +G + D T TI +
Sbjct: 540 MLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFL------ 593
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 345
R+ E ++ E + +V RL K ++ A + E M K T+
Sbjct: 594 ------RMLREKLDPP--QDGREFLDELVVRLLKRQRVLGASKIVEVMLQKLLPPKHSTW 645
Query: 346 SSMVHNLCKAKRL 358
+ +V NLCK K++
Sbjct: 646 ARVVENLCKPKKV 658
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 190/381 (49%), Gaps = 7/381 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG---IPPDVWSY 69
DA + RM E G +PDV +YN+LI G +L+LL M G P+V SY
Sbjct: 144 DAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSY 203
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N+++ F+ G+ D+A +F +M+ L P T+N +++GLCK + D A+ + + +
Sbjct: 204 NTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFD 263
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G +P+ TYNI+I+G C G+L A +LK++ SG P+ +TY+ +++ + +
Sbjct: 264 KGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAE 323
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+ +M RKG + Y ++ + G L + D ++ M+ DG+ + ++N LI
Sbjct: 324 ARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILIC 383
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
Y K G ++ A EM + G D +++ +I LCK G ++ A H M G
Sbjct: 384 AYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSP 443
Query: 310 NLEAYNCIVDRL---GKDGKIDH-AINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 365
N+ ++ ++ L G+ K++ A + D+ ++++ NLCK R+ A
Sbjct: 444 NIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFF 503
Query: 366 LSCLKSGVRILKSAQKAVVDG 386
+ GV+ + ++DG
Sbjct: 504 DMVIHIGVKPDVVSYNTLIDG 524
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 191/374 (51%), Gaps = 6/374 (1%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
SP+VV+YN++I G + + + L EM+ G+PPDV +YNSL+ L + D+A
Sbjct: 197 SPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVA 256
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
+ Q M + P T T+NIM+ G C + A+R+ + + G P++VTY++LI+ C
Sbjct: 257 ILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYC 316
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K GR AR + + G PN+ Y ++ ++L M R G F+
Sbjct: 317 KIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHR 376
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
+ +I A+ K G + +A +M +G++ D+VSY+T+I++ CK G++E A ++M
Sbjct: 377 AFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQM 436
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
+G + + T LI GLC G K L E +N+ G + N I+D L K+G+
Sbjct: 437 VSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINR-GIHPDAIFMNTIMDNLCKEGR 495
Query: 327 IDHAINVFE---SMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+ A + F+ + VK D +Y++++ C ++ + K L + G+R +
Sbjct: 496 VVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNS 555
Query: 383 VVDGLRHSGCRREA 396
+++G +G +A
Sbjct: 556 LLNGYFKNGRVEDA 569
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 192/407 (47%), Gaps = 6/407 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID + + D Y + + M G+ PDVVTYNSLI G + + ++ +L M + G
Sbjct: 206 VIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKG 265
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +YN ++ LG+ +EA R+ + M L P T+++++ CK A
Sbjct: 266 VMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEAR 325
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + + G P Y+IL+ G G L R +L + G P I+ C
Sbjct: 326 SVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDG-IPFEHRAFNILICA 384
Query: 182 F-RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ + + M++ G D Y TVI K GR+++A + QMV++G+ +
Sbjct: 385 YAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPN 444
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I+S+ +LI+ C G+ + L EM +G D ++D LCK G + A+ +
Sbjct: 445 IISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFD 504
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
+ IG ++ +YN ++D GK+D +I + M DS+TY+S+++ K
Sbjct: 505 MVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNG 564
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
R+ A L + V+ ++ GL +G A+++ K+
Sbjct: 565 RVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKM 611
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 204/446 (45%), Gaps = 76/446 (17%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ + D IL M + G+ PD TYN +I G L ++ LL +M G
Sbjct: 241 LIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSG 300
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG----------- 110
+ PDV +Y+ L+ ++G+ EA VF M+ P + ++I+L+G
Sbjct: 301 LQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVR 360
Query: 111 ---------------------LC---KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+C K+ D A+ F ++++G P++V+Y+ +I L
Sbjct: 361 DLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHIL 420
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK GR+ A + ++ G +PN I++T+++ ++K E+ M +G D
Sbjct: 421 CKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDA 480
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
T++ K GR+ EA D+ + ++ GV+ D+VSYNTLI+ YC GK++ + LD
Sbjct: 481 IFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDR 540
Query: 267 MEKQGFECDKYTH-----------------------------------TILIDGLCKAGN 291
M G D +T+ I++ GL +AG
Sbjct: 541 MVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGR 600
Query: 292 IKGAR-LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 346
I AR L+++ +++ G +E YN ++ L ++ +D A+ +FE + K D T+S
Sbjct: 601 IVAARELYMKMVDR-GTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFS 659
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSG 372
+++ L K R+ A L + + G
Sbjct: 660 IVINALLKVGRIDEAKSLFSAMVLRG 685
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 168/338 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI AY + + D T MR+ G+ PDVV+Y+++I + + ++ ++M+
Sbjct: 380 ILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSE 439
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P++ S+ SL+H L +G+ + + +MI + P N +++ LCK A
Sbjct: 440 GLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEA 499
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
F + G P++V+YN LI G C G++ + L + G P++ TY +++
Sbjct: 500 QDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNG 559
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+N + + L + M RK F ++ + GR+ A + +MV G QL
Sbjct: 560 YFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLR 619
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I +YNT++ C+ ++ A + +++ + FE D T +I+I+ L K G I A+
Sbjct: 620 IETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFS 679
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
M G ++ Y+ ++ ++G ++ + N+F SME
Sbjct: 680 AMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSME 717
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 154/301 (51%), Gaps = 6/301 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
+ + ++NR GI PD + N+++ + + + D D ++ +G+ PDV SYN+L
Sbjct: 466 ELAFEMINR----GIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTL 521
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ +GK DE+ + M+ L P + T+N +LNG KN ++AL ++R + +
Sbjct: 522 IDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDV 581
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+T NI++ GL +AGR+ AR + ++ D G TY T++ N L
Sbjct: 582 KFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALR 641
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ ++ K + D + VI A +K+GR+ EA MV G D+++Y+ +I +
Sbjct: 642 MFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHI 701
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
+EG LE + L MEK G D + I++ L + G+++ A +L +++ F +LE
Sbjct: 702 EEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNF--SLE 759
Query: 313 A 313
A
Sbjct: 760 A 760
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 163/397 (41%), Gaps = 85/397 (21%)
Query: 50 SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE-------ANRVFQDM---------- 92
+L+L DE+L P V ++NS++ + + A +F M
Sbjct: 33 ALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMMAA 92
Query: 93 ICGDLTPC-------------------------TATFNIMLNGLCKNRYTDNALRM-FRG 126
I G L C T N ++ GLC TD+A+ M FR
Sbjct: 93 IIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRR 152
Query: 127 LQKHGFVPELVTYNILIKGLC--------------------------------------K 148
+ + G+ P++ +YN LIKGLC K
Sbjct: 153 MPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFK 212
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
G + A ++ E+ G P+ +TY +++ + + + IL M KG D
Sbjct: 213 EGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRT 272
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y +I + +G+L+EA +++M G+Q D+V+Y+ LI YCK G+ A + D M
Sbjct: 273 YNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMV 332
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
++G + + + IL+ G G + R L+ M + G A+N ++ K G +D
Sbjct: 333 RKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVD 392
Query: 329 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSA 361
A+ F M D +YS+++H LCK R+ A
Sbjct: 393 KAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDA 429
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 129/258 (50%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G+ PDVV+YN+LI G + S+ LD M+ +G+ PD W+YNSL++ F+ G+ ++A
Sbjct: 510 GVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDA 569
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
++++M D+ C T NIML+GL + A ++ + G + TYN ++ G
Sbjct: 570 LALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGG 629
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LC+ + A + ++L + T++ ++ + + + SAM +G D
Sbjct: 630 LCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPD 689
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y +I + ++ G L+E+ + M +G D N ++ ++G + A L
Sbjct: 690 VITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLT 749
Query: 266 EMEKQGFECDKYTHTILI 283
+++++ F + T +LI
Sbjct: 750 KIDEKNFSLEASTAALLI 767
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 90/188 (47%), Gaps = 6/188 (3%)
Query: 12 FDAGYTILNR-----MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
F AG + R M + G + TYN+++ G NS + +L + +++ DV
Sbjct: 596 FQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDV 655
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
+++ +++ L ++G+ DEA +F M+ P T+++M+ + + + +F
Sbjct: 656 RTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLS 715
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
++K+G + NI+++ L + G +R A L ++ + + A T ++ +K
Sbjct: 716 MEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALLIPIV-SEKK 774
Query: 187 YKLGLEIL 194
Y+ ++ L
Sbjct: 775 YQKEVKFL 782
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 206/477 (43%), Gaps = 75/477 (15%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I Y F+ Y++L R R G P VV+YN +++ R + +L +EM +
Sbjct: 346 MIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDA 405
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
IP ++ +YN ++ L + GK + A V M L P T NIM++ LCK + D+A
Sbjct: 406 IP-NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDAC 464
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT------ 175
+F GL P+ VTY LI+GL + GR+ A + +++ D+ PNA+ YT
Sbjct: 465 SIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNF 524
Query: 176 -----------------------------TIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
T M C F+ + + G + +K G+ D
Sbjct: 525 FKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDA 584
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I VK G EA + M G LD +YNT+I+ +CK GK+ AY LL+E
Sbjct: 585 RSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEE 644
Query: 267 MEKQGFECDKYT-----------------------------------HTILIDGLCKAGN 291
M+ +G E T ++ LIDG K G
Sbjct: 645 MKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGR 704
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSS 347
I A L +E + + G N+ +NC++D L K +I A+ F+SM+ + TYS
Sbjct: 705 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSI 764
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++H LCK ++ A K G + ++ GL +G EA + K +
Sbjct: 765 LIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFK 821
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 202/450 (44%), Gaps = 40/450 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATR----------------- 43
+++D C+ D +I + PD VTY SLI G R
Sbjct: 449 IMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDA 508
Query: 44 ----NSLLSCSL--------------DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
N+++ SL + +EML +G PD+ N+ M C+F+ G+ ++
Sbjct: 509 NQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKG 568
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+FQ++ P ++ I+++GL K + A +F +++ G V + YN +I G
Sbjct: 569 RALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDG 628
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
CK+G++ A +L+E+ GH P +TY +++ + + + K KG +
Sbjct: 629 FCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELN 688
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y ++I F K+GR+ EA ME+++ G+ ++ ++N L++ K ++ A +
Sbjct: 689 VVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQ 748
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M+ + T++ILI GLCK A + + M K GF N+ Y ++ L K G
Sbjct: 749 SMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAG 808
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
I A +FE + V DS Y++++ L A R A +L G I
Sbjct: 809 NIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCV 868
Query: 382 AVVDGLRHSGCRREAKKIQSKIR-MAKISH 410
++D L + C +A + + +R AK H
Sbjct: 869 VLLDSLHKAECIEQAAIVGAVLRETAKAQH 898
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 170/362 (46%), Gaps = 5/362 (1%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
+T + MR+ P Y +LI + + C L L +M E+G +V + +L+
Sbjct: 184 AFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIR 243
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
+ G+ D A + +M L P +N+ ++ K D A + F ++ +G V
Sbjct: 244 VFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVL 303
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
+ VTY +I LCKA RL A + + + + P A Y T++ K++ +L
Sbjct: 304 DDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLL 363
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
+RKG Y +++ + G++ EA E+M D + ++ +YN +I++ CK
Sbjct: 364 ERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKA 422
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
GKLE A ++ D M+ G + T I++D LCKA + A E ++ + Y
Sbjct: 423 GKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTY 482
Query: 315 NCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
+++ LG+ G++D A ++E M ++ ++ Y+S++ N K R K+ L+
Sbjct: 483 CSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLR 542
Query: 371 SG 372
G
Sbjct: 543 LG 544
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 158/368 (42%), Gaps = 24/368 (6%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
YNSL+ R +C +L+EM G P + ++ + K EA Q M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
P + + ++ L +R +D L +F+ +Q+ G+ + + LI+ + GR+
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
A +L E+ + P+ + Y + C + K + + MK G D Y ++
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSM 311
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I K RL EA + E M + +YNT+I Y GK E AY LL+ ++G
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
++ ++ L + G + A E M K NL YN ++D L K GK++ A+
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALV 430
Query: 333 VFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
V ++M+ + T + MV LCKA+RL A ++ +GL
Sbjct: 431 VRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDAC-------------------SIFEGLD 471
Query: 389 HSGCRREA 396
H CR +A
Sbjct: 472 HKTCRPDA 479
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 198/394 (50%), Gaps = 5/394 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ YC+ + + ++++ EAG+ PD TY SLI G + L + + +EM G
Sbjct: 224 MVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG 283
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ +Y L+H L + DEA +F M + P T+ +++ LC + AL
Sbjct: 284 CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEAL 343
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +++ G P + TY +LI LC + AR +L ++ + G PN ITY ++
Sbjct: 344 NLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGY 403
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + ++++ M+ + + + Y +I + K + +A + +M+ V D+
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDV 462
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN+LI+ C+ G ++AY LL M +G D++T+T +ID LCK+ ++ A +
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
+ + G + N+ Y ++D K GK+D A + E M K +S T+++++H LC +
Sbjct: 523 LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGK 582
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
L A+ L +K G++ S ++ L G
Sbjct: 583 LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 180/353 (50%), Gaps = 5/353 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + C ++ M E GI P++ TY LI + +LL +MLE
Sbjct: 328 VLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK 387
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V +YN+L++ + G ++A V + M L+P T T+N ++ G CK+ A
Sbjct: 388 GLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKA 446
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + + +P++VTYN LI G C++G +A +L + D G P+ TYT+++
Sbjct: 447 MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDS 506
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++++ + ++ ++++KG + Y +I + K G++ EA +E+M++ +
Sbjct: 507 LCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 566
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++N LI+ C +GKL+ A LL ++M K G + T TILI L K G+ A +
Sbjct: 567 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 626
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
M G + Y + ++G++ A ++ M D FTYSS++
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 183/374 (48%), Gaps = 5/374 (1%)
Query: 34 YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
YN+L+ R L+ + EMLE + P++++YN +++ +LG +EAN+ ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 94 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 153
L P T+ ++ G C+ + D+A ++F + G V Y LI GLC A R+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 154 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
A + ++ D P TYT ++K + + L ++ M+ G + Y +I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ + ++A + + QM+ G+ ++++YN LIN YCK G +E A +++ ME +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
+ T+ LI G CK+ N+ A L M + ++ YN ++D + G D A +
Sbjct: 426 PNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 334 FESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
M V D +TY+SM+ +LCK+KR+ A L S + GV A++DG
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 390 SGCRREAKKIQSKI 403
+G EA + K+
Sbjct: 545 AGKVDEAHLMLEKM 558
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 179/387 (46%), Gaps = 24/387 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI YC+ + +LN+M E + PDVVTYNSLI G R+ + LL M + G
Sbjct: 434 LIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD W+Y S++ L + + +EA +F + + P + +++G CK D A
Sbjct: 493 LVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAH 552
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + +P +T+N LI GLC G+L+ A + +++ G P T T ++
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRL 612
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + M G D Y T I + + GRL +A D M +M +GV D+
Sbjct: 613 LKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDL 672
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC--KAGNIKGARLHL 299
+Y++LI Y G+ A+ +L M G E ++T LI L K G KG+ L
Sbjct: 673 FTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPEL 732
Query: 300 EYM-NKIGFDS---------------NLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF 343
M N + FD+ N ++Y ++ + + G + A VF+ M+ +
Sbjct: 733 CAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGI 792
Query: 344 TYSSMVHNL-----CKAKRLPSASKLL 365
+ S +V N CK K+ A+K++
Sbjct: 793 SPSELVFNALLSCCCKLKKHNEAAKVV 819
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 170/370 (45%), Gaps = 20/370 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ D + +L +M P+ +T+N+LI G + L + L ++M+++G
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P V + L+H L + G D A FQ M+ P T+ + C+ +A
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-- 179
M ++++G P+L TY+ LIKG G+ A +LK + D+G P+ T+ +++K
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Query: 180 ---------------CCFRNR-KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
C N ++ +E+L M T + Y +I ++G L+
Sbjct: 718 LEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLR 777
Query: 224 EATDYMEQMV-TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
A + M +G+ + +N L++ CK K A ++D+M G + +L
Sbjct: 778 VAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVL 837
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS 342
I GL K G + + + + G+ + A+ I+D +GK G ++ +F ME K+
Sbjct: 838 ICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVME-KNG 896
Query: 343 FTYSSMVHNL 352
+SS ++L
Sbjct: 897 CKFSSQTYSL 906
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 19/293 (6%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
FD Y+ +M +G PD TY + I R L + D++ +M E G+ PD+++Y+S
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSS 677
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT-------------- 117
L+ LG+ + A V + M P TF ++ L + +Y
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSN 737
Query: 118 ----DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG-DSGHAPNAI 172
D + + + +H P +Y LI G+C+ G LR A + + + G +P+ +
Sbjct: 738 MMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSEL 797
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
+ ++ CC + +K+ +++ M G+ +I K G + T + +
Sbjct: 798 VFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNL 857
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ G D +++ +I+ K+G +EA Y L + MEK G + T+++LI+G
Sbjct: 858 LQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 115/275 (41%), Gaps = 39/275 (14%)
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
YN L+ L + G + + + E+ + PN TY ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVN------------------- 226
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
GYC K+G ++EA Y+ ++V G+ D +Y +LI YC+ L+
Sbjct: 227 ---------GYC-------KLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLD 270
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
+A+ + +EM +G ++ +T LI GLC A I A M + Y ++
Sbjct: 271 SAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLI 330
Query: 319 DRLGKDGKIDHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
L + A+N+ + ME +K + TY+ ++ +LC + A +LL L+ G+
Sbjct: 331 KSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLM 390
Query: 375 ILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
A+++G G +A + + K+S
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
Query: 5 AYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE-MGIP 63
A + FD +L +M E ++P+ +Y LI G L + + D M GI
Sbjct: 734 AMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGIS 793
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
P +N+L+ C +L K +EA +V DMIC P + +++ GL K + +
Sbjct: 794 PSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSV 853
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
F+ L + G+ + + + I+I G+ K G + + + +G ++ TY+ +++
Sbjct: 854 FQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 199/403 (49%), Gaps = 5/403 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M+I+ C+ S + + M G+ P+ V Y +LI G + ++ +L M +
Sbjct: 451 MIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKK 510
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV YNS++ L + K +EA +MI L P T+ +++G CK+ A
Sbjct: 511 GVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVA 570
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK-ELGDSGHAPNAITYTTIMK 179
R F+ + G P V LI G CK G A I + LG S H P+ TY+ ++
Sbjct: 571 DRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVH-PDVRTYSALIH 629
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
RN K + +E+LS KG D F Y ++I+ F K G + +A E M G+
Sbjct: 630 GLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISP 689
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+I++YN LIN CK G++E A L D + +G + T+ +IDG CK+GN+ A
Sbjct: 690 NIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLF 749
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF-ESMEVKDSFTYS--SMVHNLCKAK 356
+ M G + Y+ ++D K+G + A+++F ES++ + T S +++ CK+
Sbjct: 750 DEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSG 809
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
++ A++LL + V+ ++D +G +EA++
Sbjct: 810 KVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQF 852
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 203/414 (49%), Gaps = 4/414 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID + + +L M G+ P V Y +LI G R + + +EML
Sbjct: 311 ILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLAR 370
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ ++++YN+L+ + + G ++A+ + +MI + P T T+N M+ G K + T
Sbjct: 371 GVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRV 430
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++K VP T ++I GLC+ G + A + + + G PNA+ YTT++K
Sbjct: 431 KDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKG 490
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ +++ + IL M +KG D Y +VI K +++EA DY+ +M+ G++ +
Sbjct: 491 HVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPN 550
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +Y LI+ YCK G+++ A EM G + T LIDG CK G+ A
Sbjct: 551 VYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFR 610
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF-ESME---VKDSFTYSSMVHNLCKAK 356
M ++ Y+ ++ L ++GK+ A+ + E +E V D FTY+S++ CK
Sbjct: 611 CMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQG 670
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
+ A +L + G+ A+++GL +G A+++ I ++H
Sbjct: 671 GIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAH 724
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 185/395 (46%), Gaps = 4/395 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID Y + FD + + G ++ N L++ + + L + MLE
Sbjct: 171 LLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEA 230
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ DV++Y L++ F+ G E R+ +M +P T+N+++ GLC+ D A
Sbjct: 231 NVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEA 290
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + K G V ++ TY+ILI G K R A+ +L+E+ G P + YT ++
Sbjct: 291 FELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDG 350
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + M +G + F Y ++ K G +++A + +M+ G++ D
Sbjct: 351 FMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPD 410
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+YN +I Y KE LL EM+K YT ++I+GLC+ G+I+ A E
Sbjct: 411 TQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFE 470
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M +G N Y ++ ++G+ A+ + + M+ K D Y+S++ LCK++
Sbjct: 471 IMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSR 530
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
++ A L+ ++ G++ A++ G SG
Sbjct: 531 KMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSG 565
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 176/398 (44%), Gaps = 9/398 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI YC+ M GI+P+ V +LI G + + + + ML
Sbjct: 557 LIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRS 616
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +Y++L+H L + GK A + + + L P T+N +++G CK A
Sbjct: 617 VHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAF 676
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + + G P ++TYN LI GLCKAG + AR + + G A NA+TY TI+
Sbjct: 677 QLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGY 736
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + M KG D F Y +I K G ++A + V G
Sbjct: 737 CKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFA-ST 795
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
S N L++ +CK GK+ A LL++M + + D T+TILID CK G +K A
Sbjct: 796 SSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVD 855
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M K N Y ++ G+ +F+ M K D T+S M+ K
Sbjct: 856 MQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGD 915
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
KL+ LK G + K+ ++D L CR+E
Sbjct: 916 HVKTLKLVDDMLKKGGNVSKNVCHVLIDPL----CRKE 949
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 188/411 (45%), Gaps = 39/411 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+A+ + + G +L M E G SP +VTYN +I G R + + +L M + G
Sbjct: 242 LINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKG 301
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ DV++Y+ L+ + + EA + ++M L P + +++G + + A
Sbjct: 302 LVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAF 361
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + G L TYN L+KG+CK G + A +L E+ G P+ TY +++
Sbjct: 362 RVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGY 421
Query: 182 FRNRKYKLGLEILSAMKRK-----------------------------------GYTFDG 206
+ + ++LS MK+ G +
Sbjct: 422 LKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNA 481
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T+I V+ GR +EA ++ M GVQ D++ YN++I CK K+E A L E
Sbjct: 482 VIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVE 541
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M ++G + + YT+ LI G CK+G ++ A + + M G N ++D K+G
Sbjct: 542 MIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGS 601
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
A ++F M + D TYS+++H L + +L A +LL L+ G+
Sbjct: 602 TTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGL 652
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 187/408 (45%), Gaps = 40/408 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ S +I M + PDV TY++LI G RN L +++LL E LE G
Sbjct: 592 LIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKG 651
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV++YNS++ + G +A ++ + M ++P T+N ++NGLCK + A
Sbjct: 652 LVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERAR 711
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F G+ G VTY +I G CK+G L A + E+ G P++ Y+ ++ C
Sbjct: 712 ELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGC 771
Query: 182 FRNRKYKLGLEILSAMKRKGYT--------FDGF-------------------------- 207
+ + L + +KG+ DGF
Sbjct: 772 RKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHV 831
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y +I K G LKEA + M + + ++Y L++ Y G+ + L DEM
Sbjct: 832 TYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEM 891
Query: 268 EKQGFECDKYTHTILIDGLCKAGN-IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
+ E D T +++ID K G+ +K +L ++ M K G + + + ++D L +
Sbjct: 892 IAKDIEPDGVTWSVMIDAHLKEGDHVKTLKL-VDDMLKKGGNVSKNVCHVLIDPLCRKEH 950
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
+ + V E +E + T S++V KA ++ A+++L S ++
Sbjct: 951 VSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVR 998
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 186/357 (52%), Gaps = 4/357 (1%)
Query: 47 LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 106
+ + + E E+G+ + SYN ++H L QLGK EA+ + M P ++++
Sbjct: 233 IRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSV 292
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+++G C+ L++ LQ+ G P TYN +I LCK GR+ A +L+ + +
Sbjct: 293 IVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQR 352
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ + YTT++ ++ + ++ MKRK D Y ++I + G++ EA
Sbjct: 353 IFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEAR 412
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+M++ G++ D V+Y LI+ YCK G+++ A+ L ++M ++G + T+T L+DGL
Sbjct: 413 KLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGL 472
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDS 342
CK G + A L M++ G N+ YN +++ L K G I+ A+ + E M++ D+
Sbjct: 473 CKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDT 532
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
TY++++ CK + A +LL L G++ +++G SG + +++
Sbjct: 533 ITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERL 589
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 204/443 (46%), Gaps = 39/443 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ CQ +++L +M G PDVV+Y+ ++ G + L L L++E+
Sbjct: 257 IILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRK 316
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ ++YNS++ L + G+ EA +V + M + P + +++G K+
Sbjct: 317 GLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVE 376
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F +++ VP+ VTY +I GLC+AG++ AR + E+ G P+ +TYT ++
Sbjct: 377 YKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDG 436
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + K + + M KG T + Y ++ K G + A + + +M G+Q +
Sbjct: 437 YCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPN 496
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +YN LIN CK G +E A L++EM+ GF D T+T ++D CK G + A L
Sbjct: 497 VCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLR 556
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHA------------------------------ 330
M G + +N +++ G ++
Sbjct: 557 IMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRN 616
Query: 331 -----INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
I +++ M V D+ TY+ ++ CKA+ + A L ++ G + ++
Sbjct: 617 NMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYN 676
Query: 382 AVVDGLRHSGCRREAKKIQSKIR 404
+++ G EA+K+ ++R
Sbjct: 677 SLIKGFYKRKKFEEARKLFEEMR 699
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 153/291 (52%), Gaps = 2/291 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ +++ N+M E G++P+VVTY +L+ G + + + +LL EM E G
Sbjct: 433 LIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKG 492
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V +YN+L++ L ++G ++A ++ ++M P T T+ +++ CK A
Sbjct: 493 LQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAH 552
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-C 180
+ R + G P +VT+N+L+ G C +G L ++K + D G PNA T+ ++MK
Sbjct: 553 ELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQY 612
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C RN + +EI M +G D Y +I K +KEA ++MV G L
Sbjct: 613 CIRN-NMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLT 671
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
SYN+LI + K K E A L +EM GF +K + I +D + GN
Sbjct: 672 AASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGN 722
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 158/332 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I CQ + + M G+ PD VTY +LI G + + + L ++M+E G
Sbjct: 398 MIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKG 457
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V +Y +L+ L + G+ D AN + +M L P T+N ++NGLCK + A+
Sbjct: 458 LTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAV 517
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + GF P+ +TY ++ CK G + A +L+ + D G P +T+ +M
Sbjct: 518 KLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGF 577
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + G ++ M KG + + +++ + ++ + + M GV D
Sbjct: 578 CMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDT 637
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN LI +CK ++ A+ L EM ++GF ++ LI G K + AR E
Sbjct: 638 NTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEE 697
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
M GF + E Y+ VD ++G ++ + +
Sbjct: 698 MRTHGFIAEKEIYDIFVDVNYEEGNWENTLEL 729
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 129/265 (48%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+ D +L+ M E G+ P+V TYN+LI G + + ++ L++EM G
Sbjct: 468 LVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAG 527
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +Y ++M ++G+ +A+ + + M+ L P TFN+++NG C + ++
Sbjct: 528 FFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGE 587
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + + G +P T+N L+K C +R I K + G P+ TY ++K
Sbjct: 588 RLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGH 647
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R K + M KG++ Y ++I F K + +EA E+M T G +
Sbjct: 648 CKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEK 707
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDE 266
Y+ +++ +EG E L DE
Sbjct: 708 EIYDIFVDVNYEEGNWENTLELCDE 732
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 168/344 (48%), Gaps = 7/344 (2%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY--TDNALRMFRG 126
++ L + G EA ++F ++ + + N+ L L N + A R+FR
Sbjct: 184 FDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARL-SNSFDGIRTAFRVFRE 242
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
+ G V+YNI++ LC+ G+++ A +L ++ G+ P+ ++Y+ I+ + +
Sbjct: 243 YSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQ 302
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
L+++ ++RKG + + Y ++I+ K GR+ EA + M + D V Y T
Sbjct: 303 LGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTT 362
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
LI+ + K G + Y L DEM+++ D T+T +I GLC+AG + AR M G
Sbjct: 363 LISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKG 422
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 362
+ Y ++D K G++ A ++ M K + TY+++V LCK + A+
Sbjct: 423 LKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIAN 482
Query: 363 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
+LL + G++ A+++GL G +A K+ ++ +A
Sbjct: 483 ELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLA 526
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ +C + G ++ M + GI P+ T+NSL+ + + ++++ M
Sbjct: 572 VLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQ 631
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G+ PD +YN L+ HC + K EA + ++M+ + A++N ++ G K + +
Sbjct: 632 GVVPDTNTYNILIKGHCKARNMK--EAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFE 689
Query: 119 NALRMFRGLQKHGFVPELVTYNILI 143
A ++F ++ HGF+ E Y+I +
Sbjct: 690 EARKLFEEMRTHGFIAEKEIYDIFV 714
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 198/417 (47%), Gaps = 28/417 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS--LDLLD---- 55
LI AYC+ + Y + +M + G P + YN I N S LDL++
Sbjct: 355 LIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYS 414
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
EML++G+ + + ++ CL GK D+A ++ +M+ P +T++ ++ LC
Sbjct: 415 EMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDAS 474
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
+ A +F ++++G VP + TY ILI CKAG ++ AR E+ G PN +TYT
Sbjct: 475 KVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYT 534
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
++ + ++ + E+ M +G + Y +I K G++++A +M D
Sbjct: 535 ALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGD 594
Query: 236 GVQLD----------------IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
D +++Y L++ CK +++ A+ LLD M G E ++ +
Sbjct: 595 IESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVY 654
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
+IDG CK G ++ A+ M++ G+ NL Y+ +D L KD ++D + V M +
Sbjct: 655 DAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKM-L 713
Query: 340 KDSFT-----YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
++S T Y+ MV LCK + A KL+L + G A++DG SG
Sbjct: 714 ENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSG 770
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 206/461 (44%), Gaps = 61/461 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID++C+ + M G +P+VVTY +LI + + + +L + ML
Sbjct: 500 ILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLE 559
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLT-----------------PCT 101
G P+V +Y +L+ HC + G+ ++A +++ M GD+ P
Sbjct: 560 GCKPNVVTYTALIDGHC--KAGQIEKACQIYARMR-GDIESSDMDKYFKLDHNNCEGPNV 616
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
T+ +++GLCK A + + HG P + Y+ +I G CK G+L+ A+ + +
Sbjct: 617 ITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTK 676
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ + G++PN TY++ + C F++ + L L++LS M T + Y ++ KIG+
Sbjct: 677 MSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGK 736
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
EA M +M G ++V+Y +I+ + K GK+E L +M +G + T+ +
Sbjct: 737 TDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRV 796
Query: 282 LIDGLCKAGNIKGARLHL------------------------EYMNKIGFDSNLEA---- 313
LI+ C G + A L E++ IG L
Sbjct: 797 LINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSIGLLDELSENESV 856
Query: 314 -----YNCIVDRLGKDGKIDHAINVFE------SMEVKDSFTYSSMVHNLCKAKRLPSAS 362
Y ++D K G+++ A+++ E S V + + Y+S++ NL A ++ A
Sbjct: 857 PVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKAL 916
Query: 363 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+L S + V S ++ GL +EA ++ I
Sbjct: 917 ELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQLSDSI 957
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 187/408 (45%), Gaps = 21/408 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ C+ F+ IL+RMR + P+VVTY L++G R L +L M+ G
Sbjct: 285 MVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEG 344
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT---- 117
P+ +NSL+H + A ++F+ MI P +NI + +C N
Sbjct: 345 CYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSD 404
Query: 118 --DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D + + + G V V + + LC AG+ A I+ E+ G P+ TY+
Sbjct: 405 ILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYS 464
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
++ K + + MKR G + Y +I +F K G +++A + ++M+
Sbjct: 465 KVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHK 524
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G ++V+Y LI+ Y K ++ A L + M +G + + T+T LIDG CKAG I+ A
Sbjct: 525 GCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKA 584
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA 355
M S+++ Y K+DH + E + TY ++V LCKA
Sbjct: 585 CQIYARMRGDIESSDMDKY----------FKLDH-----NNCEGPNVITYGALVDGLCKA 629
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
R+ A +LL + L G + AV+DG G ++A+++ +K+
Sbjct: 630 NRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKM 677
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 183/397 (46%), Gaps = 14/397 (3%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
L R+++ G P TYN+LI R L + + EML D ++ + + L +
Sbjct: 199 LGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCK 258
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
GK EA + + D P T +N M++GLC+ + A+ + ++ +P +VT
Sbjct: 259 GGKCREAFDLIDE--AEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVT 316
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
Y IL+ G + G+L + IL + G PN + +++ ++R Y ++ M
Sbjct: 317 YRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMI 376
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYME-------QMVTDGVQLDIVSYNTLINLY 251
+ G G+ + V + ++D ++ +M+ GV L+ V+ +
Sbjct: 377 KCGCQ-PGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCL 435
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
C GK + A+ ++ EM +GF D T++ +I LC A ++ A E M + G ++
Sbjct: 436 CGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSV 495
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLS 367
Y ++D K G I A F+ M K + TY++++H KAK++P A +L
Sbjct: 496 YTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEM 555
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
L G + A++DG +G +A +I +++R
Sbjct: 556 MLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMR 592
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 130/341 (38%), Gaps = 49/341 (14%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK------------------- 144
N ++ C+N + + AL L+ G+ P TYN LI+
Sbjct: 179 LNFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREML 238
Query: 145 ----------------GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
LCK G+ R A ++ E D P+ + Y ++ ++
Sbjct: 239 SYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEAED--FVPDTVFYNRMVSGLCEASLFE 296
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
++IL M+ + Y +++ ++ G+L + M+T+G + +N+LI
Sbjct: 297 EAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLI 356
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK---- 304
+ YCK AY L +M K G + + I I +C + + L+ + K
Sbjct: 357 HAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDI-LDLVEKAYSE 415
Query: 305 ---IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+G N + L GK D A + M V D TYS ++ LC A +
Sbjct: 416 MLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASK 475
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
+ A L ++G+ ++D +G ++A+K
Sbjct: 476 VEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARK 516
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 6/226 (2%)
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
R L E+ D H +++ C RN + + LE L +K GY Y +
Sbjct: 158 RVPLKFLMEIKDDDHELLRRLLNFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNAL 217
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I F++ +L A +M++ +D + + CK GK A+ L+DE E F
Sbjct: 218 IQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEAED--F 275
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
D + ++ GLC+A + A L M N+ Y ++ + G++
Sbjct: 276 VPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKR 335
Query: 333 VFESMEVKDSFT----YSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
+ M + + ++S++H CK++ A KL +K G +
Sbjct: 336 ILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQ 381
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 189/378 (50%), Gaps = 7/378 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A C +L M++ G+ PDVVTY +LI G + + +++LL+EM E G
Sbjct: 100 LMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESG 159
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V Y+ L+H + G+ + +VF++M + P + +++ LC++ A
Sbjct: 160 IEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAA 219
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + + G P +VTYN+LI +CK G +R A + K + + G P+ +TY T++
Sbjct: 220 RVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGL 279
Query: 182 FRNRKYKLGLEILSAMKRKGYT---FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ + +L M +G T D + +VI KIG +++A M +G +
Sbjct: 280 SSVLEMDEAMALLEEMM-QGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCR 338
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
++V++N LI + K++ A L+DEM G + D +T++ILI+G CK ++ A +
Sbjct: 339 CNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESY 398
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---DSFTYSSMVHNLCKA 355
L M G + Y ++ + G + A ++F M+ D+ YS+M+H K+
Sbjct: 399 LSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMIHGAFKS 458
Query: 356 KRLPSASKLLLSCLKSGV 373
A + L + G+
Sbjct: 459 GEKKIAEEFLKDMIDEGL 476
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 187/379 (49%), Gaps = 11/379 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C D +LN M E+GI P+VV Y+ L+ G + + +EM G
Sbjct: 135 LIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRG 194
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV Y +L+ L + GK +A RV M L P T+N+++N +CK AL
Sbjct: 195 IEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREAL 254
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL--GDSGHAPNAITYTTIMK 179
+ + + + G P++VTYN LI GL + A +L+E+ G++ P+ +T+ +++
Sbjct: 255 DLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIH 314
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + L++ + M G + + +I +++ ++K+A + M++M + G+Q
Sbjct: 315 GLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQP 374
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D +Y+ LIN +CK ++E A L EM QG E + + L+ +C G + AR
Sbjct: 375 DSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQAR--- 431
Query: 300 EYMNKIGFDSNLE--AYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLC 353
+ N++ + L+ AY+ ++ K G+ A + M + D+ TYS ++
Sbjct: 432 DLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFA 491
Query: 354 KAKRLPSASKLLLSCLKSG 372
K+ L +A ++L SG
Sbjct: 492 KSGDLAAAERVLKQMTASG 510
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 178/342 (52%), Gaps = 3/342 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID+ C+ +++ M E G+ P+VVTYN LI + + +LDL M E G
Sbjct: 205 LIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKG 264
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD--LTPCTATFNIMLNGLCKNRYTDN 119
+ PDV +YN+L+ L + + DEA + ++M+ G+ + P TFN +++GLCK +
Sbjct: 265 VQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQ 324
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
AL++ + ++G LV +N+LI GL + +++ A ++ E+ SG P++ TY+ ++
Sbjct: 325 ALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILIN 384
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ R+ + LS M+ +G + Y ++ A G + +A D +M + +L
Sbjct: 385 GFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRN-CKL 443
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D +Y+T+I+ K G+ + A L +M +G D T++I I+ K+G++ A L
Sbjct: 444 DAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVL 503
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 341
+ M GF ++ ++ ++ G G + + + M KD
Sbjct: 504 KQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKD 545
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 165/346 (47%), Gaps = 11/346 (3%)
Query: 30 DVVTYNSLIAGATRNSLLSCSLDLLDEM---LEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
D V+YN+++A R L +L LL M + P+ SY +LM L + +A
Sbjct: 55 DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ + M + P T+ ++ GLC D A+ + + + G P +V Y+ L+ G
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK GR + + +E+ G P+ + YT ++ R+ K K ++ M +G +
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I + K G ++EA D + M GVQ D+V+YNTLI +++ A LL+E
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEE 294
Query: 267 MEKQG---FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
M QG D T +I GLCK G ++ A M + G NL A+N ++ L +
Sbjct: 295 M-MQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLR 353
Query: 324 DGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 365
K+ A+ + + M DSFTYS +++ CK +++ A L
Sbjct: 354 VHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYL 399
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 157/354 (44%), Gaps = 43/354 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-- 58
+LI++ C+ S + M E G+ PDVVTYN+LI G + + ++ LL+EM+
Sbjct: 239 VLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQG 298
Query: 59 EMGIPPDVWSYNSLMHCLFQLG-----------------------------------KPD 83
E + PD+ ++NS++H L ++G K
Sbjct: 299 ETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVK 358
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+A + +M L P + T++I++NG CK R + A ++ G PE V Y L+
Sbjct: 359 KAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLL 418
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
K +C G + AR + E+ D +A Y+T++ F++ + K+ E L M +G
Sbjct: 419 KAMCDQGMMGQARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLI 477
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y I F K G L A ++QM G D+ +++LI Y +G E L
Sbjct: 478 PDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILEL 537
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
EM + D + ++ L +I+G +L + GFD+ + + I
Sbjct: 538 TREMTAKDVALDPKIISTIVTSL--GASIEGQKL---LQSLPGFDTEISKGDVI 586
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 144/278 (51%), Gaps = 9/278 (3%)
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDS---GHAPNAITYTTIMKCCFRNRKYKL 189
V + V+YN ++ LC+ G L A ++L+ + PNAI+YTT+M+ +R+
Sbjct: 53 VRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQ 112
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+ +L +M+ G D Y T+I + A + + +M G++ ++V Y+ L++
Sbjct: 113 AVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLH 172
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
YCK G+ E+ + +EM +G E D +T LID LC+ G +K A ++ M + G +
Sbjct: 173 GYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEP 232
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
N+ YN +++ + K+G + A+++ ++M K D TY++++ L + A LL
Sbjct: 233 NVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALL 292
Query: 366 LSCLKSGVRILKSAQ--KAVVDGLRHSGCRREAKKIQS 401
++ R+ +V+ GL G R+A ++++
Sbjct: 293 EEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRA 330
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 206/477 (43%), Gaps = 75/477 (15%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I Y F+ Y++L R R G P VV+YN +++ R + +L +EM +
Sbjct: 346 MIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDA 405
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
IP ++ +YN ++ L + GK + A V M L P T NIM++ LCK + D+A
Sbjct: 406 IP-NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDAC 464
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT------ 175
+F GL P+ VTY LI+GL + GR+ A + +++ D+ PNA+ YT
Sbjct: 465 SIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNF 524
Query: 176 -----------------------------TIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
T M C F+ + + G + +K G+ D
Sbjct: 525 FKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDA 584
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I VK G EA + M G LD +YNT+I+ +CK GK+ AY LL+E
Sbjct: 585 RSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEE 644
Query: 267 MEKQGFECDKYT-----------------------------------HTILIDGLCKAGN 291
M+ +G E T ++ LIDG K G
Sbjct: 645 MKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGR 704
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSS 347
I A L +E + + G N+ +NC++D L K +I A+ F+SM+ + TYS
Sbjct: 705 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSI 764
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++H LCK ++ A K G + ++ GL +G EA + K +
Sbjct: 765 LIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFK 821
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 202/450 (44%), Gaps = 40/450 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATR----------------- 43
+++D C+ D +I + PD VTY SLI G R
Sbjct: 449 IMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDA 508
Query: 44 ----NSLLSCSL--------------DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
N+++ SL + +EML +G PD+ N+ M C+F+ G+ ++
Sbjct: 509 NQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKG 568
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+FQ++ P ++ I+++GL K + A +F +++ G V + YN +I G
Sbjct: 569 RALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDG 628
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
CK+G++ A +L+E+ GH P +TY +++ + + + K KG +
Sbjct: 629 FCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELN 688
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y ++I F K+GR+ EA ME+++ G+ ++ ++N L++ K ++ A +
Sbjct: 689 VVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQ 748
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M+ + T++ILI GLCK A + + M K GF N+ Y ++ L K G
Sbjct: 749 SMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAG 808
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
I A +FE + V DS Y++++ L A R A +L G I
Sbjct: 809 NIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCV 868
Query: 382 AVVDGLRHSGCRREAKKIQSKIR-MAKISH 410
++D L + C +A + + +R AK H
Sbjct: 869 VLLDSLHKAECIEQAAIVGAVLRETAKAQH 898
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 170/362 (46%), Gaps = 5/362 (1%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
+T + MR+ P Y +LI + + C L L +M E+G +V + +L+
Sbjct: 184 AFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIR 243
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
+ G+ D A + +M L P +N+ ++ K D A + F ++ +G V
Sbjct: 244 VFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVL 303
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
+ VTY +I LCKA RL A + + + + P A Y T++ K++ +L
Sbjct: 304 DDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLL 363
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
+RKG Y +++ + G++ EA E+M D + ++ +YN +I++ CK
Sbjct: 364 ERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKA 422
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
GKLE A ++ D M+ G + T I++D LCKA + A E ++ + Y
Sbjct: 423 GKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTY 482
Query: 315 NCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
+++ LG+ G++D A ++E M ++ ++ Y+S++ N K R K+ L+
Sbjct: 483 CSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLR 542
Query: 371 SG 372
G
Sbjct: 543 LG 544
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 158/368 (42%), Gaps = 24/368 (6%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
YNSL+ R +C +L+EM G P + ++ + K EA Q M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
P + + ++ L +R +D L +F+ +Q+ G+ + + LI+ + GR+
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
A +L E+ + P+ + Y + C + K + + MK G D Y ++
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSM 311
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I K RL EA + E M + +YNT+I Y GK E AY LL+ ++G
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
++ ++ L + G + A E M K NL YN ++D L K GK++ A+
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALV 430
Query: 333 VFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
V ++M+ + T + MV LCKA+RL A ++ +GL
Sbjct: 431 VRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDAC-------------------SIFEGLD 471
Query: 389 HSGCRREA 396
H CR +A
Sbjct: 472 HKTCRPDA 479
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 183/393 (46%), Gaps = 5/393 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI-PPDVWSYNSLMHCLFQLG 80
+ AG PD +N + L ++ +L M G PP+ +SYN ++ +++ G
Sbjct: 151 LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAG 210
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
+ +A VF +M + P T+N M++G K + + + HG P +TYN
Sbjct: 211 RGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYN 270
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
+L+ GLC+AGR+ +L E+ P+ TY+ + RN K L + +
Sbjct: 271 VLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKN 330
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G T + ++ K G++ A + ++ +V G+ V YNTLIN YC+ G+LE A
Sbjct: 331 GVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGA 390
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
+ +M+ + + D T+ LI+GLCKA I A+ L M G + +E +N ++D
Sbjct: 391 FSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDA 450
Query: 321 LGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
G+ G+++ V M+ + +Y S+V+ CK ++P A +L V
Sbjct: 451 YGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPN 510
Query: 377 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
A++D G +A + K++ IS
Sbjct: 511 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGIS 543
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 175/354 (49%), Gaps = 4/354 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + M E + P+ +TYN++I G + L L D+M+ G+ P+ +YN L+ L
Sbjct: 218 VFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLC 277
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G+ E + + +M + P T++I+ +GL +N + L +F K+G
Sbjct: 278 RAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDY 337
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T +IL+ GLCK G++ A +L+ L ++G P + Y T++ + + + M
Sbjct: 338 TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM 397
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K + D Y +I K R+ A D + +M +GV + ++NTLI+ Y + G+L
Sbjct: 398 KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 457
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
E +++L EM++ G + + ++ +++ CK G I A L+ M N + YN I
Sbjct: 458 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAI 517
Query: 318 VDRLGKDGKIDHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLS 367
+D + G D A + E M+ + S TY+ ++ LC ++ A +++ S
Sbjct: 518 IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINS 571
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 203/448 (45%), Gaps = 39/448 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID + + +AG+++ ++M G+ P+ +TYN L++G R + + LLDEM
Sbjct: 237 MIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQK 296
Query: 62 IPPDVWSYNSL------------MHCLF-----------------------QLGKPDEAN 86
+ PD ++Y+ L M LF + GK A
Sbjct: 297 MVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAE 356
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
V Q ++ L P +N ++NG C+ + A F ++ P+ +TYN LI GL
Sbjct: 357 EVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 416
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CKA R+ A+ +L E+ D+G P T+ T++ R + + +LS M+ G +
Sbjct: 417 CKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNV 476
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +++ AF K G++ EA ++ M V + YN +I+ Y + G + A++L+++
Sbjct: 477 VSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEK 536
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+ G T+ +LI GLC I A + ++ + +YN ++ G
Sbjct: 537 MKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGN 596
Query: 327 IDHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
ID A+++ + M +K + TY ++ L A RL L +++ V +
Sbjct: 597 IDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNI 656
Query: 383 VVDGLRHSGCRREAKKIQSKIRMAKISH 410
+V+ G +A+ ++ ++ + +H
Sbjct: 657 MVEAYSKYGNEIKAEDLRKEMLQKRNNH 684
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 151/333 (45%), Gaps = 5/333 (1%)
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
P + S N L+ L LG+ + R F + P T +N + A+ M
Sbjct: 123 PSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGM 182
Query: 124 FRGLQKHGFVPE-LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
R + + G P +YN++I G+ +AGR A + E+ + PN ITY T++
Sbjct: 183 LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 242
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ + G + M G + Y +++ + GR+ E + +++M + + D
Sbjct: 243 KGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGF 302
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
+Y+ L + + G +A L + K G YT +IL++GLCK G + A L+ +
Sbjct: 303 TYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL 362
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 358
G YN +++ + G+++ A + F M+ + D TY+++++ LCKA+R+
Sbjct: 363 VNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERI 422
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+A LL+ +GV ++D +G
Sbjct: 423 TNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 455
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 204/421 (48%), Gaps = 19/421 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ + + + M G++PD V+YN+L+ G + +L + EM + G
Sbjct: 266 MVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 325
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV ++ SL+H + + G + A + + M L TF +++G CK + D+AL
Sbjct: 326 IMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDAL 385
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
RG+++ P +V YN LI G C GR+ AR +L E+ G P+ +TY+TI+
Sbjct: 386 LAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAY 445
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N E+ M KG D Y ++I RL +A + M+ G+Q D
Sbjct: 446 CKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDE 505
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR---LH 298
+Y +LI+ +CKEG +E+A L D+M K G D T+++LI+GL K+ A+
Sbjct: 506 FTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFK 565
Query: 299 LEYMNKIGFDSNLEA-YNC-----------IVDRLGKDGKIDHAINVFESMEVK----DS 342
L + + I ++ +A +C ++ G ++ A V++SM + D
Sbjct: 566 LYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDG 625
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 402
YS ++H C+A + A L+ G ++ +++ GL +G EA ++ +
Sbjct: 626 SVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQ 685
Query: 403 I 403
+
Sbjct: 686 L 686
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 195/397 (49%), Gaps = 4/397 (1%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
S + + M G++P+V TYN L+ +L +L +M G P+V +YN
Sbjct: 170 SLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYN 229
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+L+ F+ G+ D A R+ M G L P TFN M+NG+CK ++A ++F + +
Sbjct: 230 TLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVRE 289
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G P+ V+YN L+ G CKAG A + E+ G P+ +T+T+++ + +
Sbjct: 290 GLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERA 349
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+ ++ M+ +G + + +I F K G L +A + M ++ +V YN LIN
Sbjct: 350 VTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALING 409
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
YC G+++ A LL EME +G + D T++ +I CK + A + M + G +
Sbjct: 410 YCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPD 469
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLL 366
Y+ ++ L + ++ A +F++M D FTY+S++ CK + SA L
Sbjct: 470 AITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHD 529
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+K+GV +++GL S EA+++ K+
Sbjct: 530 KMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKL 566
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 187/387 (48%), Gaps = 5/387 (1%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G P V+ YN+++ + SL S D ML G+ P+V++YN L+ L G EA
Sbjct: 151 GYVPSVLAYNAVLLALSDASLTSAR-RFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+ +DM P T+N ++ + D A R+ +++ G P LVT+N ++ G
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
+CKAG++ AR + E+ G AP+ ++Y T++ + L + + M +KG D
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ ++I K G L+ A + QM G+Q++ V++ LI+ +CK+G L+ A L +
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 389
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M++ + + LI+G C G + AR L M G ++ Y+ I+ K+
Sbjct: 390 GMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 449
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
A + + M K D+ TYSS++ LC KRL A L + +K G++ +
Sbjct: 450 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYT 509
Query: 382 AVVDGLRHSGCRREAKKIQSKIRMAKI 408
+++DG G A + K+ A +
Sbjct: 510 SLIDGHCKEGNVESALSLHDKMVKAGV 536
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 148/322 (45%), Gaps = 17/322 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC D +L+ M G+ PDVVTY+++I+ +N + +L +MLE G
Sbjct: 406 LINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 465
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y+SL+ L + +A+ +F++MI L P T+ +++G CK ++AL
Sbjct: 466 VLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESAL 525
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K G +P++VTY++LI GL K+ R A+ +L +L P Y +M CC
Sbjct: 526 SLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCC 585
Query: 182 FRNRKYKLGLEILSAMKRKG----------------YTFDGFGYCTVIAAFVKIGRLKEA 225
R + K L +L KG + DG Y +I + G + +A
Sbjct: 586 -RKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKA 644
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ +QM+ G + S +LI + G + A ++ ++ D LID
Sbjct: 645 LSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDL 704
Query: 286 LCKAGNIKGARLHLEYMNKIGF 307
GN+ L M K G
Sbjct: 705 NLNEGNVDAVLDVLHGMAKDGL 726
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 190/400 (47%), Gaps = 40/400 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I Y FD Y++L R + G P V+ YN ++ R + +L + DEM +
Sbjct: 349 MIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ-D 407
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P++ +YN L+ L + G+ + A +V M L P T NIM++ LCK + D A
Sbjct: 408 AAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEAC 467
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI---- 177
+F GL P+ T+ LI GL + GR+ A + +++ DS PN + YT++
Sbjct: 468 SIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNF 527
Query: 178 -------------------------------MKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
M C F+ + + G + +K +G D
Sbjct: 528 FKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDV 587
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I VK G +E +M G+ LD+++YNT+I+ +CK GK++ AY LL+E
Sbjct: 588 RSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEE 647
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+ +G + T+ ++DGL K + A + E IG D N+ Y+ ++D GK G+
Sbjct: 648 MKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGR 707
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 362
ID A + E + K +S+T++ ++ L KA+ + A
Sbjct: 708 IDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQ 747
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 203/417 (48%), Gaps = 20/417 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ D +I + SPD T+ SLI G R + + L ++ML+
Sbjct: 452 IMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDS 511
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+V Y SL+ F+ G+ ++ ++++++M+ +P N ++ + K +
Sbjct: 512 DQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKG 571
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F ++ G VP++ +Y+ILI GL KAG R + E+ + G + + Y T++
Sbjct: 572 RALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDG 631
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K ++L MK KG Y +V+ KI RL EA E+ + GV L+
Sbjct: 632 FCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLN 691
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V Y++LI+ + K G+++ AYL+L+E+ ++G + YT L+D L KA I A++ +
Sbjct: 692 VVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQ 751
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + N Y+ +++ L K + A ++ M+ + ++ TY++M+ L KA
Sbjct: 752 NMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAG 811
Query: 357 RLPSASKLL-----------LSCLKSGVRILKSAQKA-----VVDGLRHSGCRREAK 397
+ A L +C + + L SA KA V + R GCR +K
Sbjct: 812 NVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSK 868
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 206/415 (49%), Gaps = 18/415 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL--SCSLDL-LDEM 57
+LID C+ +A + + M+EAG+ P+++T N +I + L +CS+ L LD
Sbjct: 417 ILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHK 476
Query: 58 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
+ PD ++ SL+ L + G+ D+A +++ M+ D P + ++ K
Sbjct: 477 V---CSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRK 533
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
++ ++++ + G P+L+ N + + KAG + R + +E+ G P+ +Y+ +
Sbjct: 534 EDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSIL 593
Query: 178 M----KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
+ K F YKL E MK +G D Y TVI F K G++ +A +E+M
Sbjct: 594 IHGLVKAGFSRETYKLFYE----MKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMK 649
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
T G+Q +V+Y ++++ K +L+ AY+L +E + G + + ++ LIDG K G I
Sbjct: 650 TKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRID 709
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
A L LE + + G N +NC++D L K +ID A F++M+ ++ TYS M+
Sbjct: 710 EAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMI 769
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ LC ++ A K G++ ++ GL +G EA+ + + +
Sbjct: 770 NGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFK 824
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 162/357 (45%), Gaps = 42/357 (11%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D T+ ++M+E G +V + +L+ R + +L LLDEM D+ YN
Sbjct: 220 DPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVC 279
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ C ++GK D A + F +M L P T+ ++ LCK R D A+ +F L +
Sbjct: 280 IDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRS 339
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
VP + YN +I G AG+ A +L+ G P+ I Y I+ C R
Sbjct: 340 VPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRK-------- 391
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
G+++EA ++M D ++ +YN LI++ C
Sbjct: 392 ---------------------------GKVEEALRIHDEMRQDAAP-NLTTYNILIDMLC 423
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNL 311
K G+LEAA + D M++ G + T I+ID LCKA + A + L +K+ +
Sbjct: 424 KAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVC-SPDS 482
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKL 364
+ ++D LG+ G++D A +++E M ++ + Y+S++ N K R K+
Sbjct: 483 RTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKI 539
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 123/292 (42%), Gaps = 9/292 (3%)
Query: 120 ALRMFRGLQK---HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
A + FR +++ PE+ YN + + + L IL+E+ +G +
Sbjct: 116 AFQYFRWVERKTQQAHCPEV--YNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVE 173
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ ++ K K ++ M++ + Y T+I A R QM G
Sbjct: 174 LVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIG 233
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
+ ++ + TL+ ++ +EG+++AA LLDEM+ F D + + ID K G + A
Sbjct: 234 YEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAW 293
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNL 352
M G + Y ++ L K ++D A+ +FE +++ S + Y++M+
Sbjct: 294 KFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGY 353
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
A + A LL + G A ++ L G EA +I ++R
Sbjct: 354 GSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMR 405
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 202/409 (49%), Gaps = 6/409 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I++ C G+++L M + G+ P VVT+ LI G + +++L+D + +
Sbjct: 116 VVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKT 175
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G DV +Y L++ L ++GK EA + M + P ++ +++GLCK+ A
Sbjct: 176 GYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEA 235
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + G P LVTY LI+GLC GR + A +L E+ G P+ + ++
Sbjct: 236 LGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDV 295
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K ++ M G D F Y ++I + ++ EAT E MV+ G D
Sbjct: 296 LCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPD 355
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+Y +LI+ +CK + A LLDEM K GF D T T LI G C+ G A+
Sbjct: 356 IVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFL 415
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M+K G NL+ I+D L K + A+++F +ME + YS ++ +C A
Sbjct: 416 NMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAG 475
Query: 357 RLPSASKLLLSCLKS-GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+L +A + L SCL + G++I A +++G G +A+ + S +
Sbjct: 476 KLNTALE-LFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNME 523
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 186/402 (46%), Gaps = 4/402 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ L +M E +P+VV Y++++ G ++ L+S +L L EM
Sbjct: 186 VLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGK 245
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P++ +Y L+ L G+ EA + +M+ + P + NI+++ LCK A
Sbjct: 246 GIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQA 305
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G VP++ TYN LI C ++ A + + + G P+ + YT+++
Sbjct: 306 KSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHG 365
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + +L M + G+T D + T+I F ++GR A + M G +
Sbjct: 366 WCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPN 425
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ + +++ CK L A L MEK + + ++I++DG+C AG + A
Sbjct: 426 LQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFS 485
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ G N+ AY +++ K G +D A ++ +ME + DS TY+ V L +
Sbjct: 486 CLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAER 545
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
+ + K L G + + + +++ L + E ++
Sbjct: 546 EIARSIKYLTMMRDKGFSVDATTTEMIINYLSTNQGDNELRE 587
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 161/355 (45%), Gaps = 5/355 (1%)
Query: 50 SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG-DLTPCTATFNIML 108
+L+ M +M P V + L+ + ++ A + ++M + P T N+++
Sbjct: 59 ALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVI 118
Query: 109 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
N LC + + + K G P +VT+ ILI GLC G + A ++ + +G+
Sbjct: 119 NSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYR 178
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
+ TY ++ + K + L M+ + + + Y TV+ K G + EA
Sbjct: 179 SDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGL 238
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+M G++ ++V+Y LI C G+ + A LLDEM K G D + IL+D LCK
Sbjct: 239 CLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCK 298
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 344
G I A+ + +M +G ++ YN ++DR ++D A VFE M + D
Sbjct: 299 EGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVA 358
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
Y+S++H CK K + A LL +K G ++ G G AK++
Sbjct: 359 YTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKEL 413
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 191/411 (46%), Gaps = 4/411 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ A C+ + D L +M G+ PD TYN+LI G + ++ + EM
Sbjct: 262 VVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS 321
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV + N+LM L + GK EA VF M P ++ IMLNG +
Sbjct: 322 ILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMT 381
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + G P++ T+N+LIK G L A I E+ D G P+ +TY T++
Sbjct: 382 DLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAAL 441
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R K +E + M +G D + Y +I F G L +A + + +++ +G++LDI
Sbjct: 442 CRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDI 501
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V + ++IN CK G++ A + D G D + +L+DG C G ++ A +
Sbjct: 502 VFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDA 561
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G + N+ Y +V+ K G+ID +++F M K + Y+ ++ L +A R
Sbjct: 562 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 621
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
A +SG+ + K V+ GL + C EA + ++R +
Sbjct: 622 TVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNV 672
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 177/392 (45%), Gaps = 7/392 (1%)
Query: 2 LIDAYCQFVSFDAGYTIL-NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L+ +C+ D IL +R E G PDV +YN L+ + DLL M E
Sbjct: 154 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEG 213
Query: 61 GI--PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G PDV +YN+++ F+ G ++A +F++M+ + P T++ +++ LCK R D
Sbjct: 214 GTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMD 273
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A R + G +P+ TYN LI G G+ + A + KE+ P+ + T+M
Sbjct: 274 KAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLM 333
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ K K ++ M KG D F Y ++ + G L + TD + M+ DG+
Sbjct: 334 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIA 393
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
DI ++N LI Y G L+ A ++ +EM G + T+ +I LC+ G + A
Sbjct: 394 PDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
M G + AY+C++ G + A + + D + S+++NLCK
Sbjct: 454 FNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCK 513
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
R+ A + + G+ ++DG
Sbjct: 514 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDG 545
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 165/391 (42%), Gaps = 42/391 (10%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEML---------------------------- 58
+SP TY L+ TR +L ++L
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168
Query: 59 --------EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL--TPCTATFNIML 108
E+G PDV+SYN L+ L GK +A+ + + M G +P +N ++
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228
Query: 109 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
+G K + A +F+ + + G P+LVTY+ ++ LCKA + A L+++ + G
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
P+ TY ++ ++K + + M+R+ D T++ + K G++KEA D
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+ M G D+ SY ++N Y +G L L D M G D YT +LI
Sbjct: 349 FDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYAN 408
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFT 344
G + A + M G ++ Y ++ L + GK+D A+ F M V D +
Sbjct: 409 CGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYA 468
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
Y ++ C L A +L+ + +G+R+
Sbjct: 469 YHCLIQGFCTHGSLLKAKELISEIMNNGMRL 499
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 144/306 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C S +++ + G+ D+V + S+I + + + ++ D + +G
Sbjct: 472 LIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVG 531
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD YN LM +GK ++A RVF M+ + P + ++NG CK D L
Sbjct: 532 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGL 591
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + + G P + YNI+I GL +AGR A+ E+ +SG A N TY+ +++
Sbjct: 592 SLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGL 651
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+NR + + + ++ D T+IA + R++EA D + G+
Sbjct: 652 FKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCA 711
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y+ +I KEG +E A + M+ G E D ++ L K I A +L
Sbjct: 712 VTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSK 771
Query: 302 MNKIGF 307
+++ F
Sbjct: 772 IDERNF 777
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 176/407 (43%), Gaps = 5/407 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI AY D I N MR+ G+ P VVTY ++IA R + +++ ++M++
Sbjct: 401 VLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQ 460
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD ++Y+ L+ G +A + +++ + F ++N LCK +A
Sbjct: 461 GVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDA 520
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F G P+ V YN+L+ G C G++ A + + +G PN + Y T++
Sbjct: 521 QNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNG 580
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + GL + M +KG Y +I + GR A +M G+ ++
Sbjct: 581 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMN 640
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y+ ++ K + A L E+ + D T +I G+ + ++ A+
Sbjct: 641 KCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFA 700
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+++ G Y+ ++ L K+G ++ A ++F SM+ DS + +V L K
Sbjct: 701 SISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKN 760
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG-CRREAKKIQSK 402
+ A L + + +VD G CR + + + +K
Sbjct: 761 EIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFLPAK 807
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 96/244 (39%), Gaps = 34/244 (13%)
Query: 168 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
+P + TY +M CC R + +L L + R G D ++ F + R EA D
Sbjct: 110 SPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALD 169
Query: 228 YMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHTILID 284
+ + G D+ SYN L+ C +GK A LL M + G C D + +ID
Sbjct: 170 ILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVID 229
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT 344
G K G++ A + M + G +L T
Sbjct: 230 GFFKEGDVNKACDLFKEMVQRGIPPDL-------------------------------VT 258
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
YSS+VH LCKA+ + A L + GV ++ G +G +EA ++ ++R
Sbjct: 259 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMR 318
Query: 405 MAKI 408
I
Sbjct: 319 RQSI 322
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 195/395 (49%), Gaps = 5/395 (1%)
Query: 14 AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 73
AGY +L +M E+G P VVTYN+++ + +L+L+D+M GI D +YN L+
Sbjct: 187 AGY-LLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLV 245
Query: 74 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 133
L + + + + + M ++P T+N ++NG K A R+F+ + +
Sbjct: 246 DDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLL 305
Query: 134 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 193
P VTYN LI G C G A IL+ + +G PN ++Y+ ++ R+ K++L I
Sbjct: 306 PNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSI 365
Query: 194 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 253
L M+ G Y +I + G L E+ +++M+ DGV D+V+++ LIN +C+
Sbjct: 366 LERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCR 425
Query: 254 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
GK++ ++ +M K G + +T LI CK G++ A M++IG+D+N
Sbjct: 426 VGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFI 485
Query: 314 YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 369
N +V L KDGK+ A F M V +S T+ +++ + A + +
Sbjct: 486 CNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMI 545
Query: 370 KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
K+G ++ L +G +EAK++ K+
Sbjct: 546 KAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLH 580
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 185/368 (50%), Gaps = 4/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ YC+ + A ++++M GI D TYN L+ +N+ + LL +M +
Sbjct: 209 VLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRM 268
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+ +YNS+++ + GK A R+FQ+M +L P T+N +++G C + + AL
Sbjct: 269 ISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQAL 328
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++ G P V+Y+ L+ GLC+ + ++ IL+ + +G I YT ++
Sbjct: 329 TILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGL 388
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
RN +++L M + G D + +I F ++G++K + + +M G+ +
Sbjct: 389 CRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNS 448
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ Y TLI YCK G + A+ + M + G++ + + +L+ LCK G + A +
Sbjct: 449 IIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHH 508
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
M+KIG N ++CI++ G G A ++F+ M FTY ++ LC+A +
Sbjct: 509 MSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGK 568
Query: 358 LPSASKLL 365
A +LL
Sbjct: 569 FKEAKRLL 576
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 213/437 (48%), Gaps = 42/437 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG---------ATR-------- 43
ML+D C+ GY +L +MR+ ISP+ +TYNS+I G ATR
Sbjct: 243 MLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSML 302
Query: 44 NSLLSC------------------SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
N L +C +L +L+ M G P+ SY++L++ L + K + +
Sbjct: 303 NLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELS 362
Query: 86 NRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
+ + M + G + C A + M++GLC+N + ++++ + K G VP++VT+++LI
Sbjct: 363 KSILERMRMNGMIVGCIA-YTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLIN 421
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
G C+ G+++ + I+ ++ +G APN+I YTT++ + ++ AM R GY
Sbjct: 422 GFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDA 481
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ F ++++ K G++ A + M G + ++++ +IN Y G A+ +
Sbjct: 482 NCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMF 541
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
DEM K G +T+ L+ LC+AG K A+ L+ ++ I + YN I+ K
Sbjct: 542 DEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKS 601
Query: 325 GKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCL-KSGVRILKSA 379
G + A+ +F+ M + DS+TY+ + L + ++ +A + L K V K
Sbjct: 602 GMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVM 661
Query: 380 QKAVVDGLRHSGCRREA 396
VDGL +G + A
Sbjct: 662 YTTFVDGLFRAGQSKAA 678
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 181/350 (51%), Gaps = 6/350 (1%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
+P V ++ LI R ++ +L+ M G P V++ N L+ L + K
Sbjct: 97 NPSV--FDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWL 154
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
F++M+ + P +TFNI++N LC A + + +++ G+VP +VTYN ++ C
Sbjct: 155 FFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYC 214
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K GR + A ++ ++G G +A TY ++ +N + G +L M+++ + +
Sbjct: 215 KKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEI 274
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y ++I FVK G++ AT ++M + + V+YN LI+ +C +G E A +L+ M
Sbjct: 275 TYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMM 334
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
E G + ++ +++ L++GLC+ + ++ LE M G AY ++D L ++G +
Sbjct: 335 EATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLL 394
Query: 328 DHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ ++ + + M V D T+S +++ C+ ++ + +++ K+G+
Sbjct: 395 NESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGL 444
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 157/344 (45%), Gaps = 41/344 (11%)
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
P V ++ L+ + G +A F+ M P T N++L L K R
Sbjct: 98 PSV--FDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLF 155
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
F+ + P++ T+NILI LC G+L+ A ++LK++ +SG+ P+ +TY
Sbjct: 156 FKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYN-------- 207
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
TV+ + K GR K A + ++QM + G++ D +
Sbjct: 208 ---------------------------TVLNWYCKKGRYKAALELIDQMGSKGIEADACT 240
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
YN L++ CK + YLLL +M K+ ++ T+ +I+G K G I A + M+
Sbjct: 241 YNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMS 300
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLP 359
+ N YN ++D DG + A+ + E ME + +YS++++ LC+ +
Sbjct: 301 MLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFE 360
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ +L +G+ + A A++DGL +G E+ K+ K+
Sbjct: 361 LSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKM 404
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 171/398 (42%), Gaps = 41/398 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ + +L++M + G+ PDVVT++ LI G R + +++ +M + G
Sbjct: 384 MIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAG 443
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM----------ICGDLT------------- 98
+ P+ Y +L++ + G EA +V+ M IC L
Sbjct: 444 LAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAE 503
Query: 99 ------------PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
P + TF+ ++NG + A MF + K G P TY L+K L
Sbjct: 504 YFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKAL 563
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C+AG+ + A+ +L +L A + +TY TI+ F++ + + M ++ D
Sbjct: 564 CRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDS 623
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDG-VQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ Y + A ++ G++ A + ++ G V + V Y T ++ + G+ +AA +
Sbjct: 624 YTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCE 683
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+MEK G D ++++G + G + K + + I +L YN ++ K
Sbjct: 684 DMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKK 743
Query: 325 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRL 358
+ N++ M D T S++ CK+ L
Sbjct: 744 KNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAML 781
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/445 (22%), Positives = 201/445 (45%), Gaps = 43/445 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A C+ F +L+++ + D VTYN+++ ++ +L+ ++ L DEM++
Sbjct: 559 LLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRN 618
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD ++Y + L + GK A + +++ G ++P + ++GL + + A
Sbjct: 619 VLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAA 678
Query: 121 LRMFRGLQKHGFV------------------------------------PELVTYNILIK 144
L ++K+G P L TYNIL+
Sbjct: 679 LYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLH 738
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAIT-YTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G K L + + +G P+ +T ++ I+ C ++ +GL++L M G
Sbjct: 739 GYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFC-KSAMLDVGLKLLKKMLLDGVA 797
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D + +I + + + +A D + M + D+ +++++I++ + ++ ++LL
Sbjct: 798 VDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLL 857
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
L EM ++G D+ + L++ +C+ G+I GA + M +G S A + +V L K
Sbjct: 858 LHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAK 917
Query: 324 DGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
GK++ A V + M K T+++++H C+ + L A KL + V++ A
Sbjct: 918 CGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIA 977
Query: 380 QKAVVDGLRHSGCRREAKKIQSKIR 404
++ GL G A K+ +I+
Sbjct: 978 YNVLISGLCADGDVASALKLYKEIK 1002
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 133/308 (43%), Gaps = 39/308 (12%)
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
+ F++++ + +AL FR + GF P + T N+L+ L K ++ KE
Sbjct: 99 SVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKE 158
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ P+ T+ + I G+
Sbjct: 159 MLARRVCPDVSTFNIL-----------------------------------INVLCVEGK 183
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
LK+A +++M G +V+YNT++N YCK+G+ +AA L+D+M +G E D T+ +
Sbjct: 184 LKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNM 243
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME--- 338
L+D LCK L L+ M K N YN I++ K+GKI A +F+ M
Sbjct: 244 LVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLN 303
Query: 339 -VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
+ + TY++++ C A +L +G + + + A+++GL +K
Sbjct: 304 LLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSK 363
Query: 398 KIQSKIRM 405
I ++RM
Sbjct: 364 SILERMRM 371
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 141/318 (44%), Gaps = 11/318 (3%)
Query: 15 GYTILNRMREAG-----------ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP 63
GY+ + +M +AG ISP + TYN L+ G + LS +L + M+ GI
Sbjct: 703 GYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIF 762
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
PD + +SL+ + D ++ + M+ + TFN+++ C+ A +
Sbjct: 763 PDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDL 822
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
+ P++ T++ +I L + ++ + +L E+ + G P+ Y ++ R
Sbjct: 823 VNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCR 882
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
++ M+ G + ++ K G+++EA ++ M+ + I +
Sbjct: 883 MGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIAT 942
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
+ TL++++C+ L A L D M+ + D + +LI GLC G++ A + +
Sbjct: 943 FTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIK 1002
Query: 304 KIGFDSNLEAYNCIVDRL 321
+ G N+ Y ++D +
Sbjct: 1003 QRGLWPNMTTYCILIDAI 1020
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 130/285 (45%), Gaps = 35/285 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ D G +L +M G++ D T+N LI + + DL++ M
Sbjct: 771 LILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFD 830
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+ +++S++ L ++ E++ + +M+ P + ++N +C+ + A
Sbjct: 831 IFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAF 890
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ ++ G V + L++GL K G++ A+ +L + P T+TT+M
Sbjct: 891 KLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMF 950
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
RN + V+ +LK+ D+ + V+LD+
Sbjct: 951 CRNE-----------------------------SLVEALKLKDTMDFCD------VKLDV 975
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
++YN LI+ C +G + +A L E++++G + T+ ILID +
Sbjct: 976 IAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAI 1020
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 111/239 (46%), Gaps = 14/239 (5%)
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
N + +++ R LE M +G+ + ++ VK ++ +
Sbjct: 97 NPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFF 156
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
++M+ V D+ ++N LIN+ C EGKL+ A LL +ME+ G+ T+ +++ CK
Sbjct: 157 KEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKK 216
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 345
G K A ++ M G +++ YN +VD L K+ + + + M + + TY
Sbjct: 217 GRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITY 276
Query: 346 SSMVHNLCKAKRLPSASKL-----LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+S+++ K ++ +A+++ +L+ L + V A++DG H G +A I
Sbjct: 277 NSIINGFVKEGKIGAATRIFQEMSMLNLLPNCV-----TYNALIDGHCHDGNFEQALTI 330
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 117/275 (42%), Gaps = 23/275 (8%)
Query: 152 LRTARWILKELG-DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY-------- 202
L+ W++++ G + H + ++ TT R R Y+ IL + + G
Sbjct: 29 LKFLNWVIQQPGLELRHLTHMLSITT--HILVRARLYENAKSILKHLSQMGVGSKSVFGA 86
Query: 203 TFDGFGYCT--------VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
+ + C +I +++ G + +A + M G + + N L+ KE
Sbjct: 87 LMNTYPLCKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKE 146
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
K+ A +L EM + D T ILI+ LC G +K A L+ M + G+ ++ Y
Sbjct: 147 RKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTY 206
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
N +++ K G+ A+ + + M K D+ TY+ +V +LCK R LL K
Sbjct: 207 NTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRK 266
Query: 371 SGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
+ + ++++G G A +I ++ M
Sbjct: 267 RMISPNEITYNSIINGFVKEGKIGAATRIFQEMSM 301
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 182/346 (52%), Gaps = 4/346 (1%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
+ ISP+V+++N +I + L+ ++++ EM PDV++Y +LM L + + D
Sbjct: 181 KTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRID 240
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
EA + +M P + TFN+++NGLCK ++ + G VP VTYN +I
Sbjct: 241 EAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTII 300
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
GLC G+L A +L + S PN +TY T++ + + G+ +LS+++ +G+
Sbjct: 301 NGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHH 360
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
+ + Y T+I+ K + +EA ++MV G Q +IV Y+ LI+ C+EGKL+ A +
Sbjct: 361 ANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEI 420
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
L EM +G + +T++ LI G K GN + A + M K N Y+ ++ L +
Sbjct: 421 LCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCE 480
Query: 324 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
DGK+ A+ ++ M + D YSSM+H LC A + KL
Sbjct: 481 DGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLF 526
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 173/378 (45%), Gaps = 6/378 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I A C+ D + M PDV TY +L+ G + + ++ LLDEM
Sbjct: 193 LVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIE 252
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P ++N L++ L + G ++ +M P T+N ++NGLC D A
Sbjct: 253 GCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKA 312
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + VP VTY LI GL K GR +L L + GH N Y+T++
Sbjct: 313 VSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISG 372
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+ K + + + M KG + Y +I + G+L EA + + +MV G +
Sbjct: 373 LFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPN 432
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y++LI + K G + A + EM K ++ +++LI GLC+ G ++ A +
Sbjct: 433 AFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWT 492
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF------ESMEVKDSFTYSSMVHNLCK 354
+M G ++ AY+ ++ L G ++ + +F ES D TY+ ++ LCK
Sbjct: 493 HMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCK 552
Query: 355 AKRLPSASKLLLSCLKSG 372
+ A LL S L G
Sbjct: 553 QNSISHAIDLLNSMLDRG 570
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 173/367 (47%), Gaps = 6/367 (1%)
Query: 31 VVTYNSLIAGATRNSLLSCSLDLLDEML--EMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
V ++NS++ + L +L+ + + + I P+V S+N ++ + +LG D A V
Sbjct: 151 VRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEV 210
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
F++M P T+ +++GLCK D A+ + +Q G P VT+N+LI GLCK
Sbjct: 211 FREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCK 270
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
G + ++ + G PN +TY TI+ K + +L M +
Sbjct: 271 KGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVT 330
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y T+I VK GR + + + G + +Y+TLI+ KE K E A L +M
Sbjct: 331 YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMV 390
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
++G + + ++ LIDGLC+ G + A+ L M G N Y+ ++ K G
Sbjct: 391 EKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQ 450
Query: 329 HAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 384
AI V++ M V + YS ++H LC+ +L A + L G+R A +++
Sbjct: 451 KAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMI 510
Query: 385 DGLRHSG 391
GL ++G
Sbjct: 511 HGLCNAG 517
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 165/363 (45%), Gaps = 20/363 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C D ++L+RM + P+ VTY +LI G + + LL + E G
Sbjct: 299 IINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 358
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ ++Y++L+ LF+ K +EA +++ M+ P ++ +++GLC+ D A
Sbjct: 359 HHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAK 418
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P TY+ LIKG K G + A + KE+ + PN I Y+ ++
Sbjct: 419 EILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGL 478
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV--TDGVQL 239
+ K + + + + M +G D Y ++I G ++ +M+ Q
Sbjct: 479 CEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQP 538
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+V+YN L+ CK+ + A LL+ M +G D T I ++ L + N +
Sbjct: 539 DVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLN--PPQDGR 596
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
E++++ +V RL K +I A + E M K ++ T+ ++ LCK
Sbjct: 597 EFLDE------------LVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKP 644
Query: 356 KRL 358
K++
Sbjct: 645 KKV 647
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 186/417 (44%), Gaps = 52/417 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRM---REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
LI+ Y F + + +RM R I + + + + L +++L M+
Sbjct: 86 LIENYANSGDFGTLFQVFDRMKRERRVFIEKNFIL---VFRAYGKAHLPEKAIELFGRMV 142
Query: 59 -EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG--DLTPCTATFNIMLNGLCKNR 115
E V S+NS+++ + Q G A ++ + G +++P +FN+++ +CK
Sbjct: 143 DEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLG 202
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D A+ +FR + P++ TY L+ GLCK R+ A +L E+ G P+++T+
Sbjct: 203 LVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFN 262
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
++ G C K G + T ++ M
Sbjct: 263 VLIN----------------------------GLC-------KKGDMVRVTKLVDNMFLK 287
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG-NIKG 294
G + V+YNT+IN C +GKL+ A LLD M + T+ LI+GL K G ++ G
Sbjct: 288 GCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDG 347
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 350
L L + + G +N AY+ ++ L K+ K + A+ +++ M K + YS+++
Sbjct: 348 VHL-LSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALID 406
Query: 351 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
LC+ +L A ++L + G +++ G +G ++A ++ + MAK
Sbjct: 407 GLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKE--MAK 461
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 209/441 (47%), Gaps = 42/441 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ I+ + E+G DV +YN LI+G ++ + +L +LD MG
Sbjct: 120 LIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLD---RMG 176
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +Y++++ L GK +A +V + P T ++++ CK A+
Sbjct: 177 VSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAM 236
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F ++ G P++VTYN+LIKG CK GRL A LK+L G P+ I++ I++
Sbjct: 237 KLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSL 296
Query: 182 FRNRKYKLGLEILSAMKRK-----------------------------------GYTFDG 206
++ +++L+ M RK G+T +
Sbjct: 297 CSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNS 356
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ +I F + A +Y+E MV+ G DIV+YN L+ CK+GK++ A ++L +
Sbjct: 357 RSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQ 416
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
+ +G ++ +IDGL K G + A LE M G +L +V L ++GK
Sbjct: 417 LSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGK 476
Query: 327 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+ A+ F ++ ++F Y+S++ LCK+++ A L + G + ++
Sbjct: 477 VREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTT 536
Query: 383 VVDGLRHSGCRREAKKIQSKI 403
++ G+ + G +A K+ +++
Sbjct: 537 LIKGITYEGLAEDASKLSNEL 557
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 162/353 (45%), Gaps = 7/353 (1%)
Query: 43 RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 102
RN L L+ M G PDV + +L+ ++G+ A+++ +
Sbjct: 91 RNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVT 150
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
++N++++G CK+ + ALR+ L + G P TY+ ++ LC G+L+ A +L
Sbjct: 151 SYNVLISGYCKSGEIEEALRV---LDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQ 207
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
S P+ +T T ++ + +++ + M+ KG D Y +I F K GRL
Sbjct: 208 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRL 267
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
EA +++++ + G Q D++S+N ++ C G+ A LL M ++G T IL
Sbjct: 268 DEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNIL 327
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 340
I+ LC+ G + A LE M K G N ++N ++ ID AI E M +
Sbjct: 328 INFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGC 387
Query: 341 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
D TY+ ++ LCK ++ A +L G + V+DGL G
Sbjct: 388 YPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVG 440
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 127/272 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M++ + C + +L M G P VVT+N LI + LL +L++L+ M +
Sbjct: 291 MILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKH 350
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ S+N L+ D A + M+ P T+NI+L LCK+ D+A
Sbjct: 351 GHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDA 410
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + L G P L++YN +I GL K G+ A +L+E+ G P+ IT T+++
Sbjct: 411 VVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGG 470
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R K + ++ +KR + F Y ++I K + A D++ MV G +
Sbjct: 471 LSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPT 530
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
+Y TLI EG E A L +E+ +G
Sbjct: 531 EATYTTLIKGITYEGLAEDASKLSNELYSRGL 562
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 142/335 (42%), Gaps = 25/335 (7%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA--------NRVFQDMICGDLTPCTATF 104
L D +++ P WS L +C+F + K + + + F +
Sbjct: 13 LYDGVIDFRKPKGTWSRKHLGNCVFAVSKYENSGLKGNLQHSERFSKGALNGVESSPDRV 72
Query: 105 NIMLN----------GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
N LN L +N + R + G P+++ LI+ CK GR +
Sbjct: 73 NTSLNFEESEIRHLRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKN 132
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
A I+ L +SG + +Y ++ ++ + + E L + R G + + Y V+
Sbjct: 133 ASQIMGILEESGAVIDVTSYNVLISGYCKSGEIE---EALRVLDRMGVSPNAATYDAVLC 189
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
+ G+LK+A + + + D+V+ LI+ CKE + A L +EM +G +
Sbjct: 190 SLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKP 249
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
D T+ +LI G CK G + A L+ + G ++ ++N I+ L G+ A+ +
Sbjct: 250 DVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLL 309
Query: 335 ESMEVKDSF----TYSSMVHNLCKAKRLPSASKLL 365
+M K T++ +++ LC+ L A +L
Sbjct: 310 ATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVL 344
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 57/132 (43%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID + + +L M G+ PD++T S++ G +R + ++ +
Sbjct: 432 VIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFA 491
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+ + YNS++ L + + A DM+ P AT+ ++ G+ ++A
Sbjct: 492 IRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDAS 551
Query: 122 RMFRGLQKHGFV 133
++ L G V
Sbjct: 552 KLSNELYSRGLV 563
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 205/438 (46%), Gaps = 39/438 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ + + +MRE G+SPDVVTYNSLI G + L L +EM ++
Sbjct: 294 VMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDV 353
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN L++C + K A F +M L P T++ +++ CK A
Sbjct: 354 GCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGA 413
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++F +++ G +P TY LI CKAG L A +L ++ +G N +TYT ++
Sbjct: 414 IKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDG 473
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + E+ +M + G + + Y ++ ++K R+++A ++QM ++ D
Sbjct: 474 LCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPD 533
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC---------DKY-------------- 277
++ Y ++I +C + KLE L+L+EM+ +G D Y
Sbjct: 534 LILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQ 593
Query: 278 ------------THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
T+ +LIDGLCKAG ++ A + M +G N+ Y ++D L K+
Sbjct: 594 EMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNN 653
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
I+ A +F+ M+ + D +++++ K L A L+ + +
Sbjct: 654 CIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYT 713
Query: 382 AVVDGLRHSGCRREAKKI 399
++V G G +A+K
Sbjct: 714 SLVSGFSQCGELHQARKF 731
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 182/376 (48%), Gaps = 4/376 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC+F + + M+ G+ P+VVTY++LI + ++ ++ L +M G
Sbjct: 365 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTG 424
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ ++Y SL+ + G EA ++ DM+ + T+ +L+GLCK A
Sbjct: 425 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 484
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + K G P Y L+ G KA R+ A ILK++ + P+ I Y +I+
Sbjct: 485 EVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGH 544
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
RK + IL MK +G + + T+I A+ K G+ +A ++ ++M GV+ I
Sbjct: 545 CSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATI 604
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y LI+ CK G +E A M G + + +T LIDGLCK I+ A+ +
Sbjct: 605 VTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDE 664
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EVKDSF---TYSSMVHNLCKAKR 357
M G ++ A+ ++D K G + A+ + M E+ F Y+S+V +
Sbjct: 665 MQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGE 724
Query: 358 LPSASKLLLSCLKSGV 373
L A K ++ G+
Sbjct: 725 LHQARKFFNEMIEKGI 740
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 183/386 (47%), Gaps = 4/386 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
N M AGI+P V TYN +I + L S L +M EMG+ PDV +YNSL+
Sbjct: 276 FFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYG 335
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
++G +E +F +M P T+N ++N CK A F ++ +G P +V
Sbjct: 336 KVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVV 395
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY+ LI CK G ++ A + ++ +G PN TYT+++ + ++L+ M
Sbjct: 396 TYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDM 455
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ G + Y ++ K GR+ EA + M+ DG+ + Y L++ Y K ++
Sbjct: 456 LQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERM 515
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
E A +L +M + + D + +I G C ++ +L LE M G +N I
Sbjct: 516 EDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTI 575
Query: 318 VDRLGKDGKIDHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+D K GK A+N F+ M+ V+ + TY ++ LCKA + A L G+
Sbjct: 576 IDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGL 635
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKI 399
+ + +++DGL + C AKK+
Sbjct: 636 QPNVAVYTSLIDGLCKNNCIESAKKL 661
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 163/338 (48%), Gaps = 6/338 (1%)
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
P S N L+H L + G + F DMI + P T+N+M++ LCK +N+ R+
Sbjct: 252 PKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRL 311
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
F +++ G P++VTYN LI G K G L + E+ D G P+ ITY ++ C +
Sbjct: 312 FVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCK 371
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
K E S MK G + Y T+I AF K G ++ A M G+ + +
Sbjct: 372 FEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFT 431
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
Y +LI+ CK G L A+ LL++M + G + + T+T L+DGLCKAG + A M
Sbjct: 432 YTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSML 491
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLP 359
K G N + Y +V K +++ A+ + + M D Y S++ C ++L
Sbjct: 492 KDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKL- 550
Query: 360 SASKLLLSCLKS-GVRILKSAQKAVVDGLRHSGCRREA 396
+KL+L +KS G+ ++D +G +A
Sbjct: 551 EETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDA 588
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 167/334 (50%), Gaps = 22/334 (6%)
Query: 53 LLDEMLEMGIP-----PDVWS-----------YNSLMHCLFQLGKPDEANRVFQDMICGD 96
+++ ++MG P +WS ++ L +LG +EAN F M
Sbjct: 190 IMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFR 249
Query: 97 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 156
P + N +L+ L K+ + F + G P + TYN++I LCK G L +R
Sbjct: 250 TLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSR 309
Query: 157 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 216
+ ++ + G +P+ +TY +++ + + + + MK G D Y +I +
Sbjct: 310 RLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCY 369
Query: 217 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
K ++ A +Y +M +G++ ++V+Y+TLI+ +CKEG ++ A L +M + G ++
Sbjct: 370 CKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNE 429
Query: 277 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
+T+T LID CKAGN+ A L M + G N+ Y ++D L K G++ A VF S
Sbjct: 430 FTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRS 489
Query: 337 MEVKDSFT-----YSSMVHNLCKAKRLPSASKLL 365
M +KD + Y+++VH KA+R+ A K+L
Sbjct: 490 M-LKDGISPNQQVYTALVHGYIKAERMEDAMKIL 522
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 130/277 (46%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ Y + + IL +M E I PD++ Y S+I G L + +L+EM G
Sbjct: 505 LVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG 564
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I + +++ F+ GK +A FQ+M + T+ ++++GLCK + A+
Sbjct: 565 ISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAV 624
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F + G P + Y LI GLCK + +A+ + E+ G P+ +T ++
Sbjct: 625 DYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGN 684
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + L ++S M FD Y ++++ F + G L +A + +M+ G+ +
Sbjct: 685 LKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEE 744
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
V L+ Y K G+L+ A L +EME+ G + T
Sbjct: 745 VLCICLLREYYKRGQLDEAIELKNEMERMGLITESAT 781
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 80/201 (39%), Gaps = 35/201 (17%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ + RM G+ P+V Y SLI G +N+ + + L DEM
Sbjct: 609 VLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCR 668
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD+ ++ +L+ + G EA + +R T+ A
Sbjct: 669 GMTPDITAFTALIDGNLKHGNLQEALVLI------------------------SRMTELA 704
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +L Y L+ G + G L AR E+ + G P + +++
Sbjct: 705 IEF-----------DLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLRE 753
Query: 181 CFRNRKYKLGLEILSAMKRKG 201
++ + +E+ + M+R G
Sbjct: 754 YYKRGQLDEAIELKNEMERMG 774
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 173/357 (48%), Gaps = 4/357 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D ++ N + +P + +N ++ ++ L L +M GI P++ + N L
Sbjct: 69 DDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNIL 128
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
++C QLG A VF ++ P T TF ++ GLC AL L GF
Sbjct: 129 INCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGF 188
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
++Y LI GLCK G R A +L+ + PN + Y+TI+ +++ +
Sbjct: 189 QFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFD 248
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ S M KG + + Y +I+ F +G+LK+A D +M+++ ++ D+ ++N L++++C
Sbjct: 249 LYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFC 308
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K GK+ A L+DEM +G + T++ ++D LCK + A L + G N+
Sbjct: 309 KSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMH 368
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
Y ++D L GK++ A N+FE + VK TY M + CK AS LL
Sbjct: 369 TYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALL 425
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 157/322 (48%), Gaps = 6/322 (1%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
D+A +F ++ + TP FN +L L K+++ L + + ++ G P LV NIL
Sbjct: 69 DDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNIL 128
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKG 201
I C+ G + A + ++ G+ PN IT+TT++K C + + ++ L + G
Sbjct: 129 INCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQ-ALNFHDKLVALG 187
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ F+ Y T+I K+G + A D + ++ VQ ++V Y+T+I+ CK+ + A+
Sbjct: 188 FQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAF 247
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
L EM +G + T++ LI G G +K A M ++ +N +VD
Sbjct: 248 DLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVF 307
Query: 322 GKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
K GKI +A+ + + M + + TYSS++ LCK R+ A LL G+R
Sbjct: 308 CKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNM 367
Query: 378 SAQKAVVDGLRHSGCRREAKKI 399
++DGL SG +A+ I
Sbjct: 368 HTYTILIDGLCTSGKLEDARNI 389
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 167/339 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +CQ +++ ++ + G +P+ +T+ +LI G + +L+ D+++ +
Sbjct: 127 ILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVAL 186
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G + SY +L+ L ++G+ A + + + + P ++ +++G+CK+++ ++A
Sbjct: 187 GFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDA 246
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G P +VTY+ LI G G+L+ A + ++ P+ T+ ++
Sbjct: 247 FDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDV 306
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K L+++ M +G + Y +++ A K R+ +A + ++ G++ +
Sbjct: 307 FCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPN 366
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +Y LI+ C GKLE A + +++ +G++ T+ ++ G CK G A L
Sbjct: 367 MHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLS 426
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
M + G + + Y I L K G+ D A + E+
Sbjct: 427 KMEENGCIPDAKTYELIKLSLFKKGENDMAEKLHRECEI 465
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 107/238 (44%), Gaps = 4/238 (1%)
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
N I Y++ N + + + + R+ T + ++ + VK
Sbjct: 51 NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS 110
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
++M G++ ++V+ N LIN +C+ G + A+ + ++ K G+ + T T LI GLC
Sbjct: 111 KKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLK 170
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 345
G I A + + +GF N +Y ++D L K G+ A+++ ++ K + Y
Sbjct: 171 GQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMY 230
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
S+++ +CK K + A L + G+ A++ G G ++A + +K+
Sbjct: 231 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKM 288
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 198/447 (44%), Gaps = 39/447 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D+YC+ D +L+ M+E G P+ VTYN L+ G ++ L + L++EML G
Sbjct: 221 MLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSG 280
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEA--------NRV------------------------- 88
+ ++YN L++ Q G EA NR
Sbjct: 281 LNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVR 340
Query: 89 --FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
F DM+ TP +FN +L G C+ A +F L+ VP ++TYN LI GL
Sbjct: 341 LRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL 400
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C G L A + KE+ D G P+ TYT ++ CF+ + + M KG D
Sbjct: 401 CMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDR 460
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
F Y T I +KI A E+M+ G D+++YN ++ C++G E A LL+
Sbjct: 461 FAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLEN 520
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M G D T+T +I+G K G+++ AR M G ++ Y ++
Sbjct: 521 MVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQM 580
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+D A F M K + TY+++++ LC +R+ A K + G+ K +
Sbjct: 581 LDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTI 640
Query: 383 VVDGLRHSGCRREAKKIQSKIRMAKIS 409
+++ + G EA ++ ++ KI
Sbjct: 641 LINESCNMGYWEEALRLYREMLDRKIQ 667
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 169/338 (50%), Gaps = 5/338 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ YC+ + + + ++ + P V+TYN+LI G L +L L EM + G
Sbjct: 361 LLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQG 420
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+++Y L++ F+LG A F +M+ L P +N + G K T A
Sbjct: 421 LFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAF 480
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + GF P+++TYN+ + LC+ G A +L+ + G P+ +TYT+I+
Sbjct: 481 SMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGF 540
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N + E+ + M KG Y +I A L A Y +M+ V ++
Sbjct: 541 VKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANV 600
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLE 300
++YN +IN C +++ AY DEME++G +K+++TILI+ C G + A RL+ E
Sbjct: 601 ITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYRE 660
Query: 301 YMN-KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
++ KI DS ++ + L +D ++ HA+ ES+
Sbjct: 661 MLDRKIQPDS--FTHSVFLKNLHRDYQV-HAVQCVESL 695
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 169/355 (47%), Gaps = 4/355 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C++V + M ++ +PD+V++NSL+ G R +S + L DE+
Sbjct: 326 LMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRD 385
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P V +YN+L+H L G D A R+ ++M L P T+ I++NG K Y A
Sbjct: 386 LVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMAR 445
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F + G P+ YN I G K A + +E+ +G P+ ITY +
Sbjct: 446 GFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHAL 505
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ ++L M G D Y ++I FVK G L++A + +M++ GV +
Sbjct: 506 CQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSV 565
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y LI+ + + L+ A++ +M ++ + T+ +I+GLC + A + +
Sbjct: 566 VTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDE 625
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
M + G N +Y +++ G + A+ ++ M + DSFT+S + NL
Sbjct: 626 MEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNL 680
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 172/382 (45%), Gaps = 39/382 (10%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M + GI P VVTYN+++ + + +L+LL EM E G P+ +YN L++ L + G+
Sbjct: 206 MEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGE 265
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
++A + ++M+ L T+N ++NG C+ A + + P L TYN
Sbjct: 266 LEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNT 325
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
L+ GLCK ++ R ++ S P+ +++ +++
Sbjct: 326 LMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLL----------------------- 362
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+GYC + G + EA +++ + +++YNTLI+ C G L+AA
Sbjct: 363 -----YGYC-------RTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAAL 410
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
L EM QG D +T+TIL++G K G + AR M G + AYN +
Sbjct: 411 RLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGE 470
Query: 322 GKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
K A ++ E M D TY+ VH LC+ A LL + + G+
Sbjct: 471 MKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDH 530
Query: 378 SAQKAVVDGLRHSGCRREAKKI 399
++++G +G R+A+++
Sbjct: 531 VTYTSIINGFVKNGHLRKAREV 552
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 124/248 (50%), Gaps = 4/248 (1%)
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F + ++G +P++ N +++ L L A+ + + G P +TY T++
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + LE+LS M+ +G + Y ++ K G L++A +E+M+ G+ +
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+YN LIN +C++G A+ L++EM + T+ L+ GLCK + G RL
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFS 344
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAK 356
M K F ++ ++N ++ + G I A +F+ ++ +D TY++++H LC
Sbjct: 345 DMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWG 404
Query: 357 RLPSASKL 364
L +A +L
Sbjct: 405 YLDAALRL 412
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 90/184 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ + A CQ +F+ +L M G+ PD VTY S+I G +N L + ++ +EML
Sbjct: 500 VFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSK 559
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P V +Y L+H D A F M+ + T+N ++NGLC R D A
Sbjct: 560 GVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEA 619
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ F +++ G +P +Y ILI C G A + +E+ D P++ T++ +K
Sbjct: 620 YKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKN 679
Query: 181 CFRN 184
R+
Sbjct: 680 LHRD 683
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 185/365 (50%), Gaps = 6/365 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANR 87
P+ VTYN++IAG + +LD++ EM E G I P+ ++Y +++ ++G+ DEA +
Sbjct: 183 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 242
Query: 88 VFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
VF +M+ G++ P +N ++ G C D AL + + G + TYN+L+ L
Sbjct: 243 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 302
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
GR A +++E+G G A + TY ++ + K LEI M R+G
Sbjct: 303 FMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 362
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y ++I A K G+++E ++ V G++ D+V YN LIN + G ++ A+ ++ E
Sbjct: 363 VTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 422
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
MEK+ D T+ L+ GLC G + AR ++ M K G +L YN ++ G
Sbjct: 423 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGD 482
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+ A+ + M K TY++++ LCK + A ++ +++G+ S +
Sbjct: 483 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 542
Query: 383 VVDGL 387
+++GL
Sbjct: 543 LIEGL 547
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 155/321 (48%), Gaps = 1/321 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+I +C+ D + + M G + P+ V YN+LI G L +L D M+E
Sbjct: 227 VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVER 286
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ V +YN L+H LF G+ EA + ++M L T+NI++NG CK A
Sbjct: 287 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKA 346
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F + + G +VTY LI L K G+++ + E G P+ + Y ++
Sbjct: 347 LEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 406
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ EI+ M++K D Y T++ +GR+ EA +++M G+Q D
Sbjct: 407 HSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPD 466
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YNTLI+ Y +G ++ A + +EM +GF T+ LI GLCK G A ++
Sbjct: 467 LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK 526
Query: 301 YMNKIGFDSNLEAYNCIVDRL 321
M + G + Y +++ L
Sbjct: 527 EMVENGITPDDSTYISLIEGL 547
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 174/359 (48%), Gaps = 8/359 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMRE-AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+I +C A I+ MRE GI+P+ TY ++I+G + + ++ + DEML
Sbjct: 191 VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTK 250
Query: 61 G-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G + P+ YN+L+ GK D A M+ + AT+N++++ L +
Sbjct: 251 GEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE 310
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + + G ++ TYNILI G CK G ++ A I + + G +TYT+++
Sbjct: 311 AYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIY 370
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + + ++ R+G D Y +I + G + A + M +M +
Sbjct: 371 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 430
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLH 298
D V+YNTL+ C G+++ A L+DEM K+G + D T+ LI G G++K A R+
Sbjct: 431 DDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIR 490
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 353
E MNK GF+ L YN ++ L K+G+ D A N+ + M D TY S++ L
Sbjct: 491 NEMMNK-GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 548
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 178/397 (44%), Gaps = 49/397 (12%)
Query: 48 SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 107
+ SL L M + +P S + L+ L A +F DM L CT TFNIM
Sbjct: 105 ATSLRLYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIM 160
Query: 108 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 167
L LC AL + R + + P VTYN +I G C GR++ A I++E+ + G
Sbjct: 161 LRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGG 216
Query: 168 -APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT-FDGFGYCTVIAAFVKIGRLKEA 225
APN TY T++ + + +++ M KG + Y +I + G+L A
Sbjct: 217 IAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTA 276
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
Y ++MV GV + + +YN L++ +G+ AY L++EM +G D +T+ ILI+G
Sbjct: 277 LLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILING 336
Query: 286 LCKAGNIKGARLHLEYMNKIG---------------------------FD--------SN 310
CK GN+K A E M++ G FD +
Sbjct: 337 HCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPD 396
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
L YN +++ G ID A + ME K D TY++++ LC R+ A KL+
Sbjct: 397 LVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID 456
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
K G++ ++ G G ++A +I++++
Sbjct: 457 EMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 493
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 164/330 (49%), Gaps = 16/330 (4%)
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
R++ M L TA+ + +L+ L + A +F + + T+NI+++ L
Sbjct: 109 RLYSRMKSLSLPISTASLHPLLSALP----SAPAFALFADMFRLRLPLCTTTFNIMLRHL 164
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMK-RKGYTF 204
C AG+ A +L+++ PNA+TY T++ C R R + L+I+ M+ R G
Sbjct: 165 CSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGR-VQAALDIMREMRERGGIAP 219
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG-VQLDIVSYNTLINLYCKEGKLEAAYLL 263
+ + Y TVI+ + K+GR+ EA ++M+T G V+ + V YN LI YC +GKL+ A L
Sbjct: 220 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 279
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
D M ++G T+ +L+ L G A +E M G ++ YN +++ K
Sbjct: 280 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCK 339
Query: 324 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
+G + A+ +FE+M + TY+S+++ L K ++ KL ++ G+R
Sbjct: 340 EGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 399
Query: 380 QKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
A+++ SG A +I ++ +I+
Sbjct: 400 YNALINSHSTSGNIDRAFEIMGEMEKKRIA 429
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ + I M G+ VVTY SLI ++ + + L DE +
Sbjct: 332 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR 391
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD+ YN+L++ G D A + +M + P T+N ++ GLC D A
Sbjct: 392 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 451
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + K G P+LVTYN LI G G ++ A I E+ + G P +TY +++
Sbjct: 452 RKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 511
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
+N + ++ M G T D Y ++I
Sbjct: 512 LCKNGQGDDAENMVKEMVENGITPDDSTYISLI 544
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 187/389 (48%), Gaps = 19/389 (4%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
+ NRM +G P+ TY L+ G + + +L + DEMLE GI PDV Y L+ L
Sbjct: 200 ALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSL 259
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
G+ ++A R+ M P T+ + L+GLCK D A F LQ GF L
Sbjct: 260 CNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGL 319
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+ Y+ LI GL +AGR E+ +P+ YT +++ + K +L
Sbjct: 320 IGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDE 379
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
MK KG+ D F Y T++ A +G + A M +M+ + V LD ++N +I CK+G
Sbjct: 380 MKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGL 439
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL----- 311
++ A + DEM + G T+ LIDGL +AG ++ AR+ M ++G + +L
Sbjct: 440 IDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKM-EMGNNPSLFLRLT 498
Query: 312 ---------EAYNCIVDRLGKDGKIDHAIN----VFESMEVKDSFTYSSMVHNLCKAKRL 358
E+ +VD + + G++ A + ES V D TY+++++ LCKAK L
Sbjct: 499 LGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNL 558
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGL 387
A +L G+ + ++DGL
Sbjct: 559 DGALRLFKELQLKGISPDEITYGTLIDGL 587
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 189/406 (46%), Gaps = 23/406 (5%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
+RM + P YN++ ++ +L L + M+ G P+ +Y LM L +
Sbjct: 167 FSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCK 226
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
G +A ++F +M+ + P + ++L+ LC ++A R+ ++++G P+ VT
Sbjct: 227 RGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVT 286
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
Y + + GLCKAGR+ A + L D G I Y+ ++ F+ ++ GL + M
Sbjct: 287 YTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEML 346
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
K + D Y +I F + GR K+A +++M G D YNTL+ G ++
Sbjct: 347 GKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNID 406
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A L+ EM + D TH I+I GLCK G I A + M + G + YN ++
Sbjct: 407 RAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALI 466
Query: 319 DRLGKDGKIDHAINVFESME-----------------VKDSFTYSSMVHNLCKAKRLPSA 361
D L + G ++ A +F ME V+D+ + +V +C++ ++ A
Sbjct: 467 DGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKA 526
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
KLL ++SGV +++GL C+ AK + +R+ K
Sbjct: 527 YKLLRGIIESGVVPDVVTYNTLINGL----CK--AKNLDGALRLFK 566
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 151/351 (43%), Gaps = 58/351 (16%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLI-----AGATRNSLLSCSLDLLDE 56
LID Q FD G + M ISPD+ Y LI AG T+++ L LLDE
Sbjct: 325 LIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFL-----LLDE 379
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
M + G PD + YN+L+ LF +G D A + +M+
Sbjct: 380 MKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEML----------------------- 416
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
++ V + T+NI+I GLCK G + A + E+G+ G P +TY
Sbjct: 417 ------------QNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNA 464
Query: 177 IMKCCFRNRKYKLGLEILSAMKR-------------KGYTFDGFGYCTVIAAFVKIGRLK 223
++ +R + + M+ D ++ + G++
Sbjct: 465 LIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVL 524
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
+A + ++ GV D+V+YNTLIN CK L+ A L E++ +G D+ T+ LI
Sbjct: 525 KAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLI 584
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
DGL +A A + + + + G +L YN ++ L + K+ AIN++
Sbjct: 585 DGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLW 635
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 151/359 (42%), Gaps = 4/359 (1%)
Query: 51 LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 110
D L + G+P ++ +L+ G+ EA F M D P +N +
Sbjct: 129 FDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQV 188
Query: 111 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
L AL ++ + G +P TY +L+ GLCK G A + E+ + G P+
Sbjct: 189 LVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPD 248
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
YT ++ + + +L +MK G D Y ++ K GR+ EA E
Sbjct: 249 VKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFE 308
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+ G L ++ Y+ LI+ + G+ + EM + D +TILI +AG
Sbjct: 309 LLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAG 368
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYS 346
K A L L+ M GF + YN ++ L G ID A ++ M V DS T++
Sbjct: 369 RTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHN 428
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
M+ LCK + A ++ + G A++DGL +G EA+ + K+ M
Sbjct: 429 IMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEM 487
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 139/316 (43%), Gaps = 28/316 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I C+ D + + M E G P V+TYN+LI G R +L + L +M EM
Sbjct: 429 IMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKM-EM 487
Query: 61 GIPP--------------DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 106
G P D S L+ + Q G+ +A ++ + +I + P T+N
Sbjct: 488 GNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNT 547
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
++NGLCK + D ALR+F+ LQ G P+ +TY LI GL +A R A + + + SG
Sbjct: 548 LINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSG 607
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ Y T+M+ R +K + + K Y VIA R
Sbjct: 608 GFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPED--EVIAN----ARKCFED 661
Query: 227 DYMEQMVTDGVQLDIV-------SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
++++ V + +++D V Y + C+ K++ A + +E+ G
Sbjct: 662 GFLDETVKELIKIDQVYGSLNPNPYTIWVIGLCQVRKIDDALRIFHILEEFGIVVTPACC 721
Query: 280 TILIDGLCKAGNIKGA 295
+LI+ LC N+ A
Sbjct: 722 ALLINYLCWDRNLNAA 737
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 184/367 (50%), Gaps = 4/367 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ A +L R+ + P+VV Y+++I G ++ ++ + DL EM+ G
Sbjct: 168 LIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKG 227
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V +Y++L+ F +G+ +A +F MI ++ P TFNI+++G CK+
Sbjct: 228 ISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGK 287
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + K G P +VTY L+ G C + A+ IL + G P+ +Y ++
Sbjct: 288 TVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGF 347
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +K + + M K D Y ++I K+G++ A +++M GV DI
Sbjct: 348 CKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDI 407
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y+++++ CK +++ A LL +++ QG + YT+TILIDGLCK G ++ A E
Sbjct: 408 ITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFED 467
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G++ + Y ++ G D A+ + M+ + D+ TY ++ +L
Sbjct: 468 LLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDE 527
Query: 358 LPSASKL 364
A KL
Sbjct: 528 NDKAEKL 534
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 189/383 (49%), Gaps = 4/383 (1%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G P+ +T+ +LI G + +L D ++ MG D Y +L+H L ++G+ A
Sbjct: 122 GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAA 181
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+ + + + P ++ +++G+CK+++ ++A ++ + G P +VTY+ LI G
Sbjct: 182 LDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 241
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
G+L+ A + ++ P+ T+ ++ ++ K K G + + M ++G +
Sbjct: 242 FFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPN 301
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
YC+++ + + + +A + M GV DI SYN LI+ +CK K++ A L
Sbjct: 302 VVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFK 361
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM + D T+ LIDGLCK G I A ++ M+ G ++ Y+ I+D L K+
Sbjct: 362 EMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNH 421
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
++D AI + ++ + + +TY+ ++ LCK RL A + L G I +
Sbjct: 422 QVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYT 481
Query: 382 AVVDGLRHSGCRREAKKIQSKIR 404
++ G + G EA + SK++
Sbjct: 482 VMIHGFCNKGLFDEALALLSKMK 504
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 166/359 (46%), Gaps = 55/359 (15%)
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM-----FRGL----------- 127
+A +F ++ + TP FN +L L K+++ L + F G+
Sbjct: 59 DAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPH 118
Query: 128 QKHGFVPELVTYNILIK-----------------------------------GLCKAGRL 152
Q G+ P +T+ LIK GLCK G
Sbjct: 119 QLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGET 178
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
R A +L+ + + PN + Y+TI+ +++ ++ S M KG + + Y +
Sbjct: 179 RAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSAL 238
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I+ F +G+LK+A D +M+ + ++ D+ ++N L++ +CK+GK++ + M KQG
Sbjct: 239 ISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGI 298
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
+ + T+ L+DG C + A+ L M++ G + ++++YN ++D K K+D A+N
Sbjct: 299 KPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMN 358
Query: 333 VFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+F+ M + D TY+S++ LCK ++ A KL+ GV +++D L
Sbjct: 359 LFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDAL 417
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 142/298 (47%), Gaps = 36/298 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D +C+ G T+ M + GI P+VVTY SL+ G ++ + +L M +
Sbjct: 272 ILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQR 331
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD+ SYN L+ ++ K DEA +F++M + P T+N +++GLCK A
Sbjct: 332 GVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYA 391
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L++ + G P+++TY+ ++ LCK ++ A +L +L D G PN TYT ++
Sbjct: 392 LKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILID- 450
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
G C K GRL++A + E ++ G +
Sbjct: 451 ---------------------------GLC-------KGGRLEDAHNIFEDLLVKGYNIT 476
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC-KAGNIKGARL 297
+ +Y +I+ +C +G + A LL +M+ D T+ I+I L K N K +L
Sbjct: 477 VNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL 534
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 98/255 (38%), Gaps = 47/255 (18%)
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
N I Y++I N + S + R+ T + ++ + VK
Sbjct: 40 NFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLS 99
Query: 230 EQMVTDGV-----------QL-----DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+QM +G+ QL + +++ TLI C +G++ A L D + GF+
Sbjct: 100 QQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQ 159
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
D+ + LI GLCK G + A L+ + ++ D NL N ++
Sbjct: 160 LDQVGYGTLIHGLCKVGETRAA---LDLLRRV--DGNLVQPNVVM--------------- 199
Query: 334 FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 393
YS+++ +CK K + A L + G+ A++ G G
Sbjct: 200 -----------YSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQL 248
Query: 394 REAKKIQSKIRMAKI 408
++A + +K+ + I
Sbjct: 249 KDAIDLFNKMILENI 263
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 189/413 (45%), Gaps = 39/413 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D Y + S ++ M + G++P N L+ R + L M
Sbjct: 180 VLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGA 239
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GIPPDV++Y++ + + D A +VF++M D T+N+M++GLC++ + A
Sbjct: 240 GIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEA 299
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +G P+ TY L+ GLCK GRL+ A+ +L E+ SG PN + Y T++
Sbjct: 300 FGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDG 359
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K +IL+ M G + Y +I KIG+L A+ + +M+ G + D
Sbjct: 360 FMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPD 419
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC------------- 287
+Y+ L+ + + + A+ LL+EM G + YT+ I+I+GLC
Sbjct: 420 TFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLE 479
Query: 288 ----------------------KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
K G+I A LE M K +L YN ++ L G
Sbjct: 480 EMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVG 539
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
+I+ A + ++ V D FTYS ++H CK + L A +LL L SG++
Sbjct: 540 RIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLK 592
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 194/406 (47%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ +L+ M +G+ P+VV Y +L+ G + + + D+L+EM+ G
Sbjct: 321 LMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAG 380
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ Y++L+ L ++G+ A+++ +MI P T T++ ++ G ++ D A
Sbjct: 381 VQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAF 440
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++ G +P TY I+I GLC+ G + A +L+E+ G PNA Y ++
Sbjct: 441 ELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGH 500
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ L E L M + D F Y ++I +GR++EA +Y Q+ G+ D
Sbjct: 501 SKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDE 560
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y+ LI+ YCK LE A LL +M G + + T+T L++G K+ + + L+
Sbjct: 561 FTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQS 620
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G + Y ++ L + ++ A V +E V D YSS++ LCK
Sbjct: 621 MLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMAD 680
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ A LL K G+ A++DG SG A+ + I
Sbjct: 681 MEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSI 726
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 197/439 (44%), Gaps = 44/439 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D + + + ILN M AG+ P+ + Y++LI G + L + LL+EM+++G
Sbjct: 356 LVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVG 415
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD ++Y+ LM FQ D A + +M + P T+ IM+NGLC+N + A
Sbjct: 416 HRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAG 475
Query: 122 RMFR-----GLQKHGF------------------------------VPELVTYNILIKGL 146
+ GL+ + F +P+L YN LIKGL
Sbjct: 476 NLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGL 535
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
GR+ A ++ G P+ TY+ ++ + R + ++L M G +
Sbjct: 536 STVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNA 595
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y ++ + K ++ + ++ M+ G + D Y +I + +E A+++L E
Sbjct: 596 DTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTE 655
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
+EK G D + ++ LI GLCK +++ A L+ M K G + + YN ++D + G
Sbjct: 656 VEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGD 715
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
I A NVF+S+ K + TY++++ CK + A L L G+ A A
Sbjct: 716 ISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGI-----APDA 770
Query: 383 VVDGLRHSGCRREAKKIQS 401
V + +GC A Q+
Sbjct: 771 FVYNVLATGCSDAADLEQA 789
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 197/415 (47%), Gaps = 7/415 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ CQ +L M G+ P+ Y LI G ++ +S + + L+ M +
Sbjct: 460 IMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKA 519
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD++ YNSL+ L +G+ +EA + + L P T++ +++G CK R + A
Sbjct: 520 NVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKA 579
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + + G P TY L++G K+ IL+ + SG P+ Y +++
Sbjct: 580 DQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRN 639
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R+ ++ +L+ +++ G D Y ++I+ K+ +++A +++M +G++
Sbjct: 640 LSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPG 699
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV YN LI+ +C+ G + A + D + +G + T+T LIDG CK G+I A +
Sbjct: 700 IVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYK 759
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---DSFTYSSMVHNLCKAKR 357
M G + YN + ++ A+ + E M + +S++V CK R
Sbjct: 760 DMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRGR 819
Query: 358 LPSASKLLLSCLKSGVRILKSAQ--KAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
L KLL + I+ +AQ + V+ +G EA ++ ++++ K S
Sbjct: 820 LQETEKLLHVMMDR--EIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQ 872
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 114/239 (47%), Gaps = 4/239 (1%)
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
++L+ K G +RTA ++ +GD G AP ++K R +L ++ M+
Sbjct: 179 DVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEG 238
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
G D + Y T + A K A E+M ++ V+YN +I+ C+ G +E
Sbjct: 239 AGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEE 298
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A+ +EM G D +T+ L++GLCK G +K A+ L+ M+ G N+ Y +VD
Sbjct: 299 AFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVD 358
Query: 320 RLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
K+GK A ++ M + Y +++ LCK +L ASKLL +K G R
Sbjct: 359 GFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHR 417
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 135/304 (44%), Gaps = 6/304 (1%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
TA +++++ KN A ++ + G P N L+K L +A + W LK
Sbjct: 175 TAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELV-WKLK 233
Query: 161 ELGD-SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 219
+ +G P+ TY+T ++ + R + ++ M+R+ + Y +I+ +
Sbjct: 234 GFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRS 293
Query: 220 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
G ++EA + E+MV G+ D +Y L+N CK G+L+ A LLDEM G + + +
Sbjct: 294 GAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVY 353
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-- 337
L+DG K G A L M G N Y+ ++ L K G++ A + M
Sbjct: 354 ATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIK 413
Query: 338 --EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
D+FTY ++ + A +LL SG+ +++GL +G +E
Sbjct: 414 VGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKE 473
Query: 396 AKKI 399
A +
Sbjct: 474 AGNL 477
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 182/346 (52%), Gaps = 4/346 (1%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
+ ISP+V+++N +I + L+ ++++ EM PDV++Y +LM L + + D
Sbjct: 165 KTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRID 224
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
EA + +M P + TFN+++NGLCK ++ + G VP VTYN +I
Sbjct: 225 EAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTII 284
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
GLC G+L A +L + S PN +TY T++ + + G+ +LS+++ +G+
Sbjct: 285 NGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHH 344
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
+ + Y T+I+ K + +EA ++MV G Q +IV Y+ LI+ C+EGKL+ A +
Sbjct: 345 ANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEI 404
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
L EM +G + +T++ LI G K GN + A + M K N Y+ ++ L +
Sbjct: 405 LCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCE 464
Query: 324 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
DGK+ A+ ++ M + D YSSM+H LC A + KL
Sbjct: 465 DGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLF 510
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 173/378 (45%), Gaps = 6/378 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I A C+ D + M PDV TY +L+ G + + ++ LLDEM
Sbjct: 177 LVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIE 236
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P ++N L++ L + G ++ +M P T+N ++NGLC D A
Sbjct: 237 GCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKA 296
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + VP VTY LI GL K GR +L L + GH N Y+T++
Sbjct: 297 VSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISG 356
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+ K + + + M KG + Y +I + G+L EA + + +MV G +
Sbjct: 357 LFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPN 416
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y++LI + K G + A + EM K ++ +++LI GLC+ G ++ A +
Sbjct: 417 AFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWT 476
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF------ESMEVKDSFTYSSMVHNLCK 354
+M G ++ AY+ ++ L G ++ + +F ES D TY+ ++ LCK
Sbjct: 477 HMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCK 536
Query: 355 AKRLPSASKLLLSCLKSG 372
+ A LL S L G
Sbjct: 537 QNSISHAIDLLNSMLDRG 554
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 173/367 (47%), Gaps = 6/367 (1%)
Query: 31 VVTYNSLIAGATRNSLLSCSLDLLDEML--EMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
V ++NS++ + L +L+ + + + I P+V S+N ++ + +LG D A V
Sbjct: 135 VRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEV 194
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
F++M P T+ +++GLCK D A+ + +Q G P VT+N+LI GLCK
Sbjct: 195 FREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCK 254
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
G + ++ + G PN +TY TI+ K + +L M +
Sbjct: 255 KGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVT 314
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y T+I VK GR + + + G + +Y+TLI+ KE K E A L +M
Sbjct: 315 YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMV 374
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
++G + + ++ LIDGLC+ G + A+ L M G N Y+ ++ K G
Sbjct: 375 EKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQ 434
Query: 329 HAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 384
AI V++ M V + YS ++H LC+ +L A + L G+R A +++
Sbjct: 435 KAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMI 494
Query: 385 DGLRHSG 391
GL ++G
Sbjct: 495 HGLCNAG 501
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 165/363 (45%), Gaps = 20/363 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C D ++L+RM + P+ VTY +LI G + + LL + E G
Sbjct: 283 IINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 342
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ ++Y++L+ LF+ K +EA +++ M+ P ++ +++GLC+ D A
Sbjct: 343 HHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAK 402
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P TY+ LIKG K G + A + KE+ + PN I Y+ ++
Sbjct: 403 EILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGL 462
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV--TDGVQL 239
+ K + + + + M +G D Y ++I G ++ +M+ Q
Sbjct: 463 CEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQP 522
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+V+YN L+ CK+ + A LL+ M +G D T I ++ L + N +
Sbjct: 523 DVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLN--PPQDGR 580
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
E++++ +V RL K +I A + E M K ++ T+ ++ LCK
Sbjct: 581 EFLDE------------LVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKP 628
Query: 356 KRL 358
K++
Sbjct: 629 KKV 631
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 186/417 (44%), Gaps = 52/417 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRM---REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
LI+ Y F + + +RM R I + + + + L +++L M+
Sbjct: 70 LIENYANSGDFGTLFQVFDRMKRERRVFIEKNFIL---VFRAYGKAHLPEKAIELFGRMV 126
Query: 59 -EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG--DLTPCTATFNIMLNGLCKNR 115
E V S+NS+++ + Q G A ++ + G +++P +FN+++ +CK
Sbjct: 127 DEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLG 186
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D A+ +FR + P++ TY L+ GLCK R+ A +L E+ G P+++T+
Sbjct: 187 LVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFN 246
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
++ G C K G + T ++ M
Sbjct: 247 VLIN----------------------------GLC-------KKGDMVRVTKLVDNMFLK 271
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG-NIKG 294
G + V+YNT+IN C +GKL+ A LLD M + T+ LI+GL K G ++ G
Sbjct: 272 GCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDG 331
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 350
L L + + G +N AY+ ++ L K+ K + A+ +++ M K + YS+++
Sbjct: 332 VHL-LSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALID 390
Query: 351 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
LC+ +L A ++L + G +++ G +G ++A ++ + MAK
Sbjct: 391 GLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKE--MAK 445
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 199/412 (48%), Gaps = 11/412 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ + D +L +M EAG P+ +TYNSLI G + + + + S+ + +M
Sbjct: 265 LIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSC 324
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P V + NS +H LF+ G+ +EA +F M+ P +++ ML+G TD+
Sbjct: 325 GVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT--ATDSC 382
Query: 121 L----RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
L +F + G P +NILI + G + A I +++ + G P+ +T+ T
Sbjct: 383 LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFAT 442
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ R + L + M G Y +I G L +A + + +M+
Sbjct: 443 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 502
Query: 237 VQLDIVSY-NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
+ V Y +++IN CKEG++ ++D M + G + T L++G C GN++ A
Sbjct: 503 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 562
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 351
L+ M IG + N Y +VD K+G+ID A+ VF M K S YS ++H
Sbjct: 563 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 622
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L +A+R +A K+ ++SG + V+ GL + C EA + K+
Sbjct: 623 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 674
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 181/381 (47%), Gaps = 8/381 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID Y + D G I+ R+ + G+ PD +Y SLI G ++ + + L EM+E
Sbjct: 161 ILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQ 219
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P + NS++ L ++ + D+A + Q M+ + P T++++++GLCK++ D A
Sbjct: 220 GVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA 279
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+ + + G P +TYN LI G +G + + K++ G P + +
Sbjct: 280 ERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHA 339
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR--LKEATDYMEQMVTDGVQ 238
F++ + I +M KG D Y T++ + L + + M+T G+
Sbjct: 340 LFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIA 399
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+ +N LIN Y + G ++ A L+ ++M+ +G D T +I LC+ G + A
Sbjct: 400 PNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 459
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHNLC 353
+M IG + Y C++ G++ A + M KD +SS+++NLC
Sbjct: 460 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 519
Query: 354 KAKRLPSASKLLLSCLKSGVR 374
K R+ ++ +++G R
Sbjct: 520 KEGRVAEGKDIMDMMVQTGQR 540
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 163/370 (44%), Gaps = 5/370 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+AY + D I M+ G+ PD VT+ ++I+ R L +L + M+++
Sbjct: 407 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 466
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT-FNIMLNGLCKNRYTDN 119
G+PP Y L+ G+ +A + +M+ D+ P F+ ++N LCK
Sbjct: 467 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAE 526
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+ + + G P +VT+N L++G C G + A +L + G PN Y T++
Sbjct: 527 GKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 586
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+N + L + M KG Y ++ + R A +M+ G +
Sbjct: 587 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTV 646
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
I +Y ++ C+ + A +LL+++ + D T I+I + K G + A+
Sbjct: 647 SIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 706
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
+ ++ G N++ Y+ ++ L K+ + A N+F S+E DS + +V L
Sbjct: 707 DAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNK 766
Query: 356 KRLPSASKLL 365
+ AS L
Sbjct: 767 AEVAKASNYL 776
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 167/347 (48%), Gaps = 7/347 (2%)
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
PP + +YN L+ C ++ +PD + ++ L P +++++ G K+ D A
Sbjct: 153 PPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIY-GFVKDGEVDKAHC 211
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+F + + G +P+++ N +IK LCK + A I++++ DSG AP+ TY+ I+
Sbjct: 212 LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 271
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+++ +L M G + Y ++I + G E+ +QM + GV +
Sbjct: 272 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 331
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH--LE 300
+ N+ I+ K G+ A + D M +G + D +++ ++ G A + A +H
Sbjct: 332 NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFN 391
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M G N +N +++ + G +D A+ +FE M+ + D+ T+++++ +LC+
Sbjct: 392 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 451
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
RL A + GV ++ ++ G + G +AK++ S++
Sbjct: 452 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 498
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 129/260 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ YC + + + +L+ M GI P+ Y +L+ G +N + +L + +ML G
Sbjct: 549 LMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG 608
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P Y+ ++H LFQ + A ++F +MI T T+ ++L GLC+N TD A
Sbjct: 609 VKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEAN 668
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L +++T+NI+I + K GR + A+ + + G PN TY+ ++
Sbjct: 669 MLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNL 728
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ Y+ + ++++ G+ D ++ + + +A++Y+ + + + L+
Sbjct: 729 IKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEA 788
Query: 242 VSYNTLINLYCKEGKLEAAY 261
+ + L +L+ +EG ++ +
Sbjct: 789 STISLLASLFSREGMIKGLF 808
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 11/227 (4%)
Query: 153 RTARWILKELGDSGHAPNAI-TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
R RW H+P I TY ++ C R + LGL I+ + + G D F Y +
Sbjct: 142 RMDRWACPR-----HSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-S 195
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+I FVK G + +A +M+ GV I+ N++I CK +++ A ++ +M G
Sbjct: 196 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 255
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
D +T++++IDGLCK+ + A LE M + G N YN ++ G + ++
Sbjct: 256 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 315
Query: 332 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
VF+ M + +S +H L K R A + S + G +
Sbjct: 316 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPK 362
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 199/412 (48%), Gaps = 11/412 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ + D +L +M EAG P+ +TYNSLI G + + + + S+ + +M
Sbjct: 285 LIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSC 344
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P V + NS +H LF+ G+ +EA +F M+ P +++ ML+G TD+
Sbjct: 345 GVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT--ATDSC 402
Query: 121 L----RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
L +F + G P +NILI + G + A I +++ + G P+ +T+ T
Sbjct: 403 LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFAT 462
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ R + L + M G Y +I G L +A + + +M+
Sbjct: 463 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 522
Query: 237 VQLDIVSY-NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
+ V Y +++IN CKEG++ ++D M + G + T L++G C GN++ A
Sbjct: 523 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 582
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 351
L+ M IG + N Y +VD K+G+ID A+ VF M K S YS ++H
Sbjct: 583 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 642
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L +A+R +A K+ ++SG + V+ GL + C EA + K+
Sbjct: 643 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 694
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 181/381 (47%), Gaps = 8/381 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID Y + D G I+ R+ + G+ PD +Y SLI G ++ + + L EM+E
Sbjct: 181 ILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQ 239
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P + NS++ L ++ + D+A + Q M+ + P T++++++GLCK++ D A
Sbjct: 240 GVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA 299
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+ + + G P +TYN LI G +G + + K++ G P + +
Sbjct: 300 ERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHA 359
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR--LKEATDYMEQMVTDGVQ 238
F++ + I +M KG D Y T++ + L + + M+T G+
Sbjct: 360 LFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIA 419
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+ +N LIN Y + G ++ A L+ ++M+ +G D T +I LC+ G + A
Sbjct: 420 PNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 479
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHNLC 353
+M IG + Y C++ G++ A + M KD +SS+++NLC
Sbjct: 480 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 539
Query: 354 KAKRLPSASKLLLSCLKSGVR 374
K R+ ++ +++G R
Sbjct: 540 KEGRVAEGKDIMDMMVQTGQR 560
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 163/370 (44%), Gaps = 5/370 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+AY + D I M+ G+ PD VT+ ++I+ R L +L + M+++
Sbjct: 427 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 486
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT-FNIMLNGLCKNRYTDN 119
G+PP Y L+ G+ +A + +M+ D+ P F+ ++N LCK
Sbjct: 487 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAE 546
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+ + + G P +VT+N L++G C G + A +L + G PN Y T++
Sbjct: 547 GKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 606
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+N + L + M KG Y ++ + R A +M+ G +
Sbjct: 607 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTV 666
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
I +Y ++ C+ + A +LL+++ + D T I+I + K G + A+
Sbjct: 667 SIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 726
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
+ ++ G N++ Y+ ++ L K+ + A N+F S+E DS + +V L
Sbjct: 727 DAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNK 786
Query: 356 KRLPSASKLL 365
+ AS L
Sbjct: 787 AEVAKASNYL 796
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 127/255 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ YC + + + +L+ M GI P+ Y +L+ G +N + +L + +ML G
Sbjct: 569 LMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG 628
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P Y+ ++H LFQ + A ++F +MI T T+ ++L GLC+N TD A
Sbjct: 629 VKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEAN 688
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L +++T+NI+I + K GR + A+ + + G PN TY+ ++
Sbjct: 689 MLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNL 748
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ Y+ + ++++ G+ D ++ + + +A++Y+ + + + L+
Sbjct: 749 IKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEA 808
Query: 242 VSYNTLINLYCKEGK 256
+ + L +L+ +EGK
Sbjct: 809 STISLLASLFSREGK 823
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 167/347 (48%), Gaps = 7/347 (2%)
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
PP + +YN L+ C ++ +PD + ++ L P +++++ G K+ D A
Sbjct: 173 PPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIY-GFVKDGEVDKAHC 231
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+F + + G +P+++ N +IK LCK + A I++++ DSG AP+ TY+ I+
Sbjct: 232 LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 291
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+++ +L M G + Y ++I + G E+ +QM + GV +
Sbjct: 292 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 351
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH--LE 300
+ N+ I+ K G+ A + D M +G + D +++ ++ G A + A +H
Sbjct: 352 NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFN 411
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M G N +N +++ + G +D A+ +FE M+ + D+ T+++++ +LC+
Sbjct: 412 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 471
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
RL A + GV ++ ++ G + G +AK++ S++
Sbjct: 472 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 518
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 151/339 (44%), Gaps = 7/339 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTY-NSLIAGATRNSLLSCSLDLLDEMLEM 60
LI C +++ M I P V Y +S+I + ++ D++D M++
Sbjct: 498 LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQT 557
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V ++NSLM +G +EA + M + P + +++G CKN D+A
Sbjct: 558 GQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 617
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +FR + G P V Y+I++ GL +A R A+ + E+ +SG + TY ++
Sbjct: 618 LTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGG 677
Query: 181 CFRNR---KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
RN + + LE L AM K FD + VI+A K+GR +EA + + + T G+
Sbjct: 678 LCRNNCTDEANMLLEKLFAMNVK---FDIITFNIVISAMFKVGRRQEAKELFDAISTYGL 734
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+I +Y+ +I KE E A L +EK G D ++ L + A
Sbjct: 735 VPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASN 794
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
+L + + + + ++GK I + +
Sbjct: 795 YLSIIGENNLTLEASTISLLASLFSREGKYREHIKLLPA 833
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 11/227 (4%)
Query: 153 RTARWILKELGDSGHAPNAI-TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
R RW H+P I TY ++ C R + LGL I+ + + G D F Y +
Sbjct: 162 RMDRWACPR-----HSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-S 215
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+I FVK G + +A +M+ GV I+ N++I CK +++ A ++ +M G
Sbjct: 216 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 275
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
D +T++++IDGLCK+ + A LE M + G N YN ++ G + ++
Sbjct: 276 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 335
Query: 332 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
VF+ M + +S +H L K R A + S + G +
Sbjct: 336 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPK 382
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 194/395 (49%), Gaps = 4/395 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ + + + ++M E G P TY LI L+ + +L DEM+
Sbjct: 271 ILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIAR 330
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V +Y L+ L + GK +EAN V + M+ + P T+N ++NG CK+ A
Sbjct: 331 GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPA 390
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++K P + T+N L++GLC+ G+ A +LK + D+G +P+ ++Y ++
Sbjct: 391 FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + ++L++M D + +I AF K G+ A+ ++ M+ G+ LD
Sbjct: 451 LCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD 510
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+ TLI+ C GK A +L+ + K ++ +++D L K +K L
Sbjct: 511 EVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLG 570
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
+NK+G ++ Y +VD L + G I + + E M++ + + Y+ +++ LC+
Sbjct: 571 KINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFG 630
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
R+ A KLL + SGV +V G ++G
Sbjct: 631 RVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG 665
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 197/414 (47%), Gaps = 7/414 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L+ +C+ ++ + + M RE +P+ V+Y+ LI G L + L D+M E
Sbjct: 236 LLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK 295
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +Y L+ L G D+A +F +MI P T+ ++++GLC++ + A
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK- 179
+ R + K G P ++TYN LI G CK GR+ A +L + PN T+ +M+
Sbjct: 356 NGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
C + YK + +L M G + D Y +I + G + A + M + ++
Sbjct: 416 LCRVGKPYK-AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEP 474
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D +++ +IN +CK+GK + A L M ++G D+ T T LIDG+C G + A L
Sbjct: 475 DCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFIL 534
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
E + K+ + + N I+D L K K+ + + + V TY+++V L ++
Sbjct: 535 ETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRS 594
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+ + ++L SG +++GL G EA+K+ S ++ + +S
Sbjct: 595 GDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 187/409 (45%), Gaps = 48/409 (11%)
Query: 46 LLSCSLDLLDEMLEM-GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF 104
L+SC DE+ E+ G + Y+SL+ L +L A ++ M +
Sbjct: 143 LISC----FDELREVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDY 198
Query: 105 NIMLNGLCKNRYTD-----------------------------------NALRMFRGLQK 129
++N LCKN YT+ +AL++F + +
Sbjct: 199 RTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSR 258
Query: 130 HGF-VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
G P V+Y+ILI GLC+ GRL A + ++G+ G P+ TYT ++K
Sbjct: 259 EGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLID 318
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
+ M +G + Y +I + G+++EA +MV DG+ +++YN LI
Sbjct: 319 KAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALI 378
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
N YCK+G++ A+ LL MEK+ + + T L++GLC+ G A L+ M G
Sbjct: 379 NGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLS 438
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKL 364
++ +YN ++D L ++G ++ A + SM D T++++++ CK + AS
Sbjct: 439 PDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAF 498
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS---KIRMAKISH 410
L L+ G+ + + ++DG+ + G R+A I K+RM H
Sbjct: 499 LGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPH 547
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 188/410 (45%), Gaps = 16/410 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ +L RM + G+SPD+V+YN LI G R ++ + LL M
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFD 471
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD ++ ++++ + GK D A+ M+ ++ T +++G+C T +AL
Sbjct: 472 LEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDAL 531
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L K + + N+++ L K +L+ +L ++ G P+ +TYTT++
Sbjct: 532 FILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGL 591
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ +L MK G + + Y +I + GR++EA + M GV +
Sbjct: 592 IRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLE 300
V+Y ++ Y GKL+ A + M ++G+E + ++ L+ G + KG R E
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQ--KGIRETDPE 709
Query: 301 YMNKI--------GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS---MV 349
+ ++ G S L + +V RL K+G+ D + + +++ F + ++
Sbjct: 710 CIKELISVVEQLGGSTSGLCIF--LVTRLCKEGRTDESNGLVQTILKSGVFLEKAIDIIM 767
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ C K+ +L+ LKSG + V+ GL+ G A+++
Sbjct: 768 ESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERAREL 817
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 152/380 (40%), Gaps = 49/380 (12%)
Query: 34 YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
YN+ + ++R S S + + P+ W NS + L P+ A++V
Sbjct: 22 YNAFFSVSSRPSQFSSDQVAAHNVASLLKSPN-WEKNSSLKSLVSHMSPNVASQVIS--- 77
Query: 94 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG-FVPELVTYNILIKGLCKAGRL 152
+ D +R F + KH + + N L+K + +G
Sbjct: 78 ------------------LQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLF 119
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR----KGYTFDGFG 208
R A ++ L I +C +R K L+++S G+ +
Sbjct: 120 RVAHDVIVAL--------------IREC---SRCEKEMLKLISCFDELREVSGFRLNYPC 162
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y +++ + K+ A +M DG + ++ Y T++N CK G EAA + + ++
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKIL 222
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF-DSNLEAYNCIVDRLGKDGKI 327
K GF D + T L+ G C+ N++ A + M++ G N +Y+ ++ L + G++
Sbjct: 223 KVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRL 282
Query: 328 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
+ A + + M K + TY+ ++ LC + A L + G + +
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVL 342
Query: 384 VDGLRHSGCRREAKKIQSKI 403
+DGL G EA + K+
Sbjct: 343 IDGLCRDGKIEEANGVCRKM 362
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 183/373 (49%), Gaps = 4/373 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C G M G P+VVTYN+LI + + + LL M
Sbjct: 15 ILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSK 74
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P++ SYN +++ L + G EA + ++M TP T+N +LNG CK A
Sbjct: 75 GMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQA 134
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + ++G P +VTY LI +CKA L A ++ G PN TYTT++
Sbjct: 135 LVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDG 194
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R IL+ M G++ Y I + R++EA +++MV G+ D
Sbjct: 195 FSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPD 254
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+VSY+T+I+ +C++G+L+ A+ + EM ++G D T++ LI GLC+ + A +
Sbjct: 255 VVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQ 314
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M +G + Y +++ +G ++ A+++ + M K D+ TYS +++ L K
Sbjct: 315 EMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQA 374
Query: 357 RLPSASKLLLSCL 369
R A +LL +
Sbjct: 375 RTREAKRLLFKLI 387
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 181/381 (47%), Gaps = 4/381 (1%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
+SP+V TYN LI G L L EM G P+V +YN+L+ ++G+ DEA
Sbjct: 6 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ + M + P ++N+++NGLC+ A + + GF P+ VTYN L+ G
Sbjct: 66 GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK G A I E+ +G +P+ +TYT ++ + R +E M+ +G +
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T+I F + G L EA + +M G +V+YN I+ +C ++E A ++ E
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 245
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M ++G D +++ +I G C+ G + A + M + G + Y+ ++ L + +
Sbjct: 246 MVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRR 305
Query: 327 IDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+ A ++ + M D FTY+++++ C L A L + G
Sbjct: 306 LTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSV 365
Query: 383 VVDGLRHSGCRREAKKIQSKI 403
+++GL REAK++ K+
Sbjct: 366 LINGLNKQARTREAKRLLFKL 386
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 171/369 (46%), Gaps = 15/369 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ YC+ +F I M G+SP VVTY +LI + L+ +++ D+M G
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +Y +L+ + G +EA R+ +M +P T+N ++G C + AL
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + + G P++V+Y+ +I G C+ G L A + +E+ + G +P+A+TY+++++
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ ++ M G D F Y T+I A+ G L +A ++M+ G D
Sbjct: 301 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDA 360
Query: 242 VSYNTLINLYCKEGKL-EAAYLLLDEMEKQGFECDKYTHTI--------------LIDGL 286
V+Y+ LIN K+ + EA LL + ++ D T+ LI G
Sbjct: 361 VTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGF 420
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYS 346
C G + A E M + YN I+ + G + A N+++ M ++
Sbjct: 421 CMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHT 480
Query: 347 SMVHNLCKA 355
V L KA
Sbjct: 481 VTVITLIKA 489
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 175/396 (44%), Gaps = 41/396 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
I +C + ++ M E G++PDVV+Y+++I+G R L + + EM+E G
Sbjct: 226 FIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKG 285
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y+SL+ L ++ + EA + Q+M+ L P T+ ++N C + AL
Sbjct: 286 VSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKAL 345
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + GF+P+ VTY++LI GL K R R A+ +L +L P+ +TY T+++ C
Sbjct: 346 HLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENC 405
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N ++K +I F G + EA E MV +
Sbjct: 406 -SNIEFK-------------------SVVALIKGFCMKGLMHEADRVFESMVERNHKPGE 445
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG------NIKGA 295
YN +I+ +C+ G L A+ L EM GF T LI L K G + G
Sbjct: 446 AVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGD 505
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA 355
L +N+ E +V+ K+G ++ +NV + + + + ++
Sbjct: 506 TLRSCRLNEA------ELAKVLVEINHKEGNMEAVLNV---SRLYNKLSLKCVASSVPPG 556
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
++ K+ LS RI+ + VDG H G
Sbjct: 557 ALTQTSQKIFLS------RIIANFDGTAVDGAAHVG 586
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 181/376 (48%), Gaps = 10/376 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ D Y + RMR++G D VT+ +LI + + L + +L EM+E
Sbjct: 164 VLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIER 223
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P + +SL+ L + GK DEAN ++Q ++ + +N +++G CK D+
Sbjct: 224 GYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDG 283
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L++ + + P++ TYNIL+ G +A RL A + K L G PNA TYTTI++
Sbjct: 284 LKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQG 343
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ + D Y TVI R+ EA + E++ T G +
Sbjct: 344 LYDAQRMEEAKAFFDE------ALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPN 397
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+Y +I+ K G++E ++M + T+T++IDGLCKA + A E
Sbjct: 398 VVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFE 457
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + G + Y ++D K K+D A + + M K + TY S+VH CK
Sbjct: 458 QMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLD 517
Query: 357 RLPSASKLLLSCLKSG 372
+ A +++ + G
Sbjct: 518 MINEAKEVIAQMRERG 533
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 186/394 (47%), Gaps = 5/394 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID + + G M + P TY +I G + +L + + ++M++ G
Sbjct: 404 VIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKG 463
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +Y +L+ + K DEA ++ M+ P T+ +++G CK + A
Sbjct: 464 CVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAK 523
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ +++ G P L + L+ GR A +L E+ G AP+ I YT+++
Sbjct: 524 EVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLL 583
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F + + +M KG D Y T+I F KIG ++ A + +E M GV D
Sbjct: 584 FSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDC 643
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLE 300
+YN+L++ Y K +++ A+ + D M G + + T +L+ GL K G A L E
Sbjct: 644 FAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKE 703
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
+ K L +Y ++D LGK G++ A + F+ M + + TY+S++++L KA
Sbjct: 704 MLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAG 763
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
R+P A KL+ +K GV A A++ GL S
Sbjct: 764 RIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDS 797
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 186/397 (46%), Gaps = 7/397 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ + +M + G PD +TY +LI G ++ S + + LLD ML
Sbjct: 438 VVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK 497
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +Y S++H +L +EA V M P F +L+ + A
Sbjct: 498 GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEA 557
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G P+++ Y LI L GR+ AR + + + G AP+A+TY TI++
Sbjct: 558 YQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQN 617
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + EIL M + G D F Y +++ +VK+ R+ +A ++MV G++ +
Sbjct: 618 FSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPN 677
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
V++N L++ K+GK + A+ L EM EK ++TILIDGL KAG + A
Sbjct: 678 AVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQF 737
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-----DSFTYSSMVHNLCK 354
+ M G Y ++ L K G+I A + E M VK D YS+++ L
Sbjct: 738 QEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDM-VKLGVNPDVQAYSALITGLID 796
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ + +A + +K G + K + G R +G
Sbjct: 797 SSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 833
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 186/423 (43%), Gaps = 33/423 (7%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D YC+ D G +L +M E PD+ TYN L+AG +R + L +L+L + G
Sbjct: 270 LMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYG 329
Query: 62 IPP-----------------------------DVWSYNSLMHCLFQLGKPDEANRVFQDM 92
P DV SY +++ L + DEA +F+ +
Sbjct: 330 CKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKL 389
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
+P + +++GL K ++ L+ F + VP TY ++I GLCKA L
Sbjct: 390 KTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQML 449
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
A + +++ G P+ ITYTT++ + K ++L M KG Y ++
Sbjct: 450 PDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSI 509
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
+ F K+ + EA + + QM G + + + +L++ Y +G+ E AY +L EM +G
Sbjct: 510 VHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGC 569
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
D +T LID L G + AR + M + G + Y I+ K G ++ A
Sbjct: 570 APDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGE 629
Query: 333 VFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
+ E M D F Y+S++ K +R+ A + + SG++ ++ GL
Sbjct: 630 ILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLF 689
Query: 389 HSG 391
G
Sbjct: 690 KDG 692
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 181/407 (44%), Gaps = 10/407 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I YC+ D G+ IL M AG PD Y LI + + + +L + M + G
Sbjct: 130 VIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSG 189
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
D ++ +L+ L GK DEA ++++MI P + ++ LCK D A
Sbjct: 190 CLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEAN 249
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + V YN L+ G CK GR+ +L ++ + + P+ TY ++
Sbjct: 250 EIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGF 309
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + LE+ + G + Y T+I R++EA + ++ LD+
Sbjct: 310 SRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE------ALDV 363
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+SY T+I +++ A L ++++ G + +T +IDGL KAG I+ + E
Sbjct: 364 ISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFED 423
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M+ Y ++D L K + A VFE M V D+ TY++++ KA +
Sbjct: 424 MSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASK 483
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A KLL L G ++V G EAK++ +++R
Sbjct: 484 MDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMR 530
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 182/395 (46%), Gaps = 11/395 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++ C+ D + M G P +V+YN++I+G + + + M++
Sbjct: 25 IVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDN 84
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV ++ +L+H + G+P + + + P + +++G CK D
Sbjct: 85 GCEPDVIAFTTLIHGFCKAGQP-QVGHMLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTG 143
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G +P+ Y +LI LCK GR+ A + + + SG + +T+ T+++
Sbjct: 144 FKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEA 203
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K E+ M +GY ++I A K G++ EA + + +V V
Sbjct: 204 LSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATS 263
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY----THTILIDGLCKAGNIKGAR 296
V+YN+L++ YCK G+++ LL +M ECD + T+ IL+ G +A + A
Sbjct: 264 RVAYNSLMDGYCKLGRVDDGLKLLLQM----VECDNFPDIQTYNILVAGFSRANRLDDAL 319
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAK 356
+ ++ G N Y I+ L +++ A F+ E D +Y++++ L +K
Sbjct: 320 ELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFD--EALDVISYTTVIKGLADSK 377
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
R+ A +L +G A AV+DGL +G
Sbjct: 378 RIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAG 412
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 185/403 (45%), Gaps = 27/403 (6%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
L M G+ PDVV N ++ G + + +++L EM MG P + SYN+++ L
Sbjct: 8 LKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLAS 67
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK-------NRYTDNALRMFRGLQKHG 131
+ K DEA + F MI P F +++G CK + + AL+ FR
Sbjct: 68 IDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFR------ 121
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
P++ Y +I G CKAG L T IL+E+ +G P+A Y ++ + +
Sbjct: 122 --PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
E+ M++ G D + T+I A G+L EA + +M+ G + + ++LI
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFAL 239
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 310
CK GK++ A + + + + + L+DG CK G + G +L L+ + F +
Sbjct: 240 CKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNF-PD 298
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLL 366
++ YN +V + ++D A+ +F+ + ++ TY++++ L A+R+ A
Sbjct: 299 IQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFD 358
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
L + V+ GL S EA ++ K++ A S
Sbjct: 359 EALDV------ISYTTVIKGLADSKRIDEACELFEKLKTAGCS 395
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 162/352 (46%), Gaps = 5/352 (1%)
Query: 50 SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 109
+LD L EM G+ PDV + N +++ L + K D+A +F +M P ++N +++
Sbjct: 4 ALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVIS 63
Query: 110 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 169
GL D A + F + +G P+++ + LI G CKAG+ + +L + P
Sbjct: 64 GLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQ-ALKRFRP 122
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
+ YT+++ + G +IL M G D Y +I K+GR+ EA +
Sbjct: 123 DVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELF 182
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
E+M G D V++ TLI GKL+ A L EM ++G+E LI LCKA
Sbjct: 183 ERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKA 242
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TY 345
G + A + + ++ AYN ++D K G++D + + M D+F TY
Sbjct: 243 GKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTY 302
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
+ +V +A RL A +L G + + ++ GL + EAK
Sbjct: 303 NILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAK 354
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 149/294 (50%), Gaps = 9/294 (3%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
+EA ++M L P NI+LNGLCK R D A+ +F + G P +V+YN +
Sbjct: 2 EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS-AMKRKG 201
I GL ++ A + D+G P+ I +TT++ + + ++G +L+ A+KR
Sbjct: 62 ISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR-- 119
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ D F Y +VI + K G L +E+M+ G D +Y LI+ CK G+++ AY
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDR 320
L + M K G D T LI+ L G + A L+ E + + G++ LE + ++
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIER-GYEPYLEVQDSLIFA 238
Query: 321 LGKDGKIDHAINVFESMEVKDSFT----YSSMVHNLCKAKRLPSASKLLLSCLK 370
L K GK+D A +++++ K T Y+S++ CK R+ KLLL ++
Sbjct: 239 LCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVE 292
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 119/240 (49%), Gaps = 2/240 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I + + + +A IL M ++G+ PD YNSL+ G + + + + D M+ G
Sbjct: 614 IIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASG 673
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT-ATFNIMLNGLCKNRYTDNA 120
I P+ ++N LMH LF+ GK D A +F++M+ D P T ++ I+++GL K A
Sbjct: 674 IKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEA 733
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
F+ + G +PE TY LI L KAGR+ A+ +++++ G P+ Y+ ++
Sbjct: 734 FSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITG 793
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ M ++G + Y + F GR + + ++Q + GV ++
Sbjct: 794 LIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALD-LEAVKQHFSQGVAME 852
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
++EA D +++M T G+ D+V+ N ++N CK K++ A L EM G E ++
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK-------IDHAINVF 334
+I GL + A M G + ++ A+ ++ K G+ ++ A+ F
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120
Query: 335 ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
D F Y+S++H CKA L + K+L L +G +A ++D L G
Sbjct: 121 RP----DVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVD 176
Query: 395 EAKKIQSKIR 404
EA ++ ++R
Sbjct: 177 EAYELFERMR 186
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 189/389 (48%), Gaps = 39/389 (10%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L +G + DV YN+L+AG R L + L+ M + PD ++Y ++ L
Sbjct: 100 VLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLI---ASMPVAPDAYTYTPIIRGLC 156
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
G+ EA + DM+ P T+ ++L +CK+ A+ + ++ G P +V
Sbjct: 157 DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIV 216
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN++I G+C+ GR+ AR L L G P+ ++YTT++K ++++ E+ + M
Sbjct: 217 TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 276
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K + + ++ F + G ++ A +EQM G + N +IN CK+G++
Sbjct: 277 MEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRV 336
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKA---------------------------- 289
+ A+ L+ M G D ++T ++ GLC+A
Sbjct: 337 DDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTF 396
Query: 290 -------GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-D 341
G I+ A + +E M++ G + N+ YN +V+ G++D A+ +F SM K +
Sbjct: 397 ICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPN 456
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
+ TY++++ LC A+RL +A++LL L+
Sbjct: 457 TITYTTLLTGLCNAERLDAAAELLAEMLQ 485
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 188/377 (49%), Gaps = 7/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++A C+ F +L+ MR G +P++VTYN +I G R + + + L+ +
Sbjct: 185 VLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSY 244
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD SY +++ L + ++ +F +M+ + P TF++++ C+ + A
Sbjct: 245 GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERA 304
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + HG NI+I +CK GR+ A L +G G +P+ I+YTT++K
Sbjct: 305 IQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKG 364
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R +++ E+L M RK + + T I + G +++AT +EQM G +++
Sbjct: 365 LCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVN 424
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+YN L+N +C +G++++A L M + + T+T L+ GLC A + A L
Sbjct: 425 IVTYNALVNGFCVQGRVDSALELFYSMPCKP---NTITYTTLLTGLCNAERLDAAAELLA 481
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + N+ +N +V + G +D AI + E M + TY++++ +
Sbjct: 482 EMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDC 541
Query: 357 RLPSASKLLLSCLKSGV 373
A +LL + +GV
Sbjct: 542 NSEEALELLHGLVSNGV 558
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 150/324 (46%), Gaps = 3/324 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ D + LN M G SPD ++Y +++ G R + +LL EM+
Sbjct: 325 IVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK 384
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PP+ ++N+ + L Q G ++A + + M T+N ++NG C D+A
Sbjct: 385 NCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSA 444
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F + P +TY L+ GLC A RL A +L E+ APN +T+ ++
Sbjct: 445 LELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSF 501
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ +E++ M G T + Y T++ +EA + + +V++GV D
Sbjct: 502 FCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPD 561
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+Y+++I + +E ++E A + ++ G + ++ LCK N GA
Sbjct: 562 IVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFA 621
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKD 324
YM G N Y +++ L +
Sbjct: 622 YMVSNGCMPNELTYITLIEGLANE 645
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 165/377 (43%), Gaps = 7/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
ML+ +C+ + +L +M G + + N +I + + + L+ M
Sbjct: 290 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 349
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD SY +++ L + + ++A + ++M+ + P TFN + LC+ + A
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 409
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + +HG +VTYN L+ G C GR+ +A + + PN ITYTT++
Sbjct: 410 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTG 466
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ E+L+ M +K + + +++ F + G + EA + +EQM+ G +
Sbjct: 467 LCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 526
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++YNTL++ + E A LL + G D T++ +I L + ++ A
Sbjct: 527 LITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFH 586
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ +G YN I+ L K D AI+ F M + + TY +++ L
Sbjct: 587 IVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANED 646
Query: 357 RLPSASKLLLSCLKSGV 373
L LL GV
Sbjct: 647 FLKETRDLLRELCSRGV 663
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 138/295 (46%), Gaps = 36/295 (12%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR---------- 156
++ LC+ T +A R+ R ++ G ++ YN L+ G C+ G+L AR
Sbjct: 84 LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAP 143
Query: 157 ------WILKELGDSGHA----------------PNAITYTTIMKCCFRNRKYKLGLEIL 194
I++ L D G P+ +TYT +++ ++ + +E+L
Sbjct: 144 DAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVL 203
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
M+ KG T + Y +I + GR+ +A +++ ++ + G Q D VSY T++ C
Sbjct: 204 DEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAA 263
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
+ E L EM ++ ++ T +L+ C+ G ++ A LE M+ G +N
Sbjct: 264 KRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLC 323
Query: 315 NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
N +++ + K G++D A +M D+ +Y++++ LC+A+R A +LL
Sbjct: 324 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELL 378
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 7/250 (2%)
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A R+ G P++ LI+ LC+ GR A +L+ SG A + Y T++
Sbjct: 62 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 121
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
R + ++++M D + Y +I GR+ EA ++ M+ G Q
Sbjct: 122 GYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 178
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+V+Y L+ CK A +LDEM +G + T+ ++I+G+C+ G + AR L
Sbjct: 179 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 238
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
++ GF + +Y ++ L + + +F M K + T+ +V C+
Sbjct: 239 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG 298
Query: 356 KRLPSASKLL 365
+ A ++L
Sbjct: 299 GMVERAIQVL 308
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 108/230 (46%), Gaps = 7/230 (3%)
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
N ++ L L A ++ G AP+ T +++ R + +L A +R
Sbjct: 47 NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
G D F Y T++A + + G+L A + M V D +Y +I C G++
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A LLD+M +G + T+T+L++ +CK+ A L+ M G N+ YN I++
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223
Query: 320 RLGKDGKIDHA---INVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLL 365
+ ++G++D A +N S + D+ +Y++++ LC AKR +L
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELF 273
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 80/186 (43%), Gaps = 7/186 (3%)
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
L EA +++ + G D+ LI C+ G+ A +L E+ G D + +
Sbjct: 59 LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 340
L+ G C+ G + AR + M + D+ Y I+ L G++ A+++ + M +
Sbjct: 119 LVAGYCRYGQLDAARRLIASM-PVAPDA--YTYTPIIRGLCDRGRVGEALSLLDDMLHRG 175
Query: 341 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
TY+ ++ +CK+ A ++L G +++G+ G +A+
Sbjct: 176 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 235
Query: 398 KIQSKI 403
+ +++
Sbjct: 236 EFLNRL 241
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 188/376 (50%), Gaps = 4/376 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ A +L R+ + P+VV YN++I + L++ + DL EM+ G
Sbjct: 167 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 226
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV +Y++L+ LGK ++A +F MI ++ P TF+I+++G CK A
Sbjct: 227 ISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAK 286
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K G P++VTY L+ G C ++ A+ I + G N +Y ++
Sbjct: 287 NVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGF 346
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +K + + M K D Y ++I K G++ A +++M GV D
Sbjct: 347 CKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDK 406
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN++++ CK +++ A LL +M+ +G + D YT+TILIDGLCK G +K A+ E
Sbjct: 407 ITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFED 466
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G++ + Y ++ + D A+ + ME + ++ TY ++ +L +
Sbjct: 467 LLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDE 526
Query: 358 LPSASKLLLSCLKSGV 373
A KLL + G+
Sbjct: 527 NDMAEKLLREMIARGL 542
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 182/373 (48%), Gaps = 4/373 (1%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
NR+ +P + + ++ + + ++ L EM GI D+ ++N L++C Q
Sbjct: 44 FNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQ 103
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
LG + VF +++ P T ++ GLC AL + GF V
Sbjct: 104 LGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVC 163
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
Y LI GLCK G+ A +L+ + PN + Y TI+ + + ++ S M
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 223
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
KG + D Y +I+ F +G+L +A +M+++ + D+ +++ L++ +CKEG+++
Sbjct: 224 SKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVK 283
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A +L M KQG + D T+ L+DG C + A+ M + G +N+++YN ++
Sbjct: 284 EAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMI 343
Query: 319 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
+ K K+D A+N+F+ M K D TY+S++ LCK+ ++ A KL+ GV
Sbjct: 344 NGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVP 403
Query: 375 ILKSAQKAVVDGL 387
K +++D L
Sbjct: 404 HDKITYNSILDAL 416
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 194/408 (47%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ + Q +++ + + G P+ +T +LI G + +L D+++ +
Sbjct: 96 ILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVAL 155
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G + Y +L++ L ++G+ A ++ + + + P +N +++ +CK + + A
Sbjct: 156 GFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEA 215
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G P++VTY+ LI G C G+L A + ++ P+ T++ ++
Sbjct: 216 FDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDG 275
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + K +L+ M ++G D YC+++ + + ++ +A M GV +
Sbjct: 276 FCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTAN 335
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ SYN +IN +CK K++ A L EM + D T+ LIDGLCK+G I A ++
Sbjct: 336 VQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVD 395
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M+ G + YN I+D L K+ ++D AI + M+ D +TY+ ++ LCK
Sbjct: 396 EMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGG 455
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
RL A + L G I ++ G + +A + SK+
Sbjct: 456 RLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKME 503
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 134/272 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D +C+ +L M + GI PDVVTY SL+ G ++ + + + M +
Sbjct: 271 ILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQG 330
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ +V SYN +++ ++ K DEA +F++M C ++ P T+N +++GLCK+ A
Sbjct: 331 GVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYA 390
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L++ + G + +TYN ++ LCK ++ A +L ++ D G P+ TYT ++
Sbjct: 391 LKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDG 450
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + K I + KGY + Y +I F +A + +M +G +
Sbjct: 451 LCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPN 510
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
+Y +I ++ + + A LL EM +G
Sbjct: 511 AKTYEIIILSLFEKDENDMAEKLLREMIARGL 542
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 105/204 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ +C+ D + M I PDVVTYNSLI G ++ +S +L L+DEM +
Sbjct: 341 IMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDR 400
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+P D +YNS++ L + + D+A + M + P T+ I+++GLCK +A
Sbjct: 401 GVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDA 460
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F L G+ + TY ++I+G C A +L ++ D+G PNA TY I+
Sbjct: 461 QNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILS 520
Query: 181 CFRNRKYKLGLEILSAMKRKGYTF 204
F + + ++L M +G F
Sbjct: 521 LFEKDENDMAEKLLREMIARGLLF 544
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 191/411 (46%), Gaps = 4/411 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ A C+ + D L +M G+ P+ TYN+LI G + ++ + EM
Sbjct: 260 VVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS 319
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV ++N LM L + GK EA VF M P ++NIMLNG +
Sbjct: 320 ILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT 379
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + G P + T+N+LIK G L A I E+ D G PN +TYTT++
Sbjct: 380 DLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAAL 439
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R K +E + M +G D + Y +I F G L +A + + +++ +G+ LDI
Sbjct: 440 CRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 499
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V ++++IN CK G++ A + D G +++L+DG C G ++ A +
Sbjct: 500 VLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDA 559
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G + N Y +V+ K G+ID +++F M K + Y+ ++ L +A R
Sbjct: 560 MVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 619
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
A +SG+ + K V+ GL + C EA + ++R +
Sbjct: 620 TVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNV 670
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 199/411 (48%), Gaps = 6/411 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG-ATRNSLLSCSLDLLDEMLE 59
ML+ + C++ + + M G +PDV +YN ++ G AT+ L+ + DL D ML
Sbjct: 329 MLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT-DLFDLMLG 387
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
GI P + ++N L+ G D+A +F +M + P T+ ++ LC+ D+
Sbjct: 388 DGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDD 447
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+ F + G P+ Y+ LI+G C G L A+ ++ E+ ++G + + +++I+
Sbjct: 448 AMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIIN 507
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + I G Y ++ + +G++++A + MV+ G++
Sbjct: 508 NLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 567
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ V Y TL+N YCK G+++ L EM ++G + + I+IDGL +AG A++
Sbjct: 568 NDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKF 627
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE---SMEVK-DSFTYSSMVHNLCKA 355
M + G N Y+ ++ L K+ D AI +F+ +M VK D T ++M+ + +
Sbjct: 628 HEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQT 687
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
+R+ A L S +SG+ ++ L G EA+ + S ++ A
Sbjct: 688 RRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 738
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 179/392 (45%), Gaps = 7/392 (1%)
Query: 2 LIDAYCQFVSFDAGYTIL-NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L+ +C+ D IL +R E G PDV +Y+ L+ + DLL M E
Sbjct: 152 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 211
Query: 61 GI--PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G PDV +YN+++ F+ G ++A +F++M+ + P T++ +++ LCK R D
Sbjct: 212 GAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMD 271
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A R + G +P TYN LI G G+ + A + KE+ P+ +T+ +M
Sbjct: 272 KAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLM 331
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ K K ++ M KG D F Y ++ + G L + TD + M+ DG+
Sbjct: 332 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 391
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
I ++N LI Y G L+ A ++ +EM G + + T+T +I LC+ G + A
Sbjct: 392 PVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEK 451
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
M G + AY+C++ G + A + + D +SS+++NLCK
Sbjct: 452 FNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCK 511
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
R+ A + + G+ ++DG
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDG 543
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 149/324 (45%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C S +++ + G+ D+V ++S+I + + + ++ D + +G
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVG 529
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P Y+ LM +GK ++A RVF M+ + P + ++NG CK D L
Sbjct: 530 LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGL 589
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + + G P + YNI+I GL +AGR A+ E+ +SG A N TY+ +++
Sbjct: 590 SLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGL 649
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+NR + + + ++ D T+IA + R++EA D + G+ +
Sbjct: 650 FKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCV 709
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y+ +I KEG +E A + M+ G E D ++ L K I A +L
Sbjct: 710 VTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSK 769
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDG 325
+++ F +VD G
Sbjct: 770 IDERNFSLEHLTTMLLVDLFSSKG 793
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 177/407 (43%), Gaps = 5/407 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI AY D I N MR+ G+ P+V+TY ++IA R + +++ ++M++
Sbjct: 399 VLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQ 458
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD ++Y+ L+ G +A + +++ + F+ ++N LCK +A
Sbjct: 459 GVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDA 518
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F G P V Y++L+ G C G++ A + + +G PN + Y T++
Sbjct: 519 QNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNG 578
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + GL + M +KG Y +I + GR A +M G+ ++
Sbjct: 579 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMN 638
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y+ ++ K + A L E+ + D T +I G+ + ++ A+
Sbjct: 639 KCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFA 698
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+++ G + Y+ ++ L K+G ++ A ++F SM+ DS + +V L K
Sbjct: 699 SISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKN 758
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG-CRREAKKIQSK 402
+ A L + + +VD G CR + + +K
Sbjct: 759 EIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFLPAK 805
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 170/384 (44%), Gaps = 42/384 (10%)
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P +Y LM C + +P+ A F ++ L N +L G C+ + TD AL
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 166
Query: 122 R-MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH--APNAITYTTIM 178
+ + G VP++ +Y+IL+K LC G+ A +L+ + + G +P+ + Y T++
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVI 226
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
F+ ++ M ++G D Y +V+ A K + +A ++ QMV GV
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+ +YN LI Y G+ + A + EM +Q D T +L+ LCK G IK AR
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDV 346
Query: 299 LEYMNKIGFDSNLEAYN----------CIVD-------RLGKD----------------- 324
+ M G + ++ +YN C+VD LG
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYAN 406
Query: 325 -GKIDHAINVFESME---VKDS-FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
G +D A+ +F M VK + TY++++ LC+ ++ A + + GV K A
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 466
Query: 380 QKAVVDGLRHSGCRREAKKIQSKI 403
++ G G +AK++ S+I
Sbjct: 467 YHCLIQGFCTHGSLLKAKELISEI 490
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 168 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
+P + TY +M CC R + +L L FG
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAF-------------FG------------------- 135
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKL-EAAYLLLDEMEKQGFECDKYTHTILIDGL 286
Q++ G+++DI+ N L+ +C+ + EA +LL + G D ++++IL+ L
Sbjct: 136 ---QLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSL 192
Query: 287 CKAGNIKGARLHLEYMNKIGF--DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 340
C G A L M + G ++ AYN ++D K+G ++ A ++F+ M +
Sbjct: 193 CDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPP 252
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 400
D TYSS+VH LCKA+ + A L + GV ++ G +G +EA ++
Sbjct: 253 DFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVF 312
Query: 401 SKIRMAKI 408
++R I
Sbjct: 313 KEMRRQSI 320
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 194/406 (47%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ + + N M G+SPD TYN+L+ + RN+ + D+ +ML G
Sbjct: 261 VINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRG 320
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ S++SL+ + G D+A F+DM L P + I++NG C+N AL
Sbjct: 321 VSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEAL 380
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G ++V YN ++ GLCK L A + E+ + G P+ T+TT++
Sbjct: 381 EIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGH 440
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ L + M +K D Y +I F K +++A + +M++ + +
Sbjct: 441 CKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNH 500
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+SY L+N YC G + A+ L DEM ++G + T +I G C++G++ A L
Sbjct: 501 ISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGK 560
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G + YN +++ K +D A + ME K D TY+ +++ C+ R
Sbjct: 561 MISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGR 620
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ A +L ++ G+ +S +++G +EA + ++
Sbjct: 621 MQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEM 666
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 164/308 (53%), Gaps = 2/308 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ I ++M E G + DVV YN+++ G + LL+ + L DEM+E
Sbjct: 365 ILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVER 424
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD ++ +L+H + G +A +F M ++ P T+NI+++G CK + A
Sbjct: 425 GVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKA 484
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + P ++Y IL+ G C G + A + E+ G P +T T++K
Sbjct: 485 NELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKG 544
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R+ E L M +G D Y T+I FVK + +A + +M T G+Q D
Sbjct: 545 YCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPD 604
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
+V+YN ++N +C++G+++ A L+L +M ++G + D+ T+T LI+G N+K A R H
Sbjct: 605 VVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHD 664
Query: 300 EYMNKIGF 307
E + + GF
Sbjct: 665 EMLQR-GF 671
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 189/378 (50%), Gaps = 6/378 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++A C+ D L M + GI D+VTYN+LI R LL + ++++ M
Sbjct: 190 IMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGK 249
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P +++YN++++ L + G+ A VF +M+ L+P T T+N +L C+N A
Sbjct: 250 GLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEA 309
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G P+L++++ LI + G L A +++ SG P+ + YT ++
Sbjct: 310 KDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILING 369
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
RN LEI M +G D Y T++ K L +A ++MV GV D
Sbjct: 370 YCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPD 429
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
++ TLI+ +CKEG + A L M ++ + D T+ ILIDG CK ++ A L
Sbjct: 430 FCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWN 489
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDSF-TYSSMVHNLCKA 355
E +++ F +++ +Y +V+ G + A +++ M +K + T ++++ C++
Sbjct: 490 EMISRKIFPNHI-SYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRS 548
Query: 356 KRLPSASKLLLSCLKSGV 373
L A + L + GV
Sbjct: 549 GDLSKADEFLGKMISEGV 566
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 182/395 (46%), Gaps = 4/395 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D + + N + +GI +V T N ++ ++ + L +M + GI D+ +YN+L
Sbjct: 167 DLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTL 226
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
++ + G EA V M L P T+N ++NGLCK A +F + G
Sbjct: 227 INAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGL 286
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P+ TYN L+ C+ A+ I ++ G +P+ I++++++ RN L
Sbjct: 287 SPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALM 346
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
MK G D Y +I + + G + EA + ++M+ G LD+V+YNT++N C
Sbjct: 347 YFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLC 406
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K+ L A L DEM ++G D T T LI G CK GN+ A M + ++
Sbjct: 407 KKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIV 466
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSC 368
YN ++D K +++ A ++ M + F +Y+ +V+ C + A +L
Sbjct: 467 TYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEM 526
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++ G++ V+ G SG +A + K+
Sbjct: 527 IRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKM 561
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 169/368 (45%), Gaps = 4/368 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +Y Q + G +R G + NSL+ G + + + ++ +E+
Sbjct: 120 LLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARS 179
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI +V++ N +++ L + K D+ DM + T+N ++N C+ A
Sbjct: 180 GIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEA 239
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P L TYN +I GLCK GR A+ + E+ G +P+ TY T++
Sbjct: 240 FEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVE 299
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
RN + +I S M +G + D + ++I + G L +A Y M T G+ D
Sbjct: 300 SCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPD 359
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V Y LIN YC+ G + A + D+M +QG D + +++GLCK + A +
Sbjct: 360 NVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFD 419
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + G + + ++ K+G + A+++F M K D TY+ ++ CK
Sbjct: 420 EMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTT 479
Query: 357 RLPSASKL 364
+ A++L
Sbjct: 480 EMEKANEL 487
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 102/205 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID +C+ + + N M I P+ ++Y L+ G +S + L DEM+
Sbjct: 470 ILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRK 529
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P + + N+++ + G +A+ MI + P + T+N ++NG K Y D A
Sbjct: 530 GIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKA 589
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++ G P++VTYN+++ G C+ GR++ A IL+++ + G P+ TYTT++
Sbjct: 590 FFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLING 649
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFD 205
K M ++G+ D
Sbjct: 650 YVSQDNLKEAFRFHDEMLQRGFVPD 674
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 199/412 (48%), Gaps = 11/412 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ + D +L +M EAG P+ +TYNSLI G + + + + S+ + +M
Sbjct: 209 LIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSC 268
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P V + NS +H LF+ G+ +EA +F M+ P +++ ML+G TD+
Sbjct: 269 GVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT--ATDSC 326
Query: 121 L----RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
L +F + G P +NILI + G + A I +++ + G P+ +T+ T
Sbjct: 327 LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFAT 386
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ R + L + M G Y +I G L +A + + +M+
Sbjct: 387 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 446
Query: 237 VQLDIVSY-NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
+ V Y +++IN CKEG++ ++D M + G + T L++G C GN++ A
Sbjct: 447 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 506
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 351
L+ M IG + N Y +VD K+G+ID A+ VF M K S YS ++H
Sbjct: 507 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 566
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L +A+R +A K+ ++SG + V+ GL + C EA + K+
Sbjct: 567 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 618
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 181/381 (47%), Gaps = 8/381 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID Y + D G I+ R+ + G+ PD +Y SLI G ++ + + L EM+E
Sbjct: 105 ILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQ 163
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P + NS++ L ++ + D+A + Q M+ + P T++++++GLCK++ D A
Sbjct: 164 GVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA 223
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+ + + G P +TYN LI G +G + + K++ G P + +
Sbjct: 224 ERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHA 283
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR--LKEATDYMEQMVTDGVQ 238
F++ + I +M KG D Y T++ + L + + M+T G+
Sbjct: 284 LFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIA 343
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+ +N LIN Y + G ++ A L+ ++M+ +G D T +I LC+ G + A
Sbjct: 344 PNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 403
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHNLC 353
+M IG + Y C++ G++ A + M KD +SS+++NLC
Sbjct: 404 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 463
Query: 354 KAKRLPSASKLLLSCLKSGVR 374
K R+ ++ +++G R
Sbjct: 464 KEGRVAEGKDIMDMMVQTGQR 484
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 163/370 (44%), Gaps = 5/370 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+AY + D I M+ G+ PD VT+ ++I+ R L +L + M+++
Sbjct: 351 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 410
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT-FNIMLNGLCKNRYTDN 119
G+PP Y L+ G+ +A + +M+ D+ P F+ ++N LCK
Sbjct: 411 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAE 470
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+ + + G P +VT+N L++G C G + A +L + G PN Y T++
Sbjct: 471 GKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 530
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+N + L + M KG Y ++ + R A +M+ G +
Sbjct: 531 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTV 590
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
I +Y ++ C+ + A +LL+++ + D T I+I + K G + A+
Sbjct: 591 SIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 650
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
+ ++ G N++ Y+ ++ L K+ + A N+F S+E DS + +V L
Sbjct: 651 DAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNK 710
Query: 356 KRLPSASKLL 365
+ AS L
Sbjct: 711 AEVAKASNYL 720
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 167/347 (48%), Gaps = 7/347 (2%)
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
PP + +YN L+ C ++ +PD + ++ L P +++++ G K+ D A
Sbjct: 97 PPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIY-GFVKDGEVDKAHC 155
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+F + + G +P+++ N +IK LCK + A I++++ DSG AP+ TY+ I+
Sbjct: 156 LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 215
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+++ +L M G + Y ++I + G E+ +QM + GV +
Sbjct: 216 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 275
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH--LE 300
+ N+ I+ K G+ A + D M +G + D +++ ++ G A + A +H
Sbjct: 276 NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFN 335
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M G N +N +++ + G +D A+ +FE M+ + D+ T+++++ +LC+
Sbjct: 336 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 395
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
RL A + GV ++ ++ G + G +AK++ S++
Sbjct: 396 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 442
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 129/260 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ YC + + + +L+ M GI P+ Y +L+ G +N + +L + +ML G
Sbjct: 493 LMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG 552
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P Y+ ++H LFQ + A ++F +MI T T+ ++L GLC+N TD A
Sbjct: 553 VKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEAN 612
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L +++T+NI+I + K GR + A+ + + G PN TY+ ++
Sbjct: 613 MLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNL 672
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ Y+ + ++++ G+ D ++ + + +A++Y+ + + + L+
Sbjct: 673 IKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEA 732
Query: 242 VSYNTLINLYCKEGKLEAAY 261
+ + L +L+ +EG ++ +
Sbjct: 733 STISLLASLFSREGMIKGLF 752
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 11/227 (4%)
Query: 153 RTARWILKELGDSGHAPNAI-TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
R RW H+P I TY ++ C R + LGL I+ + + G D F Y +
Sbjct: 86 RMDRWACPR-----HSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-S 139
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+I FVK G + +A +M+ GV I+ N++I CK +++ A ++ +M G
Sbjct: 140 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 199
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
D +T++++IDGLCK+ + A LE M + G N YN ++ G + ++
Sbjct: 200 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 259
Query: 332 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
VF+ M + +S +H L K R A + S + G +
Sbjct: 260 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPK 306
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 188/400 (47%), Gaps = 4/400 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ I+ +C+ +L +M + G PD+VT +SL+ G + +S ++ L+D+M+EM
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD +++ +L+H LF K EA + M+ P T+ ++NGLCK D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + ++ +V +N +I LCK + A + E+ G PN +TY +++ C
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ +LS M K + + +I AF K G+L EA E+M+ + D
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++YN LIN +C +L+ A + M + + T+ LI+G CK ++
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M++ G N Y I+ + G D A VF+ M D TYS ++H LC
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+L +A + KS + + +++G+ +G EA
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA 522
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 184/364 (50%), Gaps = 4/364 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + F+ ++ +M+ GIS D+ TY+ I R S LS +L +L +M+++G
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ + +SL++ + +A + M+ P T TF +++GL + A+
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P+LVTY ++ GLCK G + A +L ++ + N + + TI+
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL 268
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R ++ +++ + M+ KG + Y ++I GR +A+ + M+ + ++
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++N LI+ + KEGKL A L +EM ++ + D T+ +LI+G C + A+ ++
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M N++ YN +++ K +++ + +F M V ++ TY++++ +A
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 358 LPSA 361
SA
Sbjct: 449 CDSA 452
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 165/329 (50%), Gaps = 4/329 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C + + +L+ M E I+P+VVT+N+LI + L + L +EM++
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD +YN L++ + DEA ++F+ M+ D P T+N ++NG CK + ++ +
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGV 418
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + + G V VTY +I+G +AG +A+ + K++ + + +TY+ ++
Sbjct: 419 ELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL 478
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K L I +++ + F Y T+I K G++ EA D + ++ D+
Sbjct: 479 CSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDV 535
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNT+I+ C + L+ A L +M++ G + T+ LI + + + ++
Sbjct: 536 VTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKE 595
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
M GF + + + + L DG++D +
Sbjct: 596 MRSSGFVGDASTISLVTNML-HDGRLDKS 623
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 178/387 (45%), Gaps = 6/387 (1%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
+ D + M ++ P +V +N L++ + + + L ++M +GI D+++Y
Sbjct: 62 IKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTY 121
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
+ ++C + + A V M+ P T + +LNG C ++ +A+ + + +
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G+ P+ T+ LI GL + A ++ ++ G P+ +TY T++ + L
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
L +L+ M+ + + T+I + K ++ A D +M T G++ ++V+YN+LIN
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHLEYMNKIGFD 308
C G+ A LL M ++ + T LID K G ++ +LH E + + D
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR-SID 360
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKL 364
+ YN +++ ++D A +F+ M KD TY+++++ CK KR+ +L
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ G+ ++ G +G
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGFFQAG 447
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 147/302 (48%), Gaps = 4/302 (1%)
Query: 106 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
I+ N L D+A+ +F + K P +V +N L+ + K + + +++
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
G + + TY+ + C R + L L +L+ M + GY D +++ + R+ +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
++QMV G + D ++ TLI+ K A L+D+M ++G + D T+ +++G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 341
LCK G+I A L M +N+ +N I+D L K ++ A+++F ME K +
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
TY+S+++ LC R AS+LL + L+ + A++D G EA+K+
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352
Query: 402 KI 403
++
Sbjct: 353 EM 354
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 119/245 (48%), Gaps = 4/245 (1%)
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
P+ + + ++ + K++L + + M+ G + D + Y I F + +L A
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+ +M+ G + DIV+ ++L+N YC ++ A L+D+M + G++ D +T T LI GL
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 344
A ++ M + G +L Y +V+ L K G ID A+N+ ME +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+++++ +LCK + + A L G+R ++++ L + G +A ++ S +
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 405 MAKIS 409
KI+
Sbjct: 321 EKKIN 325
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 4/194 (2%)
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
I ++ +A D MV IV +N L++ K K E L ++M+ G D YT
Sbjct: 61 IIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
++I I+ C+ + A L M K+G++ ++ + +++ +I A+ + + M
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 339 V----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
D+FT+++++H L + A L+ ++ G + VV+GL G
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 395 EAKKIQSKIRMAKI 408
A + +K+ A+I
Sbjct: 241 LALNLLNKMEAARI 254
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 77/195 (39%), Gaps = 38/195 (19%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C + D I ++++ + ++ YN++I G + + + DL +
Sbjct: 473 ILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLF---CSL 529
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PDV +YN++ ++GLC R A
Sbjct: 530 SIKPDVVTYNTM-----------------------------------ISGLCSKRLLQEA 554
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+FR +++ G +P TYN LI+ + + ++KE+ SG +A T + +
Sbjct: 555 DDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNM 614
Query: 181 CFRNRKYKLGLEILS 195
R K L +LS
Sbjct: 615 LHDGRLDKSFLNMLS 629
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 189/389 (48%), Gaps = 39/389 (10%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L +G + DV YN+L+AG R L + L+ M + PD ++Y ++ L
Sbjct: 131 VLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLI---ASMPVAPDAYTYTPIIRGLC 187
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
G+ EA + DM+ P T+ ++L +CK+ A+ + ++ G P +V
Sbjct: 188 DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIV 247
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN++I G+C+ GR+ AR L L G P+ ++YTT++K ++++ E+ + M
Sbjct: 248 TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 307
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K + + ++ F + G ++ A +EQM G + N +IN CK+G++
Sbjct: 308 MEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRV 367
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKA---------------------------- 289
+ A+ L+ M G D ++T ++ GLC+A
Sbjct: 368 DDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTF 427
Query: 290 -------GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-D 341
G I+ A + +E M++ G + N+ YN +V+ G++D A+ +F SM K +
Sbjct: 428 ICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPN 487
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
+ TY++++ LC A+RL +A++LL L+
Sbjct: 488 TITYTTLLTGLCNAERLDAAAELLAEMLQ 516
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 189/377 (50%), Gaps = 7/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++A C+ F +L+ MR G +P++VTYN +I G R + + + L+ +
Sbjct: 216 VLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSY 275
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD SY +++ L + ++ +F +M+ + P TF++++ C+ + A
Sbjct: 276 GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERA 335
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + HG NI+I +CK GR+ A L +G G +P+ I+YTT++K
Sbjct: 336 IQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKG 395
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R +++ E+L M RK + + T I + G +++AT +EQM G +++
Sbjct: 396 LCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVN 455
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+YN L+N +C +G++++A L M + + T+T L+ GLC A + A L
Sbjct: 456 IVTYNALVNGFCVQGRVDSALELFYSMPCKP---NTITYTTLLTGLCNAERLDAAAELLA 512
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + N+ +N +V + G +D AI + E M + TY++++ + K
Sbjct: 513 EMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDC 572
Query: 357 RLPSASKLLLSCLKSGV 373
A +LL + +GV
Sbjct: 573 NSEEALELLHGLVSNGV 589
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 151/324 (46%), Gaps = 3/324 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ D + LN M G SPD ++Y +++ G R + +LL EM+
Sbjct: 356 IVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK 415
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PP+ ++N+ + L Q G ++A + + M T+N ++NG C D+A
Sbjct: 416 NCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSA 475
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F + P +TY L+ GLC A RL A +L E+ APN +T+ ++
Sbjct: 476 LELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSF 532
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ +E++ M G T + Y T++ K +EA + + +V++GV D
Sbjct: 533 FCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPD 592
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+Y+++I + +E ++E A + ++ G + ++ LCK N GA
Sbjct: 593 IVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFA 652
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKD 324
YM G N Y +++ L +
Sbjct: 653 YMVSNGCMPNELTYITLIEGLANE 676
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 166/377 (44%), Gaps = 7/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
ML+ +C+ + +L +M G + + N +I + + + L+ M
Sbjct: 321 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 380
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD SY +++ L + + ++A + ++M+ + P TFN + LC+ + A
Sbjct: 381 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 440
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + +HG +VTYN L+ G C GR+ +A + + PN ITYTT++
Sbjct: 441 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTG 497
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ E+L+ M +K + + +++ F + G + EA + +EQM+ G +
Sbjct: 498 LCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 557
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++YNTL++ K+ E A LL + G D T++ +I L + ++ A
Sbjct: 558 LITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFH 617
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ +G YN I+ L K D AI+ F M + + TY +++ L
Sbjct: 618 IVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANED 677
Query: 357 RLPSASKLLLSCLKSGV 373
L LL GV
Sbjct: 678 FLKETRDLLRELCSRGV 694
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 138/295 (46%), Gaps = 36/295 (12%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR---------- 156
++ LC+ T +A R+ R ++ G ++ YN L+ G C+ G+L AR
Sbjct: 115 LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAP 174
Query: 157 ------WILKELGDSGHA----------------PNAITYTTIMKCCFRNRKYKLGLEIL 194
I++ L D G P+ +TYT +++ ++ + +E+L
Sbjct: 175 DAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVL 234
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
M+ KG T + Y +I + GR+ +A +++ ++ + G Q D VSY T++ C
Sbjct: 235 DEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAA 294
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
+ E L EM ++ ++ T +L+ C+ G ++ A LE M+ G +N
Sbjct: 295 KRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLC 354
Query: 315 NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
N +++ + K G++D A +M D+ +Y++++ LC+A+R A +LL
Sbjct: 355 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELL 409
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 111/253 (43%), Gaps = 7/253 (2%)
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
+ A R+ G P++ LI+ LC+ GR A +L+ SG A + Y T
Sbjct: 90 SPRAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 149
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ R + ++++M D + Y +I GR+ EA ++ M+ G
Sbjct: 150 LVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 206
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
Q +V+Y L+ CK A +LDEM +G + T+ ++I+G+C+ G + AR
Sbjct: 207 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 266
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
L ++ GF + +Y ++ L + + +F M K + T+ +V
Sbjct: 267 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 326
Query: 353 CKAKRLPSASKLL 365
C+ + A ++L
Sbjct: 327 CRGGMVERAIQVL 339
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 78/183 (42%), Gaps = 7/183 (3%)
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A +++ + G D+ LI C+ G+ A +L E+ G D + + L+
Sbjct: 93 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 340
G C+ G + AR + M + D+ Y I+ L G++ A+++ + M +
Sbjct: 153 GYCRYGQLDAARRLIASM-PVAPDAY--TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 400
TY+ ++ +CK+ A ++L G +++G+ G +A++
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269
Query: 401 SKI 403
+++
Sbjct: 270 NRL 272
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 189/389 (48%), Gaps = 39/389 (10%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L +G + DV YN+L+AG R L + L+ M + PD ++Y ++ L
Sbjct: 100 VLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLI---ASMPVAPDAYTYTPIIRGLC 156
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
G+ EA + DM+ P T+ ++L +CK+ A+ + ++ G P +V
Sbjct: 157 DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIV 216
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN++I G+C+ GR+ AR L L G P+ ++YTT++K ++++ E+ + M
Sbjct: 217 TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 276
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K + + ++ F + G ++ A +EQM G + N +IN CK+G++
Sbjct: 277 MEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRV 336
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKA---------------------------- 289
+ A+ L+ M G D ++T ++ GLC+A
Sbjct: 337 DDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTF 396
Query: 290 -------GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-D 341
G I+ A + +E M++ G + N+ YN +V+ G++D A+ +F SM K +
Sbjct: 397 ICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPN 456
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
+ TY++++ LC A+RL +A++LL L+
Sbjct: 457 TITYTTLLTGLCNAERLDAAAELLAEMLQ 485
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 189/377 (50%), Gaps = 7/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++A C+ F +L+ MR G +P++VTYN +I G R + + + L+ +
Sbjct: 185 VLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSY 244
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD SY +++ L + ++ +F +M+ + P TF++++ C+ + A
Sbjct: 245 GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERA 304
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + HG NI+I +CK GR+ A L +G G +P+ I+YTT++K
Sbjct: 305 IQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKG 364
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R +++ E+L M RK + + T I + G +++AT +EQM G +++
Sbjct: 365 LCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVN 424
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+YN L+N +C +G++++A L M + + T+T L+ GLC A + A L
Sbjct: 425 IVTYNALVNGFCVQGRVDSALELFYSMPCKP---NTITYTTLLTGLCNAERLDAAAELLA 481
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + N+ +N +V + G +D AI + E M + TY++++ + K
Sbjct: 482 EMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDC 541
Query: 357 RLPSASKLLLSCLKSGV 373
A +LL + +GV
Sbjct: 542 NSEEALELLHGLVSNGV 558
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 151/324 (46%), Gaps = 3/324 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ D + LN M G SPD ++Y +++ G R + +LL EM+
Sbjct: 325 IVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK 384
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PP+ ++N+ + L Q G ++A + + M T+N ++NG C D+A
Sbjct: 385 NCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSA 444
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F + P +TY L+ GLC A RL A +L E+ APN +T+ ++
Sbjct: 445 LELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSF 501
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ +E++ M G T + Y T++ K +EA + + +V++GV D
Sbjct: 502 FCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPD 561
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+Y+++I + +E ++E A + ++ G + ++ LCK N GA
Sbjct: 562 IVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFA 621
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKD 324
YM G N Y +++ L +
Sbjct: 622 YMVSNGCMPNELTYITLIEGLANE 645
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 166/377 (44%), Gaps = 7/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
ML+ +C+ + +L +M G + + N +I + + + L+ M
Sbjct: 290 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 349
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD SY +++ L + + ++A + ++M+ + P TFN + LC+ + A
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 409
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + +HG +VTYN L+ G C GR+ +A + + PN ITYTT++
Sbjct: 410 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTG 466
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ E+L+ M +K + + +++ F + G + EA + +EQM+ G +
Sbjct: 467 LCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 526
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++YNTL++ K+ E A LL + G D T++ +I L + ++ A
Sbjct: 527 LITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFH 586
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ +G YN I+ L K D AI+ F M + + TY +++ L
Sbjct: 587 IVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANED 646
Query: 357 RLPSASKLLLSCLKSGV 373
L LL GV
Sbjct: 647 FLKETRDLLRELCSRGV 663
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 138/295 (46%), Gaps = 36/295 (12%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR---------- 156
++ LC+ T +A R+ R ++ G ++ YN L+ G C+ G+L AR
Sbjct: 84 LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAP 143
Query: 157 ------WILKELGDSGHA----------------PNAITYTTIMKCCFRNRKYKLGLEIL 194
I++ L D G P+ +TYT +++ ++ + +E+L
Sbjct: 144 DAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVL 203
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
M+ KG T + Y +I + GR+ +A +++ ++ + G Q D VSY T++ C
Sbjct: 204 DEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAA 263
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
+ E L EM ++ ++ T +L+ C+ G ++ A LE M+ G +N
Sbjct: 264 KRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLC 323
Query: 315 NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
N +++ + K G++D A +M D+ +Y++++ LC+A+R A +LL
Sbjct: 324 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELL 378
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 7/250 (2%)
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A R+ G P++ LI+ LC+ GR A +L+ SG A + Y T++
Sbjct: 62 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 121
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
R + ++++M D + Y +I GR+ EA ++ M+ G Q
Sbjct: 122 GYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 178
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+V+Y L+ CK A +LDEM +G + T+ ++I+G+C+ G + AR L
Sbjct: 179 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 238
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
++ GF + +Y ++ L + + +F M K + T+ +V C+
Sbjct: 239 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG 298
Query: 356 KRLPSASKLL 365
+ A ++L
Sbjct: 299 GMVERAIQVL 308
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 108/230 (46%), Gaps = 7/230 (3%)
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
N ++ L L A ++ G AP+ T +++ R + +L A +R
Sbjct: 47 NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
G D F Y T++A + + G+L A + M V D +Y +I C G++
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A LLD+M +G + T+T+L++ +CK+ A L+ M G N+ YN I++
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223
Query: 320 RLGKDGKIDHA---INVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLL 365
+ ++G++D A +N S + D+ +Y++++ LC AKR +L
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELF 273
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 80/186 (43%), Gaps = 7/186 (3%)
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
L EA +++ + G D+ LI C+ G+ A +L E+ G D + +
Sbjct: 59 LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 340
L+ G C+ G + AR + M + D+ Y I+ L G++ A+++ + M +
Sbjct: 119 LVAGYCRYGQLDAARRLIASM-PVAPDAY--TYTPIIRGLCDRGRVGEALSLLDDMLHRG 175
Query: 341 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
TY+ ++ +CK+ A ++L G +++G+ G +A+
Sbjct: 176 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 235
Query: 398 KIQSKI 403
+ +++
Sbjct: 236 EFLNRL 241
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 192/389 (49%), Gaps = 44/389 (11%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
++ ++ G +P + TYN+L+ G + L ++DLL ++++ G PDV +Y SL+ L
Sbjct: 281 LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLG 340
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ + EA ++F++M L T + ++ GL + A +++ + HG VP++V
Sbjct: 341 KEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVV 400
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T + +I GL KAGR+ A I K + G APN + Y+ ++ + RK LE+L+ M
Sbjct: 401 TLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 460
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K+ +CT D ++YN LI+ CK G +
Sbjct: 461 KK--------AFCTP---------------------------DTITYNILIDGLCKSGDV 485
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
EAA DEM + G + D YT+ ILI GLCKAGN A L+ M+ F Y+ +
Sbjct: 486 EAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRF-----VYSSL 540
Query: 318 VDRLGKDGKIDHAINVFESME---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
VD L K GK++ +F ME V +S T + ++ +LCKA R+ A L + K G+
Sbjct: 541 VDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMP 600
Query: 375 ILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A +++ L SG E + + ++
Sbjct: 601 -HPYAYNSIISALIKSGKVNEGQAVYQEM 628
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 194/409 (47%), Gaps = 38/409 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREA-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
+LI YC + + ++ M E G++P + T+N ++ G ++ + ++D E +
Sbjct: 159 VLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHF-EAVR 217
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+P +++ L++ L + G +A+ + Q+ T T+ ++N L KN+
Sbjct: 218 RSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQE 277
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+ + + +G P + TYN L+ GLCK GRL A +L+++ D+G P+ +TYT+++
Sbjct: 278 AVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLID 337
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ ++ ++ M +G D Y +I ++ G++ +A+ + M + G
Sbjct: 338 GLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVP 397
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF--------------------EC----- 274
D+V+ +T+I+ K G++ AA + ME +G +C
Sbjct: 398 DVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML 457
Query: 275 ----------DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
D T+ ILIDGLCK+G+++ AR + M + G ++ YN ++ L K
Sbjct: 458 AQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKA 517
Query: 325 GKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
G D A V + M F YSS+V LCK+ +L L +SGV
Sbjct: 518 GNTDAACGVLDDMS-SSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGV 565
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 187/373 (50%), Gaps = 10/373 (2%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPD 83
G V T N+L+ R + +LL L PDV ++N L+ +CL + +P+
Sbjct: 114 GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAR--EPE 171
Query: 84 EANRVFQDMICG-DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
EA V ++M + P T N++L+GLCK+ A+ F +++ V T++IL
Sbjct: 172 EAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPV-SAATFSIL 230
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
I GL KAG + A + +E +G + TYT I+ +N+K + + ++ + G
Sbjct: 231 INGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGC 290
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
T Y ++ K+GRL+EA D + ++V +G D+V+Y +LI+ KE + AY
Sbjct: 291 TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYK 350
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
L EM +G D +T LI GL + G I A + M G ++ + ++D L
Sbjct: 351 LFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLS 410
Query: 323 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
K G+I A+ +F+SME + + YS+++H LCKA+++ A ++L K+
Sbjct: 411 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 470
Query: 379 AQKAVVDGLRHSG 391
++DGL SG
Sbjct: 471 TYNILIDGLCKSG 483
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 134/271 (49%), Gaps = 8/271 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID + A I M G++P+ V Y++LI G + + C+L++L +M +
Sbjct: 405 MIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 464
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +YN L+ L + G + A F +M+ P T+NI+++GLCK TD A
Sbjct: 465 CTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAAC 524
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + FV Y+ L+ GLCK+G+L + E+ SG A + I C
Sbjct: 525 GVLDDMSSSRFV-----YSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLC 579
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
NR + + + +A++++G + Y ++I+A +K G++ E ++M T + D
Sbjct: 580 KANRVDE-AVSLFNAIRKEGMPHP-YAYNSIISALIKSGKVNEGQAVYQEM-TRWWKPDR 636
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
V+YN L+N +++ A+ EM +G+
Sbjct: 637 VTYNALLNGMIGANRMDRAHYYYLEMTGRGY 667
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 93/193 (48%), Gaps = 6/193 (3%)
Query: 216 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ-GFEC 274
F + R +EA + ++ + + D+ ++N LI YC + E A+ ++ EME+ G
Sbjct: 129 FARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAP 188
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
TH +++ GLCK+G + A H E + + + ++ +++ L K G + A ++
Sbjct: 189 SLKTHNLVLHGLCKSGKVLAAMDHFEAVRR-SMPVSAATFSILINGLVKAGMMIQAHSLA 247
Query: 335 ESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
+ D TY+++V+ L K K++ A L+ +G + A+++GL
Sbjct: 248 QETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKM 307
Query: 391 GCRREAKKIQSKI 403
G EA + KI
Sbjct: 308 GRLEEAIDLLRKI 320
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+ + G + + M +G++ + T LI + + + ++ L + + + G
Sbjct: 540 LVDGLCKSGKLEGGCMLFHEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG 598
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+P ++YNS++ L + GK +E V+Q+M P T+N +LNG+ D A
Sbjct: 599 MP-HPYAYNSIISALIKSGKVNEGQAVYQEMTRW-WKPDRVTYNALLNGMIGANRMDRAH 656
Query: 122 RMFRGLQKHGFVPEL 136
+ + G+VP +
Sbjct: 657 YYYLEMTGRGYVPPV 671
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 205/447 (45%), Gaps = 39/447 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ + I + M GISP+ VT NSLI G +++ + + LL+EML G
Sbjct: 308 LIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGG 367
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ ++ S++H L + D A +M+ + P ++++GLC+N A+
Sbjct: 368 GVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAI 427
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ L + GF VT N LI GLC+AG A +LKE+ + G ++I+Y T++ C
Sbjct: 428 ELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILAC 487
Query: 182 FRNRKYKLGLEILSAMKRKG-----YTF------------------------------DG 206
+ K + G ++ M R+G YT+ D
Sbjct: 488 CKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDA 547
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ Y +I + K R++E ++MVT ++ + V Y TLI YC+ G + A+ L D+
Sbjct: 548 YTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDD 607
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M +G T++ LI GL G + A L+ M K G N+ Y ++ K G+
Sbjct: 608 MRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQ 667
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+ ++ + M + + TY+ M++ CK + +A+KLL + G+ A
Sbjct: 668 MHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNA 727
Query: 383 VVDGLRHSGCRREAKKIQSKIRMAKIS 409
+ +G G EA K+ + IS
Sbjct: 728 LTNGFCKEGKMEEALKVCDLMSTGGIS 754
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 173/353 (49%), Gaps = 4/353 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ CQ + R+ E G + + VT N+LI G + LL EMLE
Sbjct: 412 LLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLER 471
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ D SYN+L+ + GK +E ++ ++M+ + P T+N++L+GLC + A
Sbjct: 472 GLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEA 531
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ +K+G P+ TY I+I G CKA R+ + +E+ NA+ Y T+++
Sbjct: 532 GGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRA 591
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
N + + M+ +G Y ++I IG + A +++M +G+ +
Sbjct: 592 YCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPN 651
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V Y LI YCK G++ +L EM +K T+TI+I+G CK GN+K A L
Sbjct: 652 VVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLN 711
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 349
M + G + YN + + K+GK++ A+ V + M D TY++++
Sbjct: 712 EMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLI 764
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 208/452 (46%), Gaps = 42/452 (9%)
Query: 1 MLIDAY-CQF--VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 57
+LI Y QF + F + + + + G+ P + T N L++ + + + S + D M
Sbjct: 129 LLIHVYSTQFKHLGFGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIM 188
Query: 58 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
G+ PDV+ ++++++ G+ D+A +F+ M + P T+N +++GLCKN
Sbjct: 189 CHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRL 248
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
D A + ++K P LVTY +LI GL K R A ILKE+ D G+APN + Y T+
Sbjct: 249 DEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTL 308
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ R L+I M G + + ++I + K +++ A +E+M+T G
Sbjct: 309 IDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGG 368
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEM------------------------------ 267
++ ++ ++I+ C + + ++A L + EM
Sbjct: 369 VINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIE 428
Query: 268 -----EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
++GF + T LI GLC+AG+ + A L+ M + G + +YN ++
Sbjct: 429 LWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACC 488
Query: 323 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
K+GK++ + E M + D +TY+ ++H LC ++ A L C K+G
Sbjct: 489 KEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAY 548
Query: 379 AQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
++DG + E +K+ ++ KI
Sbjct: 549 TYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQ 580
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 128/289 (44%), Gaps = 35/289 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
ML+ C + + + ++ G PD TY +I G + + + L EM+ M
Sbjct: 517 MLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTM 576
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I + Y +L+ + G EA R+ DM + +AT++ +++GL D+A
Sbjct: 577 KIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSA 636
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ ++K G P +V Y LI G CK G++ IL+E+ + PN ITYT ++
Sbjct: 637 NQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMIN- 695
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
G+C K+G +K A + +M G+ D
Sbjct: 696 ---------------------------GHC-------KLGNMKAAAKLLNEMAQKGIVPD 721
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
V+YN L N +CKEGK+E A + D M G D T+T LIDG K
Sbjct: 722 AVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHKP 770
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 205/393 (52%), Gaps = 7/393 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ + C D T+ + +R G++PD +TY++L++G +N+ L +L LLDEM
Sbjct: 164 IMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSY 223
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD-LTPCTATFNIMLNGLCKNRYTDN 119
+ PD YN+L+ F+ G+ ++A RV++ ++ +P AT+N+ML+GLCK
Sbjct: 224 EVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKE 283
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A ++ + + P+++TY +I GLC++ + +A + E+ +G P+ + Y +++K
Sbjct: 284 AGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLK 343
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT-DGVQ 238
+ + +M G + Y ++ G + +ATD E + D +
Sbjct: 344 GFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLS 402
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D+V+++T+I+ C++G + +L+E G E D+++++ +I GLCK G + A
Sbjct: 403 PDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKL 462
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCK 354
E ++ F N YN +++ + K AI V+ M D + TY++++H LCK
Sbjct: 463 YEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCK 522
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
A++ AS+ L+ G + + +++ GL
Sbjct: 523 AEKYLEASRFTREMLEKGCMLDVNTYGSLIRGL 555
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 208/449 (46%), Gaps = 53/449 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-EM 60
L+ + + D +L+ M + PD V YN+L+ G RN ++ + ++++ +
Sbjct: 200 LMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDP 259
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P++ +YN ++ L +LG EA V++ M+ + P T+ M++GLC++ D+A
Sbjct: 260 GASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSA 319
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR--W----------------ILKEL 162
R++ + K G VP++V YN L+KG C AGR+ A W +LK L
Sbjct: 320 ARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGL 379
Query: 163 GDSGH-----------------APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
D G +P+ +T++T++ L+IL + G D
Sbjct: 380 FDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELD 439
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
F Y ++I+ K GRL +A E++ D + + YN LIN +C+ K A +
Sbjct: 440 EFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYS 499
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+M + T+ LI GLCKA ++ +R E + K G ++ Y ++ L +D
Sbjct: 500 QMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEK-GCMLDVNTYGSLIRGLCRD 558
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL------SCLKSGVR 374
KID A+ ++ + K D ++ ++H LC A ++ AS+LL +C + V
Sbjct: 559 KKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVV- 617
Query: 375 ILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++DG +GC +A + I
Sbjct: 618 ----TYNTLMDGFYETGCFDKAASLWMAI 642
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 185/378 (48%), Gaps = 7/378 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C+ D+ + + M + G+ PDVV YNSL+ G + + D M G
Sbjct: 306 MIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSG 365
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD-LTPCTATFNIMLNGLCKNRYTDNA 120
I +V SYN ++ LF G D+A +++ + D L+P TF+ M++GLC+ + + +
Sbjct: 366 IR-NVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKS 424
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L++ + G + +Y+ +I GLCK GRL A + +++ PN+ Y ++
Sbjct: 425 LQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALING 484
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K+ + + S M + Y T+I K + EA+ + +M+ G LD
Sbjct: 485 FCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLD 544
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHL 299
+ +Y +LI C++ K++ A L +++ +G + D H ILI GLC AG + + ++L
Sbjct: 545 VNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLS 604
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHNLCKA 355
E K N+ YN ++D + G D A + + E+ V D +Y++ + LC
Sbjct: 605 EMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSC 664
Query: 356 KRLPSASKLLLSCLKSGV 373
R P +LL L SG+
Sbjct: 665 NRTPEGVQLLNEMLASGI 682
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 177/356 (49%), Gaps = 11/356 (3%)
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD----LTPCTATFNIMLNGLCKNR 115
+G P V S+N+L+ + + +A+ F + G + P T+NIML LC
Sbjct: 114 LGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRG 173
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D A+ +F L+ G P+ +TY+ L+ G K RL A ++L E+ P+A+ Y
Sbjct: 174 DLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYN 233
Query: 176 TIMKCCFRNRKYKLGLEILSAMKR-KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
++ CFRN +++ + + + R G + + Y ++ K+G KEA D E+MV
Sbjct: 234 ALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVA 293
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
+ Q D+++Y T+I+ C+ +++A + EM K G D + L+ G C AG +
Sbjct: 294 NNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGE 353
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMV 349
A + M+ G N+ +YN ++ L G +D A +++E +E DS T+S+M+
Sbjct: 354 AWKFWDSMSVSGI-RNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMI 412
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
H LC+ + ++L SG + + + +++ GL G +A K+ KI M
Sbjct: 413 HGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISM 468
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 149/306 (48%), Gaps = 1/306 (0%)
Query: 23 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 82
++ +SPD+VT++++I G + SL +L+E G D +SY+S++ L + G+
Sbjct: 397 KDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRL 456
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
D+A ++++ + P + +N ++NG C+ +A+R++ + ++ P +TYN L
Sbjct: 457 DDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTL 516
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
I GLCKA + A +E+ + G + TY ++++ R++K L + + + KG
Sbjct: 517 IHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGL 576
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT-DGVQLDIVSYNTLINLYCKEGKLEAAY 261
D + +I G++ EA+ + +M + ++V+YNTL++ + + G + A
Sbjct: 577 QTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAA 636
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
L + + G D ++ I GLC L M G +N +V +
Sbjct: 637 SLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAV 696
Query: 322 GKDGKI 327
K G I
Sbjct: 697 IKYGPI 702
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 1/183 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + M E G DV TY SLI G R+ + +L L +++L+ G
Sbjct: 516 LIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKG 575
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ DV +N L+H L GK DEA+++ +M + P T+N +++G + D A
Sbjct: 576 LQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKA 635
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + ++G VP++++YN IKGLC R +L E+ SG P AIT+ +++
Sbjct: 636 ASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRA 695
Query: 181 CFR 183
+
Sbjct: 696 VIK 698
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 3/224 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +CQ F + ++M E SP +TYN+LI G + + EMLE G
Sbjct: 481 LINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKG 540
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
DV +Y SL+ L + K D A ++ ++ L NI+++GLC D A
Sbjct: 541 CMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEAS 600
Query: 122 RMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK- 179
++ + +K+ P +VTYN L+ G + G A + + ++G P+ I+Y T +K
Sbjct: 601 QLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKG 660
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
C NR + G+++L+ M G + ++ A +K G ++
Sbjct: 661 LCSCNRTPE-GVQLLNEMLASGIIPTAITWNILVRAVIKYGPIQ 703
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 199/407 (48%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID YC ++ M+ G+ P++ TY+S+I ++ + +L EM++ G
Sbjct: 151 IIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRG 210
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD Y +L+ +LG A ++F +M ++ P + F+ ++ GL + A
Sbjct: 211 VFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEAD 270
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + K GF P+ VTY LI G CK G ++ A ++ ++ G PN +TYT +
Sbjct: 271 KLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGL 330
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + E+L M RKG + Y T++ K G + +A ME+M G+ D
Sbjct: 331 CKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDT 390
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y TL++ Y K G++ A LL EM +G + T +L++GLC +G ++ L++
Sbjct: 391 ITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKW 450
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
M + G N YN I+ + + + ++ M V DS TY+ ++ CKA+
Sbjct: 451 MLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARN 510
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A L ++ + S+ A++ G EA+++ ++R
Sbjct: 511 MKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMR 557
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 181/363 (49%), Gaps = 4/363 (1%)
Query: 41 ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPC 100
+++ +L L + E ++G+ + SYN LM+ LF+LGK EA+ + M P
Sbjct: 85 SSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPD 144
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
++ +++G C +++ + +Q G P L TY+ +I LCK+G++ +L+
Sbjct: 145 VVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLR 204
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
E+ G P+ + YTT++ + + ++ S M+ + D + +I G
Sbjct: 205 EMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSG 264
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
++ EA +M+ G + D V+Y LI+ YCK G+++ A+ L ++M + G + T+T
Sbjct: 265 KVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYT 324
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV- 339
L DGLCK+G + A L M + G N+ YN IV+ L K G I A+ + E M+
Sbjct: 325 ALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEA 384
Query: 340 ---KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
D+ TY++++ K + A +LL L G++ +++GL SG +
Sbjct: 385 GLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDG 444
Query: 397 KKI 399
+++
Sbjct: 445 ERL 447
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 178/352 (50%), Gaps = 3/352 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ + A Y + + M I PD + +++LI G + + + + L +EM++ G
Sbjct: 221 LIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKG 280
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +Y +L+ +LG+ +A + M+ LTP T+ + +GLCK+ D A
Sbjct: 281 FEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTAN 340
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G + TYN ++ GLCKAG + A +++E+ ++G P+ ITYTT+M
Sbjct: 341 ELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAY 400
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + E+L M +G + ++ G+L++ ++ M+ G+ +
Sbjct: 401 YKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNA 460
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLE 300
+YN+++ YC + + + M QG D T+ ILI G CKA N+K A LH E
Sbjct: 461 ATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKE 520
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
+ K F+ +YN ++ K K+ A +FE M ++ S+ ++NL
Sbjct: 521 MVEK-RFNLTASSYNALIKGFFKRKKLLEARQLFEEMR-REGLVASAEIYNL 570
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 179/357 (50%), Gaps = 4/357 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+++ + + +L RM G PDVV+Y ++I G L + L+ EM
Sbjct: 115 ILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLK 174
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P++++Y+S++ L + GK E +V ++M+ + P + +++G CK T A
Sbjct: 175 GLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAA 234
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F ++ VP+ + ++ LI GL +G++ A + E+ G P+ +TYT ++
Sbjct: 235 YKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDG 294
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + K + + M + G T + Y + K G L A + + +M G+QL+
Sbjct: 295 YCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLN 354
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I +YNT++N CK G + A L++EM++ G D T+T L+D K G + AR L
Sbjct: 355 ISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLR 414
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 353
M G + +N +++ L GK++ + + M K ++ TY+S++ C
Sbjct: 415 EMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYC 471
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 149/293 (50%), Gaps = 2/293 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ + + N+M + G++P+VVTY +L G ++ L + +LL EM G
Sbjct: 291 LIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKG 350
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ ++ +YN++++ L + G +A ++ ++M L P T T+ +++ K A
Sbjct: 351 LQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKAR 410
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-C 180
+ R + G P +VT+N+L+ GLC +G+L +LK + + G PNA TY +IMK
Sbjct: 411 ELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQY 470
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C RN ++ EI M +G D Y +I K +KEA ++MV L
Sbjct: 471 CIRN-NMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLT 529
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
SYN LI + K KL A L +EM ++G + + +D + GN++
Sbjct: 530 ASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNME 582
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 157/316 (49%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ N M + G PD VTY +LI G + + + L ++M+++G+ P+V +Y +L L
Sbjct: 272 LFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLC 331
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G+ D AN + +M L +T+N ++NGLCK A+++ +++ G P+ +
Sbjct: 332 KSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTI 391
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY L+ K G + AR +L+E+ D G P +T+ +M + K + G +L M
Sbjct: 392 TYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWM 451
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
KG + Y +++ + ++ +T+ M GV D +YN LI +CK +
Sbjct: 452 LEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNM 511
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A+ L EM ++ F ++ LI G K + AR E M + G ++ E YN
Sbjct: 512 KEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLF 571
Query: 318 VDRLGKDGKIDHAINV 333
VD ++G ++ + +
Sbjct: 572 VDMNYEEGNMETTLEL 587
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 185/390 (47%), Gaps = 8/390 (2%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + + G+ + +YN L+ R + + LL M G PDV SY +++
Sbjct: 97 VFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYC 156
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+G+ + ++ ++M L P T++ ++ LCK+ ++ R + K G P+ V
Sbjct: 157 HVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHV 216
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
Y LI G CK G + A + E+ P++I ++ ++ + K ++ + M
Sbjct: 217 IYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEM 276
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+KG+ D Y +I + K+G +K+A QMV G+ ++V+Y L + CK G+L
Sbjct: 277 IKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGEL 336
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A LL EM ++G + + T+ +++GLCKAGNI A +E M + G + Y +
Sbjct: 337 DTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTL 396
Query: 318 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+D K G++ A + M + T++ +++ LC + +L +LL L+ G+
Sbjct: 397 MDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGI 456
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A + + C R +I ++I
Sbjct: 457 M----PNAATYNSIMKQYCIRNNMRISTEI 482
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 130/265 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L D C+ D +L+ M G+ ++ TYN+++ G + + ++ L++EM E G
Sbjct: 326 LADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAG 385
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y +LM ++ G+ +A + ++M+ L P TFN+++NGLC + ++
Sbjct: 386 LHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGE 445
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + + + G +P TYN ++K C +R + I + + G P++ TY ++K
Sbjct: 446 RLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGH 505
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R K + M K + Y +I F K +L EA E+M +G+
Sbjct: 506 CKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASA 565
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDE 266
YN +++ +EG +E L DE
Sbjct: 566 EIYNLFVDMNYEEGNMETTLELCDE 590
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 175/387 (45%), Gaps = 38/387 (9%)
Query: 23 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 82
++ G P V ++ LL+ + D++L G+ S N + CL K
Sbjct: 33 KDWGSDPHV--FDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSS--KR 88
Query: 83 DEAN---RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
D +VF + + T ++NI++N L + A + ++ G +P++V+Y
Sbjct: 89 DMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSY 148
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
+I G C G L+ ++KE+ G PN TY++I+ ++ K G ++L M +
Sbjct: 149 TTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMK 208
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
+G D Y T+I F K+G + A +M + D ++++ LI GK+
Sbjct: 209 RGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVE 268
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A L +EM K+GFE D+ T+T LIDG CK G +K A M +IG N+
Sbjct: 269 ADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNV-------- 320
Query: 320 RLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
TY+++ LCK+ L +A++LL + G+++ S
Sbjct: 321 -----------------------VTYTALADGLCKSGELDTANELLHEMCRKGLQLNIST 357
Query: 380 QKAVVDGLRHSGCRREAKKIQSKIRMA 406
+V+GL +G +A K+ +++ A
Sbjct: 358 YNTIVNGLCKAGNILQAVKLMEEMKEA 384
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ C + G +L M E GI P+ TYNS++ + + S ++ M
Sbjct: 430 VLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQ 489
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G+ PD +YN L+ HC + EA + ++M+ +++N ++ G K +
Sbjct: 490 GVVPDSNTYNILIKGHC--KARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLL 547
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 155
A ++F +++ G V YN+ + + G + T
Sbjct: 548 EARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETT 584
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 198/447 (44%), Gaps = 39/447 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D+YC+ D +L+ M+E G P+ VTYN L+ G ++ L + L++EML G
Sbjct: 221 MLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSG 280
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEA--------NRV------------------------- 88
+ ++YN L++ Q G EA NR
Sbjct: 281 LNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVR 340
Query: 89 --FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
F DM+ TP +FN +L G C+ A +F L+ VP ++TYN LI GL
Sbjct: 341 LRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL 400
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C G L A + KE+ D G P+ TYT ++ CF+ + + M KG D
Sbjct: 401 CMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDR 460
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
F Y T I +KI A E+M+ G D+++YN ++ C++G E A LL+
Sbjct: 461 FAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLEN 520
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M G D T+T +I+G K G+++ AR M G ++ Y ++
Sbjct: 521 MVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQM 580
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+D A F M K + TY+++++ LC +R+ A K + G+ K +
Sbjct: 581 LDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTI 640
Query: 383 VVDGLRHSGCRREAKKIQSKIRMAKIS 409
+++ + G EA ++ ++ KI
Sbjct: 641 LINESCNMGYWEEALRLYREMLDRKIQ 667
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 169/338 (50%), Gaps = 5/338 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ YC+ + + + ++ + P V+TYN+LI G L +L L EM + G
Sbjct: 361 LLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQG 420
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+++Y L++ F+LG A F +M+ L P +N + G K T A
Sbjct: 421 LFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAF 480
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + GF P+++TYN+ + LC+ G A +L+ + G P+ +TYT+I+
Sbjct: 481 SMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGF 540
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N + E+ + M KG Y +I A L A Y +M+ V ++
Sbjct: 541 VKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANV 600
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLE 300
++YN +IN C +++ AY DEME++G +K+++TILI+ C G + A RL+ E
Sbjct: 601 ITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYRE 660
Query: 301 YMN-KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
++ KI DS ++ + L +D ++ HA+ ES+
Sbjct: 661 MLDRKIQPDSF--THSVFLKNLHRDYQV-HAVQCVESL 695
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 169/355 (47%), Gaps = 4/355 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C++V + M ++ +PD+V++NSL+ G R +S + L DE+
Sbjct: 326 LMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRD 385
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P V +YN+L+H L G D A R+ ++M L P T+ I++NG K Y A
Sbjct: 386 LVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMAR 445
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F + G P+ YN I G K A + +E+ +G P+ ITY +
Sbjct: 446 GFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHAL 505
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ ++L M G D Y ++I FVK G L++A + +M++ GV +
Sbjct: 506 CQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSV 565
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y LI+ + + L+ A++ +M ++ + T+ +I+GLC + A + +
Sbjct: 566 VTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDE 625
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
M + G N +Y +++ G + A+ ++ M + DSFT+S + NL
Sbjct: 626 MEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNL 680
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 172/382 (45%), Gaps = 39/382 (10%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M + GI P VVTYN+++ + + +L+LL EM E G P+ +YN L++ L + G+
Sbjct: 206 MEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGE 265
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
++A + ++M+ L T+N ++NG C+ A + + P L TYN
Sbjct: 266 LEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNT 325
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
L+ GLCK ++ R ++ S P+ +++ +++
Sbjct: 326 LMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLL----------------------- 362
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+GYC + G + EA +++ + +++YNTLI+ C G L+AA
Sbjct: 363 -----YGYC-------RTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAAL 410
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
L EM QG D +T+TIL++G K G + AR M G + AYN +
Sbjct: 411 RLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGE 470
Query: 322 GKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
K A ++ E M D TY+ VH LC+ A LL + + G+
Sbjct: 471 MKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDH 530
Query: 378 SAQKAVVDGLRHSGCRREAKKI 399
++++G +G R+A+++
Sbjct: 531 VTYTSIINGFVKNGHLRKAREV 552
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 124/248 (50%), Gaps = 4/248 (1%)
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F + ++G +P++ N +++ L L A+ + + G P +TY T++
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + LE+LS M+ +G + Y ++ K G L++A +E+M+ G+ +
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+YN LIN +C++G A+ L++EM + T+ L+ GLCK + G RL
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFS 344
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAK 356
M K F ++ ++N ++ + G I A +F+ ++ +D TY++++H LC
Sbjct: 345 DMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWG 404
Query: 357 RLPSASKL 364
L +A +L
Sbjct: 405 YLDAALRL 412
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ + A CQ +F+ +L M G+ PD VTY S+I G +N L + ++ +EML
Sbjct: 500 VFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSK 559
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P V +Y L+H D A F M+ + T+N ++NGLC R D A
Sbjct: 560 GVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEA 619
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ F +++ G +P +Y ILI C G A + +E+ D P++ T++ +K
Sbjct: 620 YKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKN 679
Query: 181 CFRNRK 186
R+ +
Sbjct: 680 LHRDYQ 685
>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
Length = 794
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 194/406 (47%), Gaps = 23/406 (5%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
+RM E P YN+++ + ++ +L L + M+ G P+ +YN LM L +
Sbjct: 160 FSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCK 219
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
G +A ++F +M+ + P + ++L+ LC D A+++ ++ G +P+ VT
Sbjct: 220 QGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVT 279
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
YN + GLCK GR+ A L L D G A Y+ ++ F+ R++ G M
Sbjct: 280 YNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTML 339
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
+ + D Y +I + GR+++A +++ M G D YNT++ + C G LE
Sbjct: 340 ERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLE 399
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A+ L EM + D T TI+I GLCK G + A + M + G D + YN ++
Sbjct: 400 RAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALI 459
Query: 319 DRLGKDGKIDHAINVFESME-----------------VKDSFTYSSMVHNLCKAKRLPSA 361
D ++G+++ A +F ME V DS + +VH++C++ ++ A
Sbjct: 460 DGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKA 519
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
KLL S + SGV +++GL C+ A+ + +R+ K
Sbjct: 520 YKLLRSIIDSGVVPDVVTYNTLINGL----CK--ARNLDGAVRLFK 559
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 189/398 (47%), Gaps = 24/398 (6%)
Query: 13 DAGYTIL-----NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 67
D+G +L NRM AG +P+ TYN L+ G + + +L + DEML+ GI P+V
Sbjct: 184 DSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVK 243
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
Y L+ L GK DEA ++ M P T+N L+GLCK + A + L
Sbjct: 244 IYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVML 303
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
Q GF L Y+ LI GL +A R K + + +P+ + YT +++ C +
Sbjct: 304 QDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRI 363
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
+ L L MK+KG+ D F Y TV+ G L+ A +M+ + + LD + +
Sbjct: 364 EDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIM 423
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
I CK G ++ A + DEM + G + T+ LIDG + G ++ AR+ M ++G
Sbjct: 424 ICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGN 482
Query: 308 DSNL--------------EAYNCIVDRLGKDGKIDHAI----NVFESMEVKDSFTYSSMV 349
+ +L E+ +V + + G++ A ++ +S V D TY++++
Sbjct: 483 NPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLI 542
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ LCKA+ L A +L G+ + ++DGL
Sbjct: 543 NGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGL 580
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 160/335 (47%), Gaps = 26/335 (7%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID Q FD G+ M E ISPDVV Y +I G + +L LD M + G
Sbjct: 318 LIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKG 377
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD + YN+++ L G + A+ + +M+ +L + T IM+ GLCK D A+
Sbjct: 378 FVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAM 437
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI--MK 179
++F + +HG P ++TYN LI G + GRL AR + ++ + G+ P+ T+ +
Sbjct: 438 QIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSLFLRLTLGANQ 496
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
C KL + + G++ +A + ++ GV
Sbjct: 497 VCDSESLRKL-----------------------VHDMCQSGQVLKAYKLLRSIIDSGVVP 533
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+V+YNTLIN CK L+ A L E++ +G D+ T+ LIDGL +A A +
Sbjct: 534 DVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLF 593
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
+ + + G +L YN ++ L + K+ AIN++
Sbjct: 594 QNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 189/422 (44%), Gaps = 23/422 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ + + M + GI P+V Y L++ + ++ LL M +
Sbjct: 212 VLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDK 271
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD +YN+ + L ++G+ +EA + + G ++ +++GL + R D
Sbjct: 272 GCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEG 331
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + + P++V Y I+I+G +AGR+ A L + G P+ Y T++K
Sbjct: 332 FGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKV 391
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + S M + D +I K G + EA ++M G
Sbjct: 392 LCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPT 451
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE-------------CDKYTHTILIDGLC 287
+++YN LI+ + +EG+LE A +L +ME CD + L+ +C
Sbjct: 452 VMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMC 511
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 343
++G + A L + G ++ YN +++ L K +D A+ +F+ +++K D
Sbjct: 512 QSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEI 571
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
TY +++ L +A R A L + L+SG S ++ + + S CR KK+ I
Sbjct: 572 TYGTLIDGLLRAHRENDAMMLFQNILQSG----SSPSLSIYNSMMRSLCR--MKKLSQAI 625
Query: 404 RM 405
+
Sbjct: 626 NL 627
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 187/424 (44%), Gaps = 25/424 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ + C D +L M++ G PD VTYN+ ++G + ++ + L + +
Sbjct: 247 VLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDG 306
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G + Y+ L+ LFQ + DE ++ M+ +++P + IM+ G + ++A
Sbjct: 307 GFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDA 366
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L ++K GFVP+ YN ++K LC G L A + E+ + ++ T TIM C
Sbjct: 367 LSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTT-QTIMIC 425
Query: 181 CFRNRK-YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM------- 232
R ++I M G Y +I F + GRL+EA +M
Sbjct: 426 GLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPS 485
Query: 233 ----VTDGVQ--LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+T G D S L++ C+ G++ AY LL + G D T+ LI+GL
Sbjct: 486 LFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGL 545
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI----NVFESMEVKDS 342
CKA N+ GA + + G + Y ++D L + + + A+ N+ +S
Sbjct: 546 CKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSL 605
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGV------RILKSAQKAVVDGLRHSGCRREA 396
Y+SM+ +LC+ K+L A L L L +L +A K + DG G R
Sbjct: 606 SIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELI 665
Query: 397 KKIQ 400
K Q
Sbjct: 666 KIDQ 669
>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
Length = 812
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 194/406 (47%), Gaps = 23/406 (5%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
+RM E P YN+++ + ++ +L L + M+ G P+ +YN LM L +
Sbjct: 160 FSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCK 219
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
G +A ++F +M+ + P + ++L+ LC D A+++ ++ G +P+ VT
Sbjct: 220 QGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVT 279
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
YN + GLCK GR+ A L L D G A Y+ ++ F+ R++ G M
Sbjct: 280 YNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTML 339
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
+ + D Y +I + GR+++A +++ M G D YNT++ + C G LE
Sbjct: 340 ERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLE 399
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A+ L EM + D T TI+I GLCK G + A + M + G D + YN ++
Sbjct: 400 RAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALI 459
Query: 319 DRLGKDGKIDHAINVFESME-----------------VKDSFTYSSMVHNLCKAKRLPSA 361
D ++G+++ A +F ME V DS + +VH++C++ ++ A
Sbjct: 460 DGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKA 519
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
KLL S + SGV +++GL C+ A+ + +R+ K
Sbjct: 520 YKLLRSIIDSGVVPDVVTYNTLINGL----CK--ARNLDGAVRLFK 559
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 189/398 (47%), Gaps = 24/398 (6%)
Query: 13 DAGYTIL-----NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 67
D+G +L NRM AG +P+ TYN L+ G + + +L + DEML+ GI P+V
Sbjct: 184 DSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVK 243
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
Y L+ L GK DEA ++ M P T+N L+GLCK + A + L
Sbjct: 244 IYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVML 303
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
Q GF L Y+ LI GL +A R K + + +P+ + YT +++ C +
Sbjct: 304 QDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRI 363
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
+ L L MK+KG+ D F Y TV+ G L+ A +M+ + + LD + +
Sbjct: 364 EDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIM 423
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
I CK G ++ A + DEM + G + T+ LIDG + G ++ AR+ M ++G
Sbjct: 424 ICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGN 482
Query: 308 DSNL--------------EAYNCIVDRLGKDGKIDHAI----NVFESMEVKDSFTYSSMV 349
+ +L E+ +V + + G++ A ++ +S V D TY++++
Sbjct: 483 NPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLI 542
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ LCKA+ L A +L G+ + ++DGL
Sbjct: 543 NGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGL 580
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 160/335 (47%), Gaps = 26/335 (7%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID Q FD G+ M E ISPDVV Y +I G + +L LD M + G
Sbjct: 318 LIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKG 377
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD + YN+++ L G + A+ + +M+ +L + T IM+ GLCK D A+
Sbjct: 378 FVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAM 437
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI--MK 179
++F + +HG P ++TYN LI G + GRL AR + ++ + G+ P+ T+ +
Sbjct: 438 QIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSLFLRLTLGANQ 496
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
C KL + + G++ +A + ++ GV
Sbjct: 497 VCDSESLRKL-----------------------VHDMCQSGQVLKAYKLLRSIIDSGVVP 533
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+V+YNTLIN CK L+ A L E++ +G D+ T+ LIDGL +A A +
Sbjct: 534 DVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLF 593
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
+ + + G +L YN ++ L + K+ AIN++
Sbjct: 594 QNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 189/422 (44%), Gaps = 23/422 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ + + M + GI P+V Y L++ + ++ LL M +
Sbjct: 212 VLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDK 271
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD +YN+ + L ++G+ +EA + + G ++ +++GL + R D
Sbjct: 272 GCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEG 331
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + + P++V Y I+I+G +AGR+ A L + G P+ Y T++K
Sbjct: 332 FGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKV 391
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + S M + D +I K G + EA ++M G
Sbjct: 392 LCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPT 451
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE-------------CDKYTHTILIDGLC 287
+++YN LI+ + +EG+LE A +L +ME CD + L+ +C
Sbjct: 452 VMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMC 511
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 343
++G + A L + G ++ YN +++ L K +D A+ +F+ +++K D
Sbjct: 512 QSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEI 571
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
TY +++ L +A R A L + L+SG S ++ + + S CR KK+ I
Sbjct: 572 TYGTLIDGLLRAHRENDAMMLFQNILQSG----SSPSLSIYNSMMRSLCR--MKKLSQAI 625
Query: 404 RM 405
+
Sbjct: 626 NL 627
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 186/421 (44%), Gaps = 25/421 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ + C D +L M++ G PD VTYN+ ++G + ++ + L + +
Sbjct: 247 VLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDG 306
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G + Y+ L+ LFQ + DE ++ M+ +++P + IM+ G + ++A
Sbjct: 307 GFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDA 366
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L ++K GFVP+ YN ++K LC G L A + E+ + ++ T TIM C
Sbjct: 367 LSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTT-QTIMIC 425
Query: 181 CFRNRK-YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM------- 232
R ++I M G Y +I F + GRL+EA +M
Sbjct: 426 GLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPS 485
Query: 233 ----VTDGVQ--LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+T G D S L++ C+ G++ AY LL + G D T+ LI+GL
Sbjct: 486 LFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGL 545
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI----NVFESMEVKDS 342
CKA N+ GA + + G + Y ++D L + + + A+ N+ +S
Sbjct: 546 CKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSL 605
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGV------RILKSAQKAVVDGLRHSGCRREA 396
Y+SM+ +LC+ K+L A L L L +L +A K + DG G R
Sbjct: 606 SIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELI 665
Query: 397 K 397
K
Sbjct: 666 K 666
>gi|224115398|ref|XP_002317023.1| predicted protein [Populus trichocarpa]
gi|222860088|gb|EEE97635.1| predicted protein [Populus trichocarpa]
Length = 455
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 203/411 (49%), Gaps = 5/411 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ + ++ +M E G + VTYNSL+ G + L+ SL LLD+++ G
Sbjct: 26 LVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKLMWKG 85
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ ++Y+ L+ ++ +EA ++ ++I P ++N++L GLCK T+ A+
Sbjct: 86 LVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNLVSYNVLLTGLCKEGRTEEAI 145
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R FR L GF P +V+YNI+++ LC GR A +L E+ +P+ +TY ++
Sbjct: 146 RFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEERSPSLVTYNILIGSL 205
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + E+L M R + Y +IA K G+L ++QM+ +
Sbjct: 206 AFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQMIHHRCNPNE 265
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++N I + CK+G++ A+ ++ + + + +I LC+ GN A L
Sbjct: 266 GTFNA-IAVLCKQGRVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNTYPAFQLLYE 324
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKR 357
M K GF + Y+ ++ L +G +D A+ +F +E D +++++ CK+ R
Sbjct: 325 MTKFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRLLEENDYRPILDNFNALILGFCKSGR 384
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+ +L ++ G ++ +V+G+ H + A ++ ++ + ++
Sbjct: 385 TDLSLDILEMMVEKGYTPNETTYTIIVEGIAHEEEKELAAEVLKELLLRQV 435
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 156/315 (49%), Gaps = 9/315 (2%)
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+A RV + MI + P A++ ++N LCK +A+++ ++++G+ VTYN L+
Sbjct: 3 KATRVMEMMIESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLV 62
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
+GLC G L + +L +L G PN TY+ +++ ++ R +++L + KG+
Sbjct: 63 RGLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQ 122
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
+ Y ++ K GR +EA + + + G ++VSYN ++ C EG+ E A L
Sbjct: 123 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQL 182
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
L EM+ + T+ ILI L G I+ A L+ M + F + YN I+ L K
Sbjct: 183 LAEMDSEERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCK 242
Query: 324 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
+GK+D I + M + T+++ + LCK R+P A S +++ +S+
Sbjct: 243 EGKLDLVIKCLDQMIHHRCNPNEGTFNA-IAVLCKQGRVPEA----FSIIQNLGNKQRSS 297
Query: 380 QKAVVDGLRHSGCRR 394
G+ S CR+
Sbjct: 298 THDFYKGVITSLCRK 312
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 129/287 (44%), Gaps = 1/287 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C+ + + G +P+VV+YN ++ + LL EM
Sbjct: 130 VLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSE 189
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P + +YN L+ L G+ + A V +M+ P T+N ++ LCK D
Sbjct: 190 ERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDLV 249
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + H P T+N I LCK GR+ A I++ LG+ + Y ++
Sbjct: 250 IKCLDQMIHHRCNPNEGTFNA-IAVLCKQGRVPEAFSIIQNLGNKQRSSTHDFYKGVITS 308
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R ++L M + G+ D + Y ++I G L EA + + + +
Sbjct: 309 LCRKGNTYPAFQLLYEMTKFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRLLEENDYRPI 368
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
+ ++N LI +CK G+ + + +L+ M ++G+ ++ T+TI+++G+
Sbjct: 369 LDNFNALILGFCKSGRTDLSLDILEMMVEKGYTPNETTYTIIVEGIA 415
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 119/244 (48%), Gaps = 4/244 (1%)
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
++ A +++ + +SG P+A +YT ++ + ++++ M+ GY + Y +
Sbjct: 1 MKKATRVMEMMIESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNS 60
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
++ G L ++ +++++ G+ + +Y+ L+ KE + A LLDE+ +G
Sbjct: 61 LVRGLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKG 120
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
++ + ++ +L+ GLCK G + A + GF+ N+ +YN I+ L +G+ + A
Sbjct: 121 WQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEAN 180
Query: 332 NVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ M+ ++ TY+ ++ +L R+ A ++L +++ + + ++ L
Sbjct: 181 QLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHL 240
Query: 388 RHSG 391
G
Sbjct: 241 CKEG 244
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 198/408 (48%), Gaps = 48/408 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGA------------------- 41
++I+ C+ + D Y I N+M+ ISP V NSLI G
Sbjct: 369 VIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVAC 428
Query: 42 ------TRNSLLS-----------CSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKP 82
T NSLLS CS+ ++M+ G+ P V SYN+++ HC Q G
Sbjct: 429 GIANVFTYNSLLSWLCKEGKMSEACSI--WEKMVRKGVRPSVVSYNNMILGHC--QQGDM 484
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
D AN VF +M+ L P T++++++G K T+ A ++ ++ P T NI+
Sbjct: 485 DSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNII 544
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
I GLCKAGR ++ LK+L G P +TY I+ + L + + M + G
Sbjct: 545 INGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGV 604
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
+ + F Y +I F K + A M++M G++LD+ Y LI+ +C++G + A
Sbjct: 605 SPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQ 664
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRL 321
LL E+++ G +K ++ +I G K N++ A LH +N+ G +L+ Y ++ L
Sbjct: 665 LLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINE-GIPCDLQIYTTLISGL 723
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
K+GK+ A ++ M K D TYS ++H LC +L +A K+L
Sbjct: 724 LKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKIL 771
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 193/395 (48%), Gaps = 6/395 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ +I +M G+ P VV+YN++I G + + + + EMLE G
Sbjct: 439 LLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKG 498
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++ +Y+ LM F+ G + A ++ M ++ P T NI++NGLCK T +
Sbjct: 499 LKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQ 558
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L + GF+P +TYN +I G K G + +A + E+ G +PN TYT ++
Sbjct: 559 DRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGF 618
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ L L+++ MK KG D YC +I F + G + A+ + ++ G+ +
Sbjct: 619 CKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNK 678
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK-GARLHLE 300
V Y+++I+ + K +EAA L M +G CD +T LI GL K G + + L+ E
Sbjct: 679 VVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAE 738
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
+ K G +L Y+ ++ L G++++A + E M+ K F Y++++ K
Sbjct: 739 MLAK-GIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEG 797
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
L A +L L G+ + +V+G G
Sbjct: 798 NLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDG 832
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 191/395 (48%), Gaps = 7/395 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ YC+ D+ + ++M E GI P+ VTY +I +N + + ++ ++M
Sbjct: 335 LMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKD 394
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P V++ NSL+ + P+EA+++F + + CG T+N +L+ LCK A
Sbjct: 395 ISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACG--IANVFTYNSLLSWLCKEGKMSEA 452
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + + G P +V+YN +I G C+ G + +A + E+ + G PN ITY+ +M
Sbjct: 453 CSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDG 512
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+ + + M+ + F +I K GR E+ D ++++V +G
Sbjct: 513 YFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPT 572
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++YN +I+ + KEG + +A + EM K G + +T+T LI+G CK+ N+ A ++
Sbjct: 573 CMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMD 632
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M G + ++ Y ++D + G + +A + ++ + YSSM+ K +
Sbjct: 633 EMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQ 692
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ +A L + G+ ++ GL G
Sbjct: 693 NMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEG 727
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 189/413 (45%), Gaps = 5/413 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+A C+ A +L MR+ G P V + +I + + ++ + EML
Sbjct: 264 IVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSC 323
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +V +LM + G D A +F M + P T+ +++ CKN D A
Sbjct: 324 GKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKA 383
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ ++ P + N LI+G KA A + E G A N TY +++
Sbjct: 384 YEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSW 442
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K I M RKG Y +I + G + A +M+ G++ +
Sbjct: 443 LCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPN 502
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++Y+ L++ Y K+G E A+ L D M + +T I+I+GLCKAG ++ L+
Sbjct: 503 LITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLK 562
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
+ + GF YNCI+D K+G ++ A+ V+ M + FTY+++++ CK+
Sbjct: 563 KLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSN 622
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+ A K++ G+ + + A++DG G A ++ S+++ +S
Sbjct: 623 NMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLS 675
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 171/328 (52%), Gaps = 2/328 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D Y + + + + +RMR I+P T N +I G + S S D L ++++
Sbjct: 508 VLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQE 567
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +YN ++ + G + A V+ +M ++P T+ ++NG CK+ D A
Sbjct: 568 GFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLA 627
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L++ ++ G ++ Y LI G C+ G + A +L EL + G +PN + Y++++
Sbjct: 628 LKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISG 687
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + L + M +G D Y T+I+ +K G+L A++ +M+ G+ D
Sbjct: 688 FRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPD 747
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
+++Y+ LI+ C +G+LE A +L++M+++ + + LI G K GN++ A RLH
Sbjct: 748 LITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHN 807
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
E ++K G + Y+ +V+ KDG +
Sbjct: 808 EMLDK-GLVPDDTTYDILVNGKVKDGNL 834
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 148/325 (45%), Gaps = 3/325 (0%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 112
L++ + D +N L++ + + ++A F +I D+ PC NI L+ L
Sbjct: 141 LIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELV 200
Query: 113 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
KN A ++ + G + T +++I+ + G+L A +E + G +A
Sbjct: 201 KNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDAR 260
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
Y+ +++ + L +L M+ KG+ + VI +K G++ EA +M
Sbjct: 261 AYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEM 320
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
++ G +++V TL+ YCK+G L++A L D+M + G + T+ ++I+ CK GN+
Sbjct: 321 LSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNM 380
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDSFTYSSMV 349
A M + N ++ K + A +F+ + + FTY+S++
Sbjct: 381 DKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLL 440
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVR 374
LCK ++ A + ++ GVR
Sbjct: 441 SWLCKEGKMSEACSIWEKMVRKGVR 465
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 174/396 (43%), Gaps = 5/396 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
++ R D +N L+ + ++ ++D + ++E I P + N + L
Sbjct: 141 LIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELV 200
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ EA V+ M + AT ++M+ + + A FR + G +
Sbjct: 201 KNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDAR 260
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
Y+I+I+ +CK A +L+E+ D G P+ + +T ++ C + K +++ M
Sbjct: 261 AYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEM 320
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
G + T++ + K G L A + ++M +G+ + V+Y +I CK G +
Sbjct: 321 LSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNM 380
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ AY + ++M+ + + LI G KA + + A + G +N+ YN +
Sbjct: 381 DKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSL 439
Query: 318 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ L K+GK+ A +++E M K +Y++M+ C+ + SA+ + + L+ G+
Sbjct: 440 LSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGL 499
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+ ++DG G A + ++R I+
Sbjct: 500 KPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIA 535
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 202/408 (49%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I C+ + +A + + + M+EAG+ P+V T N +I + L + + + M
Sbjct: 275 IIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYK 334
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PD ++ SL+ L + G+ D+A R+++ M+ D P + ++ K ++
Sbjct: 335 VCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDG 394
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+M++ + + G P+L+ N + + KAG R + +E+ G P+ +Y+ ++
Sbjct: 395 HKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHS 454
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + E+ AMK +G D Y TVI F K G++ +A +E+M T G
Sbjct: 455 LVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPT 514
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+Y ++++ K +L+ AY+L +E + G E ++ ++ LIDG K G + A L +E
Sbjct: 515 VVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVME 574
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + G N+ +NC++D L K +I+ A+ F+SM+ + TY +++ LCK +
Sbjct: 575 EMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVR 634
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A K G++ A++ GL SG +A + + R
Sbjct: 635 KFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFR 682
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 202/450 (44%), Gaps = 40/450 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ D +I M SPD T+ SLI G + + + + + ML+
Sbjct: 310 IMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDA 369
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+V Y SL+ F+ + ++ ++++++M+ +P N ++ + K T+
Sbjct: 370 DQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKG 429
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F ++ GF+P+ +Y+ILI L KAG R + + D G + Y T++
Sbjct: 430 RALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDG 489
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K ++L MK G+ Y +V+ KI RL EA E+ ++G++L+
Sbjct: 490 FCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELN 549
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY----------------------- 277
V Y++LI+ + K G+++ AYL+++EM ++G + Y
Sbjct: 550 QVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQ 609
Query: 278 ------------THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
T+ ILI+GLCK A + + M K G N Y ++ L K G
Sbjct: 610 SMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSG 669
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+ A ++FE + DS +Y++M+ L A R A +L G I
Sbjct: 670 NVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCV 729
Query: 382 AVVDGLRHSGCRREAKKIQSKIR-MAKISH 410
A++D L + C +A + + +R AK H
Sbjct: 730 ALLDALHKAECLEQAAIVGAVLRETAKSQH 759
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 162/375 (43%), Gaps = 40/375 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI A + D + N+M+E G +V +LI +R + +L LLDEM
Sbjct: 67 LIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNT 126
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
D+ YN + C ++GK D A + F +M L P T+ M+ LCK D A+
Sbjct: 127 FDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAV 186
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++++ VP YN +I G AG+ A +L+ G P+ + Y I+ C
Sbjct: 187 EIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCL 246
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K L I MKR D M + T
Sbjct: 247 GKKGKTDKALRIFEEMKR---------------------------DAMPNLPT------- 272
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
YN +I + CK G +EAA+ + D M++ G + T I+ID LCKA + A E
Sbjct: 273 --YNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEG 330
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
M+ + + ++D LGK G++D A ++E M ++ + Y+S++ N K R
Sbjct: 331 MDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDR 390
Query: 358 LPSASKLLLSCLKSG 372
K+ ++SG
Sbjct: 391 KEDGHKMYKEMMRSG 405
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 165/358 (46%), Gaps = 5/358 (1%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
+FD IL M AG P T L+A ++ L + DLL M P +Y
Sbjct: 6 NFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYT 65
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+L+ L ++G+ D +F M ++ + D AL + ++ +
Sbjct: 66 TLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSN 125
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
F ++V YN+ I K G++ A E+ +G P+ +TYT++M + +
Sbjct: 126 TFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEA 185
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+EI M++ + Y T+I + G+ EA +E+ G +V+YN ++
Sbjct: 186 VEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTC 245
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
K+GK + A + +EM++ + T+ I+I LCKAGN++ A + M + G N
Sbjct: 246 LGKKGKTDKALRIFEEMKRDAMP-NLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPN 304
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
+ N ++DRL K K+D A ++FE M+ K D T+ S++ L K R+ A ++
Sbjct: 305 VRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRI 362
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 83/208 (39%), Gaps = 38/208 (18%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATR----NSLLSCSLDLLD-- 55
LID + + D Y ++ M + G++P+V T+N L+ G + N L C + D
Sbjct: 556 LIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLK 615
Query: 56 -----------------------------EMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
EM + G+ P+ +Y +++ L + G +A+
Sbjct: 616 CTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQAS 675
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+F+ P +A++N M+ GL +A ++F + G T L+ L
Sbjct: 676 SLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDAL 735
Query: 147 CKAGRLRTAR---WILKELGDSGHAPNA 171
KA L A +L+E S HA +
Sbjct: 736 HKAECLEQAAIVGAVLRETAKSQHAARS 763
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 191/425 (44%), Gaps = 40/425 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRM--REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM-- 57
L+D++C+ D +L M R AG P+ VTYN +I G R L + L+D M
Sbjct: 235 LLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRL 294
Query: 58 -----------------------------LEM---GIPPDVWSYNSLMHCLFQLGKPDEA 85
LEM GI P V +YN+L+ LF+ G + A
Sbjct: 295 SKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAA 354
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
F +M L P T+N ++NG CK AL +F L++ G P ++TYNILI G
Sbjct: 355 QVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDG 414
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
C+ G L AR + +E+ + P+ TYT +M R + M KG D
Sbjct: 415 YCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPD 474
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
F Y T I+A + IG + A E+M+ G+ D V+YN LI+ CK G L+ AY+L
Sbjct: 475 CFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWM 534
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+M G D T+T LI C+ G + A+ + M G ++ Y + + G
Sbjct: 535 KMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRG 594
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+ A F M + + TY+ ++H LC+ R SA + L+ G+ K
Sbjct: 595 NLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYT 654
Query: 382 AVVDG 386
++DG
Sbjct: 655 LLIDG 659
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 169/374 (45%), Gaps = 4/374 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L M GI P VVTYN+LI G + + DEM G+ PD+ +YNSL++
Sbjct: 322 LLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYC 381
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G +A +F D+ L P T+NI+++G C+ + A R+ + + +P++
Sbjct: 382 KAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVC 441
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY IL+ G C L R E+ G P+ Y T + ++ M
Sbjct: 442 TYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEM 501
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+G + D Y +I K G LK+A +MVTDG++LD V+Y LI+ +C+ G+L
Sbjct: 502 MLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRL 561
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A + D M G T+TI I C+ GN+ A M + G + N YN +
Sbjct: 562 IEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVL 621
Query: 318 VDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ L + G+ + A F M V + +TY+ ++ CK A +L + G+
Sbjct: 622 MHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGI 681
Query: 374 RILKSAQKAVVDGL 387
A+ G
Sbjct: 682 HPDHCTHNALFKGF 695
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 156/339 (46%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID + + +A + MR G+ PD++TYNSLI G + L +L L ++ G
Sbjct: 341 LIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAG 400
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P V +YN L+ +LG + A R+ ++M D P T+ I++NG C R
Sbjct: 401 LGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVR 460
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F + G P+ YN I G + A + +E+ G + + +TY ++
Sbjct: 461 IFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGL 520
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + M G D Y +I A + GRL EA + + MV G+ +
Sbjct: 521 CKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSV 580
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y I+ YC+ G L AY +M ++G E ++ T+ +L+ LC+ G + A H
Sbjct: 581 VTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHE 640
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
M + G N Y ++D K+G HAI ++ M K
Sbjct: 641 MLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQK 679
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 161/338 (47%), Gaps = 38/338 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID YC+ + + M E PDV TY L+ G+ L+ DEML
Sbjct: 410 ILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSK 469
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD ++YN+ + +G A ++ ++M+ ++ T T+N++++GLCK +A
Sbjct: 470 GLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDA 529
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G + VTY LI C+ GRL A+ I + SG +P+ +TYT
Sbjct: 530 YVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIF--- 586
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
I + + G L A + +M+ +GV+ +
Sbjct: 587 --------------------------------IHTYCRRGNLYLAYGWFRKMLEEGVEPN 614
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHL 299
V+YN L++ C+ G+ E+AY EM ++G +KYT+T+LIDG CK GN + RL+
Sbjct: 615 EVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYC 674
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
E M++ G + +N + G +G + A+ E++
Sbjct: 675 E-MHQKGIHPDHCTHNALFKGFG-EGHMYDAVQYLENV 710
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 174/406 (42%), Gaps = 51/406 (12%)
Query: 41 ATRNSLLSCS---LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 97
A ++ SCS L EM G+ P V N ++ L + D+ V+ DM+ +
Sbjct: 166 AQKSVPASCSTQCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGV 225
Query: 98 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH--GFVPELVTYNILIKGLCKAGRLRTA 155
P T+N +L+ CK D A+ + + ++ G +P VTYN++I GL + G L A
Sbjct: 226 EPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKA 285
Query: 156 RW----------------------------------ILKELGDSGHAPNAITYTTIMKCC 181
+L E+ + G P +TY T++
Sbjct: 286 AQLVDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGL 345
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ + M+ KG D Y ++I + K G LK+A + G+ +
Sbjct: 346 FKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTV 405
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN LI+ YC+ G LE A L +EM ++ D T+TIL++G C N+ R+ +
Sbjct: 406 LTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDE 465
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G + + AYN + G I +A + E M ++ D+ TY+ ++ LCK
Sbjct: 466 MLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGS 525
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR----EAKKI 399
L A L + + G+R+ L H+ C R EAK I
Sbjct: 526 LKDAYVLWMKMVTDGLRL----DCVTYTCLIHAHCERGRLIEAKNI 567
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 189/387 (48%), Gaps = 5/387 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
++N M + G+ PDVVTYNS++ + + + +L +M++ G+ PD +Y +++H
Sbjct: 286 LINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYS 345
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
G E+ ++F+ M L P TFN ++ LCK+ + +A +F+ + G +P+LV
Sbjct: 346 CSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLV 405
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
+Y+IL+ G GR + + D G N + ++ + + + + M
Sbjct: 406 SYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEM 465
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ +G D Y T+I+AF ++GRL +A + QM++ G++ + V Y++LI+ +C G L
Sbjct: 466 QGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDL 525
Query: 258 EAAYLLLDEMEKQGFECDKYT-HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
A L+ EM +G + +I LC G + A + IG + +N
Sbjct: 526 VKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNS 585
Query: 317 IVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++D GK++ A V ++M D TY+++V CK+ ++ L L
Sbjct: 586 LIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKK 645
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKI 399
V+ V+DGL H+G AKK+
Sbjct: 646 VKPTTVTYSIVLDGLFHAGRTSAAKKM 672
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 194/400 (48%), Gaps = 11/400 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++DA C+ + D +L +M + G+ PD +TY ++I G + + S + +M G
Sbjct: 305 IVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKG 364
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC-KNRYTDNA 120
+ P + ++NS M L + G+ +A +FQ M P +++I+L+G + R+ D
Sbjct: 365 LIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMN 424
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G V +NILI K G + A + E+ G P+ +TY+T++
Sbjct: 425 -NLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISA 483
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV-QL 239
R + +E S M G + Y ++I F G L +A + + +M++ G+ +
Sbjct: 484 FCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRP 543
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+IV ++++I+ C EG++ A+ + + + G T LIDG C G ++ A L
Sbjct: 544 NIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVL 603
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKD-SFTYSSMVHNLCKA 355
+ M +G + ++ YN +V K GKID + +F M +VK + TYS ++ L A
Sbjct: 604 DAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHA 663
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
R +A K+ + SG + K ++ GL CR +
Sbjct: 664 GRTSAAKKMFHEMIDSGTAVDIDTYKILLKGL----CRND 699
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 152/339 (44%), Gaps = 1/339 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI A+ + D + M+ G+ PDVVTY++LI+ R L+ +++ +M+ +
Sbjct: 444 ILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISI 503
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDN 119
G+ P+ Y+SL+H G +A + +M+ G P F+ +++ LC +
Sbjct: 504 GLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMD 563
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +F + G P +VT+N LI G C G++ A +L + G P+ +TY T++
Sbjct: 564 AHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVS 623
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
++ K GL + M K Y V+ GR A +M+ G +
Sbjct: 624 GYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAV 683
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DI +Y L+ C+ + A L ++ + D +I+ L K + A
Sbjct: 684 DIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLF 743
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
++ G N+ Y ++ L K+G ++ A +F SME
Sbjct: 744 AAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSME 782
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 146/327 (44%), Gaps = 1/327 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI A+C+ ++M G+ P+ V Y+SLI G + L + +L+ EM+ G
Sbjct: 480 LISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKG 539
Query: 62 IP-PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
IP P++ ++S++H L G+ +A+ VF +I P TFN +++G C + A
Sbjct: 540 IPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKA 599
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P++VTYN L+ G CK+G++ + +E+ P +TY+ ++
Sbjct: 600 FGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDG 659
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F + ++ M G D Y ++ + EA ++ + D
Sbjct: 660 LFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFD 719
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I NT+IN K + E A L + G + T+ ++I L K G+++ A
Sbjct: 720 ITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFS 779
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKI 327
M K G + N I+ L + G I
Sbjct: 780 SMEKSGCAPSSRLLNDIIRMLLQKGDI 806
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 121/255 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC + + +L+ M GI PDVVTYN+L++G ++ + L L EML
Sbjct: 586 LIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKK 645
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P +Y+ ++ LF G+ A ++F +MI T+ I+L GLC+N TD A+
Sbjct: 646 VKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAI 705
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F L ++ N +I L K R A + + SG PN TY ++
Sbjct: 706 TLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNL 765
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + S+M++ G +I ++ G + +A YM ++ + L+
Sbjct: 766 LKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEA 825
Query: 242 VSYNTLINLYCKEGK 256
+ + L++L+ +GK
Sbjct: 826 STTSLLMSLFSSKGK 840
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 153/383 (39%), Gaps = 42/383 (10%)
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P V +Y LM C + +PD F ++ L T N L LC + TD A+
Sbjct: 153 PLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVD 212
Query: 123 -MFRGLQKHGFVPELVTYNILIKGLC---------------------------------- 147
+ + G VP ++YN +IK LC
Sbjct: 213 VLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIH 272
Query: 148 ---KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
K G + A ++ E+ G P+ +TY +I+ + R +L M KG
Sbjct: 273 GFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEP 332
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
DG Y +I + G KE+ +M + G+ IV++N+ ++ CK G+ + A +
Sbjct: 333 DGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIF 392
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
M +G D +++IL+ G G M G +N +N ++ K
Sbjct: 393 QYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKR 452
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
G +D A+ VF M+ + D TYS+++ C+ RL A + + G+
Sbjct: 453 GMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVY 512
Query: 381 KAVVDGLRHSGCRREAKKIQSKI 403
+++ G G +AK++ S++
Sbjct: 513 HSLIHGFCMHGDLVKAKELVSEM 535
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 93/190 (48%), Gaps = 5/190 (2%)
Query: 12 FDAGYT-----ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
F AG T + + M ++G + D+ TY L+ G RN L ++ L ++ M D+
Sbjct: 661 FHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDI 720
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
N++++ L+++ + +EAN +F + L P +T+ +M++ L K + A MF
Sbjct: 721 TILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSS 780
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
++K G P N +I+ L + G + A + + ++ + + A T + +M K
Sbjct: 781 MEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGK 840
Query: 187 YKLGLEILSA 196
++ ++ L A
Sbjct: 841 HREQIKFLPA 850
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 184/361 (50%), Gaps = 4/361 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ D + M+ G+ PDV++Y++LI G S L DEM++
Sbjct: 242 IIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQ 301
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD+ +++ L+ L + GK EA ++ + MI + P T+N +++G C ++A
Sbjct: 302 GVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSA 361
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G P+ ++Y LI G CK +++ A + E+ G +PN TY T++K
Sbjct: 362 RELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKG 421
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+ K ++ MK G + + Y + K L EA + ++ + +L+
Sbjct: 422 LFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLN 481
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I +Y+ LI+ CK GKLE A+ L +++ ++G + D T+ I+I G CK G + A + E
Sbjct: 482 IENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFE 541
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAK 356
M + G ++ AYN ++ + K++ I + M KD + + + +V LCK +
Sbjct: 542 KMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDE 601
Query: 357 R 357
+
Sbjct: 602 K 602
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 201/407 (49%), Gaps = 14/407 (3%)
Query: 2 LIDAYCQF----VSFDAGYTILNRMREAGIS--PDVVTYNSLIAGATRNSLLSCSLDLLD 55
LI CQ ++ +LN + G++ P V+TY+ +I G + + +L +
Sbjct: 202 LIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFE 261
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
EM G+ PDV SY++L+H GK D++ +F +M+ + P TF+++++ LCK
Sbjct: 262 EMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEG 321
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
A ++ + + G VP L+TYN LI G C G L +AR + + G P+ I+YT
Sbjct: 322 KVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYT 381
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T++ + K K + + + M + G + + Y T++ + G++ +A M T
Sbjct: 382 TLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTY 441
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
GV + Y ++ CK L A L +E++ F+ + ++ LIDGLCKAG ++ A
Sbjct: 442 GVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETA 501
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 351
E +++ G ++ YN ++ K G++D+A +FE ME D Y++++
Sbjct: 502 WELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCG 561
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
C+ +L KLL ++ V ++ VVD L C+ E K
Sbjct: 562 FCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDML----CKDEKYK 604
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 187/374 (50%), Gaps = 10/374 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML--- 58
LI C + RM++ G +P+ VTY +LI G + ++ +L L EML
Sbjct: 167 LIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDA 226
Query: 59 -EMGI--PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
+ G+ P V +Y+ ++ L ++G+ DEA +F++M + P +++ +++G C
Sbjct: 227 SQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAG 286
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D + +F + G P++VT+++LI LCK G++ A+ +L+ + G PN ITY
Sbjct: 287 KWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYN 346
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
+++ E+ +M KG D Y T+I + K ++KEA + +M+
Sbjct: 347 SLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQV 406
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G ++ +Y TL+ ++GK+ A L M+ G + + I +DGLCK + A
Sbjct: 407 GKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEA 466
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 351
+ F N+E Y+C++D L K GK++ A +FE + + D TY+ M+H
Sbjct: 467 MELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHG 526
Query: 352 LCKAKRLPSASKLL 365
CK ++ +A+ L
Sbjct: 527 FCKVGQVDNANILF 540
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 179/370 (48%), Gaps = 10/370 (2%)
Query: 50 SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 109
+ D M+ P + S+N L+ L ++ + ++ +M L+P T +I+ N
Sbjct: 75 AFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILAN 134
Query: 110 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 169
LC AL G+ + G++P +VTY LIKGLC R+ A + + G P
Sbjct: 135 CLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTP 194
Query: 170 NAITYTTIMKCCFR----NRKYKLGLEILSAMKRKGYTFDG--FGYCTVIAAFVKIGRLK 223
NA+TY T++K + N KL E+L+ + G Y +I K+GR
Sbjct: 195 NAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRED 254
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
EA + E+M G+ D++SY+TLI+ +C GK + + L DEM QG + D T ++LI
Sbjct: 255 EAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLI 314
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
D LCK G + A+ LE M + G NL YN ++D G ++ A +F SM K
Sbjct: 315 DTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLE 374
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D +Y+++++ CK ++ A L L+ G + ++ GL G +AKK+
Sbjct: 375 PDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKL 434
Query: 400 QSKIRMAKIS 409
++ +S
Sbjct: 435 FGVMKTYGVS 444
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 188/393 (47%), Gaps = 11/393 (2%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
MR I P + ++N L+ G + + S L +EM G+ PD+++ + L +CL + +
Sbjct: 83 MRSHPIPP-ISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNR 141
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
EA ++ P T+ ++ GLC A R+F +QK G P VTY
Sbjct: 142 VSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGT 201
Query: 142 LIKGLCKAGRLRTARWILKE-LGDSGH-----APNAITYTTIMKCCFRNRKYKLGLEILS 195
LIKGLC+ G + A + KE L D+ P ITY+ I+ + + E+
Sbjct: 202 LIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFE 261
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
MK +G D Y T+I F G+ ++ ++MV GVQ D+V+++ LI+ CKEG
Sbjct: 262 EMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEG 321
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
K+ A LL+ M ++G + T+ LIDG C G++ AR M G + + +Y
Sbjct: 322 KVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYT 381
Query: 316 CIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
+++ K K+ A+N++ M + + TY +++ L + ++ A KL
Sbjct: 382 TLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTY 441
Query: 372 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
GV +DGL + C EA ++ ++++
Sbjct: 442 GVSANSQIYGIFLDGLCKNDCLFEAMELFNELK 474
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 176/359 (49%), Gaps = 8/359 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I + C+ + L+ M +G PD T+NSLI G R + + + DL D+M G
Sbjct: 17 VIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRG 76
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
DV SY +L+ + G+ DEA +F +M D+ + ++ GLCK + L
Sbjct: 77 FAQDVVSYAALIEGFCETGRIDEAVELFGEMDQPDM----HMYAALVKGLCKAGRGEEGL 132
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M R +++ G+ P Y ++ C + + A +L+E+ + G AP +T T ++
Sbjct: 133 LMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAY 192
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + L +L MK +G + + Y ++ F G++ +A + +M GV D
Sbjct: 193 CKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDA 252
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN LI C +G +E+A+ LL ME G D+YT+ LI+ LCK G A +
Sbjct: 253 VTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDS 312
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ G N +N +++ L K GK+D A E M D++TYSS + +LCK K
Sbjct: 313 LETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMK 371
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 174/344 (50%), Gaps = 8/344 (2%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
TYN++I R + L+ +L L M+ G PD +++NSL+ + + D A +F M
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
++ ++ G C+ D A+ +F + + P++ Y L+KGLCKAGR
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRG 128
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
+L+ + + G P+ Y ++ RK K E+L M KG V
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I A+ K GR+ +A +E M G + ++ +YN L+ +C EGK+ A LL++M G
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
D T+ +LI G C G+I+ A L M G ++ YN +++ L KDG+ D A +
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 308
Query: 333 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
+F+S+E + ++ T++S+++ LCK+ ++ A K L + +G
Sbjct: 309 LFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAG 352
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 198/420 (47%), Gaps = 23/420 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ +C +LN+MR G++PD VTYN LI G + + + LL M G
Sbjct: 223 LVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDG 282
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D ++YN+L++ L + G+ D+A +F + + P TFN ++NGLCK+ D A
Sbjct: 283 LIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAW 342
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P+ TY+ I+ LCK + + E+ P+ + YT ++
Sbjct: 343 KFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKL 402
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R Y L M G D Y T + A+ GRL EA + + +M +GV +D
Sbjct: 403 LKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDT 462
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK------------A 289
++YNTL++ + G+ + A +L +M +++T+ IL+ L + A
Sbjct: 463 MAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPA 522
Query: 290 GNIKGARLH-----LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT 344
G K L + M K F N Y+ I++ +DG+ + A ++ M+ +DS +
Sbjct: 523 GVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMK-EDSIS 581
Query: 345 -----YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
Y+++V CK+KR A L+ S ++ G + + ++ GL G +AK+I
Sbjct: 582 LNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEI 641
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 171/360 (47%), Gaps = 6/360 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D C +L M E G++P VVT ++I + +S +L +L+ M G
Sbjct: 153 VVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 212
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+VW+YN+L+ GK +A + M +CG + P T+N+++ G C + + ++A
Sbjct: 213 CKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCG-VNPDAVTYNLLIRGQCIDGHIESA 271
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+ R ++ G + + TYN LI LCK GR A + L G PNA+T+ +++
Sbjct: 272 FRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLING 331
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K + + L M G T D + Y + I K+ +E ++ +M+ V+
Sbjct: 332 LCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPS 391
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+Y +I+ KE EM G D T+T + C G + A L
Sbjct: 392 TVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLM 451
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
M+K G + AYN ++D G+ DHA+++ + M V + FTY ++ +L + +
Sbjct: 452 EMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMR 511
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 155/392 (39%), Gaps = 90/392 (22%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+A C+ D ++ + + GI P+ VT+NSLI G ++ + + L++M+ G
Sbjct: 293 LINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAG 352
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD ++Y+S + L ++ E +M+ D+ P T + I+++ L K R
Sbjct: 353 CTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVA 412
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL------------------- 162
R + + G P++VTY ++ C GRL A +L E+
Sbjct: 413 RTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGH 472
Query: 163 ---GDSGHA-------------PNAITYTTIMKCCFRNRKYKLGLEILSA---------- 196
G + HA PN TY +++ R R + L + A
Sbjct: 473 ASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTD 532
Query: 197 -------MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
MK+ + + Y +++ F + GR +EAT + M D + L+ Y L+
Sbjct: 533 VFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVT 592
Query: 250 LYCKEGKLEAAYLLLDEMEKQGF-----------------------------------EC 274
+CK + A++L+ M + GF
Sbjct: 593 CFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSP 652
Query: 275 DKYTHTILIDGLCKAGNIKGAR---LHLEYMN 303
D+ ++IDGL K G+ +R + LE MN
Sbjct: 653 DEIVWKVIIDGLIKKGHSDISREMIIMLERMN 684
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 113/241 (46%), Gaps = 8/241 (3%)
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
TY +++ R L LS M R G+ D + + ++I + + ++ A D ++M
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
G D+VSY LI +C+ G+++ A L EM++ D + + L+ GLCKAG
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQP----DMHMYAALVKGLCKAGRG 128
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSM 348
+ L L M ++G+ + AY +VD + K A + + M K T +++
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
++ CK R+ A ++L G + A+V G + G +A + +K+R+ +
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248
Query: 409 S 409
+
Sbjct: 249 N 249
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 194/406 (47%), Gaps = 39/406 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ F+ + +L +M + G +PD+ Y +++ G + L + ++LD M G
Sbjct: 266 LIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYG 325
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V YN+++ L + ++A + +M D TFNI+++ C+N +
Sbjct: 326 LKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVI 385
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +HG VP+++TY +I G CK G + A +LK + G PN I+YT ++K
Sbjct: 386 ELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLK-- 443
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
G C+ R +A D M QM+ G +
Sbjct: 444 --------------------------GLCSA-------ERWVDAEDLMSQMIEQGCSPNP 470
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++NT+IN CK+G +E A LL +M G D +++ +IDGL KAG A L
Sbjct: 471 VTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNV 530
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G N Y+ I L K+G+I+ I +F++++ D+ Y++++ +LCK
Sbjct: 531 MVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGG 590
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A + L + SG +S ++ GL G +EA+++ +++
Sbjct: 591 TDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTEL 636
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 158/349 (45%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D C+ + + IL+RM G+ P+VV YN+++ G + +LL EM +
Sbjct: 301 VLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDND 360
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P D ++N L+ Q G + + M+ P T+ ++NG CK D A+
Sbjct: 361 CPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAV 420
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P ++Y I++KGLC A R A ++ ++ + G +PN +T+ T++
Sbjct: 421 MLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFL 480
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + +E+L M G + D Y TVI K G+ EA + + MV G+ +
Sbjct: 481 CKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNT 540
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ Y+++ + KEG++ + D ++ D + +I LCK G A L Y
Sbjct: 541 IIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAY 600
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVH 350
M G N Y ++ L +G + A + + K + M H
Sbjct: 601 MVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHFMKH 649
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 171/355 (48%), Gaps = 9/355 (2%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD--- 83
+ P+ TY ++ ++ +L +LDEM G P Y+ ++ G
Sbjct: 111 VPPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFR 170
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLC-KNRYTDNALRMFRGLQ-KHGFVPELVTYNI 141
A RV QD+ N++LN +C + D ALR+ R L G P++V+YN
Sbjct: 171 SAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNA 230
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
++KGLC A R + +++E+ G PN +T+ T++ RN ++ ++L+ M G
Sbjct: 231 VLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHG 290
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
T D Y TV+ K G L+ A + +++M + G++ ++V YNT++ C + E A
Sbjct: 291 CTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAE 350
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
LL EM D T IL+D C+ G + LE M + G ++ Y +++
Sbjct: 351 ELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGF 410
Query: 322 GKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
K+G ID A+ + +SM ++ +Y+ ++ LC A+R A L+ ++ G
Sbjct: 411 CKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQG 465
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 170/401 (42%), Gaps = 68/401 (16%)
Query: 1 MLIDAYC-QFVSFDAGYTILNRMREA-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
++++A C Q S D +L + + G PDVV+YN+++ G DL++EM+
Sbjct: 193 LVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMV 252
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
+G PP+V TFN ++ LC+N +
Sbjct: 253 RVGCPPNV-----------------------------------VTFNTLIGYLCRNGLFE 277
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
++ + HG P++ Y ++ G+CK G L A IL + G PN + Y T++
Sbjct: 278 RVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVL 337
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
K +++ E+L+ M D + ++ F + G + + +EQM+ G
Sbjct: 338 KGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCV 397
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D+++Y T+IN +CKEG ++ A +LL M G + ++TI++ GLC A A
Sbjct: 398 PDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDL 457
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRL 358
+ M + G N T++++++ LCK +
Sbjct: 458 MSQMIEQGCSPN-------------------------------PVTFNTVINFLCKKGLV 486
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
A +LL L +G + V+DGL +G EA ++
Sbjct: 487 EQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALEL 527
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 143/379 (37%), Gaps = 82/379 (21%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
+N M++G C+ +A R+ + P TY +++ LC GR+ A +L E+
Sbjct: 86 YNAMVSGYCRAGQLASARRLAASVP---VPPNAYTYFPVVRALCARGRIADALSVLDEMR 142
Query: 164 DSGHAPNAITYTTIMK-CCFR--NRKYKLGLEILSAMKRKGYTFD--------------- 205
G AP Y I++ C R ++ + +L + +G D
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202
Query: 206 ---------------GFG-------YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
FG Y V+ R D ME+MV G ++V+
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
+NTLI C+ G E + +L +M G D + ++DG+CK G+++ A L+ M
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322
Query: 304 KIGFDSNLEAYNCI-----------------------------------VDRLGKDGKID 328
G N+ YN + VD ++G +
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVY 382
Query: 329 HAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 384
I + E M V D TY+++++ CK + A LL S G R + V+
Sbjct: 383 RVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVL 442
Query: 385 DGLRHSGCRREAKKIQSKI 403
GL + +A+ + S++
Sbjct: 443 KGLCSAERWVDAEDLMSQM 461
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 198/407 (48%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C +++RM E P+VVT N+LI G ++ +L L+D M++ G
Sbjct: 145 LINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYG 204
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ +Y +++ + + G A +F+ M + ++I+++ LCK+ D+AL
Sbjct: 205 CEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDAL 264
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ G ++V Y+ +I GLC GR +L+E+ PN +T++ ++
Sbjct: 265 SLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVF 324
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K E+ + M +G D Y ++I F K RL EA ++ MV+ G + +I
Sbjct: 325 VKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNI 384
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y+ LIN YCK +++ L E+ +G D T+ L+ G C++G + A+ +
Sbjct: 385 VTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQE 444
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKR 357
M G ++ Y ++D L +G++ A+ +FE M+ Y+ ++H +C A +
Sbjct: 445 MVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASK 504
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A L S GV+ ++ GL G EA + K++
Sbjct: 505 VDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMK 551
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 197/412 (47%), Gaps = 39/412 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ +C+ ++++ R + G P+ +T+++LI G +S ++ L+D M+EM
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+V + N+L++ L G+ EA + M+ T+ +LN +CK+ T A
Sbjct: 169 KYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALA 228
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +FR +++ +V Y+I+I LCK G L A
Sbjct: 229 LDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDA------------------------- 263
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
L + + M+ KG D Y ++I GR + + +M+ + +
Sbjct: 264 ----------LSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPN 313
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+++ LI+++ KEGKL A L +EM +G D T++ LIDG CK + A L+
Sbjct: 314 VVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLD 373
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M G + N+ Y+ +++ K ++D+ + +F + V D+ TY+++V C++
Sbjct: 374 LMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSG 433
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+L A +L + GV ++DGL +G ++A +I K++ +++
Sbjct: 434 KLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRM 485
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 168/341 (49%), Gaps = 2/341 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID+ C+ + D ++ N M GI DVV Y+S+I G + +L EM+
Sbjct: 249 IVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGR 308
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P+V ++++L+ + GK EA ++ +M+ + P T T++ +++G CK A
Sbjct: 309 NIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEA 368
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+M + G P +VTY+ILI CKA R+ + E+ G + +TY T+++
Sbjct: 369 NQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQG 428
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K + E+ M +G Y ++ G L++A + E+M + L
Sbjct: 429 FCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILG 488
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I YN +I+ C K++ A+ L + +G + D T+ ++I GLCK G++ A +
Sbjct: 489 IGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFR 548
Query: 301 YMNKIGFDSNLEAYNCIV-DRLGKDGKIDHAINVFESMEVK 340
M + G + YN ++ LG G I ++ + E M+++
Sbjct: 549 KMKEDGCAPSDCTYNILIRAHLGGSGVI-SSVELIEEMKMR 588
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 148/318 (46%), Gaps = 37/318 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C +D G +L M I P+VVT+++LI + L + +L +EM+ G
Sbjct: 285 IIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARG 344
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD +Y+SL+ + + EAN++ M+ P T++I++N CK + DN +
Sbjct: 345 IAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGM 404
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+F + G V + VTYN L++G C++G+L A+ + +E+ G P+ +TY ++
Sbjct: 405 RLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGL 464
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFG-YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
N + + LEI M++ G G Y +I ++ +A + GV+ D
Sbjct: 465 CDNGELQKALEIFEKMQKSRMIL-GIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPD 523
Query: 241 IVSYNTLINLYCKEGKLEAAYLL-----------------------------------LD 265
+++YN +I CK+G L A +L ++
Sbjct: 524 VLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIE 583
Query: 266 EMEKQGFECDKYTHTILI 283
EM+ +GF D T +++
Sbjct: 584 EMKMRGFAADASTIKMVV 601
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 115/222 (51%), Gaps = 1/222 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI++YC+ D G + + G+ D VTYN+L+ G ++ L+ + +L EM+
Sbjct: 389 ILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSR 448
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+PP V +Y L+ L G+ +A +F+ M + +NI+++G+C D+A
Sbjct: 449 GVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDA 508
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F L G P+++TYN++I GLCK G L A + +++ + G AP+ TY +++
Sbjct: 509 WSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRA 568
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
+E++ MK +G+ D ++ + GRL
Sbjct: 569 HLGGSGVISSVELIEEMKMRGFAADA-STIKMVVVMLSDGRL 609
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 141/291 (48%), Gaps = 4/291 (1%)
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
+ A+ +F + + +P L+ ++ L + + KE+ +G N T
Sbjct: 50 VNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNI 109
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ C R RK ++ + G+ + + T+I F GR+ EA +++MV
Sbjct: 110 MINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMK 169
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
+ ++V+ NTLIN C +G++ A +L+D M K G E ++ T+ +++ +CK+GN A
Sbjct: 170 YRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALAL 229
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
M + +++ Y+ ++D L KDG +D A+++F ME+K D YSS++ L
Sbjct: 230 DLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGL 289
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
C R +K+L + + A++D G EAK++ +++
Sbjct: 290 CNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEM 340
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 191/419 (45%), Gaps = 40/419 (9%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + M + G PDVVT+NS+I + + + LL +M++ G+PP+ +Y S++H
Sbjct: 138 LYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYS 197
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
LG+ +EA ++F++M L P ++N ++ LCK+ + A +F + G P +V
Sbjct: 198 TLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIV 257
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY IL+ G G + G N + +T ++ + + ILS M
Sbjct: 258 TYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEM 317
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY------ 251
+ +G + D F Y T+I+A ++GRL +A D QM+ GVQ + V Y++LI +
Sbjct: 318 QGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDL 377
Query: 252 ------------------------------CKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
CKEG++ A+ + D ++ G D
Sbjct: 378 VKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNT 437
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 341
LIDG C G + A L+ M G + YN +V+ K G+ID +N+F M K
Sbjct: 438 LIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKK 497
Query: 342 ----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ TY+ ++ L +A R +A K+L + G + ++ GL + C EA
Sbjct: 498 IKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEA 556
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 170/378 (44%), Gaps = 7/378 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P + TY ++ G R L +L G+ D + N+++ CL + D+A +V
Sbjct: 6 PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65
Query: 89 -FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV--PELVTYNILIKG 145
+ M P ++ I+L LC + + AL + R + K V P++VTYN +I G
Sbjct: 66 LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
K G++ A + E+ G P+ +T+ +I+ + R +L M G +
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y ++I + +GR +EAT +M G+ DIVS+N+ ++ CK G+ + A +
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M +G + T+ IL+ G G M G +N + ++D K G
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+D A+ + M+ + D FTYS+++ LC+ RL A + +GV+
Sbjct: 306 MMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYH 365
Query: 382 AVVDGLRHSGCRREAKKI 399
+++ G G +AK++
Sbjct: 366 SLIQGFCTHGDLVKAKEL 383
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 160/339 (47%), Gaps = 1/339 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDAY + D IL+ M+ G+SPDV TY++LI+ R L+ ++D ++M+
Sbjct: 296 ILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGT 355
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANR-VFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G+ P+ Y+SL+ G +A V++ M G P A FN +++ +CK +
Sbjct: 356 GVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMD 415
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +F ++ G +++ +N LI G C G + A +L + +G P+ TY T++
Sbjct: 416 AHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVN 475
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
F++ + GL + M K Y ++ + GR A + +M+ G +
Sbjct: 476 GYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTV 535
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ +YN ++ C+ + A ++ ++ + + T +I+ + + A+
Sbjct: 536 SLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLF 595
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
++ G N Y ++ L K+G ++ A N+F SME
Sbjct: 596 SAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSME 634
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 172/411 (41%), Gaps = 40/411 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+D+ C+ I M G P++VTY L+ G + + + M G
Sbjct: 227 FMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDG 286
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I + + L+ + G DEA + +M L+P T++ +++ LC+ +A+
Sbjct: 287 IVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAV 346
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG-HAPNAITYTTIMKC 180
F + G P V Y+ LI+G C G L A+ ++ E+ ++G PN + +I+
Sbjct: 347 DKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHS 406
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + I +K G D + T+I + +G + +A ++ M++ G+ D
Sbjct: 407 ICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPD 466
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+YNTL+N Y K G+++ L EM + + T+ I++DGL +AG A+ L
Sbjct: 467 TFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLH 526
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----------------------- 337
M G +L YN I+ L ++ D AI +F+ +
Sbjct: 527 EMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQ 586
Query: 338 ---EVKDSF-------------TYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
E KD F TY M+ NL K + A + S KSG
Sbjct: 587 RREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSG 637
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 113/231 (48%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC +++L+ M AGI PD TYN+L+ G ++ + L+L EM +
Sbjct: 438 LIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKK 497
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P +YN ++ LF+ G+ A ++ +MI T T+NI+L GLC+N TD A+
Sbjct: 498 IKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAI 557
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
MF+ L + T N +I + R A+ + + DSG PNA TY +++
Sbjct: 558 VMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNL 617
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
+ + + S+M++ G I ++ G + +A +YM ++
Sbjct: 618 LKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKAGNYMSKV 668
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 153/342 (44%), Gaps = 5/342 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI A C+ N+M G+ P+ V Y+SLI G + L + +L+ EM+ G
Sbjct: 332 LISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNG 391
Query: 62 IP-PDVWSYNSLMHCLFQLGKPDEANRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYTD 118
IP P++ +NS++H + + G+ +A+ +F D++ G+ + FN +++G C
Sbjct: 392 IPRPNIAFFNSIVHSICKEGRVMDAHHIF-DLVKDIGERSDII-MFNTLIDGYCLVGEMG 449
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A + + G P+ TYN L+ G K+GR+ + +E+ D P +TY I+
Sbjct: 450 KAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIIL 509
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
FR + ++L M G T Y ++ + EA +++ T V+
Sbjct: 510 DGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVK 569
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+I + NT+IN + E A L + G + T+ I+I L K G+++ A
Sbjct: 570 FNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNM 629
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
M K G N + L + G+I A N ++ K
Sbjct: 630 FSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKAGNYMSKVDGK 671
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 199/426 (46%), Gaps = 25/426 (5%)
Query: 3 IDAYCQ--FVSFDAGY-TILNRMREAGISPDVVTYNSLIAGATRN------------SLL 47
+D++C+ FV + T + + E P+V AG + LL
Sbjct: 99 LDSFCRKFFVKLSPNFVTFVLQSVELREKPEVAVRFFFWAGKQKKYVHKIECHVSLIELL 158
Query: 48 SCSLDLLD------EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 101
+ S DL+ E+ + G+ + NSL+ LG +E V++ M + P
Sbjct: 159 TFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSL 218
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
T+N ++NGL + + ++A ++F + VP+ VTYNI+IKG CKAG+L+ A ++
Sbjct: 219 YTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRD 278
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ P+ ITY T+++ C+ R + L + M+ +G Y VI K +
Sbjct: 279 MEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRK 338
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
EA E M G + ++ Y LI+ Y K G +E A L + M+ +GFE D T+++
Sbjct: 339 CMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSV 398
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 340
L++GLCK+G + ++ G N Y ++D LGK G+I+ A N+FE M K
Sbjct: 399 LVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKG 458
Query: 341 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
DS+ Y++++ L K ++ A L + G ++DGL EA
Sbjct: 459 CARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAI 518
Query: 398 KIQSKI 403
K K+
Sbjct: 519 KFWDKM 524
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 169/357 (47%), Gaps = 4/357 (1%)
Query: 35 NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 94
NSLI L+ L + M E GI P +++YN L++ L + A +VF+ M
Sbjct: 187 NSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDG 246
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
G + P T T+NIM+ G CK A+ FR ++ P+ +TY LI+ T
Sbjct: 247 GKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDT 306
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
+ E+ + G +Y+ ++ + RK + M +KG + Y +I
Sbjct: 307 CLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALID 366
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
++ K G ++EA E+M +G + D V+Y+ L+N CK G+L+ L D +G
Sbjct: 367 SYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAI 426
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
+ + LIDGL KAG I+ A E M++ G + YN I+D L K GKID A+ +F
Sbjct: 427 NAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALF 486
Query: 335 ESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
ME + +T++ ++ L K + A K + G+ ++ +A+ GL
Sbjct: 487 GRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGL 543
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 178/394 (45%), Gaps = 3/394 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L++ + ++ + M I PD VTYN +I G + L +++ +M
Sbjct: 223 FLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMK 282
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD +Y +L+ + D ++ +M L ++++++ GLCK R A
Sbjct: 283 NVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEA 342
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + + G + Y LI K G + A + + + + G P+A+TY+ ++
Sbjct: 343 YAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNG 402
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ + G+E+ + KG + Y ++I K GR+++A + E+M G D
Sbjct: 403 LCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARD 462
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
YN +I+ K GK++ A L ME++G + YT TILIDGL K + A +
Sbjct: 463 SYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWD 522
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE---SMEVKDSFTYSSMVHNLCKAKR 357
M G + ++ + L GK+ A + + M + + M++ LCKA+R
Sbjct: 523 KMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIPETAFEDMINTLCKAQR 582
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ A KL + G I + +++ LR +G
Sbjct: 583 IKEACKLADGIVDRGREIPGRIRTVLINALRKAG 616
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 93/216 (43%), Gaps = 4/216 (1%)
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ +K +G ++I +F +G ++E +M +G+ + +YN L+N
Sbjct: 170 VFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLV 229
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
+E+A + + M+ D T+ I+I G CKAG ++ A M +
Sbjct: 230 NSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKI 289
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 368
Y ++ + D ++++ ME + +YS ++ LCK ++ A + +
Sbjct: 290 TYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETM 349
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ G R + A++D +G EA ++ +++
Sbjct: 350 NQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMK 385
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 168/333 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ C D Y I+ M +G P+VV Y +LI +NS ++ +L EM E G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD++ YNSL+ L + + DEA +M+ L P T+ ++G + +A
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +++ G +P V LI CK G++ A + + D G +A TYT +M
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+N K EI M+ KG D F Y +I F K+G +++A+ ++MV +G+ ++
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ YN L+ +C+ G++E A LLDEM +G + T+ +IDG CK+G++ A +
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
M G + Y +VD + ++ AI +F
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 188/403 (46%), Gaps = 4/403 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ + ++L M G+S D TY+ LI G + + L+ EM+
Sbjct: 282 VLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSH 341
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI + Y+ + + + G ++A +F MI L P + ++ G C+ +
Sbjct: 342 GINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQG 401
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++K V TY ++KG+C +G L A I+KE+ SG PN + YTT++K
Sbjct: 402 YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKT 461
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+N ++ + +L MK +G D F Y ++I K R+ EA ++ +MV +G++ +
Sbjct: 462 FLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN 521
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y I+ Y + + +A + EM + G +K T LI+ CK G + A
Sbjct: 522 AFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYR 581
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G + + Y +++ L K+ K+D A +F M K D F+Y +++ K
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ AS + ++ G+ ++ G SG +AK++
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 171/364 (46%), Gaps = 4/364 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC+ + GY +L M++ I TY +++ G + L + +++ EM+ G
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V Y +L+ Q + +A RV ++M + P +N ++ GL K + D A
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++G P TY I G +A +A +KE+ + G PN + T ++
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K +M +G D Y ++ K ++ +A + +M G+ D+
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
SY LIN + K G ++ A + DEM ++G + + +L+ G C++G I+ A+ L+
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M+ G N Y I+D K G + A +F+ M++K DSF Y+++V C+
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 358 LPSA 361
+ A
Sbjct: 748 VERA 751
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 186/419 (44%), Gaps = 50/419 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + Q F +L M+E GI+PD+ YNSLI G ++ + + L EM+E G
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-ICGDLT--------------------PC 100
+ P+ ++Y + + + + A++ ++M CG L C
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577
Query: 101 TA--------------TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+A T+ +++NGL KN D+A +FR ++ G P++ +Y +LI G
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
K G ++ A I E+ + G PN I Y ++ R+ + + E+L M KG +
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
YCT+I + K G L EA ++M G+ D Y TL++ C+ +E A +
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG- 756
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI---GFD----SNLEAYNCIVD 319
K+G LI+ + K G L E +N++ FD N YN ++D
Sbjct: 757 TNKKGCASSTAPFNALINWVFKFGK---TELKTEVLNRLMDGSFDRFGKPNDVTYNIMID 813
Query: 320 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
L K+G ++ A +F M+ + TY+S+++ K R + + +G+
Sbjct: 814 YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 184/442 (41%), Gaps = 44/442 (9%)
Query: 7 CQFVSFDAGYTILNRMRE-------------------AGISPDVVTYNSLIAGATRNSLL 47
C F SF+ +++ RM E G S D V + L G +
Sbjct: 108 CNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYI 167
Query: 48 SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 107
++ + + + + P + L+ L + + D V++ M+ ++ T++++
Sbjct: 168 EEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHML 227
Query: 108 LNGLCK---------------------NRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ C+ D AL++ + G VP TY++LI GL
Sbjct: 228 IIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGL 287
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK RL A+ +L E+ G + + TY+ ++ + R ++ M G
Sbjct: 288 CKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKP 347
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ Y I K G +++A + M+ G+ +Y +LI YC+E + Y LL E
Sbjct: 348 YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVE 407
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+K+ YT+ ++ G+C +G++ GA ++ M G N+ Y ++ ++ +
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467
Query: 327 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
A+ V + M+ D F Y+S++ L KAKR+ A L+ +++G++ A
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527
Query: 383 VVDGLRHSGCRREAKKIQSKIR 404
+ G + A K ++R
Sbjct: 528 FISGYIEASEFASADKYVKEMR 549
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 147/316 (46%), Gaps = 10/316 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ + + + +I + M E G++P+V+ YN L+ G R+ + + +LLDEM
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ +Y +++ + G EA R+F +M L P + + +++G C+ + A
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH----APNAITYTT 176
+ +F G K G +N LI + K G+ +L L D PN +TY
Sbjct: 752 ITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ + + E+ M+ Y +++ + K+GR E ++ + G
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ-----GFECDKYTHTILIDGLCKAGN 291
++ D + Y+ +IN + KEG A +L+D+M + G + T L+ G K G
Sbjct: 871 IEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGE 930
Query: 292 IKGARLHLEYMNKIGF 307
++ A +E M ++ +
Sbjct: 931 MEVAEKVMENMVRLQY 946
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 121/295 (41%), Gaps = 43/295 (14%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
ML+ +C+ + +L+ M G+ P+ VTY ++I G ++ L+ + L DEM
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726
Query: 61 GIPPDVWSY----------------------------------NSLMHCLFQLGKPDEAN 86
G+ PD + Y N+L++ +F+ GK +
Sbjct: 727 GLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKT 786
Query: 87 RVFQDMICGDL----TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
V ++ G P T+NIM++ LCK + A +F +Q +P ++TY L
Sbjct: 787 EVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
+ G K GR + E +G P+ I Y+ I+ + L ++ M K
Sbjct: 847 LNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA 906
Query: 203 TFDG----FGYC-TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
DG C +++ F K+G ++ A ME MV D + LIN C
Sbjct: 907 VDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 174/355 (49%), Gaps = 4/355 (1%)
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
E PPD +SYN ++ L++ GK +A +VF +M+ + P T+N M++G K +
Sbjct: 9 EGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLE 68
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
R+ + G P +VTYN+L+ GLC+AGR+ R ++ E+ P+ TY+ +
Sbjct: 69 AGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILF 128
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
R + + L + + +KG + ++ K G++ +A +E +V G+
Sbjct: 129 DGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLV 188
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
V YNTLIN YC+ L A+ + ++M+ + D T+ LI+GLCK + A
Sbjct: 189 PTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDL 248
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
+ M K G D ++E +N ++D G G+++ V M+ K D ++ S+V CK
Sbjct: 249 VMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCK 308
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
++P A +L + V +++D SG +A + K++ + +S
Sbjct: 309 NGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVS 363
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 204/445 (45%), Gaps = 41/445 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID + + +AG+ + ++M G P++VTYN L++G R + + L+DEM
Sbjct: 57 MIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHS 116
Query: 62 IPPDVWSYNSL------------MHCLF-----------------------QLGKPDEAN 86
+ PD ++Y+ L M LF + GK +A
Sbjct: 117 MFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAE 176
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+V + ++ L P T +N ++NG C+ R A +F ++ P+ +TYN LI GL
Sbjct: 177 QVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGL 236
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK + A ++ E+ SG P+ T+ T++ + + +LS M++KG D
Sbjct: 237 CKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDV 296
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ +V+ AF K G++ EA ++ M+ V + YN++I+ Y + G E A+LL+++
Sbjct: 297 ISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEK 356
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+ G T+ +L+ GLC++ I A + + G ++ +YN I+ G
Sbjct: 357 MKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGD 416
Query: 327 IDHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
D A+ + + M ++ + TY ++V L A R+ L L V S
Sbjct: 417 TDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGI 476
Query: 383 VVDGLRHSGCRREAKKIQSKIRMAK 407
+VD + C ++K K M++
Sbjct: 477 MVDA--YVRCENDSKVASLKKEMSE 499
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 177/361 (49%), Gaps = 4/361 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + M + G+ P+ +TYN++I G + L L D+ML G P++ +YN L+ L
Sbjct: 38 VFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLC 97
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G+ DE + +M + P T++I+ +GL + + L +F K G +
Sbjct: 98 RAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAY 157
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T +IL+ GLCK G++ A +L+ L +G P + Y T++ + R + I M
Sbjct: 158 TCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM 217
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K + D Y +I K+ + +A D + +M GV + ++NTLI+ Y G+L
Sbjct: 218 KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQL 277
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
E + +L +M+++G + D + ++ CK G I A L+ M N + YN I
Sbjct: 278 EKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSI 337
Query: 318 VDRLGKDGKIDHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+D + G + A + E M+ V S TY+ ++ LC++ ++ A +L+ + G+
Sbjct: 338 IDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGL 397
Query: 374 R 374
R
Sbjct: 398 R 398
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 165/383 (43%), Gaps = 35/383 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C+ D +++ M + PD TY+ L G TR L L E L+
Sbjct: 91 VLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKK 150
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA------------------ 102
G+ ++ + L++ L + GK +A +V + ++ L P T
Sbjct: 151 GVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGA 210
Query: 103 -----------------TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
T+N ++NGLCK A + ++K G P + T+N LI
Sbjct: 211 FCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDA 270
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
AG+L +L ++ G + I++ +++K +N K + IL M K +
Sbjct: 271 YGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPN 330
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y ++I A+++ G ++A +E+M GV IV+YN L+ C+ +++ A L+
Sbjct: 331 AQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIY 390
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+ QG D ++ +I C G+ A L+ MNK G L Y+ +V L G
Sbjct: 391 TLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAG 450
Query: 326 KIDHAINVFESMEVKDSFTYSSM 348
++ +++ M K+ SS+
Sbjct: 451 RVHDMECLYQQMLHKNVEPSSSI 473
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 147/330 (44%), Gaps = 3/330 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ C+ +L + G+ P V YN+LI G + L + + ++M
Sbjct: 161 ILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR 220
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PD +YN+L++ L +L +A + +M + P TFN +++ +
Sbjct: 221 HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC 280
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +Q+ G +++++ ++K CK G++ A IL ++ APNA Y +I+
Sbjct: 281 FTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDA 340
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + ++ MK G + Y ++ + ++ EA + + + G++ D
Sbjct: 341 YIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPD 400
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+VSYNT+I+ C +G + A LL EM K G T+ L+ L AG + +
Sbjct: 401 VVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQ 460
Query: 301 YMNKIGFDSNLEAYNCIVD---RLGKDGKI 327
M + + Y +VD R D K+
Sbjct: 461 QMLHKNVEPSSSIYGIMVDAYVRCENDSKV 490
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 103/239 (43%), Gaps = 35/239 (14%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LIDAY + +T+L+ M++ GI DV+++ S++ +N + ++ +LD+M+
Sbjct: 267 LIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKD 326
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY----- 116
+ P+ YNS++ + G ++A + + M ++ T+N++L GLC++
Sbjct: 327 VAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAE 386
Query: 117 ------------------------------TDNALRMFRGLQKHGFVPELVTYNILIKGL 146
TD AL + + + K+G P L TY+ L+ L
Sbjct: 387 ELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSAL 446
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
AGR+ + +++ P++ Y ++ R + M KG FD
Sbjct: 447 ASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 505
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 185/342 (54%), Gaps = 17/342 (4%)
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMI----CGDLTPCTATFNIMLNGLCKNRYTDNA 120
++ S N+L L + G+ +E R + M+ D+ PCT+ ++ G CK T A
Sbjct: 84 EIESNNNLSK-LVRNGELEEGFRFLESMVYRGDIPDIIPCTS----LIRGFCKIGKTRKA 138
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+ ++ G VP+++TYN+LI G+C GR A +L ++ G +P+ +T+ ++
Sbjct: 139 TRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILIN- 197
Query: 181 CFRNRKYKLG--LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
F RK LG +++L M + G T + Y ++ F K +++ A +Y+ +M + G
Sbjct: 198 -FLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCY 256
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
DIV+YNTL+ CK+GK++AA LL+++ +G T+ +IDGL K G A
Sbjct: 257 PDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKL 316
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCK 354
L+ M G ++ Y+ +V L ++GK+D AI F +EV ++ TY++++ LCK
Sbjct: 317 LDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCK 376
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
A++ A L ++ G + +++ +++GL + G +EA
Sbjct: 377 ARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEA 418
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 166/336 (49%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
+ G+ L M G PD++ SLI G + + +++ + + G PDV +YN
Sbjct: 100 LEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNV 159
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
L+ + G+ +A ++ DM+ +P TFNI++N LC+ A+ + + KHG
Sbjct: 160 LISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHG 219
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
P ++YN L+ G CK ++ A L ++ G P+ +TY T++ ++ K +
Sbjct: 220 CTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAV 279
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
E+L+ + KG + Y TVI K+G+ +A +++M G++ DI++Y++L+
Sbjct: 280 ELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGL 339
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
+EGK++ A ++E G + + T+ ++ GLCKA A L YM + G
Sbjct: 340 SREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTE 399
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS 347
+Y +++ L +G A+ + + ++ SS
Sbjct: 400 ASYTILIEGLAYEGLAKEALELLNELCLRGVVKKSS 435
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 153/304 (50%), Gaps = 3/304 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ I+ + ++G PDV+TYN LI+G + LL +M+ G
Sbjct: 125 LIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRG 184
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V ++N L++ L + G A V + M TP + ++N +L+G CK + + A+
Sbjct: 185 CSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAI 244
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ G P++VTYN L+ LCK G++ A +L +L G +P ITY T++
Sbjct: 245 EYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGL 304
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K ++L M+ KG D Y +++ + G++ EA + + GV+ +
Sbjct: 305 SKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNA 364
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN ++ CK K + A L M ++G + + ++TILI+GL G K A LE
Sbjct: 365 ITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEA---LEL 421
Query: 302 MNKI 305
+N++
Sbjct: 422 LNEL 425
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 122/267 (45%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C + +L M G SP VVT+N LI R LL ++D+L++M +
Sbjct: 159 VLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKH 218
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ SYN L+H + K + A M P T+N +L LCK+ D A
Sbjct: 219 GCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAA 278
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + L G P L+TYN +I GL K G+ A +L E+ G P+ ITY++++
Sbjct: 279 VELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGG 338
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R K ++ ++ G + Y ++ K + A D++ MV G +
Sbjct: 339 LSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPT 398
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEM 267
SY LI EG + A LL+E+
Sbjct: 399 EASYTILIEGLAYEGLAKEALELLNEL 425
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 118/237 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ +L +M + G +P+ ++YN L+ G + + +++ L +M
Sbjct: 194 ILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSR 253
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN+L+ L + GK D A + + +P T+N +++GL K TD A
Sbjct: 254 GCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQA 313
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ ++ G P+++TY+ L+ GL + G++ A +L G PNAITY IM
Sbjct: 314 AKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLG 373
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ RK ++ L+ M ++G Y +I G KEA + + ++ GV
Sbjct: 374 LCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGV 430
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 130/298 (43%), Gaps = 39/298 (13%)
Query: 105 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 164
N L+ L +N + R + G +P+++ LI+G CK G+ R A I++ + D
Sbjct: 88 NNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIED 147
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
SG P+ ITY ++ G C+ GR +
Sbjct: 148 SGAVPDVITYNVLIS----------------------------GMCST-------GRWMD 172
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A + MV G +V++N LIN C++G L A +L++M K G + ++ L+
Sbjct: 173 AEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLH 232
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-- 342
G CK ++ A +L M G ++ YN ++ L KDGK+D A+ + + K
Sbjct: 233 GFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSP 292
Query: 343 --FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
TY++++ L K + A+KLL G++ ++V GL G EA K
Sbjct: 293 VLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIK 350
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 110/226 (48%), Gaps = 4/226 (1%)
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
RN + + G L +M +G D ++I F KIG+ ++AT ME + G D++
Sbjct: 96 RNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVI 155
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
+YN LI+ C G+ A LL +M ++G T ILI+ LC+ G + A LE M
Sbjct: 156 TYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKM 215
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 358
K G N +YN ++ K+ K++ AI M + D TY++++ LCK ++
Sbjct: 216 PKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKV 275
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+A +LL G + V+DGL G +A K+ ++R
Sbjct: 276 DAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMR 321
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID + D +L+ MR G+ PD++TY+SL+ G +R + ++ ++ +G
Sbjct: 300 VIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLG 359
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +YN++M L + K D A M+ P A++ I++ GL AL
Sbjct: 360 VKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEAL 419
Query: 122 RMFRGLQKHGFV 133
+ L G V
Sbjct: 420 ELLNELCLRGVV 431
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 199/426 (46%), Gaps = 25/426 (5%)
Query: 3 IDAYCQ--FVSFDAGY-TILNRMREAGISPDVVTYNSLIAGATRN------------SLL 47
+D++C+ FV + T + + E P+V AG + LL
Sbjct: 101 LDSFCRKFFVKLSPNFVTFVLQSVELREKPEVAVRFFFWAGKQKKYVHKIECHVSLIELL 160
Query: 48 SCSLDLLD------EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 101
+ S DL+ E+ + G+ + NSL+ LG +E V++ M + P
Sbjct: 161 TFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSL 220
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
T+N ++NGL + + ++A ++F + VP+ VTYNI+IKG CKAG+L+ A ++
Sbjct: 221 YTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRD 280
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ P+ ITY T+++ C+ R + L + M+ +G Y VI K +
Sbjct: 281 MEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRK 340
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
EA E M G + ++ Y LI+ Y K G +E A L + M+ +GFE D T+++
Sbjct: 341 CMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSV 400
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 340
L++GLCK+G + ++ G N Y ++D LGK G+I+ A N+FE M K
Sbjct: 401 LVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKG 460
Query: 341 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
DS+ Y++++ L K ++ A L + G ++DGL EA
Sbjct: 461 CARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAI 520
Query: 398 KIQSKI 403
K K+
Sbjct: 521 KFWDKM 526
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 169/357 (47%), Gaps = 4/357 (1%)
Query: 35 NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 94
NSLI L+ L + M E GI P +++YN L++ L + A +VF+ M
Sbjct: 189 NSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDG 248
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
G + P T T+NIM+ G CK A+ FR ++ P+ +TY LI+ T
Sbjct: 249 GKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDT 308
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
+ E+ + G +Y+ ++ + RK + M +KG + Y +I
Sbjct: 309 CLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALID 368
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
++ K G ++EA E+M +G + D V+Y+ L+N CK G+L+ L D +G
Sbjct: 369 SYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAI 428
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
+ + LIDGL KAG I+ A E M++ G + YN I+D L K GKID A+ +F
Sbjct: 429 NAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALF 488
Query: 335 ESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
ME + +T++ ++ L K + A K + G+ ++ +A+ GL
Sbjct: 489 GRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGL 545
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 178/394 (45%), Gaps = 3/394 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L++ + ++ + M I PD VTYN +I G + L +++ +M
Sbjct: 225 FLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMK 284
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD +Y +L+ + D ++ +M L ++++++ GLCK R A
Sbjct: 285 NVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEA 344
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + + G + Y LI K G + A + + + + G P+A+TY+ ++
Sbjct: 345 YAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNG 404
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ + G+E+ + KG + Y ++I K GR+++A + E+M G D
Sbjct: 405 LCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARD 464
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
YN +I+ K GK++ A L ME++G + YT TILIDGL K + A +
Sbjct: 465 SYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWD 524
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE---SMEVKDSFTYSSMVHNLCKAKR 357
M G + ++ + L GK+ A + + M + + M++ LCKA+R
Sbjct: 525 KMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIPETAFEDMINTLCKAQR 584
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ A KL + G I + +++ LR +G
Sbjct: 585 IKEACKLADGIVDRGREIPGRIRTVLINALRKAG 618
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 93/216 (43%), Gaps = 4/216 (1%)
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ +K +G ++I +F +G ++E +M +G+ + +YN L+N
Sbjct: 172 VFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLV 231
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
+E+A + + M+ D T+ I+I G CKAG ++ A M +
Sbjct: 232 NSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKI 291
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 368
Y ++ + D ++++ ME + +YS ++ LCK ++ A + +
Sbjct: 292 TYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETM 351
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ G R + A++D +G EA ++ +++
Sbjct: 352 NQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMK 387
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/358 (32%), Positives = 169/358 (47%), Gaps = 4/358 (1%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
TYN LI G + + DL EM GI P V +YN+++H L Q G+ + A F +M
Sbjct: 310 TYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEM 369
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
L P T+N +LNG CK AL +F L+ G P ++TYNILI G C+ G L
Sbjct: 370 RAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDL 429
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
AR + +E+ + G P+ TYT +MK + E M KG D F Y T
Sbjct: 430 EEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTR 489
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I A + +G + +A E M+ +G+ D V+YN LI+ CK G L A L +M G
Sbjct: 490 IRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGL 549
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
+ D T+T LI C+ G ++ AR + M G + Y + + G + A
Sbjct: 550 QPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYG 609
Query: 333 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
F M + + TY+ ++H LC+ R A + L+ G+ K ++DG
Sbjct: 610 WFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDG 667
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 168/371 (45%), Gaps = 4/371 (1%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
M GI P VVTYN++I G ++ + + EM MG+ PDV +YNSL++ + G
Sbjct: 333 EMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAG 392
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
EA +F D+ L P T+NI+++G C+ + A R+ + + G +P++ TY
Sbjct: 393 SLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYT 452
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
IL+KG A L AR E+ G P+ Y T ++ + M +
Sbjct: 453 ILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLE 512
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G + D Y +I K G L +A D +MV +G+Q D ++Y LI+ +C+ G L A
Sbjct: 513 GISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREA 572
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
+M G T+T+ I C+ GN+ A M + G + N YN ++
Sbjct: 573 RKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHA 632
Query: 321 LGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
L + G+ A F M V + +TY+ ++ CK A + ++G+
Sbjct: 633 LCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPD 692
Query: 377 KSAQKAVVDGL 387
KA+ G
Sbjct: 693 YLTHKALFKGF 703
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 166/337 (49%), Gaps = 38/337 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID YC+ + + M E G PDV TY L+ G+ L+ + + DEML
Sbjct: 418 ILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSK 477
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD ++YN+ + LG +A R+ + M+ ++ T T+NI+++GLCK ++A
Sbjct: 478 GLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDA 537
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + +G P+ +TY LI C+ G LR AR K++ G AP+A+TYT
Sbjct: 538 KDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVF--- 594
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
I A+ + G L A + +M+ +GV+ +
Sbjct: 595 --------------------------------IHAYCRRGNLYSAYGWFRKMLEEGVEPN 622
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
++YN LI+ C+ G+ + AY EM ++G +KYT+T+LIDG CK GN + A R +
Sbjct: 623 EITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYF 682
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
E M++ G + + + +G ++HAI E+
Sbjct: 683 E-MHQNGIHPDYLTHKALFKGF-DEGHMNHAIEYLEN 717
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 181/398 (45%), Gaps = 11/398 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRM--REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
L+D++ + D +L M R +G P+ VT+N +I G R L + ++++ M
Sbjct: 243 LLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGM-R 301
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ ++YN L+ L G +A+ + +M + P T+N M++GL ++ +
Sbjct: 302 LSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEA 361
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A F ++ G P+++TYN L+ G CKAG L+ A + +L +G AP +TY ++
Sbjct: 362 AQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILID 421
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
R + + M +G D Y ++ L A ++ ++M++ G+Q
Sbjct: 422 GYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQP 481
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D +YNT I G + A+ L + M +G D T+ ILIDGLCK GN+ A+
Sbjct: 482 DCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQ 541
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKA 355
M G + Y C++ + G + A F+ M + TY+ +H C+
Sbjct: 542 MKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRR 601
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 393
L SA L+ GV + + L H+ CR
Sbjct: 602 GNLYSAYGWFRKMLEEGVE----PNEITYNVLIHALCR 635
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 176/389 (45%), Gaps = 7/389 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
+ + M G++PDV N ++ + + + EML++GI P + +YN+L+
Sbjct: 188 SAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSF 247
Query: 77 FQLGKPDEANRVFQDMIC--GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
+ G+ D+ + ++M P T N+++ GL + + A M G++
Sbjct: 248 LKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKAS 307
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
TYN LI GL G ++ A + E+ + G P +TY ++ ++ + +
Sbjct: 308 SF-TYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKF 366
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
M+ G D Y +++ + K G LKEA + G+ +++YN LI+ YC+
Sbjct: 367 VEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRL 426
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
G LE A L +EM +QG D T+TIL+ G A ++ AR + M G + AY
Sbjct: 427 GDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAY 486
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
N + G I A + E M ++ D+ TY+ ++ LCK L A L + +
Sbjct: 487 NTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVH 546
Query: 371 SGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+G++ ++ G REA+K
Sbjct: 547 NGLQPDCITYTCLIHAHCERGLLREARKF 575
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 167/369 (45%), Gaps = 7/369 (1%)
Query: 41 ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPC 100
AT ++ + L EM G+ PDV N ++ L + D+ V +M+ + P
Sbjct: 177 ATPDTCSTLCLSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPS 236
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGF--VPELVTYNILIKGLCKAGRLRTARWI 158
T+N +L+ K D + + ++ G +P VT+N++I GL + G L A +
Sbjct: 237 IVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEM 296
Query: 159 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 218
++ + S A ++ TY ++ K ++ M+ +G Y +I ++
Sbjct: 297 VEGMRLSKKA-SSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQ 355
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
G+++ A +M G+Q D+++YN+L+N YCK G L+ A LL ++ G T
Sbjct: 356 SGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLT 415
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+ ILIDG C+ G+++ AR E M + G ++ Y ++ + A F+ M
Sbjct: 416 YNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEML 475
Query: 339 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
K D F Y++ + + A +L + G+ ++DGL +G
Sbjct: 476 SKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLN 535
Query: 395 EAKKIQSKI 403
+AK +Q K+
Sbjct: 536 DAKDLQMKM 544
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 98/185 (52%), Gaps = 7/185 (3%)
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHTILIDGLCK 288
+M+ G++ IV+YNTL++ + KEG+ + +LL EME +G C + TH ++I GL +
Sbjct: 227 EMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLAR 286
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 344
G+++ A +E M ++ ++ YN ++ L G + A ++ ME + T
Sbjct: 287 KGDLEEAAEMVEGM-RLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVT 345
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
Y++M+H L ++ ++ +A + G++ ++++G +G +EA + +R
Sbjct: 346 YNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLR 405
Query: 405 MAKIS 409
A ++
Sbjct: 406 HAGLA 410
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 157/304 (51%), Gaps = 1/304 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C +++LN M I+PDV TY LI + L + +LL M + G
Sbjct: 313 LICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEG 372
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V +Y++LM +G+ A ++F M+ ++ P ++NIM+NGLCK + D A+
Sbjct: 373 VKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAM 432
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ R + VP VTYN LI GLCK+GR+ +A ++KEL G + ITYT+++
Sbjct: 433 NLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGL 492
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N+ + + MK +G + + Y +I K RLK A + ++ G +D+
Sbjct: 493 CKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDV 552
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC-KAGNIKGARLHLE 300
+YN +I CKEG L+ A + +ME G D T I+I L K N K +L E
Sbjct: 553 YTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHE 612
Query: 301 YMNK 304
+ K
Sbjct: 613 MIAK 616
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 199/408 (48%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C +++L ++ + G P+ + +L+ G + SL D+++
Sbjct: 172 ILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQ 231
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G + SY +L++ L ++G+ A ++ + + P +N +++GLCK++ + A
Sbjct: 232 GFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEA 291
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P+++TY+ LI G C AG+L A +L E+ P+ TYT ++
Sbjct: 292 YDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDA 351
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K K +L M ++G + Y T++ + +G + A MV V
Sbjct: 352 LCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPS 411
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ SYN +IN CK ++ A LL EM + + T+ LIDGLCK+G I A ++
Sbjct: 412 VCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMK 471
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
++ G +++ Y ++D L K+ +D AI +F M+ + + +TY++++ LCK
Sbjct: 472 ELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGA 531
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
RL +A KL L G I ++ GL G EA ++SK+
Sbjct: 532 RLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKME 579
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 188/377 (49%), Gaps = 6/377 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ +L + + PDVV YN++I G ++ L++ + D EM G
Sbjct: 243 LLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRG 302
Query: 62 IPPDVWSYNSLMHCLFQL-GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PDV +Y++L+ C F L G+ A + +M ++ P T+ I+++ LCK A
Sbjct: 303 IFPDVITYSTLI-CGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEA 361
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K G P +VTY+ L+ G C G + A+ I + + P+ +Y ++
Sbjct: 362 KNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMING 421
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + +L M K + Y ++I K GR+ A D M+++ G D
Sbjct: 422 LCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPAD 481
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++Y +L++ CK L+ A L +M+++G + +KYT+T LIDGLCK +K A+ +
Sbjct: 482 VITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQ 541
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
++ G ++ YN ++ L K+G +D A+ + ME + D+ T+ ++ +L +
Sbjct: 542 HILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKD 601
Query: 357 RLPSASKLLLSCLKSGV 373
A KLL + G+
Sbjct: 602 ENDKAEKLLHEMIAKGL 618
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 194/397 (48%), Gaps = 6/397 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F ++ +M GI PD+VT + LI ++ S +L ++L++G P+ +
Sbjct: 148 FPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTT 207
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM L G+ ++ ++ ++ +LNGLCK T A+++ R ++
Sbjct: 208 LMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRS 267
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG- 190
P++V YN +I GLCK + A E+ G P+ ITY+T++ C F +G
Sbjct: 268 TRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLI-CGFCLAGQLMGA 326
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+L+ M K D + Y +I A K G+LKEA + + M +GV+ ++V+Y+TL++
Sbjct: 327 FSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDG 386
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
YC G++ A + M + ++ I+I+GLCK ++ A L M N
Sbjct: 387 YCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPN 446
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLL 366
YN ++D L K G+I A+++ + + + D TY+S++ LCK + L A L +
Sbjct: 447 TVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFM 506
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ G++ K A++DGL + A+K+ I
Sbjct: 507 KMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHI 543
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 194/436 (44%), Gaps = 65/436 (14%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
+++L ++ + G P+ +T +L+ G TR C++ L + + P +W +SL H
Sbjct: 31 FSVLGKILKLGYQPNSITLTTLMKGETR-----CAIKLPRMIEDRSTRPLMWLSSSLSHS 85
Query: 76 L---------------FQLGKPD------EANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+ F P +A F M+ TP F +L L K
Sbjct: 86 IPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKM 145
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
++ A+ + + ++ G P+LVT +ILI C G++ + +L ++ G+ PN I
Sbjct: 146 KHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIIL 205
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR------------- 221
TT+MK + K L + +G+ + Y T++ KIG
Sbjct: 206 TTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIED 265
Query: 222 ----------------------LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
+ EA D+ +M + G+ D+++Y+TLI +C G+L
Sbjct: 266 RSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMG 325
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A+ LL+EM + D YT+TILID LCK G +K A+ L M K G N+ Y+ ++D
Sbjct: 326 AFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMD 385
Query: 320 RLGKDGKIDHAINVFESM---EVKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
G++ +A +F +M EV S +Y+ M++ LCK K + A LL L V
Sbjct: 386 GYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVP 445
Query: 376 LKSAQKAVVDGLRHSG 391
+++DGL SG
Sbjct: 446 NTVTYNSLIDGLCKSG 461
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 107/201 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ S D +L M + P+ VTYNSLI G ++ ++ +LDL+ E+
Sbjct: 417 IMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHR 476
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P DV +Y SL+ L + D+A +F M + P T+ +++GLCK NA
Sbjct: 477 GQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNA 536
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F+ + G ++ TYN++I GLCK G L A + ++ D+G P+A+T+ I++
Sbjct: 537 QKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRS 596
Query: 181 CFRNRKYKLGLEILSAMKRKG 201
F + ++L M KG
Sbjct: 597 LFEKDENDKAEKLLHEMIAKG 617
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 112/277 (40%), Gaps = 20/277 (7%)
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK----CCFR--- 183
G VP LVT +ILI L G++ + +L ++ G+ PN+IT TT+MK C +
Sbjct: 6 GIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRCAIKLPR 65
Query: 184 --NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT--DGVQL 239
+ L LS+ F + D + V+ +G+ L
Sbjct: 66 MIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQFNGMLL 125
Query: 240 -----DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
I+ + ++ K A L +ME +G E D T +ILI+ C G +
Sbjct: 126 MRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAF 185
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 350
+ L + K+G+ N ++ L G++ +++ + + + + +Y ++++
Sbjct: 186 SFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLN 245
Query: 351 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
LCK A KLL R ++DGL
Sbjct: 246 GLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGL 282
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 178/360 (49%), Gaps = 6/360 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ +LN M E G P VTYN L++G + L+ + +L M+E G
Sbjct: 325 LIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 384
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD--LTPCTATFNIMLNGLCKNRYTDN 119
DV +YN+LM L GK DEA ++F M + L P TFN+++ GLCK
Sbjct: 385 KKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTK 444
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+++ R + K G LVTYN+L+ G KAG+++ A + K++ D G PN+ TY+ ++
Sbjct: 445 AVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILID 504
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ R + + M+ G F Y T++A+ K G L++A ++M +
Sbjct: 505 GFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEP 564
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DI+S+NT+I+ K G + L +M + G D T + LI+ L K G + A+ L
Sbjct: 565 DIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSAL 624
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
E M GF + Y+ ++ L G IN+ M K D S+++ LC +
Sbjct: 625 ERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHS 684
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 192/403 (47%), Gaps = 14/403 (3%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
F ++ + + + P T N L+ R+ + + M + + P S +
Sbjct: 54 QFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLS 113
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+L+ C KP V ++ T NI+L GLC+N A+ + R + +
Sbjct: 114 ALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRK 173
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
P++V+YN LI GLCKA +L+ A +L E+ +G PN++T TT+M ++ +
Sbjct: 174 SVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEA 233
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+E+L AMK+KG+ D Y T+I+ F G L + ++M+ G+ ++V+Y+ L++
Sbjct: 234 MELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHG 293
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
C+ G+ + A +L+ M + G D T+T LIDGLCK G A L M + G + +
Sbjct: 294 LCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPS 353
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
YN ++ L K+G + A + M K D TY++++ LC ++ A KL
Sbjct: 354 NVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFN 413
Query: 367 S------CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
S CL+ V ++ GL G +A KI K+
Sbjct: 414 SMFDNENCLEPNVFTF----NMLIGGLCKEGRLTKAVKIHRKM 452
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 177/355 (49%), Gaps = 8/355 (2%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
++ M +SPD+V+YN+LI G + L ++ LL EM G P+ + +LM L
Sbjct: 166 LIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLC 225
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G+ DEA + + M + +++G C N D +F + G +V
Sbjct: 226 KDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVV 285
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY+ L+ GLC+ G+ + A +L + + G P+ +TYT ++ ++ + +++L+ M
Sbjct: 286 TYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLM 345
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
KG Y +++ K G + +A + M+ G + D+V+YNTL+ C +GK+
Sbjct: 346 VEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKV 405
Query: 258 EAAYLLLDEM--EKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAY 314
+ A L + M + E + +T +LI GLCK G + K ++H M K G NL Y
Sbjct: 406 DEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIH-RKMVKKGSCGNLVTY 464
Query: 315 NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
N ++ K GKI A+ +++ + V +SFTYS ++ CK + L A L
Sbjct: 465 NMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLF 519
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 185/392 (47%), Gaps = 6/392 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ + G+ ++ + + G + +V N ++ G RN + ++ L+ EM
Sbjct: 115 LIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKS 174
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ SYN+L++ L + K EA + +M P + T +++GLCK+ D A+
Sbjct: 175 VSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAM 234
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++K GF ++V Y LI G C G L + + E+ G + N +TY+ ++
Sbjct: 235 ELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGL 294
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R ++K +L+AM G D Y +I K GR A D + MV G +
Sbjct: 295 CRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSN 354
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN L++ CKEG + A+ +L M ++G + D T+ L+ GLC G + A
Sbjct: 355 VTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNS 414
Query: 302 M--NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKA 355
M N+ + N+ +N ++ L K+G++ A+ + M K S TY+ ++ KA
Sbjct: 415 MFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKA 474
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
++ A +L L G ++DG
Sbjct: 475 GKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 506
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 138/290 (47%), Gaps = 6/290 (2%)
Query: 108 LNGLCK--NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
L LC+ N A+ +F +P T N L+ L ++ A + + +
Sbjct: 44 LRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHV 103
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
P+ + + +++C +K +LG ++ + ++G+T + F V+ + G + EA
Sbjct: 104 DVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEA 163
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ +M V DIVSYNTLIN CK KL+ A LL EME G + T T L+DG
Sbjct: 164 MGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDG 223
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 341
LCK G + A LE M K GFD+++ Y ++ +G +D +F+ M K +
Sbjct: 224 LCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISAN 283
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
TYS +VH LC+ + A+ +L + + G+ ++DGL G
Sbjct: 284 VVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDG 333
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 149/326 (45%), Gaps = 37/326 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-- 58
+L+ C+ + IL M E G DVVTYN+L+ G + +L L + M
Sbjct: 359 VLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDN 418
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI----CGDL----------------- 97
E + P+V+++N L+ L + G+ +A ++ + M+ CG+L
Sbjct: 419 ENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIK 478
Query: 98 --------------TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
P + T++I+++G CK R + A +F ++ HG P L YN L+
Sbjct: 479 EAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLM 538
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
LCK G L A+ + +E+G++ P+ I++ T++ + ++ E+ M G
Sbjct: 539 ASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLR 598
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D + T+I K+G L EA +E+MV G D + Y++L+ +G L
Sbjct: 599 PDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINL 658
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKA 289
L +M +G D+ + ++ LC +
Sbjct: 659 LHQMAAKGTVLDRKIVSTILTCLCHS 684
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 168/333 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ C D Y I+ M +G P+VV Y +LI +NS ++ +L EM E G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD++ YNSL+ L + + DEA +M+ L P T+ ++G + +A
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +++ G +P V LI CK G++ A + + D G +A TYT +M
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+N K EI M+ KG D F Y +I F K+G +++A+ ++MV +G+ ++
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ YN L+ +C+ G++E A LLDEM +G + T+ +IDG CK+G++ A +
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
M G + Y +VD + ++ AI +F
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 188/403 (46%), Gaps = 4/403 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ + ++L M G+S D TY+ LI G + + L+ EM+
Sbjct: 282 VLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSH 341
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI + Y+ + + + G ++A +F MI L P + ++ G C+ +
Sbjct: 342 GINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQG 401
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++K V TY ++KG+C +G L A I+KE+ SG PN + YTT++K
Sbjct: 402 YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKT 461
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+N ++ + +L MK +G D F Y ++I K R+ EA ++ +MV +G++ +
Sbjct: 462 FLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN 521
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y I+ Y + + +A + EM + G +K T LI+ CK G + A
Sbjct: 522 AFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYR 581
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G + + Y +++ L K+ K+D A +F M K D F+Y +++ K
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ AS + ++ G+ ++ G SG +AK++
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 171/364 (46%), Gaps = 4/364 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC+ + GY +L M++ I TY +++ G + L + +++ EM+ G
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V Y +L+ Q + +A RV ++M + P +N ++ GL K + D A
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++G P TY I G +A +A +KE+ + G PN + T ++
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K +M +G D Y ++ K ++ +A + +M G+ D+
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
SY LIN + K G ++ A + DEM ++G + + +L+ G C++G I+ A+ L+
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M+ G N Y I+D K G + A +F+ M++K DSF Y+++V C+
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 358 LPSA 361
+ A
Sbjct: 748 VERA 751
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 186/419 (44%), Gaps = 50/419 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + Q F +L M+E GI+PD+ YNSLI G ++ + + L EM+E G
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-ICGDLT--------------------PC 100
+ P+ ++Y + + + + A++ ++M CG L C
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577
Query: 101 TA--------------TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+A T+ +++NGL KN D+A +FR ++ G P++ +Y +LI G
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
K G ++ A I E+ + G PN I Y ++ R+ + + E+L M KG +
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
YCT+I + K G L EA ++M G+ D Y TL++ C+ +E A +
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG- 756
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI---GFD----SNLEAYNCIVD 319
K+G LI+ + K G L E +N++ FD N YN ++D
Sbjct: 757 TNKKGCASSTAPFNALINWVFKFGK---TELKTEVLNRLMDGSFDRFGKPNDVTYNIMID 813
Query: 320 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
L K+G ++ A +F M+ + TY+S+++ K R + + +G+
Sbjct: 814 YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 184/442 (41%), Gaps = 44/442 (9%)
Query: 7 CQFVSFDAGYTILNRMRE-------------------AGISPDVVTYNSLIAGATRNSLL 47
C F SF+ +++ RM E G S D V + L G +
Sbjct: 108 CNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKEYI 167
Query: 48 SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 107
++ + + + + P + L+ L + + D V++ M+ ++ T++++
Sbjct: 168 EEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHML 227
Query: 108 LNGLCK---------------------NRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ C+ D AL++ + G VP TY++LI GL
Sbjct: 228 IIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGL 287
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK RL A+ +L E+ G + + TY+ ++ + R ++ M G
Sbjct: 288 CKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKP 347
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ Y I K G +++A + M+ G+ +Y +LI YC+E + Y LL E
Sbjct: 348 YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVE 407
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+K+ YT+ ++ G+C +G++ GA ++ M G N+ Y ++ ++ +
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467
Query: 327 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
A+ V + M+ D F Y+S++ L KAKR+ A L+ +++G++ A
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527
Query: 383 VVDGLRHSGCRREAKKIQSKIR 404
+ G + A K ++R
Sbjct: 528 FISGYIEASEFASADKYVKEMR 549
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 147/316 (46%), Gaps = 10/316 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ + + + +I + M E G++P+V+ YN L+ G R+ + + +LLDEM
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ +Y +++ + G EA R+F +M L P + + +++G C+ + A
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH----APNAITYTT 176
+ +F G K G +N LI + K G+ +L L D PN +TY
Sbjct: 752 ITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ + + E+ M+ Y +++ + K+GR E ++ + G
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ-----GFECDKYTHTILIDGLCKAGN 291
++ D + Y+ +IN + KEG A +L+D+M + G + T L+ G K G
Sbjct: 871 IEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGE 930
Query: 292 IKGARLHLEYMNKIGF 307
++ A +E M ++ +
Sbjct: 931 MEVAEKVMENMVRLQY 946
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 121/295 (41%), Gaps = 43/295 (14%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
ML+ +C+ + +L+ M G+ P+ VTY ++I G ++ L+ + L DEM
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726
Query: 61 GIPPDVWSY----------------------------------NSLMHCLFQLGKPDEAN 86
G+ PD + Y N+L++ +F+ GK +
Sbjct: 727 GLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKT 786
Query: 87 RVFQDMICGDL----TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
V ++ G P T+NIM++ LCK + A +F +Q +P ++TY L
Sbjct: 787 EVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
+ G K GR + E +G P+ I Y+ I+ + L ++ M K
Sbjct: 847 LNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA 906
Query: 203 TFDG----FGYC-TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
DG C +++ F K+G ++ A ME MV D + LIN C
Sbjct: 907 VDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 182/370 (49%), Gaps = 6/370 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ +LN M E G P VTYN L++G + L+ + +L M+E G
Sbjct: 179 LIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 238
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD--LTPCTATFNIMLNGLCKNRYTDN 119
DV +YN+LM L GK DEA ++F M + L P TFN+++ GLCK
Sbjct: 239 KKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTK 298
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+++ R + K G LVTYN+L+ G KAG+++ A + K++ D G PN+ TY+ ++
Sbjct: 299 AVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILID 358
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ R + + M+ G F Y T++A+ K G L++A ++M +
Sbjct: 359 GFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEP 418
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DI+S+NT+I+ K G + L +M + G D T + LI+ L K G + A+ L
Sbjct: 419 DIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSAL 478
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
E M GF + Y+ ++ L G IN+ M K D S+++ LC +
Sbjct: 479 ERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHS 538
Query: 356 KRLPSASKLL 365
+ +LL
Sbjct: 539 IQEVDVMELL 548
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 198/402 (49%), Gaps = 6/402 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+ D +L M++ G DVV Y +LI+G N L +L DEML G
Sbjct: 74 LMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKG 133
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I +V +Y+ L+H L +LG+ EAN V M + P T+ +++GLCK+ +A+
Sbjct: 134 ISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAM 193
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P VTYN+L+ GLCK G + A IL+ + + G + +TY T+MK
Sbjct: 194 DLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGL 253
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDG--FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
K L++ ++M + F + +I K GRL +A +MV G
Sbjct: 254 CDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCG 313
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
++V+YN L+ K GK++ A L ++ GF + +T++ILIDG CK + A+
Sbjct: 314 NLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLF 373
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
M G + L YN ++ L K+G ++ A ++F+ M D ++++M+ KA
Sbjct: 374 CEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKA 433
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
+L + ++ G+R +++ L G EAK
Sbjct: 434 GDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAK 475
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 177/355 (49%), Gaps = 8/355 (2%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
++ M +SPD+V+YN+LI G + L ++ LL EM G P+ + +LM L
Sbjct: 20 LIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLC 79
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G+ DEA + + M + +++G C N D +F + G +V
Sbjct: 80 KDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVV 139
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY+ L+ GLC+ G+ + A +L + + G P+ +TYT ++ ++ + +++L+ M
Sbjct: 140 TYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLM 199
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
KG Y +++ K G + +A + M+ G + D+V+YNTL+ C +GK+
Sbjct: 200 VEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKV 259
Query: 258 EAAYLLLDEM--EKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAY 314
+ A L + M + E + +T +LI GLCK G + K ++H M K G NL Y
Sbjct: 260 DEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIH-RKMVKKGSCGNLVTY 318
Query: 315 NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
N ++ K GKI A+ +++ + V +SFTYS ++ CK + L A L
Sbjct: 319 NMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLF 373
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 161/310 (51%), Gaps = 14/310 (4%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
NI+L GLC+N A+ + R + + P++V+YN LI GLCKA +L+ A +L E+
Sbjct: 1 MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+G PN++T TT+M ++ + +E+L AMK+KG+ D Y T+I+ F G L
Sbjct: 61 AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
+ ++M+ G+ ++V+Y+ L++ C+ G+ + A +L+ M + G D T+T LI
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
DGLCK G A L M + G + + YN ++ L K+G + A + M K
Sbjct: 181 DGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKK 240
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLS------CLKSGVRILKSAQKAVVDGLRHSGCR 393
D TY++++ LC ++ A KL S CL+ V ++ GL G
Sbjct: 241 ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTF----NMLIGGLCKEGRL 296
Query: 394 REAKKIQSKI 403
+A KI K+
Sbjct: 297 TKAVKIHRKM 306
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 171/359 (47%), Gaps = 6/359 (1%)
Query: 35 NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 94
N ++ G RN + ++ L+ EM + PD+ SYN+L++ L + K EA + +M
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
P + T +++GLCK+ D A+ + ++K GF ++V Y LI G C G L
Sbjct: 62 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
+ + E+ G + N +TY+ ++ R ++K +L+AM G D Y +I
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
K GR A D + MV G + V+YN L++ CKEG + A+ +L M ++G +
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYM--NKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
D T+ L+ GLC G + A M N+ + N+ +N ++ L K+G++ A+
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 301
Query: 333 VFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ M K S TY+ ++ KA ++ A +L L G ++DG
Sbjct: 302 IHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 360
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 149/326 (45%), Gaps = 37/326 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-- 58
+L+ C+ + IL M E G DVVTYN+L+ G + +L L + M
Sbjct: 213 VLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDN 272
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI----CGDL----------------- 97
E + P+V+++N L+ L + G+ +A ++ + M+ CG+L
Sbjct: 273 ENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIK 332
Query: 98 --------------TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
P + T++I+++G CK R + A +F ++ HG P L YN L+
Sbjct: 333 EAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLM 392
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
LCK G L A+ + +E+G++ P+ I++ T++ + ++ E+ M G
Sbjct: 393 ASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLR 452
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D + T+I K+G L EA +E+MV G D + Y++L+ +G L
Sbjct: 453 PDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINL 512
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKA 289
L +M +G D+ + ++ LC +
Sbjct: 513 LHQMAAKGTVLDRKIVSTILTCLCHS 538
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 187/380 (49%), Gaps = 4/380 (1%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
+ + + M E G+ D V Y +L+ G + + + + E++E + PD YN
Sbjct: 517 NIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYN 576
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
++CL LGK EA ++M L P AT+N M+ C+ T AL++ + ++++
Sbjct: 577 VFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRN 636
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
P L+TY L+ GL +AG ++ A+++L E+ +G AP ++T+ +++ C +R+ +
Sbjct: 637 SIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVI 696
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
LEI M G D Y T++ G + AT +++M+T G+ D +++N LI
Sbjct: 697 LEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILG 756
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+CK L+ A+ + +M QG + T L+ GL AG I A L M K+G + N
Sbjct: 757 HCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPN 816
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
Y+ +V K A+ ++ M K + TY+S++ + KA + A +L
Sbjct: 817 NLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFS 876
Query: 367 SCLKSGVRILKSAQKAVVDG 386
+ GV S +++G
Sbjct: 877 EMKRRGVLHTSSTYDILLNG 896
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 187/384 (48%), Gaps = 4/384 (1%)
Query: 30 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 89
DVV +N+LI G + ++ +L +++ M G+ DV YNSL+ F G D A V
Sbjct: 186 DVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVV 245
Query: 90 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
+ M + P T+ ++ CK + D A ++ G+ + G +P++VT + L+ GLC+
Sbjct: 246 ERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRD 305
Query: 150 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 209
G+ A + +E+ G APN +TY T++ + R+ L +L M +G D Y
Sbjct: 306 GQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMY 365
Query: 210 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
++ K G+++EA D + +D + + V+Y L++ +C+ G ++ A +L +ME+
Sbjct: 366 TALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEE 425
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 329
+ + T + +I+GL K G + A ++ M G N+ Y ++D K +
Sbjct: 426 KSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEA 485
Query: 330 AINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 385
A++V+ M ++F S+V+ L K + A L + G+ + ++D
Sbjct: 486 ALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMD 545
Query: 386 GLRHSGCRREAKKIQSKIRMAKIS 409
GL +G A K+ ++ +S
Sbjct: 546 GLFKTGNMPAAFKVGQELMEKNLS 569
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 196/397 (49%), Gaps = 6/397 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+ F Y + M + G++P+ VTY +LI + S SL LL EM+ G
Sbjct: 298 LVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRG 357
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D+ Y +LM L + GK +EA V + ++TP T+ ++++ C+ D A
Sbjct: 358 VVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAE 417
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ +++ +P +VT++ +I GL K G L A ++++ DSG APN +TY T++
Sbjct: 418 QVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGF 477
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ + + L++ M +G + F +++ K G ++ A + M G+ LD
Sbjct: 478 FKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDH 537
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y TL++ K G + AA+ + E+ ++ D + + I+ LC G A+ L+
Sbjct: 538 VNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKE 597
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSF-TYSSMVHNLCKAKR 357
M G + + YN ++ ++GK A+ + + M+ +K + TY+++V L +A
Sbjct: 598 MRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGV 657
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
+ A LL +G + V+ SG RR
Sbjct: 658 VKKAKFLLNEMASAGFAPTSLTHQRVLQAC--SGSRR 692
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 198/409 (48%), Gaps = 6/409 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+DA+C+ + D +L +M E + P+VVT++S+I G + L + D + +M +
Sbjct: 402 VLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDS 461
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+V +Y +L+ F+ + A V++DM+ + + ++NGL KN + A
Sbjct: 462 GIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGA 521
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ + + G + + V Y L+ GL K G + A + +EL + +P+A+ Y + C
Sbjct: 522 EALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINC 581
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K+ L M+ G D Y T+IAA + G+ +A +++M + ++ +
Sbjct: 582 LCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPN 641
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL- 299
+++Y TL+ + G ++ A LL+EM GF TH ++ C L +
Sbjct: 642 LITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQA-CSGSRRPDVILEIH 700
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
E M G +++ YN +V L G +A V + M + D+ T+++++ CK+
Sbjct: 701 ELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKS 760
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
L +A + L G+ + ++ GL +G EA + S ++
Sbjct: 761 SHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMK 809
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 200/471 (42%), Gaps = 76/471 (16%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ A ++ RM G++ DVV YNSL+AG + +L++++ M G
Sbjct: 193 LIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADG 252
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V +Y +L+ + DEA +++ M+ + P T + +++GLC++ A
Sbjct: 253 VEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAY 312
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKA-------------------------------- 149
+FR + K G P VTY LI L KA
Sbjct: 313 ALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRL 372
Query: 150 ---GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
G++ A+ +L+ PN +TYT ++ R ++L M+ K +
Sbjct: 373 GKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNV 432
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK------------- 253
+ ++I VK G L +A DYM +M G+ ++V+Y TLI+ + K
Sbjct: 433 VTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRD 492
Query: 254 ----------------------EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
G +E A L +M+++G D +T L+DGL K GN
Sbjct: 493 MLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGN 552
Query: 292 IKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 346
+ A ++ E M K + YN ++ L GK A + + M D TY+
Sbjct: 553 MPAAFKVGQELMEK-NLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYN 611
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
+M+ C+ + A KLL ++ ++ +V GL +G ++AK
Sbjct: 612 TMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAK 662
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 138/288 (47%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+LN M AG +P +T+ ++ + + L++ + M+ G+ D+ YN+L+H L
Sbjct: 664 LLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLC 723
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
G A V +M+ + P T TFN ++ G CK+ + DNA ++ + G P +
Sbjct: 724 CHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIA 783
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T+N L+ GL AGR+ A +L ++ G PN +TY ++ + L + M
Sbjct: 784 TFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEM 843
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
KG+ Y ++++ F K G + +A + +M GV +Y+ L+N + K
Sbjct: 844 VSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNG 903
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
+LL +M++ GF+ K T + + + G AR L+ + K+
Sbjct: 904 IEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTLFKV 951
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 145/342 (42%), Gaps = 35/342 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ I+ C F + L MR G+ PD TYN++IA R S +L LL EM
Sbjct: 577 VFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRN 636
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT----------------- 103
I P++ +Y +L+ L + G +A + +M P + T
Sbjct: 637 SIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVI 696
Query: 104 ------------------FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+N +++ LC + NA + + G P+ +T+N LI G
Sbjct: 697 LEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILG 756
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
CK+ L A I ++ G +PN T+ T++ + +LS MK+ G +
Sbjct: 757 HCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPN 816
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y ++ + K EA +MV+ G +YN+L++ + K G + A L
Sbjct: 817 NLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFS 876
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
EM+++G T+ IL++G K N R+ L+ M ++GF
Sbjct: 877 EMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGF 918
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 153/350 (43%), Gaps = 41/350 (11%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
T ++NI L L + + A + + K G + VT + + GLC+ G + A + +
Sbjct: 115 TVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAE 174
Query: 161 EL--GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 218
L G + + + ++ + + L ++ M +G D GY +++A F
Sbjct: 175 MLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFH 234
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
G A + +E+M DGV+ ++V+Y LI YCK ++ A+ L + M + G D T
Sbjct: 235 SGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVT 294
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSN---------------------------- 310
+ L+DGLC+ G A M+KIG N
Sbjct: 295 LSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMV 354
Query: 311 -------LEAYNCIVDRLGKDGKIDHAINVF---ESMEVKDSF-TYSSMVHNLCKAKRLP 359
L Y ++DRLGK+GKI+ A +V +S + +F TY+ +V C+A +
Sbjct: 355 SRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNID 414
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
A ++LL + V ++++GL GC +A K++ + I+
Sbjct: 415 GAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIA 464
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 111/254 (43%), Gaps = 15/254 (5%)
Query: 133 VP-ELVTYNILIKGLCKAGRLRTARWILKELGDSGH----APNAITYTTIMKCCFRNRKY 187
VP + +T N +I C LR A +L+ A + ++Y +
Sbjct: 72 VPGDTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHG 131
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV----TDGVQLDIVS 243
+L +LS M ++G ++DG T + + G + EA E +V DG LD+V
Sbjct: 132 RLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDG--LDVVG 189
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
+N LI+ YCK + AA +++ M QG D + L+ G +G+ A +E M
Sbjct: 190 WNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMK 249
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLP 359
G + N+ Y ++ K +D A +++E M + D T S++V LC+ +
Sbjct: 250 ADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFS 309
Query: 360 SASKLLLSCLKSGV 373
A L K GV
Sbjct: 310 EAYALFREMDKIGV 323
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 91/182 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ D + I +M G+SP++ T+N+L+ G + + +L +M ++G
Sbjct: 753 LILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVG 812
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +Y+ L+ + EA R++ +M+ P +T+N +++ K + A
Sbjct: 813 LEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAK 872
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++ G + TY+IL+ G K R +LK++ + G P+ T +++ +
Sbjct: 873 ELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAF 932
Query: 182 FR 183
R
Sbjct: 933 SR 934
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 76/146 (52%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
T+L+ M++ G+ P+ +TY+ L+ G + S +L L EM+ G P +YNSLM
Sbjct: 803 TVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDF 862
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ G ++A +F +M + ++T++I+LNG K R + + +++ GF P
Sbjct: 863 AKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSK 922
Query: 137 VTYNILIKGLCKAGRLRTARWILKEL 162
T + + + + G AR +LK L
Sbjct: 923 GTISSMSRAFSRPGMTGEARRLLKTL 948
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 191/411 (46%), Gaps = 47/411 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ C G+ + G SP++VTYN+LI G +S + L M ++
Sbjct: 109 ILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKL 168
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT-------PCTATFNIMLNGLCK 113
G PDV +Y +L+ L G + A ++ Q+M+ D++ P T+NI+++GLCK
Sbjct: 169 GCTPDVVTYGTLIKGLCGTGNINIALKLHQEML-NDISRYEINCKPNVITYNIIVDGLCK 227
Query: 114 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
D A ++F ++ G +P +++YN LI G C AG+ ++ +L E+ D G P+ +T
Sbjct: 228 VGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVT 287
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
+ ++ + K ++L M G D Y ++I F +G L A + M
Sbjct: 288 FNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMP 347
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE--------------------------- 266
+ G + D++SYN LIN Y K K+E A L +E
Sbjct: 348 SKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVD 407
Query: 267 --------MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
M+ G + YT+ I +DGLCK + A + F +E NC++
Sbjct: 408 DAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLI 467
Query: 319 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
D L K GK++ A +FE + + + TY+ M+H C+ ++ A+ L+
Sbjct: 468 DGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLI 518
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 170/341 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D C+ D + M+ G+ P +++YNSLI G S LLDEML+
Sbjct: 220 IIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQ 279
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD+ ++N L+ L + GK EA ++ MI + P T+N ++ G C ++A
Sbjct: 280 GLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSA 339
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G P++++YN+LI G K ++ A + E+ G PN ITY +++K
Sbjct: 340 RELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKG 399
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F K ++ S MK G + + Y + K L EA ++ + +L+
Sbjct: 400 IFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLE 459
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I + N LI+ CK GKLE A+ L +++ +G E + T+TI+I G C+ G + A + ++
Sbjct: 460 IENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQ 519
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 341
M G ++ YN ++ + K++ + + M KD
Sbjct: 520 KMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKD 560
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 189/393 (48%), Gaps = 10/393 (2%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M + +P + ++N L++G + S L ++M G+ D + N L++CL + +
Sbjct: 60 MMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNR 119
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
E F ++ +P T+N ++ GLC A R+F +QK G P++VTY
Sbjct: 120 LREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGT 179
Query: 142 LIKGLCKAGRLRTARWILKE-LGDSGH-----APNAITYTTIMKCCFRNRKYKLGLEILS 195
LIKGLC G + A + +E L D PN ITY I+ + + ++
Sbjct: 180 LIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFE 239
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
MK +G Y ++I F G+ +E+ +++M+ G+Q D+V++N LI+ CKEG
Sbjct: 240 EMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEG 299
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
K+ A LL M + G D T+ LI+G C G++ AR M G + ++ +YN
Sbjct: 300 KVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYN 359
Query: 316 CIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
+++ K K++ A+ ++ M + + TY S++ + A ++ A KL
Sbjct: 360 VLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAH 419
Query: 372 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
G+ +DGL + C EA K+ ++++
Sbjct: 420 GIAENSYTYGIFLDGLCKNDCLFEAMKLFTELK 452
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 193/409 (47%), Gaps = 45/409 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML--- 58
LI C + RM++ G +PDVVTY +LI G ++ +L L EML
Sbjct: 145 LIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDI 204
Query: 59 ---EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
E+ P+V +YN ++ L ++G+ DEA ++F++M + P ++N +++G C
Sbjct: 205 SRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAG 264
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
+ + R+ + G P++VT+N+LI LCK G++ A+ +L + +SG P+ +TY
Sbjct: 265 KWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYN 324
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
++++ E+ +M KG D Y +I + K +++EA +M+
Sbjct: 325 SLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLV 384
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI-------------- 281
G + ++++Y++L+ GK++ A L M+ G + YT+ I
Sbjct: 385 GKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEA 444
Query: 282 ---------------------LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
LIDGLCKAG ++ A E ++ G + N+ Y ++
Sbjct: 445 MKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHG 504
Query: 321 LGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
++G++D A + + ME D TY++++ ++ +L +LL
Sbjct: 505 FCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLL 553
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 179/378 (47%), Gaps = 10/378 (2%)
Query: 42 TRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 101
T N + +L M+ P + S+N L+ L ++ + ++ M L+
Sbjct: 45 TGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDR 104
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
T NI+LN LC F G+ + G+ P +VTYN LIKGLC R+ A +
Sbjct: 105 CTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLR 164
Query: 162 LGDSGHAPNAITYTTIMK-CCFR---NRKYKLGLEILSAMKRKGYT--FDGFGYCTVIAA 215
+ G P+ +TY T++K C N KL E+L+ + R + Y ++
Sbjct: 165 MQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDG 224
Query: 216 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
K+GR EA E+M T G+ I+SYN+LI+ +C GK E + LLDEM QG + D
Sbjct: 225 LCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPD 284
Query: 276 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
T +LID LCK G + A+ L M + G +L YN +++ G ++ A +F
Sbjct: 285 MVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFV 344
Query: 336 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
SM K D +Y+ +++ K ++ A KL L G R +++ G+ +G
Sbjct: 345 SMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAG 404
Query: 392 CRREAKKIQSKIRMAKIS 409
+AKK+ S ++ I+
Sbjct: 405 KVDDAKKLFSVMKAHGIA 422
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 204/410 (49%), Gaps = 47/410 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++A+ + + + +L E P+ + Y ++I G + + + +LLDEM E
Sbjct: 81 VLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKER 140
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ DV +++L+ L + G+ DEA F+ M + +P T+N ++NGLCK D A
Sbjct: 141 GVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEECSPNVITYNTVVNGLCKANRIDEA 199
Query: 121 LRMFRGLQK-----HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
L +F ++K HG P++++Y+ +I LCKA R+ A K + G APN +TY+
Sbjct: 200 LELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYS 259
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
+++ + + LE+L MK KG+ + + ++ A K ++A + E+++
Sbjct: 260 SLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKS 319
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G + ++V+YN ++ CK G+++ AY +L EM + D T++ +IDG CKAG + A
Sbjct: 320 GKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKA 379
Query: 296 ------------------------------------RLHLEYMNKIGFDSNLEAYNCIVD 319
R+H + +N GF L+ YN ++D
Sbjct: 380 DDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNA-GFIPGLQTYNVLMD 438
Query: 320 RLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
+ ++ A+ ++ M+ K D TY+ ++ LC+A+R+ A + L
Sbjct: 439 CVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFL 488
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 187/399 (46%), Gaps = 42/399 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+IDA C+ D Y RMR G +P+VVTY+SLI G + S L+LL M E G
Sbjct: 226 VIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKG 285
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
++ +N+++H L++ + ++A + F+ ++ P T+N+ ++GLCK D A
Sbjct: 286 FGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAY 345
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRL----------------------------- 152
R+ + + P+++TY+ +I G CKAGR+
Sbjct: 346 RILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGF 405
Query: 153 ------RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
R A + +++ ++G P TY +M C + LEI MKRK D
Sbjct: 406 SEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDC 465
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I + R+ EA ++++ M D V + + L+ + CK+G+++ A +LD
Sbjct: 466 NTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDN 525
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
+ + G + T IL++ L + A + + GF ++ Y+ V + K GK
Sbjct: 526 VVEVGCQPLGETFKILVEELYLRKKWEAAS---KLLRSPGFVADAATYSLCVAEICKAGK 582
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSA 361
D A+ V E M +K D TY +++ +LC R+ SA
Sbjct: 583 PDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESA 621
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 195/444 (43%), Gaps = 78/444 (17%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGI---------------------------------- 27
+I+ +C+ D + +L+ M+E G+
Sbjct: 117 VINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEEC 176
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEM-----LEMGIPPDVWSYNSLMHCLFQLGKP 82
SP+V+TYN+++ G + + + +L+L D+M G PDV SY++++ L + +
Sbjct: 177 SPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRV 236
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLC------------------------------ 112
D+A F+ M P T++ +++GLC
Sbjct: 237 DKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAM 296
Query: 113 -----KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 167
KN + A + F L K G P +VTYN+ + GLCKAGR+ A IL E+ +S
Sbjct: 297 LHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKV 356
Query: 168 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
P+ ITY++I+ + + ++ + M + T++ F + + +EA
Sbjct: 357 TPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFR 416
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
E MV G + +YN L++ C +E+A + +M+++ + D T+ LI LC
Sbjct: 417 VHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLC 476
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES-MEV---KDSF 343
+A + A+ L+ M N + +V+ L K G++D A +V ++ +EV
Sbjct: 477 RARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGE 536
Query: 344 TYSSMVHNLCKAKRLPSASKLLLS 367
T+ +V L K+ +ASKLL S
Sbjct: 537 TFKILVEELYLRKKWEAASKLLRS 560
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 159/370 (42%), Gaps = 42/370 (11%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
CQF R+ ++G P+VVTYN + G + + + +L EM+E + PDV
Sbjct: 310 CQF---------FERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDV 360
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
+Y+S++ + G+ D+A+ VF M+ + P TF +L+G +++ + A R+
Sbjct: 361 ITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHED 420
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
+ GF+P L TYN+L+ +C A + +A I ++ P+ TY +++C R R+
Sbjct: 421 MVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARR 480
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ-------- 238
E L M+ +G ++ K G + EA ++ +V G Q
Sbjct: 481 VDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKI 540
Query: 239 ------------------------LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
D +Y+ + CK GK + A ++++M +G
Sbjct: 541 LVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRP 600
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
D+ T+ ++ LC ++ A E M G L Y ++ D A +F
Sbjct: 601 DEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIF 660
Query: 335 ESMEVKDSFT 344
E+M V FT
Sbjct: 661 EAM-VAAGFT 669
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 151/314 (48%), Gaps = 10/314 (3%)
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G + ++ L++ + + +EA+R+ ++ + P + ++NG CK D A
Sbjct: 71 GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ G +++ ++ LI+GLC+ GR+ A K +G+ +PN ITY T++
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEEC-SPNVITYNTVVNG 189
Query: 181 CFRNRKYKLGLEILSAMKRK-----GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
+ + LE+ M+++ G D Y TVI A K R+ +A +Y ++M
Sbjct: 190 LCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAV 249
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G ++V+Y++LI+ CK + LL M+++GF + ++ L K + A
Sbjct: 250 GCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKA 309
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHN 351
E + K G N+ YN V L K G++D A + + ES D TYSS++
Sbjct: 310 CQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDG 369
Query: 352 LCKAKRLPSASKLL 365
CKA R+ A +
Sbjct: 370 FCKAGRMDKADDVF 383
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 148/337 (43%), Gaps = 32/337 (9%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
+ C+ D Y IL M E+ ++PDV+TY+S+I G + + + D+ M+
Sbjct: 332 VHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHEC 391
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P ++ +L+H + K EA RV +DM+ P T+N++++ +C ++AL
Sbjct: 392 IPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALE 451
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN-AITYTTIMKCC 181
++ +++ P+ TY LI+ LC+A R+ A+ L + PN AI + + C
Sbjct: 452 IYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLC 511
Query: 182 FRNR---------------------KYKLGLEILSAMKR----------KGYTFDGFGYC 210
+ +K+ +E L K+ G+ D Y
Sbjct: 512 KQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYS 571
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
+A K G+ EA + +EQMV GV+ D +Y ++ C ++E+A ++M +
Sbjct: 572 LCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASR 631
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
G T+T+LI C A A E M GF
Sbjct: 632 GCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGF 668
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 151/329 (45%), Gaps = 13/329 (3%)
Query: 93 ICGDLTPCTATFNIMLNG--LCKNRYTDNALRMFRGL-QKHGFVPELVTYNILIKGLCKA 149
+C DL +T + G L + D A F+ K GF T +L+ KA
Sbjct: 30 LCRDLAGYASTVTPEVAGRVLQQVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKA 89
Query: 150 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 209
R A +LKE + PN I YTT++ + + E+L MK +G D +
Sbjct: 90 KRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLH 149
Query: 210 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
T+I + GR+ EA + + M + ++++YNT++N CK +++ A L D+MEK
Sbjct: 150 STLIQGLCRKGRIDEALEQFKSM-GEECSPNVITYNTVVNGLCKANRIDEALELFDDMEK 208
Query: 270 Q-----GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+ G E D +++ +ID LCKA + A + + M +G N+ Y+ ++D L K
Sbjct: 209 RYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKV 268
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
+ + + M+ K + +++M+H L K A + LKSG +
Sbjct: 269 DRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTY 328
Query: 381 KAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
V GL +G EA +I ++ +K++
Sbjct: 329 NVAVHGLCKAGRVDEAYRILLEMVESKVT 357
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 117/290 (40%), Gaps = 38/290 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C S ++ I ++M+ PD TY LI R + + + LD M
Sbjct: 435 VLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEAD 494
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P+ ++L+ L + G+ DEA V +++ P TF I++ L + + A
Sbjct: 495 NVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAA 554
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ R GFV + TY++ + +CKAG+ A +++++ G P+ TY +++
Sbjct: 555 SKLLRS---PGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLR- 610
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + R++ A E+M + G
Sbjct: 611 ----------------------------------SLCGLDRVESAIAEFEKMASRGCAPG 636
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+V+Y LI C + A+ + + M GF T L L AG
Sbjct: 637 LVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAG 686
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 48/116 (41%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
C+ D ++ +M G+ PD TY +++ + ++ ++M G P +
Sbjct: 578 CKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGL 637
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
+Y L+ DEA R+F+ M+ TP T + + L Y D +R
Sbjct: 638 VTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQDLLVR 693
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 173/359 (48%), Gaps = 4/359 (1%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
+ D ++ NRM P +V ++ L+ TR S L L +M GIP + ++ N
Sbjct: 34 TIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLN 93
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
L++ L + A V D++ P TATF ++ GLC AL++F +
Sbjct: 94 ILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGE 153
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
GF P+++TY LI GLCK G TA L+ + P + Y+TI+ ++R+
Sbjct: 154 GFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEA 213
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
L + S M KG + + F Y ++I +G KEA M+ + D +++NTL++
Sbjct: 214 LSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDA 273
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
CKEG + A+ ++D M + + D T+ L+DG C + + M + G +
Sbjct: 274 LCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPS 333
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
+ +Y +++ K +D A+ +FE M + D+ TY++++H LC RL A L
Sbjct: 334 VISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALF 392
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 182/369 (49%), Gaps = 6/369 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + ++M G PDV+TY +LI G + S ++ L M +
Sbjct: 130 LIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRN 189
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V Y++++ L + + EA +F DM+ ++P T++ +++GLC + A+
Sbjct: 190 CRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAI 249
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC- 180
R+F + +P+ +T+N L+ LCK G + A +++ + S P+ +TY ++M
Sbjct: 250 RLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGH 309
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C R+ K + + M RKG Y T+I + KI + +A E+M G+ D
Sbjct: 310 CLRSEMGK-TVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPD 368
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+YNTLI+ C G+L A L EM G D T+ IL D LCK + A + L+
Sbjct: 369 TVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLK 428
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
+ D ++ Y+ ++D + + G+++ A ++F + K D TY+ M++ LC+
Sbjct: 429 VIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQG 488
Query: 357 RLPSASKLL 365
L ASKL
Sbjct: 489 LLAEASKLF 497
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 189/402 (47%), Gaps = 4/402 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ + L M + P VV Y+++I ++ L+ +L L +ML G
Sbjct: 165 LINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKG 224
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+ ++Y+SL+H L LG EA R+F MI + P TFN +++ LCK A
Sbjct: 225 ISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAH 284
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + P++VTYN L+ G C + + + G P+ I+YTT++
Sbjct: 285 YVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGY 344
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + + M ++G D Y T+I +GRL++A +MV G D+
Sbjct: 345 CKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDL 404
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y L + CK +L A +LL +E + D + ++I++DG+C+AG ++ AR
Sbjct: 405 VTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSK 464
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
++ G ++ Y +++ L + G + A +F M+ ++ TY+ + +
Sbjct: 465 LSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNE 524
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
A +L L G I S +V+ L G + K+I
Sbjct: 525 TLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQI 566
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 184/391 (47%), Gaps = 4/391 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ +M GI + T N LI + L + +L ++L++G P ++ +L+ L
Sbjct: 75 SLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGL 134
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
GK EA ++F M P T+ ++NGLCK T A+R R +++ P +
Sbjct: 135 CVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTV 194
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
V Y+ +I LCK +L A + ++ G +PN TY++++ +K + + A
Sbjct: 195 VVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYA 254
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M + D + T++ A K G + +A ++ M+ ++ D+V+YN+L++ +C +
Sbjct: 255 MIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSE 314
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+ + D M ++G ++T LI+G CK + A E M++ G + YN
Sbjct: 315 MGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNT 374
Query: 317 IVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++ L G++ AI +F M ++ D TY + LCK RL A LL +
Sbjct: 375 LIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTN 434
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ V+DG+ +G A+ + SK+
Sbjct: 435 LDPDIHIYSIVMDGMCRAGELEAARDLFSKL 465
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 80/162 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L D C+ +L + + PD+ Y+ ++ G R L + DL ++
Sbjct: 409 ILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSK 468
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV +Y +++ L Q G EA+++F +M +P T+N++ G +N T A
Sbjct: 469 GLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRA 528
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
+++F+ + GF ++ T +L++ L G ++ + IL E
Sbjct: 529 IQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQILCEF 570
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 72/175 (41%), Gaps = 4/175 (2%)
Query: 217 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
+ + + +A +M+ IV ++ L+ + L +M+ G +
Sbjct: 30 LNVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNT 89
Query: 277 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
YT ILI+ C + A L + K+G+ + + ++ L +GKI A+ +F+
Sbjct: 90 YTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDK 149
Query: 337 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
M D TY ++++ LCK +A + L S + R ++D L
Sbjct: 150 MTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSL 204
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 171/329 (51%), Gaps = 1/329 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI ++C F +D G +L M I+P+VVT+++LI + L+ + DL +EM+ G
Sbjct: 306 LIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRG 365
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+ +YNSL++ L + DEAN++ M+ P T+NI++NG CK + D+ +
Sbjct: 366 IEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGM 425
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+FR + G + + VTY+ LI+G C++ +L A+ + +E+ G P +TY ++
Sbjct: 426 RLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGL 485
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N + + L IL M + D Y +I ++ +A + + GV+ DI
Sbjct: 486 CDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDI 545
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
SYN +++ CK L A L +M++ G+E D T+ LI + +I + +E
Sbjct: 546 QSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEE 605
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
M + GF S+ ++D L G++D +
Sbjct: 606 MKRCGFSSDASTVKIVMDMLSS-GELDKS 633
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 193/401 (48%), Gaps = 4/401 (0%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
+D + +M GI+ D+ T N +I R L + + ++ ++G P+ ++N+
Sbjct: 106 YDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNT 165
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
L++ L G+ EA + M+ P T N ++NGLC A+ + + +G
Sbjct: 166 LLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANG 225
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
P TY ++ +CK+G +A +L+++ P+ +TYT I+ ++ + L
Sbjct: 226 CQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDAL 285
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
S M+ KG + F Y ++I +F GR + + M+T + ++V+++ LI+
Sbjct: 286 SFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSL 345
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
KEGKL A L +EM +G E + T+ LI GLC + A ++ M G D ++
Sbjct: 346 VKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDI 405
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLS 367
YN +++ K ++D + +F M ++ D+ TYS+++ C++++L A K+
Sbjct: 406 WTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQE 465
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+ GV ++DGL +G EA I ++ K+
Sbjct: 466 MVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKM 506
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 183/390 (46%), Gaps = 4/390 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ + + +L +M I P VVTY +I ++ L +L EM G
Sbjct: 236 ILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKG 295
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I +V++YNSL+ G+ D+ ++ +DMI +TP TF+ +++ L K A
Sbjct: 296 IKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAK 355
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + G P +TYN LI GLC RL A ++ + G P+ TY ++
Sbjct: 356 DLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGF 415
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ G+ + M +G D Y T+I F + +L A ++MV+ GV I
Sbjct: 416 CKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGI 475
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y L++ C G+LE A +LD+M K E D + I+I G+C A + A
Sbjct: 476 MTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCS 535
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G ++++YN ++ L K + A +F M+ D TY++++ +
Sbjct: 536 LPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGND 595
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ ++ +L+ + G S K V+D L
Sbjct: 596 ITTSVQLIEEMKRCGFSSDASTVKIVMDML 625
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 204/443 (46%), Gaps = 39/443 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ +C+ ++ + ++ + G P+ VT+N+L+ G + +++L+D M+
Sbjct: 130 IMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLS 189
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PD+ + N++++ L + EA + M+ P T+ +LN +CK+ T +A
Sbjct: 190 QHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASA 249
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + R ++ P +VTY I+I LCK GRL A E+ G N TY +++
Sbjct: 250 LDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGS 309
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ G ++L M + T + + +I + VK G+L EA D +M+T G++ +
Sbjct: 310 FCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPN 369
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK-GARLH- 298
++YN+LI C + +L+ A ++D M +G + D +T+ ILI+G CKA + G RL
Sbjct: 370 TITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFR 429
Query: 299 ---------------------------------LEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+ M G + Y ++D L +G
Sbjct: 430 KMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNG 489
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+++ A+ + + M D Y+ ++H +C A ++ A L S GV+ +
Sbjct: 490 ELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYN 549
Query: 382 AVVDGLRHSGCRREAKKIQSKIR 404
++ GL EA + K++
Sbjct: 550 IMLSGLCKRSSLSEADALFRKMK 572
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 146/325 (44%), Gaps = 41/325 (12%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K D+A +FQ M+ P FN + L + + D L + + ++ G +L T N
Sbjct: 70 KKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLN 129
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKR 199
I+I C+ +L A + ++ G+ PN +T+ T++ C R ++ +E++ M
Sbjct: 130 IMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFE-AVELVDCMVL 188
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
+ D T++ R+ EA D + +M+ +G Q + +Y ++N CK G +
Sbjct: 189 SQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTAS 248
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN---- 315
A LL +ME + + T+TI+ID LCK G + A M G +N+ YN
Sbjct: 249 ALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIG 308
Query: 316 -------------------------------CIVDRLGKDGKIDHAINVFESMEVK---- 340
++D L K+GK+ A +++ M +
Sbjct: 309 SFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEP 368
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLL 365
++ TY+S+++ LC KRL A++++
Sbjct: 369 NTITYNSLIYGLCNDKRLDEANQMM 393
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 139/290 (47%), Gaps = 4/290 (1%)
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
D+A+ +F+ + + +P ++ +N L L + + + K++ G A + T +
Sbjct: 72 DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ C R RK + + + GY + + T++ GR+ EA + ++ MV
Sbjct: 132 INCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQH 191
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
D+++ NT++N C + ++ A L+ M G + +++T+ +++ +CK+GN A
Sbjct: 192 VPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALD 251
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 353
L M ++ Y I+D L KDG++D A++ F ME K + FTY+S++ + C
Sbjct: 252 LLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFC 311
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
R ++LL + + A++D L G EAK + +++
Sbjct: 312 SFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEM 361
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 105/206 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ D G + +M G+ D VTY++LI G ++ L + + EM+
Sbjct: 410 ILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQ 469
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P + +Y L+ L G+ +EA + M + +NI+++G+C D+A
Sbjct: 470 GVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDA 529
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F L G ++ +YNI++ GLCK L A + +++ + G+ P+ TY T+++
Sbjct: 530 WSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRA 589
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDG 206
R ++++ MKR G++ D
Sbjct: 590 HLRGNDITTSVQLIEEMKRCGFSSDA 615
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ C+ S + +M+E G PD TYN+LI R + ++ S+ L++EM
Sbjct: 550 IMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRC 609
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 95
G D + +M L E ++ F +M+ G
Sbjct: 610 GFSSDASTVKIVMDML----SSGELDKSFLNMLSG 640
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 171/335 (51%), Gaps = 4/335 (1%)
Query: 34 YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
Y SLI N +L + + EMG+ V+S NSL+ LG +E V++ M
Sbjct: 147 YVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMK 206
Query: 94 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 153
+ P ++N ++NGL +++ ++A R+F ++ P++VTYN +IKG C+ G+ R
Sbjct: 207 ENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTR 266
Query: 154 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
A LK + AP+ ITY T+++ C+ + L + M KG Y VI
Sbjct: 267 KAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVI 326
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
K G+ E E M++ G + ++ Y LI+ K G + A LL M+K+G E
Sbjct: 327 GGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLE 386
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
D+ T+ ++++ LCK+G + A ++E+ + G N Y+ ++D LGK G++D A +
Sbjct: 387 PDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERI 446
Query: 334 FESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
F M K DS+ Y++++ L K ++ A L
Sbjct: 447 FYEMVKKGCPPDSYCYNALIDALAKCGKIDEALAL 481
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 174/408 (42%), Gaps = 43/408 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I YC+ + L M ++PD +TY +LI L L EM E G
Sbjct: 255 MIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKG 314
Query: 62 --IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
IPP V+S ++ L + GK E VF++MI A + +++ K
Sbjct: 315 LEIPPHVYSL--VIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGE 372
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+ +F+ ++K G P+ VTY +++ LCK+GRL A ++ G A NA+ Y++++
Sbjct: 373 AMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLI- 431
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
DG G K GR+ EA +MV G
Sbjct: 432 -------------------------DGLG---------KSGRVDEAERIFYEMVKKGCPP 457
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D YN LI+ K GK++ A L ME G + YT+TILI GL + + A
Sbjct: 458 DSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLW 517
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYSSMVHNLCKAK 356
+ M G A+ + L GK+ A + + M V + M++ LCKA
Sbjct: 518 DLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIPETAFDDMINILCKAG 577
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI-QSKI 403
R+ A KL + G I + +++ LR +G A K+ +SKI
Sbjct: 578 RIKEACKLADGIVDRGREIPGRVRTVLINALRKAGNADLALKLMRSKI 625
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 144/312 (46%), Gaps = 9/312 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I C+ GYT+ M G +V Y +LI + + ++ L M +
Sbjct: 324 LVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKE 383
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF-NIMLNGLCKNRYTDN 119
G+ PD +Y +++ L + G+ DEA + + G A F + +++GL K+ D
Sbjct: 384 GLEPDEVTYGVIVNSLCKSGRLDEALE-YMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDE 442
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A R+F + K G P+ YN LI L K G++ A + K + G TYT ++
Sbjct: 443 AERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILIT 502
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
FR + + L + M KG T + + G++ A +++M GV +
Sbjct: 503 GLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGV-I 561
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+++ +IN+ CK G+++ A L D + +G E T+LI+ L KAGN A L L
Sbjct: 562 PETAFDDMINILCKAGRIKEACKLADGIVDRGREIPGRVRTVLINALRKAGN---ADLAL 618
Query: 300 EYMNK---IGFD 308
+ M IG+D
Sbjct: 619 KLMRSKIGIGYD 630
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 4/205 (1%)
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
A K+K YT + Y ++I G L + G+ + + S N+LI + G
Sbjct: 134 AGKQKKYTHNLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLG 193
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
+E + M++ G E +++ L++GL + I+ A E M ++ YN
Sbjct: 194 MVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYN 253
Query: 316 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++ + GK A ++ME++ D TY +++ S L +
Sbjct: 254 TMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEK 313
Query: 372 GVRILKSAQKAVVDGLRHSGCRREA 396
G+ I V+ GL G R E
Sbjct: 314 GLEIPPHVYSLVIGGLCKDGKRVEG 338
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 192/379 (50%), Gaps = 18/379 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C+ + +L RM+E G PD YN+LI+G ++ + L EM++
Sbjct: 47 ILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKN 106
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P V +Y +++ L + + +A ++ +M +P T+N+++ GLC+ R D A
Sbjct: 107 HCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEA 166
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+M + G+ P++VTYN IKGLCK R+ AR L + + P+ ++YTT++
Sbjct: 167 KKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT---PDVVSYTTVING 223
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ +L M +G T D Y ++I F K G ++ A ++ M+ G + +
Sbjct: 224 LCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPN 283
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YN+L+ + G + A +L EME++GF D ++ IDGLCKA +K A+ +
Sbjct: 284 MVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFD 343
Query: 301 YMNKIGFDSNLEAYNCIV----------DRLGKDGKIDHAINVF-----ESMEVKDSFTY 345
M + G N +Y+ ++ D L K G+ D A +F E + D F Y
Sbjct: 344 RMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFY 403
Query: 346 SSMVHNLCKAKRLPSASKL 364
+ M+ + CK +++ A ++
Sbjct: 404 NVMLDSHCKRRQIDKALQI 422
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 192/397 (48%), Gaps = 17/397 (4%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G +V TYN L+ TR + + EM++ PD +++ L+ L + + ++A
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
++ M P A +N +++G K + A + + K+ +P +VTY ++ G
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCKA R R A +L E+ D G +PN TY I++ RK ++L M +GY D
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y + I K R+ EA ++ +M V D+VSY T+IN CK G L++A +LD
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLD 238
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M +G D T++ LIDG CK G ++ A L+ M K+G N+ AYN ++ L + G
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLG 298
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
I A ++ ME D +Y++ + LCKA+R+ A + ++ G S+
Sbjct: 299 HIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYS 358
Query: 382 AVV----------DGLRHSGCRREAKKIQSKIRMAKI 408
++ DGL G EA + SK+ KI
Sbjct: 359 MLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKI 395
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 195/385 (50%), Gaps = 17/385 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI Y + F + L M + P VVTY +++ G + ++ LLDEM + G
Sbjct: 83 LISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKG 142
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P++++YN ++ L + K DEA ++ ++M P T+N + GLCK D A
Sbjct: 143 CSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEA- 201
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R F L + P++V+Y +I GLCK+G L +A +L + + G P+ +TY++++
Sbjct: 202 RKF--LARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGF 259
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + + +L +M + G + Y +++ A ++G + +A D + +M G D+
Sbjct: 260 CKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDV 319
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQG----------FECDKYTHTILIDGLCKAGN 291
VSYN I+ CK +++ A + D M ++G D +T+L+DGLCK G
Sbjct: 320 VSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGR 379
Query: 292 IKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS---FTYSS 347
A L + +++ + ++ YN ++D K +ID A+ + + M K+ T++
Sbjct: 380 FDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNVVTWNI 439
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSG 372
+VH LC RL A +LL+ + G
Sbjct: 440 LVHGLCVDDRLSDAETMLLTMVDEG 464
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 199/418 (47%), Gaps = 21/418 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D C+ +L+ MR+ G SP++ TYN ++ G L + +L+EM G
Sbjct: 118 IVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRG 177
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV +YNS + L + + DEA + M +TP ++ ++NGLCK+ D+A
Sbjct: 178 YFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSAS 234
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
RM + G P++VTY+ LI G CK G + A +L + G PN + Y +++
Sbjct: 235 RMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGAL 294
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ--- 238
R ++L M+R+G+T D Y I K R+K+A ++MV G
Sbjct: 295 HRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNA 354
Query: 239 -------LDIVSYNTLINLYCKEGKLEAAYLLLDE-MEKQGFECDKYTHTILIDGLCKAG 290
+DI+ Y L++ CK G+ + A L + ++++ E D + + +++D CK
Sbjct: 355 SSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRR 414
Query: 291 NI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 345
I K ++H + + K N+ +N +V L D ++ A + +M + D TY
Sbjct: 415 QIDKALQIHKQMLEKNC--CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTY 472
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++V +CK + +A +L +K G A++ GL H EA + +K+
Sbjct: 473 GTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL 530
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 144/326 (44%), Gaps = 45/326 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ D+ +L+ M G +PDVVTY+SLI G + + ++ LLD ML++G
Sbjct: 220 VINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLG 279
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P++ +YNSL+ L +LG +A + +M TP ++N ++GLCK A
Sbjct: 280 CRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAK 339
Query: 122 RMFRGLQKHGFVP----------ELVTYNILIKGLCKAGRLRTARWIL-KELGDSGHAPN 170
+F + + G P +++ Y +L+ GLCK GR A + K L + P+
Sbjct: 340 AVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPD 399
Query: 171 AITYTTIMKCCFRNRKYKLGLEI----------------------------------LSA 196
Y ++ + R+ L+I L
Sbjct: 400 VFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLT 459
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M +G+ D Y T++ A K G+ A + E+ V G D+V+Y+ LI E
Sbjct: 460 MVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENM 519
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTIL 282
E AYLL ++ ++ + D T +L
Sbjct: 520 AEEAYLLFTKLVERRWVPDDKTLGLL 545
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 1/158 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D++C+ D I +M E +VVT+N L+ G + LS + +L M++
Sbjct: 405 VMLDSHCKRRQIDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDE 463
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD +Y +L+ + + GK A +F++ + G P T++ ++ GL + A
Sbjct: 464 GFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEA 523
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 158
+F L + +VP+ T +L + L + R A +
Sbjct: 524 YLLFTKLVERRWVPDDKTLGLLHRKLKLLNKPRKAEVV 561
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 2/174 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGI-SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
+L+D C+ FD + +++ + I PDV YN ++ + + +L + +MLE
Sbjct: 369 VLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLE 428
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+V ++N L+H L + +A + M+ P T+ +++ +CK +
Sbjct: 429 KNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAA 487
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
AL +F K G VP++VTY+ LI GL A + +L + P+ T
Sbjct: 488 ALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKT 541
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 166/317 (52%), Gaps = 10/317 (3%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
E+ + P V + N+L+ +LG +E V++ M + P T+N ++NGL
Sbjct: 159 EIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAM 218
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
+ D+A R+F ++ P++VTYN +IKG CKAG+ + A L+++ GH + ITY
Sbjct: 219 FVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYM 278
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T+++ C+ + + + + M KG + VI K G+L E E M+
Sbjct: 279 TMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRK 338
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G + ++ Y LI+ Y K G +E A LL M +GF+ D T++++++GLCK G ++ A
Sbjct: 339 GSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA 398
Query: 296 RLHLEYMNKIGFDS---NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 348
L+Y + FD N Y+ ++D LGK G++D A +FE M K DS+ Y+++
Sbjct: 399 ---LDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNAL 455
Query: 349 VHNLCKAKRLPSASKLL 365
+ K +++ A L
Sbjct: 456 IDAFTKHRKVDEAIALF 472
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 168/384 (43%), Gaps = 6/384 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D+ + M I PD+VTYN++I G + +++ L +M G D +Y ++
Sbjct: 221 DSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTM 280
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ + ++Q+M + F++++ GLCK + +F + + G
Sbjct: 281 IQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS 340
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P + Y +LI G K+G + A +L + D G P+ +TY+ ++ +N + + L+
Sbjct: 341 KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALD 400
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ G + Y ++I K GR+ EA E+M G D YN LI+ +
Sbjct: 401 YFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFT 460
Query: 253 KEGKLEAAYLLLDEMEKQGFECDK--YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
K K++ A L ME++ CD+ YT+TIL+ G+ K + A + M G
Sbjct: 461 KHRKVDEAIALFKRMEEEE-GCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPT 519
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFES---MEVKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
+ + L GK+ A + + M V M++ LCKA R+ A KL
Sbjct: 520 AACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADG 579
Query: 368 CLKSGVRILKSAQKAVVDGLRHSG 391
+ G + + +++ LR G
Sbjct: 580 ITERGREVPGRIRTVMINALRKVG 603
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 144/308 (46%), Gaps = 6/308 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I C+ + GYT+ M G P+V Y LI G ++ + ++ LL M++
Sbjct: 314 LVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE 373
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +Y+ +++ L + G+ +EA F L + ++ +++GL K D A
Sbjct: 374 GFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEA 433
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL-GDSGHAPNAITYTTIMK 179
R+F + + G + YN LI K ++ A + K + + G TYT ++
Sbjct: 434 ERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLS 493
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
F+ + + L++ M KG T + + G++ A ++++ GV L
Sbjct: 494 GMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVIL 553
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D + +IN CK G+++ A L D + ++G E T++I+ L K G A L +
Sbjct: 554 D-AACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGK---ADLAM 609
Query: 300 EYM-NKIG 306
+ M +KIG
Sbjct: 610 KLMHSKIG 617
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 188/403 (46%), Gaps = 4/403 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+++C + +++L ++ + G PD ++ +LI G + +L L D+M+
Sbjct: 114 VLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWE 173
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV Y +L++ L + G A R+ + M G+ P + +++ LCK+R A
Sbjct: 174 GFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQA 233
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G P +VT N L+ LC G + +L E+ DS PNAI+ TT++
Sbjct: 234 FNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDA 293
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ +++ M + G D Y +I + EA + MV G +
Sbjct: 294 LCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPN 353
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ SYNTLIN YCK +++ A L +EM +Q + T+ LI GLC G ++ A
Sbjct: 354 VFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFR 413
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M G +L Y ++D L K+ +D A+ + +++E D Y+ ++ +C+A
Sbjct: 414 EMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAG 473
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L A L + G++ + GL G EA K+
Sbjct: 474 ELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKL 516
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 186/412 (45%), Gaps = 5/412 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ A +L M + PDVV Y +LI ++ + + +L EM+ G
Sbjct: 185 LINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKG 244
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P++ + NSL++ L LG+ N + +M+ + P + +++ LCK A
Sbjct: 245 ISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAH 304
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P++VTY LI G C + A + + G APN +Y T++
Sbjct: 305 DVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGY 364
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + + M R+ + Y T+I +GRL++A +MV G D+
Sbjct: 365 CKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDL 424
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y L++ CK L+ A LL +E + D +TI+IDG+C+AG ++ AR
Sbjct: 425 VTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSN 484
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
++ G N+ YN + L K G +D A +F M+ D TY+++ +
Sbjct: 485 LSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNE 544
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC-RREAKKIQSKIRMAKI 408
A +LL L G S +V L G + EA K++ +I
Sbjct: 545 TSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMFPHLRI 596
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 174/371 (46%), Gaps = 4/371 (1%)
Query: 6 YCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD 65
Y F + D + NRM P +V + ++ T+ S L L +M GIP +
Sbjct: 49 YLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHN 108
Query: 66 VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 125
V++ N L++ L + + A V ++ P TA+F ++ GLC AL +F
Sbjct: 109 VYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFD 168
Query: 126 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 185
+ GF P++V Y LI GLCK G A +L+ + P+ + Y T++ ++R
Sbjct: 169 KMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDR 228
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
+ + S M KG + + +++ A +G K + +MV + + +S
Sbjct: 229 QQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLT 288
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
T+++ CKEG + A+ ++D M + G E D T+T LIDG C + A + M
Sbjct: 289 TVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHK 348
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSA 361
G N+ +YN +++ K ++D A+ +FE M + ++ TY++++H LC RL A
Sbjct: 349 GCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDA 408
Query: 362 SKLLLSCLKSG 372
L + G
Sbjct: 409 IALFREMVACG 419
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 183/387 (47%), Gaps = 4/387 (1%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
+M GI +V T N LI + ++ + +L ++L++G PD S+ +L+ L G
Sbjct: 99 KMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEG 158
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
+ EA +F MI P + ++NGLCK +T A+R+ R ++K P++V Y
Sbjct: 159 QIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYG 218
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
LI LCK + A + E+ G +PN +T +++ ++K +L+ M
Sbjct: 219 TLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDS 278
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
+ TV+ A K G + +A D ++ M GV+ D+V+Y LI+ +C +++ A
Sbjct: 279 KIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEA 338
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
+ D M +G + +++ LI+G CK + A E M + N YN ++
Sbjct: 339 VKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHG 398
Query: 321 LGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
L G++ AI +F M ++ D TY ++ LCK L A LL + S +
Sbjct: 399 LCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPD 458
Query: 377 KSAQKAVVDGLRHSGCRREAKKIQSKI 403
V+DG+ +G +A+ + S +
Sbjct: 459 IQIYTIVIDGMCRAGELEDARDLFSNL 485
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ D +L + + + PD+ Y +I G R L + DL +
Sbjct: 429 ILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSK 488
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA---TFNIMLNGLCKNRYT 117
G+ P+VW+YN + H L + G DEA ++F +M D C+A T+N + G +N T
Sbjct: 489 GLKPNVWTYNIMTHGLCKRGLLDEATKLFMEM---DENACSADGCTYNTITQGFLRNNET 545
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 150
A+++ + GF ++ T +L+ L G
Sbjct: 546 SRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDG 578
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 190/411 (46%), Gaps = 4/411 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ A C+ + D L +M G+ PD TYN+LI G + ++ + EM
Sbjct: 262 VVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS 321
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV + N+LM L + GK EA VF M P ++ IMLNG +
Sbjct: 322 ILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMT 381
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + G P + T+N+LIK G L A I E+ D G P+ +TY T++
Sbjct: 382 DLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAAL 441
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R K +E + M +G D + Y +I F G L +A + + +++ +G++LDI
Sbjct: 442 CRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDI 501
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V + ++IN CK G++ A + D G D + +L+DG C G ++ A +
Sbjct: 502 VFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDA 561
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G + N+ Y +V+ K G+ID +++F M K + Y+ ++ L +A R
Sbjct: 562 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 621
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
A +SG+ + K V+ GL + C EA + ++R +
Sbjct: 622 TVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNV 672
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 176/392 (44%), Gaps = 7/392 (1%)
Query: 2 LIDAYCQFVSFDAGYTIL-NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L+ +C+ D IL +R E G PDV +YN L+ + DLL M E
Sbjct: 154 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEG 213
Query: 61 GI--PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G PDV +YN+++ F+ G ++A +F++M+ + P T++ +++ LCK R D
Sbjct: 214 GTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMD 273
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A R + G +P+ TYN LI G G+ + A + KE+ P+ + T+M
Sbjct: 274 KAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLM 333
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ K K ++ M KG D F Y ++ + G L + TD + M+ DG+
Sbjct: 334 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIA 393
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
I ++N LI Y G L+ A ++ +EM G + T+ +I LC+ G + A
Sbjct: 394 PVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
M G + AY+C++ G + A + + D + S+++NLCK
Sbjct: 454 FNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCK 513
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
R+ A + + G+ ++DG
Sbjct: 514 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDG 545
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 144/306 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C S +++ + G+ D+V + S+I + + + ++ D + +G
Sbjct: 472 LIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVG 531
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD YN LM +GK ++A RVF M+ + P + ++NG CK D L
Sbjct: 532 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGL 591
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + + G P + YNI+I GL +AGR A+ E+ +SG A N TY+ +++
Sbjct: 592 SLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGL 651
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+NR + + + ++ D T+IA + R++EA D + G+
Sbjct: 652 FKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCA 711
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y+ +I KEG +E A + M+ G E D ++ L K I A +L
Sbjct: 712 VTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSK 771
Query: 302 MNKIGF 307
+++ F
Sbjct: 772 IDERNF 777
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 163/391 (41%), Gaps = 42/391 (10%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEML---------------------------- 58
+SP TY L+ TR +L ++L
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168
Query: 59 --------EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL--TPCTATFNIML 108
E+G PDV+SYN L+ L GK +A+ + + M G +P +N ++
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228
Query: 109 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
+G K + A +F+ + + G P+LVTY+ ++ LCKA + A L+++ + G
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
P+ TY ++ ++K + + M+R+ D T++ + K G++KEA D
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+ M G D+ SY ++N Y +G L L D M G T +LI
Sbjct: 349 FDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYAN 408
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFT 344
G + A + M G ++ Y ++ L + GK+D A+ F M V D +
Sbjct: 409 CGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYA 468
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
Y ++ C L A +L+ + +G+R+
Sbjct: 469 YHCLIQGFCTHGSLLKAKELISEIMNNGMRL 499
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 176/407 (43%), Gaps = 5/407 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI AY D I N MR+ G+ P VVTY ++IA R + +++ ++M++
Sbjct: 401 VLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQ 460
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD ++Y+ L+ G +A + +++ + F ++N LCK +A
Sbjct: 461 GVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDA 520
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F G P+ V YN+L+ G C G++ A + + +G PN + Y T++
Sbjct: 521 QNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNG 580
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + GL + M +KG Y +I + GR A +M G+ ++
Sbjct: 581 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMN 640
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y+ ++ K + A L E+ + D T +I G+ + ++ A+
Sbjct: 641 KCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFA 700
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+++ G Y+ ++ L K+G ++ A ++F SM+ DS + +V L K
Sbjct: 701 SISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKN 760
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG-CRREAKKIQSK 402
+ A L + + +VD G CR + + + +K
Sbjct: 761 EIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFLPAK 807
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 96/244 (39%), Gaps = 34/244 (13%)
Query: 168 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
+P + TY +M CC R + +L L + R G D ++ F + R EA D
Sbjct: 110 SPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALD 169
Query: 228 YMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHTILID 284
+ + G D+ SYN L+ C +GK A LL M + G C D + +ID
Sbjct: 170 ILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVID 229
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT 344
G K G++ A + M + G +L T
Sbjct: 230 GFFKEGDVNKACDLFKEMVQRGIPPDL-------------------------------VT 258
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
YSS+VH LCKA+ + A L + GV ++ G +G +EA ++ ++R
Sbjct: 259 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMR 318
Query: 405 MAKI 408
I
Sbjct: 319 RQSI 322
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 166/317 (52%), Gaps = 10/317 (3%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
E+ + P V + N+L+ +LG +E V++ M + P T+N ++NGL
Sbjct: 177 EIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAM 236
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
+ D+A R+F ++ P++VTYN +IKG CKAG+ + A L+++ GH + ITY
Sbjct: 237 FVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYM 296
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T+++ C+ + + + + M KG + VI K G+L E E M+
Sbjct: 297 TMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRK 356
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G + ++ Y LI+ Y K G +E A LL M +GF+ D T++++++GLCK G ++ A
Sbjct: 357 GSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA 416
Query: 296 RLHLEYMNKIGFDS---NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 348
L+Y + FD N Y+ ++D LGK G++D A +FE M K DS+ Y+++
Sbjct: 417 ---LDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNAL 473
Query: 349 VHNLCKAKRLPSASKLL 365
+ K +++ A L
Sbjct: 474 IDAFTKHRKVDEAIALF 490
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 168/384 (43%), Gaps = 6/384 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D+ + M I PD+VTYN++I G + +++ L +M G D +Y ++
Sbjct: 239 DSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTM 298
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ + ++Q+M + F++++ GLCK + +F + + G
Sbjct: 299 IQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS 358
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P + Y +LI G K+G + A +L + D G P+ +TY+ ++ +N + + L+
Sbjct: 359 KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALD 418
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ G + Y ++I K GR+ EA E+M G D YN LI+ +
Sbjct: 419 YFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFT 478
Query: 253 KEGKLEAAYLLLDEMEKQGFECDK--YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
K K++ A L ME++ CD+ YT+TIL+ G+ K + A + M G
Sbjct: 479 KHRKVDEAIALFKRMEEEE-GCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPT 537
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFES---MEVKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
+ + L GK+ A + + M V M++ LCKA R+ A KL
Sbjct: 538 AACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADG 597
Query: 368 CLKSGVRILKSAQKAVVDGLRHSG 391
+ G + + +++ LR G
Sbjct: 598 ITERGREVPGRIRTVMINALRKVG 621
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 144/308 (46%), Gaps = 6/308 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I C+ + GYT+ M G P+V Y LI G ++ + ++ LL M++
Sbjct: 332 LVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE 391
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +Y+ +++ L + G+ +EA F L + ++ +++GL K D A
Sbjct: 392 GFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEA 451
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL-GDSGHAPNAITYTTIMK 179
R+F + + G + YN LI K ++ A + K + + G TYT ++
Sbjct: 452 ERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLS 511
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
F+ + + L++ M KG T + + G++ A ++++ GV L
Sbjct: 512 GMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVIL 571
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D + +IN CK G+++ A L D + ++G E T++I+ L K G A L +
Sbjct: 572 D-AACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGK---ADLAM 627
Query: 300 EYM-NKIG 306
+ M +KIG
Sbjct: 628 KLMHSKIG 635
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 184/375 (49%), Gaps = 3/375 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+F A ++ M G+ P T+ SLI+G ++ + + L ++M++ G
Sbjct: 441 LINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNG 500
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V+++ +L+ L K EA+ +F +++ + P T+N+++ G C++ D A
Sbjct: 501 ITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAF 560
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G VP+ TY LI GLC GR+ A+ + +L N + Y+ ++
Sbjct: 561 ELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGY 620
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + L M ++G D + +I +K K D ++ M G++ D
Sbjct: 621 CQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDN 680
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V Y ++I+ Y KEG + A+ D M + + T+T L++GLCKAG + A L +
Sbjct: 681 VIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKR 740
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDSFTYSSMVHNLCKAKRL 358
M N Y C +D L K+G + AI + +M + ++ T++ ++ CK R
Sbjct: 741 MQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANTVTHNIIIRGFCKLGRF 800
Query: 359 PSASKLLLSCLKSGV 373
A+K+L ++G+
Sbjct: 801 HEATKVLSEMTENGI 815
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 189/399 (47%), Gaps = 4/399 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI++ C+ D + + M + P+ +TY+ LI R+ L ++ D M++ G
Sbjct: 371 LINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDG 430
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I V++YNSL++ + G A +F +M + P TF +++G CK+ A
Sbjct: 431 IGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAF 490
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + +G P + T+ LI GLC ++ A + EL + P +TY +++
Sbjct: 491 KLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGY 550
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ K E+L M +KG D + Y +I+ GR+ +A D+++ + V+L+
Sbjct: 551 CRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNE 610
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ Y+ L++ YC+EG+L A EM ++G D H +LIDG K + K L+
Sbjct: 611 MCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKD 670
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKR 357
M+ G + Y ++D K+G A ++ M ++ F TY+++++ LCKA
Sbjct: 671 MHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGE 730
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ A L + V +D L G +EA
Sbjct: 731 MDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEA 769
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 177/331 (53%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ +C+ F+AG +++ M E G SP + L+ G + + + +L+ ++ G
Sbjct: 301 LVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFG 360
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+++ YN+L++ L + G D+A ++ +M +L P T++I+++ C++ D A+
Sbjct: 361 FVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAI 420
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F + + G + YN LI G CK G L A + E+ + G P A T+T+++
Sbjct: 421 SYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGY 480
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + + ++ + M G T + + + +I+ ++ EA++ +++V ++
Sbjct: 481 CKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTE 540
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN LI YC++GK++ A+ LL++M ++G D YT+ LI GLC G + A+ ++
Sbjct: 541 VTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDD 600
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
++K N Y+ ++ ++G++ A++
Sbjct: 601 LHKQNVKLNEMCYSALLHGYCQEGRLMEALS 631
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 188/418 (44%), Gaps = 9/418 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ + C+ F + M G +VTYN LI G + +S ++++ + G
Sbjct: 231 VVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKG 290
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ DV +Y +L+ +L + + ++ +M+ +P A + +++GL K D+A
Sbjct: 291 LAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAY 350
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + GFVP L YN LI LCK G L A + + PN ITY+ ++
Sbjct: 351 ELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSF 410
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ + + + M + G + Y ++I K G L A +M GV+
Sbjct: 411 CRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTA 470
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++ +LI+ YCK+ +++ A+ L ++M G + YT T LI GLC + A +
Sbjct: 471 TTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDE 530
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ + YN +++ +DGKID A + E M V D++TY ++ LC R
Sbjct: 531 LVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGR 590
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA-----KKIQSKIRMAKISH 410
+ A + K V++ + A++ G G EA + IQ I M + H
Sbjct: 591 VSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCH 648
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 189/386 (48%), Gaps = 9/386 (2%)
Query: 34 YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
+N L+ +S + ++ ++ M + P+V + ++L++ L ++ K +F + +
Sbjct: 158 FNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESV 217
Query: 94 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 153
+ P T + ++ +C+ + A R ++ +GF +VTYN+LI GLCK R+
Sbjct: 218 NAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVS 277
Query: 154 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
A + + LG G A + +TY T++ R ++++ G++++ M G++ ++
Sbjct: 278 EAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLV 337
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
K G++ +A + + ++ G ++ YN LIN CK G L+ A LL M
Sbjct: 338 DGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLR 397
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
+ T++ILID C++G + A + + M + G + AYN +++ K G + A ++
Sbjct: 398 PNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESL 457
Query: 334 FESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
F M K + T++S++ CK ++ A KL + +G+ A++ GL
Sbjct: 458 FIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCS 517
Query: 390 SGCRREAKK-----IQSKIRMAKISH 410
+ EA + ++ KI+ ++++
Sbjct: 518 TNKMAEASELFDELVERKIKPTEVTY 543
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 142/330 (43%), Gaps = 36/330 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ D + +L M + G+ PD TY LI+G +S + D +D++ +
Sbjct: 545 VLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQ 604
Query: 61 GIPPDVWSYNSLMHCLFQLGK---------------------------------PDEAN- 86
+ + Y++L+H Q G+ PD
Sbjct: 605 NVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTF 664
Query: 87 -RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+ +DM L P + M++ K A + + P +VTY L+ G
Sbjct: 665 FDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNG 724
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCKAG + A + K + + PN+ITY + + K + + AM KG +
Sbjct: 725 LCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAM-LKGLLAN 783
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ +I F K+GR EAT + +M +G+ D V+Y+TLI YC+ G + A+ L D
Sbjct: 784 TVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWD 843
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
M +G E D + +LI G C G + A
Sbjct: 844 TMLNRGLEPDLVAYNLLIYGCCVNGELDKA 873
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 128/274 (46%), Gaps = 1/274 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ YCQ + M + GI+ D+V + LI GA + DLL +M + G
Sbjct: 616 LLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQG 675
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD Y S++ + G +A + M+ + P T+ ++NGLCK D A
Sbjct: 676 LRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAG 735
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ +Q P +TY + L K G ++ A + + G N +T+ I++
Sbjct: 736 LLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAML-KGLLANTVTHNIIIRGF 794
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ ++LS M G D Y T+I + + G + + + M+ G++ D+
Sbjct: 795 CKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDL 854
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
V+YN LI C G+L+ A+ L D+M ++G D
Sbjct: 855 VAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 149/325 (45%), Gaps = 5/325 (1%)
Query: 67 WSYNSLMHCLF-QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 125
W NSL+H L + P F D T FN+++ + +A+ + +
Sbjct: 120 WPANSLLHTLLLRESHPKCVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVK 179
Query: 126 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 185
+ + +PE+ T + L+ GL K + T + E ++G P+ T + +++ +
Sbjct: 180 LMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELK 239
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
+ E + M+ G+ Y +I K R+ EA + + G+ D+V+Y
Sbjct: 240 DFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYC 299
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
TL+ +C+ + EA L+DEM + GF + + L+DGL K G I A + + +
Sbjct: 300 TLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRF 359
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSA 361
GF NL YN +++ L K G +D A ++ +M + + TYS ++ + C++ RL A
Sbjct: 360 GFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVA 419
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDG 386
++ G+ A ++++G
Sbjct: 420 ISYFDRMIQDGIGETVYAYNSLING 444
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I +C+ F +L+ M E GI PD VTY++LI R+ + S+ L D ML
Sbjct: 789 IIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNR 848
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTP 99
G+ PD+ +YN L++ G+ D+A + DM+ + P
Sbjct: 849 GLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIP 887
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 185/368 (50%), Gaps = 9/368 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ Y + S + + R+ E G P V YN L+ + L M + G
Sbjct: 115 IINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDG 174
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V++YN L+ L + + D A+++F +M P T+ M++ LCK D+A
Sbjct: 175 LIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA- 233
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R G F P + YN LI G+CK GR+ A +L E+ D+G PN ++Y+ I+
Sbjct: 234 RELAG----RFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSL 289
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +L + + M +G + + +I G+L EA D + M+ DG + ++
Sbjct: 290 CVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNV 349
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTLI+ C G LE A + D+M++ G + T++ILIDG K+G++ GA
Sbjct: 350 VAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNR 409
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G N+ Y C+VD L K+ D A ++ E M ++ ++ T+++ + LC R
Sbjct: 410 MISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGR 469
Query: 358 LPSASKLL 365
+ A KLL
Sbjct: 470 VEWAMKLL 477
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 148/311 (47%), Gaps = 5/311 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M + G P+VV YN+LI G N L +L + D+M G P+V +Y+ L+ + G
Sbjct: 340 MIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGD 399
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
A+ + MI P T+ M++ LCKN D A + + G P +T+N
Sbjct: 400 LVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNT 459
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
IKGLC GR+ A +L+ + G PN TY ++ FR KY+ + ++ +
Sbjct: 460 FIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARN 519
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ Y TV+ F + G + EA + + G D ++YNT+I+ YCK+GK++ A
Sbjct: 520 LQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAA 579
Query: 262 LLLDEMEK-QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN----C 316
L++ + + + D T+T LI G C NI+ A L+ G N +N C
Sbjct: 580 QLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRC 639
Query: 317 IVDRLGKDGKI 327
D LG G I
Sbjct: 640 FFDSLGHMGPI 650
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 195/441 (44%), Gaps = 48/441 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+DA F + M++ G+ P+V TYN L+ +N + + L EM G
Sbjct: 150 LLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKG 209
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PPD +Y +++ L + GK D+A + G P +N +++G+CK + A+
Sbjct: 210 CPPDAVTYTTMVSSLCKAGKIDDARE-----LAGRFKPSVPVYNALIDGMCKEGRIEVAI 264
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAG------------------------------- 150
++ + +G P +V+Y+ +I LC +G
Sbjct: 265 KLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGC 324
Query: 151 ----RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
+L A + K + G PN + Y T++ N + L++ M+R G +
Sbjct: 325 FMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNV 384
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I F K G L A++ +M++ G + ++V+Y ++++ CK + A L+++
Sbjct: 385 TTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEK 444
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M +G + T I GLC G ++ A LE M G N+ YN ++D L + K
Sbjct: 445 MTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNK 504
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+ A +F+ +E + + TY+++++ +A + A +L L G +
Sbjct: 505 YEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGT----APDSI 560
Query: 383 VVDGLRHSGCRREAKKIQSKI 403
+ + H+ C++ KI +++
Sbjct: 561 TYNTMIHAYCKQGKVKIAAQL 581
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 180/400 (45%), Gaps = 11/400 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ + +L M + G+ P+VV+Y+ +I + + + L +M G
Sbjct: 250 LIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG 309
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
++ ++ L+ F GK EA +++ MI P +N +++GLC N + AL
Sbjct: 310 CDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEAL 369
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ +Q+ G +P + TY+ILI G K+G L A + G PN +TYT ++
Sbjct: 370 QVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVL 429
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N + ++ M +G T + + T I GR++ A +E+M G +I
Sbjct: 430 CKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNI 489
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN L++ + K E A+ L E+E + + + T+ ++ G +AG + G L L
Sbjct: 490 TTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAG-MMGEALQLFG 548
Query: 302 MNKI-GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV-----KDSFTYSSMVHNLCKA 355
+ G + YN ++ K GK+ A + E + D TY+S++ C
Sbjct: 549 KALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNW 608
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVV----DGLRHSG 391
+ A L + G+ + A+V D L H G
Sbjct: 609 MNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMG 648
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 143/314 (45%), Gaps = 11/314 (3%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
D + Q M + C F ++NG + + AL+MF + + G P + YN L
Sbjct: 91 DMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHL 150
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
+ L + + + + G PN TY ++K +N + ++ M KG
Sbjct: 151 LDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGC 210
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
D Y T++++ K G++ +A + + + + YN LI+ CKEG++E A
Sbjct: 211 PPDAVTYTTMVSSLCKAGKIDDARE-----LAGRFKPSVPVYNALIDGMCKEGRIEVAIK 265
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
LL EM G + + +++ +I+ LC +GN++ A M G D+N+ + ++
Sbjct: 266 LLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCF 325
Query: 323 KDGKIDHAINVFESMEVKDS-----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
GK+ A+++++ M ++D Y++++H LC L A ++ +SG
Sbjct: 326 MRGKLYEALDLWKLM-IQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNV 384
Query: 378 SAQKAVVDGLRHSG 391
+ ++DG SG
Sbjct: 385 TTYSILIDGFAKSG 398
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 136/308 (44%), Gaps = 40/308 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C S + + ++M+ +G P+V TY+ LI G ++ L + + + M+ G
Sbjct: 355 LIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +Y ++ L + D+AN + + M TP T TFN + GLC N + A+
Sbjct: 415 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAM 474
Query: 122 RMFRGLQKHG-----------------------------------FVPELVTYNILIKGL 146
++ +Q HG P LVTYN ++ G
Sbjct: 475 KLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGF 534
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG---LEILSAMKRKGYT 203
+AG + A + + G AP++ITY T++ + K K+ +E +S+MK +
Sbjct: 535 SRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKE--WH 592
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y ++I ++EA ++++ + G+ + ++N L+ + +
Sbjct: 593 PDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHI 652
Query: 264 LDEMEKQG 271
LD++ ++G
Sbjct: 653 LDDILRKG 660
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 194/409 (47%), Gaps = 44/409 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I Y F+ Y +L R+RE G P VV++NS++ + + +L L E+++
Sbjct: 191 MIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKD 249
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +YN ++ L G+ +EA R+ +M L P T NIM++ LCK R + A
Sbjct: 250 AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAY 309
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT------ 175
++F + G P+ VTY LI GL K G++ A + +++ D+GH N + YT
Sbjct: 310 KIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNF 369
Query: 176 -----------------------------TIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
T M C F+ + + G I ++ G+ D
Sbjct: 370 FIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDV 429
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I K G+ +E ++ M G LD +YN +++ +CK GK+ AY +L+E
Sbjct: 430 RSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE 489
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+++ + T+ ++DGL K + A + E G + N+ Y+ ++D GK G+
Sbjct: 490 MKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGR 549
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
ID A + E M K + +T++S++ L KA+ + A L C +S
Sbjct: 550 IDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEA----LVCFQS 594
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 198/400 (49%), Gaps = 4/400 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D C+ + Y I + G +PD VTY SLI G + + + L ++ML+
Sbjct: 294 IMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDA 353
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G + Y SL+ F G+ ++ ++VF+++I P N ++ + K +
Sbjct: 354 GHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKG 413
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F ++ +GF+P++ +Y+ILI GL KAG+ R I + G A +A Y ++
Sbjct: 414 RMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDG 473
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K EIL MK K Y ++ KI RL EA E+ + G++L+
Sbjct: 474 FCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELN 533
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V Y++LI+ + K G+++ AYL+L+EM K+G + YT L+D L KA I A + +
Sbjct: 534 VVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQ 593
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M ++ N Y+ +++ L + K + A ++ M+ V + TY++M+ L K
Sbjct: 594 SMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVG 653
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ A L +G ++ A+++G+ ++ EA
Sbjct: 654 NITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEA 693
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 192/443 (43%), Gaps = 40/443 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI A + + +L +M+E G V + +L+ R ++ +L L+DE+
Sbjct: 50 VLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGS 109
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+ YN + C + G D A + F ++ L P ++ M+ LCK A
Sbjct: 110 CLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEA 169
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F ++ VP YN +I G AGR A +L+ L + G P+ +++ +I+ C
Sbjct: 170 EELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTC 229
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ RK L + MK+ + Y +I GR++EA +++M + +
Sbjct: 230 LGKKRKVDEALSLFEVMKKDAEP-NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPN 288
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++ N +++ CK KLE AY + + ++G D T+ LIDGL K G + A E
Sbjct: 289 LLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFE 348
Query: 301 YMNKIGFDSNLEAY-----------------------------------NCIVDRLGKDG 325
M G ++N Y N +D + K G
Sbjct: 349 KMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAG 408
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+++ +FE + + D +YS ++H L KA + S + + + G + A
Sbjct: 409 EVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYN 468
Query: 382 AVVDGLRHSGCRREAKKIQSKIR 404
AVVDG SG +A +I +++
Sbjct: 469 AVVDGFCKSGKVHKAYEILEEMK 491
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 173/387 (44%), Gaps = 5/387 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
MR P Y LI +L+LL +M E+G V + +L+ L + G+
Sbjct: 36 MRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQ 95
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
+A + ++ L P +N+ ++ K D A + F L+ G P+ V+Y
Sbjct: 96 VADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTS 155
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
+I LCKAGRL A + ++ P A Y T++ +++ ++L ++ +G
Sbjct: 156 MIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERG 215
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ +++ K ++ EA E M D + + +YN +I++ C G++E AY
Sbjct: 216 CIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAY 274
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+LDEME + T I++D LCKA ++ A E ++ G + + Y ++D L
Sbjct: 275 RILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGL 334
Query: 322 GKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
GK G++D A +FE M + Y+S++ N R K+ ++ G +
Sbjct: 335 GKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDL 394
Query: 378 SAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ +D + +G + + I IR
Sbjct: 395 TLLNTYMDCVFKAGEVEKGRMIFEDIR 421
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 125/259 (48%), Gaps = 3/259 (1%)
Query: 110 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 169
L + R D+A+ +++ F P Y +LI L +A R A +L+++ + G+
Sbjct: 19 ALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEV 78
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
+TT+++ R + L ++ +K D Y I F K G + A +
Sbjct: 79 GVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFF 138
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
++ G++ D VSY ++I + CK G+L A L +ME + Y + +I G A
Sbjct: 139 HELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSA 198
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYS 346
G + A LE + + G ++ ++N I+ LGK K+D A+++FE M+ +S TY+
Sbjct: 199 GRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYN 258
Query: 347 SMVHNLCKAKRLPSASKLL 365
++ LC R+ A ++L
Sbjct: 259 IIIDMLCLGGRVEEAYRIL 277
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 185/368 (50%), Gaps = 9/368 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ Y + S + + R+ E G P V YN L+ + L M + G
Sbjct: 115 IINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDG 174
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V++YN L+ L + + D A+++F +M P T+ M++ LCK D+A
Sbjct: 175 LIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA- 233
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R G F P + YN LI G+CK GR+ A +L E+ D+G PN ++Y+ I+
Sbjct: 234 RELAG----RFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSL 289
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +L + + M +G + + +I G+L EA D + M+ DG + ++
Sbjct: 290 CVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNV 349
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTLI+ C G LE A + D+M++ G + T++ILIDG K+G++ GA
Sbjct: 350 VAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNR 409
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G N+ Y C+VD L K+ D A ++ E M ++ ++ T+++ + LC R
Sbjct: 410 MISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGR 469
Query: 358 LPSASKLL 365
+ A KLL
Sbjct: 470 VEWAMKLL 477
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 148/311 (47%), Gaps = 5/311 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M + G P+VV YN+LI G N L +L + D+M G P+V +Y+ L+ + G
Sbjct: 340 MIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGD 399
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
A+ + MI P T+ M++ LCKN D A + + G P +T+N
Sbjct: 400 LVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNT 459
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
IKGLC GR+ A +L+ + G PN TY ++ FR KY+ + ++ +
Sbjct: 460 FIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARN 519
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ Y TV+ F + G + EA + + G D ++YNT+I+ YCK+GK++ A
Sbjct: 520 LQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAA 579
Query: 262 LLLDEMEK-QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN----C 316
L++ + + + D T+T LI G C NI+ A L+ G N +N C
Sbjct: 580 QLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRC 639
Query: 317 IVDRLGKDGKI 327
D LG G I
Sbjct: 640 FFDSLGHMGPI 650
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 195/441 (44%), Gaps = 48/441 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+DA F + M++ G+ P+V TYN L+ +N + + L EM G
Sbjct: 150 LLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKG 209
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PPD +Y +++ L + GK D+A + G P +N +++G+CK + A+
Sbjct: 210 CPPDAVTYTTMVSSLCKAGKIDDARE-----LAGRFKPSVPVYNALIDGMCKEGRIEVAI 264
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAG------------------------------- 150
++ + +G P +V+Y+ +I LC +G
Sbjct: 265 KLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGC 324
Query: 151 ----RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
+L A + K + G PN + Y T++ N + L++ M+R G +
Sbjct: 325 FMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNV 384
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I F K G L A++ +M++ G + ++V+Y ++++ CK + A L+++
Sbjct: 385 TTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEK 444
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M +G + T I GLC G ++ A LE M G N+ YN ++D L + K
Sbjct: 445 MTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNK 504
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+ A +F+ +E + + TY+++++ +A + A +L L G +
Sbjct: 505 YEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGT----APDSI 560
Query: 383 VVDGLRHSGCRREAKKIQSKI 403
+ + H+ C++ KI +++
Sbjct: 561 TYNTMIHAYCKQGKVKIAAQL 581
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 180/400 (45%), Gaps = 11/400 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ + +L M + G+ P+VV+Y+ +I + + + L +M G
Sbjct: 250 LIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG 309
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
++ ++ L+ F GK EA +++ MI P +N +++GLC N + AL
Sbjct: 310 CDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEAL 369
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ +Q+ G +P + TY+ILI G K+G L A + G PN +TYT ++
Sbjct: 370 QVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVL 429
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N + ++ M +G T + + T I GR++ A +E+M G +I
Sbjct: 430 CKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNI 489
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN L++ + K E A+ L E+E + + + T+ ++ G +AG + G L L
Sbjct: 490 TTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAG-MMGEALQLFG 548
Query: 302 MNKI-GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV-----KDSFTYSSMVHNLCKA 355
+ G + YN ++ K GK+ A + E + D TY+S++ C
Sbjct: 549 KALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNW 608
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVV----DGLRHSG 391
+ A L + G+ + A+V D L H G
Sbjct: 609 MNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMG 648
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 143/314 (45%), Gaps = 11/314 (3%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
D + Q M + C F ++NG + + AL+MF + + G P + YN L
Sbjct: 91 DMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHL 150
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
+ L + + + + G PN TY ++K +N + ++ M KG
Sbjct: 151 LDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGC 210
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
D Y T++++ K G++ +A + + + + YN LI+ CKEG++E A
Sbjct: 211 PPDAVTYTTMVSSLCKAGKIDDARE-----LAGRFKPSVPVYNALIDGMCKEGRIEVAIK 265
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
LL EM G + + +++ +I+ LC +GN++ A M G D+N+ + ++
Sbjct: 266 LLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCF 325
Query: 323 KDGKIDHAINVFESMEVKDS-----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
GK+ A+++++ M ++D Y++++H LC L A ++ +SG
Sbjct: 326 MRGKLYEALDLWKLM-IQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNV 384
Query: 378 SAQKAVVDGLRHSG 391
+ ++DG SG
Sbjct: 385 TTYSILIDGFAKSG 398
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 136/308 (44%), Gaps = 40/308 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C S + + ++M+ +G P+V TY+ LI G ++ L + + + M+ G
Sbjct: 355 LIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +Y ++ L + D+AN + + M TP T TFN + GLC N + A+
Sbjct: 415 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAM 474
Query: 122 RMFRGLQKHG-----------------------------------FVPELVTYNILIKGL 146
++ +Q HG P LVTYN ++ G
Sbjct: 475 KLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGF 534
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG---LEILSAMKRKGYT 203
+AG + A + + G AP++ITY T++ + K K+ +E +S+MK +
Sbjct: 535 SRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKE--WH 592
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y ++I ++EA ++++ + G+ + ++N L+ + +
Sbjct: 593 PDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHI 652
Query: 264 LDEMEKQG 271
LD++ ++G
Sbjct: 653 LDDILRKG 660
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 168/330 (50%), Gaps = 3/330 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ F ++ M+ G SP V+TYN++I G + + + LL EM+
Sbjct: 234 VVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAK 293
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P+ ++N L+ + A +VF++M L P T+N ++NGLC N D A
Sbjct: 294 RIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEA 353
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + G P +VTYN LI G CK L+ AR +L ++G G APN IT+ T++
Sbjct: 354 LGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDA 413
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + S M G + Y +I F + G +KEA ++M +G++ D
Sbjct: 414 YGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKAD 473
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEM---EKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+V+YN L++ CK+G+ A LLDEM EK+G + T+ +LI G C G ++ A
Sbjct: 474 LVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANR 533
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
L M + G N Y+ + D + + G I
Sbjct: 534 LLNEMLEKGLIPNRTTYDILRDEMMEKGFI 563
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 168/324 (51%), Gaps = 3/324 (0%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ M I +VVT++ +I G + + D++++M G P V +YN+++
Sbjct: 215 SVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGY 274
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ GK +A+ + ++M+ + P TFNI+++G C++ A ++F +Q+ G P +
Sbjct: 275 CKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNV 334
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
VTYN LI GLC G+L A + ++ G PN +TY ++ + + K E+L
Sbjct: 335 VTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDD 394
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
+ ++G + + T+I A+ K GR+ +A M+ GV ++ +YN LI +C+EG
Sbjct: 395 IGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGN 454
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARL--HLEYMNKIGFDSNLEA 313
++ A L EME G + D T+ IL+D LCK G K RL + M K G +N+
Sbjct: 455 VKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVT 514
Query: 314 YNCIVDRLGKDGKIDHAINVFESM 337
YN ++ GK++ A + M
Sbjct: 515 YNVLIKGFCNKGKLEEANRLLNEM 538
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 181/380 (47%), Gaps = 7/380 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
ML+ AY + D +R + G ++ N ++ + + + EM+
Sbjct: 164 MLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRR 223
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I +V +++ +++ L ++GK +A V +DM +P T+N +++G CK A
Sbjct: 224 RIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKA 283
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + P +T+NILI G C+ + A+ + +E+ G PN +TY +++
Sbjct: 284 DALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLING 343
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
N K L + M G + Y +I F K LKEA + ++ + G+ +
Sbjct: 344 LCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPN 403
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++++NTLI+ Y K G+++ A+LL M G + T+ LI G C+ GN+K AR +
Sbjct: 404 VITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAK 463
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-------FTYSSMVHNLC 353
M G ++L YN +VD L K G+ A+ + + M + + TY+ ++ C
Sbjct: 464 EMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFC 523
Query: 354 KAKRLPSASKLLLSCLKSGV 373
+L A++LL L+ G+
Sbjct: 524 NKGKLEEANRLLNEMLEKGL 543
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 151/302 (50%), Gaps = 5/302 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID YC+ +L M I P+ +T+N LI G R+ ++ + + +EM G
Sbjct: 270 IIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQG 329
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG-DLTPCTATFNIMLNGLCKNRYTDNA 120
+ P+V +YNSL++ L GK DEA QD + G L P T+N ++NG CK + A
Sbjct: 330 LQPNVVTYNSLINGLCSNGKLDEA-LGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEA 388
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
M + K G P ++T+N LI KAGR+ A + + D+G PN TY ++
Sbjct: 389 REMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVG 448
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT---DYMEQMVTDGV 237
R K ++ M+ G D Y ++ A K G ++A D M M G
Sbjct: 449 FCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGR 508
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+ +IV+YN LI +C +GKLE A LL+EM ++G ++ T+ IL D + + G I
Sbjct: 509 RANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDG 568
Query: 298 HL 299
HL
Sbjct: 569 HL 570
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 179/379 (47%), Gaps = 7/379 (1%)
Query: 32 VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 91
+ + L+ +N + +L+ D + G S N ++ L + G+ V+++
Sbjct: 160 IIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKE 219
Query: 92 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
MI + TF++++NGLCK A + ++ GF P ++TYN +I G CKAG+
Sbjct: 220 MIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGK 279
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
+ A +LKE+ PN IT+ ++ R+ ++ M+R+G + Y +
Sbjct: 280 MFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNS 339
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+I G+L EA ++M G++ ++V+YN LIN +CK+ L+ A +LD++ K+G
Sbjct: 340 LINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRG 399
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
+ T LID KAG + A L M G N+ YNC++ ++G + A
Sbjct: 400 LAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEAR 459
Query: 332 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL---KSGVRILKSAQKAVV 384
+ + ME D TY+ +V LCK A +LL K G R ++
Sbjct: 460 KLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLI 519
Query: 385 DGLRHSGCRREAKKIQSKI 403
G + G EA ++ +++
Sbjct: 520 KGFCNKGKLEEANRLLNEM 538
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 115/249 (46%), Gaps = 5/249 (2%)
Query: 159 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 218
L LG G A N+I ++ +N + L LE G+ ++ + VK
Sbjct: 148 LSVLGSWGCA-NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVK 206
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
GR+ ++M+ + +++V+++ +IN CK GK + A ++++M+ GF T
Sbjct: 207 EGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVIT 266
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+ +IDG CKAG + A L+ M N +N ++D +D + A VFE M+
Sbjct: 267 YNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQ 326
Query: 339 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
+ + TY+S+++ LC +L A L G++ A+++G +
Sbjct: 327 RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLK 386
Query: 395 EAKKIQSKI 403
EA+++ I
Sbjct: 387 EAREMLDDI 395
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 175/359 (48%), Gaps = 8/359 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I + C+ L+ M +G PD T+NSLI G R + + + DL D+M G
Sbjct: 159 VIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRG 218
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
DV SY +L+ L + G+ DEA +F +M D+ + ++ GLC + L
Sbjct: 219 FAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDM----HMYAALVKGLCNAERGEEGL 274
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M R +++ G+ P Y ++ C+ + + A +L+E+ + G AP +T T ++
Sbjct: 275 LMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAY 334
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + L +L MK +G + + Y ++ F G++ +A + +M GV D
Sbjct: 335 CKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDA 394
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN LI C +G +E+A+ LL ME G D+YT+ LI+ LCK G A +
Sbjct: 395 VTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDS 454
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ G N +N +++ L K GK D A E M D++TYSS + +LCK K
Sbjct: 455 LETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMK 513
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 177/354 (50%), Gaps = 8/354 (2%)
Query: 23 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 82
R A +P TYN++I R + L+ +L L M+ G PD +++NSL+ + +
Sbjct: 145 RHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQV 204
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
D A +F M ++ ++ GLC+ D A+ +F + + P++ Y L
Sbjct: 205 DVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAAL 260
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
+KGLC A R +L+ + + G P+ Y ++ R RK K E+L M KG
Sbjct: 261 VKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGL 320
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
VI A+ K GR+ +A +E M G + ++ +YN L+ +C EGK+ A
Sbjct: 321 APCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMT 380
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
LL++M G D T+ +LI G C G+I+ A L M G ++ YN +++ L
Sbjct: 381 LLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALC 440
Query: 323 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
KDG+ D A ++F+S+E + ++ T++S+++ LCK+ + A K L + +G
Sbjct: 441 KDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAG 494
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 199/420 (47%), Gaps = 23/420 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ +C T+LN+MR G++PD VTYN LI G + + + LL M G
Sbjct: 365 LVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDG 424
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D ++YN+L++ L + G+ D+A +F + + P TFN ++NGLCK+ D A
Sbjct: 425 LIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAW 484
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P+ TY+ I+ LCK + + E+ P+ + YT ++
Sbjct: 485 KFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKL 544
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R Y L M G D Y T + A+ GRL EA + + +M +GV +D
Sbjct: 545 LKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDT 604
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK------------A 289
++YNTL++ + G+ + A +L +M +++T+ IL+ L + A
Sbjct: 605 MAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPA 664
Query: 290 GNIKGARLH-----LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT 344
G K L + M K F N Y+ I++ +DG+ + A ++ M+ +DS +
Sbjct: 665 GVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMK-EDSIS 723
Query: 345 -----YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
Y+++V CK+KR A L+ S ++ G + + ++ GL G +AK+I
Sbjct: 724 LNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEI 783
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 169/359 (47%), Gaps = 4/359 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D C+ +L M E G++P VVT ++I + +S +L +L+ M G
Sbjct: 295 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 354
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+VW+YN+L+ GK +A + M + P T+N+++ G C + + ++A
Sbjct: 355 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 414
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ R ++ G + + TYN LI LCK GR A + L G PNA+T+ +++
Sbjct: 415 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 474
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ K + + L M G T D + Y + I K+ +E ++ +M+ V+
Sbjct: 475 CKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPST 534
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y +I+ KE EM G D T+T + C G + A L
Sbjct: 535 VNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLME 594
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
M+K G + AYN ++D G+ DHA+++ + M V + FTY ++ +L + +
Sbjct: 595 MSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMR 653
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 171/392 (43%), Gaps = 45/392 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C + G +L RM+E G P Y +++ R + ++L EM E G
Sbjct: 260 LVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKG 319
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P V + ++++ + G+ +A RV + M P T+N ++ G C A+
Sbjct: 320 LAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAM 379
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++ G P+ VTYN+LI+G C G + +A
Sbjct: 380 TLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESA-------------------------- 413
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
FR +L M+ G D + Y +I A K GR +A + + T G++ +
Sbjct: 414 FR---------LLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNA 464
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++N+LIN CK GK + A+ L++M G D YT++ I+ LCK +KG++ L +
Sbjct: 465 VTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK---MKGSQEGLSF 521
Query: 302 MNKI---GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCK 354
+ ++ + Y ++ +L K+ + M D TY++ + C
Sbjct: 522 IGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCI 581
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
RL A +L+ K+GV + A ++DG
Sbjct: 582 EGRLNEAENVLMEMSKNGVTVDTMAYNTLMDG 613
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 154/392 (39%), Gaps = 90/392 (22%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+A C+ D ++ + + GI P+ VT+NSLI G ++ + L++M+ G
Sbjct: 435 LINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAG 494
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD ++Y+S + L ++ E +M+ D+ P T + I+++ L K R
Sbjct: 495 CTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVA 554
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL------------------- 162
R + + G P++VTY ++ C GRL A +L E+
Sbjct: 555 RTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGH 614
Query: 163 ---GDSGHA-------------PNAITYTTIMKCCFRNRKYKLGLEILSA---------- 196
G + HA PN TY +++ R R + L + A
Sbjct: 615 ASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTD 674
Query: 197 -------MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
MK+ + + Y +++ F + GR +EAT + M D + L+ Y L+
Sbjct: 675 VFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVT 734
Query: 250 LYCKEGKLEAAYLLLDEMEKQGF-----------------------------------EC 274
+CK + A++L+ M + GF
Sbjct: 735 CFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSP 794
Query: 275 DKYTHTILIDGLCKAGNIKGAR---LHLEYMN 303
D+ ++IDGL K G+ +R + LE MN
Sbjct: 795 DEIVWKVIIDGLIKKGHSDISREMIIMLERMN 826
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 112/241 (46%), Gaps = 8/241 (3%)
Query: 168 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
AP A TY +++ R L LS M R G+ D + + ++I + + ++ A D
Sbjct: 150 APTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARD 209
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
++M G D+VSY TLI C+ G+++ A L EM++ D + + L+ GLC
Sbjct: 210 LFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQP----DMHMYAALVKGLC 265
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SF 343
A + L L M ++G+ + AY +VD ++ K A + + M K
Sbjct: 266 NAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVV 325
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
T +++++ CK R+ A ++L G + A+V G + G +A + +K+
Sbjct: 326 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM 385
Query: 404 R 404
R
Sbjct: 386 R 386
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 205/477 (42%), Gaps = 78/477 (16%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+++ C+ + + + M +G P+ V Y SLI G ++ + + L DEM+E
Sbjct: 300 ILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEA 359
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV ++ ++ L + G ++A + F++M+ G P T+ ++ GL K NA
Sbjct: 360 GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANA 419
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK- 179
R+ +G+ HG P+ VTY L+ G CK GRL A +L EL +PN Y++++
Sbjct: 420 FRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNG 479
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
C K ++ K T D C++I K GRL EA ++MV++G +
Sbjct: 480 LCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKP 539
Query: 240 DIVSYNTLINLYCK--EGKLEAAYLLLDEMEK---------------------------- 269
D +YN LIN C+ E ++E A+ LL ++EK
Sbjct: 540 DATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVK 599
Query: 270 -------QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
+G+ D +T L GLC G + A + M + G + AY CI++ L
Sbjct: 600 MLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLI 659
Query: 323 K-----------------------------------DGKIDHAINVFESMEVKDSFT--- 344
K G +D A + FESM +
Sbjct: 660 KVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSV 719
Query: 345 --YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
Y +++H CKA ++ +A KL + G ++ DGL SG +A+++
Sbjct: 720 MIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQEL 776
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 172/347 (49%), Gaps = 5/347 (1%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
+AG DV TYN L+ S + +EML+ GI P+ +S+N L+ + + D
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV-PELVTYNIL 142
+A F+ M P TF I+++ LCK + A +F + GFV P+ + +
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
++ L KA R++ AR + ++ G P+AI Y T++ + + L++L M K
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
Y ++ + K G L+ A + M G + + V Y +LI+ + K G+++ A
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
L DEM + G+ D THT++IDGLCK+GN + A E M + G N+ Y I+ L
Sbjct: 352 LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLS 411
Query: 323 KDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 365
K G++ +A + + M DS TY ++ CK RL A++LL
Sbjct: 412 KIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLL 458
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 192/380 (50%), Gaps = 8/380 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
+L+D C+ + + + + M G + PD + +++ + + + ++ +M +
Sbjct: 194 ILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEK 253
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G PPD +YN+++ L + G EA +V +M+ P T+ I++N LCK +
Sbjct: 254 CGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLER 313
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +FR + GF P V Y LI G K+GR++ A + E+ ++G+ P+ IT+T ++
Sbjct: 314 AEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMID 373
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
++ ++ + M R G + Y T+I KIGR+ A M+ M+ G
Sbjct: 374 GLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFP 433
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D V+Y L++ +CK G+L+ A LLDE++K + ++ L++GLC G+++ L
Sbjct: 434 DSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDL 493
Query: 300 EYMNKIGFDSNLEAYNC-IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
+K ++ C I+ L K G++D A +F+ M + D+ TY+ +++ LC+
Sbjct: 494 FEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCR 553
Query: 355 AK--RLPSASKLLLSCLKSG 372
++ R+ A LL K G
Sbjct: 554 SRENRVERAFALLHDLEKVG 573
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 190/406 (46%), Gaps = 10/406 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI ++ + D T M+ PD+ T+ L+ + + + ++ EM+ M
Sbjct: 159 ILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAM 218
Query: 61 G-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G +PPD + +++ L + + EA VF M P +N M++GL K +
Sbjct: 219 GFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQE 278
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
AL++ + VP VTY IL+ LCKAG L A + + + SG PN++ YT+++
Sbjct: 279 ALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIH 338
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
++ + K + M GY D + +I K G ++A E+M+ G +
Sbjct: 339 GFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKP 398
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
++V+Y T+I K G++ A+ ++ M G D T+ L+DG CK G + A L
Sbjct: 399 NVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLL 458
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI-NVFE----SMEVKDSFTYSSMVHNLCK 354
+ ++K NL+ Y+ +V+ L G ++ + ++FE + E D S++ LCK
Sbjct: 459 DELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCK 518
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 400
RL A ++ + G + + +++GL CR +++
Sbjct: 519 TGRLDEACRIFQRMVSEGCKPDATTYNILINGL----CRSRENRVE 560
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 162/361 (44%), Gaps = 39/361 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D +C+ D +L+ + + SP++ Y+SL+ G + +LD L E +
Sbjct: 441 LLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAA 500
Query: 62 IPP-DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR--YTD 118
D S++ L + G+ DEA R+FQ M+ P T+NI++NGLC++R +
Sbjct: 501 AETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVE 560
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A + L+K G++P+ VTY L GLCK G + A +L+E G + + YT +
Sbjct: 561 RAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALC 620
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ + + M R+G D YC +I +K+ +L++A + ++M+ G +
Sbjct: 621 TGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQK 680
Query: 239 LDIVSY------------------------------------NTLINLYCKEGKLEAAYL 262
+ +Y + LI+ +CK K++AA
Sbjct: 681 PTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALK 740
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
L ++M +G T L DGL ++G + A+ L+ M G + + I+D L
Sbjct: 741 LFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLR 800
Query: 323 K 323
K
Sbjct: 801 K 801
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 121/291 (41%), Gaps = 3/291 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG--ATRNSLLSCSLDLLDEMLE 59
+I C+ D I RM G PD TYN LI G +R + + + LL ++ +
Sbjct: 512 IIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEK 571
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+G PD +Y L L ++G+ D A ++ ++ + + GLC D
Sbjct: 572 VGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDR 631
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+ +F+ + + G P+ Y +I GL K +L A E+ G P TYT +++
Sbjct: 632 AVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQ 691
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFG-YCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+M +G Y +I F K ++ A E M++ G
Sbjct: 692 ALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNV 751
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
V+ +L + + GK E A LL EM G T T ++DGL K+
Sbjct: 752 PTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKS 802
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 129/290 (44%), Gaps = 6/290 (2%)
Query: 115 RYTDNALRMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+ T A+ FR ++ GF ++ TYN L+ L I +E+ +G APN +
Sbjct: 97 KVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFS 156
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
+ +++ R R+ + MKRK D + ++ K G ++A + +M+
Sbjct: 157 FNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMM 216
Query: 234 TDG-VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
G V D + ++ K +++ A + +MEK GF D + +IDGL KAG+
Sbjct: 217 AMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHA 276
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 348
+ A L+ M Y +V+ L K G ++ A +F M +S Y+S+
Sbjct: 277 QEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSL 336
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
+H K+ R+ A L +++G R ++DGL SG +A K
Sbjct: 337 IHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAK 386
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 106/260 (40%), Gaps = 45/260 (17%)
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
A ++ G+ D F Y ++ V + E+M+ G+ + S+N LI + +
Sbjct: 109 AGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTR 168
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG------------------------- 290
+ + A + M+++ + D +T IL+D LCKAG
Sbjct: 169 RADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALH 228
Query: 291 -----------NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
+K AR M K GF + AYN ++D L K G A+ V ++M
Sbjct: 229 TAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLA 288
Query: 340 K----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
K TY +V++LCKA L A +L SG R +++ G SG +E
Sbjct: 289 KACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKE 348
Query: 396 A-----KKIQSKIRMAKISH 410
A + +++ R I+H
Sbjct: 349 ACSLFDEMVEAGYRPDVITH 368
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L+ A C + D + M G + V+ Y++LI G + + +L L ++M+
Sbjct: 689 LVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISR 748
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P + SL L + GK ++A + Q+M G P ATF +L+GL R +D +
Sbjct: 749 GNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL---RKSDES 805
Query: 121 LRMFRGLQK 129
++ + +Q+
Sbjct: 806 GKLLKLVQE 814
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 214/478 (44%), Gaps = 75/478 (15%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ Y + D G + R+ G+ PDV +YN+LI G ++ + + DL +M E
Sbjct: 123 ILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQ 182
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+V +Y+SL++ L + + D+A RV + M+ + P T+N +++G + +
Sbjct: 183 GIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKES 242
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT---- 176
+R+F+ + VP++ N + LCK GR++ AR I + G P+ I+Y
Sbjct: 243 VRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHG 302
Query: 177 ---------------IMKC-----------CFRNRKYKLG-----LEILSAMKRKGYTFD 205
+M C N +LG L + M ++G D
Sbjct: 303 YATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPD 362
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN-------------------- 245
+ TVI+AF ++GRL +A + M+ GV D Y+
Sbjct: 363 IITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELIS 422
Query: 246 ----------------TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
++IN CKEG++ ++D + G + T L+DG C
Sbjct: 423 DMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLV 482
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 345
GN+K A L+ M +G + ++ YN +VD K G+ID A+ +F M K S +Y
Sbjct: 483 GNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSY 542
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ ++H L +A+R A ++ ++SG+ + V+ GL + C EA + K+
Sbjct: 543 NIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKL 600
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 195/442 (44%), Gaps = 40/442 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL----------LSCSL 51
LI+ C+ D +L +M AG+ P+ +TYN LI G + + + +S SL
Sbjct: 194 LINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSL 253
Query: 52 -------------------------DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
D+ D M+ G PDV SY +L+H G +
Sbjct: 254 LVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMD 313
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+F M+C + P FN ++N + D +L MF + K G P+++T++ +I
Sbjct: 314 NLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAF 373
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C+ GRL A + D+G P+ Y+ +++ R E++S M KG
Sbjct: 374 CRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPC 433
Query: 207 FGYCT-VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ T +I K GR+ E D ++ ++ G + +++++N+L++ YC G ++ A LLD
Sbjct: 434 IKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLD 493
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
ME G E D YT+ L+DG CK G I A M +YN I+ L +
Sbjct: 494 SMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQAR 553
Query: 326 KIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+ A +F ES TY++++ LC+ A+ LL V+
Sbjct: 554 RTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFN 613
Query: 382 AVVDGLRHSGCRREAKKIQSKI 403
V+ + G R+EAK++ + I
Sbjct: 614 IVIRAMFKVGRRQEAKELFAAI 635
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 171/374 (45%), Gaps = 5/374 (1%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
+P + TYN LI R L + +L G+ PDV+SYN+L+ + G+ D+A+
Sbjct: 115 APTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHD 174
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
+F M + P T++ ++NGLCK + D A R+ R + G P +TYN LI G
Sbjct: 175 LFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYS 234
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
+G + + + KE+ S P+ + M ++ + K +I +M KG D
Sbjct: 235 TSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVI 294
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y ++ + G + + MV +GV D +NTLIN Y + G ++ + L+ ++M
Sbjct: 295 SYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDM 354
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
KQG D T + +I C+ G + A +M G + Y+C++ +
Sbjct: 355 TKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDL 414
Query: 328 DHAINVFESMEVKDSFT-----YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
A + M K ++S+++NLCK R+ ++ + +G R +
Sbjct: 415 VKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNS 474
Query: 383 VVDGLRHSGCRREA 396
+VDG G +EA
Sbjct: 475 LVDGYCLVGNMKEA 488
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 149/340 (43%), Gaps = 1/340 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I A+C+ D N M + G+ PD Y+ LI G L + +L+ +ML G
Sbjct: 369 VISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKG 428
Query: 62 IPPD-VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
IPP + + S+++ L + G+ E V +I P TFN +++G C A
Sbjct: 429 IPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEA 488
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + ++ G P++ TYN L+ G CK GR+ A + +++ +++Y I+
Sbjct: 489 VGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHG 548
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+ R+ + E+ M G Y TV+ + EA +E++ + V+ D
Sbjct: 549 LFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFD 608
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I+++N +I K G+ + A L + G T+ ++I L K + + A
Sbjct: 609 ILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFS 668
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
M K + N I+ L G++ A N ++ K
Sbjct: 669 SMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKK 708
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 126/265 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D YC + +L+ M G+ PD+ TYN+L+ G ++ + +L L +ML
Sbjct: 475 LVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKR 534
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ SYN ++H LFQ + A +F +MI + T+ +L GLC+N TD A
Sbjct: 535 VTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEAN 594
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L +++T+NI+I+ + K GR + A+ + + G P +TY ++
Sbjct: 595 MLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNL 654
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ + S+M++ T D +I + G + +A +Y+ ++ G+ +
Sbjct: 655 IKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEA 714
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDE 266
+ + LI L+ GK LL E
Sbjct: 715 TTTSLLIYLFSVNGKYREYIKLLPE 739
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 154/357 (43%), Gaps = 19/357 (5%)
Query: 53 LLDEML-EMGIPPDVWSYNSLMHCLFQLGK-------PDEANRVFQDM---ICGDLTPCT 101
L DE+L P N L+ L + P A +F+ M C + P
Sbjct: 59 LFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELFKRMDRCACPEAAPTI 118
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
T+NI++N + R D L +F L + G P++ +YN LI G K G + A + +
Sbjct: 119 YTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYK 178
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ + G PN +TY++++ + ++ +L M G + Y +I + G
Sbjct: 179 MEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGM 238
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
KE+ ++M + + D+ + N+ + CK G+++ A + D M +G + D ++
Sbjct: 239 WKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGA 298
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 340
L+ G AG I G M G + +N +++ + G +D ++ +FE M +
Sbjct: 299 LLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQG 358
Query: 341 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
D T+S+++ C+ RL A + + +GV AV L C R
Sbjct: 359 VNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGV----PPDTAVYSCLIQGQCNR 411
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 140/282 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ G +++ + G P+++T+NSL+ G + ++ LLD M +G
Sbjct: 440 IINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVG 499
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+++YN+L+ + G+ D+A +F+DM+ +T + ++NI+L+GL + R T A
Sbjct: 500 VEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAK 559
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
MF + + G + TY ++ GLC+ A +L++L + +T+ +++
Sbjct: 560 EMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAM 619
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ + + E+ +A+ G Y +I +K ++A + M D
Sbjct: 620 FKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDS 679
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
N +I + +G++ A L +++K+G + T ++LI
Sbjct: 680 RILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI 721
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Query: 277 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
YT+ ILI+ +A + + G ++ +YN ++D K+G++D A ++F
Sbjct: 119 YTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYK 178
Query: 337 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 392
ME + + TYSS+++ LCK K + A ++L + +GVR ++ G SG
Sbjct: 179 MEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGM 238
Query: 393 RREAKKI 399
+E+ ++
Sbjct: 239 WKESVRV 245
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 194/409 (47%), Gaps = 44/409 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I Y F+ Y +L R+RE G P VV++NS++ + + +L L E+++
Sbjct: 59 MIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKD 117
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +YN ++ L G+ +EA R+ +M L P T NIM++ LCK R + A
Sbjct: 118 AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAY 177
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT------ 175
++F + G P+ VTY LI GL K G++ A + +++ D+GH N + YT
Sbjct: 178 KIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNF 237
Query: 176 -----------------------------TIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
T M C F+ + + G I ++ G+ D
Sbjct: 238 FIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDV 297
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I K G+ +E ++ M G LD +YN +++ +CK GK+ AY +L+E
Sbjct: 298 RSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE 357
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+++ + T+ ++DGL K + A + E G + N+ Y+ ++D GK G+
Sbjct: 358 MKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGR 417
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
ID A + E M K + +T++S++ L KA+ + A L C +S
Sbjct: 418 IDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEA----LVCFQS 462
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 198/400 (49%), Gaps = 4/400 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D C+ + Y I + G +PD VTY SLI G + + + L ++ML+
Sbjct: 162 IMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDA 221
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G + Y SL+ F G+ ++ +++F+++I P N ++ + K +
Sbjct: 222 GHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKG 281
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F ++ +GF+P++ +Y+ILI GL KAG+ R I + G A +A Y ++
Sbjct: 282 RMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDG 341
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K EIL MK K Y ++ KI RL EA E+ + G++L+
Sbjct: 342 FCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELN 401
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V Y++LI+ + K G+++ AYL+L+EM K+G + YT L+D L KA I A + +
Sbjct: 402 VVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQ 461
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M ++ N Y+ +++ L + K + A ++ M+ V + TY++M+ L K
Sbjct: 462 SMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVG 521
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ A L +G ++ A+++G+ ++ EA
Sbjct: 522 NITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEA 561
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 194/395 (49%), Gaps = 4/395 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C + Y IL+ M A + P+++T N ++ + L + + + +
Sbjct: 127 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR 186
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD +Y SL+ L + G+ DEA R+F+ M+ + ++ + ++
Sbjct: 187 GCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDG 246
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F+ L + G P+L N + + KAG + R I +++ G P+ +Y+ ++
Sbjct: 247 HKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHG 306
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + I AMK++G+ D Y V+ F K G++ +A + +E+M VQ
Sbjct: 307 LTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPT 366
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +Y +++ K +L+ AY+L +E + +G E + ++ LIDG K G I A L LE
Sbjct: 367 VATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILE 426
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EVK---DSFTYSSMVHNLCKAK 356
M K G N+ +N ++D L K +I+ A+ F+SM E+K +++TYS +++ LC+ +
Sbjct: 427 EMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQ 486
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ A K G+ ++ GL G
Sbjct: 487 KYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVG 521
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 183/421 (43%), Gaps = 40/421 (9%)
Query: 15 GYTILNRMREAGISPDVVT-----------------------------------YNSLIA 39
+ + ++ G+ PD V+ YN++I
Sbjct: 2 AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61
Query: 40 GATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTP 99
G + LL+ + E G P V S+NS++ CL + K DEA +F+ M D P
Sbjct: 62 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEP 120
Query: 100 CTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL 159
++T+NI+++ LC + A R+ ++ P L+T NI++ LCKA +L A I
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180
Query: 160 KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 219
+ G P+ +TY +++ + + + M G+ + Y ++I F
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 240
Query: 220 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
GR ++ ++++ G + D+ NT ++ K G++E ++ +++ GF D ++
Sbjct: 241 GRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSY 300
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
+ILI GL KAG + M + GF + AYN +VD K GK+ A + E M+
Sbjct: 301 SILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKE 360
Query: 340 K----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
K TY ++V L K RL A L G+ + +++DG G E
Sbjct: 361 KCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDE 420
Query: 396 A 396
A
Sbjct: 421 A 421
>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
Length = 637
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 178/364 (48%), Gaps = 6/364 (1%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
+ + + M G+ P VVTYN+LI ++ + ++ D+M+ I P+V +Y S++
Sbjct: 162 AWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMIC 221
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
L + G +A R+F M + P T+N++++G C+ ++A +++ L G +P
Sbjct: 222 VLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIP 281
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
V + LI G CKA R A+ + +++ G AP Y ++M FR+ + L +
Sbjct: 282 NAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLY 341
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
M R G D F V+ G+++ A ++E + DGV L+ +YN LI+ YC+
Sbjct: 342 QEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRN 401
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
G LE A M + G E + +++ LIDG K G ++ A M G + N+ Y
Sbjct: 402 GNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTY 461
Query: 315 NCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
++ K+G ID A + M ++ T S +V LC+ R+ A + ++
Sbjct: 462 TALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVME--H 519
Query: 371 SGVR 374
SG++
Sbjct: 520 SGIK 523
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 175/398 (43%), Gaps = 56/398 (14%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +CQ ++ + + + +G+ P+ V + +LI G + S + D+ +M
Sbjct: 253 VLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRF 312
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P V YNSLM F+ G EA ++Q+M L P T +I++ GLC A
Sbjct: 313 GVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVA 372
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R G+++ G YN LI C+ G L A + + G PN ++Y++++
Sbjct: 373 ARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLI-- 430
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
DG K+G+++ A +MV G++ +
Sbjct: 431 ------------------------DGHS---------KLGKMQIAMAIYTEMVAKGIEPN 457
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
+V+Y LI+ + K G ++AA+ EM + G + T ++L+DGLC+ ++ A R +
Sbjct: 458 VVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVM 517
Query: 300 E-----YMNKIGFDSNLEA-----------YNCIVDRLGKDGKIDHAINVFESME----V 339
E Y + F SN Y ++ L DG+ A +F M +
Sbjct: 518 EHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMI 577
Query: 340 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
DSFTY+ ++ C + +A L +K GV+ ++
Sbjct: 578 SDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPMR 615
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 151/287 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C +LN M ++P+V T+N LI G + + + +L M++ G
Sbjct: 235 LIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQG 294
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V +Y SLM F + + ++A VF + +TP ++++M+NGLCKN+ D A+
Sbjct: 295 VEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAV 354
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F+ + P VTY+ LI GLCK+GR+ ++ E+ + G N ITY +++
Sbjct: 355 KLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGL 414
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N + + +L+ MK +G D Y T++ K GRLK+A + ++ G L+I
Sbjct: 415 CKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNI 474
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
Y +IN CKEG + A LL +ME G D T+ LI L K
Sbjct: 475 RMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFK 521
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 182/344 (52%), Gaps = 6/344 (1%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
+ PDV+ Y ++I ++ L+ + DL EM+ I P+V ++NSL++ +G+ EA
Sbjct: 190 VRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAV 249
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ +M ++ P TFNI+++GLCK A + + K G P +VTY L+ G
Sbjct: 250 GLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGY 309
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
+ A+ + + G PN +Y+ ++ +N+ +++ M K T +
Sbjct: 310 FLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNT 369
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y ++I K GR+ + D ++++ G +I++YN+L+N CK +++ A LL +
Sbjct: 370 VTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTK 429
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M+ +G + D T+T L+DGLCK G +K A R++ + + K G+ N+ Y +++ L K+G
Sbjct: 430 MKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCK-GYPLNIRMYTVMINGLCKEG 488
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
D A+++ ME + D+ TY +++ L K + A KLL
Sbjct: 489 FFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLL 532
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 193/433 (44%), Gaps = 40/433 (9%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + +M GI P++ T+N LI + L+ + ++ ++L++G PD + N+
Sbjct: 69 FKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNT 128
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
L+ L GK EA +I ++ ++NGLCK+ T AL++ R ++
Sbjct: 129 LLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLL 188
Query: 132 FV------------------------------------PELVTYNILIKGLCKAGRLRTA 155
V P +VT+N LI G C G+L+ A
Sbjct: 189 LVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEA 248
Query: 156 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 215
+L E+ + PN T+ ++ + + K +LS M ++G + Y +++
Sbjct: 249 VGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDG 308
Query: 216 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
+ + + +A + GV ++ SY+ +IN CK ++ A L EM + +
Sbjct: 309 YFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPN 368
Query: 276 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
T++ LIDGLCK+G I ++ +N G +N+ YN +++ L K+ ++D AI +
Sbjct: 369 TVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLT 428
Query: 336 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
M+ D TY+++V LCK RL A ++ L G + +++GL G
Sbjct: 429 KMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEG 488
Query: 392 CRREAKKIQSKIR 404
EA + S++
Sbjct: 489 FFDEALSLLSQME 501
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 154/350 (44%), Gaps = 41/350 (11%)
Query: 83 DEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
D+A F ++ + TP FN +L+ L K + A+ + ++ G PE+ T+NI
Sbjct: 34 DDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNI 93
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
LI +L A ++ ++ G+ P+ +T T+++ N K K L + RK
Sbjct: 94 LINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKR 153
Query: 202 YTFDGFGYCTVIAAFVKIGRLK------------------------------------EA 225
+ D Y T+I K G + +A
Sbjct: 154 FHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDA 213
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
D +M+ + ++V++N+LI +C G+L+ A LL+EM + YT ILIDG
Sbjct: 214 YDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDG 273
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 341
LCK G +K A L M K G + N+ Y ++D +++ A +VF ++ ++ +
Sbjct: 274 LCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPN 333
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+YS M++ LCK K + A KL + +++DGL SG
Sbjct: 334 VHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSG 383
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 108/197 (54%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ D + M ++P+ VTY+SLI G ++ +S DL+DE+
Sbjct: 339 VMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNR 398
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P ++ +YNSL++ L + + D+A + M + P +T+ +++GLCKN +A
Sbjct: 399 GQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDA 458
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+++ L G+ + Y ++I GLCK G A +L ++ D+G P+A+TY T++
Sbjct: 459 QRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISA 518
Query: 181 CFRNRKYKLGLEILSAM 197
F+N K +++L M
Sbjct: 519 LFKNNKNGKAVKLLREM 535
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 112/245 (45%), Gaps = 11/245 (4%)
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
+ H P + I+ + +K+ + M+ KG + F + +I F + +L
Sbjct: 47 NNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNF 106
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A + +++ G Q D V+ NTL+ C GK++ A D + ++ F D+ ++ LI+
Sbjct: 107 AFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLIN 166
Query: 285 GLCKAGNIKGARLHLEYMNKIG----FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
GLCK+G + A L+ + KI ++ Y I+D KD + A +++ M VK
Sbjct: 167 GLCKSGETRAA---LQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVK 223
Query: 341 DSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ T++S+++ C +L A LL + V ++DGL G ++A
Sbjct: 224 KIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKA 283
Query: 397 KKIQS 401
+ S
Sbjct: 284 TSVLS 288
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 194/409 (47%), Gaps = 44/409 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I Y F+ Y +L R+RE G P VV++NS++ + + +L L E+++
Sbjct: 325 MIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKD 383
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +YN ++ L G+ +EA R+ +M L P T NIM++ LCK R + A
Sbjct: 384 AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAY 443
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT------ 175
++F + G P+ VTY LI GL K G++ A + +++ D+GH N + YT
Sbjct: 444 KIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNF 503
Query: 176 -----------------------------TIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
T M C F+ + + G I ++ G+ D
Sbjct: 504 FIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDV 563
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I K G+ +E ++ M G LD +YN +++ +CK GK+ AY +L+E
Sbjct: 564 RSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE 623
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+++ + T+ ++DGL K + A + E G + N+ Y+ ++D GK G+
Sbjct: 624 MKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGR 683
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
ID A + E M K + +T++S++ L KA+ + A L C +S
Sbjct: 684 IDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEA----LVCFQS 728
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 212/450 (47%), Gaps = 40/450 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D C+ + Y I + G +PD VTY SLI G + + + L ++ML+
Sbjct: 428 IMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDA 487
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G + Y SL+ F G+ ++ +++F+++I P N ++ + K +
Sbjct: 488 GHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKG 547
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F ++ +GF+P++ +Y+ILI GL KAG+ R I + G A +A Y ++
Sbjct: 548 RMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDG 607
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K EIL MK K Y ++ KI RL EA E+ + G++L+
Sbjct: 608 FCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELN 667
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF---------------------------- 272
+V Y++LI+ + K G+++ AYL+L+EM K+G
Sbjct: 668 VVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQ 727
Query: 273 -----EC--DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+C + YT++ILI+GLC+ A + + M K G N+ Y ++ L K G
Sbjct: 728 SMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVG 787
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
I A ++FE + + D+ ++++++ + A R A ++ G RI +
Sbjct: 788 NITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCI 847
Query: 382 AVVDGLRHSGCRREAKKIQSKIR-MAKISH 410
+++D L S C +A + + +R +AK H
Sbjct: 848 SLLDALNKSECLEQAAIVGAVLREIAKSQH 877
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 192/443 (43%), Gaps = 40/443 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI A + + +L +M+E G V + +L+ R ++ +L L+DE+
Sbjct: 184 VLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGS 243
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+ YN + C + G D A + F ++ L P ++ M+ LCK A
Sbjct: 244 CLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEA 303
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F ++ VP YN +I G AGR A +L+ L + G P+ +++ +I+ C
Sbjct: 304 EELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTC 363
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ RK L + MK+ + Y +I GR++EA +++M + +
Sbjct: 364 LGKKRKVDEALSLFEVMKKDAEP-NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPN 422
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++ N +++ CK KLE AY + + ++G D T+ LIDGL K G + A E
Sbjct: 423 LLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFE 482
Query: 301 YMNKIGFDSNLEAY-----------------------------------NCIVDRLGKDG 325
M G ++N Y N +D + K G
Sbjct: 483 KMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAG 542
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+++ +FE + + D +YS ++H L KA + S + + + G + A
Sbjct: 543 EVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYN 602
Query: 382 AVVDGLRHSGCRREAKKIQSKIR 404
AVVDG SG +A +I +++
Sbjct: 603 AVVDGFCKSGKVHKAYEILEEMK 625
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 162/357 (45%), Gaps = 5/357 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
MR P Y LI +L+LL +M E+G V + +L+ L + G+
Sbjct: 170 MRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQ 229
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
+A + ++ L P +N+ ++ K D A + F L+ G P+ V+Y
Sbjct: 230 VADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTS 289
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
+I LCKAGRL A + ++ P A Y T++ +++ ++L ++ +G
Sbjct: 290 MIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERG 349
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ +++ K ++ EA E M D + + +YN +I++ C G++E AY
Sbjct: 350 CIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAY 408
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+LDEME + T I++D LCKA ++ A E ++ G + + Y ++D L
Sbjct: 409 RILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGL 468
Query: 322 GKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
GK G++D A +FE M + Y+S++ N R K+ ++ G +
Sbjct: 469 GKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCK 525
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 159/357 (44%), Gaps = 9/357 (2%)
Query: 53 LLDEM--LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 110
+L+EM L G+P ++ L L + + D+A M P + + +++
Sbjct: 131 VLEEMAVLGYGLPNQACAH--LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGA 188
Query: 111 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
L + R + AL + R +Q+ G+ + + L++ L + G++ A ++ E+ S P+
Sbjct: 189 LAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPD 248
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
+ Y + C + + + +K +G D Y ++I K GRL EA +
Sbjct: 249 IVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFA 308
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
QM + +YNT+I Y G+ E AY LL+ + ++G + ++ L K
Sbjct: 309 QMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKR 368
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYS 346
+ A E M K + N YN I+D L G+++ A + + ME F T +
Sbjct: 369 KVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVN 427
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
MV LCKA++L A K+ S + G +++DGL G EA ++ K+
Sbjct: 428 IMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKM 484
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 202/406 (49%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ C+ FD + M + ++PDV ++N LI G R + ++ EM + G
Sbjct: 233 VLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRG 292
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV S++ L+ GK D A ++M L P + +++ G C+ AL
Sbjct: 293 VTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEAL 352
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + G +P++VTYN L+ GLCK RL A +L E+ + G P+ T+TT++
Sbjct: 353 RVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGY 412
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ ++ L++ + + D Y ++I + G L +A + + M + +
Sbjct: 413 CRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNH 472
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y+ LI+ +C++G++E A+ LDEM +G + T+ +I G C++GN+K + L+
Sbjct: 473 VTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQK 532
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M + +L +N ++ K+ + A NVF ME + D+ TY+ +++ +
Sbjct: 533 MMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGN 592
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ A ++ SG+ + ++++G +G +EA ++ ++
Sbjct: 593 MEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEM 638
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 187/377 (49%), Gaps = 4/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ +YC+ + FD T+++ M + + PDVVT+N LI R + ++ L+D M
Sbjct: 162 IMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANK 221
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P + ++NS++ L + + D+A VF+ M + P +FNI++ G C+ + A
Sbjct: 222 GLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEA 281
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ ++ +Q+ G P++V+++ LI G++ A L+E+ G P+ + YT ++
Sbjct: 282 MKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGG 341
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R L + M G D Y T++ K RL +A + + +M GV D
Sbjct: 342 FCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPD 401
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ ++ TLI+ YC++G E A L D + Q D + LIDG+C+ G++ A +
Sbjct: 402 LCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWD 461
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAK 356
M+ N Y+ ++D + G+++ A + M K + TY+S++ C++
Sbjct: 462 DMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSG 521
Query: 357 RLPSASKLLLSCLKSGV 373
+ + L ++ +
Sbjct: 522 NVKKGQQFLQKMMQDNI 538
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 162/308 (52%), Gaps = 2/308 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M+I +C+ S + + M G PDVVTYN+L+ G + L + +LL+EM E
Sbjct: 337 MVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKER 396
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD+ ++ +L+H + G ++A ++F ++ L P +N +++G+C+ A
Sbjct: 397 GVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKA 456
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + P VTY+ILI C+ G++ A L E+ G+ PN +TY +I+K
Sbjct: 457 NELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKG 516
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R+ K G + L M + D + T+I ++K + A + M + VQ D
Sbjct: 517 YCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPD 576
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
V+YN +IN + ++G +E A + +M G E D+YT+ LI+G AGN K A +LH
Sbjct: 577 AVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHD 636
Query: 300 EYMNKIGF 307
E M++ GF
Sbjct: 637 EMMHR-GF 643
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 141/274 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ +LN M+E G++PD+ T+ +LI G R+ +L L D +L
Sbjct: 373 LLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQR 432
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +YNSL+ + + G +AN ++ DM ++ P T++I+++ C+ + A
Sbjct: 433 LRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAF 492
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ G +P ++TYN +IKG C++G ++ + L+++ P+ IT+ T++
Sbjct: 493 GFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGY 552
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + M+++ D Y +I F + G ++EA ++M G++ D
Sbjct: 553 IKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDR 612
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
+Y +LIN + G + A+ L DEM +GF D
Sbjct: 613 YTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 193/395 (48%), Gaps = 4/395 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
I++ + + +P ++ LI T++ + + +L+ +P + N+L+ L
Sbjct: 74 IVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALS 133
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G P A ++ ++ D T NIM++ CK+ D A + ++K P++V
Sbjct: 134 RAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVV 193
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T+N+LI +AG + A ++ + + G P +T+ +++K ++R++ E+ AM
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAM 253
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ D + +I F ++G ++EA + ++M GV D+VS++ LI L+ GK+
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKM 313
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A L EM+ G D +T++I G C+AG++ A + M +G ++ YN +
Sbjct: 314 DHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTL 373
Query: 318 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
++ L K ++ A + M+ + D T+++++H C+ A +L + L +
Sbjct: 374 LNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRL 433
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
R A +++DG+ G +A ++ + +I
Sbjct: 434 RPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREI 468
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 86/170 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID++C+ + + L+ M G P+++TYNS+I G R+ + L +M++
Sbjct: 477 ILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQD 536
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PD+ ++N+L+H + A VF M + P T+N+++NG + + A
Sbjct: 537 NILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEA 596
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
R+F+ + G P+ TY LI G AG + A + E+ G AP+
Sbjct: 597 GRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 200/428 (46%), Gaps = 39/428 (9%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
D Y + ++M + G+SPDVVTYNS+I+ ++ + + +L M++ G P+ ++N
Sbjct: 218 QLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHN 277
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
SL+H GKP++A VF+ M + P T+N ++ LCKN + A ++F + K
Sbjct: 278 SLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKR 337
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G P TY L+ G G L +L + +G P+ + ++ ++ K
Sbjct: 338 GHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDA 397
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS------- 243
+ + S M+R+G D Y V+ A +G++ +A +++++G+ D V
Sbjct: 398 MLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHG 457
Query: 244 ----------------------------YNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
+NTL+N CKEG + A + D M + + D
Sbjct: 458 LCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRD 517
Query: 276 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
T+ LIDG C G + A LE M G N YN +++ K+G+I+ A ++F
Sbjct: 518 VITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFR 577
Query: 336 SMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
M K TYS+++ L +A+R +A +L L +KSG++ ++ GL +
Sbjct: 578 QMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNN 637
Query: 392 CRREAKKI 399
C +A +I
Sbjct: 638 CTDDALRI 645
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 176/361 (48%), Gaps = 6/361 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAG-ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
I + M + G P+ TY +L+ G AT SL+ LLD M+ GI PD + +N L+
Sbjct: 330 IFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMH-HLLDMMVRNGIQPDHYIFNILIGTY 388
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ GK D+A +F M L P T T+ I+++ LC D+A+ F L G P+
Sbjct: 389 TKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDA 448
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
V + LI GLC + A + E+ G PN I + T++ + I
Sbjct: 449 VVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDL 508
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M R D Y T+I + G++ EA +E MV DGV+ + V+YNT+IN YCK G+
Sbjct: 509 MVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGR 568
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+E A+ L +M +G T++ ++ GL +A A+ +M K G ++ YN
Sbjct: 569 IEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNI 628
Query: 317 IVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
I+ L ++ D A+ +F+++ + D + T++ M+ L K R A L S L G
Sbjct: 629 ILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARG 688
Query: 373 V 373
+
Sbjct: 689 L 689
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 177/384 (46%), Gaps = 11/384 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL-LDEMLE 59
++ID + D + L R+ +G + + +T++ L+ S ++D+ L M
Sbjct: 96 VVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPV 155
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT-----PCTATFNIMLNGLCKN 114
+G P+V+SY L+ L + +A + M+ D T P ++N ++NGL +
Sbjct: 156 LGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLRE 215
Query: 115 -RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
R D A +F + G P++VTYN +I L KA + A +L + +G PN IT
Sbjct: 216 GRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRIT 275
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
+ +++ + K + + M R G D F Y T++ K GR EA + MV
Sbjct: 276 HNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMV 335
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
G + + +Y TL++ Y EG L + LLD M + G + D Y ILI K G +
Sbjct: 336 KRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVD 395
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMV 349
A L M + G + + Y ++D L GK+D A+ F + D+ + +++
Sbjct: 396 DAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLI 455
Query: 350 HNLCKAKRLPSASKLLLSCLKSGV 373
H LC + A +L + + G+
Sbjct: 456 HGLCARDKWDKAEELAVEMIGRGI 479
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 176/407 (43%), Gaps = 39/407 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI Y + D + ++MR G++PD VTY ++ + ++ ++
Sbjct: 383 ILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISE 442
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD + +L+H L K D+A + +MI + P FN +LN LCK A
Sbjct: 443 GLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARA 502
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + + +++TYN LI G C G++ A +L+ + G PN +TY T++
Sbjct: 503 KNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMIN- 561
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
GYC K GR+++A QM + GV
Sbjct: 562 ---------------------------GYC-------KNGRIEDAFSLFRQMASKGVNPG 587
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+Y+T++ + + AA L M K G + D T+ I++ GLC+ A +
Sbjct: 588 IVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQ 647
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
+ I F +N ++D L K G+ D A ++F S+ V + TY M+ +L +
Sbjct: 648 NLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQG 707
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L L LS K+G A+V L G R+A SKI
Sbjct: 708 LLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKI 754
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 182/417 (43%), Gaps = 54/417 (12%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG---IPPDVWSYNSLMHCLFQLGKPDE 84
+ +V N ++ A R+S + ++ L M+ + +PP++ +Y+ ++ C ++G D
Sbjct: 51 TSSIVDLNRALSDAARHSP-AVAISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDL 109
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT----DNALR----------------MF 124
A +I T TF+ +L LC + T D ALR +
Sbjct: 110 AFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILL 169
Query: 125 RGL---------------------QKHGFVPELVTYNILIKGLCKAGR-LRTARWILKEL 162
+GL + G+ P++V+YN +I GL + GR L TA + ++
Sbjct: 170 KGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQM 229
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
D G +P+ +TY +I+ + R +L M + G + + +++ + G+
Sbjct: 230 LDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKP 289
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
+A ++M DGV+ D+ +YNTL+ CK G+ A + D M K+G + + T+ L
Sbjct: 290 NDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTL 349
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 340
+ G G++ L+ M + G + +N ++ K GK+D A+ +F M +
Sbjct: 350 LHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGL 409
Query: 341 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
D+ TY ++ LC ++ A + G+ + V L H C R+
Sbjct: 410 NPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGL----TPDAVVFRNLIHGLCARD 462
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 158/335 (47%), Gaps = 5/335 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C +D + M GI P+ + +N+L+ + +++ + ++ D M+ +
Sbjct: 454 LIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVD 513
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ DV +YN+L+ +CL GK DEA ++ + M+ + P T+N M+NG CKN ++
Sbjct: 514 VQRDVITYNTLIDGYCLH--GKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIED 571
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +FR + G P +VTY+ +++GL +A R A+ + + SG + TY I+
Sbjct: 572 AFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILL 631
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+N L I + + + + +I A +K GR EA D ++ G+
Sbjct: 632 GLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVP 691
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
++V+Y ++ ++G LE L +EK G + L+ L + G ++ A ++L
Sbjct: 692 NVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYL 751
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
+++ F +V L GK D IN
Sbjct: 752 SKIDENNFSLEASTAESLV-LLVSSGKYDQHINAI 785
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 195/399 (48%), Gaps = 4/399 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C +++RM E G P ++T N+L+ G N +S ++ L+D M+E G
Sbjct: 148 LINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETG 207
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y ++ + + G+ A + + M + ++I+++GLCK+ DNA
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ GF +++ Y LI+G C AGR +L+++ P+ + ++ ++ C
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + E+ M ++G + D Y ++I F K +L +A ++ MV+ G +I
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++N LIN YCK ++ L +M +G D T+ LI G C+ G ++ A+ +
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M ++ +Y ++D L +G+ + A+ +FE +E D Y+ ++H +C A +
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 507
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ A L S GV+ ++ GL G EA
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 198/403 (49%), Gaps = 4/403 (0%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
+D + +M GI+ ++ T + +I R LS + + +++++G PD +++
Sbjct: 87 QYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFS 146
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+L++ L G+ EA + M+ P T N ++NGLC N +A+ + + +
Sbjct: 147 TLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVET 206
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
GF P VTY ++K +CK+G+ A +L+++ + +A+ Y+ I+ ++
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA 266
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+ + M+ KG+ D Y T+I F GR + + M+ + D+V+++ LI+
Sbjct: 267 FNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC 326
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+ KEGKL A L EM ++G D T+T LIDG CK + A L+ M G N
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLL 366
+ +N +++ K ID + +F M V D+ TY++++ C+ +L A +L
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+ VR + K ++DGL +G +A +I KI +K+
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 163/329 (49%), Gaps = 1/329 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C +D G +L M + I+PDVV +++LI + L + +L EM++ G
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD +Y SL+ + + D+AN + M+ P TFNI++NG CK D+ L
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + G V + VTYN LI+G C+ G+L A+ + +E+ P+ ++Y ++
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N + + LEI +++ D Y +I ++ +A D + GV+ D+
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDV 527
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN +I CK+G L A LL +ME+ G + T+ ILI G+ + +E
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
+ + GF + +VD L DG++ +
Sbjct: 588 IKRCGFSVDASTVKMVVDMLS-DGRLKKS 615
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 147/296 (49%), Gaps = 4/296 (1%)
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
D+A+ +F+ + + P L+ ++ L + + + + K++ G A N T + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ CC R RK L + + + GY D + T+I GR+ EA + +++MV G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+ +++ N L+N C GK+ A LL+D M + GF+ ++ T+ ++ +CK+G A
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 353
L M + + Y+ I+D L KDG +D+A N+F ME+K D Y++++ C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
A R +KLL +K + A A++D G REA+++ ++ IS
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 116/225 (51%), Gaps = 1/225 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ D G + +M G+ D VTYN+LI G L + +L EM+
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+ SY L+ L G+P++A +F+ + + +NI+++G+C D+A
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F L G P++ TYNI+I GLCK G L A + +++ + GH+PN TY +++
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
+++ +KR G++ D ++ + GRLK++
Sbjct: 572 HLGEGDATKSAKLIEEIKRCGFSVDA-STVKMVVDMLSDGRLKKS 615
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I C D + + + G+ PDV TYN +I G + LS + L +M E
Sbjct: 497 IIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CG---DLTPCTATFNIMLNGLCKNRY 116
G P+ +YN L+ G ++ ++ +++ CG D + +++ +G K +
Sbjct: 557 GHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSF 616
Query: 117 TD 118
D
Sbjct: 617 LD 618
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 200/442 (45%), Gaps = 40/442 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID + + D Y + +M E +SPDVVTYNSLI G + + S +L++M++ G
Sbjct: 163 LIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAG 222
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+ +YNSL++ G E+ RVF++M L PC N ++ LC++ A
Sbjct: 223 IRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAK 282
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + G P +++Y+ L+ G G ++ + G PN + ++
Sbjct: 283 DIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAY 342
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL-- 239
R + I M+ KG D + TVI++ +IGRL +A MV GV
Sbjct: 343 ARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSE 402
Query: 240 --------------------DIVS--------------YNTLINLYCKEGKLEAAYLLLD 265
+++S ++++IN KEG++ ++D
Sbjct: 403 AVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMD 462
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M + G + T L++G C GN++ A L+ M IG + N Y +VD K+G
Sbjct: 463 LMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNG 522
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+ID A+ VF M K S Y+ ++H L +A+R +A K+ ++SG +
Sbjct: 523 RIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYG 582
Query: 382 AVVDGLRHSGCRREAKKIQSKI 403
V+ GL + C EA + K+
Sbjct: 583 VVLGGLCRNNCTDEANMLLEKL 604
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 182/407 (44%), Gaps = 5/407 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI Y + + M +G+ P VV NS I R++ + + D+ D M+ G
Sbjct: 233 LIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKG 292
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P++ SY++L+H G N + M+ + P FNI++N + D A+
Sbjct: 293 PKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAM 352
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +Q G +P+ VT+ +I LC+ GRL A + D G P+ Y +++ C
Sbjct: 353 LIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGC 412
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGY-CTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + E++S M K G Y ++I K GR+ E D M+ MV G + +
Sbjct: 413 CNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPN 472
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V++N+L+ YC G +E A+ LLD M G E + Y + L+DG CK G I A
Sbjct: 473 VVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFR 532
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAK 356
M G YN I+ L + + A +F ES TY ++ LC+
Sbjct: 533 DMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNN 592
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A+ LL V+ V+ + G R+EAK++ + I
Sbjct: 593 CTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAI 639
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 164/355 (46%), Gaps = 5/355 (1%)
Query: 25 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 84
A +P + TYN LI R +L + +L G+ PDV SYN+L+ + G+ D+
Sbjct: 116 AADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDK 175
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
A +F MI ++P T+N +++GLCK + + R+ + G P TYN LI
Sbjct: 176 AYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIY 235
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
G AG + + + KE+ SG P + + + R+ + K +I +M KG
Sbjct: 236 GYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKP 295
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ Y T++ + G + MV+ G+ + +N LIN Y + G ++ A L+
Sbjct: 296 NIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIF 355
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
++M+ +G D T +I LC+ G + A +M IG + Y C++
Sbjct: 356 EDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNH 415
Query: 325 GKIDHAINVFESMEVKDSFT-----YSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
G++ A + M KD +SS+++NL K R+ ++ +++G R
Sbjct: 416 GELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQR 470
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 177/409 (43%), Gaps = 8/409 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+AY + D I M+ G+ PD VT+ ++I+ R L +L + M+++
Sbjct: 337 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 396
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT-FNIMLNGLCKNRYTDN 119
G+PP Y L+ G+ +A + +M+ D+ P F+ ++N L K
Sbjct: 397 GVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAE 456
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+ + + G P +VT+N L++G C G + A +L + G PN Y T++
Sbjct: 457 GKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 516
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+N + L + M KG Y ++ + R A +M+ G +
Sbjct: 517 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTV 576
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
I +Y ++ C+ + A +LL+++ + D T I+I + K G + A+
Sbjct: 577 SIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELF 636
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
++ G + YN ++ L K+ + A N+F S+E DS + +V L K
Sbjct: 637 AAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKK 696
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGL--RHSGCRREAKKIQSK 402
+ AS LS + L+++ +++ L R CR K + +K
Sbjct: 697 AEVAKASN-YLSIIDENNLTLEASTISLLASLFSREGKCREHIKLLPAK 744
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 185/369 (50%), Gaps = 17/369 (4%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F+ + + ++G PD V Y + A L +L+ M++ G+ P V++YN
Sbjct: 138 FEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNL 197
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
++ L ++ + +A ++F +MI ++ P T T+N +++G CK + AL +++
Sbjct: 198 VLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQN 257
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
LVTYN L+ GLC +GR+ AR +L E+ SG P + F + G
Sbjct: 258 VECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGG-----FLSFVFDDHSNGAGD 312
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+ L K D YC ++ ++GR+++A + + ++V +GV +SYN L+N Y
Sbjct: 313 DGL--FDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAY 370
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
C+EG ++ A L ++ME++G E ++ T +I C+ G + A + M + G +
Sbjct: 371 CQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTV 430
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESMEVKDS-------FTYSSMVHNLCKAKRLPSASKL 364
E YN +++ G+ G H + FE ++ D +Y S+++ LCK ++L A +
Sbjct: 431 ETYNSLINGYGQKG---HFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIV 487
Query: 365 LLSCLKSGV 373
L + GV
Sbjct: 488 LADMIGRGV 496
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 168/363 (46%), Gaps = 34/363 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C+ D T + RM E G+SP V TYNSLI G + + LDEM + G
Sbjct: 401 VISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAG 460
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V SY SL++CL + K +A V DMI ++P +N+++ C +A
Sbjct: 461 IKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAF 520
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R F + + G LVTYN LI GL + GR++ A + ++ G P+ ITY +++
Sbjct: 521 RFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGY 580
Query: 182 FRNRKYKLGLEILSAMKRKGY-----TF-----------------------------DGF 207
++ + LE+ MK G TF D F
Sbjct: 581 AKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEMLQMDLVPDQF 640
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y +I ++ + G + +A +QMV GV D V+YN+LI Y ++ ++ L+D+M
Sbjct: 641 VYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDM 700
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
+ +G T+ ILI GLC + GA M + G N+ ++ L ++G +
Sbjct: 701 KAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGML 760
Query: 328 DHA 330
A
Sbjct: 761 REA 763
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 185/403 (45%), Gaps = 34/403 (8%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
+ A D G+ ++ M + G+ P V YN ++ G + + + L DEM++ +
Sbjct: 164 VQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNM 223
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P+ +YN+L+ ++G +EA + M ++ T+N +LNGLC + D+A
Sbjct: 224 VPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDARE 283
Query: 123 MFRGLQKHGFVP----------------------------ELVTYNILIKGLCKAGRLRT 154
+ ++ GF+P + TY IL+ GLC+ GR+
Sbjct: 284 VLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEK 343
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
A +L +L ++G P+ I+Y ++ + K + M+ +G + + TVI+
Sbjct: 344 AEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVIS 403
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
F + G + A ++ +MV GV + +YN+LIN Y ++G + LDEM+K G +
Sbjct: 404 KFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKP 463
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
+ ++ LI+ LCK + A + L M G N E YN +++ K+ A F
Sbjct: 464 NVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFF 523
Query: 335 ESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
+ M ++ TY+++++ L + R+ A L L G
Sbjct: 524 DEM-IQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKG 565
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 179/387 (46%), Gaps = 32/387 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ C+ + + M + + P+ VTYN+LI G + + +L + M E
Sbjct: 197 LVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQ 256
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPC-------------------- 100
+ ++ +YNSL++ L G+ D+A V +M P
Sbjct: 257 NVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLF 316
Query: 101 --------TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
T+ I+LNGLC+ + A + L ++G P ++YNIL+ C+ G +
Sbjct: 317 DGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDV 376
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
+ A +++ + G PN IT+ T++ + + M KG + Y ++
Sbjct: 377 KKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSL 436
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I + + G +++++M G++ +++SY +LIN CK+ KL A ++L +M +G
Sbjct: 437 INGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGV 496
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
+ + +LI+ C +K A + M + G D+ L YN +++ LG++G++ A +
Sbjct: 497 SPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAED 556
Query: 333 VFESMEVK----DSFTYSSMVHNLCKA 355
+F M K D TY+S++ K+
Sbjct: 557 LFLQMAGKGCNPDVITYNSLISGYAKS 583
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/449 (21%), Positives = 197/449 (43%), Gaps = 40/449 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ C+ + +L ++ E G++P ++YN L+ + + ++ ++M E
Sbjct: 330 ILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEER 389
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ ++N+++ + G+ D A + M+ ++P T+N ++NG + +
Sbjct: 390 GLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRC 449
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ K G P +++Y LI LCK +L A +L ++ G +PNA Y +++
Sbjct: 450 FEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEA 509
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K K M + G Y T+I + GR+K+A D QM G D
Sbjct: 510 SCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPD 569
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG------------FEC-------------- 274
+++YN+LI+ Y K + L D+M+ G + C
Sbjct: 570 VITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQE 629
Query: 275 --------DKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
D++ + +I + GN+ K LH + +++ G D + YN ++ +D
Sbjct: 630 MLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQ-GVDCDKVTYNSLILAYLRDR 688
Query: 326 KIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
++ ++ + M+ K TY+ ++ LC K A ++ G+ + S
Sbjct: 689 RVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCY 748
Query: 382 AVVDGLRHSGCRREAKKIQSKIRMAKISH 410
++ GLR G REA+ + S++ + +++
Sbjct: 749 QLISGLREEGMLREAQIVSSELSIGGLNN 777
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 164/350 (46%), Gaps = 3/350 (0%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
I D TY L+ G R + + ++L +++E G+ P SYN L++ Q G +A
Sbjct: 321 IRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAI 380
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ M L P TFN +++ C+ D+A R + + G P + TYN LI G
Sbjct: 381 LTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGY 440
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
+ G L E+ +G PN I+Y +++ C ++RK +L+ M +G + +
Sbjct: 441 GQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNA 500
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I A + +LK+A + ++M+ G+ +V+YNTLIN + G+++ A L +
Sbjct: 501 EIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQ 560
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M +G D T+ LI G K+ N + + M +G + ++ ++ K+G
Sbjct: 561 MAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGV 620
Query: 327 I--DHAINVFESME-VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ D M+ V D F Y+ M+++ + + A L + GV
Sbjct: 621 VTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGV 670
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 141/288 (48%), Gaps = 6/288 (2%)
Query: 111 LCK-NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 169
LC ++ D A ++ ++K GFVP + N L++ L + + ++ DSG P
Sbjct: 96 LCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRP 155
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
+A+ Y ++ + G E++ +M + G F Y V+ K+ R+K+A
Sbjct: 156 DAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLF 215
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
++M+ + + V+YNTLI+ YCK G +E A + M++Q EC+ T+ L++GLC +
Sbjct: 216 DEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGS 275
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-DSFTYSSM 348
G + AR L M GF + V +G D + F+ E++ D TY +
Sbjct: 276 GRVDDAREVLLEMEGSGFLPG--GFLSFVFDDHSNGAGDDGL--FDGKEIRIDERTYCIL 331
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
++ LC+ R+ A ++L +++GV K + +V+ G ++A
Sbjct: 332 LNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKA 379
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 214/478 (44%), Gaps = 75/478 (15%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ Y + D G + R+ G+ PDV +YN+LI G ++ + + DL +M E
Sbjct: 194 ILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQ 253
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+V +Y+SL++ L + + D+A RV + M+ + P T+N +++G + +
Sbjct: 254 GIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKES 313
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT---- 176
+R+F+ + VP++ N + LCK GR++ AR I + G P+ I+Y
Sbjct: 314 VRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHG 373
Query: 177 ---------------IMKC-----------CFRNRKYKLG-----LEILSAMKRKGYTFD 205
+M C N +LG L + M ++G D
Sbjct: 374 YATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPD 433
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN-------------------- 245
+ TVI+AF ++GRL +A + M+ GV D Y+
Sbjct: 434 IITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELIS 493
Query: 246 ----------------TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
++IN CKEG++ ++D + G + T L+DG C
Sbjct: 494 DMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLV 553
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 345
GN+K A L+ M +G + ++ YN +VD K G+ID A+ +F M K S +Y
Sbjct: 554 GNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSY 613
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ ++H L +A+R A ++ ++SG+ + V+ GL + C EA + K+
Sbjct: 614 NIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKL 671
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 195/442 (44%), Gaps = 40/442 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL----------LSCSL 51
LI+ C+ D +L +M AG+ P+ +TYN LI G + + + +S SL
Sbjct: 265 LINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSL 324
Query: 52 -------------------------DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
D+ D M+ G PDV SY +L+H G +
Sbjct: 325 LVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMD 384
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+F M+C + P FN ++N + D +L MF + K G P+++T++ +I
Sbjct: 385 NLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAF 444
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C+ GRL A + D+G P+ Y+ +++ R E++S M KG
Sbjct: 445 CRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPC 504
Query: 207 FGYCT-VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ T +I K GR+ E D ++ ++ G + +++++N+L++ YC G ++ A LLD
Sbjct: 505 IKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLD 564
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
ME G E D YT+ L+DG CK G I A M +YN I+ L +
Sbjct: 565 SMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQAR 624
Query: 326 KIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+ A +F ES TY++++ LC+ A+ LL V+
Sbjct: 625 RTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFN 684
Query: 382 AVVDGLRHSGCRREAKKIQSKI 403
V+ + G R+EAK++ + I
Sbjct: 685 IVIRAMFKVGRRQEAKELFAAI 706
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 171/374 (45%), Gaps = 5/374 (1%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
+P + TYN LI R L + +L G+ PDV+SYN+L+ + G+ D+A+
Sbjct: 186 APTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHD 245
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
+F M + P T++ ++NGLCK + D A R+ R + G P +TYN LI G
Sbjct: 246 LFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYS 305
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
+G + + + KE+ S P+ + M ++ + K +I +M KG D
Sbjct: 306 TSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVI 365
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y ++ + G + + MV +GV D +NTLIN Y + G ++ + L+ ++M
Sbjct: 366 SYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDM 425
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
KQG D T + +I C+ G + A +M G + Y+C++ +
Sbjct: 426 TKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDL 485
Query: 328 DHAINVFESMEVKDSFT-----YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
A + M K ++S+++NLCK R+ ++ + +G R +
Sbjct: 486 VKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNS 545
Query: 383 VVDGLRHSGCRREA 396
+VDG G +EA
Sbjct: 546 LVDGYCLVGNMKEA 559
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 149/340 (43%), Gaps = 1/340 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I A+C+ D N M + G+ PD Y+ LI G L + +L+ +ML G
Sbjct: 440 VISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKG 499
Query: 62 IPPD-VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
IPP + + S+++ L + G+ E V +I P TFN +++G C A
Sbjct: 500 IPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEA 559
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + ++ G P++ TYN L+ G CK GR+ A + +++ +++Y I+
Sbjct: 560 VGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHG 619
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+ R+ + E+ M G Y TV+ + EA +E++ + V+ D
Sbjct: 620 LFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFD 679
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I+++N +I K G+ + A L + G T+ ++I L K + + A
Sbjct: 680 ILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFS 739
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
M K + N I+ L G++ A N ++ K
Sbjct: 740 SMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKK 779
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 126/265 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D YC + +L+ M G+ PD+ TYN+L+ G ++ + +L L +ML
Sbjct: 546 LVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKR 605
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ SYN ++H LFQ + A +F +MI + T+ +L GLC+N TD A
Sbjct: 606 VTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEAN 665
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L +++T+NI+I+ + K GR + A+ + + G P +TY ++
Sbjct: 666 MLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNL 725
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ + S+M++ T D +I + G + +A +Y+ ++ G+ +
Sbjct: 726 IKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEA 785
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDE 266
+ + LI L+ GK LL E
Sbjct: 786 TTTSLLIYLFSVNGKYREYIKLLPE 810
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 154/357 (43%), Gaps = 19/357 (5%)
Query: 53 LLDEML-EMGIPPDVWSYNSLMHCLFQLGK-------PDEANRVFQDM---ICGDLTPCT 101
L DE+L P N L+ L + P A +F+ M C + P
Sbjct: 130 LFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELFKRMDRCACPEAAPTI 189
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
T+NI++N + R D L +F L + G P++ +YN LI G K G + A + +
Sbjct: 190 YTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYK 249
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ + G PN +TY++++ + ++ +L M G + Y +I + G
Sbjct: 250 MEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGM 309
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
KE+ ++M + + D+ + N+ + CK G+++ A + D M +G + D ++
Sbjct: 310 WKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGA 369
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 340
L+ G AG I G M G + +N +++ + G +D ++ +FE M +
Sbjct: 370 LLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQG 429
Query: 341 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
D T+S+++ C+ RL A + + +GV AV L C R
Sbjct: 430 VNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGV----PPDTAVYSCLIQGQCNR 482
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 140/282 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ G +++ + G P+++T+NSL+ G + ++ LLD M +G
Sbjct: 511 IINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVG 570
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+++YN+L+ + G+ D+A +F+DM+ +T + ++NI+L+GL + R T A
Sbjct: 571 VEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAK 630
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
MF + + G + TY ++ GLC+ A +L++L + +T+ +++
Sbjct: 631 EMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAM 690
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ + + E+ +A+ G Y +I +K ++A + M D
Sbjct: 691 FKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDS 750
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
N +I + +G++ A L +++K+G + T ++LI
Sbjct: 751 RILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI 792
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Query: 277 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
YT+ ILI+ +A + + G ++ +YN ++D K+G++D A ++F
Sbjct: 190 YTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYK 249
Query: 337 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 392
ME + + TYSS+++ LCK K + A ++L + +GVR ++ G SG
Sbjct: 250 MEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGM 309
Query: 393 RREAKKI 399
+E+ ++
Sbjct: 310 WKESVRV 316
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 195/413 (47%), Gaps = 50/413 (12%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE--MLEM 60
I C+ + +++RM G +P+ TY L+ G C + +DE ML
Sbjct: 312 IHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGL-------CRMGKVDEARMLLN 364
Query: 61 GIP-PDVWSYNSLMHCLFQLGKPDEANRVFQD-MICGDLTPCTATFNIMLNGLCKNRYTD 118
+P P+V +N+L++ G+ DEA V + M+ P T+N ++ GLCK Y
Sbjct: 365 KVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLV 424
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
+A + +Q G P ++TY ILI CK GRL AR +L E+ G A NA+ Y ++
Sbjct: 425 SARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLI 484
Query: 179 KCCFRNRKYKLGLEILSAMKRKG-----YTFDG--FGYC--------------------- 210
++ K + L + M KG +TF+ FG C
Sbjct: 485 SALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVI 544
Query: 211 -------TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
T+I AF++ G ++EA + M+ G LD ++YN LI C+ G +E L
Sbjct: 545 ANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLAL 604
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
++M +G + + ILI+GLC+ GNI+ A L M G ++ YN +++ L K
Sbjct: 605 FEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCK 664
Query: 324 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
G+ A+N+F+ ++V+ D+ TY++++ CK A LL + SG
Sbjct: 665 TGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSG 717
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 191/404 (47%), Gaps = 48/404 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C V + Y +L++ GISP V T+ ++ + + + LL +M
Sbjct: 209 VLLAGNCPKVVPNVFYEMLSK----GISPTVYTFGVVMKALCLVNEVDSACALLKDMTRH 264
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ Y +L+H L ++G+ +E ++ ++M+ P TFN ++GLCK A
Sbjct: 265 GCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEA 324
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + GF P TY +L+ GLC+ G++ AR +L ++ + PN + + T+
Sbjct: 325 AKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTL--- 377
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM-EQMVTDGVQL 239
I +V GRL EA M E M++ G
Sbjct: 378 --------------------------------INGYVSRGRLDEAKAVMHESMLSVGCGP 405
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DI +YNTLI CK+G L +A L++EM+ +G E + T+TILID CK G ++ AR L
Sbjct: 406 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 465
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ M+ G N YNC++ L KD K+ A+N+F M K D FT++S++ LCK
Sbjct: 466 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 525
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ A L L GV ++ G +EA K+
Sbjct: 526 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKL 569
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 187/388 (48%), Gaps = 9/388 (2%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G PDV T+N I G + + + L+D ML G P+ ++Y LMH L ++GK DEA
Sbjct: 300 GCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA 359
Query: 86 NRVFQDMICGDLTPCTATFNIMLNG-LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
+ + P FN ++NG + + R + M + G P++ TYN LI
Sbjct: 360 RMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLIL 415
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
GLCK G L +AR ++ E+ G PN ITYT ++ + + + +L M KG
Sbjct: 416 GLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLAL 475
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ GY +I+A K ++++A + M + G + DI ++N+LI CK K E A L
Sbjct: 476 NAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLY 535
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+M +G + T+ LI + G ++ A + M G + YN ++ L +
Sbjct: 536 QDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRA 595
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
G I+ + +FE M K ++ + + +++ LC+ + A + L + G+
Sbjct: 596 GNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTY 655
Query: 381 KAVVDGLRHSGCRREAKKIQSKIRMAKI 408
++++GL +G +EA + K+++ I
Sbjct: 656 NSLINGLCKTGRAQEALNLFDKLQVEGI 683
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 153/291 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID +C+ + +L+ M G++ + V YN LI+ ++ + +L++ +M
Sbjct: 447 ILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSK 506
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD++++NSL+ L ++ K +EA ++QDM+ + T T+N +++ + A
Sbjct: 507 GCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEA 566
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L++ + G + +TYN LIK LC+AG + + +++ G PN I+ ++
Sbjct: 567 LKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILING 626
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + LE L M +G T D Y ++I K GR +EA + +++ +G+ D
Sbjct: 627 LCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPD 686
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
++YNTLI+ +CKEG + A+LLL GF ++ T IL+ K G+
Sbjct: 687 AITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 737
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 193/401 (48%), Gaps = 9/401 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ A C D+ +L M G P+ + Y +LI ++ ++ L LL+EML M
Sbjct: 240 VVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLM 299
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV ++N +H L ++ + EA ++ M+ TP + T+ ++++GLC+ D A
Sbjct: 300 GCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA 359
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE-LGDSGHAPNAITYTTIMK 179
+ + P +V +N LI G GRL A+ ++ E + G P+ TY T++
Sbjct: 360 RMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLIL 415
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ E+++ M+ KG + Y +I F K GRL+EA + +++M G+ L
Sbjct: 416 GLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLAL 475
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ V YN LI+ CK+ K++ A + +M +G + D +T LI GLCK + A
Sbjct: 476 NAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLY 535
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ M G +N YN ++ + G + A+ + M + D TY+ ++ LC+A
Sbjct: 536 QDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRA 595
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ L + G+ + +++GL +G + A
Sbjct: 596 GNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHA 636
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 152/324 (46%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + ++N M+ G P+V+TY LI + L + ++LDEM G
Sbjct: 413 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 472
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ + YN L+ L + K +A +F DM P TFN ++ GLCK + AL
Sbjct: 473 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 532
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + G + +TYN LI + G ++ A ++ ++ G + ITY ++K
Sbjct: 533 GLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKAL 592
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + GL + M KG + +I + G ++ A +++ M+ G+ DI
Sbjct: 593 CRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDI 652
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN+LIN CK G+ + A L D+++ +G D T+ LI CK G A L L
Sbjct: 653 VTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSR 712
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDG 325
GF N + +V K+G
Sbjct: 713 GVDSGFIPNEVTWYILVSNFIKEG 736
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 135/294 (45%), Gaps = 49/294 (16%)
Query: 80 GKPDEANRVFQDMICGDLTPCTATF---NIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
G P +A R+ DM + C TF N++L+ L +F + G P +
Sbjct: 178 GLPGQATRLLLDM--RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTV 235
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
T+ +++K LC + +A +LK++ G PNAI Y
Sbjct: 236 YTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQ--------------------- 274
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
T+I A K+GR+ E +E+M+ G D+ ++N I+ CK +
Sbjct: 275 --------------TLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLR 320
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+ A L+D M +GF + +T+ +L+ GLC+ G + AR+ L NK+ + N+ +N
Sbjct: 321 IHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL---NKVP-NPNVVLFNT 376
Query: 317 IVDRLGKDGKIDHAINVF-ESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 365
+++ G++D A V ESM D FTY++++ LCK L SA +L+
Sbjct: 377 LINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELM 430
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 97/225 (43%), Gaps = 9/225 (4%)
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV---QLDIV 242
++K +L MK++G F + ++ + + G +AT + M GV +
Sbjct: 144 EFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM--RGVYSCEPTFR 201
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
SYN ++++ + + EM +G YT +++ LC + A L+ M
Sbjct: 202 SYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDM 261
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRL 358
+ G N Y ++ L K G+++ + + E M + D T++ +H LCK R+
Sbjct: 262 TRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRI 321
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A+KL+ L G ++ GL G EA+ + +K+
Sbjct: 322 HEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV 366
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 103/250 (41%), Gaps = 3/250 (1%)
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHAPNAITYT 175
T +AL M +++ G V + +++K +AG A R +L G P +Y
Sbjct: 147 TTDALLM--QMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYN 204
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
++ K+ + M KG + + + V+ A + + A ++ M
Sbjct: 205 VVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRH 264
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G + + Y TLI+ K G++ LL+EM G D T I GLCK I A
Sbjct: 265 GCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEA 324
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA 355
++ M GF N Y ++ L + GK+D A + + + ++++++
Sbjct: 325 AKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSR 384
Query: 356 KRLPSASKLL 365
RL A ++
Sbjct: 385 GRLDEAKAVM 394
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 197/407 (48%), Gaps = 4/407 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I C+ ++ +M++ G++PD+VTYN+LI G + LL S+ L +EM M
Sbjct: 137 IMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFM 196
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +YN+L++ + A F++M DL P +++ +++ LCK A
Sbjct: 197 GCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMA 256
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ F + + G +P TY+ LI CKAG L A + E+ N +TYTT++
Sbjct: 257 IKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDG 316
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
E+ AM + G T + Y +I +K+ + +A + +M ++ D
Sbjct: 317 LCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPD 376
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I+ + T++ C E KLE +++ EM++ G + +T L+D KAGN A LE
Sbjct: 377 ILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLE 436
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAK 356
M +G + + + ++D L K G + AI F M D Y++++ LCK
Sbjct: 437 EMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNN 496
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ A KL + K A A++DG G +EA +++K+
Sbjct: 497 CIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKM 543
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 176/380 (46%), Gaps = 4/380 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P +++L + +L + M + + P S N+ +H L + G+ D +
Sbjct: 60 PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
F+DM+ + P T+NIM+ +CK A +F ++K G P++VTYN LI G K
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
G L + + +E+ G P+ ITY ++ + + E MK K +
Sbjct: 180 IGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVIS 239
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y T+I A K G ++ A + M G+ + +Y++LI+ CK G L A++L DEM
Sbjct: 240 YSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEML 299
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
++ + + T+T L+DGLC+ G + A M K G NL+AY ++ K +D
Sbjct: 300 QEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMD 359
Query: 329 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 384
A+ +F M K D + ++V LC +L ++ +SG+ ++
Sbjct: 360 KAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLM 419
Query: 385 DGLRHSGCRREAKKIQSKIR 404
D +G R EA + ++R
Sbjct: 420 DAYFKAGNRTEAINLLEEMR 439
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 158/329 (48%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LIDA C+ M G+ P+ TY+SLI + L + L DEML+
Sbjct: 243 LIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEH 302
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ ++ +Y +L+ L + G +EA +F+ M +TP + +++G K R D A+
Sbjct: 303 VDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAM 362
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++ P+++ + ++ GLC +L + I+ E+ +SG N + YTT+M
Sbjct: 363 ELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAY 422
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ + +L M+ G +C +I K G ++EA Y +M +Q ++
Sbjct: 423 FKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNV 482
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
Y LI+ CK + A L DEM+ + DK +T +IDG K GN + A
Sbjct: 483 AVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNK 542
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
M ++G + +L AY +V L + G++ A
Sbjct: 543 MMEMGIELDLYAYTSLVWGLSQCGQVQQA 571
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 186/424 (43%), Gaps = 41/424 (9%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
RM + + P + N+ + ++ S D +M+ GI P V++YN ++ + + G
Sbjct: 87 RMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEG 146
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
A +F+ M LTP T+N +++G K D ++ +F ++ G P+++TYN
Sbjct: 147 DMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYN 206
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
LI CK + A +E+ D PN I+Y+T++ + ++ ++ M R
Sbjct: 207 ALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRV 266
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G + F Y ++I A K G L EA ++M+ + V L+IV+Y TL++ C+EG + A
Sbjct: 267 GLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEA 326
Query: 261 YLLLDEMEKQGFECDKYTHTILID-----------------------------------G 285
L M K G + +T LI G
Sbjct: 327 EELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWG 386
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-----EVK 340
LC ++ ++ + M + G +N Y ++D K G AIN+ E M EV
Sbjct: 387 LCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVT 446
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 400
T+ +++ LCK + A ++ + A++DGL + C +AKK+
Sbjct: 447 -VVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLF 505
Query: 401 SKIR 404
+++
Sbjct: 506 DEMQ 509
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 126/271 (46%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + + S D + N MRE I PD++ + +++ G S L ++ EM E G
Sbjct: 348 LIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESG 407
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I + Y +LM F+ G EA + ++M TF +++GLCK A+
Sbjct: 408 IGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAI 467
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F + H P + Y LI GLCK + A+ + E+ D P+ I YT ++
Sbjct: 468 YYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGN 527
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ ++ L + + M G D + Y +++ + G++++A ++ +M+ G+ D
Sbjct: 528 LKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDE 587
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
L+ + + G ++ A L +E+ ++G
Sbjct: 588 TLCTRLLRKHYELGNIDEAIELQNELVEKGL 618
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 134/294 (45%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+ + + M +AG++P++ Y +LI G + + +++L +EM E
Sbjct: 313 LLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKD 372
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+ + +++ L K +E + +M + + +++ K A+
Sbjct: 373 IKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAI 432
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++ G +VT+ LI GLCK G ++ A + + D PN YT ++
Sbjct: 433 NLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGL 492
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N ++ M+ K D Y +I +K G +EA + +M+ G++LD+
Sbjct: 493 CKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDL 552
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
+Y +L+ + G+++ A L EM +G D+ T L+ + GNI A
Sbjct: 553 YAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEA 606
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 210/462 (45%), Gaps = 77/462 (16%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L + G SPDVV+Y +I G +S + +L +EM++ G+ P+V +YNS++H L
Sbjct: 259 LLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALC 318
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL-CKNRYTDNALRMFRGLQKHGFVPEL 136
+ D+A V + M + P T+ M++G C R+ + A +MF+ + + G +P++
Sbjct: 319 KARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAA-KMFKEMTREGLIPDI 377
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM------------------ 178
VT+N L+ LCK R + A I + GH P+ I+Y+ ++
Sbjct: 378 VTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHS 437
Query: 179 ---------KCCFR---NRKYKLG-----LEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
CF N K G L I + M+ +G + + Y TVIAA ++GR
Sbjct: 438 MTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGR 497
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF--------- 272
L +A + + QM++ G++ + V Y++LI +C G L A L+ EM QG
Sbjct: 498 LADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFS 557
Query: 273 ---------------------------ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
D +T LIDG C G + A L+ M
Sbjct: 558 SIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSA 617
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSA 361
G + ++ Y+ +++ K G+ID + +F M K + TYS ++ L +A R +A
Sbjct: 618 GTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAA 677
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
K+ ++SG + S ++ GL + C EA + K+
Sbjct: 678 KKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKL 719
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 179/375 (47%), Gaps = 6/375 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM-GIPPDVWSYNSLMHCL 76
+L+RM E G PD +YN++I S +LD+L M + G PDV SY ++H L
Sbjct: 223 LLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGL 282
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
F G+ +A +F +M+ + P T+N +++ LCK R D A + R + + P+
Sbjct: 283 FMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDE 342
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
VTY +I G GR + A + KE+ G P+ +T+ ++M ++++ K EI +
Sbjct: 343 VTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHS 402
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
+ KG+ D Y ++ + GR + + M +G+ D +N LIN + K G
Sbjct: 403 IATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGM 462
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
++ A L+ EM QG + T+ +I LC+ G + A L M IG N Y+
Sbjct: 463 MDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHS 522
Query: 317 IVDRLGKDGKIDHAINVFESME----VKDSFT-YSSMVHNLCKAKRLPSASKLLLSCLKS 371
++ G + A + M + + T +SS++H+LC R+ +A + +
Sbjct: 523 LIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHI 582
Query: 372 GVRILKSAQKAVVDG 386
G R +++DG
Sbjct: 583 GDRPDIFTFNSLIDG 597
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 191/401 (47%), Gaps = 7/401 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG-ATRNSLLSCSLDLLDEMLEM 60
L+D+ C+ I + + G PD+++Y+ L+ G AT + + +L M +
Sbjct: 383 LMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMN-NLFHSMTDN 441
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI D +N L++ + G DEA +F +M ++P T+ ++ LC+ +A
Sbjct: 442 GIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADA 501
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG-HAPNAITYTTIMK 179
+ + G P V Y+ LI+G C G L A+ ++ E+ D G PN +++I+
Sbjct: 502 MEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIH 561
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ ++ + + G D F + ++I + +G++ +A ++ MV+ G +
Sbjct: 562 SLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEP 621
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+V+Y+TLIN Y K G+++ +L EM + + T+++++DGL +AG A+
Sbjct: 622 DVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMF 681
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE---SMEVK-DSFTYSSMVHNLCKA 355
M + G ++ Y I+ L ++ D AI +F +M +K + ++M+H L K
Sbjct: 682 HEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKV 741
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
KR A L S SG+ S ++ L G EA
Sbjct: 742 KRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEA 782
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 154/339 (45%), Gaps = 1/339 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+A+ + D I MR G+SP+VVTY ++IA R L+ +++ L +M+ +
Sbjct: 452 ILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISI 511
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDN 119
G+ P+ Y+SL+ G +A + +M+ G P F+ +++ LC N
Sbjct: 512 GLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMN 571
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +F + G P++ T+N LI G C G++ A +L + +G P+ +TY+T++
Sbjct: 572 AQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLIN 631
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
F++ + GL + M K Y V+ + GR A +M+ G +
Sbjct: 632 GYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAM 691
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
I +Y ++ C+ + A L ++ + + +I L K + A
Sbjct: 692 SISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLF 751
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
++ G N Y ++ L K+G ++ A +F SME
Sbjct: 752 ASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSME 790
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 127/271 (46%), Gaps = 7/271 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC D + +L+ M AG PDVVTY++LI G ++ + L L EML
Sbjct: 594 LIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKR 653
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P +Y+ ++ LF+ G+ A ++F +MI +T+ I+L GLC+N TD A+
Sbjct: 654 VKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAI 713
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F L E+ N +I L K R A + + SG PNA TY ++
Sbjct: 714 TLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINL 773
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + S+M++ G +I ++ G + +A YM ++ + L+
Sbjct: 774 LKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLEA 833
Query: 242 VSYNTLINLYCKEGK-------LEAAYLLLD 265
+ + LI+L+ +G+ L A Y D
Sbjct: 834 STTSLLISLFASKGRYREQIKFLPAKYQFFD 864
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 149/330 (45%), Gaps = 1/330 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I A C+ L++M G+ P+ V Y+SLI G + L + +L+ EM++ G
Sbjct: 488 VIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQG 547
Query: 62 IP-PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
IP P++ ++S++H L G+ A VF +I P TFN +++G C D A
Sbjct: 548 IPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKA 607
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P++VTY+ LI G K+GR+ + +E+ P +TY+ ++
Sbjct: 608 FGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDG 667
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
FR + ++ M G Y ++ + EA ++ ++ +
Sbjct: 668 LFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFE 727
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I NT+I+ K + E A+ L + G + T+ ++I L K G+++ A +
Sbjct: 728 IAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFS 787
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
M K G + N I+ L + G+I A
Sbjct: 788 SMEKTGCAPSSRLLNDIIRMLLQKGEIVKA 817
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 158/383 (41%), Gaps = 41/383 (10%)
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+P V +Y LM C + +PD F ++ L N L LC + TD AL
Sbjct: 161 VPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEAL 220
Query: 122 RM-FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL--------------------- 159
M + + G VP+ +YN +IK LC R + A +L
Sbjct: 221 SMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIH 280
Query: 160 ---------------KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
E+ G PN +TY +I+ + R +L M
Sbjct: 281 GLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQP 340
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D Y +I + +GR KEA ++M +G+ DIV++N+L++ CK + + A +
Sbjct: 341 DEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIF 400
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+ +G + D +++IL+ G G M G ++ +N +++ K
Sbjct: 401 HSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKR 460
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
G +D A+ +F M + + TY++++ LC+ RL A + L + G++
Sbjct: 461 GMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVY 520
Query: 381 KAVVDGLRHSGCRREAKKIQSKI 403
+++ G G +AK++ S++
Sbjct: 521 HSLIQGFCTHGDLIKAKELVSEM 543
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 96/200 (48%), Gaps = 8/200 (4%)
Query: 12 FDAGYT-----ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
F AG T + + M E+G + + TY ++ G RN+ ++ L ++ M + ++
Sbjct: 669 FRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEI 728
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
N+++H L+++ + +EA+ +F + L P +T+ +M+ L K + A MF
Sbjct: 729 AILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSS 788
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
++K G P N +I+ L + G + A + + ++ + + A T + ++ +
Sbjct: 789 MEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLEASTTSLLISLFASKGR 848
Query: 187 YKLGLEILSAMKRKGYTFDG 206
Y+ ++ L A K FDG
Sbjct: 849 YREQIKFLPA---KYQFFDG 865
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 194/430 (45%), Gaps = 75/430 (17%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I Y FD Y +L R+RE G P VV++NS++ + + +L L D M +
Sbjct: 322 MIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM-KKD 380
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P++ +YN ++ L G+ +EA ++ +M L P + NIM++ LCK + A
Sbjct: 381 AKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAH 440
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT------ 175
R+F + G P VTY LI GL K G++ A + +++ D+GH N I YT
Sbjct: 441 RIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNF 500
Query: 176 -----------------------------TIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
T M C F+ + + G I MK G+ D
Sbjct: 501 FMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDV 560
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK---------- 256
Y +I K G+ +E ++ + M G LD +YN +++ CK GK
Sbjct: 561 RSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEE 620
Query: 257 -------------------------LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
L+ AY+L +E + +G E + ++ LIDG K G
Sbjct: 621 MKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGR 680
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EVK---DSFTYSS 347
I A L LE M K G N+ +N ++D L K +ID A+ F+SM E+K +++TYS
Sbjct: 681 IDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSI 740
Query: 348 MVHNLCKAKR 357
+++ LC+ ++
Sbjct: 741 LINGLCRVQK 750
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 203/409 (49%), Gaps = 4/409 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D C+ + + I E G +P+ VTY SLI G + + + L ++ML+
Sbjct: 425 IMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDA 484
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G + Y SL+ F G+ ++ ++++++MI P N ++ + K +
Sbjct: 485 GHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKG 544
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F ++ GF+P++ +Y+ILI GL KAG+ R I + + G A +A Y ++
Sbjct: 545 RAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDG 604
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K E+L MK K Y +++ KI RL EA E+ + G++L+
Sbjct: 605 LCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELN 664
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++ Y++LI+ + K G+++ AYL+L+EM K+G + YT L+D L K I A + +
Sbjct: 665 VILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQ 724
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M ++ N Y+ +++ L + K + A ++ M+ + + TY++M+ L K
Sbjct: 725 SMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVG 784
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
+ A L +G ++ A+++G+ ++ EA ++ + R+
Sbjct: 785 NITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRL 833
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 193/447 (43%), Gaps = 40/447 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI A + + +L +M++ G V + +L+ R + +L L+DE+
Sbjct: 181 VLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGS 240
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+ YN + C + G D A + F ++ L P ++ M+ LCK A
Sbjct: 241 CLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEA 300
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F ++ VP YN +I G A R A +L+ L + G P+ +++ +I+ C
Sbjct: 301 EELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTC 360
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ RK L + MK+ + Y +I GR+ EA ++M G+ +
Sbjct: 361 LGKKRKVDEALTLFDVMKKDAKP-NISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPN 419
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++S N +++ CK +LE A+ + + ++G + T+ LIDGL K G I A E
Sbjct: 420 LLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFE 479
Query: 301 YMNKIGFDSN-----------------------------------LEAYNCIVDRLGKDG 325
M G D+N L N +D + K G
Sbjct: 480 KMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAG 539
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+++ +FE M+ + D +YS ++H L KA + S + + + G + A
Sbjct: 540 EVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYN 599
Query: 382 AVVDGLRHSGCRREAKKIQSKIRMAKI 408
AVVDGL SG +A ++ ++++ +
Sbjct: 600 AVVDGLCKSGKVDKAYEVLEEMKVKHV 626
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 163/374 (43%), Gaps = 35/374 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID + D Y + +M +AG + + Y SLI + + EM+ G
Sbjct: 461 LIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRG 520
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ N+ M C+F+ G+ ++ +F+DM P +++I+++GL K
Sbjct: 521 GRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETS 580
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ + + GF + YN ++ GLCK+G++ A +L+E+ P TY +I+
Sbjct: 581 NIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGL 640
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + K KG + Y ++I F K+GR+ EA +E+M+ G+ ++
Sbjct: 641 AKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 700
Query: 242 VSYNTL-----------------------------------INLYCKEGKLEAAYLLLDE 266
++N+L IN C+ K A++ E
Sbjct: 701 YTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQE 760
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+KQG + T+T +I GL K GNI A E G + ++N +++ + +
Sbjct: 761 MQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANR 820
Query: 327 IDHAINVFESMEVK 340
A VFE ++
Sbjct: 821 PMEAYQVFEETRLR 834
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 166/367 (45%), Gaps = 5/367 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
+ + ++ MR P Y LI +L+LL +M ++G V + +
Sbjct: 157 LEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTT 216
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
L+ L + G+ + A + ++ L P +N+ ++ K D A + F L+ HG
Sbjct: 217 LVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHG 276
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
P+ V+Y ++ LCKAGRL A + ++ P A Y T++ ++
Sbjct: 277 LRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAY 336
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
++L ++ +G + +++ K ++ EA + M D + +I +YN +I++
Sbjct: 337 KLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDA-KPNISTYNIIIDML 395
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
C G++ AY + DEME G + + I++D LCKA ++ A E ++ G + N
Sbjct: 396 CMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNS 455
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
Y ++D LGK GKID A +FE M + Y+S++ N R K+
Sbjct: 456 VTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKE 515
Query: 368 CLKSGVR 374
++ G R
Sbjct: 516 MIRRGGR 522
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 146/318 (45%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
+ G I M+ G PDV +Y+ LI G T+ + ++ M + G D +YN++
Sbjct: 542 EKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAV 601
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ L + GK D+A V ++M + P AT+ +++GL K D A +F + G
Sbjct: 602 VDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGI 661
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
++ Y+ LI G K GR+ A IL+E+ G PN T+ ++M + + L
Sbjct: 662 ELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALI 721
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+MK + + + Y +I ++ + +A + ++M G+ ++V+Y T+I+
Sbjct: 722 CFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLA 781
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K G + AY L + + G D + LI+G+ A A E G N++
Sbjct: 782 KVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVK 841
Query: 313 AYNCIVDRLGKDGKIDHA 330
++D L K ++ A
Sbjct: 842 TCISLLDALNKTECLEQA 859
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 125/287 (43%), Gaps = 35/287 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D C+ D Y +L M+ + P V TY S++ G + L + L +E G
Sbjct: 601 VVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKG 660
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I +V Y+SL+ ++G+ DEA + ++M+ LTP T+N +++ L K D AL
Sbjct: 661 IELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEAL 720
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F+ +++ P TY+ILI GLC+ + A +E+ G PN +TYTT+
Sbjct: 721 ICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTM---- 776
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
I+ K+G + +A E+ T+G D
Sbjct: 777 -------------------------------ISGLAKVGNITDAYSLFERFKTNGGIPDS 805
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
S+N LI + AY + +E +G + T L+D L K
Sbjct: 806 ASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNK 852
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 158/341 (46%), Gaps = 15/341 (4%)
Query: 30 DVVTYNSLIAGATRNSLLSCSLDLL-DEMLEMGIPPDVWSYNSLMHCL-FQLGKPDEANR 87
DVV Y + + +N L+ LL +PPD +YN+++ L L ++
Sbjct: 76 DVVVY---VLRSLKNPSLAAPFFLLASASSSQPLPPD--AYNAVLPFLSHDLAALEKVLE 130
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
+ G P A ++ L ++R ++A R+ ++ F P Y +LI L
Sbjct: 131 EMSHLGYGLPNPACAA---LVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALA 187
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
+A + A +L+++ D G+ + +TT+++ R + + L ++ +K D
Sbjct: 188 EARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIV 247
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y I F K G + A + ++ G++ D VSY +++ + CK G+L A L +M
Sbjct: 248 LYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQM 307
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
E + Y + +I G A A LE + + G ++ ++N I+ LGK K+
Sbjct: 308 EAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKV 367
Query: 328 DHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKL 364
D A+ +F+ M+ KD+ TY+ ++ LC A R+ A K+
Sbjct: 368 DEALTLFDVMK-KDAKPNISTYNIIIDMLCMAGRVNEAYKI 407
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 195/399 (48%), Gaps = 4/399 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C +++RM E G P ++T N+L+ G N +S ++ L+D M+E G
Sbjct: 148 LINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETG 207
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y ++ + + G+ A + + M + ++I+++GLCK+ DNA
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ GF +++ Y LI+G C AGR +L+++ P+ + ++ ++ C
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + E+ M ++G + D Y ++I F K +L +A ++ MV+ G +I
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++N LIN YCK ++ L +M +G D T+ LI G C+ G ++ A+ +
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M ++ +Y ++D L +G+ + A+ +FE +E D Y+ ++H +C A +
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 507
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ A L S GV+ ++ GL G EA
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 198/403 (49%), Gaps = 4/403 (0%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
+D + +M GI+ ++ T + +I R LS + + +++++G PD +++
Sbjct: 87 QYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFS 146
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+L++ L G+ EA + M+ P T N ++NGLC N +A+ + + +
Sbjct: 147 TLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVET 206
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
GF P VTY ++K +CK+G+ A +L+++ + +A+ Y+ I+ ++
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA 266
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+ + M+ KG+ D Y T+I F GR + + M+ + D+V+++ LI+
Sbjct: 267 FNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC 326
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+ KEGKL A L EM ++G D T+T LIDG CK + A L+ M G N
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLL 366
+ +N +++ K ID + +F M V D+ TY++++ C+ +L A +L
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+ VR + K ++DGL +G +A +I KI +K+
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 168/352 (47%), Gaps = 9/352 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C +D G +L M + I+PDVV +++LI + L + +L EM++ G
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD +Y SL+ + + D+AN + M+ P TFNI++NG CK D+ L
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + G V + VTYN LI+G C+ G+L A+ + +E+ P+ ++Y ++
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N + + LEI +++ D Y +I ++ +A D + GV+ D+
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDV 527
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN +I CK+G L A LL +ME+ G + T+ ILI G+ + +E
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLC 353
+ + GF + + L + K H D FT+++++ C
Sbjct: 588 IKRCGFSVDASTLRFALSTLARMLKAGHE---------PDVFTFTTLLRPFC 630
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 24/312 (7%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ D G + +M G+ D VTYN+LI G L + +L EM+
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+ SY L+ L G+P++A +F+ + + +NI+++G+C D+A
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM-- 178
+F L G P++ TYNI+I GLCK G L A + +++ + GH+PN TY ++
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571
Query: 179 ------------------KCCFR--NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV- 217
+C F + L L+ M + G+ D F + T++ F
Sbjct: 572 HLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCL 631
Query: 218 -KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
+ + +A + M G + ++V+YNT+I + +LD+M ++G + +
Sbjct: 632 EENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNA 691
Query: 277 YTHTILIDGLCK 288
T + I GLCK
Sbjct: 692 VTKSTFISGLCK 703
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 147/296 (49%), Gaps = 4/296 (1%)
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
D+A+ +F+ + + P L+ ++ L + + + + K++ G A N T + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ CC R RK L + + + GY D + T+I GR+ EA + +++MV G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+ +++ N L+N C GK+ A LL+D M + GF+ ++ T+ ++ +CK+G A
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 353
L M + + Y+ I+D L KDG +D+A N+F ME+K D Y++++ C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
A R +KLL +K + A A++D G REA+++ ++ IS
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 196/412 (47%), Gaps = 6/412 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M+I + +A ++ M+ G+ PD+VTYNSLI G + +L+ ++ + +EM +
Sbjct: 256 MVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDA 315
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +YNSL++C + + +A M L P T++ +++ CK A
Sbjct: 316 GCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEA 375
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ F + + G P TY LI CK G L A + E+ +G N +TYT ++
Sbjct: 376 NKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDG 435
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + E+ A+ + G+T + Y ++ ++K +++A D +E+M ++ D
Sbjct: 436 LCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPD 495
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++ Y T I C++ ++E + ++ EM G + Y +T LID K G A L+
Sbjct: 496 LLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQ 555
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M +G + Y ++D L K G + A+ F+ M + Y++++ LCK
Sbjct: 556 EMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKND 615
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
L A L L G+ K +++DG G EA +++ RM +I
Sbjct: 616 CLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRN--RMVEI 665
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 195/402 (48%), Gaps = 4/402 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID Y + ++ M++AG PDV+TYNSLI + + + + L M + G
Sbjct: 292 LIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRG 351
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V +Y++L+ + G EAN+ F DMI L P T+ +++ CK + A
Sbjct: 352 LQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAF 411
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ +Q+ G +VTY L+ GLC+ GR+R A + L +G N YT++
Sbjct: 412 KLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGY 471
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + ++IL M +K D Y T I + ++++ + +M+ G+ +
Sbjct: 472 IKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANS 531
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
Y TLI+ Y K GK A LL EM+ G + T+ +LIDGLCK G ++ A + ++
Sbjct: 532 YIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDH 591
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M + G N+ Y ++D L K+ ++ A N+F M K D Y+S++ K
Sbjct: 592 MTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGN 651
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
A L ++ G+ + A +++ G G + AK +
Sbjct: 652 PGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSL 693
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 181/387 (46%), Gaps = 4/387 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
+ M AG+SP V TYN +I R L + L +EM G+ PD+ +YNSL+
Sbjct: 237 SFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGY 296
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
++G A VF++M P T+N ++N CK A G+++ G P +
Sbjct: 297 GKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNV 356
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
VTY+ LI CKAG L A ++ G PN TYT+++ + ++ S
Sbjct: 357 VTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESE 416
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M++ G + Y ++ + GR++EA + ++ G L+ Y +L + Y K
Sbjct: 417 MQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKM 476
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+E A +L+EM K+ + D + I GLC+ I+ + + M G +N Y
Sbjct: 477 MEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTT 536
Query: 317 IVDRLGKDGKIDHAINVFESME---VKDS-FTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++D K GK A+N+ + M+ +K + TY ++ LCK + A + ++G
Sbjct: 537 LIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNG 596
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKI 399
++ A++DGL + C EAK +
Sbjct: 597 LQPNIMIYTALIDGLCKNDCLEEAKNL 623
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 167/345 (48%), Gaps = 4/345 (1%)
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
P V S N L+H L + K A F+DM+ L+P T+N+++ L + + A +
Sbjct: 214 PKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSL 273
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
F ++ G P++VTYN LI G K G L A + +E+ D+G P+ ITY +++ C +
Sbjct: 274 FEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCK 333
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
+ E L MK++G + Y T+I AF K G L EA + M+ G+Q + +
Sbjct: 334 FERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFT 393
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
Y +LI+ CK G L A+ L EM++ G + T+T L+DGLC+ G ++ A +
Sbjct: 394 YTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALL 453
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLP 359
K G+ N + Y + K ++ A+++ E M K D Y + + LC+ +
Sbjct: 454 KAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIE 513
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ ++ + G+ ++D G EA + +++
Sbjct: 514 DSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQ 558
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 182/382 (47%), Gaps = 4/382 (1%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
+M + + P V + N L+ +++S +L +M+ G+ P V++YN ++ CL + G
Sbjct: 206 KMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREG 265
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
+ A +F++M L P T+N +++G K A+ +F ++ G P+++TYN
Sbjct: 266 DLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYN 325
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
LI CK R+ A L + G PN +TY+T++ + + M R
Sbjct: 326 SLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRV 385
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G + F Y ++I A KIG L EA +M GV L+IV+Y L++ C++G++ A
Sbjct: 386 GLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREA 445
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
L + K G+ ++ +T L G KA ++ A LE MNK +L Y +
Sbjct: 446 EELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWG 505
Query: 321 LGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
L + +I+ ++ V M +S+ Y++++ K + A LL G++I
Sbjct: 506 LCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKIT 565
Query: 377 KSAQKAVVDGLRHSGCRREAKK 398
++DGL G ++A +
Sbjct: 566 VVTYGVLIDGLCKIGLVQQAVR 587
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 175/371 (47%), Gaps = 35/371 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C+F + L+ M++ G+ P+VVTY++LI + +L + +M+ +G
Sbjct: 327 LINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVG 386
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ ++Y SL+ ++G +EA ++ +M + T+ +L+GLC++ A
Sbjct: 387 LQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAE 446
Query: 122 RMFRGLQK--------------HGFV---------------------PELVTYNILIKGL 146
+F L K HG++ P+L+ Y I GL
Sbjct: 447 ELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGL 506
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C+ + + +++E+ D G N+ YTT++ F+ K + +L M+ G
Sbjct: 507 CRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITV 566
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I KIG +++A Y + M +G+Q +I+ Y LI+ CK LE A L +E
Sbjct: 567 VTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNE 626
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M +G DK +T LIDG K GN A M +IG + +L AY ++ + G+
Sbjct: 627 MLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQ 686
Query: 327 IDHAINVFESM 337
+ A ++ + M
Sbjct: 687 VQLAKSLLDEM 697
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 155/307 (50%), Gaps = 6/307 (1%)
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
P +++L + L LG +EA + F M + P + N +L+ L K+ AL
Sbjct: 179 PGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSF 238
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
F+ + G P + TYN++I L + G L AR + +E+ G P+ +TY +++ +
Sbjct: 239 FKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGK 298
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
+ + MK G D Y ++I F K R+ +A +Y+ M G+Q ++V+
Sbjct: 299 VGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVT 358
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
Y+TLI+ +CK G L A +M + G + +++T+T LID CK G++ A M
Sbjct: 359 YSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQ 418
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKAKRL 358
+ G + N+ Y ++D L +DG++ A +F ++ +K +T Y+S+ H KAK +
Sbjct: 419 QAGVNLNIVTYTALLDGLCEDGRMREAEELFGAL-LKAGWTLNQQIYTSLFHGYIKAKMM 477
Query: 359 PSASKLL 365
A +L
Sbjct: 478 EKAMDIL 484
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 135/278 (48%), Gaps = 4/278 (1%)
Query: 99 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 158
P F+ + N L + A + F + K +P++ + N L+ L K+ + A
Sbjct: 179 PGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSF 238
Query: 159 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 218
K++ +G +P+ TY ++ C R + + MK KG D Y ++I + K
Sbjct: 239 FKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGK 298
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
+G L A E+M G + D+++YN+LIN +CK ++ A+ L M+++G + + T
Sbjct: 299 VGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVT 358
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
++ LID CKAG + A M ++G N Y ++D K G ++ A + M+
Sbjct: 359 YSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQ 418
Query: 339 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
+ TY++++ LC+ R+ A +L + LK+G
Sbjct: 419 QAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAG 456
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 135/271 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L Y + + IL M + + PD++ Y + I G R + + S+ ++ EM++ G
Sbjct: 467 LFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCG 526
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ + + Y +L+ F++GK EA + Q+M + T+ ++++GLCK A+
Sbjct: 527 LTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAV 586
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R F + ++G P ++ Y LI GLCK L A+ + E+ D G +P+ + YT+++
Sbjct: 587 RYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGN 646
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ L + + M G D Y ++I F + G+++ A +++M+ G+ D
Sbjct: 647 MKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQ 706
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
V L+ Y + G + A L D+M ++G
Sbjct: 707 VLCICLLRKYYELGDINEALALHDDMARRGL 737
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 174/391 (44%), Gaps = 60/391 (15%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLI---------------------AG 40
LIDA C+ + + + + M++AG++ ++VTY +L+ AG
Sbjct: 397 LIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAG 456
Query: 41 ATRNSLLSCSL--------------DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
T N + SL D+L+EM + + PD+ Y + + L + + +++
Sbjct: 457 WTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSM 516
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
V ++M+ LT + + +++ K T A+ + + +Q G +VTY +LI GL
Sbjct: 517 AVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGL 576
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK G ++ A + +G PN + YT ++ +N + + + M KG + D
Sbjct: 577 CKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDK 636
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y ++I +K G EA +MV G++LD+ +Y +LI + + G+++ A LLDE
Sbjct: 637 LVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDE 696
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M ++G D+ L+ + G+I A LH D + + G
Sbjct: 697 MLRKGIIPDQVLCICLLRKYYELGDINEALALH--------------------DDMARRG 736
Query: 326 KIDHAINVFESMEVKDSFTYSSMVHNLCKAK 356
I I++ V T + +H LC ++
Sbjct: 737 LISGTIDI----TVPSCLTAVTKLHKLCASQ 763
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 95/189 (50%), Gaps = 4/189 (2%)
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A + + MV G+ + +YN +I +EG LEAA L +EM+ +G D T+ LID
Sbjct: 235 ALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLID 294
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 340
G K G + GA E M G + ++ YN +++ K +I A M+ +
Sbjct: 295 GYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQP 354
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 400
+ TYS+++ CKA L A+K + ++ G++ + +++D G EA K++
Sbjct: 355 NVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLE 414
Query: 401 SKIRMAKIS 409
S+++ A ++
Sbjct: 415 SEMQQAGVN 423
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 174/336 (51%), Gaps = 4/336 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M+ G +PDVV+Y+++I G L L L+ EM G+ P++++YNS++ L + GK
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
D+A RV ++MI + P T + +++G CK A ++F ++K VP+ + Y
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
+I GLC+ G++ A + ++ G P+ +TYTT++ ++ + + + + M + G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
T + Y + K+G++ A + + +M G+QL+I +YN+L+N CK G + A
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
L++EME G D T T L+D CK G + A L M G + +N +++
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 353
G ++ + M K ++ TY+S++ C
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYC 336
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 169/351 (48%), Gaps = 1/351 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ + A Y + + M + I PD + Y ++I G R + + + ++M G
Sbjct: 86 LIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRG 145
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y +L+ + G+ ++A + M+ LTP T+ + +GLCK D A
Sbjct: 146 VEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTAN 205
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G + TYN L+ GLCK+G +R A +++E+ +G P+ IT+TT+M
Sbjct: 206 ELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAY 265
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + E+L M +G + ++ F G L++ + M+ G+ +
Sbjct: 266 CKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNT 325
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN+L+ YC + + M +G D T+ ILI G CKA N+K A +
Sbjct: 326 TTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKE 385
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
M + GF+ +YN I+ K KI A +FE M ++ + ++NL
Sbjct: 386 MAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMR-REGMAADAEIYNL 435
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 182/402 (45%), Gaps = 39/402 (9%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
C+ D +L M GI PD V Y +LI G + + + L DEM + I PD
Sbjct: 56 CKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDF 115
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
+Y +++ L + GK EA++VF M + P T+ +++G CK+ + A +
Sbjct: 116 IAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQ 175
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
+ + G P +VTY L GLCK G++ TA +L E+ G N TY +++
Sbjct: 176 MVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVN------- 228
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
G C K G +++A ME+M G+ D +++ T
Sbjct: 229 ---------------------GLC-------KSGNIRQAVKLMEEMEVAGMYPDTITFTT 260
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
L++ YCK G++ A+ LL EM +G + T +L++G C +G ++ L +M + G
Sbjct: 261 LMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKG 320
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSAS 362
N YN ++ + + +++ M + DS TY+ ++ CKA+ + A
Sbjct: 321 IMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAW 380
Query: 363 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
L + G + S+ +++ G EA+++ ++R
Sbjct: 381 FLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMR 422
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 159/316 (50%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ N+M G+ PD VTY +LI G ++ + + L ++M++ G+ P+V +Y +L L
Sbjct: 137 VFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLC 196
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+LG+ D AN + +M L T+N ++NGLCK+ A+++ ++ G P+ +
Sbjct: 197 KLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTI 256
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T+ L+ CK G + A +L+E+ D G P IT+ +M + + G +L+ M
Sbjct: 257 TFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWM 316
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
KG + Y +++ + ++ T+ + M GV D +YN LI +CK +
Sbjct: 317 LEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNM 376
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A+ L EM ++GF ++ +I G K I AR E M + G ++ E YN
Sbjct: 377 KEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLF 436
Query: 318 VDRLGKDGKIDHAINV 333
VD +G ++ A+ +
Sbjct: 437 VDISYGEGNMETALEL 452
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 163/324 (50%), Gaps = 12/324 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ + +++ N+M ++G++P+VVTY +L G + + + +LL EM G
Sbjct: 156 LIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKG 215
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ ++ +YNSL++ L + G +A ++ ++M + P T TF +++ CK A
Sbjct: 216 LQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAH 275
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-C 180
+ R + G P ++T+N+L+ G C +G L +L + + G PN TY ++MK
Sbjct: 276 ELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQY 335
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C RN + EI M +G D Y +I K +KEA ++M G L
Sbjct: 336 CIRN-NMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLT 394
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
SYN++I + K+ K+ A L +EM ++G D + + +D GN++ A L L
Sbjct: 395 ASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETA-LEL- 452
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKD 324
D +E NC ++R+ K+
Sbjct: 453 ------CDEAIE--NCFLNRIKKE 468
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 129/245 (52%), Gaps = 4/245 (1%)
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
G AP+ ++Y+T++ + + L+++ M+ KG + + Y ++I K G++ +A
Sbjct: 5 GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ +M+ G+ D V Y TLI+ +CK G ++AAY L DEMEKQ D +T +I G
Sbjct: 65 ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKD 341
LC+ G + A M G + + Y ++D K G+++ A ++ M +
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
TY+++ LCK ++ +A++LL G+++ ++V+GL SG R+A K+
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLME 244
Query: 402 KIRMA 406
++ +A
Sbjct: 245 EMEVA 249
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 4/157 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ +C + G +L M E GI P+ TYNSL+ + + C+ ++ M
Sbjct: 295 VLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCAR 354
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G+ PD +YN L+ HC + K EA + ++M +++N ++ G K +
Sbjct: 355 GVMPDSNTYNILIKGHCKARNMK--EAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKIS 412
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 155
A +F +++ G + YN+ + G + TA
Sbjct: 413 EARELFEEMRREGMAADAEIYNLFVDISYGEGNMETA 449
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 178/369 (48%), Gaps = 4/369 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+DA C+ + +L+ MR G PD+VTYN LI + +L++L +
Sbjct: 291 ILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSH 350
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD +Y ++ L + E + +M + P TFN ++ LC+ D A
Sbjct: 351 GCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRA 410
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + +HG V ++VTY+ ++ GLC GR+ A +L L G P+ I YTT++K
Sbjct: 411 IEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKG 470
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+++ E+++ M D + TV+A+ + G + A +EQM +G D
Sbjct: 471 LCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPD 530
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+YN +I+ C E ++ A LL +++ G + D T L+ GLC + A +
Sbjct: 531 IVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMA 590
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + + +N ++ L + G + AI + M V +S TYS +V L KA
Sbjct: 591 NMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAG 650
Query: 357 RLPSASKLL 365
+ +A +LL
Sbjct: 651 KAQAALELL 659
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 175/376 (46%), Gaps = 6/376 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D C D +L+R++ G PD + Y +++ G + +L+ EML
Sbjct: 432 ILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSD 491
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PPD ++N+++ L Q G D A RV + M +P T+N +++GLC D+A+
Sbjct: 492 CPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAM 551
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ LQ G P++VT+N L+KGLC R A ++ + S P+ +T+ T++
Sbjct: 552 ELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSL 611
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +E L M G + Y V+ A +K G+ + A + + M T+G D+
Sbjct: 612 CQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM-TNGTP-DL 669
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YNT+I+ K GK+E A LL M G D T+ L G+C+ A L
Sbjct: 670 ITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRR 729
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G + YN ++ +D + D AI+ F M + D TY ++ L
Sbjct: 730 VQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGL 789
Query: 358 LPSASKLLLSCLKSGV 373
L A +LL S GV
Sbjct: 790 LDEAKRLLASLCSLGV 805
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 169/344 (49%), Gaps = 7/344 (2%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G S VVTYN+++ G R + + L++ M PPD +++N L+ L G+ +A
Sbjct: 214 GPSATVVTYNTMVNGYCRAGRIEDARRLIN---GMPFPPDTFTFNPLIRALCVRGRIPDA 270
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
VF DM+ +P T++I+L+ CK A+ + ++ G P++VTYN+LI
Sbjct: 271 LAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINA 330
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
+C G + A IL L G P+A+TYT ++K + ++K E+L+ M D
Sbjct: 331 MCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPD 390
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ T++ + + G + A + ++ M G DIV+Y+++++ C G+++ A LL
Sbjct: 391 EVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLS 450
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
++ G + D +T ++ GLC + A + M + +N +V L + G
Sbjct: 451 RLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKG 510
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
+D AI V E M D TY+ ++ LC + A +LL
Sbjct: 511 LVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELL 554
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 176/374 (47%), Gaps = 7/374 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ YC+ + ++N M PD T+N LI + +L + D+ML G
Sbjct: 225 MVNGYCRAGRIEDARRLINGM---PFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRG 281
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y+ L+ + +A + +M P T+N+++N +C D AL
Sbjct: 282 CSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEAL 341
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L HG P+ VTY ++K LC + R + +L E+ + AP+ +T+ TI+
Sbjct: 342 NILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSL 401
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +E++ M G D Y +++ +GR+ +A + + ++ + G + D
Sbjct: 402 CQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDT 461
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y T++ C + E A L+ EM D+ T ++ LC+ G + A +E
Sbjct: 462 IAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQ 521
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M++ G ++ YNCI+D L + ID A+ + ++ D T+++++ LC R
Sbjct: 522 MSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDR 581
Query: 358 LPSASKLLLSCLKS 371
A +L+ + ++S
Sbjct: 582 WEDAEQLMANMMRS 595
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 147/326 (45%), Gaps = 22/326 (6%)
Query: 73 MHCLFQLGKPDEANRVFQDMI------CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
+ L Q G+ DEA +F M C + PC NI++ LC + +A R+F
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPC----NILIKRLCSDGRVSDAERVFAA 212
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNR 185
L V VTYN ++ G C+AGR+ AR ++ + P+ T+ +++ C R R
Sbjct: 213 LGPSATV---VTYNTMVNGYCRAGRIEDARRLINGM---PFPPDTFTFNPLIRALCVRGR 266
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
L + M +G + Y ++ A K ++A +++M G + DIV+YN
Sbjct: 267 -IPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYN 325
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
LIN C EG ++ A +L + G + D T+T ++ LC + K L M
Sbjct: 326 VLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSN 385
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 361
+ +N IV L + G +D AI V + M V D TYSS++ LC R+ A
Sbjct: 386 NCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDA 445
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGL 387
+LL G + A V+ GL
Sbjct: 446 VELLSRLKSYGCKPDTIAYTTVLKGL 471
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 87/162 (53%), Gaps = 2/162 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++DA + A +L+ M +PD++TYN++I+ T+ + +LDLL M+
Sbjct: 641 IVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRVMVSN 698
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD +Y SL + + + D A R+ + + L+P T +N +L G C++R TD A
Sbjct: 699 GLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLA 758
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
+ F + G +P+ TY IL++ L G L A+ +L L
Sbjct: 759 IDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASL 800
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 194/412 (47%), Gaps = 41/412 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I++ C D ++ L ++ + G PD T+ +LI G + +L L D+M+
Sbjct: 110 IVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE 169
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V +Y +L++ L ++G A R+ + M G+ P F+ +++ LCK+R A
Sbjct: 170 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEA 229
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS--------------- 165
+F + G P +VTYN LI GLCK + ++ E+ DS
Sbjct: 230 FNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDA 289
Query: 166 --------------------GHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMKRKGYTF 204
G PN +TY +M C RN + + +++ M K
Sbjct: 290 LCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRN-EVDVAVKVFDTMVHKDCVA 348
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ Y T+I + KI + +A E+M + + V+YNTLI+ C G+L+ A L
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
EM +G D T+ L D LCK ++ A L+ + +D +++ Y I+D + +
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 468
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
G+++ A ++F ++ K + +TY+ M+H LCK L ASKL K+G
Sbjct: 469 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 520
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 170/369 (46%), Gaps = 4/369 (1%)
Query: 8 QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 67
F + D + NRM P V +N L+ + S L L +M GIPPDV+
Sbjct: 47 HFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVY 106
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+ +++ L L + D A ++ P TF ++ GLC AL +F +
Sbjct: 107 TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 166
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
GF P +VTY LI GLCK G A +L+ + PN + ++T++ ++R+
Sbjct: 167 IGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQV 226
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
I S M KG + + Y ++I K+ K T M +MV + D+ + NT+
Sbjct: 227 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 286
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
++ CKEG + A+ ++D M +G E + T+ L+DG C + A + M
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 346
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASK 363
+N+ +YN +++ K +D A+ +FE M ++ TY++++H LC RL A
Sbjct: 347 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 406
Query: 364 LLLSCLKSG 372
L + G
Sbjct: 407 LFHEMVARG 415
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 167/332 (50%), Gaps = 5/332 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + T++N M ++ I PDV T N+++ + +++ + D++D M+ G
Sbjct: 251 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG 310
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ P+V +YN+LM HCL + D A +VF M+ D ++N ++NG CK + D
Sbjct: 311 VEPNVVTYNALMDGHCL--RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDK 368
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+ +F + + P VTYN LI GLC GRL+ A + E+ G P+ +TY T+
Sbjct: 369 AMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSD 428
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+NR + +L A++ + D Y T++ + G L++A D + + G+Q
Sbjct: 429 YLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQP 488
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
++ +YN +I+ CK+G L A L EM K G + T+ ++ G + L
Sbjct: 489 NVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELL 548
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
E M GF ++ +V L DG +D ++
Sbjct: 549 EEMLARGFSVDVSTTTLLVGMLSDDG-LDQSV 579
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 184/406 (45%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ + A +L M + P+VV +++LI ++ ++ + ++ EM+ G
Sbjct: 181 LINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKG 240
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P++ +YNSL+H L +L + + +M+ + P T N +++ LCK A
Sbjct: 241 ISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAH 300
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P +VTYN L+ G C + A + + N I+Y T++
Sbjct: 301 DVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGY 360
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + + M R+ T + Y T+I +GRL++A +MV G D+
Sbjct: 361 CKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDL 420
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y TL + CK L+ A LL +E ++ D +T ++DG+C+AG ++ AR
Sbjct: 421 VTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSN 480
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
++ G N+ YN ++ L K G + A +F M + TY+ + +
Sbjct: 481 LSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNE 540
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+LL L G + S +V L G + K+I KI
Sbjct: 541 ALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKI 586
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 161/378 (42%), Gaps = 41/378 (10%)
Query: 60 MGIPPDVWS--YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
+ +PP S +N+ DEA F M+ P T FN +L + K ++
Sbjct: 27 LSLPPPFLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHH 86
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
L + R + G P++ T I+I LC R+ A L ++ GH P+A T+TT+
Sbjct: 87 STLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTL 146
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG----------------- 220
++ K L + M +G+ + Y T+I K+G
Sbjct: 147 IRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNC 206
Query: 221 ------------------RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
++ EA + +M+T G+ +IV+YN+LI+ CK + +
Sbjct: 207 QPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTT 266
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
L++EM D +T ++D LCK G + A ++ M G + N+ YN ++D
Sbjct: 267 LMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHC 326
Query: 323 KDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
++D A+ VF++M KD +Y+++++ CK + + A L + +
Sbjct: 327 LRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTV 386
Query: 379 AQKAVVDGLRHSGCRREA 396
++ GL H G ++A
Sbjct: 387 TYNTLIHGLCHVGRLQDA 404
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 176/338 (52%), Gaps = 5/338 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ + + +L+ +R +S ++VTYN+LI G R L +L L ++M+ G
Sbjct: 383 LIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRG 442
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV +Y L++ +LG A F +M+ L P + + G K T A
Sbjct: 443 IHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAF 502
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + GF P+++TYN+ + GLCK G L A +L+++ GH P+ +TYT+ M
Sbjct: 503 KLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAH 562
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N + G EI M +G T Y +I A GRL A Y +M GV ++
Sbjct: 563 MENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNV 622
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLE 300
++YN LIN +CK K++ A EM+++G +KYT+TILI+ C G + A RL+ +
Sbjct: 623 ITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQ 682
Query: 301 YMNK-IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
+ K I DS + ++ +L KD K+ A+ ES+
Sbjct: 683 MLGKRIRPDSC--THGALLKKLDKDYKV-QAVQFIESL 717
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 188/402 (46%), Gaps = 9/402 (2%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
++ M +AG+ TYN LI G + LL +L L +EM+ G+ P V S+N++M+
Sbjct: 294 LIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFC 353
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ GK +A + DM+ +L P ++N ++ G C+ A + L+ +V
Sbjct: 354 KEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIV 413
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN LI GLC+ G L TA + +++ + G P+ +TYT ++ + + E M
Sbjct: 414 TYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEM 473
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
G D F Y I +K+G +A E+M+T G D+++YN +N CK G L
Sbjct: 474 LHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNL 533
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
E A LL +M + G D T+T + + G+++ R M G + Y +
Sbjct: 534 EEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVL 593
Query: 318 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ +G++D A+ F M+ V + TY+ +++ CK +++ A K + + G+
Sbjct: 594 IHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGI 653
Query: 374 RILKSAQKAVVD-----GLRHSGCRREAKKIQSKIRMAKISH 410
K +++ G R A+ + +IR +H
Sbjct: 654 FPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTH 695
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 179/386 (46%), Gaps = 4/386 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ +M PDV N ++ +LL +L++ M E GI P V +YN+++H
Sbjct: 189 VFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFC 248
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G+ A + M P TFN+++NGL K A + + + K G
Sbjct: 249 KGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPY 308
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN LI G CK G L A + +E+ G +P ++ TIM + K + LS M
Sbjct: 309 TYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDM 368
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+K D Y T+I F ++G + EA ++++ + +IV+YNTLI+ C+ G L
Sbjct: 369 LKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDL 428
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
E A L ++M +G D T+T+L++G CK GN+ A+ + M +G + AY
Sbjct: 429 ETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTAR 488
Query: 318 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ K G A + E M K D TY+ V+ LCK L A +LL ++ G
Sbjct: 489 IVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGH 548
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKI 399
+ + +G RE ++I
Sbjct: 549 VPDHVTYTSFMHAHMENGHLREGREI 574
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 169/356 (47%), Gaps = 6/356 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M E GI P V TYN+++ + + +LDL+ +M E G P ++N L++ L + G+
Sbjct: 228 MGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGE 287
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
+A + Q+M L T+N ++ G CK AL ++ + G P + ++N
Sbjct: 288 LQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNT 347
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
++ G CK G++ AR L ++ P+ I+Y T++ R +L ++ +
Sbjct: 348 IMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRN 407
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+F+ Y T+I ++G L+ A E M+ G+ D+V+Y L+N CK G + A
Sbjct: 408 LSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAK 467
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDR 320
DEM G D++ +T I G K G+ K +L E + K GF ++ YN V+
Sbjct: 468 EFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTK-GFPPDVITYNVFVNG 526
Query: 321 LGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
L K G ++ A + + M V D TY+S +H + L ++ L G
Sbjct: 527 LCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRG 582
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 163/357 (45%), Gaps = 39/357 (10%)
Query: 51 LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 110
L + ++M+ PDV + N ++ L +A V++ M + P T+N ML+
Sbjct: 187 LLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHS 246
Query: 111 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
CK AL + +Q+ G P VT+N+LI GL K G L+ A+ +++E+ +G +
Sbjct: 247 FCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVS 306
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
TY ++ C GYC K G L EA E
Sbjct: 307 PYTYNPLI--C--------------------------GYC-------KKGLLVEALALWE 331
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+MVT GV + S+NT++ +CKEGK+ A L +M K+ D ++ LI G C+ G
Sbjct: 332 EMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLG 391
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 346
NI A + L+ + N+ YN ++D L + G ++ A+ + E M + D TY+
Sbjct: 392 NIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYT 451
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+V+ CK + A + L G+ + A A + G G +A K+Q ++
Sbjct: 452 VLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEM 508
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 118/263 (44%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ C+ + + M G++PD Y + I G + + + L +EML
Sbjct: 452 VLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTK 511
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PPDV +YN ++ L +LG +EA + Q MI P T+ ++ +N +
Sbjct: 512 GFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREG 571
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G P +VTY +LI GRL A E+ + G PN ITY ++
Sbjct: 572 REIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLING 631
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ RK + M+ KG + + Y +I +G+ +EA QM+ ++ D
Sbjct: 632 FCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPD 691
Query: 241 IVSYNTLINLYCKEGKLEAAYLL 263
++ L+ K+ K++A +
Sbjct: 692 SCTHGALLKKLDKDYKVQAVQFI 714
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
G I M G +P VVTY LI N L ++ EM E G+ P+V +YN L++
Sbjct: 571 GREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLIN 630
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
++ K D+A + F +M + P T+ I++N C ALR++ + P
Sbjct: 631 GFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRP 690
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+ T+ L+K L K +++ ++I + D +A T
Sbjct: 691 DSCTHGALLKKLDKDYKVQAVQFIESLILDGDRTIDANT 729
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 179/352 (50%), Gaps = 4/352 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C F I M++ G+ PD TYNS I+G + L + L+ +MLE G
Sbjct: 257 IIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGG 316
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +YN+L+ G D+A +MI + T+N+ ++ L +A
Sbjct: 317 LVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDAD 376
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + +++ G +P+ VT+NILI G C+ G + A +L E+ G P +TYT+++
Sbjct: 377 NMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVL 436
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + K + S ++++G D + +I G + A +++M V D
Sbjct: 437 GKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDE 496
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YNTL+ YC+EGK+E A LLDEM+++G + D ++ LI G K G++K A +
Sbjct: 497 ITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDE 556
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 349
M GFD + YN ++ L K+ + +HA + + M K D TY S++
Sbjct: 557 MMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSII 608
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 186/392 (47%), Gaps = 4/392 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ + M G+ P+VVTYN++I G + + M +
Sbjct: 221 IMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDK 280
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD ++YNS + L + G+ +EA+ + M+ G L P T+N +++G C D A
Sbjct: 281 GLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKA 340
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ G + LVTYN+ I L GR+ A ++KE+ + G P+A+T+ ++
Sbjct: 341 YAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILING 400
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R K +L M KG Y ++I K R+KEA ++ +G+ D
Sbjct: 401 YCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPD 460
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I+ +N LI+ +C G ++ A+ LL EM+ D+ T+ L+ G C+ G ++ AR L+
Sbjct: 461 IIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLD 520
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
M + G + +YN ++ K G + A V + M TY++++ LCK +
Sbjct: 521 EMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQ 580
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
A +LL + G+ S ++++ +
Sbjct: 581 EGEHAEELLKEMVSKGITPDDSTYLSIIEAME 612
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 191/407 (46%), Gaps = 4/407 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ AYC+ + ++E G P++ T N +++ + + + L EM M
Sbjct: 151 LLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRM 210
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I ++++N +++ L + GK +A M + P T+N +++G C A
Sbjct: 211 NIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRA 270
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ ++ G P+ TYN I GLCK GRL A ++ ++ + G PNA+TY ++
Sbjct: 271 RVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDG 330
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
M KG Y I A GR+ +A + +++M G+ D
Sbjct: 331 YCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPD 390
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V++N LIN YC+ G + A+ LLDEM +G + T+T LI L K +K A
Sbjct: 391 AVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFS 450
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ + G ++ +N ++D +G ID A + + M+ + D TY++++ C+
Sbjct: 451 KIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREG 510
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++ A +LL + G++ + ++ G G ++A +++ ++
Sbjct: 511 KVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEM 557
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 145/293 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC D Y + M GI +VTYN I + + +++ EM E G
Sbjct: 327 LIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKG 386
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD ++N L++ + G A + +M+ + P T+ ++ L K A
Sbjct: 387 MMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEAD 446
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +Q+ G +P+++ +N LI G C G + A +LKE+ + P+ ITY T+M+
Sbjct: 447 ALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGY 506
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R K + ++L MKR+G D Y T+I+ + K G +K+A ++M+T G I
Sbjct: 507 CREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTI 566
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
++YN LI CK + E A LL EM +G D T+ +I+ + +++G
Sbjct: 567 LTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLEG 619
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 116/229 (50%), Gaps = 4/229 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ + +L+ M GI P +VTY SLI + + + + L ++ +
Sbjct: 396 ILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQE 455
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G+ PD+ +N+L+ HC G D A ++ ++M + P T+N ++ G C+ +
Sbjct: 456 GLLPDIIVFNALIDGHC--ANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVE 513
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A ++ +++ G P+ ++YN LI G K G ++ A + E+ +G P +TY ++
Sbjct: 514 EARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALI 573
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
+ +N++ + E+L M KG T D Y ++I A + L+ D
Sbjct: 574 QGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLEGNDD 622
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 148/340 (43%), Gaps = 39/340 (11%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
++ L+ +L KP+EA F + P T N ML+ K T A ++ +
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
+ L T+NI+I LCK G+L+ A+ + + G PN +TY TI+
Sbjct: 209 RMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIH--------- 259
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
G+C G+ + A + M G++ D +YN+ I
Sbjct: 260 -------------------GHCLR-------GKFQRARVIFQTMKDKGLEPDCYTYNSFI 293
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
+ CKEG+LE A L+ +M + G + T+ LIDG C G++ A + + M G
Sbjct: 294 SGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIM 353
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
++L YN + L +G++ A N+ + M K D+ T++ +++ C+ A L
Sbjct: 354 ASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGL 413
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
L + G++ +++ L +EA + SKI+
Sbjct: 414 LDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQ 453
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 184/403 (45%), Gaps = 39/403 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI YC+ + DA I M G + V+Y +LI G + +L L +M E
Sbjct: 245 LILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDN 304
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y ++ L QLG+ EA +F++M P T+ +++ LC++ D+A
Sbjct: 305 CWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAK 364
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-- 179
++ G+ + G +P +VTYN LI G CK G +A IL + + +PNA TY ++
Sbjct: 365 KILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGF 424
Query: 180 CCFRNRKYKLGL---------------------------------EILSAMKRKGYTFDG 206
C +N + L ++LS M G D
Sbjct: 425 CRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDE 484
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ Y I K G ++EA E + G++ + V Y+TLI+ YCK GK+ LLD+
Sbjct: 485 WTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDK 544
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M G + T+ LIDG CK N K ARL ++ M K + + Y ++D L KD +
Sbjct: 545 MLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDE 604
Query: 327 IDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 365
D A ++F+ M D F Y++ +H C RL A L+
Sbjct: 605 FDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLI 647
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 190/390 (48%), Gaps = 4/390 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ YC+ + ++++ +AG+S D TY SLI G RN + + + M G
Sbjct: 210 MVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKG 269
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ SY +L+H + + DEA ++F M + P T+ +++ LC+ AL
Sbjct: 270 CLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEAL 329
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
MF+ + + P + TY +LI LC+ A+ IL + + G P+ +TY ++
Sbjct: 330 NMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGY 389
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ LEILS M+ + + Y +I F + + +A + +M+ +Q ++
Sbjct: 390 CKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNV 449
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN LI+ CKEG L +AY LL M + G D++T+++ ID LCK G ++ AR E
Sbjct: 450 VTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFES 509
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ + G +N Y+ ++D K GK+ + + M V +S TY+S++ CK K
Sbjct: 510 LKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKN 569
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
A L+ +K + ++D L
Sbjct: 570 FKEARLLVDIMIKRDIEPAADTYTILIDNL 599
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 162/321 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ + IL+ M SP+ TYN LI G R + ++ LL +MLE
Sbjct: 385 LIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERK 444
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V +YN L+H + G A ++ M L P T+++ ++ LCK + A
Sbjct: 445 LQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEAR 504
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F L++ G V Y+ LI G CK G++ R++L ++ +G PN+ITY +++
Sbjct: 505 SLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGY 564
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + +K ++ M ++ Y +I +K +A D +QM++ G D+
Sbjct: 565 CKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDV 624
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
Y I+ YC G+L+ A +L+ +M +G D +T+ ID + G+I GA L+
Sbjct: 625 FIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKR 684
Query: 302 MNKIGFDSNLEAYNCIVDRLG 322
M+++G + + Y+C++ L
Sbjct: 685 MHEVGCEPSYYTYSCLIKHLS 705
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 173/360 (48%), Gaps = 4/360 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + C+ +FD ILN M E G+ P VVTYN+LI G + L + +L++L M
Sbjct: 349 VLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESN 408
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+ +YN L+ + +A + M+ L P T+NI+++G CK +A
Sbjct: 409 NCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSA 468
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + + G VP+ TY++ I LCK G + AR + + L + G N + Y+T++
Sbjct: 469 YKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDG 528
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K G +L M G + Y ++I + K KEA ++ M+ ++
Sbjct: 529 YCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPA 588
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y LI+ K+ + + A+ + D+M G D + +T I C G +K A + +
Sbjct: 589 ADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLIC 648
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EV---KDSFTYSSMVHNLCKAK 356
MN G + Y +D G+ G ID A + + M EV +TYS ++ +L AK
Sbjct: 649 KMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAK 708
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 166/362 (45%), Gaps = 14/362 (3%)
Query: 34 YNSLIAGATR----NSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 89
YN L+ +R + + S L++LD+M + P++++ N++++ +LG EA
Sbjct: 172 YNMLLMLLSRFLMIDEMKSVYLEMLDDM----VTPNIFTLNTMVNGYCKLGNVVEAELYV 227
Query: 90 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
++ L+ T T+ ++ G C+N+ D A +F + G + V+Y LI G C+A
Sbjct: 228 SKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEA 287
Query: 150 GRLRTARWILKELGDSGHAPNAITYTTIM-KCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
R+ A + ++ + P TYT I+ C RK + L + M K +
Sbjct: 288 RRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTE-ALNMFKEMTEKHCQPNVHT 346
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y +I + + +A + M+ G+ +V+YN LI+ YCK+G +A +L ME
Sbjct: 347 YTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLME 406
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
+ T+ LI G C+ NI A L M + N+ YN ++ K+G +
Sbjct: 407 SNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLG 466
Query: 329 HAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 384
A + ES V D +TYS + LCK + A L S + G++ + ++
Sbjct: 467 SAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLI 526
Query: 385 DG 386
DG
Sbjct: 527 DG 528
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 144/340 (42%), Gaps = 4/340 (1%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
YN L+ L + DE V+ +M+ +TP T N M+NG CK A +
Sbjct: 172 YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIV 231
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
+ G + TY LI G C+ + A I + + G N ++YT ++ R+
Sbjct: 232 QAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVD 291
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
L++ S M Y +I A ++GR EA + ++M Q ++ +Y LI
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLI 351
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
C++ + A +L+ M ++G T+ LIDG CK G A L M
Sbjct: 352 CSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCS 411
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
N YN ++ + I A+++ M + + TY+ ++H CK L SA KL
Sbjct: 412 PNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKL 471
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
L +SG+ + +D L G EA+ + ++
Sbjct: 472 LSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLK 511
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 150/348 (43%), Gaps = 7/348 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ G +L++M AG P+ +TYNSLI G + + L+D M++
Sbjct: 525 LIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRD 584
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P +Y L+ L + + D+A+ +F M+ P + ++ C + +A
Sbjct: 585 IEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAE 644
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G +P+ + Y + I + G + A ILK + + G P+ TY+ ++K
Sbjct: 645 VLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHL 704
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ + G + F C + + D +M G +
Sbjct: 705 SNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDY------EFTLDLFGKMAEHGCAPNA 758
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y I CK G LE A+ L D M+++G ++ + L+ C+ G A L+
Sbjct: 759 NTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDI 818
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMV 349
M + +L++ ++ L +G + A VF S ++ + Y MV
Sbjct: 819 MIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSF-LQCEYNYDEMV 865
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 114/293 (38%), Gaps = 22/293 (7%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
I AYC ++ +M GI PD + Y I R + + +L M E+G
Sbjct: 630 FIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVG 689
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT---- 117
P ++Y+ L+ L KP E + ++ + + +G+ N ++
Sbjct: 690 CEPSYYTYSCLIKHLSN-AKPKEVSS-------------SSELSDLSSGVASNDFSNCWR 735
Query: 118 ----DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+ L +F + +HG P TY I GLCK G L A + + + G +PN
Sbjct: 736 RVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDI 795
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
Y +++ C + Y + L M + ++ G ++A +
Sbjct: 796 YNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFL 855
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
D + + LI+ K+G + L ME QG + T+++LI+G
Sbjct: 856 QCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGF 908
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 184/368 (50%), Gaps = 8/368 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ D +L R+ E +VV +N++I G L+ + +L + M G
Sbjct: 286 LLQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKG 341
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +Y+ LMH L +LG+ A R+ ++M P T+ I+L+ CKN D+
Sbjct: 342 CQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTR 401
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G YN +I LCK GR+ A +++E+ G P+ +Y TI+
Sbjct: 402 ALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHL 461
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N + + + + +G +G Y T+I A ++ GR ++A ++M+ G LD+
Sbjct: 462 CNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDV 521
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
VSYN LI CK+G ++ + +LL+EM ++G + + ++ ILI LCK ++ A +
Sbjct: 522 VSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQ 581
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G ++ YN +++ L K G + A+N+ E + + D TY+ ++ CK +
Sbjct: 582 MLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRL 641
Query: 358 LPSASKLL 365
L A+ LL
Sbjct: 642 LDDAAMLL 649
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 198/434 (45%), Gaps = 35/434 (8%)
Query: 5 AYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP 64
A C+ + +L M G PD V Y ++I ++ + LL+EML MG
Sbjct: 184 ALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAA 243
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM- 123
DV +++ ++ + LG+ EA R+ M+ P T+ +L GLC+ R D A M
Sbjct: 244 DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML 303
Query: 124 ------------------------------FRGLQKHGFVPELVTYNILIKGLCKAGRLR 153
+ + G P+ TY+IL+ GLCK GR+
Sbjct: 304 GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIS 363
Query: 154 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
+A +L+E+ G APN +TYT ++ +N + +L M KG T + GY +I
Sbjct: 364 SAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMI 423
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
A K GR+ EA +++M + G DI SYNT+I C ++E A + + + ++G
Sbjct: 424 YALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVV 483
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
+ T+ +I L + G + A + M G ++ +YN ++ + KDG +D ++ +
Sbjct: 484 ANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVL 543
Query: 334 FESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
E M K ++ +Y+ ++ LCK +R+ A +L L G+ +++GL
Sbjct: 544 LEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCK 603
Query: 390 SGCRREAKKIQSKI 403
G A + K+
Sbjct: 604 MGWMHAALNLLEKL 617
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 184/395 (46%), Gaps = 43/395 (10%)
Query: 50 SLDLLDEMLE-MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD-LTPCTATFNIM 107
+L LLD++ G+ P SYN ++ L + +A +++ M+ D + P T TF +
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181
Query: 108 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 167
LC+ + AL + RG+ +HG VP+ V Y +I LC G + A +L E+ G
Sbjct: 182 ARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241
Query: 168 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-------YTFDGFGYC---------- 210
A + T+ +++ + + ++ M KG Y F G C
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA 301
Query: 211 --------------TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
TVI + G+L EAT+ E M G Q D +Y+ L++ CK G+
Sbjct: 302 MLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGR 361
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+ +A LL EMEK+GF + T+TI++ CK G R LE M+ G N + YN
Sbjct: 362 ISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNG 421
Query: 317 IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++ L KDG++D A+ + + M + D +Y++++++LC +++ A + + L+ G
Sbjct: 422 MIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEG 481
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
V ++ L G + Q +R+AK
Sbjct: 482 VVANGITYNTIIHALLRDG------RWQDAVRLAK 510
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 171/358 (47%), Gaps = 11/358 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C+ + +L M + G +P+VVTY ++ +N + + LL+EM
Sbjct: 351 ILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAK 410
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + YN +++ L + G+ DEA + Q+M P ++N ++ LC N + A
Sbjct: 411 GLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEA 470
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
MF L + G V +TYN +I L + GR + A + KE+ G + + ++Y ++K
Sbjct: 471 EHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKA 530
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ L +L M KG + Y +I+ K R+++A + +QM+ G+ D
Sbjct: 531 MCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPD 590
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+YNTLIN CK G + AA LL+++ + D T+ ILI CK + A + L
Sbjct: 591 IVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL- 649
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRL 358
+ + A + DR D ++ + KDS+ Y S N CKA L
Sbjct: 650 -------NRAMAAVCPVGDRRIMQILPDKNFKLY--LHTKDSYLYCSRA-NECKANIL 697
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 156/344 (45%), Gaps = 12/344 (3%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
+ P T+ R + +L LL M G PD Y +++H L G EA
Sbjct: 171 VPPTTFTFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 230
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ +M+ TF+ ++ G+C A R+ + G +P ++TY L++GL
Sbjct: 231 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 290
Query: 147 CKAGRLRTARWILKELGDSGHAP--NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
C+ + AR +L G P N + + T++ C K E+ M KG
Sbjct: 291 CRVRQADEARAML------GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQP 344
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D Y ++ K+GR+ A + +M G ++V+Y +++ +CK G + LL
Sbjct: 345 DAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALL 404
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+EM +G + + +I LCK G + A ++ M G + ++ +YN I+ L +
Sbjct: 405 EEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNN 464
Query: 325 GKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKL 364
+++ A ++FE++ V + TY++++H L + R A +L
Sbjct: 465 EQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRL 508
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 186/399 (46%), Gaps = 39/399 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ + D + + +RM + G P+ VTY++LI G L ++D+L+EM++ G
Sbjct: 243 LILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKG 302
Query: 62 IPPDVWSYN-----------------------------------SLMHCLFQLGKPDEAN 86
I P V++Y +L+ L + GK + A
Sbjct: 303 IEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAI 362
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
++ M+ L P T T+N ++N LC + A +F+ + HG +P TYN +IK
Sbjct: 363 GLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCF 422
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C G ++ A I ++ +G +PN ITY T++ + + +L MK G D
Sbjct: 423 CLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDA 482
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ Y +I+ F + G+L+ AT M+ G+ + V+Y +I+ Y K++ A L +
Sbjct: 483 WTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWK 542
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M + G T+ ++I G K +I A M K G N+ Y +D L ++G+
Sbjct: 543 MVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGR 602
Query: 327 IDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSA 361
A +F ME ++ F TYSS+++ LC+ R A
Sbjct: 603 TGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA 641
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 182/388 (46%), Gaps = 22/388 (5%)
Query: 8 QFVS-----FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
QF+S +D GYT+ ++ +L+ + ++ + D+ +ML GI
Sbjct: 152 QFLSEINSKYDFGYTL-------------CSFTTLLIQLGKFDMVDLARDMYIKMLNSGI 198
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P + ++N++++ L + G+ EA + + D P T+ ++ G C+N D A
Sbjct: 199 RPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFA 258
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
MF + K G P VTY+ LI GLC GRL A +L+E+ G P TYT +
Sbjct: 259 MFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLC 318
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+E+L MK++G + + +I+ + G+ + A +M+ DG+ V
Sbjct: 319 DAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV 378
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
+YN LIN C EG+ E A+ + M G T+ +I C G+I+ A + + M
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRL 358
K G N+ YN ++ K G +++A+ + E M+ D++TY+ ++ + +L
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKL 498
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDG 386
A+ L ++ G+ A++DG
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDG 526
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 182/418 (43%), Gaps = 39/418 (9%)
Query: 21 RMREAGISPDVVTYN-----------------------------------SLIAGATRNS 45
+M +GI P ++T+N SLI G RN
Sbjct: 192 KMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNH 251
Query: 46 LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 105
L + + D M++ G P+ +Y++L++ L G+ +EA + ++M+ + P T+
Sbjct: 252 NLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYT 311
Query: 106 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
I L LC + A+ + ++K G VP + T+ LI GL + G+ A + ++
Sbjct: 312 IPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD 371
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
G P +TY ++ +++ I M G Y +I F +G +++A
Sbjct: 372 GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKA 431
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
++M+ G ++++YNTLI YCK+G L A LL+ M+ G + D +T+T LI G
Sbjct: 432 MVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISG 491
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKD 341
+ G ++ A M + G N Y I+D K+D A+ +F ES +
Sbjct: 492 FSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPS 551
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
S TY+ M+ K + A +K G+ + +DGL +G A KI
Sbjct: 552 SQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKI 609
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 174/377 (46%), Gaps = 37/377 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C I ++M +AG SP+V+TYN+LI G + L+ ++ LL+ M G
Sbjct: 418 IIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNG 477
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD W+Y L+ + GK + A +F M+ ++P T+ +++G D+AL
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDAL 537
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + + G +P TYN++I G K + A ++ G PN ITYT+ +
Sbjct: 538 ALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY--MEQMVTDGVQL 239
RN + L +I M+++ Y + + Y ++I + GR ++A Y + ++ G +
Sbjct: 598 CRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEP 657
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
++ +Y TL+ C EG+ A L+ M+K+G + + + L+ G CK ++ A
Sbjct: 658 NVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIF 717
Query: 300 EYMNKIGFDSNLE-----------------------------------AYNCIVDRLGKD 324
M+ +GF +L A+ ++D L K+
Sbjct: 718 YSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKE 777
Query: 325 GKIDHAINVFESMEVKD 341
G+ D + + ME ++
Sbjct: 778 GETDLCLKLLHVMESRN 794
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 133/283 (46%), Gaps = 2/283 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID Y D + +M E+G P TYN +I+G ++ + +S + + +M++ G
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA- 120
+ P+V +Y S + L + G+ A ++F +M + P T++ ++ GLC+ ++A
Sbjct: 583 LLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAE 642
Query: 121 -LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+ L +G P + TY L+KGLC GR A ++ + G P+ Y ++
Sbjct: 643 MYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLI 702
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+N K + L I +M G+ Y +I A K ++EA + M+
Sbjct: 703 GECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNS 762
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
D V++ L++ KEG+ + LL ME + + T+ +L
Sbjct: 763 DEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 9/243 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS--LDLLDEMLE 59
ID C+ + I + M + P++ TY+SLI G + + +LL +
Sbjct: 593 FIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTH 652
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G P+V +Y +L+ L G+ EA+++ M L P + +L G CKN ++
Sbjct: 653 YGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVES 712
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
AL +F + GF L Y LI LCK + A+ I + + + + + +T ++
Sbjct: 713 ALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLD 772
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + L L++L M+ + T + +V + R A D ++ QL
Sbjct: 773 GLLKEGETDLCLKLLHVMESRNCTLN-------FQTYVMLARELSALDCAIKIPQISQQL 825
Query: 240 DIV 242
IV
Sbjct: 826 GIV 828
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 195/413 (47%), Gaps = 50/413 (12%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE--MLEM 60
I C+ + +++RM G +P+ TY L+ G C + +DE ML
Sbjct: 294 IHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGL-------CRMGKVDEARMLLN 346
Query: 61 GIP-PDVWSYNSLMHCLFQLGKPDEANRVFQD-MICGDLTPCTATFNIMLNGLCKNRYTD 118
+P P+V +N+L++ G+ DEA V + M+ P T+N ++ GLCK Y
Sbjct: 347 KVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLV 406
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
+A + +Q G P ++TY ILI CK GRL AR +L E+ G A NA+ Y ++
Sbjct: 407 SARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLI 466
Query: 179 KCCFRNRKYKLGLEILSAMKRKG-----YTFDG--FGYC--------------------- 210
++ K + L + M KG +TF+ FG C
Sbjct: 467 SALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVI 526
Query: 211 -------TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
T+I AF++ G ++EA + M+ G LD ++YN LI C+ G +E L
Sbjct: 527 ANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLAL 586
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
++M +G + + ILI+GLC+ GNI+ A L M G ++ YN +++ L K
Sbjct: 587 FEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCK 646
Query: 324 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
G+ A+N+F+ ++V+ D+ TY++++ CK A LL + SG
Sbjct: 647 TGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSG 699
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 191/404 (47%), Gaps = 48/404 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C V + Y +L++ GISP V T+ ++ + + + LL +M
Sbjct: 191 VLLAGNCPKVVPNVFYEMLSK----GISPTVYTFGVVMKALCLVNEVDSACALLKDMTRH 246
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ Y +L+H L ++G+ +E ++ ++M+ P TFN ++GLCK A
Sbjct: 247 GCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEA 306
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + GF P TY +L+ GLC+ G++ AR +L ++ + PN + + T+
Sbjct: 307 AKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTL--- 359
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM-EQMVTDGVQL 239
I +V GRL EA M E M++ G
Sbjct: 360 --------------------------------INGYVSRGRLDEAKAVMHESMLSVGCGP 387
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DI +YNTLI CK+G L +A L++EM+ +G E + T+TILID CK G ++ AR L
Sbjct: 388 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 447
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ M+ G N YNC++ L KD K+ A+N+F M K D FT++S++ LCK
Sbjct: 448 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 507
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ A L L GV ++ G +EA K+
Sbjct: 508 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKL 551
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 187/388 (48%), Gaps = 9/388 (2%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G PDV T+N I G + + + L+D ML G P+ ++Y LMH L ++GK DEA
Sbjct: 282 GCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA 341
Query: 86 NRVFQDMICGDLTPCTATFNIMLNG-LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
+ + P FN ++NG + + R + M + G P++ TYN LI
Sbjct: 342 RMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLIL 397
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
GLCK G L +AR ++ E+ G PN ITYT ++ + + + +L M KG
Sbjct: 398 GLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLAL 457
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ GY +I+A K ++++A + M + G + DI ++N+LI CK K E A L
Sbjct: 458 NAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLY 517
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+M +G + T+ LI + G ++ A + M G + YN ++ L +
Sbjct: 518 QDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRA 577
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
G I+ + +FE M K ++ + + +++ LC+ + A + L + G+
Sbjct: 578 GNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTY 637
Query: 381 KAVVDGLRHSGCRREAKKIQSKIRMAKI 408
++++GL +G +EA + K+++ I
Sbjct: 638 NSLINGLCKTGRAQEALNLFDKLQVEGI 665
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 153/291 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID +C+ + +L+ M G++ + V YN LI+ ++ + +L++ +M
Sbjct: 429 ILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSK 488
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD++++NSL+ L ++ K +EA ++QDM+ + T T+N +++ + A
Sbjct: 489 GCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEA 548
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L++ + G + +TYN LIK LC+AG + + +++ G PN I+ ++
Sbjct: 549 LKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILING 608
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + LE L M +G T D Y ++I K GR +EA + +++ +G+ D
Sbjct: 609 LCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPD 668
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
++YNTLI+ +CKEG + A+LLL GF ++ T IL+ K G+
Sbjct: 669 AITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 719
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 152/324 (46%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + ++N M+ G P+V+TY LI + L + ++LDEM G
Sbjct: 395 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 454
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ + YN L+ L + K +A +F DM P TFN ++ GLCK + AL
Sbjct: 455 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 514
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + G + +TYN LI + G ++ A ++ ++ G + ITY ++K
Sbjct: 515 GLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKAL 574
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + GL + M KG + +I + G ++ A +++ M+ G+ DI
Sbjct: 575 CRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDI 634
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN+LIN CK G+ + A L D+++ +G D T+ LI CK G A L L
Sbjct: 635 VTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSR 694
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDG 325
GF N + +V K+G
Sbjct: 695 GVDSGFIPNEVTWYILVSNFIKEG 718
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 135/294 (45%), Gaps = 49/294 (16%)
Query: 80 GKPDEANRVFQDMICGDLTPCTATF---NIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
G P +A R+ DM + C TF N++L+ L +F + G P +
Sbjct: 160 GLPGQATRLLLDM--RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTV 217
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
T+ +++K LC + +A +LK++ G PNAI Y
Sbjct: 218 YTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQ--------------------- 256
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
T+I A K+GR+ E +E+M+ G D+ ++N I+ CK +
Sbjct: 257 --------------TLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLR 302
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+ A L+D M +GF + +T+ +L+ GLC+ G + AR+ L NK+ + N+ +N
Sbjct: 303 IHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL---NKVP-NPNVVLFNT 358
Query: 317 IVDRLGKDGKIDHAINVF-ESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 365
+++ G++D A V ESM D FTY++++ LCK L SA +L+
Sbjct: 359 LINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELM 412
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 9/218 (4%)
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV---QLDIVSYNTLIN 249
+L MK++G F + ++ + + G +AT + M GV + SYN +++
Sbjct: 133 LLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM--RGVYSCEPTFRSYNVVLD 190
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
+ + + EM +G YT +++ LC + A L+ M + G
Sbjct: 191 VLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVP 250
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
N Y ++ L K G+++ + + E M + D T++ +H LCK R+ A+KL+
Sbjct: 251 NAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLV 310
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L G ++ GL G EA+ + +K+
Sbjct: 311 DRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV 348
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 98/240 (40%), Gaps = 1/240 (0%)
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHAPNAITYTTIMKCCFRNR 185
+++ G V + +++K +AG A R +L G P +Y ++
Sbjct: 137 MKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGN 196
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
K+ + M KG + + + V+ A + + A ++ M G + + Y
Sbjct: 197 CPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQ 256
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
TLI+ K G++ LL+EM G D T I GLCK I A ++ M
Sbjct: 257 TLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLR 316
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 365
GF N Y ++ L + GK+D A + + + ++++++ RL A ++
Sbjct: 317 GFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVM 376
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 194/412 (47%), Gaps = 41/412 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I++ C D ++ L ++ + G PD T+ +LI G + +L L D+M+
Sbjct: 110 IVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE 169
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V +Y +L++ L ++G A R+ + M G+ P F+ +++ LCK+R A
Sbjct: 170 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEA 229
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS--------------- 165
+F + G P +VTYN LI GLCK + ++ E+ DS
Sbjct: 230 FNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDA 289
Query: 166 --------------------GHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMKRKGYTF 204
G PN +TY +M C RN + + +++ M K
Sbjct: 290 LCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRN-EVDVAVKVFDTMVHKDCVA 348
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ Y T+I + KI + +A E+M + + V+YNTLI+ C G+L+ A L
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
EM +G D T+ L D LCK ++ A L+ + +D +++ Y I+D + +
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 468
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
G+++ A ++F ++ K + +TY+ M+H LCK L ASKL K+G
Sbjct: 469 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 520
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 170/369 (46%), Gaps = 4/369 (1%)
Query: 8 QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 67
F + D + NRM P V +N L+ + S L L +M GIPPDV+
Sbjct: 47 HFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVY 106
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+ +++ L L + D A ++ P TF ++ GLC AL +F +
Sbjct: 107 TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 166
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
GF P +VTY LI GLCK G A +L+ + PN + ++T++ ++R+
Sbjct: 167 IGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQV 226
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
I S M KG + + Y ++I K+ K T M +MV + D+ + NT+
Sbjct: 227 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 286
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
++ CKEG + A+ ++D M +G E + T+ L+DG C + A + M
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 346
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASK 363
+N+ +YN +++ K +D A+ +FE M ++ TY++++H LC RL A
Sbjct: 347 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 406
Query: 364 LLLSCLKSG 372
L + G
Sbjct: 407 LFHEMVARG 415
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 167/332 (50%), Gaps = 5/332 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + T++N M ++ I PDV T N+++ + +++ + D++D M+ G
Sbjct: 251 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG 310
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ P+V +YN+LM HCL + D A +VF M+ D ++N ++NG CK + D
Sbjct: 311 VEPNVVTYNALMDGHCL--RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDK 368
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+ +F + + P VTYN LI GLC GRL+ A + E+ G P+ +TY T+
Sbjct: 369 AMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSD 428
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+NR + +L A++ + D Y T++ + G L++A D + + G+Q
Sbjct: 429 YLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQP 488
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
++ +YN +I+ CK+G L A L EM K G + T+ ++ G + L
Sbjct: 489 NVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELL 548
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
E M GF ++ +V L DG +D ++
Sbjct: 549 EEMLARGFSVDVSTTTLLVGMLSDDG-LDQSV 579
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 183/405 (45%), Gaps = 4/405 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ + A +L M + P+VV +++LI ++ ++ + ++ EM+ G
Sbjct: 181 LINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKG 240
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P++ +YNSL+H L +L + + +M+ + P T N +++ LCK A
Sbjct: 241 ISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAH 300
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P +VTYN L+ G C + A + + N I+Y T++
Sbjct: 301 DVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGY 360
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + + M R+ T + Y T+I +GRL++A +MV G D+
Sbjct: 361 CKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDL 420
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y TL + CK L+ A LL +E ++ D +T ++DG+C+AG ++ AR
Sbjct: 421 VTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSN 480
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
++ G N+ YN ++ L K G + A +F M + TY+ + +
Sbjct: 481 LSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNE 540
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 402
+LL L G + S +V L G + K+I K
Sbjct: 541 ALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCK 585
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 161/378 (42%), Gaps = 41/378 (10%)
Query: 60 MGIPPDVWS--YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
+ +PP S +N+ DEA F M+ P T FN +L + K ++
Sbjct: 27 LSLPPPFLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHH 86
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
L + R + G P++ T I+I LC R+ A L ++ GH P+A T+TT+
Sbjct: 87 STLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTL 146
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG----------------- 220
++ K L + M +G+ + Y T+I K+G
Sbjct: 147 IRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNC 206
Query: 221 ------------------RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
++ EA + +M+T G+ +IV+YN+LI+ CK + +
Sbjct: 207 QPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTT 266
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
L++EM D +T ++D LCK G + A ++ M G + N+ YN ++D
Sbjct: 267 LMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHC 326
Query: 323 KDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
++D A+ VF++M KD +Y+++++ CK + + A L + +
Sbjct: 327 LRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTV 386
Query: 379 AQKAVVDGLRHSGCRREA 396
++ GL H G ++A
Sbjct: 387 TYNTLIHGLCHVGRLQDA 404
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 186/399 (46%), Gaps = 39/399 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ + D + + +RM + G P+ VTY++LI G L ++D+L+EM++ G
Sbjct: 243 LILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKG 302
Query: 62 IPPDVWSYN-----------------------------------SLMHCLFQLGKPDEAN 86
I P V++Y +L+ L + GK + A
Sbjct: 303 IEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAI 362
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
++ M+ L P T T+N ++N LC + A +F+ + HG +P TYN +IK
Sbjct: 363 GLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCF 422
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C G ++ A I ++ +G +PN ITY T++ + + +L MK G D
Sbjct: 423 CLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDA 482
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ Y +I+ F + G+L+ AT M+ G+ + V+Y +I+ Y K++ A L +
Sbjct: 483 WTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWK 542
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M + G T+ ++I G K +I A M K G N+ Y +D L ++G+
Sbjct: 543 MVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGR 602
Query: 327 IDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSA 361
A +F ME ++ F TYSS+++ LC+ R A
Sbjct: 603 TGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA 641
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 182/388 (46%), Gaps = 22/388 (5%)
Query: 8 QFVS-----FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
QF+S +D GYT+ ++ +L+ + ++ + D+ +ML GI
Sbjct: 152 QFLSEINSKYDFGYTL-------------CSFTTLLIQLGKFDMVDLARDMYIKMLNSGI 198
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P + ++N++++ L + G+ EA + + D P T+ ++ G C+N D A
Sbjct: 199 RPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFA 258
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
MF + K G P VTY+ LI GLC GRL A +L+E+ G P TYT +
Sbjct: 259 MFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLC 318
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+E+L MK++G + + +I+ + G+ + A +M+ DG+ V
Sbjct: 319 DAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV 378
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
+YN LIN C EG+ E A+ + M G T+ +I C G+I+ A + + M
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRL 358
K G N+ YN ++ K G +++A+ + E M+ D++TY+ ++ + +L
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKL 498
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDG 386
A+ L ++ G+ A++DG
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDG 526
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 182/418 (43%), Gaps = 39/418 (9%)
Query: 21 RMREAGISPDVVTYN-----------------------------------SLIAGATRNS 45
+M +GI P ++T+N SLI G RN
Sbjct: 192 KMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNH 251
Query: 46 LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 105
L + + D M++ G P+ +Y++L++ L G+ +EA + ++M+ + P T+
Sbjct: 252 NLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYT 311
Query: 106 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
I L LC + A+ + ++K G VP + T+ LI GL + G+ A + ++
Sbjct: 312 IPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD 371
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
G P +TY ++ +++ I M G Y +I F +G +++A
Sbjct: 372 GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKA 431
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
++M+ G ++++YNTLI YCK+G L A LL+ M+ G + D +T+T LI G
Sbjct: 432 MVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISG 491
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKD 341
+ G ++ A M + G N Y I+D K+D A+ +F ES +
Sbjct: 492 FSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPS 551
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
S TY+ M+ K + A +K G+ + +DGL +G A KI
Sbjct: 552 SQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKI 609
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 173/377 (45%), Gaps = 37/377 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C I ++M +AG SP+V+TYN+LI G + L+ ++ LL+ M G
Sbjct: 418 IIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNG 477
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD W+Y L+ + GK + A +F M+ ++P T+ +++G D+AL
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDAL 537
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + + G +P TYN++I G K + A ++ G PN ITYT+ +
Sbjct: 538 ALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY--MEQMVTDGVQL 239
RN + L +I M+++ Y + + Y ++I + GR ++A Y + ++ G +
Sbjct: 598 CRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEP 657
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
++ +Y TL+ C EG+ A L+ M+K+G + + + L+ G CK ++ A
Sbjct: 658 NVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIF 717
Query: 300 EYMNKIGFDSNLEAYNCIV-----------------------------------DRLGKD 324
M+ +GF +L Y ++ D L K+
Sbjct: 718 YSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKE 777
Query: 325 GKIDHAINVFESMEVKD 341
G+ D + + ME ++
Sbjct: 778 GETDLCLKLLHVMESRN 794
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 132/283 (46%), Gaps = 2/283 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID Y D + +M E+G P TYN +I+G ++ + +S + + +M++ G
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA- 120
+ P+V +Y S + L + G+ A ++F +M + P T++ ++ GLC+ ++A
Sbjct: 583 LLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAE 642
Query: 121 -LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+ L +G P + TY L+KGLC GR A ++ + G P+ Y ++
Sbjct: 643 MYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLI 702
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+N K + L I +M G+ Y +I A K ++EA + M+
Sbjct: 703 GECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNS 762
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
D V + L++ KEG+ + LL ME + + T+ +L
Sbjct: 763 DEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 9/243 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS--LDLLDEMLE 59
ID C+ + I + M + P++ TY+SLI G + + +LL +
Sbjct: 593 FIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTH 652
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G P+V +Y +L+ L G+ EA+++ M L P + +L G CKN ++
Sbjct: 653 YGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVES 712
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
AL +F + GF L Y LI LCK + A+ I + + + + + +T ++
Sbjct: 713 ALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLD 772
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + L L++L M+ + T + +V + R A D ++ QL
Sbjct: 773 GLLKEGETDLCLKLLHVMESRNCTLN-------FQTYVMLARELSALDCAIKIPQISQQL 825
Query: 240 DIV 242
IV
Sbjct: 826 GIV 828
>gi|359488082|ref|XP_002266772.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Vitis vinifera]
Length = 498
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 196/411 (47%), Gaps = 4/411 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + S + +L M +G PD++TYN L+ G + LL +++LLDEM G
Sbjct: 80 LIRGLIKLESTERATRVLKIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSG 139
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PPD +YN+++ C+F G D+A ++D + T+ +++ +CK+ T A+
Sbjct: 140 CPPDAITYNTILRCMFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAM 199
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P++VTYN L+ CK G+ I+ L G PN +TY T++
Sbjct: 200 EVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSL 259
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + EIL M Y +I K G L A ++ +QMV+ DI
Sbjct: 260 CTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDI 319
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YNTL+ CKEG ++ A LL + T+ I+IDGL K G ++ A
Sbjct: 320 ITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGE 379
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS----MVHNLCKAKR 357
M + GF + + + L + ++ A+ + + M ++ +S ++H LCK K+
Sbjct: 380 MIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCKKKK 439
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+ A ++L + S + + A++ G+ +G EA ++ K+ K+
Sbjct: 440 VDIAIQVLEMMVSSQCKPNEEIYSAIIKGVGAAGMIEEANQLHQKLTELKV 490
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 164/343 (47%), Gaps = 4/343 (1%)
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 124
D + N ++ L GK A+R+ M + P + ++ GL K T+ A R+
Sbjct: 38 DEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVL 97
Query: 125 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
+ + G +P+++TYN+L+ GLCK G L+TA +L E+ SG P+AITY TI++C F +
Sbjct: 98 KIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDH 157
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
+ + RKG Y +I K +A + +E M +G DIV+Y
Sbjct: 158 GGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTY 217
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
N+L+N CK+GK E L++ + G + T+ L+ LC G L MN
Sbjct: 218 NSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNT 277
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPS 360
+ YN +++ L K G +D AIN F+ M + D TY++++ LCK +
Sbjct: 278 TSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDE 337
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A LL S + V+DGL GC +A ++ ++
Sbjct: 338 ALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEM 380
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 148/350 (42%), Gaps = 35/350 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ +L M G PD+VTYNSL+ + + ++ +L
Sbjct: 184 VLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSH 243
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ +YN+L+H L G DE + + M P T+NI++NGLCK D A
Sbjct: 244 GMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKYGLLDRA 303
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ F + H +P+++TYN L+ LCK G + A +L L D+ +P ITY
Sbjct: 304 INFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYN----- 358
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
VI K G +++A + +M+ G D
Sbjct: 359 ------------------------------IVIDGLAKKGCMEKAMELYGEMIERGFAPD 388
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++ TL + +E A ++L EM K+ +I GLCK + A LE
Sbjct: 389 DITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCKKKKVDIAIQVLE 448
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVH 350
M N E Y+ I+ +G G I+ A + + + F +M H
Sbjct: 449 MMVSSQCKPNEEIYSAIIKGVGAAGMIEEANQLHQKLTELKVFREETMPH 498
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 160/369 (43%), Gaps = 6/369 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
ML+ C+ +L+ M +G PD +TYN+++ + ++ + L
Sbjct: 114 MLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAIGFWKDQLRK 173
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN-RYTDN 119
G P + +Y L+ + + +A V +DM P T+N ++N CK +Y D
Sbjct: 174 GCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDT 233
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
AL ++ L HG P VTYN L+ LC G IL + + P +TY ++
Sbjct: 234 ALIIYN-LLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILIN 292
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + M D Y T++AA K G + EA + +
Sbjct: 293 GLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSP 352
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+++YN +I+ K+G +E A L EM ++GF D TH L GL + ++ A + L
Sbjct: 353 GLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRTLFWGLFRLDLVEDALVIL 412
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKA 355
+ MNK A+ ++ L K K+D AI V E M + YS+++ + A
Sbjct: 413 KEMNKRNQRIKNSAFRFVIHGLCKKKKVDIAIQVLEMMVSSQCKPNEEIYSAIIKGVGAA 472
Query: 356 KRLPSASKL 364
+ A++L
Sbjct: 473 GMIEEANQL 481
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 185/380 (48%), Gaps = 5/380 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P +++L + ++ ++ +M + P S N L+H +LGK D R
Sbjct: 23 PGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 82
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
F+DMI P T+NIM++ +CK + A +F ++ G +P+ VTYN +I G K
Sbjct: 83 FKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGK 142
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
GRL +E+ D P+ ITY ++ C + K GLE MKR G +
Sbjct: 143 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVS 202
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y T++ AF K G +++A + M G+ + +Y +LI+ YCK G L A+ L +EM
Sbjct: 203 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEML 262
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
+ G E + T+T LIDGLC N L+ M ++ + + ++D L K+ +
Sbjct: 263 QVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVS 322
Query: 329 HAINVFESME-----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
AI+ F + ++ Y++M+ LCK ++ +A+ L + G+ ++A ++
Sbjct: 323 KAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSL 382
Query: 384 VDGLRHSGCRREAKKIQSKI 403
+DG G EA ++ K+
Sbjct: 383 MDGNFKQGNVLEALALRDKM 402
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 164/340 (48%), Gaps = 5/340 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ +A + M+ G+ PD VTYNS+I G + L ++ +EM +M
Sbjct: 100 IMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDM 159
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV +YN+L++C + GK + F++M L P +++ +++ CK A
Sbjct: 160 CCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQA 219
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK- 179
++ + +++ G VP TY LI CK G L A + E+ G N +TYT ++
Sbjct: 220 IKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDG 279
Query: 180 -CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GV 237
C + N GL +L M +C +I K + +A DY ++ D G+
Sbjct: 280 LCGWENPTE--GLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGL 337
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
Q + Y +I+ CK ++EAA L ++M ++G D+ +T L+DG K GN+ A
Sbjct: 338 QANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALA 397
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
+ M + G +L AY +V L ++ A + E M
Sbjct: 398 LRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 437
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 177/404 (43%), Gaps = 46/404 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ + + D M AG P V TYN +I + + + L +EM G
Sbjct: 66 LLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 125
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +YNS++ ++G+ D+ F++M P T+N ++N CK L
Sbjct: 126 LIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGL 185
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
FR ++++G P +V+Y+ L+ CK G ++ A ++ G PN TYT++
Sbjct: 186 EFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSL---- 241
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
I A+ KIG L +A +M+ GV+ ++
Sbjct: 242 -------------------------------IDAYCKIGNLSDAFRLANEMLQVGVEWNV 270
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y LI+ C LLDEM + + T +LIDGLCK + A ++Y
Sbjct: 271 VTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKA---IDY 327
Query: 302 MNKIGFDSNLEA----YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 353
+I D L+A Y ++D L K +++ A +FE M V D Y+S++
Sbjct: 328 FGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNF 387
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
K + A L +++G+++ A ++V GL H ++A+
Sbjct: 388 KQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKAR 431
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 113/242 (46%), Gaps = 1/242 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+DA+C+ MR G+ P+ TY SLI + LS + L +EML++G
Sbjct: 206 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVG 265
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ +V +Y +L+ L P E + +M+ D+ TF ++++GLCKN+ A+
Sbjct: 266 VEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAI 325
Query: 122 RMF-RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
F R G Y +I GLCK ++ A + +++ G P+ YT++M
Sbjct: 326 DYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDG 385
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+ L + M G D Y +++ +L++A ++E+M+ +G+ D
Sbjct: 386 NFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 445
Query: 241 IV 242
V
Sbjct: 446 EV 447
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query: 206 GFG-YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
GFG + + + + +G ++EA +M V S N L++ + K GK +
Sbjct: 24 GFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFF 83
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+M G + +T+ I+ID +CK G+++ AR E M G + YN ++D GK
Sbjct: 84 KDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKV 143
Query: 325 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
G++D + FE M+ D TY+++++ CK +LP + ++G++ +
Sbjct: 144 GRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSY 203
Query: 381 KAVVDGLRHSGCRREAKKIQSKIR 404
+VD G ++A K +R
Sbjct: 204 STLVDAFCKEGMMQQAIKFYVDMR 227
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 198/425 (46%), Gaps = 43/425 (10%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYN 70
DA +L RM E G +PDV +Y +L+ G + +L+ M E G PP+V SY
Sbjct: 197 DAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYT 256
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+++H F+ G +A +F M+ + P T N +++GLCK + D A + + +
Sbjct: 257 TVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDE 316
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
+P TYN LI G +G+ A ILKE+ G PN +TY+ ++ C ++ +
Sbjct: 317 HIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEA 376
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
EI ++M + G + Y +++ + G L + + + MV +G++ +N I
Sbjct: 377 REIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYA 436
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI------------------ 292
YCK G+L+ A L ++M++QGF D +T +IDGLCK G +
Sbjct: 437 YCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPD 496
Query: 293 ------------------KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
K L E M++ G N+ +N ++D+L K+GK+ A +F
Sbjct: 497 IITFNTLIHGFALHGKWEKAEELFYEMMDR-GIPPNVNTFNSMIDKLFKEGKVTEARKLF 555
Query: 335 ESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
+ M + +Y++M+H A + KLL L G++ ++DG+
Sbjct: 556 DLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSM 615
Query: 391 GCRRE 395
G + +
Sbjct: 616 GLKPD 620
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 163/371 (43%), Gaps = 51/371 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ + D +L +M + I P+ TYNSLI G + + ++ +L EM G
Sbjct: 293 VIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDG 352
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT------------------ 103
P+V +Y+ L+ CL + G EA +F MI P +T
Sbjct: 353 QRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMN 412
Query: 104 -----------------FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
FNI + CK D A F +Q+ GF+P++V Y +I GL
Sbjct: 413 NVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGL 472
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK GRL A ++ D G +P+ IT+ T++ + K++ E+ M +G +
Sbjct: 473 CKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNV 532
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ ++I K G++ EA + M G + ++VSYNT+I+ Y G++ LLD+
Sbjct: 533 NTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDD 592
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M G + T L+DG M +G ++ ++D +DG+
Sbjct: 593 MLLIGLKPTAVTFNTLLDG----------------MVSMGLKPDVVTCKTLIDSCCEDGR 636
Query: 327 IDHAINVFESM 337
I+ + +F M
Sbjct: 637 IEDILTLFREM 647
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 134/294 (45%), Gaps = 18/294 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG-ATRNSLLSCSLDLLDEMLE 59
MLID C+ I N M ++G P+ TY SL+ G AT +L+ + ++ D M++
Sbjct: 362 MLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMN-NVKDLMVQ 420
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G+ P +N ++ + G+ DEA+ F M P + +++GLCK D+
Sbjct: 421 NGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDD 480
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+ F + G P+++T+N LI G G+ A + E+ D G PN T+ +++
Sbjct: 481 AMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMID 540
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
F+ K ++ M R G + Y T+I + G + E ++ M+ G++
Sbjct: 541 KLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKP 600
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
V++NT LLD M G + D T LID C+ G I+
Sbjct: 601 TAVTFNT----------------LLDGMVSMGLKPDVVTCKTLIDSCCEDGRIE 638
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 145/334 (43%), Gaps = 9/334 (2%)
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ ++ L+ C G + +I L TF +L LC + T +A+
Sbjct: 140 VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAM 199
Query: 122 RM-FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH--APNAITYTTIM 178
+ R + + G P++ +Y L+KGLC + A ++ + + G PN ++YTT++
Sbjct: 200 NIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVI 259
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
F+ + M G + +VI K+ + +A ++QM+ + +
Sbjct: 260 HGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIM 319
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+ +YN+LI+ Y G+ A +L EM + G + T+++LID LCK+G AR
Sbjct: 320 PNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREI 379
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL-----C 353
M + G N Y ++ +G + NV + M V++ V N+ C
Sbjct: 380 FNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLM-VQNGMRPGRHVFNIEIYAYC 438
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
K RL AS + G A V+DGL
Sbjct: 439 KCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGL 472
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 146/349 (41%), Gaps = 32/349 (9%)
Query: 50 SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 109
+LDL DE+L+ P +++ N L+ V + + + A M N
Sbjct: 83 ALDLFDELLQRARPGSIYALNQLL------------TTVARAPVSSSVRDGPALAVSMFN 130
Query: 110 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 169
RM R K P++ T+ ILI C AG L L ++ +G
Sbjct: 131 ------------RMARAGAKK-VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRA 177
Query: 170 NAITYTTIMKC-CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
A+T+T +++ C R +L M G T D F Y T++ + +EA +
Sbjct: 178 QAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAEL 237
Query: 229 MEQMVTDG--VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ M DG ++VSY T+I+ + KEG + AY L +M G + T +IDGL
Sbjct: 238 IHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGL 297
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDS 342
CK + A L+ M N YN ++ G+ A+ + + M + +
Sbjct: 298 CKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNV 357
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
TYS ++ LCK+ A ++ S ++SG + S +++ G G
Sbjct: 358 VTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEG 406
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 194/403 (48%), Gaps = 6/403 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ + + + Y + M + GI P+VVTY ++I G + ++ + + +M++ G
Sbjct: 167 VINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRG 226
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +YN L+H GK E ++ ++M L P T+ ++L+ LCKN A
Sbjct: 227 VKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREAR 286
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F + + G P++ Y IL+ G G L L + +G +PN + IM C
Sbjct: 287 LFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIF-NIMFCA 345
Query: 182 FRNRKY-KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + + I + M+++G + D + +I A K+GR+ +A QM+ +GV +
Sbjct: 346 YAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPN 405
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I +++L+ C GK E A L E+ QG D L+ LC G + A+ ++
Sbjct: 406 IFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLID 465
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M ++G N+ +YN +V G+ID A + + M + FTY+ ++ CKA+
Sbjct: 466 LMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKAR 525
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
R+ A L L GV + + ++ GL +G EA ++
Sbjct: 526 RVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANEL 568
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 195/404 (48%), Gaps = 5/404 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD-LLDEMLE 59
+LI +C+ + G+ + + G +V+ + L+ G + + D LL M E
Sbjct: 95 ILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSE 154
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G PPDV +YN++++ F+ G+ ++A +F +M+ + P T+ +++GLCK + D
Sbjct: 155 FGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDR 214
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +F+ + G P+ TYN LI G G+ + +L+E+ G P+ ITY ++
Sbjct: 215 AKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLD 274
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+N + + +M RKG D Y ++ + G L E +++ MV +GV
Sbjct: 275 YLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSP 334
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ +N + Y K+ +E A + ++M +QG D + LID LCK G + A L
Sbjct: 335 NRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQF 394
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
M G N+ ++ +V L GK + A +F + + D+ +++++ NLC
Sbjct: 395 NQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNE 454
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
R+ A +L+ ++ GVR + +V G +G EA K+
Sbjct: 455 GRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKL 498
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 171/368 (46%), Gaps = 4/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI Y + +L M G+ PD +TY L+ +N + D M G
Sbjct: 237 LIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKG 296
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV Y L+H G E + M+ ++P FNIM K + A+
Sbjct: 297 IKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAM 356
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++ G P++V++ LI LCK GR+ A ++ + G PN +++++
Sbjct: 357 HIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGL 416
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K++ E+ + +G D + T++ GR+ EA ++ M+ GV+ ++
Sbjct: 417 CTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNV 476
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+SYNTL+ +C G+++ A LLD M G + +++T+TIL+ G CKA + A
Sbjct: 477 ISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFRE 536
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHNLCKAKR 357
M G + YN I+ L + G+ A +N+ S D +TY+ +++ LCK
Sbjct: 537 MLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNF 596
Query: 358 LPSASKLL 365
+ A K+
Sbjct: 597 VDEAFKMF 604
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 168/350 (48%)
Query: 5 AYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP 64
AY + + I N+MR+ G+SPDVV++ +LI + + ++ ++M+ G+ P
Sbjct: 345 AYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTP 404
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 124
+++ ++SL++ L +GK ++A +F +++ + FN ++ LC A R+
Sbjct: 405 NIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLI 464
Query: 125 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
+ + G P +++YN L+ G C GR+ A +L + +G PN TYT +++ +
Sbjct: 465 DLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKA 524
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
R+ + M KG T Y T++ + GR EA + M+ + DI +Y
Sbjct: 525 RRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTY 584
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
N ++N CK ++ A+ + + + + D T I+I L K G + A ++
Sbjct: 585 NIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISA 644
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCK 354
G ++ Y I + L ++G + +F +ME + S M++ L +
Sbjct: 645 YGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVR 694
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 187/398 (46%), Gaps = 10/398 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ Y + ++ L+ M G+SP+ +N + + +++ ++ + ++M +
Sbjct: 306 ILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQ 365
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV S+ +L+ L +LG+ D+A F MI +TP F+ ++ GLC + A
Sbjct: 366 GLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKA 425
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G + V +N L+ LC GR+ A+ ++ + G PN I+Y T++
Sbjct: 426 EELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAG 485
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++L M G + F Y ++ + K R+ +A +M+ GV
Sbjct: 486 HCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPV 545
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
+ +YNT+++ + G+ A L M +CD YT+ I+++GLCK + A ++
Sbjct: 546 VATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFR 605
Query: 300 EYMNKIGFDSNLEA--YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 353
+K D L++ +N ++ L K G+ + A+++F ++ V D TY + NL
Sbjct: 606 RLCSK---DPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLI 662
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ L L + KSG A+V L H G
Sbjct: 663 EEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRG 700
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 155/349 (44%), Gaps = 41/349 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG--------------------- 40
LIDA C+ D N+M G++P++ ++SL+ G
Sbjct: 377 LIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQG 436
Query: 41 ----ATRNSLLSCSL----------DLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDE 84
A + L C+L L+D M+ +G+ P+V SYN+L+ HCL G+ DE
Sbjct: 437 ICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCL--TGRIDE 494
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
A ++ M+ L P T+ I+L G CK R D+A +FR + G P + TYN ++
Sbjct: 495 AAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILH 554
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
GL + GR A + + +S + TY I+ +N ++ + K
Sbjct: 555 GLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQL 614
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D + +I A +K GR ++A D + G+ D+V+Y + +EG L L
Sbjct: 615 DSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLF 674
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
MEK G + + L+ L G+I A ++L +++ F +LEA
Sbjct: 675 SAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNF--SLEA 721
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 148/325 (45%), Gaps = 10/325 (3%)
Query: 37 LIAGATRNSLLSC--SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV---FQD 91
+IA R+ L +L L DE+L P V ++N L+ + + G + RV F
Sbjct: 18 VIASRARSGSLGLDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTR 77
Query: 92 MI---CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
M + P T++I++ C+ ++ F + K G+ ++ + L+KGLC
Sbjct: 78 MARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCD 137
Query: 149 AGRLRTARWI-LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
A R+ A I L + + G P+ + Y T++ FR + + + M +G +
Sbjct: 138 AKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVV 197
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y TVI K + A +QM+ GV+ D +YN LI+ Y GK + +L+EM
Sbjct: 198 TYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEM 257
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
G E D T+ +L+D LCK G + ARL + M + G ++ Y ++ G +
Sbjct: 258 STHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGAL 317
Query: 328 DHAINVFESMEVKDSFTYSSMVHNL 352
++ F + V + + + + N+
Sbjct: 318 SE-MHSFLDLMVGNGVSPNRRIFNI 341
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 188/393 (47%), Gaps = 4/393 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ + CQ F+ ++ M G SP+V +Y+ LIAG R + + +LL+EM++ G
Sbjct: 58 LLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGG 117
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +Y SL+ L ++GK EA +F M+ P +N++++G K A
Sbjct: 118 HQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAY 177
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+F + + G +P + TYN L+ G + G + + K++ G PN T+ ++
Sbjct: 178 RLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGF 237
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + M+ G D Y T+I G+ EA + +M+ GV DI
Sbjct: 238 CKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDI 297
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
VSYN LI+ Y K G L+ A L E+ K G E D ++++ +ID LC+AG + A + +
Sbjct: 298 VSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKD 357
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G + +V L + ++ + +F++M V Y+ +++ LCKAKR
Sbjct: 358 MIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKR 417
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
++ + G K +++ LR S
Sbjct: 418 SDDVCEIFHELTERGFSPDVEISKVILETLRRS 450
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 172/362 (47%), Gaps = 4/362 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D Y N M AG P+ TY L+ + + + M G P+V+SY+ L
Sbjct: 34 DHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSIL 93
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ L + K DEA + +MI G P T+ +L+GLCK A+ +F + G
Sbjct: 94 IAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGC 153
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P+ V YN+LI G K G + A + +E+ + G P TY +++ R ++
Sbjct: 154 PPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQS 213
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ M R+G + F + ++ F K+G + EA +M + G D+VSYNTLI C
Sbjct: 214 LFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMC 273
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
+GK A LL EM + G D ++ ILIDG K+G + A + K G + +
Sbjct: 274 SKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAF 333
Query: 313 AYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
+Y+ I+D L + GK+ A VF+ M D+ +V LC+ +RL + +L +
Sbjct: 334 SYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAM 393
Query: 369 LK 370
+K
Sbjct: 394 VK 395
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 175/367 (47%), Gaps = 43/367 (11%)
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
SYN L+ L + G+ D + DM+ P T T+ +L LC+ + + A +FRG+
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
G P + +Y+ILI GLC+ ++ A +L E+ D GH PN +TY +++ + K
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
K +++ S M +G DG Y +I F K G + EA E+M+ G + +YN+L
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHLEY----- 301
++ + ++G+ L +M +QG + +T L+DG CK G+ ++ RL LE
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258
Query: 302 -----------------------------MNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
M + G ++ +YN ++D K G +DHAI
Sbjct: 259 PPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIK 318
Query: 333 VF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
+F +S D+F+YS+++ LC+A ++ +A + + +G + AVV L
Sbjct: 319 LFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANG----SAPDAAVVIPLV 374
Query: 389 HSGCRRE 395
CR E
Sbjct: 375 IGLCRGE 381
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 81/204 (39%), Gaps = 7/204 (3%)
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
Y Y ++ K GR M+ G + +Y L+ C+ + E A
Sbjct: 13 YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEAR 72
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+ M QG + ++++ILI GLC+ + A L M G N+ Y ++ L
Sbjct: 73 SVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGL 132
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
K GK+ A+++F M + D Y+ ++ K + A +L L+ G
Sbjct: 133 CKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTV 192
Query: 378 SAQKAVVDGLRHSGCRREAKKIQS 401
+++ G G E ++QS
Sbjct: 193 FTYNSLLSGFSRKG---EFGRVQS 213
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 51/119 (42%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ A + + M G +PD L+ G R L+ S +L M++
Sbjct: 338 IIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFE 397
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P + YN LM+ L + + D+ +F ++ +P ++L L ++ D A
Sbjct: 398 CVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKDAA 456
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 197/415 (47%), Gaps = 9/415 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + Q F +L MRE GI+PD YNSLI G ++ + + L EM+E G
Sbjct: 461 LIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENG 520
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD ++Y + + + G+ A++ ++M+ + P ++N CK A
Sbjct: 521 FKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEAC 580
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
FR + + G + + TY +L+ GL K G++ A I E+ G AP+ +Y T++
Sbjct: 581 SAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGF 640
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + I M + G T + Y ++ F + G +++A + +++M G +
Sbjct: 641 SKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNA 700
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y T+I+ YCK G L A+ L DEM+ +G D + +T L+DG C+ +++ A E
Sbjct: 701 VTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFE- 759
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV--------FESMEVKDSFTYSSMVHNLC 353
N+ G S+ +N +++ + K GK + ++ F+ + TY+ M+ LC
Sbjct: 760 TNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLC 819
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
K L +A +L K+ + ++++G G R E + ++ A I
Sbjct: 820 KEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGI 874
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 166/336 (49%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
+ C D Y I+ M +G P+VV Y +LI + S ++ +L EM E GI
Sbjct: 427 VKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGI 486
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
PD + YNSL+ L + K DEA +M+ P T+ ++G + +A +
Sbjct: 487 APDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADK 546
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ + + G +P V LI CK G++ A + + + G +A TYT +M
Sbjct: 547 YVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLV 606
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+N K EI M+ KG D F Y T+I F K+G +++A+ ++MV G+ +++
Sbjct: 607 KNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVI 666
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
YN L+ +C+ G++E A LLDEM +GF + T+ +IDG CK+G++ A + M
Sbjct: 667 IYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEM 726
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
G + Y +VD + ++ AI +FE+ E
Sbjct: 727 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNE 762
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 175/364 (48%), Gaps = 4/364 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ + + + GY +L +++ I TY + + G + L + +++ EM G
Sbjct: 391 LIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASG 450
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V Y +L+ Q + +A RV ++M + P T +N ++ GL K + D A
Sbjct: 451 CRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEAR 510
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++GF P+ TY I G +AG +A +KE+ + G PN + T ++
Sbjct: 511 SFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEY 570
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K +M +G D Y ++ VK G++ +A + +M G+ D+
Sbjct: 571 CKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDV 630
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
SY TLI+ + K G ++ A + DEM + G + + +L+ G C++G I+ A+ L+
Sbjct: 631 FSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDE 690
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M+ GF N Y I+D K G + A +F+ M++K DSF Y+++V C+
Sbjct: 691 MSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLND 750
Query: 358 LPSA 361
+ A
Sbjct: 751 VERA 754
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 188/403 (46%), Gaps = 4/403 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ + ++L M G+ D V Y+ LI G + + L+ EM+
Sbjct: 285 LLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSH 344
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D Y+ + + + G ++A +F MI +TP + ++ G + +
Sbjct: 345 GFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKG 404
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++K V TY +KG+C +G L A I+KE+G SG PN + YTT++K
Sbjct: 405 YELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKT 464
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ + +L M+ +G D F Y ++I K ++ EA ++ +MV +G + D
Sbjct: 465 FLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPD 524
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y I+ Y + G+ +A + EM + G +K T LI+ CK G + A
Sbjct: 525 AFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFR 584
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + G + + Y +++ L K+GK++ A +F M K D F+Y +++ K
Sbjct: 585 SMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLG 644
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ AS + +++G+ ++ G SG +AK++
Sbjct: 645 NMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKEL 687
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 187/428 (43%), Gaps = 25/428 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL------- 54
L+DA + D + + M E + DV +Y LI R+ + + D+L
Sbjct: 195 LLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEEL 254
Query: 55 -------DEMLEM-------GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPC 100
DE LE+ G+ P SYN L+ L + + ++A + +M L
Sbjct: 255 GTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFAD 314
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
++I+++GL K R D A + + HGF + + Y+ I + K G + A+ +
Sbjct: 315 NVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFD 374
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
+ G P A Y ++++ FR + + G E+L +K++ + Y T + G
Sbjct: 375 GMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSG 434
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
L A + +++M G + ++V Y TLI + ++ + A +L EM +QG D + +
Sbjct: 435 DLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYN 494
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM--- 337
LI GL KA + AR L M + GF + Y + + G+ A + M
Sbjct: 495 SLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLEC 554
Query: 338 -EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ + + +++ CK ++ A S ++ G+ +++GL +G +A
Sbjct: 555 GVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDA 614
Query: 397 KKIQSKIR 404
++I ++R
Sbjct: 615 EEIFHEMR 622
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 148/315 (46%), Gaps = 10/315 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID + + + +I + M +AG++ +V+ YN L+ G R+ + + +LLDEM G
Sbjct: 636 LIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKG 695
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PP+ +Y +++ + G EA ++F +M L P + + +++G C+ + A+
Sbjct: 696 FPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 755
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH----APNAITYTTI 177
+F +K G +N LI + K G+ ++ L D PN +TY +
Sbjct: 756 TIFETNEK-GCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIM 814
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + + E+ M++ Y +++ + K+GR E ++++ G+
Sbjct: 815 IDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGI 874
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ-----GFECDKYTHTILIDGLCKAGNI 292
+ D + Y+ +IN + KEG A +LLD+M + G + T L+ G K G +
Sbjct: 875 EPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEM 934
Query: 293 KGARLHLEYMNKIGF 307
+ A +E M ++ +
Sbjct: 935 EVAEKVVENMVRLKY 949
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 146/308 (47%), Gaps = 18/308 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
ML+ +C+ + +L+ M G P+ VTY ++I G ++ L+ + L DEM
Sbjct: 670 MLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLK 729
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD + Y +L+ +L + A +F+ G +A FN ++N + K T+
Sbjct: 730 GLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKG-CASSSAPFNALINWVFKFGKTELT 788
Query: 121 LRMFRGLQKHGF----VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
M L F P VTYNI+I LCK G L A+ + + + P ITYT+
Sbjct: 789 TDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTS 848
Query: 177 IM----KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
++ K R+ + + E+++A G D Y +I AF+K G +A ++QM
Sbjct: 849 LLNGYDKMGRRSEMFSVFDEVIAA----GIEPDNIMYSVIINAFLKEGMTTKALVLLDQM 904
Query: 233 -----VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
V DG +L I + L++ + K G++E A +++ M + + D T LI+ C
Sbjct: 905 FAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESC 964
Query: 288 KAGNIKGA 295
+ N + A
Sbjct: 965 ISSNQRMA 972
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 167/426 (39%), Gaps = 86/426 (20%)
Query: 57 MLEMGIP-PDVWSYNSLMHCLFQ-LGKPDEANRVFQDMICG------------------- 95
M+E P +VWS S++ CL + +GK D+ +F +I G
Sbjct: 123 MIERKWPVAEVWS--SIVRCLREFVGKSDDRVLLFGILIDGYIEKGFLDEAVFVFSSTKD 180
Query: 96 ---DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI--------- 143
DL P A N +L+ L K D +++G+ + V ++ +Y +LI
Sbjct: 181 LDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNV 240
Query: 144 ---------------------------------KGL--------------CKAGRLRTAR 156
KGL CK RL A+
Sbjct: 241 QLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAK 300
Query: 157 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 216
+L E+ G + + Y+ ++ + R ++ M G++ D Y I
Sbjct: 301 SLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVM 360
Query: 217 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
K G +++A + M+T GV +Y +LI + +E + Y LL E++K+
Sbjct: 361 SKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISP 420
Query: 277 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
YT+ + G+C +G++ GA ++ M G N+ Y ++ + + A+ V +
Sbjct: 421 YTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKE 480
Query: 337 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 392
M D+F Y+S++ L KAK++ A LL +++G + A + G +G
Sbjct: 481 MREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGE 540
Query: 393 RREAKK 398
A K
Sbjct: 541 FASADK 546
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 201/408 (49%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI++YC ++ +++ ++ + G PD++TY +LI G N + SL+ D ++
Sbjct: 89 ILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQ 148
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI D SY +L++ L ++G+ A R+ + + P +N +++GLCK++ +A
Sbjct: 149 GIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDA 208
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + + P +VTY LI G C G+L A +L E+ PN T+ T++
Sbjct: 209 FDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDG 268
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + +++ M ++G D F Y ++ + + +A + M GV D
Sbjct: 269 LCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCD 328
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ SY+ +I+ K L+ A L + M + D ++ LIDGLCK+G I A +++
Sbjct: 329 VHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVD 388
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M+ G N+ Y ++D L K ++D AI + + ++ + + +TY+ +V LCK
Sbjct: 389 EMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDG 448
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
RL A K+ L G + +++GL EA + SK+
Sbjct: 449 RLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKME 496
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 167/310 (53%), Gaps = 1/310 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C D + +LN M ++P+V T+N+L+ G + + + L+ M++ G
Sbjct: 230 LIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEG 289
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV++YN+LM F + + +A VF M +T ++++M++GL K + D A+
Sbjct: 290 VGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAM 349
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F G++ +P++V Y+ LI GLCK+GR+ +A + E+ D G PN ITYT+++
Sbjct: 350 DLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDAL 409
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + + +L +K +G + + Y ++ K GRL +A + ++ G +D+
Sbjct: 410 CKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDV 469
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC-KAGNIKGARLHLE 300
V+Y+ +IN CKE + A LL +ME +G D + +I+ K N K +L E
Sbjct: 470 VTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLRE 529
Query: 301 YMNKIGFDSN 310
++ + + N
Sbjct: 530 MIDCVDYKDN 539
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 183/368 (49%), Gaps = 4/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ +L ++ PDVV YN++I G ++ L+ + DL EM E
Sbjct: 160 LINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKR 219
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V +Y SL++ +G+ D+A + +M+ ++ P TFN +++GLCK A
Sbjct: 220 VFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAK 279
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K G P++ TYN L+ G A+ + + G + +Y+ ++
Sbjct: 280 SLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGL 339
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + +++ M+ + D Y ++I K GR+ A Y+++M G ++
Sbjct: 340 SKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNV 399
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y +LI+ CK +++ A LL +++ QG + + YT+ IL+DGLCK G + A+ +
Sbjct: 400 ITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQD 459
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G + ++ Y+ +++ L K+ D A+ + ME V D+ Y ++++ +
Sbjct: 460 LLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDM 519
Query: 358 LPSASKLL 365
A KLL
Sbjct: 520 NDKAEKLL 527
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 162/349 (46%), Gaps = 4/349 (1%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
NRM P ++ + ++ + + L M GI + + N L++
Sbjct: 37 FNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCH 96
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
L + + A VF ++ P T+ ++ GLC N +L L G + V+
Sbjct: 97 LRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVS 156
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
Y LI GLCK G+ A +L+++ P+ + Y TI+ +++ + ++ M
Sbjct: 157 YGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMF 216
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
K + Y ++I F +G+L +A + +MV V ++ ++NTL++ CKEGK+
Sbjct: 217 EKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMR 276
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A L+ M K+G D +T+ L+DG A+ M ++G ++ +Y+ ++
Sbjct: 277 EAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMI 336
Query: 319 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASK 363
L K +D A+++FE M + D YSS++ LCK+ R+ SA K
Sbjct: 337 SGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALK 385
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 141/321 (43%), Gaps = 42/321 (13%)
Query: 72 LMHCLFQ-LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
L H F L ++A F M+ P F +L L K ++ + +F+ ++ H
Sbjct: 19 LSHTHFHSLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELH 78
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G +T NILI C ++ +A + ++ G+ P+ IT
Sbjct: 79 GIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIIT----------------- 121
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
Y T+I G++KE+ ++ +++V+ G++LD VSY TLIN
Sbjct: 122 ------------------YTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLING 163
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDS 309
CK G+ A LL ++E + D + +IDGLCK ++ A L+ E K F
Sbjct: 164 LCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVF-P 222
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
N+ Y ++ G++D A + M +K + T++++V LCK ++ A L+
Sbjct: 223 NVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLV 282
Query: 366 LSCLKSGVRILKSAQKAVVDG 386
+K GV A++DG
Sbjct: 283 AVMMKEGVGPDVFTYNALMDG 303
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ + + G + DVVTY+ +I G + SL +L LL +M +
Sbjct: 439 ILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDK 498
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
G PD +Y ++++ F+ D+A ++ ++MI
Sbjct: 499 GCVPDAIAYETIINAFFEKDMNDKAEKLLREMI 531
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 74/185 (40%), Gaps = 4/185 (2%)
Query: 216 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
F + L +A D +M+ I+ + ++ K L ME G + +
Sbjct: 24 FHSLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSN 83
Query: 276 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
T ILI+ C I A + K+G+ ++ Y ++ L +G++ ++N +
Sbjct: 84 YITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHD 143
Query: 336 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ + D +Y ++++ LCK + A +LL R ++DGL
Sbjct: 144 RLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDK 203
Query: 392 CRREA 396
R+A
Sbjct: 204 LVRDA 208
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 194/418 (46%), Gaps = 29/418 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL------- 54
L+ AYC+ + Y +L +M G P V YN LI G L S++++
Sbjct: 17 LVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLP-SMEVIGLAERAY 75
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+EMLEMG+ + + + CL +GK ++A V ++M+ P ++T++ ++ LC
Sbjct: 76 NEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNA 135
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
+ A ++F+ ++++G P++ TY L+ CK G + AR E+ G APN +TY
Sbjct: 136 SKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTY 195
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
T ++ + RK EI M G + Y +I K G ++A +M
Sbjct: 196 TALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKN 255
Query: 235 DGVQL-----------------DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 277
D V + ++V+Y L++ CK K++ A LL+ M +G E ++
Sbjct: 256 DKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQI 315
Query: 278 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
+ LIDG CK G + A+ M G N+ Y+ ++D+L KD ++D A+ V M
Sbjct: 316 IYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKM 375
Query: 338 E----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ Y+ MV LCK + A +L+L + G A++DG +G
Sbjct: 376 LENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAG 433
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 180/410 (43%), Gaps = 56/410 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C + + + M+ GI+PDV TY +L+ + L+ + + DEM + G
Sbjct: 128 VIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDG 187
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +Y +L+H + K AN +F+ M+ P T+ +++G CK T+ A
Sbjct: 188 CAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKAC 247
Query: 122 RM-----------------FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 164
++ FR + P +VTY L+ GLCKA +++ AR +L+ +
Sbjct: 248 QIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSL 307
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
G PN I Y + I F K+G+L E
Sbjct: 308 EGCEPNQIIYDAL-----------------------------------IDGFCKVGKLDE 332
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A + +M+ G ++ +Y++LI+ K+ +L+ A +L +M + + +T ++D
Sbjct: 333 AQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVD 392
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 340
GLCK G A + M + G N+ Y ++D GK G++D + + + M K
Sbjct: 393 GLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAP 452
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
+ TY ++++ C A L A KLL ++ + V++G H
Sbjct: 453 NFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHE 502
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 177/410 (43%), Gaps = 72/410 (17%)
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR- 115
M+ G P +NSL+H + G A ++ + M+ P +NI++ G+C
Sbjct: 2 MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61
Query: 116 -------------------------------YT---------DNALRMFRGLQKHGFVPE 135
+T + A + R + GF+P+
Sbjct: 62 LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL---- 191
TY+ +I LC A ++ A + +E+ +G P+ TYTT++ +R K+GL
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLL-----DRFCKVGLIEQA 176
Query: 192 -EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
M++ G + Y +I A++K +L A + E M+++G +IV+Y LI+
Sbjct: 177 RNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDG 236
Query: 251 YCKEGKLEAAYLLLDEMEKQGF-----------------ECDKYTHTILIDGLCKAGNIK 293
+CK G+ E A + M+ E + T+ L+DGLCKA +K
Sbjct: 237 HCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVK 296
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
AR LE M+ G + N Y+ ++D K GK+D A VF M + +TYSS++
Sbjct: 297 EARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLI 356
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L K KRL A K+L L++ +VDGL G EA ++
Sbjct: 357 DKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRL 406
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 156/341 (45%), Gaps = 13/341 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+ +L M G P+ + Y++LI G + L + ++ +ML G
Sbjct: 285 LVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHG 344
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V++Y+SL+ LF+ + D A +V M+ P + M++GLCK TD A
Sbjct: 345 CSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAY 404
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ +++ G P +VTY +I G KAGR+ +L+ + G APN ITY ++ C
Sbjct: 405 RLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHC 464
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF-----VKIGRLKEATDYMEQMVTDG 236
++L MK+ + Y VI F +G L E ++ DG
Sbjct: 465 CAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGLLAELSE-------DG 517
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
+ Y LI+ + K G+LE A L +E+ + T+ LI+ L A + A
Sbjct: 518 SVPILPVYKLLIDNFIKAGRLEMALELHEELSSFS-AAYQNTYVSLIESLTLACKVDKAF 576
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M + GF L C++ L + GK + A+ + +S+
Sbjct: 577 KLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSI 617
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 189/457 (41%), Gaps = 57/457 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D +C+ + + M++ G +P+VVTY +LI + LS + ++ + ML G
Sbjct: 163 LLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNG 222
Query: 62 IPPDVWSYNSLM--HC-------------------------------------------- 75
P++ +Y +L+ HC
Sbjct: 223 CVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTY 282
Query: 76 ------LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
L + K EA + + M P ++ +++G CK D A +F +
Sbjct: 283 GALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLG 342
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
HG P + TY+ LI L K RL A +L ++ ++ APN + YT ++ + K
Sbjct: 343 HGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDE 402
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
++ M+ KG + Y +I F K GR+ + ++ M + G + ++Y LIN
Sbjct: 403 AYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLIN 462
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
C G L+ A+ LL+EM++ + + +I+G + + L +++ G
Sbjct: 463 HCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGF--SHEFVASLGLLAELSEDGSVP 520
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFE---SMEVKDSFTYSSMVHNLCKAKRLPSASKLLL 366
L Y ++D K G+++ A+ + E S TY S++ +L A ++ A KL
Sbjct: 521 ILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQNTYVSLIESLTLACKVDKAFKLYS 580
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ G S ++ GL G EA ++ I
Sbjct: 581 DMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSI 617
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 121/468 (25%), Positives = 204/468 (43%), Gaps = 77/468 (16%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAG----------------ATRNSLLSCSLD---- 52
DA + RM E G +PDV +YN+LI G T + +CS +
Sbjct: 147 DAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSY 206
Query: 53 ------------------LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 94
L DEM+ G PPDV +Y+SL+ L + ++A + Q M
Sbjct: 207 STIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFD 266
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
+ P T T+NIM+ G C + A+R+ + + G P++VTY +LI+ CK GR
Sbjct: 267 KGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAE 326
Query: 155 ARWILKELGDSGHAPNAITYTTIMK----------------------CCFRNRKYKL--- 189
AR + + G PN+ Y ++ F +R + +
Sbjct: 327 ARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILIC 386
Query: 190 ----------GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + M++ G D Y TVI KIGR+++A + QMV++G+
Sbjct: 387 AYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSP 446
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+I+S+ +LI+ C G+ + L EM +G D ++D LCK G + A+
Sbjct: 447 NIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFF 506
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKA 355
+ + IG N+ +YN ++D GK+D +I F+ M DS+TY+++++ K
Sbjct: 507 DMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKN 566
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
R+ A L + V+ ++ GL +G A+++ K+
Sbjct: 567 GRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKM 614
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 203/446 (45%), Gaps = 76/446 (17%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ + + IL M + G+ P+ TYN +I G L ++ LL +M G
Sbjct: 244 LIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSG 303
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG----------- 110
+ PDV +Y L+ ++G+ EA VF M+ P + ++I+L+G
Sbjct: 304 LQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVR 363
Query: 111 ---------------------LC---KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+C K+ D A+ F ++++G P++V+Y+ +I L
Sbjct: 364 DLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHIL 423
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK GR+ A + ++ G +PN I++T+++ ++K E+ M +G D
Sbjct: 424 CKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDA 483
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
T++ K GR+ EA D+ + ++ GV+ ++VSYNTLI+ YC GK++ + D
Sbjct: 484 IFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDR 543
Query: 267 MEKQGFECDKYTH-----------------------------------TILIDGLCKAGN 291
M G D +T+ I++ GL +AG
Sbjct: 544 MVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGR 603
Query: 292 IKGAR-LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 346
I AR L+++ +++ G +E YN ++ L ++ +D A+ +FE + K D +T++
Sbjct: 604 IVAARELYMKMVDR-GTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFN 662
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSG 372
+++ L K R+ A L + + G
Sbjct: 663 IVINALLKVGRIDEAKSLFSAMVLRG 688
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 165/338 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI AY + + D T MR+ G+ PDVV+Y+++I + + ++ ++M+
Sbjct: 383 ILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSE 442
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P++ S+ SL+H L +G+ + + +MI + P N +++ LCK A
Sbjct: 443 GLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEA 502
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
F + G P +V+YN LI G C G++ + + G P++ TY ++
Sbjct: 503 QDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNG 562
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+N + + L + M RK F ++ + GR+ A + +MV G QL
Sbjct: 563 YFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLR 622
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I +YNT++ C+ ++ A + +++ + FE D +T I+I+ L K G I A+
Sbjct: 623 IETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFS 682
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
M G ++ Y+ ++ ++G ++ + ++F SME
Sbjct: 683 AMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSME 720
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 150/295 (50%), Gaps = 4/295 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
+ + ++NR GI PD + N+++ + + + D D ++ +G+ P+V SYN+L
Sbjct: 469 ELAFEMINR----GIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTL 524
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ +GK DE+ + F M+ L P + T+N +LNG KN ++AL ++R + +
Sbjct: 525 IDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDV 584
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+T NI++ GL +AGR+ AR + ++ D G TY T++ N L
Sbjct: 585 KFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALR 644
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ ++ K + D + + VI A +K+GR+ EA MV G +++Y+ +I
Sbjct: 645 MFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRI 704
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
+EG LE + L MEK G D + ++I L + G+++ A +L +++ F
Sbjct: 705 EEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNF 759
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 137/303 (45%), Gaps = 43/303 (14%)
Query: 102 ATFNIMLNGLCKNRYTDNALRM-FRGLQKHGFVPELVTYNILIKGLC------------- 147
T N ++ GLC + TD+A+ M FR + + G+ P++ +YN LIKGLC
Sbjct: 130 VTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLL 189
Query: 148 -------------------------KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
K G + A ++ E+ G P+ +TY++++
Sbjct: 190 HMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLC 249
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ + IL M KG + Y +I + +G+L+EA +++M G+Q D+V
Sbjct: 250 KAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVV 309
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
+Y LI YCK G+ A + D M ++G + + + IL+ G G + R L+ M
Sbjct: 310 TYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLM 369
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 358
+ G A+N ++ K G +D A+ F M D +YS+++H LCK R+
Sbjct: 370 IRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRV 429
Query: 359 PSA 361
A
Sbjct: 430 EDA 432
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 150/342 (43%), Gaps = 18/342 (5%)
Query: 50 SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE-------ANRVFQDMICGDLTPCTA 102
+L+L DE+L P V ++NS++ + + A +F M + A
Sbjct: 33 ALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSGVNMMAA 92
Query: 103 T---FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR-WI 158
I++ C D A F K G+ + VT N LIKGLC R A +
Sbjct: 93 NRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMV 152
Query: 159 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY---TFDGFGYCTVIAA 215
+ + + G+ P+ +Y ++K +K + LE+L M G + + Y T+I
Sbjct: 153 FRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDG 212
Query: 216 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
F K G + +A ++M+ G D+V+Y++LI+ CK + A +L M +G +
Sbjct: 213 FFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPN 272
Query: 276 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
T+ I+I G C G ++ A L+ M+ G ++ Y ++ K G+ A +VF+
Sbjct: 273 TRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFD 332
Query: 336 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
SM K +S Y ++H L LL ++ G+
Sbjct: 333 SMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGI 374
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 12 FDAGYTILNR-----MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
F AG + R M + G + TYN+++ G NS + +L + +++ DV
Sbjct: 599 FQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDV 658
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
W++N +++ L ++G+ DEA +F M+ P T+++M+ + + + +F
Sbjct: 659 WTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLS 718
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
++K+G + N++I+ L + G +R A L ++ + + A T ++ +K
Sbjct: 719 MEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEASTAALLIPIV-SEKK 777
Query: 187 YKLGLEIL 194
Y+ ++ L
Sbjct: 778 YQKEVKFL 785
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 202/433 (46%), Gaps = 43/433 (9%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYN 70
DA +L RM E G +PDV +Y++L+ G + +L+ M E G PPDV SY+
Sbjct: 66 DAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYS 125
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+++H F+ G +A +F M+ + P T N +++GLCK + D A + + +
Sbjct: 126 TVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDE 185
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
+P TYN LI G +G+ A ILKE+ G PN +TY ++ C ++ +
Sbjct: 186 HIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEA 245
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
EI ++M + G D Y +++ + G L E + + MV +G++ + +++ I
Sbjct: 246 REIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYA 305
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI------------------ 292
YCK G+L+ A L +M++ GF D T+T +IDGLCK G +
Sbjct: 306 YCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPN 365
Query: 293 ------------------KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
K L E M++ G ++ + ++DRL K+GK+ A +F
Sbjct: 366 IITFTTLIHGFSMYGKWEKAEELFYEMMDR-GIPPDVTIFTAMIDRLFKEGKVTEAQKLF 424
Query: 335 ESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
+ M + +Y++M+H A + KLL L G++ ++DG+
Sbjct: 425 DLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSM 484
Query: 391 GCRREAKKIQSKI 403
G + + ++ I
Sbjct: 485 GLKPDVDTCKTLI 497
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 166/371 (44%), Gaps = 51/371 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ + D +L +M + I P+ TYNSLI G + + ++ +L EM G
Sbjct: 162 VIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDG 221
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML------------- 108
P+V +YN L+ CL + G EA +F MI P T+ +L
Sbjct: 222 QRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMN 281
Query: 109 --------NGLCKNRYT--------------DNALRMFRGLQKHGFVPELVTYNILIKGL 146
NG+ N +T D A F +Q+ GF+P++VTY +I GL
Sbjct: 282 NVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGL 341
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK GRL A ++ D G +PN IT+TT++ K++ E+ M +G D
Sbjct: 342 CKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDV 401
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ +I K G++ EA + M G + ++VSYNT+I+ Y G++ LLD+
Sbjct: 402 TIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDD 461
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M G + T L+DG M +G +++ ++D +DG+
Sbjct: 462 MLLIGLKPTAVTFNTLLDG----------------MVSMGLKPDVDTCKTLIDSCCEDGR 505
Query: 327 IDHAINVFESM 337
I+ + +F M
Sbjct: 506 IEDILTLFREM 516
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 133/294 (45%), Gaps = 18/294 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG-ATRNSLLSCSLDLLDEMLE 59
MLID C+ I N M ++G PD TY SL+ G AT +L+ + ++ D M++
Sbjct: 231 MLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMN-NVKDLMVQ 289
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G+ + +++ ++ + G+ DEA+ F M P T+ +++GLCK D+
Sbjct: 290 NGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDD 349
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+ F + G P ++T+ LI G G+ A + E+ D G P+ +T ++
Sbjct: 350 AMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMID 409
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
F+ K ++ M R G + Y T+I + G + E ++ M+ G++
Sbjct: 410 RLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKP 469
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
V++NT LLD M G + D T LID C+ G I+
Sbjct: 470 TAVTFNT----------------LLDGMVSMGLKPDVDTCKTLIDSCCEDGRIE 507
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 144/333 (43%), Gaps = 7/333 (2%)
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ ++ L+ C G + +I L F +L LC + T +A+
Sbjct: 9 VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAM 68
Query: 122 RM-FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH--APNAITYTTIM 178
+ R + + G P++ +Y+ L+KGLC + A ++ + + G P+ ++Y+T++
Sbjct: 69 NIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVI 128
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
F+ + M G + +VI K+ + +A ++QM+ + +
Sbjct: 129 HGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIM 188
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+ +YN+LI+ Y G+ A +L EM + G + T+ +LID LCK+G AR
Sbjct: 189 PNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREI 248
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCK 354
M + G + Y ++ +G + NV + M + T+S ++ CK
Sbjct: 249 FNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCK 308
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
RL AS + + G V+DGL
Sbjct: 309 CGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGL 341
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 202/409 (49%), Gaps = 4/409 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D C+ F+ Y + + G +P+ VTY SLI G + + + L + ML+
Sbjct: 431 IMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDT 490
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G + Y SL+ F G+ ++ +++F++M P N ++ + K +
Sbjct: 491 GHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKG 550
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F ++ +GF+P++ +Y+ILI GL KAG+ R I + G A +A Y ++
Sbjct: 551 RAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDG 610
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K E+L MK K Y ++I KI RL EA E+ + G++L+
Sbjct: 611 FCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELN 670
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++ Y++LI+ + K G+++ AYL+L+EM K+G + YT L+D L KA I A + +
Sbjct: 671 VIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQ 730
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M ++ N Y+ +++ L + K + A ++ M+ V + TY++M+ L K
Sbjct: 731 SMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVG 790
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
+ A L +G ++ A+++G+ H+ EA + + R+
Sbjct: 791 NITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRL 839
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 192/409 (46%), Gaps = 44/409 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I Y F+ Y +L++++E G P VV++NS++ + + +L L + M +
Sbjct: 328 MIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAM-KKD 386
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +YN ++ L GK +EA + +M L P T NIM++ LCK + + A
Sbjct: 387 AEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAY 446
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
MF + G P VTY LI GL K G + A + + + D+GH N + YT++++
Sbjct: 447 EMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNF 506
Query: 182 FRNRKYKLGLEILSAMKRKGYTFD----------------------------GFG----- 208
F + + + G +I M R+G D G+G
Sbjct: 507 FMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDV 566
Query: 209 --YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I K G+ +E + M G LD +YN +++ +CK GKL+ AY +L+E
Sbjct: 567 RSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEE 626
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+ + T+ +IDGL K + A + E G + N+ Y+ ++D GK G+
Sbjct: 627 MKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGR 686
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
ID A + E M K + +T++S++ L KA+ + A L C +S
Sbjct: 687 IDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEA----LICFQS 731
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 195/448 (43%), Gaps = 40/448 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI A + + +L +M+E G V + +L+ R + +L L+DE+
Sbjct: 187 VLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGS 246
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+ YN + C + G D A + F ++ L P ++ M+ LCK A
Sbjct: 247 CLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEA 306
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F ++ VP YN +I G AG+ A +L +L + G P+ +++ +I+ C
Sbjct: 307 EELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTC 366
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ RK L + AMK+ + Y +I G+++EA ++M G+ +
Sbjct: 367 LGKKRKVDEALTLFEAMKKDAEP-NSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPN 425
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++ N +++ CK K E AY + + ++G + T+ LIDGL K GN+ A E
Sbjct: 426 LLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFE 485
Query: 301 YMNKIGFDSNLEAY-----------------------------------NCIVDRLGKDG 325
M G ++N Y N +D + K G
Sbjct: 486 NMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAG 545
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
++ +FE ++ + D +YS ++H L KA + S + + + G + A
Sbjct: 546 DVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYN 605
Query: 382 AVVDGLRHSGCRREAKKIQSKIRMAKIS 409
AVVDG SG +A ++ ++++ ++
Sbjct: 606 AVVDGFCKSGKLDKAYEVLEEMKVKRVP 633
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 162/355 (45%), Gaps = 5/355 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + D ++ MR P Y LI +L+LL +M E+G
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
V + +L+ L + G+ + A + ++ L P +N+ ++ K D A
Sbjct: 213 YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 272
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ F L+ G P+ V+Y +I LCKAGRL A + ++ P A Y T++
Sbjct: 273 KFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGY 332
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+++ ++L +K +G + +++ K ++ EA E M D + +
Sbjct: 333 GSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA-EPNS 391
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN +I++ C GK+E AY++ DEME G + T I++D LCKA + A E
Sbjct: 392 STYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFET 451
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNL 352
++ G + N Y ++D LGK G +D A +FE+M + Y+S++ N
Sbjct: 452 ASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNF 506
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 168/380 (44%), Gaps = 44/380 (11%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEM--LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 90
YN+++ + + L+ +L+EM L G+P + L+ L + + D+A RV
Sbjct: 116 AYNAVLPFLSHD--LAAMEKVLEEMSVLGYGVPNPACA--DLVSALVRTRRLDDAERVIA 171
Query: 91 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 150
M P + + +++ + + R + AL + R +Q+ G+ + + L++ L + G
Sbjct: 172 AMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREG 231
Query: 151 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
R+ A ++ E+ S P+ + Y + C + + + +K +G D Y
Sbjct: 232 RVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYT 291
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
++I K GRL EA + QM T+ +YNT+I Y G+ E AY LLD+++++
Sbjct: 292 SMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKER 351
Query: 271 G----------------------------------FECDKYTHTILIDGLCKAGNIKGAR 296
G E + T+ I+ID LC AG ++ A
Sbjct: 352 GCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAY 411
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
+ + M G NL N +VDRL K K + A +FE+ + +S TY S++ L
Sbjct: 412 MIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGL 471
Query: 353 CKAKRLPSASKLLLSCLKSG 372
K + A +L + L +G
Sbjct: 472 GKKGNVDDAYRLFENMLDTG 491
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 162/362 (44%), Gaps = 5/362 (1%)
Query: 2 LIDAY--CQFVSFDA--GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 57
L++ Y C F + D G I ++ G PDV +Y+ LI G T+ + + M
Sbjct: 533 LLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAM 592
Query: 58 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
+ G D +YN+++ + GK D+A V ++M + P AT+ +++GL K
Sbjct: 593 KQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRL 652
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
D A +F + G ++ Y+ LI G K GR+ A IL+E+ G PN T+ ++
Sbjct: 653 DEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 712
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
M + + L +MK + + + Y +I ++ + +A + ++M G+
Sbjct: 713 MDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGL 772
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
++V+Y T+I K G + A L + + G D + LI+G+ A A
Sbjct: 773 VPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYH 832
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV-FESMEVKDSFTYSSMVHNLCKAK 356
E G N++A ++D L K ++ A V F V+ F ++ + L A
Sbjct: 833 VFEETRLKGCRINVKACISLLDALNKAECLEQAAVVGFGENTVRHFFQWTEGLDLLLSAG 892
Query: 357 RL 358
+L
Sbjct: 893 QL 894
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 172/369 (46%), Gaps = 4/369 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ D G+ N M G+ P+ TY SLI G L+DEM+
Sbjct: 190 IVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRR 249
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ V+ + L+ L + G EA +F +M+ P T ++ G C D A
Sbjct: 250 GLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMA 309
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + + GF ++ TYN+ I G CK GR+R A + E+ G PN +TY +++ C
Sbjct: 310 RELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDC 369
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + EI+ M R G T D C ++ K RL +A Q+V G+ D
Sbjct: 370 LCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPD 429
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ SY LI+ C ++ A LL +M + T++ LIDGLC++G I A L
Sbjct: 430 VWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLN 489
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M+ G + Y+ ++D L K +D A+ +F M + D Y+ M+ CK++
Sbjct: 490 EMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSE 549
Query: 357 RLPSASKLL 365
R+ A L
Sbjct: 550 RIDEAINLF 558
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 157/325 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ + + M G P++VT +L+ G + + +L D + E
Sbjct: 260 VLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEW 319
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G DVW+YN +H ++G+ +A RVF +M + P T+N +++ LCK A
Sbjct: 320 GFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGA 379
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + + G P++VT IL+ GLCK+ RL A + +L +SG P+ +YT ++
Sbjct: 380 WEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHG 439
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C +R+ + +L M K Y +I + GR+ A + +M G D
Sbjct: 440 CCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPD 499
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++Y+ L++ K+ L+ A L ++M K+G E D +TI+IDG CK+ I A
Sbjct: 500 TITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFR 559
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDG 325
M+ ++ Y + + + K G
Sbjct: 560 EMHMKNLVPDIVTYTILFNAVFKSG 584
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 149/290 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ YC + D + + + E G DV TYN I G + + ++ + DEM G
Sbjct: 296 LMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREG 355
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++ +YNSL+ CL + G+ A + + M LTP T I+L+GLCK++ D A+
Sbjct: 356 VVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAI 415
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F L + G P++ +Y ILI G C + R+ A +L+++ P+ +TY+ ++
Sbjct: 416 LLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGL 475
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ + +L+ M KG D Y ++ A K L EA QM+ G++ D+
Sbjct: 476 CRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDV 535
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
+ Y +I+ YCK +++ A L EM + D T+TIL + + K+G+
Sbjct: 536 MCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGS 585
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 191/405 (47%), Gaps = 53/405 (13%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
VSF ++I ++ + G D V N+++ G N + +L+ DE++ G + SY
Sbjct: 88 VSFS--FSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSY 145
Query: 70 NSLMHCLFQLGKPDEANRVFQ--------------------------DMIC--GDLTPCT 101
L++ L + G+ +EA + + D +C G +
Sbjct: 146 GILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGF 205
Query: 102 ATFNIML-NGLCKNRYTDNALRMFRG-------LQKHGFVPELV---------TYNILIK 144
+N M+ NG+C N +T +L RG L+ G V E++ + +LI
Sbjct: 206 EFYNEMMGNGVCPNEFTYGSL--IRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLID 263
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
GLCK G L AR + E+ + G+ PN +T T +M + E+ A+ G+
Sbjct: 264 GLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKR 323
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D + Y I + K+GR+++A ++M +GV +IV+YN+LI+ CK G++ A+ ++
Sbjct: 324 DVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIV 383
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
M + G D T IL+DGLCK+ + A L + + G ++ +Y ++
Sbjct: 384 KTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTS 443
Query: 325 GKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLL 365
++ A+N+ M +K+ TYS ++ LC++ R+ +A +LL
Sbjct: 444 RRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLL 488
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 145/311 (46%), Gaps = 12/311 (3%)
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
C F LG + +F ++ T N +L GLC N AL + +GF
Sbjct: 81 CFFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSL 140
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP--------NAITYTTIMKCCFRNRK 186
V+Y ILI GLC+ GR+ A +L+ + N + Y+ ++ C RN
Sbjct: 141 NEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGF 200
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
G E + M G + F Y ++I +G+ E +++M+ G+ + + +
Sbjct: 201 VDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTV 260
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
LI+ CK G L A + DEM +G+E + T T L+ G C GN+ AR + + + G
Sbjct: 261 LIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWG 320
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSAS 362
F ++ YN + K G++ A+ VF+ M V + TY+S++ LCKA + A
Sbjct: 321 FKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAW 380
Query: 363 KLLLSCLKSGV 373
+++ + +SG+
Sbjct: 381 EIVKTMHRSGL 391
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 166/339 (48%), Gaps = 12/339 (3%)
Query: 47 LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 106
+S S + ++L+ G D + N+++ L G +A +++ + ++ I
Sbjct: 88 VSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGI 147
Query: 107 MLNGLCKNRYTDNALRMFRGLQKH------GFVPE--LVTYNILIKGLCKAGRLRTARWI 158
++NGLC+N + A+ + R ++K GF + +V Y+I+I LC+ G +
Sbjct: 148 LINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEF 207
Query: 159 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 218
E+ +G PN TY ++++ K+ G ++ M R+G + + +I K
Sbjct: 208 YNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCK 267
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
G L EA + ++MV G + +IV+ L+ YC +G ++ A L D + + GF+ D +T
Sbjct: 268 NGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWT 327
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+ + I G CK G ++ A + M + G N+ YN ++D L K G++ A + ++M
Sbjct: 328 YNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMH 387
Query: 339 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
D T ++ LCK+KRL A L ++SG+
Sbjct: 388 RSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGL 426
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 90/224 (40%), Gaps = 31/224 (13%)
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
C F I + ++GY D TV+ G + +A ++ +++V +G L
Sbjct: 81 CFFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSL 140
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ VSY LIN C+ G++ A LL +EK DG GN+
Sbjct: 141 NEVSYGILINGLCENGRVNEAVNLLRMIEK--------EKEKEKDGFFVKGNVV------ 186
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
Y+ ++D L ++G +D + M + FTY S++ LC
Sbjct: 187 -------------MYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGV 233
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ L+ ++ G+ + ++DGL +G EA+++
Sbjct: 234 GKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREM 277
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 188/378 (49%), Gaps = 7/378 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A C +L M+ +G+ PDVVTY +LI G + + +++LL EM E G
Sbjct: 119 LMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESG 178
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V Y+ L+ + G+ + ++VF++M + P + +++ LC+ A
Sbjct: 179 IEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKAT 238
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + + G P +VTYN+LI +CK G ++ A + + + G A +A+TY T++
Sbjct: 239 QVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGL 298
Query: 182 FRNRKYKLGLEILSAMKRKGYTF---DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ + +L M G T + + +VI K GR+++A + M +G
Sbjct: 299 SGVLEMDEAMGLLEEMIH-GETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCA 357
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
++V++N LI + K++ A L+DEM G E D +T++ILI+G CK + A
Sbjct: 358 CNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESL 417
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---DSFTYSSMVHNLCKA 355
L M + G + L Y ++ L + G ++ A N F+ M D YS+M+H C+
Sbjct: 418 LSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKLDVVAYSTMIHGACRL 477
Query: 356 KRLPSASKLLLSCLKSGV 373
+ SA + L L G+
Sbjct: 478 RDRKSAEEFLKHMLDEGL 495
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 188/360 (52%), Gaps = 11/360 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID+ C+ ++++M E G+ P+VVTYN LI + + ++ L + MLE G
Sbjct: 224 LIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKG 283
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD--LTPCTATFNIMLNGLCKNRYTDN 119
+ D +YN+L+ L + + DEA + ++MI G+ + P TFN +++GLCK
Sbjct: 284 VALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQ 343
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A ++ + ++G LVT+N+LI GL + +++ A ++ E+ SG P++ TY+ ++
Sbjct: 344 AFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILIN 403
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + +LS M+R G + Y ++AA + G +++A ++ ++M + +L
Sbjct: 404 GFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKN-CKL 462
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+V+Y+T+I+ C+ ++A L M +G D T+++LI+ +G++ A L
Sbjct: 463 DVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVL 522
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD--------SFTYSSMVHN 351
+ M GF ++ ++ ++ G G + + + M KD S Y+ +V N
Sbjct: 523 KQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTCLVAN 582
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 199/412 (48%), Gaps = 16/412 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C D +L M E+GI P+VV Y+ L+ G + C + +EM G
Sbjct: 154 LIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRG 213
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV Y L+ L + GK +A +V M+ L P T+N+++N +CK A+
Sbjct: 214 IEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAM 273
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL--GDSGHAPNAITYTTIMK 179
+ + + G + VTYN LI GL + A +L+E+ G++ PN +T+ +++
Sbjct: 274 SLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIH 333
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + + ++ M G + + +I +++ ++K+A + M++M + G++
Sbjct: 334 GLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEP 393
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D +Y+ LIN +CK +++ A LL +M + G E + + L+ LC+ G ++ AR
Sbjct: 394 DSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFF 453
Query: 300 EYMNK------IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLC 353
+ M+K + + + + + DR + + H ++ E + + DS TYS +++
Sbjct: 454 DEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLD--EGL-IPDSVTYSMLINMFA 510
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL-RHSGCRREAKKIQSKIR 404
+ L +A ++L SG AV D L + G + + +K+ IR
Sbjct: 511 NSGDLGAAERVLKQMTASGF----VPDVAVFDSLIKGYGAKGDTEKVLELIR 558
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 168/351 (47%), Gaps = 8/351 (2%)
Query: 30 DVVTYNSLIAGATRNS-LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
D V+YN+++A R L +L LL M P V SY +LM L + +A +
Sbjct: 77 DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAV-SYTTLMRALCAERRTGQAVGL 135
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
+DM + P T+ ++ GLC D A+ + R + + G P +V Y+ L++G CK
Sbjct: 136 LRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCK 195
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
AGR + +E+ G P+ + YT ++ R K K +++ M +G +
Sbjct: 196 AGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVT 255
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM- 267
Y +I + K G +KEA M+ GV LD V+YNTLI +++ A LL+EM
Sbjct: 256 YNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMI 315
Query: 268 -EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
+ E + T +I GLCK G ++ A + M + G NL +N ++ L + K
Sbjct: 316 HGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHK 375
Query: 327 IDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ A+ + + M DSFTYS +++ CK ++ A LL + G+
Sbjct: 376 VKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGI 426
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 176/365 (48%), Gaps = 16/365 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-- 58
+LI++ C+ S ++ N M E G++ D VTYN+LI G + + ++ LL+EM+
Sbjct: 258 VLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHG 317
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT-ATFNIMLNGLCKNRYT 117
E + P+V ++NS++H L + G+ +A +V +DM+ + C TFN+++ GL +
Sbjct: 318 ETMVEPNVVTFNSVIHGLCKTGRMRQAFQV-RDMMAENGCACNLVTFNLLIGGLLRVHKV 376
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
A+ + + G P+ TY+ILI G CK ++ A +L ++ G P + Y +
Sbjct: 377 KKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPL 436
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + M K D Y T+I ++ K A ++++ M+ +G+
Sbjct: 437 LAALCEQGMMEQARNFFDEM-HKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGL 495
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
D V+Y+ LIN++ G L AA +L +M GF D LI G G+ +
Sbjct: 496 IPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLE 555
Query: 298 HLEYMNK--IGFDSNLEA--YNCIVDRLGKDGK-IDHAINVFESM----EVKDSFTYSSM 348
+ M I DS + + Y C+V +GK + ++ F++ V S ++M
Sbjct: 556 LIREMTAKDIALDSKIISTIYTCLVA--NNEGKALLQSVPGFDTEVSKGAVISSHELTNM 613
Query: 349 VHNLC 353
+H LC
Sbjct: 614 LHKLC 618
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 133/274 (48%), Gaps = 6/274 (2%)
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
V + V+YN ++ LC+ G A L + P A++YTT+M+ R+ +
Sbjct: 75 VRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVG 134
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+L M+ G D Y T+I + +A + + +M G++ ++V Y+ L+ YC
Sbjct: 135 LLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYC 194
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K G+ E + +EM +G E D +T LID LC+ G +K A ++ M + G + N+
Sbjct: 195 KAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVV 254
Query: 313 AYNCIVDRLGKDGKIDHAI----NVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
YN +++ + K+G + A+ N+ E D+ TY++++ L + A LL
Sbjct: 255 TYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEM 314
Query: 369 LKSGVRILKSAQ--KAVVDGLRHSGCRREAKKIQ 400
+ + + +V+ GL +G R+A +++
Sbjct: 315 IHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVR 348
>gi|255544732|ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547335|gb|EEF48830.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 567
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 208/412 (50%), Gaps = 7/412 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ + ++ +M ++G + VTYN+L+ G + L+ SL LD +++ G
Sbjct: 138 LVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKG 197
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ ++Y+SL+ ++ +EA R+ ++I P ++N++L GLCK + A+
Sbjct: 198 LVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAI 257
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+F+ L GF P +V+YNIL++ LC GR A +L E+ +P+ +TY ++
Sbjct: 258 RLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGSL 317
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + L+++ M + Y +IA K G+++ + ++QM+ +
Sbjct: 318 AFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVNCLDQMIFGRCSPNE 377
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++N I + C EGK++ A+ L+ + KQ Y + + LCK GN A L L
Sbjct: 378 GTFNA-IAVLCYEGKVQEAFSLIQSLGNKQNSSIHDYYKGV-VSCLCKKGNTYPAFLLLY 435
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
M K GF + Y+ ++ L +G + A+ +F+ +E D +++++ CK+
Sbjct: 436 EMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPDIDNFNALILGFCKSH 495
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
R + ++ ++ G ++ +V+G+ H + A ++ ++ + ++
Sbjct: 496 RTDLSLEVFEMMIEKGYTPSETTYTILVEGIIHEEEKELAAEVLRELHLRQV 547
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 161/333 (48%), Gaps = 6/333 (1%)
Query: 11 SFDAGYTILNRMREAGISP--DVVTYNSLIAGAT----RNSLLSCSLDLLDEMLEMGIPP 64
S + +T + + ISP V+T + +G R+ +S + L+ +++ G P
Sbjct: 36 SLNKDFTRVLASTQITISPKDSVITLPNWRSGKNDQRNRDMRISDAFFHLEHIVKNGHKP 95
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 124
DV L++ L + K +A RV + MI + P A++ ++N LCK A+++
Sbjct: 96 DVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAASYTFLVNHLCKRGNVGYAMQLV 155
Query: 125 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
++ G+ VTYN L+KGLC G L + L L G PNA TY+++++ ++
Sbjct: 156 EKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYKE 215
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
R + +L + KG + Y ++ K GR++EA + + + G ++VSY
Sbjct: 216 RGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSY 275
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
N L+ C EG+ E A LL EM + T+ ILI L G I+ A ++ M
Sbjct: 276 NILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMM 335
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
F +YN I+ RL K+GK++ +N + M
Sbjct: 336 GPFKPTATSYNPIIARLCKEGKVEAVVNCLDQM 368
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 136/287 (47%), Gaps = 3/287 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C+ + + + G SP+VV+YN L+ + +LL EM
Sbjct: 242 VLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGR 301
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P + +YN L+ L GK ++A +V +M+ G P ++N ++ LCK +
Sbjct: 302 ERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAV 361
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + P T+N I LC G+++ A +++ LG+ ++ Y ++ C
Sbjct: 362 VNCLDQMIFGRCSPNEGTFNA-IAVLCYEGKVQEAFSLIQSLGNKQNSSIHDYYKGVVSC 420
Query: 181 -CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
C + Y L +L M + G+T D + Y ++I G L EA + + + D +
Sbjct: 421 LCKKGNTYPAFL-LLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRP 479
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
DI ++N LI +CK + + + + + M ++G+ + T+TIL++G+
Sbjct: 480 DIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVEGI 526
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 123/241 (51%), Gaps = 4/241 (1%)
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
K+G P++V L+ LCK+ +++ A +++ + G P+A +YT ++ +
Sbjct: 90 KNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAASYTFLVNHLCKRGNVG 149
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
++++ M+ GY + Y T++ G L ++ ++++++ G+ + +Y++L+
Sbjct: 150 YAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLL 209
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
KE + A LLDE+ +G + + ++ +L+ GLCK G I+ A + + GF
Sbjct: 210 EAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFS 269
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKL 364
N+ +YN ++ L +G+ + A + M ++ TY+ ++ +L ++ A ++
Sbjct: 270 PNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQV 329
Query: 365 L 365
+
Sbjct: 330 I 330
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 108/219 (49%), Gaps = 4/219 (1%)
Query: 151 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
R+ A + L+ + +GH P+ + T ++ ++ K K + ++ M G D Y
Sbjct: 77 RISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAASYT 136
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
++ K G + A +E+M G + V+YNTL+ C G L + LD + ++
Sbjct: 137 FLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQK 196
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
G + +T++ L++ K + A L+ + G NL +YN ++ L K+G+I+ A
Sbjct: 197 GLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEA 256
Query: 331 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
I +F+++ K + +Y+ ++ +LC R A++LL
Sbjct: 257 IRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELL 295
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 102/251 (40%), Gaps = 34/251 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ + C ++ +L M SP +VTYN LI + + +L ++DEM+
Sbjct: 277 ILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMMG 336
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM------------- 107
P SYN ++ L + GK + MI G +P TFN +
Sbjct: 337 PFKPTATSYNPIIARLCKEGKVEAVVNCLDQMIFGRCSPNEGTFNAIAVLCYEGKVQEAF 396
Query: 108 ---------------------LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
++ LCK T A + + K+GF P+ TY+ LI+GL
Sbjct: 397 SLIQSLGNKQNSSIHDYYKGVVSCLCKKGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGL 456
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C G L A I K L + + P+ + ++ ++ + L LE+ M KGYT
Sbjct: 457 CIEGMLYEAMEIFKLLEEDHYRPDIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSE 516
Query: 207 FGYCTVIAAFV 217
Y ++ +
Sbjct: 517 TTYTILVEGII 527
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
++ ++ A+ L+ + K G + D T L+ LCK+ +K A +E M G +
Sbjct: 74 RDMRISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAA 133
Query: 313 AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
+Y +V+ L K G + +A+ + E ME ++ TY+++V LC L + + L
Sbjct: 134 SYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRL 193
Query: 369 LKSGV 373
++ G+
Sbjct: 194 MQKGL 198
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 180/374 (48%), Gaps = 15/374 (4%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
+ + M+E I PD+VTYN +I G + S + LL EMLE I PDV ++++L++
Sbjct: 272 AHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALIN 331
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
+ GK EA ++ +M+ + P T T++ M++G CK D A MF G P
Sbjct: 332 AFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSP 391
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
+++T+N LI G C+A R+ +L E+ ++G N ITYTT++ + ++L
Sbjct: 392 DIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLL 451
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT-----------DGVQLDIVS 243
M G + T++ G+LK+A + + M +GV+ D+ +
Sbjct: 452 QEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQT 511
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
YN LI EGK A L +EM +G D T++ +IDGLCK + A + M
Sbjct: 512 YNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 571
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLP 359
F ++ +N ++ K G +D + +F M V D+ TY ++++ K +
Sbjct: 572 SKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNID 631
Query: 360 SASKLLLSCLKSGV 373
A + + SGV
Sbjct: 632 GALDIFQEMISSGV 645
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 187/388 (48%), Gaps = 16/388 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++D C+ + +L +M E I P+VV YN++I G ++ S + +L EM E
Sbjct: 223 IVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEK 282
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PD+ +YN +++ G+ +A ++ Q+M+ + P TF+ ++N K A
Sbjct: 283 EIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEA 342
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + +P VTY+ +I G CK RL A + G +P+ IT+ T++
Sbjct: 343 EELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAG 402
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R ++ G+++L M G + Y T+I F ++G L A D +++M++ GV +
Sbjct: 403 YCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPN 462
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEK-----------QGFECDKYTHTILIDGLCKA 289
+V+ NTL++ C GKL+ A + M+K G E D T+ ILI GL
Sbjct: 463 VVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINE 522
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 345
G A E M G + Y+ ++D L K ++D A +F+SM K D T+
Sbjct: 523 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTF 582
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGV 373
++++ CKA + +L + G+
Sbjct: 583 NTLITGYCKAGMVDDGLELFCEMGQRGI 610
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 192/453 (42%), Gaps = 90/453 (19%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C + ++ + G P VVT+N+L+ G +S +LDL +M +
Sbjct: 121 ILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK- 179
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+V ++ +LM+ L + G+ EA + M+ L P T+ +++G+CK T +A
Sbjct: 180 ---PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSA 236
Query: 121 LRMFR--------------------GLQKHG----------------FVPELVTYNILIK 144
L + R GL K G P++VTYN +I
Sbjct: 237 LNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMIN 296
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
G C +GR A +L+E+ + P+ +T++ ++ + K+ E+ M +
Sbjct: 297 GFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIP 356
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
Y ++I F K RL A T G DI+++NTLI YC+ +++ LL
Sbjct: 357 STVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLL 416
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
EM + G + T+T LI G C+ G++ A+ L+ M G N+ N ++D L +
Sbjct: 417 HEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDN 476
Query: 325 GKIDHAINVFESME---------------------------------------------- 338
GK+ A+ +F++M+
Sbjct: 477 GKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMP 536
Query: 339 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
V D+ TYSSM+ LCK RL A+++ S
Sbjct: 537 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS 569
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 151/310 (48%), Gaps = 11/310 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID +C+ DA + G SPD++T+N+LIAG R + + LL EM E G
Sbjct: 364 MIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAG 423
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ + +Y +L+H Q+G + A + Q+MI + P T N +L+GLC N +AL
Sbjct: 424 LVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDAL 483
Query: 122 RMFRGLQK-----------HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
MF+ +QK +G P++ TYNILI GL G+ A + +E+ G P+
Sbjct: 484 EMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPD 543
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
ITY++++ + + ++ +M K ++ D + T+I + K G + + +
Sbjct: 544 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFC 603
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+M G+ D ++Y TLI + K ++ A + EM G D T ++ GL
Sbjct: 604 EMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 663
Query: 291 NIKGARLHLE 300
++ A LE
Sbjct: 664 ELERAVAMLE 673
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 179/370 (48%), Gaps = 11/370 (2%)
Query: 45 SLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF 104
S L +L ++ ++G P V ++N+L+H L + EA +F M P TF
Sbjct: 130 SKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMC----KPNVVTF 185
Query: 105 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 164
++NGLC+ A+ + + + G P +TY ++ G+CK G +A +L+++ +
Sbjct: 186 TTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEE 245
Query: 165 SGH-APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
H PN + Y TI+ +++ ++ + M+ K D Y +I F GR
Sbjct: 246 VSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWS 305
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
+A +++M+ + D+V+++ LIN + KEGK A L DEM + T++ +I
Sbjct: 306 DAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMI 365
Query: 284 DGLCKAGNIKGARLHLEYMNKI-GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 338
DG CK + A H+ Y+ G ++ +N ++ + ++D I + M
Sbjct: 366 DGFCKQNRLDAAE-HMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGL 424
Query: 339 VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
V ++ TY++++H C+ L +A LL + SGV ++DGL +G ++A +
Sbjct: 425 VANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALE 484
Query: 399 IQSKIRMAKI 408
+ ++ +K+
Sbjct: 485 MFKAMQKSKM 494
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 1/181 (0%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G+ PDV TYN LI G + +L +EM GI PD +Y+S++ L + + DEA
Sbjct: 504 GVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
++F M +P TFN ++ G CK D+ L +F + + G V + +TY LI G
Sbjct: 564 TQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYG 623
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK-GYTF 204
K + A I +E+ SG P+ IT ++ + + + + +L ++ GY
Sbjct: 624 FRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQMSVGYQL 683
Query: 205 D 205
+
Sbjct: 684 E 684
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ D + + M SPDVVT+N+LI G + ++ L+L EM + G
Sbjct: 550 MIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRG 609
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I D +Y +L++ ++ D A +FQ+MI + P T T ML GL + A+
Sbjct: 610 IVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAV 669
Query: 122 RMFRGLQ 128
M LQ
Sbjct: 670 AMLEDLQ 676
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 91/197 (46%), Gaps = 2/197 (1%)
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ F +I L +A D MV ++ + L+ + + G+ + L +ME
Sbjct: 54 SGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMP 113
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
C+ Y+ TIL+ C + A + K+GF + +N ++ L + +I A+++
Sbjct: 114 CNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDL 173
Query: 334 FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 393
F M + T++++++ LC+ R+ A LL L+ G++ + +VDG+ G
Sbjct: 174 FHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 233
Query: 394 REAKKIQSKIRMAKISH 410
A + K M ++SH
Sbjct: 234 VSALNLLRK--MEEVSH 248
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
M GI PD +TY+S+I G + S L + + D M PDV ++N+L+ + G
Sbjct: 534 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAG 593
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
D+ +F +M + T+ ++ G K D AL +F+ + G P+ +T
Sbjct: 594 MVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIR 653
Query: 141 ILIKGLCKAGRLRTARWILKEL 162
++ GL L A +L++L
Sbjct: 654 NMLTGLWSKEELERAVAMLEDL 675
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 168/332 (50%), Gaps = 36/332 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+IDA C++ Y + + M GIS DVVTY++LI G L ++ LL+EM+
Sbjct: 205 IIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKT 264
Query: 62 IPPDVWSYNSLMHCLFQLGK-----------------PD------------------EAN 86
I P+V++YN L+ L + GK PD +A
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQ 324
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
VF M +TP T+ I++NG CKN+ D AL +F+ + + VP +VTY+ LI GL
Sbjct: 325 HVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK+GR+ ++ E+ D G + ITY++++ +N + + + MK + +
Sbjct: 385 CKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNI 444
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
F + ++ K GRLK+A + + ++T G L++ +YN +IN +CK+G LE A +L +
Sbjct: 445 FTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSK 504
Query: 267 MEKQGFECDKYT-HTILIDGLCKAGNIKGARL 297
ME G + +T TI+I K N K +L
Sbjct: 505 MEDNGCIPNAFTFETIIIALFKKDENDKAEKL 536
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 199/409 (48%), Gaps = 6/409 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C G+++L ++ + G PD VT N+LI G + +L D++L
Sbjct: 99 ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT-PCTATFNIMLNGLCKNRYTDN 119
G + SY +L++ + ++G A ++ + I G LT P ++ +++ LCK +
Sbjct: 159 GFQLNQVSYATLINGVCKIGDTRGAIKLLRK-IDGRLTKPNVEMYSTIIDALCKYQLVSE 217
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +F + G ++VTY+ LI G C G+L+ A +L E+ PN TY ++
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ K K +L+ M + D Y T++ + + +K+A M GV
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+ +Y LIN +CK ++ A L EM ++ T++ LIDGLCK+G I +
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLI 397
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDS-FTYSSMVHNLCKA 355
+ M G +++ Y+ ++D L K+G +D AI +F M E++ + FT++ ++ LCK
Sbjct: 398 DEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKG 457
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
RL A ++ L G + +++G G EA + SK+
Sbjct: 458 GRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKME 506
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 187/400 (46%), Gaps = 4/400 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D + NRM +P ++ +N ++ + S ++ L + GI PD+ + N L
Sbjct: 41 DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
++C +G+ V ++ P T T N ++ GLC AL L GF
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
V+Y LI G+CK G R A +L+++ PN Y+TI+ + +
Sbjct: 161 QLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYG 220
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ S M KG + D Y T+I F G+LKEA + +MV + ++ +YN L++ C
Sbjct: 221 LFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
KEGK++ A +L M K + D T++ L+DG +K A+ M+ +G ++
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSC 368
Y +++ K+ +D A+N+F+ M K+ TYSS++ LCK+ R+P L+
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM 400
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
G +++DGL +G A + +K++ +I
Sbjct: 401 RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEI 440
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 108/201 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ D + M + + P +VTY+SLI G ++ + DL+DEM +
Sbjct: 344 ILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDR 403
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P DV +Y+SL+ L + G D A +F M ++ P TF I+L+GLCK +A
Sbjct: 404 GQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDA 463
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ L G+ + TYN++I G CK G L A +L ++ D+G PNA T+ TI+
Sbjct: 464 QEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIA 523
Query: 181 CFRNRKYKLGLEILSAMKRKG 201
F+ + ++L M +G
Sbjct: 524 LFKKDENDKAEKLLRQMIARG 544
>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 605
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 195/407 (47%), Gaps = 8/407 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ YC+ +++ M + PDV TY +LI G ++ + + L DEM +
Sbjct: 123 ILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENL 182
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P V +YN L++ F+ + + +M + P T+N+++ K DNA
Sbjct: 183 KLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNA 242
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R +++ GF P+ VT+N L G CKAGRL A ++ E+ G N++T TI+
Sbjct: 243 GNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHT 302
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
RK ++LS+ ++GY D Y T+I + K+G+ + ++M +
Sbjct: 303 LCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGK----SXXWDEMKEKEIIPS 358
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++Y T+I C+ GK + + +E+ + G D+ T+ +I G C+ G + A
Sbjct: 359 IITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRN 418
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M K F +L N +V L +G +D A+ +F++ K D+ T+++++ LC+
Sbjct: 419 KMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEG 478
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
R A LL + + A++ L +G +EA++ S I
Sbjct: 479 RFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGI 525
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 196/405 (48%), Gaps = 3/405 (0%)
Query: 2 LIDAYCQFVSFDAGY---TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
LI A ++ S + Y I + + + G+ + T+N LI G + LS ++ L+ +M
Sbjct: 16 LIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSEAIGLIGKMK 75
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
PD SYN+++ L + GK +EA + DM L P TFNI+++G CK +
Sbjct: 76 HFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLK 135
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A + + ++ +P++ TY LI GLCK G++ A + E+ + P+ +TY ++
Sbjct: 136 EAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLI 195
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
CF G E++ M+ KG + Y V+ +VK G++ A + + +M G
Sbjct: 196 NGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFS 255
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D V++NTL N YCK G+L A+ ++DEM ++G + + T ++ LC + A
Sbjct: 256 PDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKL 315
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRL 358
L +K G+ + +Y ++ K GK + E + TY +M+ LC++ +
Sbjct: 316 LSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKT 375
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ L+SG+ ++ ++ G G +A ++K+
Sbjct: 376 DQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKM 420
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 187/418 (44%), Gaps = 39/418 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLI+ + S G+ +++ M G+ P+ VTYN ++ + + + + L +M E
Sbjct: 193 MLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEES 252
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD ++N+L + + G+ EA R+ +M L + T N +L+ LC R D+A
Sbjct: 253 GFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDA 312
Query: 121 LRMFRGLQKHGF-------------------------------VPELVTYNILIKGLCKA 149
++ K G+ +P ++TY +I GLC++
Sbjct: 313 YKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMIGGLCRS 372
Query: 150 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 209
G+ + EL +SG P+ TY TI+ R + + M +K + D F
Sbjct: 373 GKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTC 432
Query: 210 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
++ G L +A + ++ G +D V++NT+I+ C+EG+ E A+ LL EME+
Sbjct: 433 NILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEE 492
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 329
+ D YTH ++ L AG +K A E+M+ I L+ +++ +
Sbjct: 493 KKLGPDCYTHNAILSALADAGRMKEAE---EFMSGIVEQGKLQDQTISLNK-----RKTE 544
Query: 330 AINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ + +S +S ++ LC + A ++ + G+ + KS ++++GL
Sbjct: 545 SSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLMEGL 602
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 128/269 (47%), Gaps = 12/269 (4%)
Query: 20 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 79
+ M+E I P ++TY ++I G R+ S+D +E+LE G+ PD +YN+++ +
Sbjct: 348 DEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCRE 407
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
G+ D+A M+ P T NI++ GLC D AL++F+ G + VT+
Sbjct: 408 GQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTF 467
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
N +I GLC+ GR A +L E+ + P+ T+ I+ + K E +S +
Sbjct: 468 NTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVE 527
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
+G D + + + K + +D + V+++ IN C +GK +
Sbjct: 528 QGKLQD---------QTISLNKRKTESSSETSQESDP---NSVAFSEQINELCTQGKYKD 575
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCK 288
A ++ E ++G K T+ L++GL K
Sbjct: 576 AMHMIQESTQKGIILHKSTYISLMEGLIK 604
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 102/240 (42%), Gaps = 23/240 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C+ D N + E+G+ PD TYN++I G R + + ++M++
Sbjct: 365 MIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKS 424
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+++ N L+ L G D+A ++F+ I TFN +++GLC+ + A
Sbjct: 425 FKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAF 484
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA------------- 168
+ +++ P+ T+N ++ L AGR++ A + + + G
Sbjct: 485 DLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTISLNKRKTE 544
Query: 169 ----------PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 218
PN++ ++ + KYK + ++ +KG Y +++ +K
Sbjct: 545 SSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLMEGLIK 604
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 203/421 (48%), Gaps = 13/421 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C S + N M G+ PD+VTYN L G L+S + ++ ML
Sbjct: 310 ILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLN 369
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G+ PD+ +Y L+ HC Q+G +E+ ++ + M+ L T+ ++L+ LCK+ D
Sbjct: 370 GLNPDLVTYTILICGHC--QMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRID 427
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A+ + ++ G P+L+TY++LI GLCK G + A + +E+ PN+ + I+
Sbjct: 428 EAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAII 487
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
F ++ + + Y +I + K+G + EA +Q++ G+
Sbjct: 488 SGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGIS 547
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
IV++N+LI +CK+GKL A LLD ++ G T+T L++G C+ G++
Sbjct: 548 PTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDM 607
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
L M Y +V L K+G++ ++ + + M + D TY++++ + CK
Sbjct: 608 LHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCK 667
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI-----QSKIRMAKIS 409
A L A +L L+ ++ +++GL G ++A ++ IR+ K++
Sbjct: 668 AHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVA 727
Query: 410 H 410
+
Sbjct: 728 Y 728
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 179/378 (47%), Gaps = 6/378 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ + C+ D +L+ M G+ PD++TY+ LI G + + +++L +EM
Sbjct: 415 VLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSK 474
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P+ + ++++ LF+ G EA F + D+ +NIM++G K A
Sbjct: 475 RIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEA 534
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+R ++ + + G P +VT+N LI G CK G+L A +L + G P ++TYTT+M
Sbjct: 535 VRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNG 594
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++L M+ K Y V+ K GRL E+ ++ M G+ D
Sbjct: 595 YCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPD 654
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++YNT+I +CK L+ A+ L ++M + + T+ +LI+GLC GN+K A L
Sbjct: 655 QITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLV 714
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKA 355
+ AY I+ G + +A+ F M V+ F YS++++ LCK
Sbjct: 715 TLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQM-VERGFEVSIRDYSAVINRLCKR 773
Query: 356 KRLPSASKLLLSCLKSGV 373
+ A L G+
Sbjct: 774 NLITDAKFFFCMMLTHGI 791
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 178/361 (49%), Gaps = 12/361 (3%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D + + N ++ +G+ + T LI G R S L ++ L E P V S+N+L
Sbjct: 217 DIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNAL 276
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
M ++G D A F MI L P ++NI+L+GLC + AL ++ HG
Sbjct: 277 MSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGV 336
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM--KCCFRN--RKYK 188
P++VTYNIL G G + A +++ + +G P+ +TYT ++ C N +K
Sbjct: 337 EPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFK 396
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
L ++LS +G Y ++++ K GR+ EA + +M G++ D+++Y+ LI
Sbjct: 397 LKEKMLS----QGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLI 452
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
+ CK G +E A L +EM + + + + +I GL + G I A+++ + + K
Sbjct: 453 HGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVA 512
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
+ YN ++D K G I A+ ++ + K T++S+++ CK +L A KL
Sbjct: 513 EEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKL 572
Query: 365 L 365
L
Sbjct: 573 L 573
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 184/388 (47%), Gaps = 39/388 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +CQ + + + + +M G+ +VTY L++ ++ + ++ LL EM +
Sbjct: 380 ILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVI 439
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD+ +Y+ L+H L + G +EA ++++M + P + + +++GL + A
Sbjct: 440 GLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEA 499
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
F + K E++ YNI+I G K G + A K++ + G +P +T+ +++
Sbjct: 500 QMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLI-- 557
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+G+C K G+L EA ++ + G+
Sbjct: 558 --------------------------YGFC-------KKGKLAEAVKLLDTIKVHGLVPT 584
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+Y TL+N YC+EG + + + +L EME + + + T+T+++ GLCK G + + L+
Sbjct: 585 SVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLK 644
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDS-FTYSSMVHNLCKAK 356
YM G + YN ++ K + A + M ++ S TY+ +++ LC
Sbjct: 645 YMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYG 704
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVV 384
L A +LL++ +R+ K A ++
Sbjct: 705 NLKDADRLLVTLQDQSIRLTKVAYTTII 732
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 176/382 (46%), Gaps = 7/382 (1%)
Query: 32 VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 91
V ++ L +R ++ +L +L +M + + + +YNSL L+ L D V+ +
Sbjct: 169 VVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSL---LYNLRHTDIMWDVYNE 225
Query: 92 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
+ + T I+++GLC+ +A+ R F P +V++N L+ G CK G
Sbjct: 226 IKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGS 285
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
+ A+ + G P+ +Y ++ + LE + M+ G D Y
Sbjct: 286 VDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNI 345
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+ F +G + A +++M+ +G+ D+V+Y LI +C+ G +E ++ L ++M QG
Sbjct: 346 LANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQG 405
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
+ T+T+L+ LCK+G I A + L M IG +L Y+ ++ L K G ++ AI
Sbjct: 406 LKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAI 465
Query: 332 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
++E M K +SF S+++ L + + A S KS V ++DG
Sbjct: 466 ELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGY 525
Query: 388 RHSGCRREAKKIQSKIRMAKIS 409
G EA + +I IS
Sbjct: 526 AKLGNIGEAVRSYKQIIEKGIS 547
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 151/319 (47%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
+ + ++ ++ +++ YN +I G + + ++ +++E GI P + ++NSL++ +
Sbjct: 503 FDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCK 562
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
GK EA ++ + L P + T+ ++NG C+ + M ++ P +T
Sbjct: 563 KGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQIT 622
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
Y +++KGLCK GRL + +LK + G P+ ITY T+++ + + ++ + M
Sbjct: 623 YTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQML 682
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
+ Y +I G LK+A + + ++L V+Y T+I +C +G ++
Sbjct: 683 QHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQ 742
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A + +M ++GFE ++ +I+ LCK I A+ M G + + ++
Sbjct: 743 NALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVML 802
Query: 319 DRLGKDGKIDHAINVFESM 337
+ + G + +F M
Sbjct: 803 NAFHRSGDPNSVFEIFAMM 821
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 115/271 (42%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ +L+ ++ G+ P VTY +L+ G + D+L EM
Sbjct: 556 LIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKA 615
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P +Y ++ L + G+ E+ ++ + M L P T+N ++ CK A
Sbjct: 616 IKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAF 675
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + +H P VTYN+LI GLC G L+ A +L L D + YTTI+K
Sbjct: 676 QLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAH 735
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ L M +G+ Y VI K + +A + M+T G+ D
Sbjct: 736 CAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQ 795
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
++N + + G + + + M K G
Sbjct: 796 DICLVMLNAFHRSGDPNSVFEIFAMMIKCGL 826
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 83/201 (41%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ C+ +L M G+ PD +TYN++I + L + L ++ML+
Sbjct: 625 VVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQH 684
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P +YN L++ L G +A+R+ + + + ++ C NA
Sbjct: 685 SLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNA 744
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L F + + GF + Y+ +I LCK + A++ + G P+ ++
Sbjct: 745 LVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNA 804
Query: 181 CFRNRKYKLGLEILSAMKRKG 201
R+ EI + M + G
Sbjct: 805 FHRSGDPNSVFEIFAMMIKCG 825
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 188/391 (48%), Gaps = 4/391 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ + M GI P+VVTYN++I G + + + D M
Sbjct: 196 IMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCR 255
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD ++Y S + + + GK +EA+ + + M L P T+N +++G C + A
Sbjct: 256 GVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMA 315
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G +P + TYN+LI L ++ A I+KE+ + G P+++TY ++
Sbjct: 316 FDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILING 375
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R K + M KG Y ++I K GR+K+A D E++V G+ D
Sbjct: 376 YCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPD 435
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++ +N LI+ +C G ++ A+ +L EM++ D+ T L+ G C+ G ++ AR +E
Sbjct: 436 LIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIE 495
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
M G + +YN ++ K G + A V + M TY++++ LCK +
Sbjct: 496 EMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNE 555
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
A +LL + G+ + ++++G+
Sbjct: 556 EGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 157/321 (48%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
I C+ + +L +M+E G+ P VTYN+LI G L + D D+M+ G
Sbjct: 267 FISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREG 326
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P V +YN L+H LF K DEA+ + ++M L P + T+NI++NG C+ A
Sbjct: 327 LMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAF 386
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P VTY LI L K GR++ A + +++ G P+ I + ++
Sbjct: 387 TLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGH 446
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N +L M + D + T++ + G+++ A + +E+M + G++ D
Sbjct: 447 CANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDH 506
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+SYNTLI+ Y K G ++ A+ + DEM GF T+ LI GLCK A L+
Sbjct: 507 ISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKE 566
Query: 302 MNKIGFDSNLEAYNCIVDRLG 322
M G N Y +++ +G
Sbjct: 567 MISKGITPNDNTYLSLIEGIG 587
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 196/407 (48%), Gaps = 4/407 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI A C+ D + + M+ G+ P V N +++ +++ + L EM M
Sbjct: 126 LLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRM 185
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I V ++N +++ L + GK +A M + P T+N +++G C + A
Sbjct: 186 RIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGA 245
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F ++ G P+ TY I G+CK G+L A +L+++ + G P A+TY T++
Sbjct: 246 RMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDG 305
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ + M R+G Y +I A ++ EA +++M G+ D
Sbjct: 306 YCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPD 365
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+YN LIN YC+ G ++ A+ L DEM +G + + T+T LI L K G +K A E
Sbjct: 366 SVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFE 425
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ + G +L +N ++D +G +D A + + M+ V D T+++++ C+
Sbjct: 426 KIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREG 485
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++ +A +L+ G++ + ++ G G ++A +++ ++
Sbjct: 486 KVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEM 532
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 82/198 (41%), Gaps = 35/198 (17%)
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y +I A ++ R +A + + M GV + + N +++L+ K + E A++L EM
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
+ + T I+I+ LCK GK K
Sbjct: 184 RMRIKSSVVTFNIMINVLCKE--------------------------------GKLKKAK 211
Query: 329 HAINVFESMEVKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLK-SGVRILKSAQKAVVDG 386
I + E++ +K + TY++++H C R+ A +++ +K GV+ + + G
Sbjct: 212 EFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGA-RMIFDLMKCRGVKPDSYTYGSFISG 270
Query: 387 LRHSGCRREAKKIQSKIR 404
+ G EA + K++
Sbjct: 271 MCKEGKLEEASGMLEKMK 288
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 188/377 (49%), Gaps = 7/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++A C+ F+ +L+ MR G +P++VTYN +I G R + + +LL+ +
Sbjct: 183 VLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSY 242
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD SY +L+ L + D+ +F +M+ + P TF++++ C+ + A
Sbjct: 243 GFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERA 302
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + +HG NI+I +CK GR+ A +L ++G G P+ I+YTT++K
Sbjct: 303 IQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKG 362
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R ++ E+L+ M R + + T I + G +++A +EQM G +
Sbjct: 363 LCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVG 422
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YN L+N +C +G +++A L M + + T+T L+ GLC A + GA +
Sbjct: 423 VVTYNALVNGFCVQGHIDSALELFRSMPCKP---NTITYTTLLTGLCNAERLDGAAELVA 479
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + N+ +N +V + G ++ AI + E M + TY++++ + K
Sbjct: 480 EMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDC 539
Query: 357 RLPSASKLLLSCLKSGV 373
A +LL + GV
Sbjct: 540 SSEDALELLHGLVSKGV 556
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 188/387 (48%), Gaps = 40/387 (10%)
Query: 21 RMREAGISP-DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 79
R E SP DV YN+L+AG R L + L+ M + PD ++Y L+ L
Sbjct: 100 RAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIRVLCDR 156
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
G+ +A + DM+ P T+ ++L +C+N + A+ + ++ G P +VTY
Sbjct: 157 GRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTY 216
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
N++I G+C+ GR+ AR +L L G P+ ++YTT++K ++++ E+ + M
Sbjct: 217 NVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMME 276
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
K + + +I F + G ++ A +EQM G + N +IN CK+G+++
Sbjct: 277 KNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDD 336
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKA------------------------------ 289
A+ LL++M G D ++T ++ GLC+A
Sbjct: 337 AFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFIC 396
Query: 290 -----GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-DSF 343
G I+ A + +E M++ G + YN +V+ G ID A+ +F SM K ++
Sbjct: 397 ILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTI 456
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLK 370
TY++++ LC A+RL A++L+ L+
Sbjct: 457 TYTTLLTGLCNAERLDGAAELVAEMLR 483
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 159/330 (48%), Gaps = 3/330 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I++ C+ D + +LN M G +PD ++Y +++ G R + +LL+EM+
Sbjct: 323 IVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRN 382
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PP+ ++N+ + L Q G ++A + + M T T+N ++NG C + D+A
Sbjct: 383 NCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSA 442
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +FR + P +TY L+ GLC A RL A ++ E+ PN +T+ ++
Sbjct: 443 LELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSF 499
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + +E++ M G T + Y T++ K ++A + + +V+ GV D
Sbjct: 500 FCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPD 559
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++++++I + KE ++E A L ++ G + ++ GLCK I A
Sbjct: 560 VITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFA 619
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
YM G N Y +++ L +G + A
Sbjct: 620 YMVSNGCMPNESTYIILIEGLAHEGLLKEA 649
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 143/295 (48%), Gaps = 3/295 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ C+ +D +LN M P+ VT+N+ I + L+ ++ L+++M E G
Sbjct: 359 VLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHG 418
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
V +YN+L++ G D A +F+ M C P T T+ +L GLC D A
Sbjct: 419 CTVGVVTYNALVNGFCVQGHIDSALELFRSMPC---KPNTITYTTLLTGLCNAERLDGAA 475
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + P +VT+N+L+ C+ G L A +++++ + G PN ITY T++
Sbjct: 476 ELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGI 535
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + LE+L + KG + D + ++I K R++EA + G++
Sbjct: 536 TKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKA 595
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
V YN ++ CK +++ A M G ++ T+ ILI+GL G +K A+
Sbjct: 596 VVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQ 650
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 137/298 (45%), Gaps = 42/298 (14%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
++ LC+ T +A R+ R + G ++ YN L+ G C+ G L AR + +G
Sbjct: 82 LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRL---IGSMP 138
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
AP+A TYT +++ + L +L M R+G + Y ++ A + ++A
Sbjct: 139 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAM 198
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+++M G +IV+YN +IN C+EG+++ A LL+ + GF+ D ++T L+ GL
Sbjct: 199 AVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGL 258
Query: 287 -----------------------------------CKAGNIKGARLHLEYMNKIGFDSNL 311
C+ G ++ A LE M + G +N
Sbjct: 259 CASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNT 318
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 365
N +++ + K G++D A + M D+ +Y++++ LC+A+R A +LL
Sbjct: 319 TLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELL 376
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 124/265 (46%), Gaps = 3/265 (1%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
CQ + ++ +M E G + VVTYN+L+ G + +L+L M P+
Sbjct: 399 CQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNT 455
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
+Y +L+ L + D A + +M+ GD P TFN++++ C+ + + A+ +
Sbjct: 456 ITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQ 515
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
+ +HG P L+TYN L+ G+ K A +L L G +P+ IT+++I+ + +
Sbjct: 516 MMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDR 575
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
+ +++ ++ G Y ++ K + A D+ MV++G + +Y
Sbjct: 576 IEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYII 635
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQG 271
LI EG L+ A LL + +G
Sbjct: 636 LIEGLAHEGLLKEAQDLLSVLCSRG 660
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 111/236 (47%), Gaps = 3/236 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ +C D+ L R P+ +TY +L+ G L + +L+ EML
Sbjct: 429 LVNGFCVQGHIDSA---LELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGD 485
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PP+V ++N L+ Q G +EA + + M+ TP T+N +L+G+ K+ +++AL
Sbjct: 486 CPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDAL 545
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ GL G P+++T++ +I L K R+ A + + D G P A+ Y I+
Sbjct: 546 ELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGL 605
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + ++ + M G + Y +I G LKEA D + + + GV
Sbjct: 606 CKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGV 661
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 93/166 (56%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +CQ + ++ +M E G +P+++TYN+L+ G T++ +L+LL ++
Sbjct: 495 VLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSK 554
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV +++S++ L + + +EA ++F + + P +N +L GLCK DNA
Sbjct: 555 GVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNA 614
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+ F + +G +P TY ILI+GL G L+ A+ +L L G
Sbjct: 615 IDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRG 660
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 65/167 (38%), Gaps = 36/167 (21%)
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
DG D+ LI C+ G+ A +L E G D + + L+ G C+ G++
Sbjct: 70 DGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDA 129
Query: 295 ARL--------------------------------HLEYMNKIGFDSNLEAYNCIVDRLG 322
AR L+ M + G N+ Y +++ +
Sbjct: 130 ARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMC 189
Query: 323 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
++ + A+ V + M K + TY+ +++ +C+ R+ A +LL
Sbjct: 190 RNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELL 236
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 172/347 (49%), Gaps = 5/347 (1%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
+AG DV TYN L+ S + +EML+ GI P+ +S+N L+ + + D
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV-PELVTYNIL 142
+A F+ M P TF I+++ LCK + A +F + GFV P+ + +
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
++ L KA R++ AR + ++ G P+AI Y T++ + + L++L M K
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
Y ++ + K G L+ A + M G + + V Y +LI+ + K G+++ A
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
L DEM + G+ D THT++IDGLCK+GN + A E M + G N+ Y I+ L
Sbjct: 352 LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLS 411
Query: 323 KDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 365
K G++ +A + + M DS TY ++ CK RL A++LL
Sbjct: 412 KIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLL 458
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 191/374 (51%), Gaps = 10/374 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
+L+D C+ + + + + M G + PD + +++ + + + ++ +M +
Sbjct: 194 ILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEK 253
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G PPD +YN+++ L + G EA +V +M+ P T+ I++N LCK +
Sbjct: 254 CGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLER 313
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +FR + GF P V Y LI G K+GR++ A + E+ ++G+ P+ IT+T ++
Sbjct: 314 AEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMID 373
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
++ ++ + M R G + Y T+I KIGR+ A M+ M+ G
Sbjct: 374 GLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFP 433
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D V+Y L++ +CK G+L+ A LLDE++K + ++ L+ GLC G+++ L
Sbjct: 434 DSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDL 493
Query: 300 EYMNKIGFDSNLEAYNC--IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 353
+K + NL+ C I+ L K G++D A +F+ M + D+ TY+ +++ LC
Sbjct: 494 FEQSKAAAE-NLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLC 552
Query: 354 KAK--RLPSASKLL 365
+++ R+ A LL
Sbjct: 553 RSRENRVERAFALL 566
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 190/406 (46%), Gaps = 10/406 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI ++ + D T M+ PD+ T+ L+ + + + ++ EM+ M
Sbjct: 159 ILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAM 218
Query: 61 G-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G +PPD + +++ L + + EA VF M P +N M++GL K +
Sbjct: 219 GFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQE 278
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
AL++ + VP VTY IL+ LCKAG L A + + + SG PN++ YT+++
Sbjct: 279 ALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIH 338
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
++ + K + M GY D + +I K G ++A E+M+ G +
Sbjct: 339 GFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKP 398
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
++V+Y T+I K G++ A+ ++ M G D T+ L+DG CK G + A L
Sbjct: 399 NVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLL 458
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI-NVFE----SMEVKDSFTYSSMVHNLCK 354
+ ++K NL+ Y+ +V L G +++ + ++FE + E D S++ LCK
Sbjct: 459 DELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCK 518
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 400
RL A ++ + G + + +++GL CR +++
Sbjct: 519 TGRLDEACRIFQRMVSEGCKPDATTYNILINGL----CRSRENRVE 560
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 187/441 (42%), Gaps = 43/441 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + + ++ + M EAG PDV+T+ +I G ++ + +EM+ G
Sbjct: 336 LIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG 395
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +Y +++ L ++G+ A R+ + MI P + T+ +L+G CK D A
Sbjct: 396 CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAA 455
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLC---------------------------------- 147
++ L K P L Y+ L+KGLC
Sbjct: 456 QLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVG 515
Query: 148 --KAGRLRTARWILKELGDSGHAPNAITYTTIMK--CCFRNRKYKLGLEILSAMKRKGYT 203
K GRL A I + + G P+A TY ++ C R + + +L ++ GY
Sbjct: 516 LCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYL 575
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y + KIG + A +E+ + G D+V+Y L C +G+++ A L
Sbjct: 576 PDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSL 635
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
EM +QG D + +I+GL K ++ A + M G + Y +V L
Sbjct: 636 FQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCH 695
Query: 324 DGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
G +D A + FE M + Y +++H CKA ++ +A KL + G
Sbjct: 696 AGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAV 755
Query: 379 AQKAVVDGLRHSGCRREAKKI 399
++ DGL SG +A+++
Sbjct: 756 TSASLFDGLVRSGKTEKAQEL 776
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 160/361 (44%), Gaps = 39/361 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D +C+ D +L+ + + SP++ Y+SL+ G + +LD L E +
Sbjct: 441 LLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAA 500
Query: 62 IPP-DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR--YTD 118
D S++ L + G+ DEA R+FQ M+ P T+NI++NGLC++R +
Sbjct: 501 AENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVE 560
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A + L+ G++P+ VTY L GLCK G + A +L+E G + + YT +
Sbjct: 561 RAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALC 620
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ + + M R+G D YC +I +K +L++A + ++M+ G +
Sbjct: 621 TGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQK 680
Query: 239 LDIVSY------------------------------------NTLINLYCKEGKLEAAYL 262
+ +Y + LI+ +CK K++AA
Sbjct: 681 PTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALK 740
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
L ++M +G T L DGL ++G + A+ L+ M G + + I+D L
Sbjct: 741 LFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLR 800
Query: 323 K 323
K
Sbjct: 801 K 801
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 119/291 (40%), Gaps = 3/291 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG--ATRNSLLSCSLDLLDEMLE 59
+I C+ D I RM G PD TYN LI G +R + + + LL ++
Sbjct: 512 IIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEM 571
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+G PD +Y L L ++G+ D A ++ ++ + + GLC D
Sbjct: 572 VGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDR 631
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+ +F+ + + G P+ Y +I GL K +L A E+ G P TYT +++
Sbjct: 632 AVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQ 691
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFG-YCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
M +G Y +I F K ++ A E M++ G
Sbjct: 692 ALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNV 751
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
V+ +L + + GK E A LL EM G T T ++DGL K+
Sbjct: 752 PTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKS 802
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 129/290 (44%), Gaps = 6/290 (2%)
Query: 115 RYTDNALRMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+ T A+ FR ++ GF ++ TYN L+ L I +E+ +G APN +
Sbjct: 97 KVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFS 156
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
+ +++ R R+ + MKRK D + ++ K G ++A + +M+
Sbjct: 157 FNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMM 216
Query: 234 TDG-VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
G V D + ++ K +++ A + +MEK GF D + +IDGL KAG+
Sbjct: 217 AMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHA 276
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 348
+ A L+ M Y +V+ L K G ++ A +F M +S Y+S+
Sbjct: 277 QEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSL 336
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
+H K+ R+ A L +++G R ++DGL SG +A K
Sbjct: 337 IHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAK 386
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 106/260 (40%), Gaps = 45/260 (17%)
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
A ++ G+ D F Y ++ V + E+M+ G+ + S+N LI + +
Sbjct: 109 AGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTR 168
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG------------------------- 290
+ + A + M+++ + D +T IL+D LCKAG
Sbjct: 169 RADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALH 228
Query: 291 -----------NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
+K AR M K GF + AYN ++D L K G A+ V ++M
Sbjct: 229 TAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLA 288
Query: 340 K----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
K TY +V++LCKA L A +L SG R +++ G SG +E
Sbjct: 289 KACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKE 348
Query: 396 A-----KKIQSKIRMAKISH 410
A + +++ R I+H
Sbjct: 349 ACSLFDEMVEAGYRPDVITH 368
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L+ A C + D + M G + V+ Y++LI G + + +L L ++M+
Sbjct: 689 LVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISR 748
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P + SL L + GK ++A + Q+M G P ATF +L+GL R +D +
Sbjct: 749 GNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL---RKSDES 805
Query: 121 LRMFRGLQK 129
++ + +Q+
Sbjct: 806 GKLLKLVQE 814
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 194/399 (48%), Gaps = 4/399 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ A +L R + PDVV YN++I G ++ ++ + DL E +
Sbjct: 304 LINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKR 363
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV++YN+L+ +GK +A +F M ++ P TF+I+++G CK+ A
Sbjct: 364 IFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAK 423
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K P++VTY+ L+ G C + A I + G N +Y ++
Sbjct: 424 NVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGF 483
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + +++ M K D Y ++I K GR+ A + +++M G Q DI
Sbjct: 484 CKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDI 543
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN++++ CK+ ++ A LL +++ QG D T+TIL+ GLC++G ++ AR E
Sbjct: 544 ITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFED 603
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G++ ++ AY ++ G D A+ + ME + D+ TY ++ +L +
Sbjct: 604 LLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDE 663
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
A KLL + G+ + + +R + C R A
Sbjct: 664 NDMAEKLLREMIMRGLLVALTDDLVASILVRRTWCARLA 702
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 185/388 (47%), Gaps = 4/388 (1%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
++ + G PD +T + I G + +L D+++ MG D SY +L++ L ++G
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
+ A + + + P +N +++G+CK+++ ++A ++ P++ TYN
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
LI G C G+L+ A + ++ P+ T++ ++ ++ K +L+ M ++
Sbjct: 373 ALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQ 432
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
D Y +++ + + + +A M GV ++ SYN +IN +CK ++ A
Sbjct: 433 SIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEA 492
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
L EM + D T++ LIDGLCK+G I A ++ M+ G ++ YN I+D
Sbjct: 493 MKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDA 552
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
L K +D AI + ++ + D TY+ +V LC++ +L A K+ L G +
Sbjct: 553 LCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLD 612
Query: 377 KSAQKAVVDGLRHSGCRREAKKIQSKIR 404
A ++ G G EA + SK+
Sbjct: 613 VYAYTVMIQGFCDKGLFDEALALLSKME 640
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 137/271 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D +C+ + +L M + I PDVVTY+SL+ G + ++ + + + M
Sbjct: 408 ILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHR 467
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ +V SYN +++ ++ DEA ++F++M + P T++ +++GLCK+ A
Sbjct: 468 GVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYA 527
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + G P+++TYN ++ LCK + A +L +L G P+ TYT ++K
Sbjct: 528 LELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKG 587
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K + ++ + KGY D + Y +I F G EA + +M +G D
Sbjct: 588 LCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPD 647
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+Y +I ++ + + A LL EM +G
Sbjct: 648 AKTYEIIILSLFEKDENDMAEKLLREMIMRG 678
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 182/373 (48%), Gaps = 5/373 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ F+ +L M G D T ++ R DL M EMG
Sbjct: 187 LVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMG 246
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PP++ +Y++ + L + G +A V ++M+ L P T +++GLCK + + A
Sbjct: 247 TPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAF 306
Query: 122 RMFRGLQKHG-FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+F L K + P + TY ++I G CK G+L A +L + + G APN TYTT++
Sbjct: 307 RLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHG 366
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + E+++ MK +G+ + + Y +I F K G+++EA + + G+ LD
Sbjct: 367 HCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLD 426
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+Y LI +CK+G + A L +M ++ D +T+T +I C+ ++ ++ +
Sbjct: 427 KVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFD 486
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
IG + Y ++ + GK+ A+ VFE M + DS TY +++ +LCK
Sbjct: 487 KCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKES 546
Query: 357 RLPSASKLLLSCL 369
RL A L + L
Sbjct: 547 RLEEARALFETML 559
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 159/338 (47%), Gaps = 1/338 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ A+C+ F + RM E G P++V Y++ I G + + +L+EM+
Sbjct: 221 VVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGK 280
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDN 119
G+ P+V+++ SL+ L ++G + A R+F ++ P T+ +M+ G CK
Sbjct: 281 GLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLAR 340
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + + + G P TY LI G CK G A ++ ++ G PN TY I+
Sbjct: 341 AEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIG 400
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ K + ++L +G D Y +I K G + A D +QM
Sbjct: 401 GFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHP 460
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DI +Y T+I +YC++ ++E + L D+ G K T+T +I G C+ G + A
Sbjct: 461 DIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVF 520
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
E M + G + Y ++ L K+ +++ A +FE+M
Sbjct: 521 ERMVQHGCLPDSITYGALISSLCKESRLEEARALFETM 558
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 183/380 (48%), Gaps = 14/380 (3%)
Query: 18 ILNRMREAGISPDVVTYNSLI-AGATRNSLLSCSLDLLDEMLEM--GIPPDVWSYNSLMH 74
+L +R G+ V T N ++ G + + + D M G+ PD S+ +L+
Sbjct: 130 MLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRPDHRSFRALVL 189
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
+ G+ +EA+ + M +AT +++ C+ N +FR + + G P
Sbjct: 190 GCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPP 249
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM----KCCFRNRKYKLG 190
+V Y+ I GLC+ G ++ A +L+E+ G PN T+T+++ K + R ++L
Sbjct: 250 NMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLF 309
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
L+++ K Y + Y +I + K G+L A + +MV G+ + +Y TLI+
Sbjct: 310 LKLV---KSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHG 366
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+CK G + A+ L+++M+ +GF + YT+ +I G CK G I+ A L G +
Sbjct: 367 HCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLD 426
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
Y ++ K G I A+++F+ M K D TY++++ C+ +++ + +L
Sbjct: 427 KVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFD 486
Query: 367 SCLKSGVRILKSAQKAVVDG 386
CL G+ K +++ G
Sbjct: 487 KCLSIGLVPTKQTYTSMIAG 506
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 143/325 (44%), Gaps = 14/325 (4%)
Query: 52 DLLDEMLEMGIPPDVWSYNSLMHC-LFQLGKPDEANRVFQDMI--CGDLTPCTATFNIML 108
D+L E+ G+P V + N ++ L G A F M G + P +F ++
Sbjct: 129 DMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRPDHRSFRALV 188
Query: 109 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
G C+ + A + + GF + T ++++ C+ GR R + + + + G
Sbjct: 189 LGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTP 248
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
PN + Y+ + K +L M KG + + + ++I KIG ++ A
Sbjct: 249 PNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRL 308
Query: 229 MEQMV-TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
++V + + ++ +Y +I YCKEGKL A +LL M +QG + T+T LI G C
Sbjct: 309 FLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHC 368
Query: 288 KAGNIKGARLHLEYMNKI---GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 340
K G+ A E MNK+ GF N+ YN I+ K GKI A V +
Sbjct: 369 KGGSFDRA---FELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHL 425
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLL 365
D TY+ ++ CK + A L
Sbjct: 426 DKVTYTILITEHCKQGHITCALDLF 450
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 158/369 (42%), Gaps = 44/369 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I YC+ +L RM E G++P+ TY +LI G + + +L+++M
Sbjct: 327 VMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLE 386
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P++++YN++ + G CK A
Sbjct: 387 GFLPNIYTYNAI-----------------------------------IGGFCKKGKIQEA 411
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ R G + VTY ILI CK G + A + K++ + P+ TYTTI+
Sbjct: 412 YKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAM 471
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ R+ + ++ G Y ++IA + ++G+L A E+MV G D
Sbjct: 472 YCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPD 531
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
++Y LI+ CKE +LE A L + M +K CD T L C+ I A +
Sbjct: 532 SITYGALISSLCKESRLEEARALFETMLDKHLVPCD-VTRVTLAYEYCRRDKITIA---V 587
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI----NVFESMEVKDSFTYSSMVHNLCKA 355
+++++ + +V +L G +D A NV + D TY+S +++ ++
Sbjct: 588 SFLDRLDKRQQAHTADALVRKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFINSCYES 647
Query: 356 KRLPSASKL 364
R AS++
Sbjct: 648 NRYALASEI 656
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 141/296 (47%), Gaps = 11/296 (3%)
Query: 119 NALRMFRGLQKHGFVPELVTYNILIK-GLCKAGRLRTARWILKELGDS--GHAPNAITYT 175
A M L+ HG + T N +++ GL G AR + + G P+ ++
Sbjct: 126 EAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRPDHRSFR 185
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
++ C R +++ +L+AM +G+ D V+ AF + GR + TD +M
Sbjct: 186 ALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEM 245
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G ++V+Y+ I+ C+ G ++ A+ +L+EM +G + + YTHT LIDGLCK G ++ A
Sbjct: 246 GTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERA 305
Query: 296 -RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI----NVFESMEVKDSFTYSSMVH 350
RL L+ + + N+ Y ++ K+GK+ A + E ++ TY++++H
Sbjct: 306 FRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIH 365
Query: 351 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
CK A +L+ G A++ G G +EA K+ +RMA
Sbjct: 366 GHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKV---LRMA 418
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 3/199 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I YCQ + + ++ G+ P TY S+IAG R L+ +L + + M++ G
Sbjct: 468 IIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHG 527
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +Y +L+ L + + +EA +F+ M+ L PC T + C+ A+
Sbjct: 528 CLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAV 587
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
L K + T + L++ L G L A LK + D +A + TYT+ + C
Sbjct: 588 SFLDRLDKR---QQAHTADALVRKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFINSC 644
Query: 182 FRNRKYKLGLEILSAMKRK 200
+ + +Y L EI + ++
Sbjct: 645 YESNRYALASEISEKISKR 663
>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 806
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 188/384 (48%), Gaps = 3/384 (0%)
Query: 23 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 82
+E G+ PD VTYN+LI T++ +L L + E G D Y++++H L + G+
Sbjct: 375 KEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRM 434
Query: 83 DEANRVFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
EA + +M+ G P T+ ++NG C+ D A ++ + + HG P V+Y
Sbjct: 435 SEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTA 494
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
L+ G+C+ G+ AR ++ + +PN+ITY+ IM R K +++ M KG
Sbjct: 495 LLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKG 554
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ ++ + + GR EA +ME+ + G +++V++ T+I+ +C+ +L+AA
Sbjct: 555 FFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAAL 614
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+LD+M D +T+T L+D L K G I A ++ M G D Y ++ R
Sbjct: 615 SVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRY 674
Query: 322 GKDGKIDHAINVFESM--EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
+ GK+D + + E M K Y+ ++ LC +L A LL L++ R
Sbjct: 675 CQMGKVDDLVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKT 734
Query: 380 QKAVVDGLRHSGCRREAKKIQSKI 403
A+++G G A K+ ++
Sbjct: 735 CYALMEGYLKKGVPLSAYKVACRM 758
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 176/364 (48%), Gaps = 6/364 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L M+ GI ++ ++ +R L +L +L M G+ P++ N+ +
Sbjct: 229 VLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFV 288
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ + ++A R + M + P T+N M+ G C + A+ + + G +P+ V
Sbjct: 289 RANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKV 348
Query: 138 TYNILIKGLCKAGRLRTARWILKELG-DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+Y ++ LCK R+ R ++K++ + G P+ +TY T++ ++ L L
Sbjct: 349 SYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKD 408
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG-VQLDIVSYNTLINLYCKEG 255
+ KG+ D GY ++ A K GR+ EA D + +M++ G D+V+Y ++N +C+ G
Sbjct: 409 AQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLG 468
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
+++ A LL M G + + ++T L++G+C+ G AR + + + N Y+
Sbjct: 469 EVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYS 528
Query: 316 CIVDRLGKDGKIDHAINVFESMEVKDSFT----YSSMVHNLCKAKRLPSASKLLLSCLKS 371
I+ L ++GK+ A +V M +K F + ++ +LC+ R A K + CL
Sbjct: 529 VIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNK 588
Query: 372 GVRI 375
G I
Sbjct: 589 GCAI 592
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 129/289 (44%), Gaps = 2/289 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ +C+ D +L M G P+ V+Y +L+ G R + ++++ E
Sbjct: 460 VVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHW 519
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y+ +MH L + GK EA V ++M+ P N++L LC++ T A
Sbjct: 520 WSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEAR 579
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ G +V + +I G C+ L A +L ++ + TYTT++
Sbjct: 580 KFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTL 639
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + E++ M KG Y TVI + ++G++ + +E+M++ I
Sbjct: 640 GKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI 699
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
YN +I C GKLE A LL ++ + D T L++G K G
Sbjct: 700 --YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKG 746
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 139/299 (46%), Gaps = 6/299 (2%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
ML L K + + R+ +++ G ++ ++ +AG+LR A +L + +G
Sbjct: 213 MLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAG 272
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
PN + T + R + + L L M+ G + Y +I + + R++EA
Sbjct: 273 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 332
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ-GFECDKYTHTILIDG 285
+ +E M + G D VSY T++ CKE ++ L+ +M K+ G D+ T+ LI
Sbjct: 333 ELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHM 392
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----- 340
L K + A L+ + GF + Y+ IV L K+G++ A ++ M K
Sbjct: 393 LTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPP 452
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D TY+++V+ C+ + A KLL G + + A+++G+ +G EA+++
Sbjct: 453 DVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREM 511
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 4/168 (2%)
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
Y D Y +++ K + + + M G+ +++ ++ Y + G+L A
Sbjct: 203 YRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDAL 262
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+L M++ G E + ID +A ++ A LE M +G N+ YNC++
Sbjct: 263 KVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 322
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
+++ AI + E M K D +Y +++ LCK KR+ L+
Sbjct: 323 CDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLM 370
>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
Length = 802
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 187/383 (48%), Gaps = 5/383 (1%)
Query: 23 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 82
+E G+ PD VTYN+LI T++ +L L + E G D Y++++H L + G+
Sbjct: 375 KEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRM 434
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
EA + +M C P T+ ++NG C+ D A ++ + + HG P V+Y L
Sbjct: 435 SEAKDLINEMDC---PPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTAL 491
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
+ G+C+ G+ AR ++ + +PN+ITY+ IM R K +++ M KG+
Sbjct: 492 LNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGF 551
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
++ + + GR EA +ME+ + G +++V++ T+I+ +C+ +L+AA
Sbjct: 552 FPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALS 611
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
+LD+M D +T+T L+D L K G I A ++ M G D Y ++ R
Sbjct: 612 VLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYC 671
Query: 323 KDGKIDHAINVFESM--EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
+ GK+D + + E M K Y+ ++ LC +L A LL L++ R
Sbjct: 672 QMGKVDDLVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTC 731
Query: 381 KAVVDGLRHSGCRREAKKIQSKI 403
A+++G G A K+ ++
Sbjct: 732 YALMEGYLKKGVPLSAYKVACRM 754
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 173/363 (47%), Gaps = 8/363 (2%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L M+ GI ++ ++ +R L +L +L M G+ P++ N+ +
Sbjct: 229 VLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFV 288
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ + ++A R + M + P T+N M+ G C + A+ + + G +P+ V
Sbjct: 289 RANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKV 348
Query: 138 TYNILIKGLCKAGRLRTARWILKELG-DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+Y ++ LCK R+ R ++K++ + G P+ +TY T++ ++ L L
Sbjct: 349 SYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKD 408
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
+ KG+ D GY ++ A K GR+ EA D + +M D+V+Y ++N +C+ G+
Sbjct: 409 AQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM---DCPPDVVTYTAVVNGFCRLGE 465
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
++ A LL M G + + ++T L++G+C+ G AR + + + N Y+
Sbjct: 466 VDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSV 525
Query: 317 IVDRLGKDGKIDHAINVFESMEVKDSFT----YSSMVHNLCKAKRLPSASKLLLSCLKSG 372
I+ L ++GK+ A +V M +K F + ++ +LC+ R A K + CL G
Sbjct: 526 IMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKG 585
Query: 373 VRI 375
I
Sbjct: 586 CAI 588
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 151/318 (47%), Gaps = 40/318 (12%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D L +E G D + Y++++ + +S + DL++EM PPDV +Y ++
Sbjct: 400 DEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM---DCPPDVVTYTAV 456
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
++ +LG+ D+A ++ Q M P T ++ +LNG+C+ + A M ++H +
Sbjct: 457 VNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWW 516
Query: 133 VPELVTY-----------------------------------NILIKGLCKAGRLRTARW 157
P +TY N+L++ LC+ GR AR
Sbjct: 517 SPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARK 576
Query: 158 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 217
++E + G A N + +TT++ +N + L +L M D F Y T++
Sbjct: 577 FMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLG 636
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 277
K GR+ EAT+ M++M+ G+ V+Y T+I+ YC+ GK++ +L++M + +C +
Sbjct: 637 KKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQ-KC-RT 694
Query: 278 THTILIDGLCKAGNIKGA 295
+ +I+ LC G ++ A
Sbjct: 695 IYNQVIEKLCVLGKLEEA 712
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 129/289 (44%), Gaps = 2/289 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ +C+ D +L M G P+ V+Y +L+ G R + ++++ E
Sbjct: 456 VVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHW 515
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y+ +MH L + GK EA V ++M+ P N++L LC++ T A
Sbjct: 516 WSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEAR 575
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ G +V + +I G C+ L A +L ++ + TYTT++
Sbjct: 576 KFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTL 635
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + E++ M KG Y TVI + ++G++ + +E+M++ I
Sbjct: 636 GKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI 695
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
YN +I C GKLE A LL ++ + D T L++G K G
Sbjct: 696 --YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKG 742
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 139/295 (47%), Gaps = 2/295 (0%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
ML L K + + R+ +++ G ++ ++ +AG+LR A +L + +G
Sbjct: 213 MLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAG 272
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
PN + T + R + + L L M+ G + Y +I + + R++EA
Sbjct: 273 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 332
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ-GFECDKYTHTILIDG 285
+ +E M + G D VSY T++ CKE ++ L+ +M K+ G D+ T+ LI
Sbjct: 333 ELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHM 392
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-VKDSFT 344
L K + A L+ + GF + Y+ IV L K+G++ A ++ M+ D T
Sbjct: 393 LTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMDCPPDVVT 452
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
Y+++V+ C+ + A KLL G + + A+++G+ +G EA+++
Sbjct: 453 YTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREM 507
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 4/168 (2%)
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
Y D Y +++ K + + + M G+ +++ ++ Y + G+L A
Sbjct: 203 YRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDAL 262
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+L M++ G E + ID +A ++ A LE M +G N+ YNC++
Sbjct: 263 KVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 322
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
+++ AI + E M K D +Y +++ LCK KR+ L+
Sbjct: 323 CDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLM 370
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 185/394 (46%), Gaps = 5/394 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID + + G M + P TY +I G + +L + + ++M++ G
Sbjct: 149 VIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKG 208
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +Y +L+ + K DEA ++ M+ P T+ +++G CK + A
Sbjct: 209 CVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAK 268
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ +++ G P L + L+ GR A +L E+ G AP+ I YT+++
Sbjct: 269 EVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLL 328
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F + + +M KG D Y T+I F KIG ++ A + +E M GV D
Sbjct: 329 FSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDC 388
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLE 300
+YN+L++ Y K +++ A+ + D M G + + T +L+ GL K G A L E
Sbjct: 389 FAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKE 448
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
+ K L +Y ++D LGK G++ A F+ M + + TY+S++++L KA
Sbjct: 449 MLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAG 508
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
R+P A KL+ +K GV A A++ GL S
Sbjct: 509 RIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDS 542
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 188/397 (47%), Gaps = 7/397 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ + +M + G PD +TY +LI G ++ S + + LLD ML
Sbjct: 183 VVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK 242
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +Y S++H +L +EA V M P F +L+ + A
Sbjct: 243 GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEA 302
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G P+++ Y LI L GR+ AR + + + G AP+A+TY TI++
Sbjct: 303 YQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQN 362
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + EIL M + G D F Y +++ +VK+ R+ +A ++MV G++ +
Sbjct: 363 FSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPN 422
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
V++N L++ K+GK + A+ L EM EK+ ++TILIDGL KAG + A L
Sbjct: 423 AVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQF 482
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-----DSFTYSSMVHNLCK 354
+ M G Y ++ L K G+I A + E M VK D YS+++ L
Sbjct: 483 QEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDM-VKLGVNPDVQAYSALITGLID 541
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ + +A + +K G + K + G R +G
Sbjct: 542 SSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 578
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 178/398 (44%), Gaps = 16/398 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ G+ +LN+ + PDV Y S+I G C LD
Sbjct: 48 LIHGFCKAGQPQVGHKLLNQALKR-FRPDVFLYTSVIHG-------YCKAGDLDTGYFRA 99
Query: 62 IPP----DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
+ P DV SY +++ L + DEA +F+++ +P + +++GL K
Sbjct: 100 VTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRI 159
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
++ L+ F + VP TY ++I GLCKA L A + +++ G P+ ITYTT+
Sbjct: 160 EDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTL 219
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + K ++L M KG Y +++ F K+ + EA + + QM G
Sbjct: 220 IDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGC 279
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+ + + +L++ Y +G+ E AY +L EM +G D +T LID L G + AR
Sbjct: 280 EPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARH 339
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLC 353
+ M + G + Y I+ K G ++ A + E M D F Y+S++
Sbjct: 340 VFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYV 399
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
K +R+ A + + SG++ ++ GL G
Sbjct: 400 KLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDG 437
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 179/396 (45%), Gaps = 35/396 (8%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G P +V+YN++I+G + + + M++ G PDV ++ +L+H + G+P
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61
Query: 86 NRVFQDMI-------------------CGDL--------TPCTA----TFNIMLNGLCKN 114
+++ + GDL TP + ++ ++ GL +
Sbjct: 62 HKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADS 121
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
+ D A +F L+ G P +V Y +I GL KAGR+ +E+ S P TY
Sbjct: 122 KRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTY 181
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
T ++ + + ++ M +KG D Y T+I F K ++ EA ++ M+T
Sbjct: 182 TVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLT 241
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G + V+Y ++++ +CK + A ++ +M ++G E + T L+ G +
Sbjct: 242 KGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEE 301
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 350
A L M G ++ Y ++D L G++ A +VF+SM K D+ TY +++
Sbjct: 302 AYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQ 361
Query: 351 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
N K + +A ++L KSGV A +++DG
Sbjct: 362 NFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDG 397
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 134/276 (48%), Gaps = 10/276 (3%)
Query: 134 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 193
P +V+YN +I GL ++ A + D+G P+ I +TT++ + + ++G ++
Sbjct: 5 PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL 64
Query: 194 LS-AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
L+ A+KR + D F Y +VI + K G L T Y + VT LD++SY T+I
Sbjct: 65 LNQALKR--FRPDVFLYTSVIHGYCKAGDLD--TGYF-RAVTPKASLDVISYTTVIKGLA 119
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
+++ A L +E++ G + +T +IDGL KAG I+ + E M+
Sbjct: 120 DSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRT 179
Query: 313 AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
Y ++D L K + A VFE M V D+ TY++++ KA ++ A KLL
Sbjct: 180 TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 239
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
L G ++V G EAK++ +++R
Sbjct: 240 LTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMR 275
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 119/240 (49%), Gaps = 2/240 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I + + + +A IL M ++G+ PD YNSL+ G + + + + D M+ G
Sbjct: 359 IIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASG 418
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT-ATFNIMLNGLCKNRYTDNA 120
I P+ ++N LMH LF+ GK D A +F++M+ + P T ++ I+++GL K A
Sbjct: 419 IKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEA 478
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
F+ + G +PE TY LI L KAGR+ A+ +++++ G P+ Y+ ++
Sbjct: 479 FLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITG 538
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ M ++G + Y + F GR + + ++Q + GV ++
Sbjct: 539 LIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALD-LEAVKQHFSQGVAME 597
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 8/160 (5%)
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK-G 294
G + IVSYNT+I+ K++ AY + M G E D T LI G CKAG + G
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---DSFTYSSMVHN 351
+L + + + F ++ Y ++ K G +D F ++ K D +Y++++
Sbjct: 62 HKLLNQALKR--FRPDVFLYTSVIHGYCKAGDLD--TGYFRAVTPKASLDVISYTTVIKG 117
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
L +KR+ A +L +G A AV+DGL +G
Sbjct: 118 LADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAG 157
>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
Length = 845
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 196/446 (43%), Gaps = 43/446 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ + D +L +M EAG P+ +TYNSLI G + + + + S+ + +M
Sbjct: 285 LIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSC 344
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEA----------------------------------- 85
G+ P V + NS +H LF+ G+ +EA
Sbjct: 345 GVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVW 404
Query: 86 ---NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
+ +F M+ + P FNI++N + D A+ +F +Q G +P+ VT+ +
Sbjct: 405 VMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATV 464
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
I LC+ GRL A + D G P+ Y +++ C + + E++S M K
Sbjct: 465 ISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDI 524
Query: 203 TFDGFGY-CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
G Y ++I K GR+ E D M+ MV G + ++V++N+L+ YC G +E A+
Sbjct: 525 PPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAF 584
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
LLD M G E + Y + L+DG CK G I A M G Y+ I+ L
Sbjct: 585 ALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGL 644
Query: 322 GKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
+ + A +F ES TY ++ LC+ A+ LL V+
Sbjct: 645 FQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDI 704
Query: 378 SAQKAVVDGLRHSGCRREAKKIQSKI 403
V+ + G R+EAK++ I
Sbjct: 705 ITFNIVISAMFKVGRRQEAKELFDAI 730
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 181/383 (47%), Gaps = 11/383 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID Y + D G I+ R+ + G+ PD +Y SLI G ++ + + L EM+E
Sbjct: 181 ILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQ 239
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P + NS++ L ++ + D+A + Q M+ + P T++++++GLCK++ D A
Sbjct: 240 GVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA 299
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+ + + G P +TYN LI G +G + + K++ G P + +
Sbjct: 300 ERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHA 359
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCT----VIAAFVKIGRLKEATDYMEQMVTDG 236
F++ + I +M KG D Y T V +V + + + M+T G
Sbjct: 360 LFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVM-WHNIFNLMLTKG 418
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
+ + +N LIN Y + G ++ A L+ ++M+ +G D T +I LC+ G + A
Sbjct: 419 IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDAL 478
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHN 351
+M IG + Y C++ G++ A + M KD +SS+++N
Sbjct: 479 HKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINN 538
Query: 352 LCKAKRLPSASKLLLSCLKSGVR 374
LCK R+ ++ +++G R
Sbjct: 539 LCKEGRVAEGKDIMDMMVQTGQR 561
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 204/480 (42%), Gaps = 78/480 (16%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + + D + + M E G+ P ++ NS+I + + + ++ +M++ G
Sbjct: 216 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 275
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+++Y+ ++ L + D+A RV + M+ P + T+N +++G + + ++
Sbjct: 276 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 335
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT----- 176
R+F+ + G +P + N I L K GR A+ I + G P+ I+Y+T
Sbjct: 336 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWV 395
Query: 177 ---------IMKCCFRNRKYKLGLE------------------------ILSAMKRKGYT 203
+M N G+ I M+ KG
Sbjct: 396 CYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMI 455
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL----------------------DI 241
D + TVI++ +IGRL +A MV GV ++
Sbjct: 456 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKEL 515
Query: 242 VS--------------YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
+S ++++IN CKEG++ ++D M + G + T L++G C
Sbjct: 516 ISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYC 575
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 343
GN++ A L+ M IG + N Y +VD K+G+ID A+ VF M K S
Sbjct: 576 LVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSV 635
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
YS ++H L +A+R +A K+ ++SG + V+ GL + C EA + K+
Sbjct: 636 LYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 695
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 163/370 (44%), Gaps = 5/370 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+AY + D I M+ G+ PD VT+ ++I+ R L +L + M+++
Sbjct: 428 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 487
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT-FNIMLNGLCKNRYTDN 119
G+PP Y L+ G+ +A + +M+ D+ P F+ ++N LCK
Sbjct: 488 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAE 547
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+ + + G P +VT+N L++G C G + A +L + G PN Y T++
Sbjct: 548 GKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 607
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+N + L + M KG Y ++ + R A +M+ G +
Sbjct: 608 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTV 667
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
I +Y ++ C+ + A +LL+++ + D T I+I + K G + A+
Sbjct: 668 SIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 727
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
+ ++ G N++ Y+ ++ L K+ + A N+F S+E DS + +V L
Sbjct: 728 DAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNK 787
Query: 356 KRLPSASKLL 365
+ AS L
Sbjct: 788 AEVAKASNYL 797
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 127/255 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ YC + + + +L+ M GI P+ Y +L+ G +N + +L + +ML G
Sbjct: 570 LMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG 629
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P Y+ ++H LFQ + A ++F +MI T T+ ++L GLC+N TD A
Sbjct: 630 VKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEAN 689
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L +++T+NI+I + K GR + A+ + + G PN TY+ ++
Sbjct: 690 MLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNL 749
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ Y+ + ++++ G+ D ++ + + +A++Y+ + + + L+
Sbjct: 750 IKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEA 809
Query: 242 VSYNTLINLYCKEGK 256
+ + L +L+ +EGK
Sbjct: 810 STISLLASLFSREGK 824
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 151/339 (44%), Gaps = 7/339 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTY-NSLIAGATRNSLLSCSLDLLDEMLEM 60
LI C +++ M I P V Y +S+I + ++ D++D M++
Sbjct: 499 LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQT 558
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V ++NSLM +G +EA + M + P + +++G CKN D+A
Sbjct: 559 GQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 618
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +FR + G P V Y+I++ GL +A R A+ + E+ +SG + TY ++
Sbjct: 619 LTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGG 678
Query: 181 CFRNR---KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
RN + + LE L AM K FD + VI+A K+GR +EA + + + T G+
Sbjct: 679 LCRNNCTDEANMLLEKLFAMNVK---FDIITFNIVISAMFKVGRRQEAKELFDAISTYGL 735
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+I +Y+ +I KE E A L +EK G D ++ L + A
Sbjct: 736 VPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASN 795
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
+L + + + + ++GK I + +
Sbjct: 796 YLSIIGENNLTLEASTISLLASLFSREGKYREHIKLLPA 834
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 11/227 (4%)
Query: 153 RTARWILKELGDSGHAPNAI-TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
R RW H+P I TY ++ C R + LGL I+ + + G D F Y +
Sbjct: 162 RMDRWACPR-----HSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-S 215
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+I FVK G + +A +M+ GV I+ N++I CK +++ A ++ +M G
Sbjct: 216 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 275
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
D +T++++IDGLCK+ + A LE M + G N YN ++ G + ++
Sbjct: 276 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 335
Query: 332 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
VF+ M + +S +H L K R A + S + G +
Sbjct: 336 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPK 382
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHL 299
I +YN LI+ Y + + + ++ + K G D ++++ LI G K G + A L L
Sbjct: 176 IHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCLFL 234
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
E M + G + N I+ L K ++D A ++ + M D FTYS ++ LCK+
Sbjct: 235 EMMEQ-GVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKS 293
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
K + A ++L +++G R +++ G SG E+ ++
Sbjct: 294 KAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRV 337
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 174/355 (49%), Gaps = 7/355 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
I+ M+ AG SPDV ++ LI G ++ LD MLE G+ P+ YN+L+ CL
Sbjct: 15 AIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCL 74
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ G EA + M P ++NI+++G CK R + AL R +++ G P
Sbjct: 75 CKAGMLAEAESYLKRMP-QHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTP 133
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
Y+ +++ CK G + A + E+ G P+ + + ++ +R RK E+ +
Sbjct: 134 HAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRS 193
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M +G D Y T+IA K +L EA +E+M + V V+Y TLI+ CK +
Sbjct: 194 MNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFAR 253
Query: 257 LEAAYLLLDEMEKQGFECDK--YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
L+ AY + ++M + C + Y+ ILI+GLCKA A+ + M G + Y
Sbjct: 254 LQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTY 313
Query: 315 NCIVDRLGKDGKIDHAINV----FESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 365
N +++ L K+ A+ + + + + FTY ++ +LCK ++ A KLL
Sbjct: 314 NTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLL 368
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 182/416 (43%), Gaps = 50/416 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + L RM + +P+VV+YN +I G + + +L L EM E+G
Sbjct: 70 LISCLCKAGMLAEAESYLKRMPQ-HCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELG 128
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PP +Y+S++ + G +A VF +M P FN++L+GL + R A
Sbjct: 129 HPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEAR 188
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + G P++VTYN +I GLCK +L A ++L+ + +P +TYTT++
Sbjct: 189 ELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHL 248
Query: 182 FRNRKYKLGLEILSAMKRK--GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + + E+ M T + +I K R EA + ++M G+
Sbjct: 249 CKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISP 308
Query: 240 DIVSYNTLINLYCKEGKLEAA----YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
+V+YNTL+ KL+ A Y +LD++ +T+ ILI LCK ++ A
Sbjct: 309 TVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNM----FTYEILISSLCKTDQVEEA 364
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----------------- 338
L M GF +L+ + ++ RL + G++D A +++ M
Sbjct: 365 FKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDG 424
Query: 339 ----------------------VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
V D FTY +V LC + A KL+ ++ G
Sbjct: 425 ILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 142/322 (44%), Gaps = 7/322 (2%)
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+A + ++M +P + +++ G K+ + + G P + YN LI
Sbjct: 12 QAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLI 71
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
LCKAG L A LK + APN ++Y I+ + R + L L M+ G+
Sbjct: 72 SCLCKAGMLAEAESYLKRMPQHC-APNVVSYNIIIDGYCKARNIEKALAFLREMEELGHP 130
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
Y +++ +F K G + +A D +M G + DIV++N L++ + K+ A L
Sbjct: 131 PTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEAREL 190
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
M +G + D T+ +I GLCK + A LE M + Y ++D L K
Sbjct: 191 FRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCK 250
Query: 324 DGKIDHAINVFESME------VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
++ A VFE M + +++ +++ LCKA+R A ++ G+
Sbjct: 251 FARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTV 310
Query: 378 SAQKAVVDGLRHSGCRREAKKI 399
+++GL + ++A ++
Sbjct: 311 VTYNTLLEGLLSTAKLQDAMEL 332
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 5/153 (3%)
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I V+ + +A +E+M G D+ S+ LI + K G + LD M + G
Sbjct: 1 IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
+ + LI LCKAG + A +L+ M + N+ +YN I+D K I+ A+
Sbjct: 61 FPNAILYNNLISCLCKAGMLAEAESYLKRMPQ-HCAPNVVSYNIIIDGYCKARNIEKALA 119
Query: 333 VFESME----VKDSFTYSSMVHNLCKAKRLPSA 361
ME YSS+V + CK + A
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKA 152
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 197/438 (44%), Gaps = 37/438 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C D + ++M E G P+ ++ L+ G R S L+LL EM +
Sbjct: 61 VLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRL 120
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ YN+L+ + GK D+A ++ +M L+P TFN ++ LC + A
Sbjct: 121 GFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEA 180
Query: 121 LRMFRGLQKHGFV----PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
R+FR +Q + P ++TYN+++ G CK G L AR + +++ S + N +Y
Sbjct: 181 SRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNI 240
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
+ R K +L M G + + Y V+ K G L +A M M + G
Sbjct: 241 WLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSG 300
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
V D V+Y TL++ YC GK+ A +L EM + G + YT IL+ L K G I A
Sbjct: 301 VLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAE 360
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME------------------ 338
L+ MN+ G+ + N ++D L +GK+D AI + M
Sbjct: 361 ELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLV 420
Query: 339 ---------VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
+ D +YS+++ LCKA R+ A K + + ++ A+ D H
Sbjct: 421 DDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQ----PDSAIYDVFIH 476
Query: 390 SGCRREAKKIQSKIRMAK 407
S C+ KI S R+ K
Sbjct: 477 SFCKE--GKISSAFRVLK 492
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 203/475 (42%), Gaps = 66/475 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ YC+ G +L MR G SP+ V YN+LI+ + + L+DEM +
Sbjct: 96 ILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKD 155
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM----ICGDLTPCTATFNIMLNGLCKNRY 116
G+ PDV ++N+ + L GK EA+R+F+DM + G P T+N+ML G CK
Sbjct: 156 GLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGM 215
Query: 117 TDNALRMFRGLQ-----------------------------------KHGFVPELVTYNI 141
+ A +F ++ G P + +YNI
Sbjct: 216 LEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNI 275
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
++ GLCK G L AR +++ + SG P+ +TYTT++ K +L M R G
Sbjct: 276 VMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDG 335
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ + + ++ + K GR+ EA + +++M G +D V+ N +I+ C GKL+ A
Sbjct: 336 CSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAI 395
Query: 262 LLLDEMEKQGFEC-----------------------DKYTHTILIDGLCKAGNIKGARLH 298
+++ M G D +++ +I GLCKAG + A+
Sbjct: 396 EIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKK 455
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCK 354
M + Y+ + K+GKI A V + ME K TY+S++ L
Sbjct: 456 FIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGS 515
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
++ L+ + GV S V+ L G ++A + ++ IS
Sbjct: 516 KNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGIS 570
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 205/433 (47%), Gaps = 34/433 (7%)
Query: 1 MLIDAYCQF-VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
+++D C+ V FDA ++ M +G+ PD VTY +L+ G +S + ++L EM+
Sbjct: 275 IVMDGLCKNGVLFDA-RMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMR 333
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G P+ ++ N L++ L++ G+ EA + Q M T T NI+++GLC N D
Sbjct: 334 DGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDK 393
Query: 120 ALRMFRGLQKHGF-----------------------VPELVTYNILIKGLCKAGRLRTAR 156
A+ + G+ HG +P+L++Y+ +I GLCKAGR+ A+
Sbjct: 394 AIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAK 453
Query: 157 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 216
E+ P++ Y + + K +L M++KG Y ++I
Sbjct: 454 KKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGL 513
Query: 217 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
++ E +++M GV D+ YN +++ C+ G+++ A +LDEM ++G +
Sbjct: 514 GSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNI 573
Query: 277 YTHTILIDGLCKAGNIKGARLHLEY-MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
+ +ILI CKA + E +N G L Y+ + L G++ A +FE
Sbjct: 574 SSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEAL--YSLTFNELLVGGEVVKAKELFE 631
Query: 336 -----SMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
S +V + F Y ++ +LCK ++L AS +L + G ++ V+DGL
Sbjct: 632 TALDRSFDVGN-FLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKR 690
Query: 391 GCRREAKKIQSKI 403
G + EA ++ K+
Sbjct: 691 GNKHEADELAEKM 703
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 166/318 (52%), Gaps = 8/318 (2%)
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
PP ++ YN L+ + G+ D + + +DM+ ++P T TFN+++ LC + D+A
Sbjct: 18 PPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARE 77
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+F + + G P ++ IL++G C+AG +L E+ G +PN + Y T++
Sbjct: 78 LFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFC 137
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV----Q 238
+ K +++ M++ G + D + I+A G++ EA+ M D V Q
Sbjct: 138 KEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQ 197
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+I++YN ++ +CKEG LE A L ++M+ ++ ++ I + GL + G + A+L
Sbjct: 198 PNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLV 257
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 354
L+ M +G + N+ +YN ++D L K+G + A + M + D+ TY++++H C
Sbjct: 258 LKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCH 317
Query: 355 AKRLPSASKLLLSCLKSG 372
++ A+ +L ++ G
Sbjct: 318 TGKVSEANNVLREMMRDG 335
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 171/379 (45%), Gaps = 8/379 (2%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
R R P + YN L+ T+ + C L +M+ G+ P+ +++N L+ L G
Sbjct: 11 RFRFPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSG 70
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
D+A +F M P +F I++ G C+ +T L + +++ GF P V YN
Sbjct: 71 CLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYN 130
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
LI CK G+ A ++ E+ G +P+ +T+ + + K I M+
Sbjct: 131 TLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQID 190
Query: 201 GY----TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
+ Y ++ F K G L+EA E+M ++ SYN + + GK
Sbjct: 191 EVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGK 250
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
L A L+L EM G E + Y++ I++DGLCK G + AR+ + M G + Y
Sbjct: 251 LLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTT 310
Query: 317 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++ GK+ A NV M +++T + ++++L K R+ A +LL + G
Sbjct: 311 LLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKG 370
Query: 373 VRILKSAQKAVVDGLRHSG 391
I V+DGL ++G
Sbjct: 371 YVIDTVTCNIVIDGLCNNG 389
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 177/383 (46%), Gaps = 29/383 (7%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATR-NSLLSCSLDLLDEMLE 59
+++ +C+ + + +M+ + + +YN + G R LL L +L EM++
Sbjct: 205 LMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQL-VLKEMVD 263
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
MG+ P+V+SYN +M L + G +A + + M + P T T+ +L+G C
Sbjct: 264 MGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSE 323
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + R + + G P T NIL+ L K GR+ A +L+++ + G+ + +T ++
Sbjct: 324 ANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVID 383
Query: 180 CCFRNRKYKLGLEILSAM-----------------------KRKGYTFDGFGYCTVIAAF 216
N K +EI++ M RK D Y T+I+
Sbjct: 384 GLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGL 443
Query: 217 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
K GR+ EA +M+ +Q D Y+ I+ +CKEGK+ +A+ +L +MEK+G
Sbjct: 444 CKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTL 503
Query: 277 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
T+ LI GL I ++ M + G ++ YN ++ L + G++ A +V +
Sbjct: 504 QTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDE 563
Query: 337 MEVK----DSFTYSSMVHNLCKA 355
M K + ++S ++ CKA
Sbjct: 564 MLQKGISPNISSFSILIKAFCKA 586
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 7/236 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ I ++C+ + + +L M + G + + TYNSLI G + + L+DEM E
Sbjct: 473 VFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRER 532
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN---RYT 117
G+ PDV YN+++ L + G+ +A V +M+ ++P ++F+I++ CK
Sbjct: 533 GVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAV 592
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
D + + H +T+N L+ G G + A+ + + D Y +
Sbjct: 593 DEIFEIALNVCGHKEALYSLTFNELLVG----GEVVKAKELFETALDRSFDVGNFLYKDL 648
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
+ ++ K IL + KGY FD + VI K G EA + E+M+
Sbjct: 649 IDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMM 704
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 173/340 (50%), Gaps = 14/340 (4%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANR 87
P+ VTYN++IAG + +L+++ EM E G I PD ++Y +L+ ++G+ ++A +
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAK 204
Query: 88 VFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
VF +M+ G++ P +N ++ G C D AL+ + + G + TYN+L+ L
Sbjct: 205 VFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHAL 264
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
GR A +L+E+ +G +P+ TY ++ + K LE+ M RKG
Sbjct: 265 FMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATA 324
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y ++I AF + G+++E + V G++ D+V YN LIN +C G +E A+ ++ E
Sbjct: 325 VTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAE 384
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
MEK+ D T+ LI G C G + AR ++ M K G +L L K+G+
Sbjct: 385 MEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDLG--------LCKNGQ 436
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 362
D A N+ + M K D TY S++ L SA+
Sbjct: 437 GDDAENLMKEMVGKGITPDDSTYISLIEGLTTVDEQMSAA 476
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 161/368 (43%), Gaps = 49/368 (13%)
Query: 48 SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 107
+ SL ++ + +P V S + L+ L A +F D+ L CT TFNIM
Sbjct: 67 ATSLRFYAQLKSLSVPIPVASLHPLLSSL----PSAPAFALFADIYRLRLPLCTTTFNIM 122
Query: 108 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 167
L LC AL + R + + P VTYN +I G C GR++ A +++E+ + G
Sbjct: 123 LRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREMRERGG 178
Query: 168 -APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-YTFDGFGYCTVIAAFVKIGRLKEA 225
AP+ TY T++ + + + ++ M +G Y +I + G+L A
Sbjct: 179 IAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVA 238
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
Y E MV GV + + +YN L++ +G+ AY +L+EM++ G D +T+ ILI+G
Sbjct: 239 LQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILING 298
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV------------DRLGK---------- 323
CK GN K A E M++ G + Y ++ DRL K
Sbjct: 299 YCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPD 358
Query: 324 -------------DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
G ++ A + ME K D TY++++ C RL A L+
Sbjct: 359 VVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLID 418
Query: 367 SCLKSGVR 374
K G++
Sbjct: 419 EMTKRGIQ 426
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 136/286 (47%), Gaps = 9/286 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
LI +C+ + + + M G ++P V YN+LI G L +L ++M++
Sbjct: 189 LISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQR 248
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ V +YN L+H LF G+ +A V ++M L+P T+NI++NG CK A
Sbjct: 249 GVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKA 308
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F + + G VTY LI + G+++ + K G P+ + Y ++
Sbjct: 309 LEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINS 368
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ EI++ M++K D Y T+I F +GRL EA +++M G+Q D
Sbjct: 369 HCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPD 428
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ CK G+ + A L+ EM +G D T+ LI+GL
Sbjct: 429 LG--------LCKNGQGDDAENLMKEMVGKGITPDDSTYISLIEGL 466
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 8/179 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ + + M G+ VTY SLI +R + + L ++
Sbjct: 294 ILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKK 353
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PDV YN+L++ G + A + +M + P T+N ++ G C D A
Sbjct: 354 GIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEA 413
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+ + K G P+L GLCK G+ A ++KE+ G P+ TY ++++
Sbjct: 414 RGLIDEMTKRGIQPDL--------GLCKNGQGDDAENLMKEMVGKGITPDDSTYISLIE 464
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 208/463 (44%), Gaps = 76/463 (16%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++A C+ + T L+ ++E G+ PD+VTYN+LI+ + L+ + +L+ M
Sbjct: 230 IMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSK 289
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK------- 113
G P V++YN++++ L + GK + A VF +M+ L+P + T+ +L CK
Sbjct: 290 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVET 349
Query: 114 -NRYTD---------------------------NALRMFRGLQKHGFVPELVTYNILIKG 145
N ++D AL F +++ G +P+ V Y ILI+G
Sbjct: 350 ENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 409
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
C+ G + A + E+ G A + +TY TI+ + + ++ + M +G D
Sbjct: 410 YCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPD 469
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL------------------ 247
+ +I K+G L+ A + ++M ++LD+V+YNTL
Sbjct: 470 SYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWA 529
Query: 248 -----------------INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+N C +G L A+ + DEM + + +I G C++G
Sbjct: 530 DMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSG 589
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME------VKDSFT 344
N + LE M GF + +YN ++ K+ + A + + ME V D FT
Sbjct: 590 NASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFT 649
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
Y+S++H C+ ++ A +L ++ GV +S ++++G
Sbjct: 650 YNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGF 692
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 175/367 (47%), Gaps = 4/367 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + + + + I + +G+ +V T N ++ ++ + L E+ E G
Sbjct: 196 LIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKG 255
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ +YN+L+ G +EA + M +P T+N ++NGLCK+ + A
Sbjct: 256 VYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAK 315
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + + G P+ TY L+ CK G I ++ P+ + ++++M
Sbjct: 316 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLF 375
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ L +++K G D Y +I + + G + EA + +M+ G +D+
Sbjct: 376 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDV 435
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNT+++ CK L A L +EM ++G D YT TILIDG CK GN++ A +
Sbjct: 436 VTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKK 495
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKR 357
M + ++ YN ++D GK G ID A ++ M K+ ++S +V+ LC
Sbjct: 496 MKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGH 555
Query: 358 LPSASKL 364
L A ++
Sbjct: 556 LSEAFRV 562
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 166/339 (48%), Gaps = 41/339 (12%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
+ D N ++EAG+ PD V Y LI G R ++S +++L +EML+ G DV +YN
Sbjct: 380 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYN 439
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+++H L + EA+++F +M L P + T I+++G CK NA+ +F+ +++
Sbjct: 440 TILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEK 499
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT--------------- 175
++VTYN L+ G K G + TA+ I ++ P I+++
Sbjct: 500 RIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEA 559
Query: 176 --------------TIMKC-------CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
T+M C C R+ G L M +G+ D Y T+I
Sbjct: 560 FRVWDEMISKSIKPTVMICNSMIKGYC-RSGNASDGEIFLEKMISEGFVPDCISYNTLIY 618
Query: 215 AFVKIGRLKEATDYMEQMVTD--GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
FVK + +A +++M G+ D+ +YN++++ +C+E +++ A +L +M ++G
Sbjct: 619 GFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGV 678
Query: 273 ECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSN 310
D+ T+T LI+G N+ A R H E + + GF +
Sbjct: 679 NPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQR-GFSPD 716
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 161/343 (46%), Gaps = 4/343 (1%)
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N+L+ L ++G + A R++Q++ + T NIM+N LCK+ + +Q+
Sbjct: 194 NALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQE 253
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G P++VTYN LI G + A ++ + G +P TY T++ ++ KY+
Sbjct: 254 KGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYER 313
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
E+ + M R G + D Y +++ K G E + M + V D+V ++++++
Sbjct: 314 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMS 373
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
L+ + G L+ A + + +++ G D +TILI G C+ G I A M + G
Sbjct: 374 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAM 433
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
++ YN I+ L K + A +F M + DS+T + ++ CK L +A +L
Sbjct: 434 DVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELF 493
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+ +++ ++DG G AK+I + + +I
Sbjct: 494 KKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 536
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 94/197 (47%), Gaps = 4/197 (2%)
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+I FV+ +L+EA + + + G + I + N LI + G +E A+ + E+ + G
Sbjct: 161 LIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSG 220
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
+ YT I+++ LCK G ++ L + + G ++ YN ++ G ++ A
Sbjct: 221 VGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAF 280
Query: 332 NVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ +M K +TY+++++ LCK + A ++ L+SG+ + ++++
Sbjct: 281 ELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 340
Query: 388 RHSGCRREAKKIQSKIR 404
G E + I S +R
Sbjct: 341 CKKGDAVETENIFSDMR 357
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 168/357 (47%), Gaps = 4/357 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D Y I RM + G PD+VTY LI L + +L +M G PD Y +L
Sbjct: 279 DEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITL 338
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ G D + M P TF I+++ LCK R D A F ++K G
Sbjct: 339 LDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGI 398
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+P L TYN LI GL +AGR+ A +L + G P A TY T + ++ + +E
Sbjct: 399 LPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVE 458
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
MK KG + + + ++GRL+EA + +G+ D V+YN ++ Y
Sbjct: 459 TFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYS 518
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K G+++ A LL EM + G E D LID L KAG + A + M + +
Sbjct: 519 KVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVV 578
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
YN ++ LGK+G++ AI +FESM K ++ ++++++ CK + A K+
Sbjct: 579 TYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMF 635
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 191/431 (44%), Gaps = 39/431 (9%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ M++ I D+ TY ++ + L +L++M + G + +SYN L+H L
Sbjct: 144 VFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLI 203
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
Q G EA V++ M+ L P T++ ++ L K R ++ + + + ++ G P +
Sbjct: 204 QSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVY 263
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T+ I I+ L +AG++ A I + + D G P+ +TYT ++ + + E+ M
Sbjct: 264 TFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKM 323
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K G+ D Y T++ F G L ++ QM DG D+V++ L+++ CK
Sbjct: 324 KANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDF 383
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A+ D M KQG + +T+ LI GL +AG I+ A L+ M +G Y
Sbjct: 384 DEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITF 443
Query: 318 VDRLGKDGKIDHAINVFESMEVK------------------------------------- 340
+D GK G+ A+ FE M+ K
Sbjct: 444 IDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGL 503
Query: 341 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
DS TY+ M+ K ++ A LL +++G +++D L +G EA +
Sbjct: 504 APDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQ 563
Query: 399 IQSKIRMAKIS 409
+ +++ K+S
Sbjct: 564 MFDRMKDMKLS 574
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 154/326 (47%), Gaps = 1/326 (0%)
Query: 15 GYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 73
Y I ++ ++ GISP + +YN LI + DL +M +G PD +++N L+
Sbjct: 771 AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830
Query: 74 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 133
+ GK E ++++MI P T+NI+++ L K+ D AL F L F
Sbjct: 831 AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFR 890
Query: 134 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 193
P TY LI GL K GRL A + +E+ D G PN + ++ + + ++
Sbjct: 891 PTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQL 950
Query: 194 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 253
M +G D Y ++ GR+ EA Y ++ + G+ D ++YN +IN K
Sbjct: 951 FKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGK 1010
Query: 254 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
++E A L +EM +G D YT+ L+ L AG ++ A+ E + G + ++
Sbjct: 1011 SQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFT 1070
Query: 314 YNCIVDRLGKDGKIDHAINVFESMEV 339
YN ++ +HA V+++M V
Sbjct: 1071 YNALIRGYSLSENPEHAYTVYKNMMV 1096
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 172/363 (47%), Gaps = 3/363 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D + F D ++M G PDVVT+ L+ + + D M + G
Sbjct: 338 LLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQG 397
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P++ +YN+L+ L + G+ ++A ++ M + P T+ ++ K+ T A+
Sbjct: 398 ILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAV 457
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F ++ G VP +V N + L + GRLR A+ + L ++G AP+++TY +MKC
Sbjct: 458 ETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCY 517
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + +LS M R G D ++I + K GR+ EA ++M + +
Sbjct: 518 SKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTV 577
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTL++ KEG+++ A L + M + + + L+D CK ++ A
Sbjct: 578 VTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSK 637
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---DSFTYSSMVHNLCKAKRL 358
M + ++ YN ++ L K+ K++HA F ++ D T +++ L K ++
Sbjct: 638 MTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQI 697
Query: 359 PSA 361
A
Sbjct: 698 GDA 700
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 148/304 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ FD + + MR+ GI P++ TYN+LI G R + +L LLD M +
Sbjct: 372 ILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESV 431
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P ++Y + + + G+ +A F+ M + P N L L + A
Sbjct: 432 GVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREA 491
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
MF GL+++G P+ VTYN+++K K G++ A +L E+ +G P+ I +++
Sbjct: 492 KTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDS 551
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ + ++ MK + Y T+++ K GR+++A + E M+ +
Sbjct: 552 LYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPN 611
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+S+NTL++ +CK ++E A + +M + D T+ +I GL K + A
Sbjct: 612 TISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFH 671
Query: 301 YMNK 304
+ K
Sbjct: 672 QLKK 675
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 88/178 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID + + + M + G P+ +N LI G + + L M+ G
Sbjct: 899 LIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEG 958
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+ SY L+ CL G+ DEA F ++ L P +N ++NGL K++ + AL
Sbjct: 959 IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEAL 1018
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
++ ++ G VP+L TYN L+ L AG + A+ + +EL +G P+ TY +++
Sbjct: 1019 ALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIR 1076
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 142/347 (40%), Gaps = 39/347 (11%)
Query: 101 TATFNIMLNGL-------------------CKNRYTDNALRMFRGL-------------- 127
T T N ML L R D L +F+ L
Sbjct: 122 TETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLN 181
Query: 128 --QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 185
+K GFV +YN LI L ++G A + + + G P+ TY+ +M + R
Sbjct: 182 KMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKR 241
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
++ + +L M+ G + + + I + G++ EA + +M +G D+V+Y
Sbjct: 242 DSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYT 301
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
LI+ C G+LE A L +M+ G + D+ + L+D G++ + M
Sbjct: 302 VLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEAD 361
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 361
G+ ++ + +VD L K D A F+ M + + TY++++ L +A R+ A
Sbjct: 362 GYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDA 421
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
KLL + GV+ +D SG +A + K++ I
Sbjct: 422 LKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGI 468
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 72/139 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C D N ++ G+ PD + YN +I G ++ + +L L +EM
Sbjct: 968 ILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNR 1027
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD+++YNSLM L G ++A R+++++ L P T+N ++ G + ++A
Sbjct: 1028 GIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHA 1087
Query: 121 LRMFRGLQKHGFVPELVTY 139
+++ + G P + TY
Sbjct: 1088 YTVYKNMMVDGCNPNIGTY 1106
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 168/339 (49%), Gaps = 8/339 (2%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M +G PD T+NSLI G R + + + DL D+M G DV SY +L+ L + G+
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
DEA +F +M D+ + ++ GLC + L M R +++ G+ P Y
Sbjct: 61 IDEAVELFGEMDQPDM----HMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
++ C+ + + A +L+E+ + G AP +T T ++ + + L +L MK +G
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ + Y ++ F G++ +A + +M GV D V+YN LI C +G +E+A+
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
LL ME G D+YT+ LI+ LCK G A + + G N +N +++ L
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 296
Query: 322 GKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
K GK D A E M D++TYSS + +LCK K
Sbjct: 297 CKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMK 335
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 199/420 (47%), Gaps = 23/420 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ +C T+LN+MR G++PD VTYN LI G + + + LL M G
Sbjct: 187 LVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDG 246
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D ++YN+L++ L + G+ D+A +F + + P TFN ++NGLCK+ D A
Sbjct: 247 LIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAW 306
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P+ TY+ I+ LCK + + E+ P+ + YT ++
Sbjct: 307 KFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKL 366
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R Y L M G D Y T + A+ GRL EA + + +M +GV +D
Sbjct: 367 LKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDT 426
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK------------A 289
++YNTL++ + G+ + A +L +M +++T+ IL+ L + A
Sbjct: 427 MAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPA 486
Query: 290 GNIKGARLH-----LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT 344
G K L + M K F N Y+ I++ +DG+ + A ++ M+ +DS +
Sbjct: 487 GVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMK-EDSIS 545
Query: 345 -----YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
Y+++V CK+KR A L+ S ++ G + + ++ GL G +AK+I
Sbjct: 546 LNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEI 605
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 169/359 (47%), Gaps = 4/359 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D C+ +L M E G++P VVT ++I + +S +L +L+ M G
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+VW+YN+L+ GK +A + M + P T+N+++ G C + + ++A
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ R ++ G + + TYN LI LCK GR A + L G PNA+T+ +++
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 296
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ K + + L M G T D + Y + I K+ +E ++ +M+ V+
Sbjct: 297 CKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPST 356
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y +I+ KE EM G D T+T + C G + A L
Sbjct: 357 VNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLME 416
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
M+K G + AYN ++D G+ DHA+++ + M V + FTY ++ +L + +
Sbjct: 417 MSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMR 475
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 188/423 (44%), Gaps = 41/423 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE----- 56
LI YC+ D + ++M G + DVV+Y +LI G + +++L E
Sbjct: 16 LIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPD 75
Query: 57 --------------------------MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 90
M E+G P +Y +++ + K EA + Q
Sbjct: 76 MHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQ 135
Query: 91 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 150
+M L PC T ++N CK +ALR+ ++ G P + TYN L++G C G
Sbjct: 136 EMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEG 195
Query: 151 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
++ A +L ++ G P+A+TY +++ + + +L M+ G D + Y
Sbjct: 196 KVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYN 255
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
+I A K GR +A + + T G++ + V++N+LIN CK GK + A+ L++M
Sbjct: 256 ALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSA 315
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI---GFDSNLEAYNCIVDRLGKDGKI 327
G D YT++ I+ LCK +KG++ L ++ ++ + Y ++ +L K+
Sbjct: 316 GCTPDTYTYSSFIEHLCK---MKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNY 372
Query: 328 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
+ M D TY++ + C RL A +L+ K+GV + A +
Sbjct: 373 GLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTL 432
Query: 384 VDG 386
+DG
Sbjct: 433 MDG 435
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 147/304 (48%), Gaps = 8/304 (2%)
Query: 92 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
M+ P TFN ++ G C+ D A +F + GF ++V+Y LI+GLC+AGR
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
+ A + E+ P+ Y ++K + + GL +L MK G+ Y
Sbjct: 61 IDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
V+ + + KEA + +++M G+ +V+ +IN YCKEG++ A +L+ M+ +G
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
+ + +T+ L+ G C G + A L M G + + YN ++ DG I+ A
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236
Query: 332 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ ME + D +TY+++++ LCK R A L S G++ ++++GL
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 296
Query: 388 RHSG 391
SG
Sbjct: 297 CKSG 300
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 154/392 (39%), Gaps = 90/392 (22%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+A C+ D ++ + + GI P+ VT+NSLI G ++ + L++M+ G
Sbjct: 257 LINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAG 316
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD ++Y+S + L ++ E +M+ D+ P T + I+++ L K R
Sbjct: 317 CTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVA 376
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL------------------- 162
R + + G P++VTY ++ C GRL A +L E+
Sbjct: 377 RTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGH 436
Query: 163 ---GDSGHA-------------PNAITYTTIMKCCFRNRKYKLGLEILSA---------- 196
G + HA PN TY +++ R R + L + A
Sbjct: 437 ASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTD 496
Query: 197 -------MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
MK+ + + Y +++ F + GR +EAT + M D + L+ Y L+
Sbjct: 497 VFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVT 556
Query: 250 LYCKEGKLEAAYLLLDEMEKQGF-----------------------------------EC 274
+CK + A++L+ M + GF
Sbjct: 557 CFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSP 616
Query: 275 DKYTHTILIDGLCKAGNIKGAR---LHLEYMN 303
D+ ++IDGL K G+ +R + LE MN
Sbjct: 617 DEIVWKVIIDGLIKKGHSDISREMIIMLERMN 648
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 5/139 (3%)
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M + G+ D YT LI G C+ + AR + M GF ++ +Y +++ L + G+
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 327 IDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
ID A+ +F M+ D Y+++V LC A+R +L + G R A AVVD
Sbjct: 61 IDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVD- 119
Query: 387 LRHSGCR-REAKKIQSKIR 404
R CR R+AK+ + ++
Sbjct: 120 FR---CRERKAKEAEEMLQ 135
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 182/385 (47%), Gaps = 4/385 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P +++L + +L ++ +M + P S N L+H +LGK D+ R
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
F+DMI P T+NIM++ +CK + A +F ++ G VP+ VTYN +I G K
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
GRL +E+ D P+ ITY ++ C + K +GLE MK G +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y T++ AF K G +++A + M G+ + +Y +LI+ CK G L A+ L +EM
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
+ G E + T+T LIDGLC A +K A M+ G NL +YN ++ K +D
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 329 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 384
A+ + ++ + D Y + + LC +++ +A ++ + G++ ++
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 385 DGLRHSGCRREAKKIQSKIRMAKIS 409
D SG E + +++ I
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIE 574
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 202/413 (48%), Gaps = 7/413 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ +A + M+ G+ PD VTYNS+I G + L ++ +EM +M
Sbjct: 267 IMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDM 326
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV +YN+L++C + GK +++M L P +++ +++ CK A
Sbjct: 327 CCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQA 386
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + +++ G VP TY LI CK G L A + E+ G N +TYT ++
Sbjct: 387 IKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDG 446
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K E+ M G + Y +I FVK + A + + ++ G++ D
Sbjct: 447 LCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPD 506
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++ Y T I C K+EAA ++++EM++ G + + +T L+D K+GN L+
Sbjct: 507 LLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLD 566
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-----VKDSFTYSSMVHNLCKA 355
M ++ + + + ++D L K+ + A++ F + ++ +++M+ LCK
Sbjct: 567 EMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKD 626
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
++ +A+ L ++ G+ ++A +++DG G EA ++ K MA+I
Sbjct: 627 NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK--MAEI 677
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 167/337 (49%), Gaps = 1/337 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+DA+C+ MR G+ P+ TY SLI + LS + L +EML++G
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ +V +Y +L+ L + EA +F M + P A++N +++G K + D AL
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L+ G P+L+ Y I GLC ++ A+ ++ E+ + G N++ YTT+M
Sbjct: 493 ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 552
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLD 240
F++ GL +L MK +C +I K + +A DY ++ D G+Q +
Sbjct: 553 FKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQAN 612
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +I+ CK+ ++EAA L ++M ++G D+ +T L+DG K GN+ A +
Sbjct: 613 AAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRD 672
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M +IG +L AY +V L ++ A + E M
Sbjct: 673 KMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 709
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 160/372 (43%), Gaps = 54/372 (14%)
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD-------------------- 96
M G V SY + H LF +AN V ++M+
Sbjct: 133 MTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGF 192
Query: 97 ------------------------------LTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
+ P T + N +L+ K TD+ R F+
Sbjct: 193 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 252
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
+ G P + TYNI+I +CK G + AR + +E+ G P+ +TY +++ + +
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
+ MK D Y +I F K G+L ++ +M +G++ ++VSY+T
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
L++ +CKEG ++ A +M + G ++YT+T LID CK GN+ A M ++G
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSAS 362
+ N+ Y ++D L ++ A +F M+ + + +Y++++H KAK + A
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 363 KLLLSCLKSGVR 374
+LL G++
Sbjct: 493 ELLNELKGRGIK 504
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 112/242 (46%), Gaps = 1/242 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + + + D +LN ++ GI PD++ Y + I G + + +++EM E G
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I + Y +LM F+ G P E + +M D+ TF ++++GLCKN+ A+
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 597
Query: 122 RMF-RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
F R G + +I GLCK ++ A + +++ G P+ YT++M
Sbjct: 598 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 657
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+ L + M G D Y +++ +L++A ++E+M+ +G+ D
Sbjct: 658 NFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Query: 241 IV 242
V
Sbjct: 718 EV 719
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 188/366 (51%), Gaps = 4/366 (1%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G+ P+ ++N LI G S + +LD +++M E G PD SYN+++ L + EA
Sbjct: 208 GVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEA 267
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+ DM L+P T+N+++ G C+ A ++ + ++ +P + TYN+L+ G
Sbjct: 268 RDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNG 327
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
C G++ A I E+ P+ +TY T++ C + R ++ M +KG +
Sbjct: 328 FCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCN 387
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y ++ K G + EAT +++M +G+ D V+YNTLI YCK GK+ A+ ++D
Sbjct: 388 AVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMD 447
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM +G + D +T ++ LC + A L +K G+ + +Y ++ KD
Sbjct: 448 EMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDE 507
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
K D A+N+++ M+ + + TY+S++ LC+++++ A L L++G+ ++
Sbjct: 508 KGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYN 567
Query: 382 AVVDGL 387
++ G
Sbjct: 568 IIIHGF 573
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 189/412 (45%), Gaps = 39/412 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
ML+ YC+ ++ M + P V TYN L+ G + + + + DEM +M
Sbjct: 288 MLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKM 347
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PDV +YN+L+ Q E + ++M + T+NI+L +CK A
Sbjct: 348 NVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEA 407
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++++G P+ VTYN LI CKAG++ A ++ E+ G + T TI+ C
Sbjct: 408 TTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHC 467
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK---------------------- 218
+K +L + ++GY D Y +I + K
Sbjct: 468 LCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPS 527
Query: 219 -------IG------RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
IG ++ +A D + +M+ +G+ D +YN +I+ +C EG +E A+ +
Sbjct: 528 TITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHN 587
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM + F+ D YT IL+ GLC+ G ++ A + G D ++ YN I+ L K+G
Sbjct: 588 EMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEG 647
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
K ++A ++ ME K D +TY ++ L A R+ A + L ++SG+
Sbjct: 648 KFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGI 699
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 188/389 (48%), Gaps = 12/389 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ C+ + T L++M E G+SPD VTYN+LI + + + ++DEM
Sbjct: 393 IILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSK 452
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ D W+ N+++HCL K DEA + ++ I++ G K+ D A
Sbjct: 453 GLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRA 512
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L ++ +++ +P +TYN +I GLC++ ++ A L E+ ++G P+ TY I+
Sbjct: 513 LNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHG 572
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + M + D + ++ + G L++A +V+ G +D
Sbjct: 573 FCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDID 632
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YNT+I+ CKEGK E AY LL EME + D+YT+ ++I L AG IK A
Sbjct: 633 VVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTL 692
Query: 301 YMNKIGF--DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRL 358
M + G D NL +LGK G+ V E + K S YS ++ LC +
Sbjct: 693 KMVESGIVHDQNL--------KLGK-GQNVLTSEVSEHFDFK-SIAYSDQINELCNQHKY 742
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGL 387
A L + K GV + K +++GL
Sbjct: 743 KDAMHLFVEVTKEGVALNKYTYLNLMEGL 771
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 162/327 (49%), Gaps = 7/327 (2%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE---ANRVFQDMICGDLTPCTATFNIMLN 109
+ ++M + P++ + N+LM+ L + A +V +D I + P T +FNI++
Sbjct: 162 IFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIY 221
Query: 110 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 169
G C +AL + + G VP+ V+YN ++ L K L+ AR +L ++ G +P
Sbjct: 222 GYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSP 281
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
N TY ++ R K +++ M R + Y ++ F G++ EA
Sbjct: 282 NKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIR 341
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
++M V D+V+YNTLI+ + Y L++EM+K+G +C+ T+ I++ +CK
Sbjct: 342 DEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKK 401
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 345
GN+ A L+ M + G + YN ++ K GK+ A + + M K D++T
Sbjct: 402 GNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTL 461
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSG 372
++++H LC K+L A LL S K G
Sbjct: 462 NTILHCLCVEKKLDEAYNLLCSASKRG 488
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 7/201 (3%)
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN---LYCKEGKLEAAYLLLDEM 267
T I A+V++ + AT +M + ++++ NTL+N Y + A +L +
Sbjct: 145 TSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDS 204
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
K G + + ILI G C +K A + M++ G + +YN I+D L K +
Sbjct: 205 IKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLL 264
Query: 328 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
A ++ M+ K + TY+ +V C+ L A+K++ ++ + +
Sbjct: 265 QEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNML 324
Query: 384 VDGLRHSGCRREAKKIQSKIR 404
V+G + G EA +I+ ++
Sbjct: 325 VNGFCNDGKIDEAFRIRDEME 345
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 191/400 (47%), Gaps = 4/400 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ + CQ F+ ++ M G SP+V +Y+ LIAG R + + +LL+EM++ G
Sbjct: 58 LLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGG 117
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +Y SL+ L ++GK EA +F M+ P +N++++G K A
Sbjct: 118 HQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAY 177
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+F + + G +P + TYN L+ G + G + + K++ G PN T+ ++
Sbjct: 178 RLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGF 237
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + M+ G D Y T++ G+ EA + +M+ GV DI
Sbjct: 238 CKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDI 297
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
VSYN LI+ Y K G L+ A L E+ K G E D ++++ +ID LC+AG + A + +
Sbjct: 298 VSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKD 357
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G + +V L + ++ + +F++M V Y+ +++ LCKAKR
Sbjct: 358 MIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKR 417
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
++ + G K +++ LR S + A+
Sbjct: 418 SDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKEAAE 457
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 172/362 (47%), Gaps = 4/362 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D Y N M AG P+ TY L+ + + + M G P+V+SY+ L
Sbjct: 34 DHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSIL 93
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ L + K DEA + +MI G P T+ +L+GLCK A+ +F + G
Sbjct: 94 IAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGC 153
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P+ V YN+LI G K G + A + +E+ + G P TY +++ R ++
Sbjct: 154 PPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQS 213
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ M R+G + F + ++ F K+G + EA +M + G D+VSYNTL+ C
Sbjct: 214 LFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMC 273
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
+GK A LL EM + G D ++ ILIDG K+G + A + K G + +
Sbjct: 274 SKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAF 333
Query: 313 AYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
+Y+ I+D L + GK+ A VF+ M D+ +V LC+ +RL + +L +
Sbjct: 334 SYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAM 393
Query: 369 LK 370
+K
Sbjct: 394 VK 395
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 175/367 (47%), Gaps = 43/367 (11%)
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
SYN L+ L + G+ D + DM+ P T T+ +L LC+ + + A +FRG+
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
G P + +Y+ILI GLC+ ++ A +L E+ D GH PN +TY +++ + K
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
K +++ S M +G DG Y +I F K G + EA E+M+ G + +YN+L
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHLEY----- 301
++ + ++G+ L +M +QG + +T L+DG CK G+ ++ RL LE
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258
Query: 302 -----------------------------MNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
M + G ++ +YN ++D K G +DHAI
Sbjct: 259 PPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIK 318
Query: 333 VF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
+F +S D+F+YS+++ LC+A ++ +A + + +G + AVV L
Sbjct: 319 LFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANG----SAPDAAVVIPLV 374
Query: 389 HSGCRRE 395
CR E
Sbjct: 375 IGLCRGE 381
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 81/204 (39%), Gaps = 7/204 (3%)
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
Y Y ++ K GR M+ G + +Y L+ C+ + E A
Sbjct: 13 YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEAR 72
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+ M QG + ++++ILI GLC+ + A L M G N+ Y ++ L
Sbjct: 73 SVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGL 132
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
K GK+ A+++F M + D Y+ ++ K + A +L L+ G
Sbjct: 133 CKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTV 192
Query: 378 SAQKAVVDGLRHSGCRREAKKIQS 401
+++ G G E ++QS
Sbjct: 193 FTYNSLLSGFSRKG---EFGRVQS 213
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 194/413 (46%), Gaps = 28/413 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD------ 55
L+ AYC Y +L +M + G P V YN LI G+ S + DLLD
Sbjct: 337 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILI-GSICGDKDSLNFDLLDLAEKAY 395
Query: 56 -EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
EML G+ + + +S CL GK ++A V ++MI P T+T++ +LN LC
Sbjct: 396 SEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNA 455
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
+ A +F +++ G V ++ TY I++ CKAG + AR E+ + G PN +TY
Sbjct: 456 SKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTY 515
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM-- 232
T ++ + +K E+ M +G + Y +I K G++++A E+M
Sbjct: 516 TALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCG 575
Query: 233 ---VTD-----------GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
V D + ++V+Y L++ +CK ++E A LLD M +G E ++
Sbjct: 576 SKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIV 635
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+ LIDGLCK G + A+ M++ GF + L Y+ ++DR K + D A V M
Sbjct: 636 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 695
Query: 339 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ Y+ M+ LCK + A KL+ + G + A++DG
Sbjct: 696 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 748
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 202/431 (46%), Gaps = 61/431 (14%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D++C+ + N MRE G +P+VVTY +LI + +S + +L + ML
Sbjct: 482 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 541
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICG--DLT---------------PCT 101
G P++ +Y++L+ HC + G+ ++A ++F+ M CG D+ P
Sbjct: 542 GCLPNIVTYSALIDGHC--KAGQVEKACQIFERM-CGSKDVPDVDMYFKQYDDNSERPNV 598
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
T+ +L+G CK+ + A ++ + G P + Y+ LI GLCK G+L A+ + E
Sbjct: 599 VTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE 658
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ + G TY++++ F+ ++ L ++LS M + Y +I K+G+
Sbjct: 659 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 718
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
EA M+ M G Q ++V+Y +I+ + GK+E LL+ M +G + T+ +
Sbjct: 719 TDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV 778
Query: 282 LIDGLCKAGNIKGARLHLEYM------------------------------NKIGFDSN- 310
LID CK G + A LE M ++IG D
Sbjct: 779 LIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTA 838
Query: 311 --LEAYNCIVDRLGKDGKIDHAINVFESME------VKDSFTYSSMVHNLCKAKRLPSAS 362
L Y ++D L K +++ A+ + E + V S TY+S++ +LC A ++ +A
Sbjct: 839 PFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAF 898
Query: 363 KLLLSCLKSGV 373
+L K GV
Sbjct: 899 QLFSEMTKKGV 909
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 165/353 (46%), Gaps = 16/353 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C + + + M+ G+ DV TY ++ + L+ + +EM E+G
Sbjct: 448 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 507
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +Y +L+H + K AN +F+ M+ P T++ +++G CK + A
Sbjct: 508 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 567
Query: 122 RMFRGLQKHGFVPEL----------------VTYNILIKGLCKAGRLRTARWILKELGDS 165
++F + VP++ VTY L+ G CK+ R+ AR +L +
Sbjct: 568 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 627
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
G PN I Y ++ + K E+ + M G+ + Y ++I + K+ R A
Sbjct: 628 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 687
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ + +M+ + ++V Y +I+ CK GK + AY L+ ME++G + + T+T +IDG
Sbjct: 688 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 747
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
G I+ LE M G N Y ++D K+G +D A N+ E M+
Sbjct: 748 FGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 800
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 188/409 (45%), Gaps = 23/409 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ F+ LNRMR P+VVTY++L+ G L +L+ M+ G
Sbjct: 267 LISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEG 326
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYT--- 117
P +NSL+H G A ++ + M+ CG + P +NI++ +C ++ +
Sbjct: 327 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM-PGYVVYNILIGSICGDKDSLNF 385
Query: 118 ---DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D A + + + G V + + + LC AG+ A +++E+ G P+ TY
Sbjct: 386 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 445
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
+ ++ K +L + MKR G D + Y ++ +F K G +++A + +M
Sbjct: 446 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 505
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G ++V+Y LI+ Y K K+ A L + M +G + T++ LIDG CKAG ++
Sbjct: 506 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 565
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCK 354
A E M +++ Y D ++ E + TY +++ CK
Sbjct: 566 ACQIFERMCGSKDVPDVDMYFKQYD---------------DNSERPNVVTYGALLDGFCK 610
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ R+ A KLL + G + A++DGL G EA+++++++
Sbjct: 611 SHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 659
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 161/332 (48%), Gaps = 4/332 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D +C+ + +L+ M G P+ + Y++LI G + L + ++ EM E G
Sbjct: 604 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 663
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P +++Y+SL+ F++ + D A++V M+ P + M++GLCK TD A
Sbjct: 664 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 723
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + +++ G P +VTY +I G G++ T +L+ +G G APN +TY ++ C
Sbjct: 724 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 783
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N + +L MK+ + GY VI F K E+ ++++ D +
Sbjct: 784 CKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFL 841
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY--THTILIDGLCKAGNIKGARLHL 299
Y LI+ K +LE A LL+E+ Y T+ LI+ LC A ++ A
Sbjct: 842 SVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLF 901
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
M K G ++++ ++ L ++ KI A+
Sbjct: 902 SEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 933
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 174/411 (42%), Gaps = 50/411 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ SF L R+++ P TYN LI + L + + EM
Sbjct: 164 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 223
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ D ++ + L ++GK EA + + + P T + +++GLC+ + A
Sbjct: 224 NLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEA 280
Query: 121 LRMFRGLQKHGFVPELVTY-----------------------------------NILIKG 145
+ ++ +P +VTY N L+
Sbjct: 281 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 340
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL-------SAMK 198
C +G A +LK++ GH P + Y ++ ++ L ++L S M
Sbjct: 341 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD-SLNFDLLDLAEKAYSEML 399
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
G + + G+ ++A + +M+ G D +Y+ ++N C K+E
Sbjct: 400 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 459
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A+LL +EM++ G D YT+TI++D CKAG I+ AR M ++G N+ Y ++
Sbjct: 460 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 519
Query: 319 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
K K+ +A +FE+M + + TYS+++ CKA ++ A ++
Sbjct: 520 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 570
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 178/414 (42%), Gaps = 48/414 (11%)
Query: 35 NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 94
N L+ RN S +L+ L + + P +YN L+ + + D A+ + ++M
Sbjct: 163 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 222
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
+L T LCK AL + ++ FVP+ V Y LI GLC+A
Sbjct: 223 ANLRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEE 279
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-----YTFDGF-- 207
A L + + PN +TY+T++ C ++ +L+ M +G F+
Sbjct: 280 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 339
Query: 208 GYCT---------VIAAFVKIGRL----------------KEATDY---------MEQMV 233
YCT ++ VK G + K++ ++ +M+
Sbjct: 340 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEML 399
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
GV L+ ++ ++ C GK E A+ ++ EM QGF D T++ +++ LC A ++
Sbjct: 400 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 459
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
A L E M + G +++ Y +VD K G I+ A F M + TY++++
Sbjct: 460 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 519
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
H KAK++ A++L + L G A++DG +G +A +I ++
Sbjct: 520 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 573
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 41/231 (17%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ D Y ++ M E G P+VVTY ++I G + L+LL+ M G
Sbjct: 709 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 768
Query: 62 IPPDVWSYNSLM-HCLFQLGKPDEANRVFQDM---------------ICG---------- 95
+ P+ +Y L+ HC + G D A+ + ++M I G
Sbjct: 769 VAPNYVTYRVLIDHCC-KNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLG 827
Query: 96 --------DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV----TYNILI 143
D P + + ++++ L K + + ALR+ + F LV TYN LI
Sbjct: 828 LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT--FSATLVDYSSTYNSLI 885
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
+ LC A ++ TA + E+ G P ++ +++K FRN K L +L
Sbjct: 886 ESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 936
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 78/161 (48%), Gaps = 4/161 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ + D + +L M++ Y +I G + + S L LLDE+ +
Sbjct: 778 VLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIES--LGLLDEIGQD 835
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM--ICGDLTPCTATFNIMLNGLCKNRYTD 118
P + Y L+ L + + + A R+ +++ L ++T+N ++ LC +
Sbjct: 836 DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVE 895
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL 159
A ++F + K G +PE+ ++ LIKGL + ++ A +L
Sbjct: 896 TAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 936
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 184/368 (50%), Gaps = 8/368 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ D +L R+ E +VV +N++I G L+ + +L + M G
Sbjct: 270 LLQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKG 325
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +Y+ LMH L +LG+ A R+ ++M P T+ I+L+ CKN D+
Sbjct: 326 CQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTR 385
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G YN +I LCK GR+ A +++E+ G P+ +Y TI+
Sbjct: 386 ALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHL 445
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N + + + + +G +G Y T+I A ++ GR ++A ++M+ G LD+
Sbjct: 446 CNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDV 505
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
VSYN LI CK+G ++ + +LL+EM ++G + + ++ ILI LCK ++ A +
Sbjct: 506 VSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQ 565
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G ++ YN +++ L K G + A+N+ E + + D TY+ ++ CK +
Sbjct: 566 MLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRL 625
Query: 358 LPSASKLL 365
L A+ LL
Sbjct: 626 LDDAAMLL 633
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 198/434 (45%), Gaps = 35/434 (8%)
Query: 5 AYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP 64
A C+ D +L M G PD V Y ++I ++ + LL+EML MG
Sbjct: 168 ALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAA 227
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM- 123
DV +++ ++ + LG+ EA R+ M+ P T+ +L GLC+ R D A M
Sbjct: 228 DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML 287
Query: 124 ------------------------------FRGLQKHGFVPELVTYNILIKGLCKAGRLR 153
+ + G P+ TY+IL+ GLCK GR+
Sbjct: 288 GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIG 347
Query: 154 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
+A +L+E+ G APN +TYT ++ +N + +L M KG T + GY +I
Sbjct: 348 SAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMI 407
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
A K GR+ EA +++M + G DI SYNT+I C ++E A + + + ++G
Sbjct: 408 YALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVV 467
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
+ T+ +I L + G + A + M G ++ +YN ++ + KDG +D ++ +
Sbjct: 468 ANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVL 527
Query: 334 FESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
E M K ++ +Y+ ++ LCK +R+ A +L L G+ +++GL
Sbjct: 528 LEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCK 587
Query: 390 SGCRREAKKIQSKI 403
G A + K+
Sbjct: 588 MGWMHAALNLLEKL 601
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 146/288 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C+ + +L M + G +P+VVTY ++ +N + + LL+EM
Sbjct: 335 ILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAK 394
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + YN +++ L + G+ DEA + Q+M P ++N ++ LC N + A
Sbjct: 395 GLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEA 454
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
MF L + G V +TYN +I L + GR + A + KE+ G + + ++Y ++K
Sbjct: 455 EHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKA 514
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ L +L M KG + Y +I+ K R+++A + +QM+ G+ D
Sbjct: 515 MCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPD 574
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
IV+YNTLIN CK G + AA LL+++ + D T+ ILI CK
Sbjct: 575 IVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCK 622
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 164/360 (45%), Gaps = 50/360 (13%)
Query: 88 VFQDMICGD-LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI--- 143
+++ M+ D + P T TF + LC+ D AL + RG+ +HG VP+ V Y +I
Sbjct: 145 LYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHAL 204
Query: 144 --------------------------------KGLCKAGRLRTARWILKELGDSGHAPNA 171
+G+C GR+R A ++ + G P
Sbjct: 205 CDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGV 264
Query: 172 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 231
+TY +++ R R+ +L + + TVI + G+L EAT+ E
Sbjct: 265 MTYGFLLQGLCRVRQADEARAMLGRVPELNVVL----FNTVIGGCLAEGKLAEATELYET 320
Query: 232 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
M G Q D +Y+ L++ CK G++ +A LL EMEK+GF + T+TI++ CK G
Sbjct: 321 MGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGM 380
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSS 347
R LE M+ G N + YN ++ L KDG++D A+ + + M + D +Y++
Sbjct: 381 WDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNT 440
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
++++LC +++ A + + L+ GV ++ L G + Q +R+AK
Sbjct: 441 IIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDG------RWQDAVRLAK 494
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 158/347 (45%), Gaps = 18/347 (5%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
+ P T+ R +L LL M G PD Y +++H L G EA
Sbjct: 155 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 214
Query: 87 RVFQDMICGDLTPCTA---TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+ +M+ L C A TF+ ++ G+C A R+ + G +P ++TY L+
Sbjct: 215 TLLNEML---LMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLL 271
Query: 144 KGLCKAGRLRTARWILKELGDSGHAP--NAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
+GLC+ + AR +L G P N + + T++ C K E+ M KG
Sbjct: 272 QGLCRVRQADEARAML------GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKG 325
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
D Y ++ K+GR+ A + +M G ++V+Y +++ +CK G +
Sbjct: 326 CQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTR 385
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
LL+EM +G + + +I LCK G + A ++ M G + ++ +YN I+ L
Sbjct: 386 ALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHL 445
Query: 322 GKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKL 364
+ +++ A ++FE++ V + TY++++H L + R A +L
Sbjct: 446 CNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRL 492
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 145/265 (54%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ ++C+ +D +L M G++ + YN +I ++ + ++ L+ EM
Sbjct: 370 IVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQ 429
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ SYN++++ L + +EA +F++++ + T+N +++ L ++ +A
Sbjct: 430 GCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDA 489
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+R+ + + HG ++V+YN LIK +CK G + + +L+E+ + G PN ++Y ++
Sbjct: 490 VRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISE 549
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ R+ + LE+ M +G D Y T+I K+G + A + +E++ + V D
Sbjct: 550 LCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPD 609
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLD 265
I++YN LI+ +CK L+ A +LL+
Sbjct: 610 IITYNILISWHCKVRLLDDAAMLLN 634
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 169/351 (48%), Gaps = 4/351 (1%)
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
PP+ +SYN ++ +++ G+ +A VF +M + P T+N M++G K + R
Sbjct: 12 PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFR 71
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ + HG P +TYN+L+ GLC+AGR+ +L E+ P+ TY+ +
Sbjct: 72 LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 131
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
RN K L + + G T + ++ K G++ A + ++ +V G+ V
Sbjct: 132 RNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 191
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
YNTLIN YC+ G+LE A+ +M+ + + D T+ LI+GLCKA I A+ L M
Sbjct: 192 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 251
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 358
G + +E +N ++D G+ G+++ V M+ + +Y S+V+ CK ++
Sbjct: 252 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 311
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
P A +L V A++D G +A + K++ IS
Sbjct: 312 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGIS 362
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 175/354 (49%), Gaps = 4/354 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + M E + P+ +TYN++I G + L L D+M+ G+ P+ +YN L+ L
Sbjct: 37 VFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLC 96
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G+ E + + +M + P T++I+ +GL +N + L +F K+G
Sbjct: 97 RAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDY 156
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T +IL+ GLCK G++ A +L+ L ++G P + Y T++ + + + M
Sbjct: 157 TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM 216
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K + D Y +I K R+ A D + +M +GV + ++NTLI+ Y + G+L
Sbjct: 217 KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 276
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
E +++L EM++ G + + ++ +++ CK G I A L+ M N + YN I
Sbjct: 277 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAI 336
Query: 318 VDRLGKDGKIDHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLS 367
+D + G D A + E M+ + S TY+ ++ LC ++ A +++ S
Sbjct: 337 IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINS 390
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 202/448 (45%), Gaps = 39/448 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID + + +AG+ + ++M G+ P+ +TYN L++G R + + LLDEM
Sbjct: 56 MIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQK 115
Query: 62 IPPDVWSYNSL------------MHCLF-----------------------QLGKPDEAN 86
+ PD ++Y+ L M LF + GK A
Sbjct: 116 MVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAE 175
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
V Q ++ L P +N ++NG C+ + A F ++ P+ +TYN LI GL
Sbjct: 176 EVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 235
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CKA R+ A+ +L E+ D+G P T+ T++ R + + +LS M+ G +
Sbjct: 236 CKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNV 295
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +++ AF K G++ EA ++ M V + YN +I+ Y + G + A++L+++
Sbjct: 296 VSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEK 355
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+ G T+ +LI GLC I A + ++ + +YN ++ G
Sbjct: 356 MKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGN 415
Query: 327 IDHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
ID A+++ + M +K + TY ++ L A RL L +++ V +
Sbjct: 416 IDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNI 475
Query: 383 VVDGLRHSGCRREAKKIQSKIRMAKISH 410
+V+ G +A+ ++ ++ + +H
Sbjct: 476 MVEAYSKYGNEIKAEDLRKEMLQKRNNH 503
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 40/274 (14%)
Query: 158 ILKELG-DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 216
+L+ +G D PNA +Y ++ +R + +E+ M + + Y T+I
Sbjct: 1 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60
Query: 217 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
+K G L+ +QMV G++ + ++YN L++ C+ G++ LLDEM Q D
Sbjct: 61 IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 120
Query: 277 YTHTILID-----------------------------------GLCKAGNIKGARLHLEY 301
+T++IL D GLCK G + A L+
Sbjct: 121 FTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 180
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
+ G YN +++ + G+++ A + F M+ + D TY+++++ LCKA+R
Sbjct: 181 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 240
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ +A LL+ +GV ++D +G
Sbjct: 241 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 274
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 181/373 (48%), Gaps = 34/373 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C D + +M E G++P V TYN+LI G + +L++M E+G
Sbjct: 427 LIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIG 486
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V SY SL++CL + GK EA V +DMIC + P +N++++G C +AL
Sbjct: 487 VKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDAL 546
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM--- 178
R F + + P LVTYN+LI GLCK G+L A L ++ SGH+P+ ITY +++
Sbjct: 547 RFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGY 606
Query: 179 -------KC-----CFRN-------RKY--------KLGLEIL----SAMKRKGYTFDGF 207
KC +N R Y K G+E++ + M + D
Sbjct: 607 ANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPDRV 666
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y +I + +IG ++A + M+ G+ D ++YN+LI + +EGKL L++ M
Sbjct: 667 VYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNM 726
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
+ + T+ IL+ G C + GA + M + F N N + L ++G++
Sbjct: 727 KAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRL 786
Query: 328 DHAINVFESMEVK 340
+ M VK
Sbjct: 787 QEVQVICSEMNVK 799
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 189/393 (48%), Gaps = 4/393 (1%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
+ +G D Y I A + L ++ LD M + G+ P+V+ YN L+ L +
Sbjct: 166 EIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREK 225
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
+ +A ++F +M +L T+N +++G CK D A +M +++ P ++T+N
Sbjct: 226 RIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFN 285
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
L+ GLCK +++ AR +LKE+ +G P+ TY+ + R +E+ K
Sbjct: 286 SLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEK 345
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G + + ++ K G++++A + +++ +G+ D V YNT +N YC+ G + A
Sbjct: 346 GIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKA 405
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
L ++ ME G + T LID C + A ++ M + G ++E YN ++D
Sbjct: 406 ILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDG 465
Query: 321 LGKDGKIDHAINVFESME---VKDS-FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
GK D + E ME VK + +Y S+++ LCK ++ A +L + GV
Sbjct: 466 YGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPN 525
Query: 377 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
++DG G ++A + ++ ++IS
Sbjct: 526 AQVYNMLIDGSCMVGKVKDALRFFDEMMRSEIS 558
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 189/409 (46%), Gaps = 39/409 (9%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
I A + + G L+ MR+ G+ P+V YN LI G R + + + DEM + +
Sbjct: 183 IQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINL 242
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
+ +YN+L+ ++G+ D A ++ + M + P TFN +L+GLCK R A
Sbjct: 243 VGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARS 302
Query: 123 MFRGLQKHGFVPELVTY-----------------------------------NILIKGLC 147
+ + ++ +GF+P+ TY +IL+ GLC
Sbjct: 303 LLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLC 362
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K G++ A ILK+ ++G + + Y T + R + + M+ G +
Sbjct: 363 KQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSI 422
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
+ ++I F + + +A +++++M GV + +YNTLI+ Y K + + +L++M
Sbjct: 423 TFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQM 482
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
E+ G + + ++ LI+ LCK G I A + L M G N + YN ++D GK+
Sbjct: 483 EEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKV 542
Query: 328 DHAINVFESM---EVKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
A+ F+ M E+ + TY+ ++ LCK +L A L SG
Sbjct: 543 KDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSG 591
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 170/395 (43%), Gaps = 40/395 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ C+ + IL + E G+ D V YN+ + G R ++ ++ ++ M
Sbjct: 356 ILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESF 415
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ ++NSL+ + + D+A + M +TP T+N +++G K D
Sbjct: 416 GLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRC 475
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ +++ G P +V+Y LI LCK G++ A +L+++ G PNA Y ++
Sbjct: 476 FQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLID- 534
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
G C V G++K+A + ++M+ +
Sbjct: 535 ---------------------------GSCMV-------GKVKDALRFFDEMMRSEISPT 560
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YN LI+ CK+GKL A L ++ G D T+ LI G AGN+ E
Sbjct: 561 LVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYE 620
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
M +G + Y+ ++ K+G I+ ++ M + D Y++M+H +
Sbjct: 621 TMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIG 679
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
A L L G+ K +++ G G
Sbjct: 680 NTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREG 714
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 143/273 (52%), Gaps = 4/273 (1%)
Query: 105 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 164
+++L+ CK++ A+ ++ +++ G +P LV+ ++L L + + E+ +
Sbjct: 110 DMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIEN 169
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
SG + Y ++ + + K+G+E L +M+++G + F Y +I + R+++
Sbjct: 170 SGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRD 229
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A ++M + IV+YNTLI+ YCK G+L+AA+ + + M+++ + T L+
Sbjct: 230 AEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLS 289
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 340
GLCK +K AR L+ M GF + Y+ + D L + + A+ ++E K
Sbjct: 290 GLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRI 349
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+++T S +++ LCK ++ A ++L ++G+
Sbjct: 350 NNYTGSILLNGLCKQGKVEKAEEILKKFTENGL 382
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 121/303 (39%), Gaps = 39/303 (12%)
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+F ++ GF + Y I+ K L+ L + G PN Y ++
Sbjct: 163 LFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLC 222
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
R ++ + ++ M Y T+I + K+G L A E+M V +I+
Sbjct: 223 REKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNII 282
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID------------------ 284
++N+L++ CK K++ A LL EME GF D YT++IL D
Sbjct: 283 TFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQA 342
Query: 285 -----------------GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
GLCK G ++ A L+ + G ++ YN V+ + G +
Sbjct: 343 TEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDM 402
Query: 328 DHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
+ AI E ME +S T++S++ C K + A + + + GV +
Sbjct: 403 NKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTL 462
Query: 384 VDG 386
+DG
Sbjct: 463 IDG 465
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 3/165 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ N M + + PD V YN++I + L ML+ GI PD +YNSL+ F
Sbjct: 652 LYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHF 711
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ GK + +M +L P T++I++ G C + A +R + ++ F+P
Sbjct: 712 REGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNAS 771
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSG---HAPNAITYTTIMK 179
N L GL + GRL+ + I E+ G H P+ + + K
Sbjct: 772 ICNELTAGLEQEGRLQEVQVICSEMNVKGIINHWPSKEEISAVAK 816
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 184/368 (50%), Gaps = 8/368 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ D +L R+ E +VV +N++I G L+ + +L + M G
Sbjct: 286 LLQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKG 341
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +Y+ LMH L +LG+ A R+ ++M P T+ I+L+ CKN D+
Sbjct: 342 CQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTR 401
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G YN +I LCK GR+ A +++E+ G P+ +Y TI+
Sbjct: 402 ALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHL 461
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N + + + + +G +G Y T+I A ++ GR ++A ++M+ G LD+
Sbjct: 462 CNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDV 521
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
VSYN LI CK+G ++ + +LL+EM ++G + + ++ ILI LCK ++ A +
Sbjct: 522 VSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQ 581
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G ++ YN +++ L K G + A+N+ E + + D TY+ ++ CK +
Sbjct: 582 MLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRL 641
Query: 358 LPSASKLL 365
L A+ LL
Sbjct: 642 LDDAAMLL 649
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 198/434 (45%), Gaps = 35/434 (8%)
Query: 5 AYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP 64
A C+ D +L M G PD V Y ++I ++ + LL+EML MG
Sbjct: 184 ALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAA 243
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM- 123
DV +++ ++ + LG+ EA R+ M+ P T+ +L GLC+ R D A M
Sbjct: 244 DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML 303
Query: 124 ------------------------------FRGLQKHGFVPELVTYNILIKGLCKAGRLR 153
+ + G P+ TY+IL+ GLCK GR+
Sbjct: 304 GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIG 363
Query: 154 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
+A +L+E+ G APN +TYT ++ +N + +L M KG T + GY +I
Sbjct: 364 SAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMI 423
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
A K GR+ EA +++M + G DI SYNT+I C ++E A + + + ++G
Sbjct: 424 YALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVV 483
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
+ T+ +I L + G + A + M G ++ +YN ++ + KDG +D ++ +
Sbjct: 484 ANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVL 543
Query: 334 FESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
E M K ++ +Y+ ++ LCK +R+ A +L L G+ +++GL
Sbjct: 544 LEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCK 603
Query: 390 SGCRREAKKIQSKI 403
G A + K+
Sbjct: 604 MGWMHAALNLLEKL 617
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 183/399 (45%), Gaps = 51/399 (12%)
Query: 50 SLDLLDEMLE-MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD-LTPCTATFNIM 107
+L LLD++ G+ P SYN ++ L + +A +++ M+ D + P T TF +
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181
Query: 108 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI------------------------ 143
LC+ D AL + RG+ +HG VP+ V Y +I
Sbjct: 182 ARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241
Query: 144 -----------KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+G+C GR+R A ++ + G P +TY +++ R R+
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA 301
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+L + + TVI + G+L EAT+ E M G Q D +Y+ L++ C
Sbjct: 302 MLGRVPELNVVL----FNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLC 357
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K G++ +A LL EMEK+GF + T+TI++ CK G R LE M+ G N +
Sbjct: 358 KLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQ 417
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 368
YN ++ L KDG++D A+ + + M + D +Y++++++LC +++ A + +
Sbjct: 418 GYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL 477
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
L+ GV ++ L G + Q +R+AK
Sbjct: 478 LEEGVVANGITYNTIIHALLRDG------RWQDAVRLAK 510
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 146/288 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C+ + +L M + G +P+VVTY ++ +N + + LL+EM
Sbjct: 351 ILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAK 410
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + YN +++ L + G+ DEA + Q+M P ++N ++ LC N + A
Sbjct: 411 GLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEA 470
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
MF L + G V +TYN +I L + GR + A + KE+ G + + ++Y ++K
Sbjct: 471 EHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKA 530
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ L +L M KG + Y +I+ K R+++A + +QM+ G+ D
Sbjct: 531 MCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPD 590
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
IV+YNTLIN CK G + AA LL+++ + D T+ ILI CK
Sbjct: 591 IVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCK 638
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 158/347 (45%), Gaps = 18/347 (5%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
+ P T+ R +L LL M G PD Y +++H L G EA
Sbjct: 171 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 230
Query: 87 RVFQDMICGDLTPCTA---TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+ +M+ L C A TF+ ++ G+C A R+ + G +P ++TY L+
Sbjct: 231 TLLNEML---LMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLL 287
Query: 144 KGLCKAGRLRTARWILKELGDSGHAP--NAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
+GLC+ + AR +L G P N + + T++ C K E+ M KG
Sbjct: 288 QGLCRVRQADEARAML------GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKG 341
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
D Y ++ K+GR+ A + +M G ++V+Y +++ +CK G +
Sbjct: 342 CQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTR 401
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
LL+EM +G + + +I LCK G + A ++ M G + ++ +YN I+ L
Sbjct: 402 ALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHL 461
Query: 322 GKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKL 364
+ +++ A ++FE++ V + TY++++H L + R A +L
Sbjct: 462 CNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRL 508
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 145/265 (54%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ ++C+ +D +L M G++ + YN +I ++ + ++ L+ EM
Sbjct: 386 IVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQ 445
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ SYN++++ L + +EA +F++++ + T+N +++ L ++ +A
Sbjct: 446 GCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDA 505
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+R+ + + HG ++V+YN LIK +CK G + + +L+E+ + G PN ++Y ++
Sbjct: 506 VRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISE 565
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ R+ + LE+ M +G D Y T+I K+G + A + +E++ + V D
Sbjct: 566 LCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPD 625
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLD 265
I++YN LI+ +CK L+ A +LL+
Sbjct: 626 IITYNILISWHCKVRLLDDAAMLLN 650
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 195/402 (48%), Gaps = 4/402 (0%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
C+ D +++ ++ G+ PD YN++I +N + + LL M + G+ PD
Sbjct: 288 CRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDN 347
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
Y +++ +LG A ++F +M + P T+ +++G+CK+ A MF
Sbjct: 348 VVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNE 407
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
+ G P+ VTY LI G CKAG ++ A + ++ G PN +TYT + +N +
Sbjct: 408 MLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGE 467
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
+ E+L M RKG + + Y T++ KIG +++ ME+M G D ++Y T
Sbjct: 468 IDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTT 527
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
L++ YCK G++ A+ LL M + + T +L++G C +G ++ +E+M + G
Sbjct: 528 LMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKG 587
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSAS 362
N +N ++ + + ++++M + DS TY+ ++ CKA+ + A
Sbjct: 588 IMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAW 647
Query: 363 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
L ++ G + + A++ G EA+K+ ++R
Sbjct: 648 FLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMR 689
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 184/366 (50%), Gaps = 11/366 (3%)
Query: 45 SLLSCSLD-------LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 97
S LSC+ + + +E E+G+ + S N ++HCL QLGK EA+ + M
Sbjct: 214 SRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGN 273
Query: 98 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 157
P ++ ++++G C+ D L++ L+ G P+ YN +I LCK G + A
Sbjct: 274 FPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQ 333
Query: 158 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 217
+L+ + G P+ + YTT++ + ++ M+RK D Y +VI
Sbjct: 334 LLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGIC 393
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 277
K G++ EA + +M+ G++ D V+Y LI+ YCK G+++ A+ + ++M ++G +
Sbjct: 394 KSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVV 453
Query: 278 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
T+T L DGLCK G I A L M++ G N+ YN IV+ L K G I+ + + E M
Sbjct: 454 TYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEM 513
Query: 338 EV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 393
++ D+ TY++++ CK + A +LL L ++ +++G SG
Sbjct: 514 DLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGML 573
Query: 394 REAKKI 399
+ +++
Sbjct: 574 EDGERL 579
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 149/291 (51%), Gaps = 2/291 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ +++ N+M + G++P+VVTY +L G +N + + +LL EM G
Sbjct: 423 LIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKG 482
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V++YN++++ L ++G ++ ++ ++M P T T+ +++ CK A
Sbjct: 483 LQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAH 542
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-C 180
+ R + P LVT+N+L+ G C +G L +++ + + G PNA T+ ++MK
Sbjct: 543 ELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQY 602
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C +N + EI AM +G D Y +I K +KEA ++MV G +
Sbjct: 603 CIKN-NMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVT 661
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
+Y+ LI + K K A L +EM K G +K + I +D + GN
Sbjct: 662 AATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGN 712
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 147/308 (47%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ N M G+ PD VTY +LI G + + + + ++M++ G+ P+V +Y +L L
Sbjct: 404 MFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLC 463
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G+ D AN + +M L P T+N ++NGLCK + +++ + GF P+ +
Sbjct: 464 KNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTI 523
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY L+ CK G + A +L+ + + P +T+ +M + + G ++ M
Sbjct: 524 TYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWM 583
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
KG + + +++ + ++ T+ + M GV D +YN LI +CK +
Sbjct: 584 LEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNM 643
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A+ L EM ++G+ T+ LI G K AR E M K G + + Y+
Sbjct: 644 KEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIF 703
Query: 318 VDRLGKDG 325
VD ++G
Sbjct: 704 VDVNYEEG 711
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 174/370 (47%), Gaps = 12/370 (3%)
Query: 47 LSCSLDLLDEML-----EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 101
+S S L EML + G P V ++ L + G EA ++F ++ +
Sbjct: 149 VSKSFHLFTEMLIYTYKDWGSHPLV--FDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSV 206
Query: 102 ATFNIMLNGL-CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
+ N+ L+ L C A+++F + G V+ NI++ LC+ G++R A +L
Sbjct: 207 DSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLV 266
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
++ D G+ P+ ++Y ++ R + L+++ +K KG D + Y +I K G
Sbjct: 267 QMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNG 326
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
+ EA + M GV D V Y T+I+ +CK G + AA L DEM ++ D T+T
Sbjct: 327 EVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYT 386
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
+I G+CK+G + AR M G + + Y ++D K G++ A +V M K
Sbjct: 387 SVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQK 446
Query: 341 ----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ TY+++ LCK + A++LL + G++ +V+GL G +
Sbjct: 447 GLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQT 506
Query: 397 KKIQSKIRMA 406
K+ ++ +A
Sbjct: 507 VKLMEEMDLA 516
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 74/145 (51%), Gaps = 4/145 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ +C + G ++ M E GI P+ T+NSL+ + + + ++ M +
Sbjct: 562 VLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDR 621
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G+ PD +YN L+ HC + K EA + ++M+ + AT++ ++ G K +
Sbjct: 622 GVMPDSNTYNILIKGHCKARNMK--EAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFV 679
Query: 119 NALRMFRGLQKHGFVPELVTYNILI 143
A ++F ++KHG V E Y+I +
Sbjct: 680 EARKLFEEMRKHGLVAEKDIYDIFV 704
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 96/217 (44%), Gaps = 10/217 (4%)
Query: 202 YTFDGFGYCTVI-----AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN-LYCKEG 255
YT+ +G ++ V+ G + EA +++ GV + + S N ++ L C
Sbjct: 162 YTYKDWGSHPLVFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFE 221
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
++ A + +E + G + + I++ LC+ G ++ A L M G ++ +Y
Sbjct: 222 GIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYG 281
Query: 316 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
+V + G++D + + + ++ K D + Y++++ LCK + A +LL K
Sbjct: 282 VVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKW 341
Query: 372 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
GV V+ G G A K+ ++R KI
Sbjct: 342 GVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKI 378
>gi|297736961|emb|CBI26162.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 179/363 (49%), Gaps = 6/363 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A+C G+ +L R+ E G+ P +N LI+G ++ DLL M+
Sbjct: 268 LVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARN 327
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+++Y +++ L + GK E RVF+D+ P + M++GLC+ ++ +A
Sbjct: 328 RAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDAR 387
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + + GF+P TYN +I G K G L A + +E+ D G+ ++Y ++K
Sbjct: 388 KLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGL 447
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K K ++ M KG + Y ++ F K G++ E + + +++ G+Q
Sbjct: 448 CSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSA 507
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
SY LI+ C+EG ++ A +L D+M+ +G E TH +I G CK G L
Sbjct: 508 ASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTT 567
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYS-----SMVHNLCKAK 356
M + +++ ++ L + ++D A+ V +SM +K F S S+V LC+
Sbjct: 568 MLRSKLRPQKKSFESLIQCLSQIDRLDDALLVLDSM-LKIGFRLSISICNSLVTKLCEKN 626
Query: 357 RLP 359
LP
Sbjct: 627 SLP 629
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/418 (22%), Positives = 178/418 (42%), Gaps = 12/418 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L DA + + +A + L+ +P + + I + L+ ++ + ++ +
Sbjct: 165 VLFDALVEAGACNAAKSFLD---STNFNPKPASLEAYIRCLCKGGLVEEAISVFGQLKGI 221
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + ++NS++ + G+ D ++ +M+ + T ++ C +
Sbjct: 222 GVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVADVHTVGYLVQAFCDENRISDG 281
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ R + + G VP +N LI G CK +L + AP+ TY ++
Sbjct: 282 HNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARNRAPDIFTYQEVVNG 341
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K G + +K +GY D Y T+I ++ L +A +M+ G +
Sbjct: 342 LCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKGFLPN 401
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+YN +I+ Y K G LE A+ + EM +G+ ++ ++I GLC G IK A E
Sbjct: 402 EYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFE 461
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN-VFESME---VKDSFTYSSMVHNLCKAK 356
M+ G N YN +V K+GKI N ++E ++ + +Y+ ++ LC+
Sbjct: 462 EMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLCQEG 521
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK-----IQSKIRMAKIS 409
+ +A L G+ ++ G GC E + ++SK+R K S
Sbjct: 522 DMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLRSKLRPQKKS 579
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 115/292 (39%), Gaps = 22/292 (7%)
Query: 120 ALRMFRGLQ-KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
+LR F L + GF P+ + N+L L +AG A+ L + P + +
Sbjct: 143 SLRFFHWLSSQSGFSPDSSSCNVLFDALVEAGACNAAKSFLDS---TNFNPKPASLEAYI 199
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF-------VKIGRLKEATDYMEQ 231
+C + + + + +K G G C IA + V+ GR+ + +
Sbjct: 200 RCLCKGGLVEEAISVFGQLK-------GIGVCASIATWNSVLRGSVRAGRIDFVWELYGE 252
Query: 232 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
MV V D+ + L+ +C E ++ + LL + + G LI G CK
Sbjct: 253 MVESSVVADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKA 312
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSS 347
L M ++ Y +V+ L K GK VF+ ++ D Y++
Sbjct: 313 YGRVSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTT 372
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
M+H LC+ K L A KL ++ G + A++ G G EA K+
Sbjct: 373 MIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKM 424
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 1/185 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I C + + M GI + +TYN+L+ G + + +LL E+L+
Sbjct: 442 VMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQ 501
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P SY L+ L Q G A ++ DM + P T + M+ G CK
Sbjct: 502 GIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEG 561
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN-AITYTTIMK 179
+ + + P+ ++ LI+ L + RL A +L + G + +I + + K
Sbjct: 562 MEWLTTMLRSKLRPQKKSFESLIQCLSQIDRLDDALLVLDSMLKIGFRLSISICNSLVTK 621
Query: 180 CCFRN 184
C +N
Sbjct: 622 LCEKN 626
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 197/406 (48%), Gaps = 8/406 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID + D Y + M + +SPD VTYNS+IA ++ + ++D E+L +
Sbjct: 17 IIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSK----AQAMDRAMEVLTVM 72
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ ++YNS+MH G+ ++A +F+ M + P T+N +++ LCKN A
Sbjct: 73 VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEAR 132
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + K G P++ TY L+ G G L +L + +G + + ++
Sbjct: 133 KIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAY 192
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + + S M+++G T + Y TVI K+GRL +A EQM+ G+ ++
Sbjct: 193 TKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNV 252
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V Y +LI+ C K E A L+ E+ QG + ++D LCK G + ++ +
Sbjct: 253 VVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDL 312
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
+ IG + ++ Y+ ++D GK+D A+ + M DS TYS++++ CK R
Sbjct: 313 LGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINR 372
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ A L +GV ++ GL + AK++ ++I
Sbjct: 373 MEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARI 418
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 167/363 (46%), Gaps = 43/363 (11%)
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
PPDV SYN+++ LF+ G D+A + +M+ ++P T+N ++ L K + D A+
Sbjct: 8 PPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAME 67
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ + +P TYN ++ G C +G+ A I +++ G P+ +TY ++M
Sbjct: 68 VLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLC 123
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+N K +I +M ++G D Y T++ + G L E D + MV +G+QLD
Sbjct: 124 KNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHH 183
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
+N LI Y K+ K++ L+ +M +QG + + +IDGLCK G + A L+ E M
Sbjct: 184 VFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQM 243
Query: 303 NKIGFDSNLEAY-----------------------------------NCIVDRLGKDGKI 327
G N+ Y N I+D L K+G++
Sbjct: 244 IDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRV 303
Query: 328 DHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
+ +F+ + D TYS+++ C A ++ A KLL + G++ +
Sbjct: 304 IESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTL 363
Query: 384 VDG 386
++G
Sbjct: 364 ING 366
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 158/357 (44%), Gaps = 35/357 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ YC + I +M GI PDVVTYNSL+ +N + + + D M++ G
Sbjct: 83 IMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRG 142
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ +Y +L+H G E + + M+ + FNI++ K D +
Sbjct: 143 LKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVV 202
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++ G P V Y +I GLCK GRL A +++ D G PN + YT+++
Sbjct: 203 LVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHAL 262
Query: 182 FRNRKYKLGLE-------------------ILSAMKRKGYT------FDGFG-------- 208
K++ E IL ++ ++G FD G
Sbjct: 263 CTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDV 322
Query: 209 --YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T+I + G++ A + MV+ G++ D V+Y+TLIN YCK ++E A L E
Sbjct: 323 ITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKE 382
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
ME G D T+ I++ GL + A+ + + G L YN I+ K
Sbjct: 383 MESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAK 439
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 129/257 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI AY + D + ++MR+ G++P+ V Y ++I G + L ++ ++M++
Sbjct: 187 ILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDK 246
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V Y SL+H L K ++A + +++ + P FN +L+ LCK +
Sbjct: 247 GLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIES 306
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F L G P+++TY+ LI G C AG++ A +L + G P+++TY+T++
Sbjct: 307 KKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLING 366
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + L + M+ G D Y ++ + R A + ++ G QL+
Sbjct: 367 YCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLE 426
Query: 241 IVSYNTLINLYCKEGKL 257
+ +YN ++ + K L
Sbjct: 427 LSTYNIILMDFAKTNSL 443
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 135/309 (43%), Gaps = 8/309 (2%)
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
G P ++N +++GL K D A + + P+ VTYN +I L KA +
Sbjct: 5 GRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDR 64
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
A +L + PN TY +IM + + + + I M G D Y +++
Sbjct: 65 AMEVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMD 120
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
K G+ EA + MV G++ DI +Y TL++ Y +G L + LL M + G +
Sbjct: 121 YLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQL 180
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
D + ILI K + L M + G N Y ++D L K G++D A+ F
Sbjct: 181 DHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNF 240
Query: 335 ESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
E M K + Y+S++H LC + A +L+ L G+ ++D L
Sbjct: 241 EQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKE 300
Query: 391 GCRREAKKI 399
G E+KK+
Sbjct: 301 GRVIESKKL 309
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 182/378 (48%), Gaps = 6/378 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ + C+ D + + M G+ PD++TY++LI G + + ++ L ++M
Sbjct: 426 VLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSN 485
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P+ + +++ L + GK +A F +I +L+ +NIM++G K T A
Sbjct: 486 RIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREA 545
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++++ L + G P +VT+N L+ G C +L AR +L + G PNA+TYTT+M
Sbjct: 546 VKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNV 605
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ LE+LS MK K Y VI K +L+E+ +E M G+ D
Sbjct: 606 YCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPD 665
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
VSYNT+I +CK + A+ L D+M E T+ ILI+G C G++K A L
Sbjct: 666 QVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLV 725
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKA 355
+ + N AY I+ G +D A+ F M V+ F YS+++ LCK
Sbjct: 726 SLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQM-VEKGFEVSIRDYSAVIGRLCKR 784
Query: 356 KRLPSASKLLLSCLKSGV 373
+ A L GV
Sbjct: 785 CLVTEAKYFFCMMLSDGV 802
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 196/425 (46%), Gaps = 43/425 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C S + N M G+ PD+VTYN L G L++ + +++ +ML
Sbjct: 321 ILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIK 380
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G P++ +Y L+ HC Q+G +EA +++++MI + ++L LCK+R D
Sbjct: 381 GPNPNLVTYTVLICGHC--QIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVD 438
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A ++F ++ +G P+L+TY+ LI GLCK G ++ A + +++ + PN++ + I+
Sbjct: 439 VAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAIL 498
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
K + + D Y +I ++K G +EA +Q+ G+
Sbjct: 499 MGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGIS 558
Query: 239 LDIVSYN-----------------------------------TLINLYCKEGKLEAAYLL 263
IV++N TL+N+YC+EG +++ L
Sbjct: 559 PTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLEL 618
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
L EM+ + T+T++I GLCK ++ + LE M+ +G + +YN I+ K
Sbjct: 619 LSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCK 678
Query: 324 DGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
+ A +++ M + + S TY+ +++ C L A LL+S V + K A
Sbjct: 679 ARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYA 738
Query: 380 QKAVV 384
++
Sbjct: 739 YTTII 743
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 185/409 (45%), Gaps = 52/409 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
ML AY + +L +M++ + TYNSL+ ++++ D+ +E+
Sbjct: 184 MLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIM---WDVYNEIKVS 240
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P ++ + ++ L + + +A FQD + P +FN +++ CK + D A
Sbjct: 241 GTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVA 300
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
F + KHG +P+ +YNILI GLC AG + A + ++ + G P+ +TY + K
Sbjct: 301 KSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAK- 359
Query: 181 CFRNRKYKLGL-----EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
FR LGL I+ M KG + Y +I +IG ++EA ++M++
Sbjct: 360 GFR----LLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISH 415
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK-- 293
G QL I+S L+ CK +++ A+ L EME G D T++ LI GLCK G ++
Sbjct: 416 GFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQA 475
Query: 294 ---------------------------------GARLHLEYMNKIGFDSNLEAYNCIVDR 320
AR++ +Y+ ++ YN ++D
Sbjct: 476 ILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDG 535
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
K G A+ +++ + K T++S+++ C ++L A +LL
Sbjct: 536 YIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLL 584
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 167/404 (41%), Gaps = 39/404 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D C+ F P VV++N++++ + + + ML+
Sbjct: 251 IVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKH 310
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD +SYN L+H L G EA + DM L P T+NI+ G + A
Sbjct: 311 GLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGA 370
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + G P LVTY +LI G C+ G + A + KE+ G + I+ T ++
Sbjct: 371 WNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGS 430
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI--------------------- 219
++R+ + ++ M+ G D Y T+I K
Sbjct: 431 LCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPN 490
Query: 220 --------------GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
G++ +A Y + ++T + LDI+ YN +I+ Y K G A L
Sbjct: 491 SLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYK 550
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
++ ++G T L+ G C + AR L+ + G + N Y +++ ++G
Sbjct: 551 QLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEG 610
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
+ + + M+ K TY+ ++ LCK +L + +LL
Sbjct: 611 NMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLL 654
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 105/239 (43%), Gaps = 35/239 (14%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ YC+ + + +L+ M+ I P +TY +I G + L S LL++M +G
Sbjct: 602 LMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVG 661
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC--------- 112
+ PD SYN+++ + +A +++ M+ +L P + T+NI++NG C
Sbjct: 662 LTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDAD 721
Query: 113 ------KNR--------YT------------DNALRMFRGLQKHGFVPELVTYNILIKGL 146
+NR YT D A+ FR + + GF + Y+ +I L
Sbjct: 722 NLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRL 781
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
CK + A++ + G P+ + ++ + E+L+ M + G+ ++
Sbjct: 782 CKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSGWLYE 840
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 130/291 (44%), Gaps = 11/291 (3%)
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW-ILKELGDSGHAPNAITYTTI 177
+AL + ++ F+ + TYN L+ L R W + E+ SG + T + +
Sbjct: 197 DALFVLVKMKDLNFIVSIQTYNSLLYNL----RHSNIMWDVYNEIKVSGTPQSEYTSSIV 252
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ R +++ + + K + + T+++ + K+G + A + M+ G+
Sbjct: 253 VDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGL 312
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
D SYN LI+ C G + A L ++ME G E D T+ IL G G I GA
Sbjct: 313 LPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWN 372
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYS-----SMVHNL 352
++ M G + NL Y ++ + G ++ A+ +++ M + F S ++ +L
Sbjct: 373 IIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEM-ISHGFQLSIISSTVLLGSL 431
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
CK++++ A KL +G+R ++ GL G ++A + K+
Sbjct: 432 CKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKM 482
>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 194/398 (48%), Gaps = 12/398 (3%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHC 75
+ MR+A + PDVVTY L+ G ++ + +L +LD M G + PD+ N+++
Sbjct: 153 LFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDG 212
Query: 76 LFQLGKPDEANRVFQDMICGDL---TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
L ++G+ +A +F D + P T+N + + C+ A ++ ++K G
Sbjct: 213 LCKIGRLQQAI-IFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGV 271
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP--NAITYTTIMKCCFRNRKYKLG 190
P ++T N +I GLC+ GR+ A +E NA+TY+T+ +
Sbjct: 272 APNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMA 331
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+E+ M G+ D Y T+I+ + GRL +A M G +LD +YN LI
Sbjct: 332 MELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGG 391
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+C++ KL AY LL+EM+ G + D YT+ L+ GLCKAG+ L +M G +
Sbjct: 392 FCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPS 451
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLL 366
+ + +V K GK D A+ +F SM+ ++ Y++++ LCK++ + A KL
Sbjct: 452 VVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFD 511
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ V + A++ GL+ +A ++ ++R
Sbjct: 512 EMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMR 549
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 170/367 (46%), Gaps = 11/367 (2%)
Query: 53 LLDEMLEMGIP-PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 111
L + L G P PD+ +NSL+ L + G +F M + P T+ I+LNGL
Sbjct: 117 FLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGL 176
Query: 112 CKNRYTDNALRMFRGLQKHG--FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH-- 167
CK+ + +AL++ + G P++ N ++ GLCK GRL+ A + E H
Sbjct: 177 CKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGC 236
Query: 168 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
APNA+TY + R + +I++ M+++G + T+I ++GR+ A +
Sbjct: 237 APNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALE 296
Query: 228 YMEQ--MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ + V + + V+Y+TL + + ++ A L EM G D + +I G
Sbjct: 297 FFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISG 356
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKD 341
L +AG + A M K GF + +AYN ++ + K+ A + E M+ D
Sbjct: 357 LTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPD 416
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
+TY++++ LCKA + +LL + G + +V G +G EA +I
Sbjct: 417 VYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFR 476
Query: 402 KIRMAKI 408
+ A+I
Sbjct: 477 SMDEARI 483
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 132/289 (45%), Gaps = 6/289 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L DA+C+ I+ RM + G++P+V+T N++I G R + +L+ E +
Sbjct: 246 LADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFRE--KRT 303
Query: 62 IPPD----VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
+ P+ +Y++L D A +F +M P + M++GL +
Sbjct: 304 VWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRL 363
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
+A ++K GF + YNILI G C+ +L A +L+E+ G P+ TY T+
Sbjct: 364 LDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTL 423
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + + E+L M G + T++ + K G+ EA M +
Sbjct: 424 LSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARI 483
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
Q + V YNTLI+ CK +++ A L DEM ++ + T+ L+ GL
Sbjct: 484 QPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGL 532
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 95/179 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C+ Y +L M+ G+ PDV TYN+L++G + S +LL M++
Sbjct: 387 ILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDD 446
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P V ++ +L+H + GK DEA R+F+ M + P T +N +++ LCK+R D A
Sbjct: 447 GCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVA 506
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+++F +++ + TYN L+KGL A ++ + + PN +T +M+
Sbjct: 507 IKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLME 565
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
T M++AG D YN LI G R L + +LL+EM +G+ PDV++YN+L+ L
Sbjct: 368 TTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGL 427
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ G + + MI P TF +++G CK TD ALR+FR + + P
Sbjct: 428 CKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNT 487
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
V YN LI LCK+ + A + E+ + N TY ++K + + E++
Sbjct: 488 VIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDR 547
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 231
M+ + T + ++ +IG + +M+Q
Sbjct: 548 MREERCTPNYVTVDVLMEWLPEIGETERLKCFMQQ 582
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 115/257 (44%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L A+ + D + + M + G PD V Y ++I+G T+ L + M + G
Sbjct: 318 LASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAG 377
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
D +YN L+ + K EA + ++M L P T+N +L+GLCK
Sbjct: 378 FKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVD 437
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P +VT+ L+ G CKAG+ A I + + ++ PN + Y T++
Sbjct: 438 ELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFL 497
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++R+ + +++ M+ K + Y ++ ++A + M++M + +
Sbjct: 498 CKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNY 557
Query: 242 VSYNTLINLYCKEGKLE 258
V+ + L+ + G+ E
Sbjct: 558 VTVDVLMEWLPEIGETE 574
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 75/160 (46%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ F A +L M + G P VVT+ +L+ G + +L + M E
Sbjct: 423 LLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEAR 482
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+ YN+L+ L + + D A ++F +M ++ T+N +L GL + + A
Sbjct: 483 IQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAF 542
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
+ +++ P VT ++L++ L + G + +++
Sbjct: 543 ELMDRMREERCTPNYVTVDVLMEWLPEIGETERLKCFMQQ 582
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 208/410 (50%), Gaps = 6/410 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ + +I M + +P+ VT++SLI G + + + L ++ML+
Sbjct: 199 IMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDC 258
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P Y SL+ F+ G+ ++ ++++++M+ +P N ++ + K T+
Sbjct: 259 GHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKG 318
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+FR + HGF+P+ +Y+ILI GL KAG + + + G + Y ++
Sbjct: 319 RALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDG 378
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K ++L MK KG+ Y +VI KI RL EA E+ ++G++L+
Sbjct: 379 FCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLN 438
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V Y++LI+ + K G+++ AYL+++E+ ++G + YT L+D L KA I A + +
Sbjct: 439 VVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQ 498
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + N Y+ +++ L + K + A ++ M+ ++ TY++M+ L KA
Sbjct: 499 SMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAG 558
Query: 357 RLPSASKLLLSCLKSGVRILKSAQ-KAVVDGLRHSGCRREAKKIQSKIRM 405
+ AS L S K+ I SA A+++GL + +A + + R+
Sbjct: 559 NILEASG-LFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRL 607
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/477 (26%), Positives = 203/477 (42%), Gaps = 75/477 (15%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I Y FD Y +L R + G P V+ YN ++ + + +L + +EM
Sbjct: 96 MIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDA 155
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+P +V +YN L+ L + GK + A + DM L P T NIM++ LCK + + A
Sbjct: 156 VP-NVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEAC 214
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT------ 175
+F G+ P VT++ LI GL K GR+ A + +++ D GH P AI YT
Sbjct: 215 SIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSF 274
Query: 176 -----------------------------TIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
T M C F+ + + G + + G+ D
Sbjct: 275 FKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDA 334
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I VK G E + M G LD +YN +I+ +CK GK+ AY LL+E
Sbjct: 335 RSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEE 394
Query: 267 MEKQG---------------------------FECDK--------YTHTILIDGLCKAGN 291
M+ +G FE K ++ LIDG K G
Sbjct: 395 MKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGR 454
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSS 347
I A L +E + + G N+ +NC++D L K +I+ A+ F+SM+ + TYS
Sbjct: 455 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSI 514
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+++ LC+ ++ A K G++ ++ GL +G EA + S+ +
Sbjct: 515 LINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFK 571
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 190/405 (46%), Gaps = 13/405 (3%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
C+ D + ++ + P YN++I G + LL+ G P V
Sbjct: 66 CKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSV 125
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
+YN ++ CL + + +EA R+F++M D P T+NI+++ LC+ + AL +
Sbjct: 126 IAYNCILTCLGKKRRVEEALRIFEEMK-RDAVPNVPTYNILIDMLCREGKLNAALEIRDD 184
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM----KCCF 182
+++ G P ++T NI+I LCKA +L A I + + D PNA+T+++++ KC
Sbjct: 185 MERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGR 244
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ Y L ++L G+ Y ++I +F K GR ++ ++MV G D+
Sbjct: 245 VDDAYSLYEKMLDC----GHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLT 300
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
NT ++ K G+ E L E+ GF D +++ILI GL KAG M
Sbjct: 301 LINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAM 360
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRL 358
+ G + AYN ++D K GK++ A + E M+VK TY S++ L K RL
Sbjct: 361 KEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRL 420
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A L +G+++ +++DG G EA I ++
Sbjct: 421 DEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEEL 465
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 125/274 (45%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
Y + M+E G D YN++I G ++ ++ + LL+EM G PP V +Y S++
Sbjct: 354 YELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDG 413
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
L ++ + DEA +F++ + ++ +++G K D A + L + G P
Sbjct: 414 LAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPN 473
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
+ T+N L+ L KA + A + + D PN ITY+ ++ R RK+
Sbjct: 474 VYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQ 533
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M++ G + Y T+I+ K G + EA+ + +G D SYN +I
Sbjct: 534 EMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSAN 593
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
K AY L +E +G T +L+D L KA
Sbjct: 594 KAMDAYALFEETRLKGCNIHTKTCVVLLDALHKA 627
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 153/387 (39%), Gaps = 72/387 (18%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID + D Y++ +M + G P + Y SLI + + EM+ G
Sbjct: 235 LIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTG 294
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ N+ M C+F+ G+ ++ +F+++ P +++I+++GL K +
Sbjct: 295 CSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETY 354
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++ G V + YN +I G CK+G++ A +L+E+ GH P +TY +++
Sbjct: 355 ELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGL 414
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + K G + Y ++I F K+GR+ EA ME+++ G+ ++
Sbjct: 415 AKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNV 474
Query: 242 -----------------------------------VSYNTLINLYCKEGKLEAAYLLLDE 266
++Y+ LIN C+ K A++ E
Sbjct: 475 YTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQE 534
Query: 267 MEKQGFECDKYTHTILI-----------------------------------DGLCKAGN 291
M+K G + + T+T +I +GL A
Sbjct: 535 MQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANK 594
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIV 318
A E G N+ C+V
Sbjct: 595 AMDAYALFEETRLKG--CNIHTKTCVV 619
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 130/303 (42%), Gaps = 50/303 (16%)
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNG----------LCKNRYTDNALRMFRGLQKHGFV 133
EA + Q M P + + I++ LCK D A+ +F L+++ V
Sbjct: 28 EAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQLEQNRKV 87
Query: 134 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 193
P YN +I G AG+ A +L+ G P+ I Y I+ C + R+ + L I
Sbjct: 88 PCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRI 147
Query: 194 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 253
MKR D V ++ +YN LI++ C+
Sbjct: 148 FEEMKR-----------------------------------DAVP-NVPTYNILIDMLCR 171
Query: 254 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
EGKL AA + D+ME+ G + T I+ID LCKA ++ A E M+ N
Sbjct: 172 EGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVT 231
Query: 314 YNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 369
++ ++D LGK G++D A +++E M V + Y+S++ + K R K+ +
Sbjct: 232 FSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMV 291
Query: 370 KSG 372
+G
Sbjct: 292 HTG 294
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 203 TFDGFGYCT-----VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN-------- 249
+ GFG + ++A VK +L+EA D ++ M + +Y LI
Sbjct: 2 SLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLF 61
Query: 250 --LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
+ CK +L+ A L +++E+ Y + +I G AG A LE G
Sbjct: 62 PWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGS 121
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYSSMVHNLCKAKRLPSA 361
++ AYNCI+ LGK +++ A+ +FE M+ V + TY+ ++ LC+ +L +A
Sbjct: 122 IPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAA 178
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 3/170 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+DA + + M++ P+ +TY+ LI G R + + EM ++G
Sbjct: 480 LLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLG 539
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +Y +++ L + G EA+ +F P +A++N M+ GL +A
Sbjct: 540 LKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAY 599
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR---WILKELGDSGHA 168
+F + G T +L+ L KA L A +LKE S HA
Sbjct: 600 ALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKETAKSQHA 649
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 181/375 (48%), Gaps = 21/375 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C + ++ MRE G+ P+V TYN+L+ G + + +L L +ML
Sbjct: 222 ILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGE 281
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV ++ L+ L + G+ A +F +MI +TP A +N +++ CK A
Sbjct: 282 GLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEA 341
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +F L++ P++ TY+ILI+GLC R A I +++ G N++TY +++
Sbjct: 342 MALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDG 401
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + K LEI S M G + + T+I + KI L+ A +MV + D
Sbjct: 402 CCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPD 461
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+Y +I+ +CK G ++ A L +M G + YT + L+DGLCK G I A L L
Sbjct: 462 VVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDA-LEL- 519
Query: 301 YMNKIGFD---------------SNLEAYNCIVDRLGKDGKIDHAINVFESME----VKD 341
+ KI F +N AY ++ L +DG+ A+ +F M D
Sbjct: 520 FTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPD 579
Query: 342 SFTYSSMVHNLCKAK 356
Y M+ L + K
Sbjct: 580 EVIYVVMLRGLFQVK 594
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 201/414 (48%), Gaps = 25/414 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM- 60
L+ ++ + + ++ L+R++ + +P+V Y LI ++ C ++L++E L M
Sbjct: 88 LVKSHKPYHACQLAFSELSRLKSSKFTPNV--YGELI-------IVLCKMELVEEALSMY 138
Query: 61 ---GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
G + + N L++ L + G+ + R++++MI L+P TF +++G C+
Sbjct: 139 HKVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDL 198
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
A MF ++ G VP ++ Y ILI+GLC ++ A + + + + G PN TY T+
Sbjct: 199 LRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTL 258
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
M + K L + M +G D + +I K G +K A + M+ V
Sbjct: 259 MDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSV 318
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+I YN+LI+ YCK G + A L E+E+ D +T++ILI GLC + A
Sbjct: 319 TPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGN 378
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 353
E M K G +N YN ++D K+GK+D A+ + M + T+S+++ C
Sbjct: 379 IFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYC 438
Query: 354 KAKRLPSA----SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
K + L +A S++++ L V A++DG G +EA K+ S +
Sbjct: 439 KIRNLQAAMGIYSEMVIKSLSPDV----VTYTAMIDGHCKYGSMKEALKLYSDM 488
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 175/358 (48%), Gaps = 4/358 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F+ + I M G+SP V+T+ +LI G R L + ++ DEM GI P V Y
Sbjct: 163 FELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTI 222
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
L+ L K +EA + + M + P T+N +++G CK ALR+++ + G
Sbjct: 223 LIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEG 282
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP++VT+ ILI GLCK G ++ AR + + PN Y +++ + +
Sbjct: 283 LVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAM 342
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+ ++R + D F Y +I + R +EA + E+M +G+ + V+YN+LI+
Sbjct: 343 ALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGC 402
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
CKEGK++ A + +M + G E + T + LIDG CK N++ A M ++
Sbjct: 403 CKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDV 462
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
Y ++D K G + A+ ++ M + +T S ++ LCK ++ A +L
Sbjct: 463 VTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELF 520
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 201/437 (45%), Gaps = 40/437 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ YC + + ++N + E+G+ P+ VTY+ LI G +N + + + EM G
Sbjct: 269 LMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKG 328
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I V+S NS++ + A +F D + L TFN +L+ LCK + A
Sbjct: 329 IRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLAN-VFTFNTLLSWLCKEGKMNEAC 387
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + G P +V+YN +I G C+ + A + KE+ D+G PNA+T+T +M
Sbjct: 388 NLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGY 447
Query: 182 FRNRKYKLGLEILSAMK-------------------RKGYTFDG---------------- 206
F+ + I MK + G +F+G
Sbjct: 448 FKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTC 507
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T+I F+K G + A++ +M G+ V+Y +LI+ +CK ++ A LL++
Sbjct: 508 MPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLND 567
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+++G + D + LIDG CK ++K A L + G N YN ++
Sbjct: 568 MKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNN 627
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
++ AI++++ M + D TY+S++ L K+ RL AS + L G+ A
Sbjct: 628 VEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTV 687
Query: 383 VVDGLRHSGCRREAKKI 399
+++GL + G A+KI
Sbjct: 688 LINGLCNKGQFENARKI 704
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 179/388 (46%), Gaps = 39/388 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ + + + + GISP+VV+YN++I G R ++ + + EML+ G
Sbjct: 373 LLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNG 432
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ ++ LM F+ G + A +F M ++ P T I++ GLCK +
Sbjct: 433 FTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGR 492
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F GFVP + YN +I G K G + A + +E+ + G P+ +TYT+++
Sbjct: 493 DLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGF 552
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK----------------------- 218
+ L L++L+ MKRKG D Y T+I F K
Sbjct: 553 CKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNR 612
Query: 219 ------------IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ ++EA D ++MV +G+ D+ +Y +LI+ K G+L A + E
Sbjct: 613 FIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTE 672
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M +G D HT+LI+GLC G + AR LE MN ++ YN ++ K+G
Sbjct: 673 MLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGN 732
Query: 327 IDHAINVFESM----EVKDSFTYSSMVH 350
+ A + + M V D+ TY +V+
Sbjct: 733 LQEAFRLHDEMLDRGLVPDNITYDILVN 760
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 183/401 (45%), Gaps = 44/401 (10%)
Query: 50 SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIML 108
+L LL EM G P ++ S++ + G EA R+ DM+ CG ++M
Sbjct: 212 ALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLM- 270
Query: 109 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
G C +AL + + + G VP VTY++LI G CK G + A E+ G
Sbjct: 271 KGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIR 330
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
+ + +I++ + + ++ + + G + F + T+++ K G++ EA +
Sbjct: 331 SSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNL 389
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID---- 284
++++ G+ ++VSYN +I +C++ + AA + EM GF + T TIL+D
Sbjct: 390 WDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFK 449
Query: 285 -------------------------------GLCKAG-NIKGARLHLEYMNKIGFDSNLE 312
GLCKAG + +G L +++++ GF
Sbjct: 450 KGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQ-GFVPTCM 508
Query: 313 AYNCIVDRLGKDGKIDHAINVFESM-EV---KDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
YN I+D K+G I+ A NV+ M EV + TY+S++ CK + A KLL
Sbjct: 509 PYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDM 568
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+ G+++ A ++DG + A ++ +++R A +S
Sbjct: 569 KRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLS 609
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 5/197 (2%)
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
C N Y L L L M+ G+ + +VI A VK G + EA + MV G +
Sbjct: 204 CLKPNSGYALSL--LREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSM 261
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
++ +L+ YC +G L +A +L++E+ + G +K T+++LIDG CK GNI+ A
Sbjct: 262 NLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFY 321
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF-ESME--VKDSFTYSSMVHNLCKAK 356
M G S++ + N I++ K +A +F +++E + + FT+++++ LCK
Sbjct: 322 SEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEG 381
Query: 357 RLPSASKLLLSCLKSGV 373
++ A L + G+
Sbjct: 382 KMNEACNLWDEVIAKGI 398
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 83/206 (40%), Gaps = 42/206 (20%)
Query: 210 CTVIAAF---VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC-------------- 252
CT + F ++ G + EA + Q GV+LD +Y+ ++L C
Sbjct: 159 CTKLYNFPLDIQEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLRE 218
Query: 253 ---------------------KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
KEG + A L D+M G + T L+ G C GN
Sbjct: 219 MRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGN 278
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSS 347
++ A + + +++ G N Y+ ++D K+G I+ A + M+ K ++ +S
Sbjct: 279 LRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNS 338
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSGV 373
++ K + +A + L+SG+
Sbjct: 339 ILEGYLKCQSWQNAFTMFNDALESGL 364
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 192/416 (46%), Gaps = 26/416 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN----SLIAGATRNS--LLSCSLDLLD 55
L+ +YC + Y +LNRM G P V YN S+ +G S LL+ + + +
Sbjct: 350 LVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYE 409
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
EML + + + CL +GK D+A ++ + M+ P T+T++ ++ LC+
Sbjct: 410 EMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAM 469
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
+ A +F+ ++ G +P++ TY ILI CK G + AR E+ G +P+ +TYT
Sbjct: 470 KVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYT 529
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV-- 233
++ + ++ +I M G + Y ++ K G ++A + +M+
Sbjct: 530 ALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGT 589
Query: 234 --------------TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
TD + ++V+Y LI+ CK K+ A LLD M G E + +
Sbjct: 590 SDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIY 649
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV----FE 335
LIDG CK G + A+ M+K G+ + Y ++D + KD ++D AI V E
Sbjct: 650 DALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLE 709
Query: 336 SMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
S + TY++M+ LC+ A KLL K G +++DGL SG
Sbjct: 710 SSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSG 765
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 197/443 (44%), Gaps = 56/443 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID++C+ + + + M G SP VVTY +L+ + + + D+ M++
Sbjct: 495 ILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDA 554
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI----------------CGDLTPCTATF 104
G P+ +Y++L+ L + G+ +A V+ MI + P T+
Sbjct: 555 GCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTY 614
Query: 105 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 164
+++GLCK +A + + +G P + Y+ LI G CK G+L A+ + +
Sbjct: 615 GALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSK 674
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
G+ P TYT+++ F++R+ L +++LS M T + Y +I +IG ++
Sbjct: 675 CGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQK 734
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A + M G ++V+Y +LI+ K GK++ + L +M QG + T+ +LI+
Sbjct: 735 ALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLIN 794
Query: 285 GLCKAGNIKGARLHLEYMNK------------------------IGFDSNLEA------- 313
C AG + A L M + +G LE+
Sbjct: 795 HCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIA 854
Query: 314 --YNCIVDRLGKDGKIDHAINVF-ESMEVKDSF------TYSSMVHNLCKAKRLPSASKL 364
Y ++D K G+++ A+ + E MEV S TY+S++ LC A +L A +L
Sbjct: 855 PVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFEL 914
Query: 365 LLSCLKSGVRILKSAQKAVVDGL 387
+ GV SA ++ GL
Sbjct: 915 YSEITRKGVVPELSAFICLIKGL 937
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 161/339 (47%), Gaps = 5/339 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ +L+ M G P+ + Y++LI G + L + ++ M + G
Sbjct: 617 LIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCG 676
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y SL+ +F+ + D A +V M+ TP T+ M++GLC+ AL
Sbjct: 677 YLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKAL 736
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ ++K G P +VTY LI GL K+G++ + + ++ G APN +TY ++ C
Sbjct: 737 KLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHC 796
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+LS MK+ + GYC+V+ F K + + +E++ + G+
Sbjct: 797 CAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSK--KFIASLGLLEELESHGMVSIA 854
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD---KYTHTILIDGLCKAGNIKGARLH 298
Y LI+ + K G+LE A L EM + + K T+T LI LC A ++ A
Sbjct: 855 PVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFEL 914
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
+ + G L A+ C++ L K K + A+ + SM
Sbjct: 915 YSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSM 953
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 175/407 (42%), Gaps = 13/407 (3%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
C+ ++ L R+++ G P TYN+L+ + + EM E+G D
Sbjct: 183 CRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDK 242
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
++ L + G+ +A + + D T M++GL + D A+
Sbjct: 243 FTVGCFAQALCKEGRWSDALVMIER---EDFKLDTVLCTQMISGLMEASLFDEAISFLHR 299
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
++ + +P +VTY L+ G K +L + I+ + + G PN + +++ R
Sbjct: 300 MRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARD 359
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE------ATDYMEQMVTDGVQLD 240
Y ++L+ M G Y I + L A E+M+ L+
Sbjct: 360 YPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLN 419
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+ C GK + A+ ++ M ++GF D T++ +I LC+A ++ A L +
Sbjct: 420 KVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQ 479
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M +G ++ Y ++D K G I+ A + F+ ME TY++++H K K
Sbjct: 480 EMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTK 539
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++P AS + + +G A+VDGL +G ++A ++ +K+
Sbjct: 540 QVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKM 586
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 164/407 (40%), Gaps = 28/407 (6%)
Query: 30 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 89
D V +I+G SL ++ L M P+V +Y +L+ + + R+
Sbjct: 273 DTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRII 332
Query: 90 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
M+ P + FN +++ C R A ++ + G P V YNI I +C
Sbjct: 333 SMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSG 392
Query: 150 GRLRT------ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
L + A + +E+ S N + +C K+ +I+ M RKG+
Sbjct: 393 EELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFV 452
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y VI + ++++A ++M + GV D+ +Y LI+ +CK G +E A
Sbjct: 453 PDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSW 512
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
DEME G T+T L+ K + A M G N Y+ +VD L K
Sbjct: 513 FDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCK 572
Query: 324 DGKIDHAINVFESM---------------EVKDSF-----TYSSMVHNLCKAKRLPSASK 363
G+ A V+ M E DS TY +++ LCKA ++ A +
Sbjct: 573 AGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQE 632
Query: 364 LLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
LL +G A++DG G A+++ RM+K +
Sbjct: 633 LLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEV--FFRMSKCGY 677
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 115/272 (42%), Gaps = 36/272 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LIDA + D +L++M E+ +P+VVTY ++I G R +L LL M + G
Sbjct: 687 LIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRG 746
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA- 120
P+V +Y SL+ L + GK D + ++F MI P T+ +++N C D A
Sbjct: 747 CNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAH 806
Query: 121 --------------------------------LRMFRGLQKHGFVPELVTYNILIKGLCK 148
L + L+ HG V Y +LI K
Sbjct: 807 SLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSK 866
Query: 149 AGRLRTARWILKELGDSGHAPNAI---TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
AGRL A + KE+ + + N TYT++++ + + E+ S + RKG +
Sbjct: 867 AGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPE 926
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ +I +K+ + EA M +GV
Sbjct: 927 LSAFICLIKGLIKVNKWNEALQLCYSMCDEGV 958
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 8/256 (3%)
Query: 115 RYTDNALRMFRGLQKH-GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
R + +R F ++ G+ YN L + L R RT +L+E+G+
Sbjct: 115 RTPELCVRFFLWAERQVGYSHTGACYNALAEVLHFDDRARTTERLLREIGEDDREVLGRL 174
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
I++ C R+ + LE L +K GY G Y ++ G++ ++M
Sbjct: 175 LNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMS 234
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
G D + CKEG+ A +++ E++ F+ D T +I GL +A
Sbjct: 235 ELGFCTDKFTVGCFAQALCKEGRWSDALVMI---EREDFKLDTVLCTQMISGLMEASLFD 291
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 349
A L M N+ Y ++ K ++ + M + + ++S+V
Sbjct: 292 EAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLV 351
Query: 350 HNLCKAKRLPSASKLL 365
H+ C A+ P A KLL
Sbjct: 352 HSYCNARDYPYAYKLL 367
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 132/353 (37%), Gaps = 54/353 (15%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
YN+L L + R+ +++ D N+++ C++ AL L+
Sbjct: 140 YNALAEVLHFDDRARTTERLLREIGEDDREVLGRLLNVIVRKCCRHGAWAKALEELGRLK 199
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
G+ P TYN L++ L AG++ + KE+ + G + T + + ++
Sbjct: 200 DFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWS 259
Query: 189 LGLEILSAMKRKGYTFDG-----------------------------------FGYCTVI 213
+ L ++R+ + D Y T++
Sbjct: 260 ---DALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLL 316
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
A F+K +L + M+ +G + +N+L++ YC AY LL+ M G
Sbjct: 317 AGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCP 376
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD--------- 324
+ I I +C + L L K+ + A +C+++++
Sbjct: 377 PGYVVYNIFIGSICSGEELPSPDL-LALAEKVY--EEMLASSCVLNKVNTANFARCLCGM 433
Query: 325 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
GK D A + + M V D+ TYS ++ LC+A ++ A L GV
Sbjct: 434 GKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGV 486
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 78/169 (46%), Gaps = 5/169 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C D +++L+ M++ V Y S++ G ++ + SL LL+E+
Sbjct: 791 VLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFI--ASLGLLEELESH 848
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM--ICGDLTPCTA-TFNIMLNGLCKNRYT 117
G+ Y L+ + G+ ++A + ++M + L + T+ ++ LC
Sbjct: 849 GMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQL 908
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+ A ++ + + G VPEL + LIKGL K + A + + D G
Sbjct: 909 EKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEG 957
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 201/437 (45%), Gaps = 40/437 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ YC + + ++N + E+G+ P+ VTY+ LI G +N + + + EM G
Sbjct: 151 LMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKG 210
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I V+S NS++ + A +F D + L TFN +L+ LCK + A
Sbjct: 211 IRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLAN-VFTFNTLLSWLCKEGKMNEAC 269
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + G P +V+YN +I G C+ + A + KE+ D+G PNA+T+T +M
Sbjct: 270 NLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGY 329
Query: 182 FRNRKYKLGLEILSAMK-------------------RKGYTFDG---------------- 206
F+ + I MK + G +F+G
Sbjct: 330 FKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTC 389
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T+I F+K G + A++ +M G+ V+Y +LI+ +CK ++ A LL++
Sbjct: 390 MPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLND 449
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+++G + D + LIDG CK ++K A L + G N YN ++
Sbjct: 450 MKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNN 509
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
++ AI++++ M + D TY+S++ L K+ RL AS + L G+ A
Sbjct: 510 VEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTV 569
Query: 383 VVDGLRHSGCRREAKKI 399
+++GL + G A+KI
Sbjct: 570 LINGLCNKGQFENARKI 586
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 179/388 (46%), Gaps = 39/388 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ + + + + GISP+VV+YN++I G R ++ + + EML+ G
Sbjct: 255 LLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNG 314
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ ++ LM F+ G + A +F M ++ P T I++ GLCK +
Sbjct: 315 FTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGR 374
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F GFVP + YN +I G K G + A + +E+ + G P+ +TYT+++
Sbjct: 375 DLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGF 434
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK----------------------- 218
+ L L++L+ MKRKG D Y T+I F K
Sbjct: 435 CKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNR 494
Query: 219 ------------IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ ++EA D ++MV +G+ D+ +Y +LI+ K G+L A + E
Sbjct: 495 FIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTE 554
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M +G D HT+LI+GLC G + AR LE MN ++ YN ++ K+G
Sbjct: 555 MLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGN 614
Query: 327 IDHAINVFESM----EVKDSFTYSSMVH 350
+ A + + M V D+ TY +V+
Sbjct: 615 LQEAFRLHDEMLDRGLVPDNITYDILVN 642
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 195/464 (42%), Gaps = 75/464 (16%)
Query: 20 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 79
N+M G++ D T + ++ + + + + G+ D +Y+ +H L
Sbjct: 29 NKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLK 88
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
A + ++M P TF ++ K ALR+ + G L
Sbjct: 89 PNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVA 148
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
L+KG C G LR+A ++ E+ +SG PN +TY+ ++ C +N + E S MK
Sbjct: 149 TSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKT 208
Query: 200 KG-----YTFDG-----------------------------FGYCTVIAAFVKIGRLKEA 225
KG Y+ + F + T+++ K G++ EA
Sbjct: 209 KGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEA 268
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID- 284
+ ++++ G+ ++VSYN +I +C++ + AA + EM GF + T TIL+D
Sbjct: 269 CNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDG 328
Query: 285 ----------------------------------GLCKAG-NIKGARLHLEYMNKIGFDS 309
GLCKAG + +G L +++++ GF
Sbjct: 329 YFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQ-GFVP 387
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESM-EV---KDSFTYSSMVHNLCKAKRLPSASKLL 365
YN I+D K+G I+ A NV+ M EV + TY+S++ CK + A KLL
Sbjct: 388 TCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLL 447
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+ G+++ A ++DG + A ++ +++R A +S
Sbjct: 448 NDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLS 491
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 132/282 (46%), Gaps = 7/282 (2%)
Query: 97 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 156
+TP NI+L + + T A + + G + T +++++ K G + A
Sbjct: 1 MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60
Query: 157 WILKELGDSGHAPNAITYTTIMK--CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
+ G + Y+ + C N Y L L L M+ G+ + +VI
Sbjct: 61 QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSL--LREMRAAGWIPPEGTFTSVIT 118
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
A VK G + EA + MV G +++ +L+ YC +G L +A +L++E+ + G
Sbjct: 119 ACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVP 178
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
+K T+++LIDG CK GNI+ A M G S++ + N I++ K +A +F
Sbjct: 179 NKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMF 238
Query: 335 -ESME--VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+++E + + FT+++++ LCK ++ A L + G+
Sbjct: 239 NDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGI 280
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/386 (19%), Positives = 165/386 (42%), Gaps = 40/386 (10%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
++P + N L+ R ++ + +L ++ML +G+ D ++ + ++ + G EA
Sbjct: 1 MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ F + ++I ++ LC + AL + R ++ G++P T+ +I
Sbjct: 61 QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
K G + A + ++ + G + N T++MK
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMK--------------------------- 153
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
GYC G L+ A + ++ G+ + V+Y+ LI+ CK G +E A+ E
Sbjct: 154 -GYCMQ-------GNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSE 205
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+ +G Y+ +++G K + + A + G +N+ +N ++ L K+GK
Sbjct: 206 MKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGK 264
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
++ A N+++ + K + +Y++++ C+ + +A K+ L +G
Sbjct: 265 MNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTI 324
Query: 383 VVDGLRHSGCRREAKKIQSKIRMAKI 408
++DG G A I +++ A I
Sbjct: 325 LMDGYFKKGDIENAFSIFHRMKDANI 350
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 167/333 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ C D Y I+ M +G P+VV Y +LI +NS ++ +L EM E G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD++ YNSL+ L + + DEA +M+ L P T+ ++G + +A
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +++ G +P V LI CK ++ A + + D G +A TYT +M
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+N K EI M+ KG D F Y +I F K+G +++A+ ++MV +G+ ++
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ YN L+ +C+ G++E A LLDEM +G + T+ +IDG CK+G++ A +
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
M G + Y +VD + ++ AI +F
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 187/403 (46%), Gaps = 4/403 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ + ++L M G+S D TY+ LI G + + L+ EM+
Sbjct: 282 VLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSH 341
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI + Y+ + + + G ++A +F MI L P + ++ G C+ +
Sbjct: 342 GINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQG 401
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++K V TY ++KG+C +G L A I+KE+ SG PN + YTT++K
Sbjct: 402 YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKT 461
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+N ++ + +L MK +G D F Y ++I K R+ EA ++ +MV +G++ +
Sbjct: 462 FLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN 521
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y I+ Y + + +A + EM + G +K T LI+ CK + A
Sbjct: 522 AFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYR 581
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G + + Y +++ L K+ K+D A +F M K D F+Y +++ K
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ AS + ++ G+ ++ G SG +AK++
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 171/364 (46%), Gaps = 4/364 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC+ + GY +L M++ I TY +++ G + L + +++ EM+ G
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V Y +L+ Q + +A RV ++M + P +N ++ GL K + D A
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++G P TY I G +A +A +KE+ + G PN + T ++
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K +M +G D Y ++ K ++ +A + +M G+ D+
Sbjct: 568 CKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
SY LIN + K G ++ A + DEM ++G + + +L+ G C++G I+ A+ L+
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M+ G N Y I+D K G + A +F+ M++K DSF Y+++V C+
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 358 LPSA 361
+ A
Sbjct: 748 VERA 751
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 186/419 (44%), Gaps = 50/419 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + Q F +L M+E GI+PD+ YNSLI G ++ + + L EM+E G
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-ICGDLT--------------------PC 100
+ P+ ++Y + + + + A++ ++M CG L C
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEAC 577
Query: 101 TA--------------TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+A T+ +++NGL KN D+A +FR ++ G P++ +Y +LI G
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
K G ++ A I E+ + G PN I Y ++ R+ + + E+L M KG +
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
YCT+I + K G L EA ++M G+ D Y TL++ C+ +E A +
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG- 756
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI---GFD----SNLEAYNCIVD 319
K+G LI+ + K G L E +N++ FD N YN ++D
Sbjct: 757 TNKKGCASSTAPFNALINWVFKFGK---TELKTEVLNRLMDGSFDRFGKPNDVTYNIMID 813
Query: 320 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
L K+G ++ A +F M+ + TY+S+++ K R + + +G+
Sbjct: 814 YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 187/414 (45%), Gaps = 20/414 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC+ + M + GI D TY L+ G +N + + ++ EM G
Sbjct: 563 LINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV+SY L++ +LG +A+ +F +M+ LTP +N++L G C++ + A
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P VTY +I G CK+G L A + E+ G P++ YTT++ C
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV---- 237
R + + I +KG + +I K G+ + T+ + +++ DG
Sbjct: 743 CRLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLM-DGSFDRF 800
Query: 238 -QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
+ + V+YN +I+ CKEG LEAA L +M+ T+T L++G K G
Sbjct: 801 GKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMF 860
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF---------TYSS 347
+ G + + Y+ I++ K+G A+ + + M K++ T +
Sbjct: 861 PVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRA 920
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
++ K + A K+ +++ VR+ A V L + C +++++
Sbjct: 921 LLSGFAKVGEMEVAEKV----MENMVRLQYIPDSATVIELINESCISSNQRVEA 970
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 184/442 (41%), Gaps = 44/442 (9%)
Query: 7 CQFVSFDAGYTILNRMRE-------------------AGISPDVVTYNSLIAGATRNSLL 47
C F SF+ +++ RM E G S D V + L G +
Sbjct: 108 CNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYI 167
Query: 48 SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 107
++ + + + + P + L+ L + + D V++ M+ ++ T++++
Sbjct: 168 EEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHML 227
Query: 108 LNGLCK---------------------NRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ C+ D AL++ + G VP TY++LI GL
Sbjct: 228 IIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGL 287
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK RL A+ +L E+ G + + TY+ ++ + R ++ M G
Sbjct: 288 CKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKP 347
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ Y I K G +++A + M+ G+ +Y +LI YC+E + Y LL E
Sbjct: 348 YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVE 407
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+K+ YT+ ++ G+C +G++ GA ++ M G N+ Y ++ ++ +
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467
Query: 327 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
A+ V + M+ D F Y+S++ L KAKR+ A L+ +++G++ A
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527
Query: 383 VVDGLRHSGCRREAKKIQSKIR 404
+ G + A K ++R
Sbjct: 528 FISGYIEASEFASADKYVKEMR 549
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 147/316 (46%), Gaps = 10/316 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ + + + +I + M E G++P+V+ YN L+ G R+ + + +LLDEM
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ +Y +++ + G EA R+F +M L P + + +++G C+ + A
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH----APNAITYTT 176
+ +F G K G +N LI + K G+ +L L D PN +TY
Sbjct: 752 ITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ + + E+ M+ Y +++ + K+GR E ++ + G
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ-----GFECDKYTHTILIDGLCKAGN 291
++ D + Y+ +IN + KEG A +L+D+M + G + T L+ G K G
Sbjct: 871 IEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGE 930
Query: 292 IKGARLHLEYMNKIGF 307
++ A +E M ++ +
Sbjct: 931 MEVAEKVMENMVRLQY 946
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 208/410 (50%), Gaps = 6/410 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ + +I M + +P+ VT++SLI G + + + L ++ML+
Sbjct: 444 IMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDC 503
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P Y SL+ F+ G+ ++ ++++++M+ +P N ++ + K T+
Sbjct: 504 GHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKG 563
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+FR + HGF+P+ +Y+ILI GL KAG + + + G + Y ++
Sbjct: 564 RALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDG 623
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K ++L MK KG+ Y +VI KI RL EA E+ ++G++L+
Sbjct: 624 FCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLN 683
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V Y++LI+ + K G+++ AYL+++E+ ++G + YT L+D L KA I A + +
Sbjct: 684 VVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQ 743
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + N Y+ +++ L + K + A ++ M+ ++ TY++M+ L KA
Sbjct: 744 SMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAG 803
Query: 357 RLPSASKLLLSCLKSGVRILKSAQ-KAVVDGLRHSGCRREAKKIQSKIRM 405
+ AS L S K+ I SA A+++GL + +A + + R+
Sbjct: 804 NILEASG-LFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRL 852
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/477 (26%), Positives = 203/477 (42%), Gaps = 75/477 (15%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I Y FD Y +L R + G P V+ YN ++ + + +L + +EM
Sbjct: 341 MIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDA 400
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+P +V +YN L+ L + GK + A + DM L P T NIM++ LCK + + A
Sbjct: 401 VP-NVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEAC 459
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT------ 175
+F G+ P VT++ LI GL K GR+ A + +++ D GH P AI YT
Sbjct: 460 SIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSF 519
Query: 176 -----------------------------TIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
T M C F+ + + G + + G+ D
Sbjct: 520 FKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDA 579
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I VK G E + M G LD +YN +I+ +CK GK+ AY LL+E
Sbjct: 580 RSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEE 639
Query: 267 MEKQG---------------------------FECDK--------YTHTILIDGLCKAGN 291
M+ +G FE K ++ LIDG K G
Sbjct: 640 MKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGR 699
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSS 347
I A L +E + + G N+ +NC++D L K +I+ A+ F+SM+ + TYS
Sbjct: 700 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSI 759
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+++ LC+ ++ A K G++ ++ GL +G EA + S+ +
Sbjct: 760 LINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFK 816
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 169/376 (44%), Gaps = 40/376 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI A + D + ++M+E G +V + +LI R + +L LLDEM
Sbjct: 200 ILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSN 259
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ D+ YN + C + GK D + + F +M L P T+ M+ LCK D A
Sbjct: 260 SLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEA 319
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +F L+++ VP YN +I G AG+ A +L+ G P+ I Y I+ C
Sbjct: 320 VELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTC 379
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ R+ + L I MKR D V +
Sbjct: 380 LGKKRRVEEALRIFEEMKR-----------------------------------DAVP-N 403
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +YN LI++ C+EGKL AA + D+ME+ G + T I+ID LCKA ++ A E
Sbjct: 404 VPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFE 463
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
M+ N ++ ++D LGK G++D A +++E M V + Y+S++ + K
Sbjct: 464 GMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCG 523
Query: 357 RLPSASKLLLSCLKSG 372
R K+ + +G
Sbjct: 524 RKEDGHKIYKEMVHTG 539
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 129/282 (45%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
Y + M+E G D YN++I G ++ ++ + LL+EM G PP V +Y S++
Sbjct: 599 YELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDG 658
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
L ++ + DEA +F++ + ++ +++G K D A + L + G P
Sbjct: 659 LAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPN 718
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
+ T+N L+ L KA + A + + D PN ITY+ ++ R RK+
Sbjct: 719 VYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQ 778
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M++ G + Y T+I+ K G + EA+ + +G D SYN +I
Sbjct: 779 EMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSAN 838
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
K AY L +E +G T +L+D L KA ++ A +
Sbjct: 839 KAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAI 880
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 157/378 (41%), Gaps = 38/378 (10%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
YNSL+ RN+ +L+EM G P L+ + K EA + Q M
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
P + + I++ L + R D L +F +Q+ G+ + + LI+ + GR+
Sbjct: 187 RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRV 246
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
A +L E+ + + + Y + C + K + + MK G D Y ++
Sbjct: 247 DAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSM 306
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG- 271
I K RL EA + EQ+ + +YNT+I Y GK + AY LL+ + +G
Sbjct: 307 IGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGS 366
Query: 272 ------FEC---------------------------DKYTHTILIDGLCKAGNIKGARLH 298
+ C + T+ ILID LC+ G + A
Sbjct: 367 IPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEI 426
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
+ M + G N+ N ++DRL K K++ A ++FE M+ K ++ T+SS++ L K
Sbjct: 427 RDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGK 486
Query: 355 AKRLPSASKLLLSCLKSG 372
R+ A L L G
Sbjct: 487 CGRVDDAYSLYEKMLDCG 504
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 153/387 (39%), Gaps = 72/387 (18%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID + D Y++ +M + G P + Y SLI + + EM+ G
Sbjct: 480 LIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTG 539
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ N+ M C+F+ G+ ++ +F+++ P +++I+++GL K +
Sbjct: 540 CSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETY 599
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++ G V + YN +I G CK+G++ A +L+E+ GH P +TY +++
Sbjct: 600 ELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGL 659
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + K G + Y ++I F K+GR+ EA ME+++ G+ ++
Sbjct: 660 AKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNV 719
Query: 242 -----------------------------------VSYNTLINLYCKEGKLEAAYLLLDE 266
++Y+ LIN C+ K A++ E
Sbjct: 720 YTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQE 779
Query: 267 MEKQGFECDKYTHTILI-----------------------------------DGLCKAGN 291
M+K G + + T+T +I +GL A
Sbjct: 780 MQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANK 839
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIV 318
A E G N+ C+V
Sbjct: 840 AMDAYALFEETRLKG--CNIHTKTCVV 864
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 38/300 (12%)
Query: 100 CTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL 159
C +N +L + +N D+ R+ + GF P L+ K+ +LR A I+
Sbjct: 124 CPEAYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDII 183
Query: 160 KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 219
+ + P YT ++ R+ L + M+ GY + + T+I F +
Sbjct: 184 QTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFARE 243
Query: 220 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
GR+ A +++M ++ + DIV YN I+ + K GK++ ++ EM+ G D T+
Sbjct: 244 GRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTY 303
Query: 280 TILIDGLCKAGNIKGARLHLEYMNK--------------IGFDS---------------- 309
T +I LCKA + A E + + +G+ S
Sbjct: 304 TSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKA 363
Query: 310 -----NLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYSSMVHNLCKAKRLPSA 361
++ AYNCI+ LGK +++ A+ +FE M+ V + TY+ ++ LC+ +L +A
Sbjct: 364 KGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAA 423
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 3/170 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+DA + + M++ P+ +TY+ LI G R + + EM ++G
Sbjct: 725 LLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLG 784
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +Y +++ L + G EA+ +F P +A++N M+ GL +A
Sbjct: 785 LKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAY 844
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR---WILKELGDSGHA 168
+F + G T +L+ L KA L A +LKE S HA
Sbjct: 845 ALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKETAKSQHA 894
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 173/364 (47%), Gaps = 4/364 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ Y + IL+ M + + +V TY LI +R+S + + L DEML+ G
Sbjct: 229 LLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKG 288
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV+ Y S+++ + G A +F +M L P T+ ++NG CK A
Sbjct: 289 IEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAE 348
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M +Q G V +N L+ G CK G + A + + G +A T I
Sbjct: 349 MMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGF 408
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ + + +L M+ +G + + +I + K EA + M G +
Sbjct: 409 CRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSV 468
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN I YCK+GK+E AY L++EM+++G D YT+T LIDG +GN+ A
Sbjct: 469 VTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNE 528
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M ++G + N+ Y I+ L KDG+ D A +++ M V D YSS++ +L K
Sbjct: 529 MPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGP 588
Query: 358 LPSA 361
L S
Sbjct: 589 LVSG 592
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 163/339 (48%), Gaps = 1/339 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLI+ Y + + + + M + GI PDV Y S+I + + + L DEM E
Sbjct: 263 MLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTER 322
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P+ ++Y +L++ + G+ A + DM + FN +++G CK D A
Sbjct: 323 RLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEA 382
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
LR+ +Q+ GF + T NI+ G C++ R A+ +L + + G APN ++++ ++
Sbjct: 383 LRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDI 442
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + + M++KG Y I + K G+++EA + +M G+ D
Sbjct: 443 YCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPD 502
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y +LI+ G ++ A L +EM + G + T+T++I GL K G A +
Sbjct: 503 TYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYD 562
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI-NVFESME 338
MNK G + Y+ ++ L K G + + NV + +E
Sbjct: 563 EMNKEGIVPDDGIYSSLIASLHKVGPLVSGLENVVDRIE 601
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 185/397 (46%), Gaps = 8/397 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
ML Y FD+ + + R+ G D + + R+ + ++ L +M++
Sbjct: 123 MLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDS 182
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI V S+ +++ L + G+ A + +++C P T+N +LNG + +
Sbjct: 183 GIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGV 242
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK- 179
+ ++K+ + TY +LI+ ++ ++ A + E+ G P+ YT+I+
Sbjct: 243 NEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINW 302
Query: 180 -CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
C F N K L M + + + Y +I K G +K A + M + GV
Sbjct: 303 NCKFGNMKRAFVL--FDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVD 360
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
++ V +NTL++ YCK+G ++ A L + M+++GFE D +T I+ G C++ + A+
Sbjct: 361 VNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRL 420
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
L M + G N+ +++ ++D K+ A +F+ ME K TY++ + CK
Sbjct: 421 LLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCK 480
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
++ A KL+ + G+ +++DG R SG
Sbjct: 481 KGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASG 517
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 146/347 (42%), Gaps = 59/347 (17%)
Query: 114 NRYTDNALRMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
N T + LR F L Q P+L + IL L +A + + +LK + + G+ + +
Sbjct: 41 NLPTRSCLRFFDFLRQNPSRKPDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNV 100
Query: 173 TY------------TTIMKCC---FR----NRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
+ + K C FR NR + LE+ ++KG+ D +
Sbjct: 101 ERIVSSIGGEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFL 160
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
A + G ++ +++ QMV G+++ + S+ +++ CK+G++ A L+DE+ +GF+
Sbjct: 161 LALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFK 220
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
T+ L++G + ++ G L M K D N+ Y +++ + KI+ A +
Sbjct: 221 PSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKL 280
Query: 334 FESME---------------------------------------VKDSFTYSSMVHNLCK 354
F+ M V +++TY ++++ CK
Sbjct: 281 FDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACK 340
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
A + +A ++ GV + + ++DG G EA ++Q+
Sbjct: 341 AGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQN 387
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 183/376 (48%), Gaps = 19/376 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ A +L R+ + + V YN++I G ++ ++ + DL EM+ G
Sbjct: 166 LIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKG 225
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V +Y++L+ F +GK +A +F +I ++ P TFNI+++G CK+R
Sbjct: 226 ISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGK 285
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + K G +P++VTYN L+ G C + TA+ I + G P+ +Y ++
Sbjct: 286 TVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGF 345
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +K + + + M K + Y ++I K GR+ A ++QM GV +I
Sbjct: 346 CKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNI 405
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN++I+ K +++ A L+ + + QG + YT+TILIDGLCK
Sbjct: 406 LTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVE----------- 454
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
G+D + YN ++ K G D A+++ M+ + ++ TY + +L
Sbjct: 455 ----GYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNE 510
Query: 358 LPSASKLLLSCLKSGV 373
A KL + G+
Sbjct: 511 NDKAEKLFREMITRGL 526
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 183/395 (46%), Gaps = 12/395 (3%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D ++ NR+ +P +N ++ ++ L L +M GI P++++ N L
Sbjct: 68 DDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNIL 127
Query: 73 MHCLFQLGK-PDEANRVF---QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
++C QLG P + ++ F ++ ++ +++GLCK T AL + + +
Sbjct: 128 IYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVD 187
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
V YN +I G+CK + A + E+ G +PN +TY+ ++ F K K
Sbjct: 188 GKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLK 247
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
+++ + + + DG+ + ++ F K ++KE M+ G+ D+V+YN+L+
Sbjct: 248 DAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLM 307
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
+ YC ++ A + + M + G D ++ ILI+G CK + A M+
Sbjct: 308 DGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNII 367
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
N+ YN ++D L K G+I +A+ + + M + + TY+S++ L K ++ A L
Sbjct: 368 PNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIAL 427
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ G++ ++DGL C+ E I
Sbjct: 428 ITKFKDQGIQPSMYTYTILIDGL----CKVEGYDI 458
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 128/271 (47%), Gaps = 15/271 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D +C+ G T+ M + GI PDVVTYNSL+ G ++ + + + M +
Sbjct: 270 ILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQG 329
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD+ SYN L++ ++ K D+A +F +M C ++ P T+N +++GL K+ A
Sbjct: 330 GVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYA 389
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L++ + G P ++TYN +I L K ++ A ++ + D G P+ TYT ++
Sbjct: 390 LQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILID- 448
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
GL K +GY Y +I F K G EA + +M +
Sbjct: 449 ---------GL-----CKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPN 494
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
V+Y I + + A L EM +G
Sbjct: 495 AVTYEITIRSLLDNNENDKAEKLFREMITRG 525
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 177/340 (52%), Gaps = 3/340 (0%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
SPD++TYN L+ G + + L+ E+L+ G P+V++Y+ +++C +L K +EA
Sbjct: 205 SPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWE 264
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
VF MI + P TFN ++ G CK ++A+++F ++K G +VTYN LI LC
Sbjct: 265 VFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLC 324
Query: 148 KA-GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
K G + TA + +L +G P +TY ++++ R+ ++ M+ K +
Sbjct: 325 KKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAP-NV 383
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I K+ R+KEA +E M G +V+Y LIN +CK G+L++A L ++
Sbjct: 384 ITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEK 443
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+ G + LIDGLCKA L +M+ G ++ YNC++ L +
Sbjct: 444 MKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANR 503
Query: 327 IDHAINVFESMEVKDSF-TYSSMVHNLCKAKRLPSASKLL 365
++ A +F+ M + T++ ++ LC K++ A +L
Sbjct: 504 VEDAQRLFDGMACAPNVTTFNFLIRGLCAQKKVEEARNIL 543
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 193/415 (46%), Gaps = 13/415 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C+ ++ + M+ +G+ P+ T N+L+ G +S +L L EM
Sbjct: 37 VLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAG 96
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN- 119
P S+N L+ F G+ +A QDM + T T+N++L GLC + N
Sbjct: 97 PFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANR 156
Query: 120 ---ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
A+ F+ ++ G P+L +Y+IL+ L +GR+ A + + S P+ +TY
Sbjct: 157 LEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNV 213
Query: 177 IMKC-CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
+M C + Y+ ++ + + GY + F Y +I + K+ +++EA + +M+
Sbjct: 214 LMDGYCKIGQTYE-AQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIES 272
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA-GNIKG 294
+ V++NTLI +CK G LE A L EMEK G + T+ LID LCK G +
Sbjct: 273 NCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYT 332
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---DSFTYSSMVHN 351
A + G + YN ++ ++ A+ F+ ME K + TYS ++
Sbjct: 333 AVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNVITYSILIDG 392
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
LCK +R+ A+K L G +++G G + A K+++A
Sbjct: 393 LCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLA 447
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 170/344 (49%), Gaps = 12/344 (3%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
+P+ TYN LI G + + ++ + +M G+ P+ + N+L+ L ++G+ A
Sbjct: 28 FAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSAL 87
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
++F++M G P +A+ NI+L G +AL + ++K TYN+++KGL
Sbjct: 88 KLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGL 147
Query: 147 C----KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
C A RL A KE+ SG P+ +Y ++ + + + SAM
Sbjct: 148 CWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---C 204
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
+ D Y ++ + KIG+ EA M++++ G + ++ +Y+ +IN YCK K+E A+
Sbjct: 205 SPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWE 264
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL- 321
+ +M + + T LI G CKAG ++ A M KIG + + YN ++D L
Sbjct: 265 VFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLC 324
Query: 322 GKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 361
K G + A+++F +E TY+S++ C A+RL A
Sbjct: 325 KKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEA 368
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 143/303 (47%), Gaps = 44/303 (14%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG-------------------- 40
++I+ YC+ + + + +M E+ P+ VT+N+LIAG
Sbjct: 248 IIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKI 307
Query: 41 ------ATRNSLLS----------CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 84
T N+L+ ++DL +++ G+ P + +YNSL+ + E
Sbjct: 308 GCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSE 367
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
A + F +M G P T++I+++GLCK R A + ++ HG+ P +VTY LI
Sbjct: 368 AMQYFDEME-GKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLIN 426
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
G CK G L++A +++ +G APN + + T++ + + GL +L M +G
Sbjct: 427 GFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKP 486
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL--DIVSYNTLINLYCKEGKLEAAYL 262
D Y +I+ R+++A Q + DG+ ++ ++N LI C + K+E A
Sbjct: 487 DVITYNCLISGLCSANRVEDA-----QRLFDGMACAPNVTTFNFLIRGLCAQKKVEEARN 541
Query: 263 LLD 265
+LD
Sbjct: 542 ILD 544
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 169/350 (48%), Gaps = 4/350 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P +++L + + +L +M + P S N L+H +LGK D R
Sbjct: 61 PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
F+DMI P T+NIM++ +CK + A +F ++ G +P+ VTYN +I G K
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
GRL + +E+ P+ ITY T++ C + K GLE MK+ G +
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVS 240
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y T++ AF K +++A + M G+ + +Y +L++ YCK G L A+ L DEM
Sbjct: 241 YSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMS 300
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
+ G E + T+T LIDGLC IK A M G NL +Y ++ K +D
Sbjct: 301 QVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMD 360
Query: 329 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
A+ + + M+ + D Y + + +LC +++ +A ++ + G++
Sbjct: 361 RALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIK 410
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 202/413 (48%), Gaps = 7/413 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ +A + M+ G+ PD VTYNS+I G + L ++ +EM M
Sbjct: 138 IMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSM 197
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV +YN+L++C + GK + F++M L P +++ +++ CK A
Sbjct: 198 SCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQA 257
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L+ + +++ G VP TY L+ CK G L A + E+ G N +TYT ++
Sbjct: 258 LKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDG 317
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K E+ M G + Y +I FVK + A + +++M G++ D
Sbjct: 318 LCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPD 377
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++ Y T I C K+EAA ++++EM+++G + + + +T L+D K+ N LE
Sbjct: 378 LLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLE 437
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-----VKDSFTYSSMVHNLCKA 355
M ++ + + ++D L K+ + AI+ F + ++ Y++M+ LCK
Sbjct: 438 EMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKE 497
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
++ +A+ L + G+ ++A +++DG G +A ++ K MA+I
Sbjct: 498 DQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDK--MAEI 548
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 152/309 (49%), Gaps = 1/309 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+DA+C+ MR G+ P+ TY SL+ + LS + L DEM ++G
Sbjct: 244 LVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVG 303
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ +V +Y +L+ L + + EA +F M+ + P A++ +++G K + D AL
Sbjct: 304 VEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRAL 363
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++ G P+L+ Y I LC ++ A+ ++ E+ + G N YTT+M
Sbjct: 364 ELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAY 423
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLD 240
F++ GL +L M +C +I K + +A DY ++ D G+Q +
Sbjct: 424 FKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQAN 483
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
Y +I+ CKE ++EAA L ++M ++G D+ +T LIDG K GN+ A +
Sbjct: 484 AAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRD 543
Query: 301 YMNKIGFDS 309
M +IG +S
Sbjct: 544 KMAEIGVES 552
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 153/349 (43%), Gaps = 22/349 (6%)
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL------------------TPCTA 102
G + SY + H LF +ANR+ ++M+ P
Sbjct: 5 GFKHTIESYCIVAHILFCARMYYDANRILREMVLSKAELKDCDVFDVLWSTRNVCVPGFG 64
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
F+ + + L + + AL+ F +++ P+ + N L+ + G+ + K++
Sbjct: 65 VFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDM 124
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
+G P TY ++ C + + + MK +G D Y ++I + K+GRL
Sbjct: 125 IGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRL 184
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
+ + E+M + + D+++YNTLIN +CK GKL EM++ G + + +++ L
Sbjct: 185 DDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTL 244
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 340
+D CK ++ A M ++G N Y +VD K G + A + + M
Sbjct: 245 VDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGV 304
Query: 341 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ TY++++ LC +R+ A +L + +GV ++ A++ G
Sbjct: 305 EWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGF 353
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 188/375 (50%), Gaps = 3/375 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC +++L + + G P++VT+N+LI G N ++S ++ +++
Sbjct: 95 ILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAK 154
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P D +SY SL++ L + G+ +A ++ Q M + P T++ +++GLCK+R +A
Sbjct: 155 GYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADA 214
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
LR+F + G + ++V YN LI G C G+ R A +L + P+ T+ ++
Sbjct: 215 LRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDA 274
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + + M ++G D Y ++ F + EA + +MV G++ D
Sbjct: 275 LCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPD 334
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++YN LIN YCK ++ A +L E+ + + T+ LIDGLCK G + + ++
Sbjct: 335 VLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVD 394
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV---KDSFTYSSMVHNLCKAKR 357
M G ++ YN +D K + AI++F + D + Y +V N CK ++
Sbjct: 395 EMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWPDFYMYDVIVENFCKGEK 454
Query: 358 LPSASKLLLSCLKSG 372
L A + L L G
Sbjct: 455 LKIAEEALQHLLIHG 469
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 185/376 (49%), Gaps = 5/376 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ +L +M E + P+++TY+++I G ++ L++ +L L + G
Sbjct: 166 LINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRG 225
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I DV +YNSL+H +G+ EA R+ M+ G++ P TFNI+++ LCK A
Sbjct: 226 ILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQ 285
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + K G P++VTYN L++G C + + AR + + G P+ + Y ++
Sbjct: 286 GVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGY 345
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + ++ K + Y ++I K+GR+ + +++M G DI
Sbjct: 346 CKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDI 405
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN ++ +CK E A L ++ QG D Y + ++++ CK +K A L++
Sbjct: 406 VTYNIFLDAFCKSKPYEKAISLFRQI-VQGIWPDFYMYDVIVENFCKGEKLKIAEEALQH 464
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G N+ Y +++ L KD D A+ + M+ D+ T+ +++ L +
Sbjct: 465 LLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNE 524
Query: 358 LPSASKLLLSCLKSGV 373
A KL L ++ G+
Sbjct: 525 TDKAEKLRLEMIERGL 540
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 161/351 (45%), Gaps = 39/351 (11%)
Query: 54 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 113
+ ML PP ++ ++ L+ + ++G A +F + +TP AT I++N C
Sbjct: 43 FNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCH 102
Query: 114 NRYTDNALRMFRGLQKHGFVPELVTYNIL------------------------------- 142
+ A + + K GF P +VT+N L
Sbjct: 103 QAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFS 162
Query: 143 ----IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
I GLCK G+ R A +L+++ + PN ITY+T++ ++R L + S +
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVT 222
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
+G D Y ++I +G+ +EAT + MV + D ++N L++ CKEG++
Sbjct: 223 SRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIV 282
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A + M K+G + D T+ L++G C + N+ AR M K G + ++ YN ++
Sbjct: 283 EAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLI 342
Query: 319 DRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLL 365
+ K +D A+ +F+ + K+ TY+S++ LCK R+ +L+
Sbjct: 343 NGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELV 393
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 131/296 (44%), Gaps = 4/296 (1%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
D+ F M+ P F+ +L + + + A+ +F L G P + T IL
Sbjct: 37 DDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTIL 96
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
I C L A +L + G PN +T+ T++ N + + KGY
Sbjct: 97 INCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGY 156
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
D F Y ++I K G+ ++A +++M D V+ ++++Y+T+I+ CK+ + A
Sbjct: 157 PLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALR 216
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
L + +G D + LI G C G + A L M + + + +N +VD L
Sbjct: 217 LFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALC 276
Query: 323 KDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
K+G+I A VF M E D TY++++ C + + A +L +K G+
Sbjct: 277 KEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLE 332
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 117/239 (48%), Gaps = 1/239 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ +C + + NRM + G+ PDV+ YN LI G + ++ ++ L E+
Sbjct: 306 LMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKN 365
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++ +YNSL+ L +LG+ + +M +P T+NI L+ CK++ + A+
Sbjct: 366 LVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAI 425
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + + G P+ Y+++++ CK +L+ A L+ L G PN TYT ++
Sbjct: 426 SLFRQIVQ-GIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINAL 484
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ + + +LS M D + T+I A + +A +M+ G+ D
Sbjct: 485 CKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVND 543
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 130/291 (44%), Gaps = 7/291 (2%)
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
D L R L+KH P + ++ L+ + + G TA + +L G P+ T T +
Sbjct: 38 DTLLSFNRMLRKHP-PPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTIL 96
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ C +L + + G+ + + T+I F G + +A + ++ G
Sbjct: 97 INCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGY 156
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
LD SY +LIN CK G+ A LL +ME+ + T++ +IDGLCK I A
Sbjct: 157 PLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALR 216
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-----DSFTYSSMVHNL 352
+ G ++ AYN ++ G+ A + +M V+ D +T++ +V L
Sbjct: 217 LFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLL-TMMVRGNINPDDYTFNILVDAL 275
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
CK R+ A + +K G + A+++G S EA+++ +++
Sbjct: 276 CKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRM 326
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 1/178 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ D + +R + P++ TYNSLI G + +SC +L+DEM +
Sbjct: 340 VLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDR 399
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN + + ++A +F+ ++ G + P +++++ CK A
Sbjct: 400 GQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQG-IWPDFYMYDVIVENFCKGEKLKIA 458
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
+ L HG P + TY I+I LCK A +L ++ D+ P+A+T+ TI+
Sbjct: 459 EEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETII 516
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+A C+ SFD T+L++M + PD VT+ ++I + + L EM+E
Sbjct: 479 IMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIER 538
Query: 61 GIPPD 65
G+ D
Sbjct: 539 GLVND 543
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 177/367 (48%), Gaps = 4/367 (1%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
S D + N M E GI P VVTYN+++ + + +L LL +M +MG P+ +YN
Sbjct: 170 SIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYN 229
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
L++ L G+ ++A + Q+M+ L T++ ++ G C+ D A R+ +
Sbjct: 230 VLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSR 289
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G VP LVTYN ++ GLCK GR+ AR +L + + P+ ++Y T++ R
Sbjct: 290 GAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEA 349
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+ + ++ +G Y T+I ++G L A ++M+ G D+ ++ L+
Sbjct: 350 FLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRG 409
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+CK G L A L DEM +G + D++ + I G K G+ A E M GF +
Sbjct: 410 FCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPD 469
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLL 366
L YN +D L K G + A + + M V D TY+S++H A L A + L
Sbjct: 470 LITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFL 529
Query: 367 SCLKSGV 373
L G+
Sbjct: 530 EMLSKGI 536
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 188/390 (48%), Gaps = 4/390 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D++C+ +L +M++ G P+ VTYN L+ G + + L + +L+ EML +G
Sbjct: 196 MLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLG 255
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ ++Y+ L+ + G+ DEA+R+ ++M+ P T+N ++ GLCK +A
Sbjct: 256 LEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDAR 315
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + +P+LV+YN LI G + G + A + EL G P+ +TY T++
Sbjct: 316 KLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGL 375
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + + + M + G D F + ++ F K+G L A + ++M+ G+Q D
Sbjct: 376 CRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDR 435
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y T I K G A+ + +EM +GF D T+ + IDGL K GN+K A ++
Sbjct: 436 FAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKK 495
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKR 357
M G + Y I+ G + A VF M K F TY+ ++H+ R
Sbjct: 496 MLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGR 555
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
L A + GV A+++GL
Sbjct: 556 LKLAILHFFEMHEKGVHPNVITYNALINGL 585
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 172/342 (50%), Gaps = 7/342 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI Y + + + + +R G+ P VVTYN+LI G R L ++ L DEM++ G
Sbjct: 336 LIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHG 395
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV+++ L+ +LG A +F +M+ L P + + G K A
Sbjct: 396 PDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAF 455
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + GF P+L+TYN+ I GL K G L+ A ++K++ +G P+ +TYT+I+
Sbjct: 456 GMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAH 515
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + M KG Y +I ++ GRLK A + +M GV ++
Sbjct: 516 LMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNV 575
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLE 300
++YN LIN CK K++ AY EM+ +G +KYT+TILI+ C G+ + A RL+ +
Sbjct: 576 ITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKD 635
Query: 301 YMNK-IGFDSNLEAYNCIVDRLGKDGK---IDHAINVFESME 338
+++ I DS ++ ++ L KD K + H NV + E
Sbjct: 636 MLDREIQPDSC--THSALLKHLNKDYKSHVVRHLENVIAAGE 675
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 170/361 (47%), Gaps = 10/361 (2%)
Query: 23 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 82
R+ G +TY ++ RN L+ + ++++++ + + V L L+ K
Sbjct: 73 RQTGFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIYAKK 132
Query: 83 DEANR---VFQDMICGDLTPCTATFNIMLNGLCKNRYT--DNALRMFRGLQKHGFVPELV 137
+ VF M+ + P N +L L ++R + D A ++ + + G P +V
Sbjct: 133 SMLEKCLLVFYKMVSKGMLPDLKNCNRVLR-LLRDRDSSIDVAREVYNVMVECGIRPTVV 191
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN ++ CK G+++ A +L ++ G PN +TY ++ + + + E++ M
Sbjct: 192 TYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEM 251
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
R G + Y +I + + G+L EA+ E+M++ G +V+YNT++ CK G++
Sbjct: 252 LRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRV 311
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A LLD M + D ++ LI G + GNI A L + G ++ YN +
Sbjct: 312 SDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTL 371
Query: 318 VDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+D L + G +D A+ + + M D FT++ +V CK LP A +L L G+
Sbjct: 372 IDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGL 431
Query: 374 R 374
+
Sbjct: 432 Q 432
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 117/256 (45%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ + + + M G+ PD Y + I G + S + + +EML
Sbjct: 405 ILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLAR 464
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PPD+ +YN + L +LG EA+ + + M+ L P T+ +++ + A
Sbjct: 465 GFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKA 524
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G P +VTY +LI GRL+ A E+ + G PN ITY ++
Sbjct: 525 RAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALING 584
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ RK + + M+ KG + + + Y +I +G +EA + M+ +Q D
Sbjct: 585 LCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPD 644
Query: 241 IVSYNTLINLYCKEGK 256
+++ L+ K+ K
Sbjct: 645 SCTHSALLKHLNKDYK 660
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 323 KDGKIDHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
+D ID A V+ M ++ + TY++M+ + CK ++ A +LLL K G
Sbjct: 167 RDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDV 226
Query: 379 AQKAVVDGLRHSGCRREAKK-IQSKIRMA 406
+V+GL HSG +AK+ IQ +R+
Sbjct: 227 TYNVLVNGLSHSGELEQAKELIQEMLRLG 255
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 163/326 (50%), Gaps = 4/326 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + T++N M ++ I PDV T N+++ + +++ + D++D M+ G
Sbjct: 191 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG 250
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ P+V +YN+LM HCL + D A +VF M+ D ++N ++NG CK + D
Sbjct: 251 VEPNVVTYNALMDGHCL--RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDK 308
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+ +F + + P VTYN LI GLC GRL+ A + E+ G P+ +TY T+
Sbjct: 309 AMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSD 368
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+NR + +L A++ + D Y T++ + G L++A D + + G+Q
Sbjct: 369 YLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQP 428
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
++ +YN +I+ CK+G L A L EM K G + T+ ++ G + L
Sbjct: 429 NVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELL 488
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDG 325
E M GF ++ +V L DG
Sbjct: 489 EEMLARGFSVDVSTTTLLVGMLSDDG 514
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 191/377 (50%), Gaps = 6/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I++ C D ++ L ++ + G PD T+ +LI G + +L L D+M+
Sbjct: 85 IVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE 144
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V +Y +L++ L + + EA +F +MI ++P T+N +++GLCK +
Sbjct: 145 GFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHV 204
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + +P++ T N ++ LCK G + A ++ + G PN +TY +M
Sbjct: 205 TTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDG 264
Query: 181 -CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
C RN + + +++ M K + Y T+I + KI + +A E+M +
Sbjct: 265 HCLRN-EVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTP 323
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ V+YNTLI+ C G+L+ A L EM +G D T+ L D LCK ++ A L
Sbjct: 324 NTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL 383
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ + +D +++ Y I+D + + G+++ A ++F ++ K + +TY+ M+H LCK
Sbjct: 384 KAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQ 443
Query: 356 KRLPSASKLLLSCLKSG 372
L ASKL K+G
Sbjct: 444 GLLAEASKLFSEMNKNG 460
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 186/400 (46%), Gaps = 4/400 (1%)
Query: 8 QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 67
F + D + NRM P V +N L+ + S L L +M GIPPDV+
Sbjct: 22 HFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVY 81
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+ +++ L L + D A ++ P TF ++ GLC AL +F +
Sbjct: 82 TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 141
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
GF P +VTY LI GLCK ++ A I E+ G +PN +TY +++ + ++
Sbjct: 142 IGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEW 201
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
K +++ M D F TV+ A K G + EA D ++ M+ GV+ ++V+YN L
Sbjct: 202 KHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNAL 261
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
++ +C +++ A + D M + + ++ LI+G CK ++ A E M++
Sbjct: 262 MDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQEL 321
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASK 363
N YN ++ L G++ AI++F M ++ D TY ++ LCK + L A
Sbjct: 322 TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMA 381
Query: 364 LLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
LL + S ++DG+ +G +A+ + S +
Sbjct: 382 LLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNL 421
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 167/351 (47%), Gaps = 13/351 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+++C +++L ++ + G PDVVTY +L+ G L +M+
Sbjct: 621 ILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNG-------------LCKMITK 667
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD+++YNSL+H L L + + +M+ + P F+ +++ LCK A
Sbjct: 668 GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIA 727
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K G P++VTY L+ G C + A + + G PN +Y ++
Sbjct: 728 HDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILING 787
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ + +L M +G D Y T+I +GRL+ A +MV G D
Sbjct: 788 YCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPD 847
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+Y L++ CK L A +LL +E + D + I IDG+C+AG ++ AR
Sbjct: 848 LVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFS 907
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHN 351
++ G ++ YN ++ L K G +D A +F M+ D ++ S+ N
Sbjct: 908 NLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTSSRN 958
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 181/405 (44%), Gaps = 4/405 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + ++M G P+VVTY +LI G ++ ++ + ++ EM+ G
Sbjct: 121 LIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKG 180
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P++ +YNSL+H L +L + + +M+ + P T N +++ LCK A
Sbjct: 181 ISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAH 240
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P +VTYN L+ G C + A + + N I+Y T++
Sbjct: 241 DVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGY 300
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + + M R+ T + Y T+I +GRL++A +MV G D+
Sbjct: 301 CKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDL 360
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y TL + CK L+ A LL +E ++ D +T ++DG+C+AG ++ AR
Sbjct: 361 VTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSN 420
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
++ G N+ YN ++ L K G + A +F M + TY+ + +
Sbjct: 421 LSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNE 480
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 402
+LL L G + S +V L G + K+I K
Sbjct: 481 ALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCK 525
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 180/369 (48%), Gaps = 19/369 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ + + + ++ +M GI PDV T N LI L + +L ++L++G
Sbjct: 587 LLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLG 646
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV +Y +LM+ L + MI ++P T+N +++ LC +
Sbjct: 647 FQPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLIHALCNLCEWKHVT 693
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC- 180
+ + +P +V ++ ++ LCK G + A ++ + G P+ +TYT +M
Sbjct: 694 TLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGH 753
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C R+ + +++ M KG + Y +I + +I R+ +A +EQM G+ D
Sbjct: 754 CLRSEMDE-AVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIAD 812
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+YNTLI+ C G+L+ A L EM G D T+ IL+D LCK ++ A + L+
Sbjct: 813 TVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLK 872
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
+ D+++ YN +D + + G+++ A ++F ++ K D TY+ M+H LCK
Sbjct: 873 AIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRG 932
Query: 357 RLPSASKLL 365
L A+KL
Sbjct: 933 LLDEANKLF 941
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 179/422 (42%), Gaps = 63/422 (14%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I C+ + + M + G SP+ TYN + G RN+ +++LL+EML
Sbjct: 435 IMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLAR 494
Query: 61 GIPPDVWSYNSLMHCLFQLG----------KP---------------------------- 82
G DV + L+ L G KP
Sbjct: 495 GFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHS 554
Query: 83 --------DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
D+A F M+ P T F +L + K ++ L + + G P
Sbjct: 555 RSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPP 614
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
++ T NILI C RL A +L +L G P+ +TY T+M L
Sbjct: 615 DVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNG-------------L 661
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
M KG + D F Y ++I A + K T + +MV + ++V ++T+++ CKE
Sbjct: 662 CKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKE 721
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
G + A+ ++D M K+G E D T+T L+DG C + A + M G N+ +Y
Sbjct: 722 GMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY 781
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
N +++ + ++D A+ + E M ++ D+ TY++++H LC RL A L +
Sbjct: 782 NILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVA 841
Query: 371 SG 372
SG
Sbjct: 842 SG 843
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 159/343 (46%), Gaps = 6/343 (1%)
Query: 60 MGIPPDVWS--YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
+ +PP S +N+ DEA F M+ P T FN +L + K ++
Sbjct: 2 LSLPPPFLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHH 61
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
L + R + G P++ T I+I LC R+ A L ++ GH P+A T+TT+
Sbjct: 62 STLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTL 121
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
++ K L + M +G+ + Y T+I K ++ EA + +M+T G+
Sbjct: 122 IRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGI 181
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+IV+YN+LI+ CK + + L++EM D +T ++D LCK G + A
Sbjct: 182 SPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHD 241
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLC 353
++ M G + N+ YN ++D ++D A+ VF++M KD +Y+++++ C
Sbjct: 242 VVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYC 301
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
K + + A L + + ++ GL H G ++A
Sbjct: 302 KIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDA 344
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 166/400 (41%), Gaps = 52/400 (13%)
Query: 8 QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 67
F + D + NRM P V + L+ + S L L +M GIPPDV+
Sbjct: 558 HFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVY 617
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+ N L++ L + A V ++ P T+ ++NGLCK +
Sbjct: 618 TLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------M 664
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
G P++ TYN LI LC + +L E+ +S PN + ++T
Sbjct: 665 ITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFST----------- 713
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
V+ A K G + A D ++ M+ GV+ D+V+Y L
Sbjct: 714 ------------------------VVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTAL 749
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
++ +C +++ A + D M +G + ++ ILI+G C+ + A LE M+ G
Sbjct: 750 MDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGL 809
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASK 363
++ YN ++ L G++ HAI +F M ++ D TY ++ LCK L A
Sbjct: 810 IADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMV 869
Query: 364 LLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
LL + S + +DG+ +G A+ + S +
Sbjct: 870 LLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNL 909
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 196/392 (50%), Gaps = 14/392 (3%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM--------LEMGI 62
+F+ ++ +M E I P+VVT+ LI + + +L++L++M + + +
Sbjct: 320 NFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSV 379
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD-LTPCTATFNIMLNGLCKNRYTDNAL 121
PDV YN+L+ L ++G+ E + + M P T T+N +++G CK +
Sbjct: 380 EPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGK 439
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + K G P +VT N L+ G+C+ GR+ +A E G +A+TYT ++
Sbjct: 440 ELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAF 499
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ +E+ + M + G + D Y T+I+ F + GR+ +A+ + ++ G++ D
Sbjct: 500 CNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDT 559
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V YNTLI +C+ K + +L EME+ G + D T+ LI K G++K A+ +
Sbjct: 560 VCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRK 619
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV-----KDSFTYSSMVHNLCKAK 356
M K G + Y +++ +G + A+ +F+ M+ ++ Y+ ++++LCK
Sbjct: 620 MIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNN 679
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
++ SA L+ GV + A+ GLR
Sbjct: 680 KVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLR 711
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 190/412 (46%), Gaps = 13/412 (3%)
Query: 8 QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 67
+ +S D ++ + E G+ LI RN + DL EM+++G +
Sbjct: 247 ELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESA 306
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR-- 125
+ NSL+ L + G + N + + M+ D+ P TF I++N +CK R D+AL +
Sbjct: 307 ACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKM 366
Query: 126 -GLQKHGFV-----PELVTYNILIKGLCKAGRLRTARWILKEL-GDSGHAPNAITYTTIM 178
G ++ G + P++V YN LI GLCK GR + +++ + G AP+ ITY ++
Sbjct: 367 SGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLI 426
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ + + G E+ M ++G + T++ + GR+ A ++ + G++
Sbjct: 427 DGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMK 486
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D V+Y LIN +C E A L +EM K G D + LI G +AG + A
Sbjct: 487 GDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFV 546
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCK 354
L + K+G + YN ++ + K + + ME D+ TY++++ K
Sbjct: 547 LAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASK 606
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
L A K++ +K+GV + AV++ +G EA +I ++ A
Sbjct: 607 NGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAA 658
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 145/338 (42%), Gaps = 39/338 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ + G + + M + G++P+VVT N+L+ G R +S +++ E G
Sbjct: 425 LIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRG 484
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D +Y +L+ N C + A+
Sbjct: 485 MKGDAVTYTALI-----------------------------------NAFCNVNNFEKAM 509
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + K G P+ + Y LI G +AGR+ A ++L EL G P+ + Y T++
Sbjct: 510 ELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGF 569
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R K+ E+L M+ G D Y T+IA K G LK A M +M+ GV +
Sbjct: 570 CRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTV 629
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQG-FECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y +IN YC G A + +M+ + + ILI+ LCK +K A +E
Sbjct: 630 ATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLME 689
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
M G N YN I L + ++ VFE M+
Sbjct: 690 DMKIWGVTPNTTTYNAIFKGLRDEKDLEK---VFEFMD 724
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 173/364 (47%), Gaps = 4/364 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ Y + IL+ M + + +V TY LI +R+S + + L DEML+ G
Sbjct: 233 LLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKG 292
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV+ Y S+++ + G A +F +M L P T+ ++NG CK A
Sbjct: 293 IEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAE 352
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M +Q G V +N L+ G CK G + A + + G +A T I
Sbjct: 353 MMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGF 412
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ + + +L M+ +G + + +I + K EA + M G +
Sbjct: 413 CRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSV 472
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN I YCK+GK+E AY L++EM+++G D YT+T LIDG +GN+ A
Sbjct: 473 VTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNE 532
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M ++G + N+ Y I+ L KDG+ D A +++ M V D YSS++ +L K
Sbjct: 533 MPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGP 592
Query: 358 LPSA 361
L S
Sbjct: 593 LVSG 596
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 163/339 (48%), Gaps = 1/339 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLI+ Y + + + + M + GI PDV Y S+I + + + L DEM E
Sbjct: 267 MLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTER 326
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P+ ++Y +L++ + G+ A + DM + FN +++G CK D A
Sbjct: 327 RLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEA 386
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
LR+ +Q+ GF + T NI+ G C++ R A+ +L + + G APN ++++ ++
Sbjct: 387 LRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDI 446
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + + M++KG Y I + K G+++EA + +M G+ D
Sbjct: 447 YCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPD 506
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y +LI+ G ++ A L +EM + G + T+T++I GL K G A +
Sbjct: 507 TYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYD 566
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI-NVFESME 338
MNK G + Y+ ++ L K G + + NV + +E
Sbjct: 567 EMNKEGIVPDDGIYSSLIASLHKVGPLVSGLENVVDRIE 605
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 185/397 (46%), Gaps = 8/397 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
ML Y FD+ + + R+ G D + + R+ + ++ L +M++
Sbjct: 127 MLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDS 186
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI V S+ +++ L + G+ A + +++C P T+N +LNG + +
Sbjct: 187 GIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGV 246
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK- 179
+ ++K+ + TY +LI+ ++ ++ A + E+ G P+ YT+I+
Sbjct: 247 NEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINW 306
Query: 180 -CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
C F N K L M + + + Y +I K G +K A + M + GV
Sbjct: 307 NCKFGNMKRAFVL--FDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVD 364
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
++ V +NTL++ YCK+G ++ A L + M+++GFE D +T I+ G C++ + A+
Sbjct: 365 VNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRL 424
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
L M + G N+ +++ ++D K+ A +F+ ME K TY++ + CK
Sbjct: 425 LLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCK 484
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
++ A KL+ + G+ +++DG R SG
Sbjct: 485 KGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASG 521
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 146/347 (42%), Gaps = 59/347 (17%)
Query: 114 NRYTDNALRMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
N T + LR F L Q P+L + IL L +A + + +LK + + G+ + +
Sbjct: 45 NLPTRSCLRFFDFLRQNPSRKPDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNV 104
Query: 173 TY------------TTIMKCC---FR----NRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
+ + K C FR NR + LE+ ++KG+ D +
Sbjct: 105 ERIVSSIGGEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFL 164
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
A + G ++ +++ QMV G+++ + S+ +++ CK+G++ A L+DE+ +GF+
Sbjct: 165 LALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFK 224
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
T+ L++G + ++ G L M K D N+ Y +++ + KI+ A +
Sbjct: 225 PSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKL 284
Query: 334 FESME---------------------------------------VKDSFTYSSMVHNLCK 354
F+ M V +++TY ++++ CK
Sbjct: 285 FDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACK 344
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
A + +A ++ GV + + ++DG G EA ++Q+
Sbjct: 345 AGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQN 391
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 177/372 (47%), Gaps = 4/372 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P +++L + +L ++ +M + P S N L+H +LGK D+ R
Sbjct: 58 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
F+DMI P T+NIM++ +CK + A +F ++ G VP+ VTYN +I G K
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
GRL +E+ D P+ ITY ++ C + K +GLE MK G +
Sbjct: 178 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 237
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y T++ AF K G +++A + M G+ + +Y +LI+ CK G L A+ L +EM
Sbjct: 238 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 297
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
+ G E + T+T LIDGLC A +K A M+ G NL +YN ++ K +D
Sbjct: 298 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 357
Query: 329 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 384
A+ + ++ + D Y + + LC +++ +A ++ + G++ ++
Sbjct: 358 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 417
Query: 385 DGLRHSGCRREA 396
D SG E
Sbjct: 418 DAYFKSGNPTEG 429
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 202/413 (48%), Gaps = 7/413 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ +A + M+ G+ PD VTYNS+I G + L ++ +EM +M
Sbjct: 135 IMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDM 194
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV +YN+L++C + GK +++M L P +++ +++ CK A
Sbjct: 195 CCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQA 254
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + +++ G VP TY LI CK G L A + E+ G N +TYT ++
Sbjct: 255 IKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDG 314
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K E+ M G + Y +I FVK + A + + ++ G++ D
Sbjct: 315 LCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPD 374
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++ Y T I C K+EAA ++++EM++ G + + +T L+D K+GN L+
Sbjct: 375 LLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLD 434
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-----VKDSFTYSSMVHNLCKA 355
M ++ + + + ++D L K+ + A++ F + ++ +++M+ LCK
Sbjct: 435 EMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKD 494
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
++ +A+ L ++ G+ ++A +++DG G EA ++ K MA+I
Sbjct: 495 NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK--MAEI 545
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 167/337 (49%), Gaps = 1/337 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+DA+C+ MR G+ P+ TY SLI + LS + L +EML++G
Sbjct: 241 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 300
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ +V +Y +L+ L + EA +F M + P A++N +++G K + D AL
Sbjct: 301 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 360
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L+ G P+L+ Y I GLC ++ A+ ++ E+ + G N++ YTT+M
Sbjct: 361 ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 420
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLD 240
F++ GL +L MK +C +I K + +A DY ++ D G+Q +
Sbjct: 421 FKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQAN 480
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +I+ CK+ ++EAA L ++M ++G D+ +T L+DG K GN+ A +
Sbjct: 481 AAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRD 540
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M +IG +L AY +V L ++ A + E M
Sbjct: 541 KMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 577
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 160/372 (43%), Gaps = 54/372 (14%)
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD-------------------- 96
M G V SY + H LF +AN V ++M+
Sbjct: 1 MTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGF 60
Query: 97 ------------------------------LTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
+ P T + N +L+ K TD+ R F+
Sbjct: 61 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 120
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
+ G P + TYNI+I +CK G + AR + +E+ G P+ +TY +++ + +
Sbjct: 121 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 180
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
+ MK D Y +I F K G+L ++ +M +G++ ++VSY+T
Sbjct: 181 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 240
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
L++ +CKEG ++ A +M + G ++YT+T LID CK GN+ A M ++G
Sbjct: 241 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 300
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSAS 362
+ N+ Y ++D L ++ A +F M+ + + +Y++++H KAK + A
Sbjct: 301 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 360
Query: 363 KLLLSCLKSGVR 374
+LL G++
Sbjct: 361 ELLNELKGRGIK 372
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 112/242 (46%), Gaps = 1/242 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + + + D +LN ++ GI PD++ Y + I G + + +++EM E G
Sbjct: 346 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 405
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I + Y +LM F+ G P E + +M D+ TF ++++GLCKN+ A+
Sbjct: 406 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 465
Query: 122 RMF-RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
F R G + +I GLCK ++ A + +++ G P+ YT++M
Sbjct: 466 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 525
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+ L + M G D Y +++ +L++A ++E+M+ +G+ D
Sbjct: 526 NFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 585
Query: 241 IV 242
V
Sbjct: 586 EV 587
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 185/367 (50%), Gaps = 8/367 (2%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEAN 86
SP+ VTYN++IAG + ++++ EM E G I PD ++Y +++ ++GK ++A
Sbjct: 144 SPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDAT 203
Query: 87 RVFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRG-LQKHGFVPELVTYNILIK 144
+VF +M+ G + P +N ++ G C + ALR +RG + G + TYN+ +
Sbjct: 204 KVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALR-YRGEMVDRGVSMTVATYNLFVH 262
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
L GR A +++E+G+ G AP+A TY ++ + K K +++ M KG
Sbjct: 263 TLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRA 322
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
Y ++I A G ++E V G++ D+ YN LIN +C G ++ A+ ++
Sbjct: 323 TVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIM 382
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
EMEK+ D T+ L+ GLC G + AR +E M K G +L +YN ++
Sbjct: 383 GEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMK 442
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
G I A+ V + M K TY++M+ LC + A L+ + +G+ S
Sbjct: 443 GDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTY 502
Query: 381 KAVVDGL 387
++++GL
Sbjct: 503 ISLIEGL 509
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 151/321 (47%), Gaps = 1/321 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+I +C+ + + + M E + P+ V YN+LI G L +L EM++
Sbjct: 189 VISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDR 248
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ V +YN +H LF G+ EA+ + ++M L P T+NI++NG CK A
Sbjct: 249 GVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKA 308
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++MF + G +VTY LI L G ++ + + G P+ Y ++
Sbjct: 309 MKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINS 368
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
EI+ M++K T D Y T++ +GRL EA +E+M G+Q D
Sbjct: 369 HCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPD 428
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+VSYNTLI+ Y +G ++ A + DEM +GF T+ +I GLC G A ++
Sbjct: 429 LVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVK 488
Query: 301 YMNKIGFDSNLEAYNCIVDRL 321
M G + Y +++ L
Sbjct: 489 EMVGNGITPDDSTYISLIEGL 509
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 170/397 (42%), Gaps = 49/397 (12%)
Query: 48 SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 107
+ SL L + + +P S + L+ L P A +F D+ L T TFNIM
Sbjct: 67 TTSLSLYSRLKSLSLPIPTASLHPLLSSL----PPAPAFVLFADIFRLRLPLSTTTFNIM 122
Query: 108 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 167
L LC AL + R + P VTYN +I G C GR++ I++E+ + G
Sbjct: 123 LRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFCARGRVQAGIEIMREMRERGG 178
Query: 168 -APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-YTFDGFGYCTVIAAFVKIGRLKEA 225
AP+ TY T++ + K + ++ M +G + Y +I + G L+ A
Sbjct: 179 IAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVA 238
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
Y +MV GV + + +YN ++ EG+ A+ L++EM ++G D +T+ ILI+G
Sbjct: 239 LRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILING 298
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV------------DRLGKD--------- 324
CK G K A E M G + + Y ++ DRL D
Sbjct: 299 YCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPD 358
Query: 325 --------------GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
G +D A + ME K D TY++++ LC RL A L+
Sbjct: 359 LFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIE 418
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
K G++ + ++ G G ++A K++ ++
Sbjct: 419 EMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEM 455
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 163/340 (47%), Gaps = 20/340 (5%)
Query: 46 LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL---GKPDEAN-RVFQDMICGDLTPCT 101
L +L + + + P + + SL H L G+P + ++ + L T
Sbjct: 26 LFKSALSADPALSPLAVLPHLAATPSLPHLLLTASVAGRPHTTSLSLYSRLKSLSLPIPT 85
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
A+ + +L+ L A +F + + T+NI+++ LC AG+ A +L++
Sbjct: 86 ASLHPLLSSLPPA----PAFVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQ 141
Query: 162 LGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMK-RKGYTFDGFGYCTVIAAFVKI 219
+ +PNA+TY T++ C R R + G+EI+ M+ R G D + Y TVI+ + K+
Sbjct: 142 M----PSPNAVTYNTVIAGFCARGR-VQAGIEIMREMRERGGIAPDKYTYATVISGWCKV 196
Query: 220 GRLKEATDYMEQMVTDG-VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
G++++AT ++M+T+G V+ + V YN LI YC +G LE A EM +G T
Sbjct: 197 GKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVAT 256
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+ + + L G A +E M + G + YN +++ K+GK A+ +FE M
Sbjct: 257 YNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMV 316
Query: 339 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
K TY+S++H L + +L ++ G+R
Sbjct: 317 GKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIR 356
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 120/245 (48%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
+ ++ M E G++PD TYN LI G + ++ + + M+ GI V +Y SL+H
Sbjct: 274 HALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHA 333
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
L G E +R+F D + + P +N ++N C D A + ++K P+
Sbjct: 334 LSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPD 393
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
VTYN L++GLC GRL AR +++E+ G P+ ++Y T++ K +++
Sbjct: 394 DVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRD 453
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M KG+ Y +I G+ +A D +++MV +G+ D +Y +LI E
Sbjct: 454 EMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTED 513
Query: 256 KLEAA 260
+ AA
Sbjct: 514 ERLAA 518
>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 189/406 (46%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+IDA + S D Y +M PD TYN LI G R+ ++ +L L+ +M +G
Sbjct: 223 VIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLG 282
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V++Y L+ F K DEA RV + M ++P AT ++G+ + + A
Sbjct: 283 YSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHGVFRCVAPNKAF 342
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + V + + + L+ L R A +LK+ G GH P++ T+ M C
Sbjct: 343 ELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCL 402
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ IL +G F Y +I A G++ E Y QMV DG+ ++
Sbjct: 403 IKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNV 462
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
SYN +I+ +CK ++ A EM+ +G + T LIDG CK G I +R L
Sbjct: 463 CSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVM 522
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
+ + GF ++ ++ I+D L + +I+ A+ F M + ++ TY+ ++H+LC
Sbjct: 523 LLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGD 582
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+P + KLL G+ + A++ G +AKK+ S +
Sbjct: 583 VPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSM 628
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 150/318 (47%), Gaps = 1/318 (0%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
+AG +L + + G PD T+N + + L+ ++LD +E G+ +Y +L
Sbjct: 375 EAG-ALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLAL 433
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ L+ GK E N F M+ L ++N++++ CK D A F+ +Q G
Sbjct: 434 IKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGI 493
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P LVT+N LI G CK G + +R +L L + G P+ T+++I+ R ++ + L
Sbjct: 494 PPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALG 553
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
S M G + + Y +I + IG + + + +M TDG+ D+ S+N LI +C
Sbjct: 554 CFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFC 613
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
+ GK+E A L M G D YT+ I C++G A+ M G +
Sbjct: 614 RMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSF 673
Query: 313 AYNCIVDRLGKDGKIDHA 330
N I+D L K + + A
Sbjct: 674 TCNIILDALVKQDQFEAA 691
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 118/225 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M+ID +C+ D M+ GI P++VT+N+LI G + + S DLL +LE
Sbjct: 467 MVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEH 526
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+++++S++ L + + ++A F +M+ L+P T+NI+++ LC +
Sbjct: 527 GFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRS 586
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ R +Q G P++ ++N LI+ C+ G++ A+ + + G P+ TY +K
Sbjct: 587 MKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKV 646
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
++ ++ E+ +M+ G D F ++ A VK + + A
Sbjct: 647 FCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAA 691
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 93/192 (48%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ +L + E G PD+ T++S+I G R + +L EM+ G
Sbjct: 503 LIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWG 562
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +YN L+H L +G + ++ + M + P +FN ++ C+ ++A
Sbjct: 563 LSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAK 622
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + G +P+ TY IK C++GR A+ + + +G P++ T I+
Sbjct: 623 KLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDAL 682
Query: 182 FRNRKYKLGLEI 193
+ +++ +I
Sbjct: 683 VKQDQFEAAQKI 694
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 106/239 (44%), Gaps = 6/239 (2%)
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
+ C +R L +E+L +K GY + C +I ++ ++G K + Q+
Sbjct: 152 VLANCLYRKGPVVLSVELLKDIKASGYRINEELLCILIGSWGRLGLAKYCDEIFGQISFL 211
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G+ YN +I+ K L+ AYL +M + D++T+ ILI G+C++G + A
Sbjct: 212 GISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEA 271
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 351
++ M +G+ N+ Y ++D K+D A V E+M+ + T S +H
Sbjct: 272 LRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHG 331
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
+ + A +L + ++ + + A ++ L REA + K KI H
Sbjct: 332 VFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKK--FGKIGH 388
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + C +L +M+ GI+PDV ++N+LI R + + L ML +
Sbjct: 572 ILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSL 631
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD ++Y + + Q G+ +EA +F M P + T NI+L+ L K + A
Sbjct: 632 GLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAA 691
Query: 121 LRMFRGLQKHGFV 133
++ + + G +
Sbjct: 692 QKIAKTCSEWGIL 704
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 6/160 (3%)
Query: 150 GRLRTARW---ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
GRL A++ I ++ G +P+ Y ++ ++ L M D
Sbjct: 193 GRLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDR 252
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
F Y +I + G + EA ++QM G ++ +Y LI+ + K++ A+ +L+
Sbjct: 253 FTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLET 312
Query: 267 MEKQGFECDKYTHTILIDGL--CKAGNIKGARLHLEYMNK 304
M+ + + T I G+ C A N K L +E++ +
Sbjct: 313 MKARKVSPSEATIRSFIHGVFRCVAPN-KAFELAIEFIER 351
>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
Length = 645
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 174/356 (48%), Gaps = 4/356 (1%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
+ + + M G+ P VVTYN+LI ++ + ++ D+M+ I P+V +Y +++
Sbjct: 170 AWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMIC 229
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
L + G +A R+F M + P T+N++++G C+ ++A+ +++ L K G P
Sbjct: 230 ALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNP 289
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
V + LI G CKA R A+ + E+ G AP Y ++M FR+ + L +
Sbjct: 290 NAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALY 349
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
M R G D F V+ G++ A +++ + DGV L+ +YN LI+ YC+
Sbjct: 350 QEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRI 409
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
G LE A M + G E + +++ LIDG K G ++ A M G + N+ Y
Sbjct: 410 GNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTY 469
Query: 315 NCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLL 366
++ K+G ID A + + M ++ T S +V LC+ R+ A + ++
Sbjct: 470 TALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVM 525
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 189/394 (47%), Gaps = 21/394 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I A C+ + + M+EAG+ P+ TYN L++G + ++ ++ L E+L+ G
Sbjct: 227 MICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSG 286
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ + +L+ + + EA +F +M + P +N +++G ++ AL
Sbjct: 287 LNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEAL 346
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + + G P+ T +I+++GLC G++ A L+ + + G NA Y ++
Sbjct: 347 ALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEY 406
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + L + M G + Y ++I K G+++ A +MV G++ ++
Sbjct: 407 CRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNV 466
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLE 300
V+Y LI+ + K G ++AA+ L EM + G + T ++L+DGLC+ ++ A R +E
Sbjct: 467 VTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVME 526
Query: 301 Y-------MNKIGFDSNLEA---------YNCIVDRLGKDGKIDHAINVFESME----VK 340
Y ++ + + +E Y ++ L DG+ A +F M +
Sbjct: 527 YSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIP 586
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
DSFTY+ ++ C + +A L +K GV+
Sbjct: 587 DSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVK 620
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 52/221 (23%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ + + RM E GI P+VV+Y+SLI G ++ + ++ + EM+ G
Sbjct: 402 LIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKG 461
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V +Y +L+H + G D A R+ ++MI ++P T +++++GLC+ A+
Sbjct: 462 IEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAV 521
Query: 122 R----------------------------------------------------MFRGLQK 129
R +F ++K
Sbjct: 522 RFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRK 581
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
G +P+ TY +LI+G C G + A + ++ G P
Sbjct: 582 SGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPT 622
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 201/413 (48%), Gaps = 7/413 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID + +A + M+ G+ PD VTYNS+I G + L ++ +EM M
Sbjct: 138 IMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSM 197
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV +YNSL++C + GK + +++M L P +++ +++ CK A
Sbjct: 198 SCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQA 257
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + +++ G VP TY L+ CK G L A + E+ + G N +TYT ++
Sbjct: 258 IKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDG 317
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K ++ M G + Y +I FVK + A + + ++ G+Q D
Sbjct: 318 LCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPD 377
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++ Y T I C K+EAA ++++EM++ G + + +T L+D K+GN LE
Sbjct: 378 LLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLE 437
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-----VKDSFTYSSMVHNLCKA 355
M ++ + + + ++D L K+ + AI+ F M ++ Y++M+ LCK
Sbjct: 438 EMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKE 497
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
++ +A+ L + G+ ++A +++DG G EA ++ K MA+I
Sbjct: 498 NQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDK--MAEI 548
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 169/337 (50%), Gaps = 1/337 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+DA+C+ MR G P+ TY SL+ + LS + L +EMLE+G
Sbjct: 244 LVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVG 303
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ +V +Y +L+ L + EA ++F M+ + P A++N +++G K + D AL
Sbjct: 304 VEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRAL 363
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L+ G P+L+ Y I GLC ++ A+ ++ E+ ++G N + YTT+M
Sbjct: 364 ELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAY 423
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLD 240
F++ GL +L M+ + +C +I K + +A DY +M D G+Q +
Sbjct: 424 FKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPN 483
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
Y +I+ CKE +++AA L ++M ++G D+ +T L+DG K GN+ A +
Sbjct: 484 AAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRD 543
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M +IG +L AY +V + ++ A + E M
Sbjct: 544 KMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEM 580
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 174/372 (46%), Gaps = 4/372 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P +++L + +L + +M + P S N L+H +LGK D R
Sbjct: 61 PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
F+DMI P T+NIM++ + K + A +F ++ G +P+ VTYN +I G K
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGK 180
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
GRL + +E+ P+ ITY +++ C ++ K GLE MK+ G +
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVS 240
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y T++ AF K +++A + M G + +Y +L++ CK G L A+ L +EM
Sbjct: 241 YSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEML 300
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
+ G E + T+T LIDGLC A +K A M G NL +YN ++ K +D
Sbjct: 301 EVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMD 360
Query: 329 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 384
A+ + ++ + D Y + + LC +++ +A ++ ++G++ ++
Sbjct: 361 RALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLM 420
Query: 385 DGLRHSGCRREA 396
D SG E
Sbjct: 421 DAYFKSGNPTEG 432
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 114/242 (47%), Gaps = 1/242 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + + + D +LN ++ GI PD++ Y + I G + + +++EM E G
Sbjct: 349 LIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENG 408
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I + Y +LM F+ G P E + ++M D TF ++++GLCKN+ A+
Sbjct: 409 IKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAI 468
Query: 122 RMF-RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
F R G P Y +I GLCK +++ A + +++ G P+ YT++M
Sbjct: 469 DYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDG 528
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ L + M G D Y +++ F + +L++A ++E+M+ + + D
Sbjct: 529 NLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPD 588
Query: 241 IV 242
V
Sbjct: 589 EV 590
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 134/315 (42%), Gaps = 41/315 (13%)
Query: 99 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 158
P F+ + + L + A + F +++ P+ + N L+ K G+ +
Sbjct: 61 PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120
Query: 159 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 218
K++ +G P TY ++ C ++
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKE---------------------------------- 146
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
G ++ A E+M G+ D V+YN++I+ Y K G+L+ +EM+ E D T
Sbjct: 147 -GDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVIT 205
Query: 279 HTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
+ LI+ CK+G + KG + E M + G N+ +Y+ +VD K+ + AI + M
Sbjct: 206 YNSLINCFCKSGKLPKGLEFYRE-MKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDM 264
Query: 338 ----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 393
V + FTY+S+V CK L A +L L+ GV A++DGL +
Sbjct: 265 RRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERM 324
Query: 394 REAKKIQSKIRMAKI 408
+EA+K+ K+ A +
Sbjct: 325 KEAEKLFGKMVTAGV 339
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 192/407 (47%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ YC+F D + ++ M+ G+ P+ Y S+I R L+ + + EM+ G
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD Y +L+ + G A++ F +M D+TP T+ +++G C+ A
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + G P+ VT+ LI G CKAG ++ A + + +G +PN +TYTT++
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ E+L M + G + F Y +++ K G ++EA + + G+ D
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y TL++ YCK G+++ A +L EM +G + T +L++G C G ++ L +
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G N +N +V + + A +++ M + D TY ++V CKA+
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A L G + S ++ G EA+++ ++R
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 181/388 (46%), Gaps = 8/388 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C+ + M GI PD V Y +LI G + + + EM
Sbjct: 322 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 381
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV +Y +++ Q+G EA ++F +M C L P + TF ++NG CK + +A
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + + G P +VTY LI GLCK G L +A +L E+ G PN TY +I+
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + ++++ + G D Y T++ A+ K G + +A + +++M+ G+Q I
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++N L+N +C G LE LL+ M +G + T L+ C N+K A +
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G + + Y +V K + A +F+ M+ K TYS ++ K K+
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVD 385
A ++ + G+ +A K + D
Sbjct: 682 FLEAREVFDQMRREGL----AADKEIFD 705
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 174/356 (48%), Gaps = 4/356 (1%)
Query: 48 SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 107
+ ++ + E E+G+ +V SYN ++H + QLG+ EA+ + M TP +++ +
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 108 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 167
+NG C+ D ++ +++ G P Y +I LC+ +L A E+ G
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 168 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
P+ + YTT++ + + + M + T D Y +I+ F +IG + EA
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 407
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
+M G++ D V++ LIN YCK G ++ A+ + + M + G + T+T LIDGLC
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSF 343
K G++ A L M KIG N+ YN IV+ L K G I+ A+ + E D+
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
TY++++ CK+ + A ++L L G++ +++G G + +K+
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 178/377 (47%), Gaps = 4/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I CQ + +L M G +PDV++Y++++ G R L L++ M
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ + Y S++ L ++ K EA F +MI + P T + +++G CK A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ F + P+++TY +I G C+ G + A + E+ G P+++T+T ++
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + + M + G + + Y T+I K G L A + + +M G+Q +
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I +YN+++N CK G +E A L+ E E G D T+T L+D CK+G + A+ L+
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G + +N +++ G ++ + M K ++ T++S+V C
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 610
Query: 357 RLPSASKLLLSCLKSGV 373
L +A+ + GV
Sbjct: 611 NLKAATAIYKDMCSRGV 627
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 157/337 (46%), Gaps = 37/337 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC+ + + N M +AG SP+VVTY +LI G + L + +LL EM ++G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++++YNS+++ L + G +EA ++ + L T T+ +++ CK+ D A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-C 180
+ + + G P +VT+N+L+ G C G L +L + G APNA T+ +++K
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C RN LK AT + M + GV D
Sbjct: 607 CIRNN------------------------------------LKAATAIYKDMCSRGVGPD 630
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y L+ +CK ++ A+ L EM+ +GF T+++LI G K AR +
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M + G ++ E ++ D K + D ++ + +
Sbjct: 691 QMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 727
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 177/382 (46%), Gaps = 44/382 (11%)
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY-T 117
+ G P V ++ L G EA RVF+ M+ L + N+ L L K+ Y T
Sbjct: 170 DWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 227
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
A+ +FR + G + +YNI+I +C+ GR++ A +L + G+ P+ I+Y+T+
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ R + +++ MKRKG + + Y ++I +I +L EA + +M+ G+
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK---------------------------- 269
D V Y TLI+ +CK G + AA EM
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 407
Query: 270 -------QGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRL 321
+G E D T T LI+G CKAG++K A R+H +M + G N+ Y ++D L
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH-NHMIQAGCSPNVVTYTTLIDGL 466
Query: 322 GKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
K+G +D A + M + FTY+S+V+ LCK+ + A KL+ +G+
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 378 SAQKAVVDGLRHSGCRREAKKI 399
++D SG +A++I
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEI 548
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 75/188 (39%), Gaps = 40/188 (21%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ +C + G +LN M GI+P+ T+NSL+ + L + + +M
Sbjct: 566 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 625
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD +Y +L + G CK R A
Sbjct: 626 GVGPDGKTYENL-----------------------------------VKGHCKARNMKEA 650
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ ++ GF + TY++LIKG K + AR + ++ G A + +
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDF---- 706
Query: 181 CFRNRKYK 188
F + KYK
Sbjct: 707 -FSDTKYK 713
>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 177/336 (52%), Gaps = 3/336 (0%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
+M GI+P +V+YN+LI G + + + +L +LE G+ P+ +Y L+ F+ G
Sbjct: 454 KMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKG 513
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
+ A VF+ M+ ++ P TFN ++NGL K K GFV +TYN
Sbjct: 514 DSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYN 573
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
+I G K G + +A +E+ +SG +P+ ITYT+++ ++ K L LE+ S MK K
Sbjct: 574 SIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYK 633
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G D Y +I F K+ ++ A+ + +++ G+ + V YN++I+ + +EAA
Sbjct: 634 GMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAA 693
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVD 319
L EM K CD +T +I GL K G + A L+ E ++K ++ Y +++
Sbjct: 694 LNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSK-DIVPDIVMYTVLIN 752
Query: 320 RLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA 355
L +G++++A + + M+ ++ T S +V+N+ A
Sbjct: 753 GLSNNGQLENASKILKEMD-GNNITPSVLVYNILIA 787
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 192/404 (47%), Gaps = 7/404 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ + + Y + RM+ GI P+V NSL+ G +LL + L DE +E
Sbjct: 365 VLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEH 424
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI +V +YN L+ L +LGK +EA +++ M+ +TP ++N ++ G CK D A
Sbjct: 425 GIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKA 483
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
M + + + G P VTY +LI G K G A + +++ + AP T+ T++
Sbjct: 484 YSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVING 543
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + L+ ++G+ Y ++I F K G + A +M G+ D
Sbjct: 544 LGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPD 603
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++Y +LI+ CK K+ A + +M+ +G + D ++ LIDG CK +++ A
Sbjct: 604 VITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFT 663
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMVHNLCKA 355
+ IG N YN ++ ++ A+N+ + M +K+ Y+S++ L K
Sbjct: 664 ELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEM-IKNKVPCDLQVYTSIIGGLLKE 722
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+L A L L + +++GL ++G A KI
Sbjct: 723 GKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKI 766
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 183/391 (46%), Gaps = 5/391 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ A C+ + + +L MRE G P TY ++I + +L L DEM+ +
Sbjct: 260 ILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSV 319
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+P +V SLM LG + A ++F +++ G + P F++++NG K + A
Sbjct: 320 GLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKA 379
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ ++ G P + N L++G + L A + E + G N +TY ++K
Sbjct: 380 YELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHG-ITNVVTYNILLKW 438
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K + M KG T Y +I K G + +A ++ ++ G++ +
Sbjct: 439 LGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPN 498
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+Y LI+ + K+G E A+++ ++M +T +I+GL K G + + L
Sbjct: 499 AVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLN 558
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAK 356
K GF S YN I+D K+G +D A+ + ES D TY+S++ LCK+
Sbjct: 559 NFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSN 618
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
++ A ++ G+++ A A++DG
Sbjct: 619 KIGLALEMHSDMKYKGMKLDVVAYSALIDGF 649
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 168/392 (42%), Gaps = 40/392 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ YC + + + + E G+ PDVV ++ LI G ++ + + +L M MG
Sbjct: 331 LMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMG 390
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V+ NSL+ + + A +F + + +T T+NI+L L + + A
Sbjct: 391 IQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITN-VVTYNILLKWLGELGKVNEAC 449
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + G P LV+YN LI G CK G + A +LK + + G PNA+TYT +
Sbjct: 450 NLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLL---- 505
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
I F K G + A EQM+ +
Sbjct: 506 -------------------------------IDGFFKKGDSERAFVVFEQMMAANIAPTD 534
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++NT+IN K G++ L+ KQGF T+ +IDG K G + A L
Sbjct: 535 HTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYRE 594
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M + G ++ Y ++D L K KI A+ + M+ K D YS+++ CK
Sbjct: 595 MCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHD 654
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
+ SASK L G+ +++ G H
Sbjct: 655 MESASKFFTELLDIGLTPNTVVYNSMISGFIH 686
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 154/320 (48%), Gaps = 2/320 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID + + + + + +M A I+P T+N++I G + +S + D L+ ++
Sbjct: 504 LLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQ 563
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G +YNS++ F+ G D A +++M ++P T+ +++GLCK+ A
Sbjct: 564 GFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLA 623
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L M ++ G ++V Y+ LI G CK + +A EL D G PN + Y +++
Sbjct: 624 LEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISG 683
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ L + M + D Y ++I +K G+L A D +M++ + D
Sbjct: 684 FIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPD 743
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
IV Y LIN G+LE A +L EM+ + ILI G + GN++ A RLH
Sbjct: 744 IVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHD 803
Query: 300 EYMNKIGFDSNLEAYNCIVD 319
E ++K G + Y+ +V+
Sbjct: 804 EMLDK-GLVPDDTTYDILVN 822
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 163/387 (42%), Gaps = 38/387 (9%)
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D +N L+ ++ K +A F+ M+ DL P N +L + + +A
Sbjct: 145 GFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDA 204
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + + G + T +++++ K G+ KE G +A Y+ +++
Sbjct: 205 RQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQA 264
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R L E+L M+ G+ Y VI A VK G EA ++MV+ G+ ++
Sbjct: 265 VCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMN 324
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++ +L+ YC G + A L DE+ + G D ++LI+G K G+++ A
Sbjct: 325 VIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYT 384
Query: 301 YMNKIG---------------------------FD-------SNLEAYNCIVDRLGKDGK 326
M +G FD +N+ YN ++ LG+ GK
Sbjct: 385 RMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELGK 444
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
++ A N++E M K +Y++++ CK + A +L S L+ G++
Sbjct: 445 VNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTL 504
Query: 383 VVDGLRHSGCRREAKKIQSKIRMAKIS 409
++DG G A + ++ A I+
Sbjct: 505 LIDGFFKKGDSERAFVVFEQMMAANIA 531
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 132/262 (50%), Gaps = 5/262 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID + + + D+ M E+GISPDV+TY SLI G +++ + +L++ +M G
Sbjct: 575 IIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKG 634
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ DV +Y++L+ ++ + A++ F +++ LTP T +N M++G + AL
Sbjct: 635 MKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAAL 694
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + K+ +L Y +I GL K G+L A + E+ P+ + YT ++
Sbjct: 695 NLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGL 754
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N + + +IL M T Y +IA + G L+EA ++M+ G+ D
Sbjct: 755 SNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDD 814
Query: 242 VSYNTLINLYCKEGKLEAAYLL 263
+Y+ L+N GKL+ ++ L
Sbjct: 815 TTYDILVN-----GKLKVSHTL 831
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 176/367 (47%), Gaps = 4/367 (1%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
+ D + N M E GI P VVTYN+++ + ++ +L LL +M MG P+ +YN
Sbjct: 182 NIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYN 241
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
L++ L G+ ++A + QDM+ L T++ ++ G C+ + A R+ +
Sbjct: 242 VLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSR 301
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G VP +VTYN ++ GLCK GR+ AR +L + + P+ ++Y T++ R
Sbjct: 302 GAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEA 361
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+ + ++ + Y T+I ++G L A ++M+ G D+ ++ T +
Sbjct: 362 FLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRG 421
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+CK G L A L DEM +G + D++ + I G K G+ A E M GF +
Sbjct: 422 FCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPD 481
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLL 366
L YN +D L K G + A + + M V D TY+S++H A L A L L
Sbjct: 482 LITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFL 541
Query: 367 SCLKSGV 373
L G+
Sbjct: 542 EMLSKGI 548
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 189/390 (48%), Gaps = 4/390 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D++C+ +L +M+ G SP+ VTYN L+ G + + + + +L+ +ML +G
Sbjct: 208 MLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLG 267
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ V++Y+ L+ + G+ +EA+R+ ++M+ P T+N ++ GLCK +A
Sbjct: 268 LEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDAR 327
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + +P+LV+YN LI G + G + A + EL AP+ +TY T++
Sbjct: 328 KLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGL 387
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + + + M + G D F + T + F K+G L A + ++M+ G+Q D
Sbjct: 388 CRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDR 447
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y T I K G A+ + +EM +GF D T+ + IDGL K GN+K A ++
Sbjct: 448 FAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKK 507
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKR 357
M G + Y I+ G + A +F M K F TY+ ++H+ R
Sbjct: 508 MLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGR 567
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
L A + GV A+++GL
Sbjct: 568 LKLAILHFFEMHEKGVHPNVITYNALINGL 597
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 168/368 (45%), Gaps = 41/368 (11%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
C++ +L+ M + PD+V+YN+LI G TR + + L E+ + P V
Sbjct: 318 CKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSV 377
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF-- 124
+YN+L+ L +LG D A R+ +MI P TF + G CK A +F
Sbjct: 378 VTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDE 437
Query: 125 ---RGLQK------------------------------HGFVPELVTYNILIKGLCKAGR 151
RGLQ GF P+L+TYN+ I GL K G
Sbjct: 438 MLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGN 497
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
L+ A ++K++ +G P+ +TYT+I+ + + M KG Y
Sbjct: 498 LKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTV 557
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+I ++ GRLK A + +M GV ++++YN LIN CK K++ AY EM+ +G
Sbjct: 558 LIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKG 617
Query: 272 FECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
+KYT+TILI+ C G+ + A RL+ K D ++ +C L K D+
Sbjct: 618 ISPNKYTYTILINENCNLGHWQEALRLY-----KDMLDREIQPDSCTHRSLLKHLNKDYK 672
Query: 331 INVFESME 338
++V +E
Sbjct: 673 LHVVRHLE 680
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 88/189 (46%), Gaps = 2/189 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ ID + + ++ +M G+ PD VTY S+I L + L EML
Sbjct: 487 VFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSK 546
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P V +Y L+H G+ A F +M + P T+N ++NGLCK R D A
Sbjct: 547 GIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQA 606
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
F +Q G P TY ILI C G + A + K++ D P++ T+ +++K
Sbjct: 607 YNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKH 666
Query: 181 CFRNRKYKL 189
N+ YKL
Sbjct: 667 L--NKDYKL 673
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 190/411 (46%), Gaps = 37/411 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI YC + +++ M G SPD V+Y +++ +N + +D++++M +
Sbjct: 194 LIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTK 253
Query: 62 IPPDVWSYNSLMHCL--------------------FQL---------------GKPDEAN 86
+ D +YN+L+H L FQ+ G+ D+A
Sbjct: 254 LLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAK 313
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ +M P T+ ++NG + A +M + + KHG P V+Y +KGL
Sbjct: 314 EIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGL 373
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C+ G AR ++K + PNAITY+ +M R K +++ M KG+
Sbjct: 374 CQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTP 433
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
++ + +IGR+ EA +ME+ + G ++ V++ T+I+ +C++ +EAA LLD+
Sbjct: 434 VEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDD 493
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M D T+T +ID L K G I+ A M K G D Y ++ R G+ G+
Sbjct: 494 MYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGR 553
Query: 327 IDHAINVFESMEVKDS--FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
++ +N+ + M + ++ ++ LC L +A KLL L++ RI
Sbjct: 554 VEDLLNLLDKMLTRQECRTAFNQVIEKLCTFGNLEAADKLLGKVLRTASRI 604
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 171/351 (48%), Gaps = 4/351 (1%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
GI + ++ +R L ++ +L M + GI P++ N+ +H L ++A
Sbjct: 113 GIQRTPQDFCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKA 172
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
R + M + P T+N ++ G C ++A+ + + G P+ V+Y ++
Sbjct: 173 LRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGF 232
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCK R+R +++++ D+ + +TY T++ +++ L+ L +++G+ D
Sbjct: 233 LCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVD 292
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
GY ++ ++ K GR+ +A + + +M T G D+V+Y +IN + + G++ A +L
Sbjct: 293 KVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQ 352
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+M K G + + ++T + GLC+ GN AR ++ + + N Y+ ++ ++G
Sbjct: 353 QMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREG 412
Query: 326 KIDHAINVFESMEVKDSFTYSS----MVHNLCKAKRLPSASKLLLSCLKSG 372
K+ A +V M K F ++ +LC+ R+ A K + CL G
Sbjct: 413 KLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMG 463
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 118/302 (39%), Gaps = 41/302 (13%)
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
L++ +C+ R+A W K G H + + ++ L+ R+
Sbjct: 19 LVREICRLIECRSA-WNHKLEGKMRHLLRGLKPRLVCAVLLSQSDERVALDFFFWSDRQW 77
Query: 202 -YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
Y D YC ++ K + A + MV G+Q + ++ Y + GKL A
Sbjct: 78 RYRHDPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNA 137
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV-- 318
+L M+K G E + I L A ++ A LE M +G N+ YNC++
Sbjct: 138 MQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKG 197
Query: 319 ------------------------DR---------LGKDGKIDHAINVFESME----VKD 341
D+ L K+ +I ++V E ME + D
Sbjct: 198 YCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLAD 257
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
TY++++H LCK + A + L K G ++ K A+VD G +AK+I +
Sbjct: 258 QVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVN 317
Query: 402 KI 403
++
Sbjct: 318 EM 319
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 80/184 (43%), Gaps = 4/184 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ + C+ D + G + + V + ++I + + +L LLD+M
Sbjct: 438 LLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLS 497
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PD +Y +++ L + G+ +EA + M+ + P T+ +++ + ++
Sbjct: 498 NKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDL 557
Query: 121 LRMFRGLQKHGFVPELVT-YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
L + L K E T +N +I+ LC G L A +L ++ + +A T +M+
Sbjct: 558 LNL---LDKMLTRQECRTAFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVLME 614
Query: 180 CCFR 183
R
Sbjct: 615 SYLR 618
>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
Length = 948
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 181/363 (49%), Gaps = 4/363 (1%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
C+ + A +++RM GI DV TYN LI +N+ + LL +M + I P+
Sbjct: 21 CKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLLLKKMRKRMIAPNE 80
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
++YN+L++ L + K A RVF +M+ +L+P T+NI+++G C + ALR+
Sbjct: 81 FTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNFEQALRLLDV 140
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
++ G P+ V Y L+ GL K + A+ +++ + SG YT ++ ++
Sbjct: 141 MEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGL 200
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
L++L M + G + D + +I F K G++K A + + +M G+ + V Y T
Sbjct: 201 LDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYAT 260
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
LI CK+G + A+ M + G + D + +LI LC+AG + A + +M+ I
Sbjct: 261 LIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTID 320
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSAS 362
N ++CI++ G G A ++F+ M FTY S++ LCK L A
Sbjct: 321 LAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAK 380
Query: 363 KLL 365
KLL
Sbjct: 381 KLL 383
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 199/451 (44%), Gaps = 44/451 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLID C+ GY +L +MR+ I+P+ TYN+LI G + + + + +EML +
Sbjct: 50 MLIDDLCKNNRSAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLML 109
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
+ P+ +YN L+ HC G ++A R+ M L P + +L+GL K D
Sbjct: 110 NLSPNRVTYNILIDGHC--DCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFD 167
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGL-------------------------------- 146
A + ++ G V Y +I GL
Sbjct: 168 IAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLI 227
Query: 147 ---CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
CKAG+++ A+ ++ ++ +G APN + Y T++ + + M R G+
Sbjct: 228 NGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHD 287
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D F +I++ + GR+ EA D+M M T + + ++++ +IN Y G A+ +
Sbjct: 288 VDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSM 347
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
DEM K G +T+ L+ GLCK GN++ A+ L ++ I + YN I+ K
Sbjct: 348 FDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCK 407
Query: 324 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG-VRILKS 378
GK+ A+ +F M + DS TY+ ++ L + ++ A L G + K
Sbjct: 408 RGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKV 467
Query: 379 AQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
++ DGL G A I ++ I+
Sbjct: 468 MYTSLFDGLFKVGQSNAASYIYEEMEHKGIN 498
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 180/395 (45%), Gaps = 5/395 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ C+ + M + + PD TY ++AG +R + +L ++ L G
Sbjct: 401 ILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARG 460
Query: 62 -IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P+ Y SL LF++G+ + A+ ++++M + P T N +L+G + +
Sbjct: 461 TLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKV 520
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F +Q P L TYNIL+ G K L + G +P+ +T +I+
Sbjct: 521 EKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILG 580
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ +G ++L M + D +I + ++ +A D + G+ D
Sbjct: 581 LCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPD 640
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +YN + + L ++LLL +M ++G + LI+G+C+ G+I+GA +
Sbjct: 641 VNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKD 700
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAK 356
M IG S A + +V L + GK++ A+ V + M K T+++++H LCK
Sbjct: 701 EMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKA 760
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+L A KL GV++ A ++ GL G
Sbjct: 761 KLSEALKLRGKMALYGVKLDVVAYNVLISGLCADG 795
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 154/335 (45%), Gaps = 3/335 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG-ATRNSLLSCSLDLLDEMLEM 60
++D Y + + + +M+ ++P + TYN L+ G + + LL CS + M M
Sbjct: 507 VLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCS-KFYNIMTRM 565
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD + +S++ L + G D ++ + MI D T N+++ C+ A
Sbjct: 566 GISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKA 625
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ G +P++ TYN + GL +A LR + +L ++ + G P + Y +++
Sbjct: 626 FDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLING 685
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + + M+ G + ++ + G+++EA ++ M+ +
Sbjct: 686 MCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPT 745
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ ++ TL+++ CK+ KL A L +M G + D + +LI GLC G+ A E
Sbjct: 746 VATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYE 805
Query: 301 YMNKIGFDSNLEAYNCIVDRLG-KDGKIDHAINVF 334
M + G N Y ++D + +G+++ + V+
Sbjct: 806 EMKERGLWPNTTTYCTLIDAISTNEGEVEERLLVY 840
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 185/416 (44%), Gaps = 9/416 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + C+ + M ++P+ +T++ +I G + + DEM+++
Sbjct: 295 VLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKL 354
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P ++Y SL+ L + G EA ++ + T +N +L+ CK +A
Sbjct: 355 GHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDA 414
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL-KELGDSGHAPNAITYTTIMK 179
+ +F + + +P+ TY I++ GL + G++ A K L +PN + YT++
Sbjct: 415 VALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFD 474
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
F+ + I M+ KG D V+ + ++G++++ +M + +
Sbjct: 475 GLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTP 534
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG--NIKGARL 297
+ +YN L++ Y K+ L + M + G DK T +I GLCK+G ++ L
Sbjct: 535 SLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKML 594
Query: 298 HLEYMNKIGFD----SNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLC 353
M D + L +C D++GK + + N+ + D TY+++ L
Sbjct: 595 KKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGI--IPDVNTYNAIFTGLN 652
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+A L + LL L+ G+ + ++++G+ G + A +++ ++ +S
Sbjct: 653 RASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVS 708
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 159/362 (43%), Gaps = 39/362 (10%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
+SP+ V Y SL G + + + + +EM GI PD + N+++ ++GK ++
Sbjct: 462 LSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVE 521
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
++F M G LTP AT+NI+L+G K + + + + + G P+ +T + +I GL
Sbjct: 522 KLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGL 581
Query: 147 CKAGRLRTARWILKEL-------------------------GDS----------GHAPNA 171
CK+G L +LK++ G + G P+
Sbjct: 582 CKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDV 641
Query: 172 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 231
TY I R + +L M +G T Y ++I ++G ++ A ++
Sbjct: 642 NTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDE 701
Query: 232 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
M GV V+ + ++ + GK+E A L+LD M ++ T T L+ LCK
Sbjct: 702 MEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAK 761
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSS 347
+ A M G ++ AYN ++ L DG A N++E M+ + ++ TY +
Sbjct: 762 LSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWPNTTTYCT 821
Query: 348 MV 349
++
Sbjct: 822 LI 823
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 181/438 (41%), Gaps = 44/438 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLI----------------AGATR- 43
+LI+ +C+ ++ +M +AG++P+ V Y +LI A TR
Sbjct: 225 VLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRT 284
Query: 44 ---------NSLLSC---------SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
N L+S + D + M + + P+ +++ +++ LG +A
Sbjct: 285 GHDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKA 344
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+F +MI P T+ +L GLCK A ++ L + YN ++
Sbjct: 345 FSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSE 404
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS-AMKRKGYTF 204
CK G+L A + E+ P++ TY I+ R K L A+ R +
Sbjct: 405 TCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSP 464
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ Y ++ K+G+ A+ E+M G+ D ++ N +++ Y + GK+E L
Sbjct: 465 NKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLF 524
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+M+ T+ IL+ G K ++ M ++G + + I+ L K
Sbjct: 525 IKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKS 584
Query: 325 GKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
G +D + + M ++D+ T + ++ N C+ ++ A LL +K+ + I+
Sbjct: 585 GMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLL--NIKNLLGIIPDVN 642
Query: 381 --KAVVDGLRHSGCRREA 396
A+ GL + RE+
Sbjct: 643 TYNAIFTGLNRASALRES 660
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 93/220 (42%), Gaps = 35/220 (15%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLI C+ + +LN GI PDV TYN++ G R S L S LL +MLE
Sbjct: 611 MLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLER 670
Query: 61 GIPPDVWSYNSLMH-----------------------------------CLFQLGKPDEA 85
GI P Y SL++ L Q GK +EA
Sbjct: 671 GITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEA 730
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
V M+ L P ATF +++ LCK AL++ + +G ++V YN+LI G
Sbjct: 731 MLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISG 790
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 185
LC G A + +E+ + G PN TY T++ N
Sbjct: 791 LCADGDALAAFNLYEEMKERGLWPNTTTYCTLIDAISTNE 830
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 201/413 (48%), Gaps = 41/413 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
MLID + + +D G I R+ ++ + P+VVTYN +I G + SL++ + M +
Sbjct: 226 MLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTK 285
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK------ 113
D+++Y+SL+H L + G D A RV+++++ L T N MLNG C+
Sbjct: 286 NEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKE 345
Query: 114 ----------------------------NRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
N + A+ ++ L K G PE TY +LI G
Sbjct: 346 SFELWMVMGKENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHG 405
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCK GRL A I KE D +A Y++++ + + + I++ M ++GY D
Sbjct: 406 LCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLD 465
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+I FV+ +L++A ++ +M G IVSYNTLI CK + AY +
Sbjct: 466 PHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVK 525
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
EM ++ ++ D T ++L+DGLC+ I+ A L + ++K GF ++ YN ++ L
Sbjct: 526 EMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDK-GFKPDITMYNILMHGLCSV 584
Query: 325 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
K++ A+ ++ M+ V + T ++++ L K + AS++ LK G+
Sbjct: 585 CKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGL 637
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 184/367 (50%), Gaps = 8/367 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ + ++L+ M + PDV +Y +LI G + L +L + DEM
Sbjct: 156 ILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVR 215
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYTD 118
G+ DV YN L+ F+ G D+ +++ ++ C + P T+NIM+NGLCK D
Sbjct: 216 GVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCS-VYPNVVTYNIMINGLCKCGRFD 274
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
+L ++ + K+ ++ TY+ LI GLC+AG + A + KE+ +S +A+T+ ++
Sbjct: 275 ESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAML 334
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
R K K E+ M ++ Y +I + G+++EA E + G +
Sbjct: 335 NGFCRAGKIKESFELWMVMGKENCQ-TVVSYNILIKGLFENGKVEEAISIWELLCKKGCR 393
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+ +Y LI+ CK G+L A + E E + D Y ++ ++DGLCK G + A
Sbjct: 394 PESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISI 453
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCK 354
+ M+K G+ + N +++ + K++ AIN F ME K +Y++++ LCK
Sbjct: 454 VNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCK 513
Query: 355 AKRLPSA 361
A+R A
Sbjct: 514 AERFSEA 520
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 184/377 (48%), Gaps = 13/377 (3%)
Query: 36 SLIAGATRNSLLSCSLDLLDEMLEM-GIPPDVWSYNSLMHCLFQLGKPDEA---NRVFQD 91
++I +N + + +LD M ++ G P V SYN+L++ +L + D A +R F+
Sbjct: 85 TVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFES 144
Query: 92 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
M D++P T+NI++ CK + + A+ + + P++ +Y LI G+ K G
Sbjct: 145 M---DVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGD 201
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG-FGYC 210
L A + E+ G + Y ++ F++ Y G EI + + + Y
Sbjct: 202 LLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYN 261
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
+I K GR E+ + E+M + + D+ +Y++LI+ C+ G ++ A + E+ +
Sbjct: 262 IMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVES 321
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
D TH +++G C+AG IK + M K + + +YN ++ L ++GK++ A
Sbjct: 322 SLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQT-VVSYNILIKGLFENGKVEEA 380
Query: 331 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
I+++E + K +S TY ++H LCK RL A K+ ++ A ++VDG
Sbjct: 381 ISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDG 440
Query: 387 LRHSGCRREAKKIQSKI 403
L G EA I +++
Sbjct: 441 LCKEGRMDEAISIVNQM 457
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 120/247 (48%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D C+ D +I+N+M + G D N LI G R S L +++ EM G
Sbjct: 437 MVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKG 496
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + SYN+L+ L + + EA ++M+ + P T +++++GLC+ + + AL
Sbjct: 497 CSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMAL 556
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ GF P++ YNIL+ GLC +L A + + S PN +T T+M+
Sbjct: 557 NLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGL 616
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ R Y+ EI + + G D Y I R+ +A +++ + G+
Sbjct: 617 YKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTA 676
Query: 242 VSYNTLI 248
V++N L+
Sbjct: 677 VTWNILV 683
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 134/291 (46%), Gaps = 3/291 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
+ +I + + G P+ TY LI G +N L+ +L + E + D ++Y+S+
Sbjct: 378 EEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSM 437
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ L + G+ DEA + M N ++NG + ++A+ FR ++ G
Sbjct: 438 VDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGC 497
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P +V+YN LIKGLCKA R A +KE+ + P+ IT + +M + +K ++ L
Sbjct: 498 SPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALN 557
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ KG+ D Y ++ + +L++A M ++V+ NTL+
Sbjct: 558 LWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLY 617
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
K E A + D + K G D ++ I I GLC I A +E++N
Sbjct: 618 KVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDA---IEFLN 665
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 156/348 (44%), Gaps = 41/348 (11%)
Query: 31 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 90
VV+YN LI G N + ++ + + + + G P+ +Y L+H L + G+ ++A ++F+
Sbjct: 361 VVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFK 420
Query: 91 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 150
+ G ++ M++GLCK D A+ + + K G+ + N LI G +A
Sbjct: 421 EAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRAS 480
Query: 151 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
+L A +E+ G +P ++Y T++K G C
Sbjct: 481 KLEDAINFFREMECKGCSPTIVSYNTLIK----------------------------GLC 512
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
K R EA ++++M+ + D+++ + L++ C+E K+E A L + +
Sbjct: 513 -------KAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDK 565
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
GF+ D + IL+ GLC ++ A +M + NL N +++ L K + A
Sbjct: 566 GFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKA 625
Query: 331 INVFESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+++ + +KD +Y+ + LC R+ A + L L G+
Sbjct: 626 SEIWDCI-LKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGI 672
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 92/184 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ F Y+ + M E PD++T + L+ G + + +L+L + L+ G
Sbjct: 507 LIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKG 566
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ YN LMH L + K ++A +++ M P T N ++ GL K R + A
Sbjct: 567 FKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKAS 626
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + K G P++++YNI IKGLC R+ A L + + G P A+T+ +++
Sbjct: 627 EIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRAA 686
Query: 182 FRNR 185
R
Sbjct: 687 VNFR 690
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D CQ + + + + G PD+ YN L+ G L +L L M
Sbjct: 541 LLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRS 600
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P++ + N+LM L+++ ++A+ ++ ++ L P ++NI + GLC +A
Sbjct: 601 TCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDA 660
Query: 121 LRMFRGLQKHGFVPELVTYNILIKG 145
+ G +P VT+NIL++
Sbjct: 661 IEFLNDALNRGILPTAVTWNILVRA 685
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 198/409 (48%), Gaps = 6/409 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C G+++L ++ + G PD VT N+LI G + +L D++L
Sbjct: 99 ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT-PCTATFNIMLNGLCKNRYTDN 119
G + SY +L++ + ++G A + F I G LT P +N +++ +CK +
Sbjct: 159 GFQLNQVSYATLINGVCKIGDTRAAIK-FLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSE 217
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +F + G ++VTYN LI G C G+L+ A +L E+ PN TY ++
Sbjct: 218 AYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ K K +L+ M + D Y T++ + + +K+A M GV
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+ +Y LIN +CK ++ A L EM ++ T++ LIDGLCK+G I +
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLI 397
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDS-FTYSSMVHNLCKA 355
+ M G +++ Y+ ++D L K+G +D AI +F M E++ + FT++ ++ LCK
Sbjct: 398 DEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKG 457
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
RL A ++ L G + +++G G EA + SK+
Sbjct: 458 GRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKME 506
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 185/376 (49%), Gaps = 4/376 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ A L ++ PDVV YN++I + L+S + L EM G
Sbjct: 170 LINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKG 229
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I DV +YN+L++ +GK EA + +M+ + P T+NI+++ LCK A
Sbjct: 230 ISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAK 289
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K P+++TY+ L+ G ++ A+ + + G P+ TYT ++
Sbjct: 290 SVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGF 349
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N+ L + M +K Y ++I K GR+ D +++M G D+
Sbjct: 350 CKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADV 409
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y++LI+ CK G L+ A L ++M+ Q + +T TIL+DGLCK G +K A+ +
Sbjct: 410 ITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQD 469
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G+ N+ YN +++ K G ++ A+ + ME + ++FT+ +++ L K
Sbjct: 470 LLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDE 529
Query: 358 LPSASKLLLSCLKSGV 373
A KLL + G+
Sbjct: 530 NDKAEKLLRQMIARGL 545
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 186/400 (46%), Gaps = 4/400 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D + NRM +P ++ +N ++ + S ++ L + GI PD+ + N L
Sbjct: 41 DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
++C +G+ V ++ P T T N ++ GLC AL L GF
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
V+Y LI G+CK G R A L+++ P+ + Y TI+ + +
Sbjct: 161 QLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYG 220
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ S M KG + D Y T+I F +G+LKEA + +MV + ++ +YN L++ C
Sbjct: 221 LFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
KEGK++ A +L M K + D T++ L+DG +K A+ M+ +G ++
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSC 368
Y +++ K+ +D A+N+F+ M K+ TYSS++ LCK+ R+ L+
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
G +++DGL +G A + +K++ +I
Sbjct: 401 RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEI 440
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 109/201 (54%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ D + M + + P +VTY+SLI G ++ +S DL+DEM +
Sbjct: 344 ILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDR 403
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P DV +Y+SL+ L + G D A +F M ++ P TF I+L+GLCK +A
Sbjct: 404 GQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDA 463
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ L G+ + TYN++I G CK G L A +L ++ D+G PNA T+ TI+
Sbjct: 464 QEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIA 523
Query: 181 CFRNRKYKLGLEILSAMKRKG 201
F+ + ++L M +G
Sbjct: 524 LFKKDENDKAEKLLRQMIARG 544
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 197/398 (49%), Gaps = 7/398 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE---MGIPPDVWSY 69
DA +L RM E PDV + L+ G + +L+LL M + G PDV SY
Sbjct: 140 DAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSY 199
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
++++ F+ G D+A + +M+ ++P T++ ++ LCK + D A+ + + K
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVK 259
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
+G +P +TYN ++ G C + + + A LK++ G P+ +TY ++M +N +
Sbjct: 260 NGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTE 319
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+I +M ++G D YCT++ + G L E ++ MV +G+ D +N LI
Sbjct: 320 ARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILIC 379
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
Y K+ K++ A L+ +M + G + T+ +I LCK+G++ A L+ E M G
Sbjct: 380 AYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTP 439
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
N+ Y ++ L K D A + M + ++ ++S++H+ CK R+ + KL
Sbjct: 440 NIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLF 499
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++ GV+ ++DG +G EA K+ S +
Sbjct: 500 DLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM 537
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 187/391 (47%), Gaps = 4/391 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D Y+ + M + ISPDVVTY+S+IA + + ++++L M++ G+ P+ +YNS+
Sbjct: 213 DKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSI 272
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+H +P EA + M + P T+N +++ LCKN + A ++F + K G
Sbjct: 273 LHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGL 332
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P++ TY L++G G L +L + +G P+ + ++ + K +
Sbjct: 333 EPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAML 392
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ S M++ G + Y VI K G + +A Y EQM+ +G+ +I+ Y +LI+ C
Sbjct: 393 VFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLC 452
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K + A L+ EM +G + +I CK G + + + M +IG N+
Sbjct: 453 IFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVI 512
Query: 313 AYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
Y+ ++D GK+D A + SM D TY+++++ C+ R+ A L
Sbjct: 513 TYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEM 572
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ SGV ++ GL H+ AK++
Sbjct: 573 VSSGVSPNIITYNIILQGLFHTRRTAAAKEL 603
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 190/402 (47%), Gaps = 4/402 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ YC L +MR G+ PDVVTYNSL+ +N + + + D M + G
Sbjct: 272 ILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRG 331
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ +Y +L+ G E + + M+ + P FNI++ K D A+
Sbjct: 332 LEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAM 391
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++HG P +VTY +I LCK+G + A +++ D G PN I YT+++
Sbjct: 392 LVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSL 451
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K+ E++ M +G + + ++I + K GR+ E+ + MV GV+ ++
Sbjct: 452 CIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNV 511
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y+TLI+ YC GK++ A LL M G + D T+ LI+G C+ + A +
Sbjct: 512 ITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKE 571
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHNLCKAKR 357
M G N+ YN I+ L + A + + +S + TY+ ++H LCK
Sbjct: 572 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNL 631
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
A ++ + + +++ ++ L G EAK +
Sbjct: 632 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 673
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 190/436 (43%), Gaps = 53/436 (12%)
Query: 14 AGYTILNRMREAG---ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
A + NRM AG ++P V TY LI R L L +++ G + ++
Sbjct: 67 AAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFT 126
Query: 71 SLMHCLFQLGKPDEA-NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL-- 127
L+ L + +A + V + M P + I+L GLC + AL + +
Sbjct: 127 PLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMAD 186
Query: 128 -QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
+ G P++V+Y +I G K G A E+ D +P+ +TY++I+ + +
Sbjct: 187 DRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQA 246
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
+E+L+ M + G + Y +++ + + KEA ++++M +DGV+ D+V+YN+
Sbjct: 247 MDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNS 306
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG---------------- 290
L++ CK G+ A + D M K+G E D T+ L+ G G
Sbjct: 307 LMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNG 366
Query: 291 -------------------NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
+ A L M + G + N+ Y ++ L K G +D A+
Sbjct: 367 IHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAM 426
Query: 332 NVFESMEVKDSFT-----YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
FE M + + T Y+S++H+LC + A +L+L L G+ + +
Sbjct: 427 LYFEQM-IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICL----NTIFFNS 481
Query: 387 LRHSGCRREAKKIQSK 402
+ HS C +E + I+S+
Sbjct: 482 IIHSHC-KEGRVIESE 496
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 181/397 (45%), Gaps = 43/397 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI AY + D + ++MR+ G++P+VVTY ++I ++ + ++ ++M++
Sbjct: 376 ILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDE 435
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P++ Y SL+H L K D+A + +M+ + T FN +++ CK +
Sbjct: 436 GLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIES 495
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F + + G P ++TY+ LI G C AG++ A +L + G P+ +TY T++
Sbjct: 496 EKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLIN- 554
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
GYC ++ R+ +A ++MV+ GV +
Sbjct: 555 ---------------------------GYC-------RVSRMDDALALFKEMVSSGVSPN 580
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++YN ++ + AA L + K G + + T+ I++ GLCK N+ L +
Sbjct: 581 IITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCK-NNLTDEALRM- 638
Query: 301 YMNKIGFDSNLE--AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 354
+ N D LE +N ++ L K G+ D A ++F + V + +TY M N+
Sbjct: 639 FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 698
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
L +L S +G + +V L G
Sbjct: 699 QGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRG 735
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 97/240 (40%), Gaps = 35/240 (14%)
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
P TY ++ CC R + LG L + +KG+ + + ++ R +A D
Sbjct: 85 PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144
Query: 229 MEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ---GFECDKYTHTILID 284
+ + +T+ D+ S L+ C E + + A LL M G D ++T +I+
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT 344
G K G+ D Y+ ++DR +I D T
Sbjct: 205 GFFKEGD---------------SDKAYSTYHEMLDR-----RIS-----------PDVVT 233
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
YSS++ LCK + + A ++L + +K+GV +++ G S +EA K+R
Sbjct: 234 YSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMR 293
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 93/239 (38%), Gaps = 45/239 (18%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG--------------------- 40
LI+ YC+ D + M +G+SP+++TYN ++ G
Sbjct: 552 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSG 611
Query: 41 -----ATRNSLLS--CSLDLLDEMLEM-------GIPPDVWSYNSLMHCLFQLGKPDEAN 86
+T N +L C +L DE L M + + ++N ++ L ++G+ DEA
Sbjct: 612 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAK 671
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+F L P T+ +M + + ++F ++ +G + N +++ L
Sbjct: 672 DLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVREL 731
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC----------FRNRKYKLGLEILS 195
+ G + A L + + + A T + + F KYK +E LS
Sbjct: 732 LQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKYQEYHRFLPEKYKSFIESLS 790
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 194/413 (46%), Gaps = 28/413 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD------ 55
L+ AYC Y +L +M + G P V YN LI G+ S + DLLD
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILI-GSICGDKDSLNCDLLDLAEKAY 436
Query: 56 -EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
EML G+ + + +S CL GK ++A V ++MI P T+T++ +LN LC
Sbjct: 437 SEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNA 496
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
+ A +F +++ G V ++ TY I++ CKAG + AR E+ + G PN +TY
Sbjct: 497 SKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTY 556
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM-- 232
T ++ + +K E+ M +G + Y +I K G++++A E+M
Sbjct: 557 TALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCG 616
Query: 233 ---VTD-----------GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
V D + ++V+Y L++ +CK ++E A LLD M +G E ++
Sbjct: 617 SKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIV 676
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+ LIDGLCK G + A+ M++ GF + L Y+ ++DR K + D A V M
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736
Query: 339 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ Y+ M+ LCK + A KL+ + G + A++DG
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 202/431 (46%), Gaps = 61/431 (14%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D++C+ + N MRE G +P+VVTY +LI + +S + +L + ML
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICG--DLT---------------PCT 101
G P++ +Y++L+ HC + G+ ++A ++F+ M CG D+ P
Sbjct: 583 GCLPNIVTYSALIDGHC--KAGQVEKACQIFERM-CGSKDVPDVDMYFKQYDDNSERPNV 639
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
T+ +L+G CK+ + A ++ + G P + Y+ LI GLCK G+L A+ + E
Sbjct: 640 VTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE 699
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ + G TY++++ F+ ++ L ++LS M + Y +I K+G+
Sbjct: 700 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 759
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
EA M+ M G Q ++V+Y +I+ + GK+E LL+ M +G + T+ +
Sbjct: 760 TDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV 819
Query: 282 LIDGLCKAGNIKGARLHLEYM------------------------------NKIGFDSN- 310
LID CK G + A LE M ++IG D
Sbjct: 820 LIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTA 879
Query: 311 --LEAYNCIVDRLGKDGKIDHAINVFESME------VKDSFTYSSMVHNLCKAKRLPSAS 362
L Y ++D L K +++ A+ + E + V S TY+S++ +LC A ++ +A
Sbjct: 880 PFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAF 939
Query: 363 KLLLSCLKSGV 373
+L K GV
Sbjct: 940 QLFSEMTKKGV 950
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 165/353 (46%), Gaps = 16/353 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C + + + M+ G+ DV TY ++ + L+ + +EM E+G
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +Y +L+H + K AN +F+ M+ P T++ +++G CK + A
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608
Query: 122 RMFRGLQKHGFVPEL----------------VTYNILIKGLCKAGRLRTARWILKELGDS 165
++F + VP++ VTY L+ G CK+ R+ AR +L +
Sbjct: 609 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 668
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
G PN I Y ++ + K E+ + M G+ + Y ++I + K+ R A
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 728
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ + +M+ + ++V Y +I+ CK GK + AY L+ ME++G + + T+T +IDG
Sbjct: 729 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 788
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
G I+ LE M G N Y ++D K+G +D A N+ E M+
Sbjct: 789 FGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 841
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 188/409 (45%), Gaps = 23/409 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ F+ LNRMR P+VVTY++L+ G L +L+ M+ G
Sbjct: 308 LISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEG 367
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYT--- 117
P +NSL+H G A ++ + M+ CG + P +NI++ +C ++ +
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM-PGYVVYNILIGSICGDKDSLNC 426
Query: 118 ---DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D A + + + G V + + + LC AG+ A +++E+ G P+ TY
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
+ ++ K +L + MKR G D + Y ++ +F K G +++A + +M
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G ++V+Y LI+ Y K K+ A L + M +G + T++ LIDG CKAG ++
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCK 354
A E M +++ Y D ++ E + TY +++ CK
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYD---------------DNSERPNVVTYGALLDGFCK 651
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ R+ A KLL + G + A++DGL G EA+++++++
Sbjct: 652 SHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 161/332 (48%), Gaps = 4/332 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D +C+ + +L+ M G P+ + Y++LI G + L + ++ EM E G
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P +++Y+SL+ F++ + D A++V M+ P + M++GLCK TD A
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + +++ G P +VTY +I G G++ T +L+ +G G APN +TY ++ C
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 824
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N + +L MK+ + GY VI F K E+ ++++ D +
Sbjct: 825 CKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFL 882
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY--THTILIDGLCKAGNIKGARLHL 299
Y LI+ K +LE A LL+E+ Y T+ LI+ LC A ++ A
Sbjct: 883 SVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLF 942
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
M K G ++++ ++ L ++ KI A+
Sbjct: 943 SEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 172/410 (41%), Gaps = 48/410 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ SF L R+++ P TYN LI + L + + EM
Sbjct: 205 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 264
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ D ++ + L ++GK EA + + + P T + +++GLC+ + A
Sbjct: 265 NLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEA 321
Query: 121 LRMFRGLQKHGFVPELVTY-----------------------------------NILIKG 145
+ ++ +P +VTY N L+
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK------YKLGLEILSAMKR 199
C +G A +LK++ GH P + Y ++ ++ L + S M
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLA 441
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
G + + G+ ++A + +M+ G D +Y+ ++N C K+E
Sbjct: 442 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMEL 501
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A+LL +EM++ G D YT+TI++D CKAG I+ AR M ++G N+ Y ++
Sbjct: 502 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIH 561
Query: 320 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
K K+ +A +FE+M + + TYS+++ CKA ++ A ++
Sbjct: 562 AYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 611
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 174/414 (42%), Gaps = 48/414 (11%)
Query: 35 NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 94
N L+ RN S +L+ L + + P +YN L+ + + D A+ + ++M
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
+L T LCK AL + ++ FVP+ V Y LI GLC+A
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEE 320
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-----YTFDGF-- 207
A L + + PN +TY+T++ C ++ +L+ M +G F+
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380
Query: 208 GYCT---------VIAAFVKIGRLKEATDY-------------------------MEQMV 233
YCT ++ VK G + Y +M+
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
GV L+ ++ ++ C GK E A+ ++ EM QGF D T++ +++ LC A ++
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
A L E M + G +++ Y +VD K G I+ A F M + TY++++
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
H KAK++ A++L + L G A++DG +G +A +I ++
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 41/231 (17%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ D Y ++ M E G P+VVTY ++I G + L+LL+ M G
Sbjct: 750 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 809
Query: 62 IPPDVWSYNSLM-HCLFQLGKPDEANRVFQDM---------------ICG---------- 95
+ P+ +Y L+ HC + G D A+ + ++M I G
Sbjct: 810 VAPNYVTYRVLIDHCC-KNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLG 868
Query: 96 --------DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV----TYNILI 143
D P + + ++++ L K + + ALR+ + F LV TYN LI
Sbjct: 869 LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT--FSATLVDYSSTYNSLI 926
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
+ LC A ++ TA + E+ G P ++ +++K FRN K L +L
Sbjct: 927 ESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 78/161 (48%), Gaps = 4/161 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ + D + +L M++ Y +I G + + S L LLDE+ +
Sbjct: 819 VLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIES--LGLLDEIGQD 876
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM--ICGDLTPCTATFNIMLNGLCKNRYTD 118
P + Y L+ L + + + A R+ +++ L ++T+N ++ LC +
Sbjct: 877 DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVE 936
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL 159
A ++F + K G +PE+ ++ LIKGL + ++ A +L
Sbjct: 937 TAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 184/395 (46%), Gaps = 35/395 (8%)
Query: 5 AYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP 64
A C+ D T+L M G PD V Y ++I ++ + LLDEM MG
Sbjct: 181 ALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSA 240
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM- 123
DV ++N ++H L LG+ EA R+ M+ P T+ +L GLC + A M
Sbjct: 241 DVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTML 300
Query: 124 ------------------------------FRGLQKHGFVPELVTYNILIKGLCKAGRLR 153
+ + G P+ TY+ILI GLCK GRL
Sbjct: 301 GRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLG 360
Query: 154 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
+A +L+E+ D G AP+ +TYT ++ RN + +L M KG + + GY +I
Sbjct: 361 SAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMI 420
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
A K R+ +A +M++M + G + DI +YNT+I C ++E A L + + +G
Sbjct: 421 CAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVV 480
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
+ T+ LI L + G+ + A M G ++ +YN ++ L +DG +D +I +
Sbjct: 481 ANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIML 540
Query: 334 FESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
M K ++ +Y+ ++ LCK +R+ A +L
Sbjct: 541 LSEMAEKGIKPNNVSYNLLISELCKTRRVRDALEL 575
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 186/377 (49%), Gaps = 10/377 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C + T+L R+ E +VV +N++I + L + +L + M G
Sbjct: 283 LLKGLCLASQVEEARTMLGRVPEL----NVVLFNTVIGRCLLDGKLKEAAELYETMGSKG 338
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PPD +Y+ L+H L +LG+ A ++ ++M P T+ I+L+ C+N DN
Sbjct: 339 CPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIR 398
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + G L YN +I +CK R+ A ++E+ G+ P+ TY TI+
Sbjct: 399 AMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHL 458
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N + + + + +G + Y T+I A ++ G ++A MV G LDI
Sbjct: 459 CNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDI 518
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLE 300
VSYN LI C++G ++ + +LL EM ++G + + ++ +LI LCK ++ A L E
Sbjct: 519 VSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKE 578
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAK 356
+N+ ++ YN +++ L K G + A+N+ E + +D TY+ ++ CKA+
Sbjct: 579 MLNQ-ELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKAR 637
Query: 357 RLPSASKLLLSCLKSGV 373
L AS LL + SG+
Sbjct: 638 LLHDASMLLNRAVTSGI 654
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 182/377 (48%), Gaps = 11/377 (2%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDE 84
+SP +YN+++A R + L L M+ +PP ++++ L +LG+ DE
Sbjct: 131 AVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADE 190
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
A + + M P T + +++ LC + A + + G ++ T+N ++
Sbjct: 191 ALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVH 250
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYT 203
GLC GRLR A ++ + G PNAITY ++K C ++ +E M +
Sbjct: 251 GLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQ-----VEEARTMLGRVPE 305
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
+ + TVI + G+LKEA + E M + G D +Y+ LI+ CK G+L +A L
Sbjct: 306 LNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKL 365
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
L EME +GF T+TIL+ C+ G R LE M+ G NLE YN ++ + K
Sbjct: 366 LREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCK 425
Query: 324 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
D ++D A+ + M+ + D TY++++++LC ++ A L + L GV
Sbjct: 426 DRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAIT 485
Query: 380 QKAVVDGLRHSGCRREA 396
++ L +G ++A
Sbjct: 486 YNTLIHALLRNGSWQDA 502
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 148/332 (44%), Gaps = 35/332 (10%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M G PD TY+ LI G + L ++ LL EM + G P + +Y L+H + G
Sbjct: 334 MGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGM 393
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
D + + M L+ +N M+ +CK+R D+A+R + ++ G+ P++ TYN
Sbjct: 394 WDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNT 453
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI-------- 193
+I LC ++ A ++ + L G NAITY T++ RN ++ + +
Sbjct: 454 IIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHG 513
Query: 194 ---------------------------LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
LS M KG + Y +I+ K R+++A
Sbjct: 514 CSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDAL 573
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ + DIV+YNTLIN CK G + AA LL+++ + D T+ ILI
Sbjct: 574 ELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWH 633
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
CKA + A + L G N + +V
Sbjct: 634 CKARLLHDASMLLNRAVTSGITPNERTWGIMV 665
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 150/288 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ ++C+ +D +L M + G+S ++ YN +I ++ + ++ + EM
Sbjct: 383 ILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQ 442
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN++++ L + +EA +F++++ + T+N +++ L +N +A
Sbjct: 443 GYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDA 502
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + HG ++V+YN LIK LC+ G + + +L E+ + G PN ++Y ++
Sbjct: 503 ISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISE 562
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ R+ + LE+ M + T D Y T+I K+G + A + +E++ + V D
Sbjct: 563 LCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHAD 622
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
I++YN LI+ +CK L A +LL+ G ++ T I++ +
Sbjct: 623 IITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVR 670
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 200/406 (49%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ S++ +L+ M G+ P+ T+N ++ + R + + + +EML+ G
Sbjct: 300 LINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRG 359
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ S++S++ + G+ A F+ M L P T + I++NG C+N AL
Sbjct: 360 VVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGAL 419
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+M + + G V ++VTYN L+ GLC+ L A + KE+ + G P+ T TT++
Sbjct: 420 KMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGY 479
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ L + M + D Y T++ F K+G +++A + M++ +
Sbjct: 480 CKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSY 539
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+S++ LIN +C G + A+ L DEM+++G + T +I G +AGN+ A L
Sbjct: 540 ISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNT 599
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G + YN +++ K+ D A + +ME + + TY++++ + R
Sbjct: 600 MISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGR 659
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ A +L + G+ KS ++++G +EA ++ ++
Sbjct: 660 MQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEM 705
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 191/378 (50%), Gaps = 6/378 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++A C+ D L+ M E G+ D+VTYN+L+ R L+S + L+D M
Sbjct: 229 IMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGK 288
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P +++YN+L++ L + G + A RV +M+ L P ATFN ML C+ A
Sbjct: 289 GLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEA 348
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+F + + G VP+L++++ ++ + G L A +++ G P+ + YT ++
Sbjct: 349 ERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILING 408
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
RN L++ + M +G D Y T++ + L +A + ++MV GV D
Sbjct: 409 YCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPD 468
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHL 299
+ TLI+ YCK+G + A L + M + + D T+ L+DG CK G ++ A+ L
Sbjct: 469 FYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWY 528
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ +++ F S + +++ +++ G + A +++ M+ K T ++++ +A
Sbjct: 529 DMISREIFPSYI-SFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRA 587
Query: 356 KRLPSASKLLLSCLKSGV 373
L A+ L + + GV
Sbjct: 588 GNLSKANDFLNTMISEGV 605
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 155/308 (50%), Gaps = 2/308 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ + N M E G DVVTYN+L+ G R +L + +L EM+E
Sbjct: 404 ILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVER 463
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD ++ +L+H + G +A +F+ M L P T+N +++G CK + A
Sbjct: 464 GVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKA 523
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + P ++++ILI G C G + A + E+ + G P +T TI+K
Sbjct: 524 KELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKG 583
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + L+ M +G D Y T+I +FVK A + M G+ +
Sbjct: 584 YLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPN 643
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
+V+YN ++ + + G+++ A ++L +M +G DK T+T LI+G N+K A R+H
Sbjct: 644 LVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHD 703
Query: 300 EYMNKIGF 307
E + + GF
Sbjct: 704 EMLQR-GF 710
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 143/274 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ D + M E G+ PD T +LI G ++ ++ +L L + M
Sbjct: 440 LLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRS 499
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +YN+LM ++G+ ++A ++ DMI ++ P +F+I++NG C A
Sbjct: 500 LKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAF 559
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R++ +++ G P LVT N +IKG +AG L A L + G P+ ITY T++
Sbjct: 560 RLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSF 619
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + +++ M+ +G + Y ++ F + GR++EA + +M+ G+ D
Sbjct: 620 VKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDK 679
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
+Y +LIN Y + ++ A+ + DEM ++GF D
Sbjct: 680 STYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 180/408 (44%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI Y Q G +R+ G + N+L+ + + + + ++ ++
Sbjct: 159 LLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKS 218
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G +V++ N +++ L + GK D +M + T+N ++N C+ A
Sbjct: 219 GNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEA 278
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P L TYN LI GLCK G A+ +L E+ G PNA T+ ++
Sbjct: 279 FGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVE 338
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + + M ++G D + +++ F + G L A Y E+M G+ D
Sbjct: 339 SCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPD 398
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V Y LIN YC+ + A + +EM ++G D T+ L++GLC+ + A +
Sbjct: 399 TVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFK 458
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + G + ++ KDG + A+++FE+M ++ D TY++++ CK
Sbjct: 459 EMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVG 518
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A +L + + + +++G G EA ++ +++
Sbjct: 519 EMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMK 566
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 176/394 (44%), Gaps = 4/394 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + D + + ++G +V T N ++ ++ L L EM E G
Sbjct: 195 LLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKG 254
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D+ +YN+L++ + G EA + M L P T+N ++NGLCK + A
Sbjct: 255 VYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAK 314
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + G P T+N ++ C+ + A + E+ G P+ I++++I+
Sbjct: 315 RVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVF 374
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
RN + L MK G D Y +I + + + A +MV G +D+
Sbjct: 375 SRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDV 434
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTL+N C+ L+ A L EM ++G D YT T LI G CK GN+ A E
Sbjct: 435 VTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFET 494
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKR 357
M ++ YN ++D K G+++ A ++ M ++ F ++S +++ C
Sbjct: 495 MTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGL 554
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ A +L + G++ ++ G +G
Sbjct: 555 VSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAG 588
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 159/377 (42%), Gaps = 47/377 (12%)
Query: 66 VWSYNSLMHCLFQLGKPDEANRVFQDM----ICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
V ++ L+ Q K E + FQ + C + C A +L + K + D A
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNA----LLGAIVKVGWVDLAW 209
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC- 180
+++ K G + + T NI++ LCK G+L L E+ + G + +TY T++
Sbjct: 210 KVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAY 269
Query: 181 --------------CFRNRKYKLGLEILSAM----------KRKGYTFD---GFGYCTVI 213
C + K GL +A+ +R D G G C
Sbjct: 270 CRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNA 329
Query: 214 AAFVKI-------GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
A F + + EA +M+ GV D++S+++++ ++ + G+L A ++
Sbjct: 330 ATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEK 389
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+ G D +TILI+G C+ ++ GA M + G ++ YN +++ L +
Sbjct: 390 MKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKM 449
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+D A +F+ M + D +T ++++H CK + A L + ++
Sbjct: 450 LDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNT 509
Query: 383 VVDGLRHSGCRREAKKI 399
++DG G +AK++
Sbjct: 510 LMDGFCKVGEMEKAKEL 526
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C + + + M+E GI P +VT N++I G R LS + D L+ M+
Sbjct: 544 ILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISE 603
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+PPD +YN+L++ + D A + +M L P T+N +L G ++ A
Sbjct: 604 GVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEA 663
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
+ + G P+ TY LI G ++ A + E+ G P+
Sbjct: 664 EMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 194/413 (46%), Gaps = 28/413 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD------ 55
L+ AYC Y +L +M + G P V YN LI G+ S + DLLD
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILI-GSICGDKDSLNCDLLDLAEKAY 436
Query: 56 -EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
EML G+ + + +S CL GK ++A V ++MI P T+T++ +LN LC
Sbjct: 437 SEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNA 496
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
+ A +F +++ G V ++ TY I++ CKAG + AR E+ + G PN +TY
Sbjct: 497 SKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTY 556
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM-- 232
T ++ + +K E+ M +G + Y +I K G++++A E+M
Sbjct: 557 TALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCG 616
Query: 233 ---VTD-----------GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
V D + ++V+Y L++ +CK ++E A LLD M +G E ++
Sbjct: 617 SKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIV 676
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+ LIDGLCK G + A+ M++ GF + L Y+ ++DR K + D A V M
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736
Query: 339 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ Y+ M+ LCK + A KL+ + G + A++DG
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 202/431 (46%), Gaps = 61/431 (14%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D++C+ + N MRE G +P+VVTY +LI + +S + +L + ML
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICG--DLT---------------PCT 101
G P++ +Y++L+ HC + G+ ++A ++F+ M CG D+ P
Sbjct: 583 GCLPNIVTYSALIDGHC--KAGQVEKACQIFERM-CGSKDVPDVDMYFKQYDDNSERPNV 639
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
T+ +L+G CK+ + A ++ + G P + Y+ LI GLCK G+L A+ + E
Sbjct: 640 VTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE 699
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ + G TY++++ F+ ++ L ++LS M + Y +I K+G+
Sbjct: 700 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 759
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
EA M+ M G Q ++V+Y +I+ + GK+E LL+ M +G + T+ +
Sbjct: 760 TDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV 819
Query: 282 LIDGLCKAGNIKGARLHLEYM------------------------------NKIGFDSN- 310
LID CK G + A LE M ++IG D
Sbjct: 820 LIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTA 879
Query: 311 --LEAYNCIVDRLGKDGKIDHAINVFESME------VKDSFTYSSMVHNLCKAKRLPSAS 362
L Y ++D L K +++ A+ + E + V S TY+S++ +LC A ++ +A
Sbjct: 880 PFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAF 939
Query: 363 KLLLSCLKSGV 373
+L K GV
Sbjct: 940 QLFSEMTKKGV 950
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 165/353 (46%), Gaps = 16/353 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C + + + M+ G+ DV TY ++ + L+ + +EM E+G
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +Y +L+H + K AN +F+ M+ P T++ +++G CK + A
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608
Query: 122 RMFRGLQKHGFVPEL----------------VTYNILIKGLCKAGRLRTARWILKELGDS 165
++F + VP++ VTY L+ G CK+ R+ AR +L +
Sbjct: 609 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 668
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
G PN I Y ++ + K E+ + M G+ + Y ++I + K+ R A
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 728
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ + +M+ + ++V Y +I+ CK GK + AY L+ ME++G + + T+T +IDG
Sbjct: 729 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 788
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
G I+ LE M G N Y ++D K+G +D A N+ E M+
Sbjct: 789 FGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 841
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 188/409 (45%), Gaps = 23/409 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ F+ LNRMR P+VVTY++L+ G L +L+ M+ G
Sbjct: 308 LISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEG 367
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYT--- 117
P +NSL+H G A ++ + M+ CG + P +NI++ +C ++ +
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM-PGYVVYNILIGSICGDKDSLNC 426
Query: 118 ---DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D A + + + G V + + + LC AG+ A +++E+ G P+ TY
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
+ ++ K +L + MKR G D + Y ++ +F K G +++A + +M
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G ++V+Y LI+ Y K K+ A L + M +G + T++ LIDG CKAG ++
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCK 354
A E M +++ Y D ++ E + TY +++ CK
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYD---------------DNSERPNVVTYGALLDGFCK 651
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ R+ A KLL + G + A++DGL G EA+++++++
Sbjct: 652 SHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 166/344 (48%), Gaps = 7/344 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D +C+ + +L+ M G P+ + Y++LI G + L + ++ EM E G
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P +++Y+SL+ F++ + D A++V M+ P + M++GLCK TD A
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + +++ G P +VTY +I G G++ T +L+ +G G APN +TY ++ C
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 824
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N + +L MK+ + GY VI F K E+ ++++ D +
Sbjct: 825 CKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFL 882
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY--THTILIDGLCKAGNIKGARLHL 299
Y LI+ K +LE A LL+E+ Y T+ LI+ LC A ++ A
Sbjct: 883 SVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLF 942
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA---INVFESMEVK 340
M K G ++++ ++ L ++ KI A ++ ME++
Sbjct: 943 SEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMEIQ 986
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 172/410 (41%), Gaps = 48/410 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ SF L R+++ P TYN LI + L + + EM
Sbjct: 205 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 264
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ D ++ + L ++GK EA + + + P T + +++GLC+ + A
Sbjct: 265 NLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEA 321
Query: 121 LRMFRGLQKHGFVPELVTY-----------------------------------NILIKG 145
+ ++ +P +VTY N L+
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK------YKLGLEILSAMKR 199
C +G A +LK++ GH P + Y ++ ++ L + S M
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLA 441
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
G + + G+ ++A + +M+ G D +Y+ ++N C K+E
Sbjct: 442 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMEL 501
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A+LL +EM++ G D YT+TI++D CKAG I+ AR M ++G N+ Y ++
Sbjct: 502 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIH 561
Query: 320 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
K K+ +A +FE+M + + TYS+++ CKA ++ A ++
Sbjct: 562 AYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 611
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 174/414 (42%), Gaps = 48/414 (11%)
Query: 35 NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 94
N L+ RN S +L+ L + + P +YN L+ + + D A+ + ++M
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
+L T LCK AL + ++ FVP+ V Y LI GLC+A
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEE 320
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-----YTFDGF-- 207
A L + + PN +TY+T++ C ++ +L+ M +G F+
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380
Query: 208 GYCT---------VIAAFVKIGRLKEATDY-------------------------MEQMV 233
YCT ++ VK G + Y +M+
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
GV L+ ++ ++ C GK E A+ ++ EM QGF D T++ +++ LC A ++
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
A L E M + G +++ Y +VD K G I+ A F M + TY++++
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
H KAK++ A++L + L G A++DG +G +A +I ++
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 78/161 (48%), Gaps = 4/161 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ + D + +L M++ Y +I G + + S L LLDE+ +
Sbjct: 819 VLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIES--LGLLDEIGQD 876
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM--ICGDLTPCTATFNIMLNGLCKNRYTD 118
P + Y L+ L + + + A R+ +++ L ++T+N ++ LC +
Sbjct: 877 DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVE 936
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL 159
A ++F + K G +PE+ ++ LIKGL + ++ A +L
Sbjct: 937 TAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 191/402 (47%), Gaps = 4/402 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C + ++M G P+VVTY +L+ G ++ L+ +L+L EM+ G
Sbjct: 132 LVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKG 191
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+++YNSL+H L L + + +M+ + P + NI+++ LCK A
Sbjct: 192 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAH 251
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P++VTY L+ G C + A + + +G N ++Y T++
Sbjct: 252 DVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGY 311
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ + + M R+ + Y T+I +GRL++A +MV G ++
Sbjct: 312 CKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNL 371
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y+ L++ CK +L A LL +E + D + I IDG+C+AG+++ AR
Sbjct: 372 VTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSN 431
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G ++ +N ++ L K G +D A +F M+ +++ TY+++ L + +
Sbjct: 432 LAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNK 491
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
A +LL L G S +V L G + K+I
Sbjct: 492 TSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQSVKQI 533
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 181/383 (47%), Gaps = 4/383 (1%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
+M GI PDV T +I + + +L +L ++L++G PD ++ +L+ L +G
Sbjct: 81 KMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVG 140
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K EA VF M+ P T+ ++NGLCK+R AL +F + G P++ TYN
Sbjct: 141 KIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYN 200
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
LI LC + +L E+ S PN ++ ++ + K +++ M +
Sbjct: 201 SLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQG 260
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G D Y ++ + EA + MV +G ++VSYNTLIN YCK +++ A
Sbjct: 261 GVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKA 320
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
L +EM +Q + T++ LI GLC G ++ A M G NL Y+ ++D
Sbjct: 321 MYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDY 380
Query: 321 LGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
L K+ ++ A+ + +++E D Y+ + +C+A L +A L + G++
Sbjct: 381 LCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPD 440
Query: 377 KSAQKAVVDGLRHSGCRREAKKI 399
++ GL G EA K+
Sbjct: 441 VWTHNIMIRGLCKRGLLDEASKL 463
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 196/382 (51%), Gaps = 11/382 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+++C D ++L ++ + G PD T+ +L+ G + +LD+ D+M+
Sbjct: 96 IVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGE 155
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V +Y +LM+ L + + EA +F +MI ++P T+N +++ LC +
Sbjct: 156 GFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHV 215
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K +P +V+ NI++ LCK G++ A ++ + G P+ +TY +M
Sbjct: 216 TTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDG 275
Query: 181 -CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
C R+ + +++ M R G + Y T+I + KI R+ +A E+M +
Sbjct: 276 HCLRSEMDE-AVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIP 334
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ ++Y+TLI+ C G+L+ A L +EM G + T++IL+D LCK + A L
Sbjct: 335 NTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALL 394
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ + D +++ YN +D + + G ++ A ++F ++ + D +T++ M+ LCK
Sbjct: 395 KAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKR 454
Query: 356 KRLPSASKLLLS-----CLKSG 372
L ASKL CL++G
Sbjct: 455 GLLDEASKLFREMDENGCLRNG 476
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 183/400 (45%), Gaps = 4/400 (1%)
Query: 8 QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 67
F + D + +RM P + + L+ + S L L +M GIPPDV+
Sbjct: 33 HFNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVY 92
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+ +++ L + D A V ++ P TATF ++ GLC AL +F +
Sbjct: 93 TLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKM 152
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
GF P +VTY L+ GLCK +L A + E+ G +P+ TY +++ ++
Sbjct: 153 VGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEW 212
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
K +L+ M + + V+ A K G++ EA D ++ M+ GV+ D+V+Y L
Sbjct: 213 KHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAAL 272
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
++ +C +++ A + D M + G C+ ++ LI+G CK I A E M +
Sbjct: 273 MDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQEL 332
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASK 363
N Y+ ++ L G++ AI +F M ++ + TYS ++ LCK RL A
Sbjct: 333 IPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMA 392
Query: 364 LLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
LL + S + +DG+ +G A+ + S +
Sbjct: 393 LLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNL 432
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 146/290 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++DA C+ + +++ M + G+ PDVVTY +L+ G S + ++ + D M+
Sbjct: 236 IVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRN 295
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G +V SYN+L++ ++ + D+A +F++M +L P T T++ +++GLC +A
Sbjct: 296 GCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDA 355
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +F + G +P LVTY+IL+ LCK RL A +LK + S P+ Y +
Sbjct: 356 IALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDG 415
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + ++ S + +G D + + +I K G L EA+ +M +G +
Sbjct: 416 MCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRN 475
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+YNT+ + K A LL+EM +GF D T +L+ L G
Sbjct: 476 GCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDG 525
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 79/162 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ +L + + + PDV YN I G R L + DL +
Sbjct: 376 ILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPR 435
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDVW++N ++ L + G DEA+++F++M T+N + GL +N T A
Sbjct: 436 GLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRA 495
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
+++ + GF ++ T +L+K L G ++ + IL E
Sbjct: 496 IQLLEEMLARGFSADVSTTALLVKMLSDDGLDQSVKQILCEF 537
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 195/417 (46%), Gaps = 28/417 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS--LDLL----D 55
L+ YC + Y + NRM G P V YN I L + LDL+ +
Sbjct: 347 LVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYE 406
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
EML + + + CL +GK ++A ++ ++M+ P T+T+ ++ LC+ +
Sbjct: 407 EMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAK 466
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
+ + +F+ +++ G P++ TY ILI CKAG + AR E+ G +PN +TYT
Sbjct: 467 KVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYT 526
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV-T 234
++ ++++ +I M + Y +I K G +++A + E+++ T
Sbjct: 527 ALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGT 586
Query: 235 DG---------------VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
G + ++V+Y LI+ CK K+ A+ LLD M G E ++ +
Sbjct: 587 SGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVY 646
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
LIDG CK G I A+ M K G+ ++ Y ++DR+ KDG++D A+ V M +
Sbjct: 647 DALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEM-L 705
Query: 340 KDS-----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
DS TY++M+ L K + A LL + G A++DGL +G
Sbjct: 706 NDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTG 762
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 176/379 (46%), Gaps = 20/379 (5%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
C F+ + IL M G PD TY +I + + S L EM G+ PDV
Sbjct: 428 CGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDV 487
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
++Y L+ + G ++A F +M +P T+ +L+ K++ A +F
Sbjct: 488 YTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHR 547
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL-GDSGH---------------APN 170
+ P VTY+ LI GLCKAG ++ A + ++L G SG+ APN
Sbjct: 548 MVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPN 607
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
+TY ++ + +K E+L AM G + Y +I F KIG++ A +
Sbjct: 608 VVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFL 667
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+M G + +Y +LI+ K+G+L+ A +L EM + T+T +IDGL K G
Sbjct: 668 RMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVG 727
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 346
I+ A L M + G N+ Y ++D LGK GK D ++ +F+ M K + TY
Sbjct: 728 EIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYR 787
Query: 347 SMVHNLCKAKRLPSASKLL 365
++++ C A L A LL
Sbjct: 788 VLINHCCAAGLLDEAHLLL 806
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 186/384 (48%), Gaps = 22/384 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID++C+ + + + MR G SP+VVTY +L+ ++ L + D+ M++
Sbjct: 492 ILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDA 551
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD----------------LTPCTATF 104
P+ +Y++L+ L + G+ +A V++ +I + P T+
Sbjct: 552 ACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTY 611
Query: 105 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 164
+++GLCK + +A + + G P + Y+ LI G CK G++ A+ + +
Sbjct: 612 GALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTK 671
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
G+ P+ TYT+++ F++ + L +++LS M + Y +I K+G +++
Sbjct: 672 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEK 731
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A + + M G ++V+Y LI+ K GK +A+ L +M +G + T+ +LI+
Sbjct: 732 ALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLIN 791
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF- 343
C AG + A L L+ M + +L+ Y+C V K K ++ + E ME ++
Sbjct: 792 HCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSK--KFIASLGLLEEMESHETVP 849
Query: 344 ---TYSSMVHNLCKAKRLPSASKL 364
Y ++ + KA RL +A +L
Sbjct: 850 IAPVYGMLIDSFSKAGRLETALEL 873
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 160/353 (45%), Gaps = 16/353 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I CQ + + + M+ AG++PDV TY LI + L+ + DEM +G
Sbjct: 458 VITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVG 517
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +Y +L+H + + +A+ +F M+ P T++ +++GLCK A
Sbjct: 518 CSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKAC 577
Query: 122 RM----------------FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
+ F G P +VTY LI GLCKA ++ A +L + +
Sbjct: 578 EVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAA 637
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
G PN I Y ++ + K E+ M + GY Y ++I K GRL A
Sbjct: 638 GCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 697
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ +M+ D ++V+Y +I+ K G++E A LL ME++G + T+T LIDG
Sbjct: 698 MKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDG 757
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
L K G + + MN G N Y +++ G +D A + + M+
Sbjct: 758 LGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMK 810
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 181/406 (44%), Gaps = 31/406 (7%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F+ + L+RMR P+VVTY +L++G + +++ M+ G P+ +NS
Sbjct: 287 FNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNS 346
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL------RMFR 125
L+H G A ++F M P +NI + +C NA +++
Sbjct: 347 LVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYE 406
Query: 126 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 185
+ V V + LC G+ A ILKE+ G P+ TYT ++ + +
Sbjct: 407 EMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAK 466
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
K + + MKR G D + Y +I +F K G +++A + ++M + G ++V+Y
Sbjct: 467 KVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYT 526
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
L++ Y K +L A+ + M + T++ LIDGLCKAG I+ A
Sbjct: 527 ALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKA---------- 576
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSA 361
E Y ++ G G ++ FE + + TY +++ LCKA+++ A
Sbjct: 577 -----CEVYEKLI---GTSGNVESDF-YFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDA 627
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
+LL + L +G + A++DG G A+++ +RM K
Sbjct: 628 HELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEV--FLRMTK 671
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 156/406 (38%), Gaps = 42/406 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C+ +D L R+++ G P VTYN+L+ + + EM
Sbjct: 174 VLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSAS 233
Query: 61 GIPPDVWSYNSLMHCLFQLGKP--------------------------------DEANRV 88
G D + L ++G+ +EA
Sbjct: 234 GFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSF 293
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
M C P T+ +L+G K + R+ + G P +N L+ G C
Sbjct: 294 LHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCN 353
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTT-IMKCCFRNRKYKLGL-----EILSAMKRKGY 202
AG A + + G P + Y I C + L ++ M
Sbjct: 354 AGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASC 413
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
+ +G+ ++A +++M+ G D +Y +I C+ K+E ++L
Sbjct: 414 VLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFL 473
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
L EM++ G D YT+TILID CKAG I+ AR + M +G N+ Y ++
Sbjct: 474 LFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYL 533
Query: 323 KDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 364
K ++ A ++F M ++ TYS+++ LCKA + A ++
Sbjct: 534 KSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEV 579
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 110/260 (42%), Gaps = 36/260 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID + D +L+ M +P+VVTY ++I G ++ + +L+LL M E G
Sbjct: 684 LIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKG 743
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA- 120
P+V +Y +L+ L + GK D + ++F+ M P T+ +++N C D A
Sbjct: 744 CSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAH 803
Query: 121 --------------------------------LRMFRGLQKHGFVPELVTYNILIKGLCK 148
L + ++ H VP Y +LI K
Sbjct: 804 LLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSK 863
Query: 149 AGRLRTARWILKELGDSGHAPNAIT---YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
AGRL TA + KEL + + N + Y ++++ + + + + M RKG D
Sbjct: 864 AGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPD 923
Query: 206 GFGYCTVIAAFVKIGRLKEA 225
+ +++ +++ + EA
Sbjct: 924 LIVFVSLVKGLIEVNKWDEA 943
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/381 (19%), Positives = 150/381 (39%), Gaps = 48/381 (12%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
Y++L L A R+ +++ D N+++ C++ D AL L+
Sbjct: 137 YDALAEILGFEDPARTAERLLREIGEDDREVLRRLLNVLVRRCCRHGLWDEALEELGRLK 196
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY-------------- 174
G+ P VTYN L++ L AG++ + KE+ SG + T
Sbjct: 197 DFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWA 256
Query: 175 ------------------TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 216
T ++ + + L M+ + Y T+++ F
Sbjct: 257 DALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGF 316
Query: 217 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
+K + + M+T+G + +N+L++ YC G AY L + M G
Sbjct: 317 LKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGY 376
Query: 277 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD---------GKI 327
+ I I +C + A L L+ + K+ ++ L A +C+++++ GK
Sbjct: 377 VAYNIFIGSICGQEELPNAEL-LDLVEKV-YEEMLAA-SCVLNKVNTANFSRCLCGVGKF 433
Query: 328 DHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
+ A + + M V D+ TY+ ++ LC+AK++ + L ++GV +
Sbjct: 434 EKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTIL 493
Query: 384 VDGLRHSGCRREAKKIQSKIR 404
+D +G +A+ ++R
Sbjct: 494 IDSFCKAGLIEQARSWFDEMR 514
>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 418
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 146/283 (51%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
E+LE G PP ++ +N LMH + G+ A VF + L P +FN ++NG +
Sbjct: 126 EILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLG 185
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D R+ + G P++ TY++LI GLCK ++ A +L E+ D+G PN +T+T
Sbjct: 186 DLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFT 245
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T++ +N K L +EI M +G+ D Y T+I + G L +A D +E+M+
Sbjct: 246 TLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMK 305
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G++ D ++Y TLI+ CKEG LE + L M ++ D+ T+T LI GLC+ G A
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDA 365
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
L M +G + Y I++ K G + A + M+
Sbjct: 366 EKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQ 408
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 147/271 (54%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ + + + + + P VV++N+L+ G R L L M
Sbjct: 141 ILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHAT 200
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K DEAN + +M+ L P TF +++G CKN D A
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVDLA 260
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + GF+P+L+TYN LI GLC+ G L AR +++E+ G P+ ITYTT++
Sbjct: 261 MEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDG 320
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ E+ M R+ D Y +I+ + GR +A + +M+T G++ D
Sbjct: 321 SCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREMLTVGLKPD 380
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+Y ++N +CK G ++ A LL EM++ G
Sbjct: 381 NGTYTMIMNEFCKTGDVKTASKLLREMQRNG 411
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 162/344 (47%), Gaps = 4/344 (1%)
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 124
D++ ++ LM + G +A + F+ + T +L L K RY +
Sbjct: 65 DLYVFSGLMLAYLESGFVRDAIQCFRLTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGFY 124
Query: 125 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
+ + + G+ P L +NIL+ CK G +R A+ + + P+ +++ T+M R
Sbjct: 125 KEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRL 184
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
G + SAM G D + Y +I K ++ EA + + +M+ +G+ + V++
Sbjct: 185 GDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTF 244
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
TLI+ +CK GK++ A + +M QGF D T+ LI GLC+ G++ AR +E M
Sbjct: 245 TTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIM 304
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPS 360
G + Y ++D K+G ++ + + M + D TY++++ LC+ R
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGD 364
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
A K+L L G++ +++ +G + A K+ +++
Sbjct: 365 AEKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQ 408
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 90/172 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ D I +M G PD++TYN+LI G R L + DL++EM+ G
Sbjct: 247 LIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y +L+ + G + + + MI ++ T+ +++GLC+ +A
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAE 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+M R + G P+ TY +++ CK G ++TA +L+E+ +G P +T
Sbjct: 367 KMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGPVPGVVT 418
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 181/393 (46%), Gaps = 22/393 (5%)
Query: 29 PDVVTYNSLIAGATRNSL--LSCSLDLLD----------------EMLEMGIPPDVWSYN 70
PD+ AG +N + + C + L+D E E G V++ N
Sbjct: 135 PDIAFRFFWWAGKQKNYIHKIECYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAAN 194
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
SL+ LG +E V++ M + P TFN +LNGL + + ++A R+F ++
Sbjct: 195 SLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECG 254
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
P++V+YN +IKG CKAG + A ++ P+ ITY T+++ C+ +
Sbjct: 255 KIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSC 314
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
L + M+ +G Y VI K GR E + E M G + ++ Y LI+
Sbjct: 315 LHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDA 374
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
Y K G + A L + M+ +GFE D T+ ++++GLCK+G + A + E+ N
Sbjct: 375 YGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVN 434
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLL 366
Y+ ++D LGK G++D A FE M +DS+ Y++++ L K+ ++ A L
Sbjct: 435 AMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFK 494
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
K G ++ GL EA K+
Sbjct: 495 RMEKEGCDQTVYTYTILISGLFKEHRNEEALKL 527
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 185/402 (46%), Gaps = 4/402 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID FD I +E G V NSLI ++ L + M E G
Sbjct: 161 LIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESG 220
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P ++++N L++ L + A RVF+ M CG + P ++N M+ G CK T A+
Sbjct: 221 IEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAM 280
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F ++K P+ +TY LI+ G + + +E+ + G Y+ ++
Sbjct: 281 EKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGL 340
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + G + M +KG + Y +I A+ K G + EA + E+M +G + D
Sbjct: 341 CKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDD 400
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y ++N CK G+L+ A + + + ++ LIDGL KAG + A E
Sbjct: 401 VTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEE 460
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M + G + YN ++D L K GK++ A+ +F+ ME + +TY+ ++ L K R
Sbjct: 461 MVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHR 520
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
A KL + G+ ++ +A+ GL SG A KI
Sbjct: 521 NEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKI 562
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 193/391 (49%), Gaps = 7/391 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCL 76
+ RM+E+GI P + T+N L+ G NS+ S + + E++E G I PDV SYN+++
Sbjct: 212 VWRRMKESGIEPSLYTFNFLLNGLV-NSMFIESAERVFEVMECGKIGPDVVSYNTMIKGY 270
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ G +A F DM +L P T+ ++ D+ L +++ +++ G
Sbjct: 271 CKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPP 330
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
Y+++I GLCK GR + + + G N YT ++ +N + +
Sbjct: 331 HAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFER 390
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
MK +G+ D Y ++ K GRL EA +Y E + V ++ + Y++LI+ K G+
Sbjct: 391 MKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGR 450
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
++ A +EM ++G D Y + LID L K+G ++ A + + M K G D + Y
Sbjct: 451 VDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTI 510
Query: 317 IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++ L K+ + + A+ +++ M K + ++ ++ LC + ++ A K+L G
Sbjct: 511 LISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMG 570
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
V I ++A + +++ L +G +A K+ I
Sbjct: 571 V-IPETAFEDMINVLCKAGRTEQACKLADGI 600
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 178/407 (43%), Gaps = 4/407 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L++ + ++ + M I PDVV+YN++I G + +++ +M +
Sbjct: 230 FLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKR 289
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD +Y +L+ + G D ++Q+M L +++++ GLCK+ T
Sbjct: 290 NLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEG 349
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + K G + Y LI K G + A + + + G P+ +TY I+
Sbjct: 350 SSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNG 409
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ + +E K + Y ++I K GR+ EA + E+MV G D
Sbjct: 410 LCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQD 469
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
YN LI+ K GK+E A +L MEK+G + YT+TILI GL K + A +
Sbjct: 470 SYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWD 529
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE---SMEVKDSFTYSSMVHNLCKAKR 357
M G ++ + L GK+ A + + M V + M++ LCKA R
Sbjct: 530 LMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVIPETAFEDMINVLCKAGR 589
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI-QSKI 403
A KL + G + + +++ LR +G A K+ SKI
Sbjct: 590 TEQACKLADGIVDRGREVPGRVRTILINALRKAGNADLAMKLMHSKI 636
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 140/308 (45%), Gaps = 1/308 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I C+ G ++ M + G +V Y +LI +N ++ +++L + M
Sbjct: 335 LVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGE 394
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD +Y +++ L + G+ DEA F+ ++ ++ +++GL K D A
Sbjct: 395 GFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEA 454
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ F + + G + YN LI L K+G++ A + K + G TYT ++
Sbjct: 455 EKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISG 514
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+ + + L++ M KG T + + G++ A ++++ GV +
Sbjct: 515 LFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGV-IP 573
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++ +IN+ CK G+ E A L D + +G E TILI+ L KAGN A +
Sbjct: 574 ETAFEDMINVLCKAGRTEQACKLADGIVDRGREVPGRVRTILINALRKAGNADLAMKLMH 633
Query: 301 YMNKIGFD 308
IG+D
Sbjct: 634 SKIGIGYD 641
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 4/216 (1%)
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
I K KG+ F ++I +F +G ++E +M G++ + ++N L+N
Sbjct: 177 IFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLV 236
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
+E+A + + ME D ++ +I G CKAGN K A M K + +
Sbjct: 237 NSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKI 296
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 368
Y ++ +G D +++++ ME + YS ++ LCK R S + +
Sbjct: 297 TYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENM 356
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
K G + + A++D +G EA + +++
Sbjct: 357 NKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMK 392
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 202/406 (49%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ C+ FD + M + ++PDV ++N LI G R + ++ EM
Sbjct: 233 VLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRY 292
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV S++ L+ + G+ D A ++M L P + +++ G C+ AL
Sbjct: 293 VTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEAL 352
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + G +P++VTYN L+ GLCK RL A +L E+ + G P+ T+TT++
Sbjct: 353 RVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGY 412
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R ++ L++ + R+ D Y ++I + G L +A + + M + +
Sbjct: 413 CRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNH 472
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y+ LI+ +C++G++E A+ LDEM K+G + T+ +I G C++GN+K + L+
Sbjct: 473 ITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQK 532
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M + +L +N ++ K+ + A NVF ME + D+ TY+ +++ +
Sbjct: 533 MRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGN 592
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ A ++ SG+ + ++++G +G ++A ++ ++
Sbjct: 593 MQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEM 638
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 182/369 (49%), Gaps = 4/369 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ +YC+ + FD T+++ M + + PDVVT+N LI R + ++ L+D M
Sbjct: 162 IMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANR 221
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P + +YNS++ L + + D+A VF+ M + P +FNI++ G C+ A
Sbjct: 222 GLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEA 281
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ ++ +Q P++V+++ LI + G + A L+E+ G P+ + YT ++
Sbjct: 282 VKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGG 341
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R L + M G D Y T++ K RL +A + +M GV D
Sbjct: 342 FCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPD 401
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ ++ TLI+ YC++G E A L D + +Q D T+ LIDG+C+ G++ A +
Sbjct: 402 LCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWD 461
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAK 356
M+ N Y+ ++D + G+++ A + M K + TY+S++ C++
Sbjct: 462 DMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSG 521
Query: 357 RLPSASKLL 365
+ + L
Sbjct: 522 NVKKGQQFL 530
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 198/403 (49%), Gaps = 4/403 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDA + DA +++ M G+ P +VTYNS++ G ++ + ++ M +
Sbjct: 197 VLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQC 256
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PDV S+N L+ ++G+ EA + +++M +TP +F+ ++ + D+A
Sbjct: 257 SVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHA 316
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R ++ G VP+ V Y ++I G C+AG + A + E+ G P+ +TY T++
Sbjct: 317 GAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNG 376
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + ++L+ M+ +G T D + T+I + + G + A + ++ ++ D
Sbjct: 377 LCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPD 436
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YN+LI+ C++G L A L D+M + + T++ILID C+ G ++ A L+
Sbjct: 437 VVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLD 496
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAK 356
M K G N+ YN I+ + G + + M + F T+++++H K +
Sbjct: 497 EMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEE 556
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ A + K VR +++G G ++A ++
Sbjct: 557 NMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRV 599
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 161/308 (52%), Gaps = 2/308 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M+I +C+ S + + M G PDVVTYN+L+ G + L + LL+EM E
Sbjct: 337 MVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEER 396
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD+ ++ +L+H + G + A ++F ++ L P T+N +++G+C+ A
Sbjct: 397 GVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKA 456
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + +P +TY+ILI C+ G++ A L E+ G+ PN TY +I+K
Sbjct: 457 NELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKG 516
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R+ K G + L M++ D + T+I ++K + A + M + V+ D
Sbjct: 517 YCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPD 576
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
V+YN +IN + ++G ++ A + M G E D+YT+ LI+G AGN K A +LH
Sbjct: 577 AVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHD 636
Query: 300 EYMNKIGF 307
E +++ GF
Sbjct: 637 EMIHR-GF 643
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 191/395 (48%), Gaps = 4/395 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
I++ + + +P ++ LI T++ + + +L+ +P + N+L+ L
Sbjct: 74 IVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLS 133
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G P A ++ ++ D T NIM++ CK D A + ++K P++V
Sbjct: 134 RAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVV 193
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T+N+LI +AG + A ++ + + G P +TY +++K ++R++ E+ M
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTM 253
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ D + +I F ++G +KEA + ++M V D+VS++ LI L+ + G++
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEM 313
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A L EM+ G D +T++I G C+AG++ A + M G ++ YN +
Sbjct: 314 DHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTL 373
Query: 318 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
++ L K ++ A + ME + D T+++++H C+ +A +L + L+ +
Sbjct: 374 LNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRL 433
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
R +++DG+ G +A ++ + +I
Sbjct: 434 RPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREI 468
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 139/274 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ +LN M E G++PD+ T+ +LI G R +L L D +L
Sbjct: 373 LLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQR 432
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +YNSL+ + + G +AN ++ DM ++ P T++I+++ C+ ++A
Sbjct: 433 LRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAF 492
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ K G +P + TYN +IKG C++G ++ + L+++ P+ IT+ T++
Sbjct: 493 GFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGY 552
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + M+++ D Y +I F + G +++A + M G++ D
Sbjct: 553 IKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDR 612
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
+Y +LIN + G + A+ L DEM +GF D
Sbjct: 613 YTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 86/170 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID++C+ + + L+ M + G P++ TYNS+I G R+ + L +M +
Sbjct: 477 ILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQD 536
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+ ++N+L+H + A VF M + P T+N+++NG + +A
Sbjct: 537 NVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDA 596
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
R+F+G+ G P+ TY LI G AG + A + E+ G AP+
Sbjct: 597 GRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646
>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 187/387 (48%), Gaps = 5/387 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
+++ + GI DV Y+SL+ G + S +L ++ EM E + DV +YN+L L
Sbjct: 502 SLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGL 561
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+LGK E VF MI LTP T+N ++N T+NAL + ++ +G +P +
Sbjct: 562 LRLGKY-EPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNM 620
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
VTYNILI GLCK G + +L E+ G+ P I + ++K R+RK L+I
Sbjct: 621 VTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKK 680
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
+ G + Y T+I ++G K+A + +MV G+ DIV+YN LI YC
Sbjct: 681 LVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSH 740
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+E A+ +M G + T+ L++GL G ++ A + M + G N YN
Sbjct: 741 VEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNI 800
Query: 317 IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
+V G+ G +I ++ M K + TY+ ++ + KA ++ A +LL L G
Sbjct: 801 LVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRG 860
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKI 399
S ++ G C+ E ++
Sbjct: 861 RIPNSSTYDVLICGWCKLSCQPEMDRL 887
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 193/407 (47%), Gaps = 5/407 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D +C+ + T+L +M + + P+VVT++S+I G + +L+ ++++L +M++M
Sbjct: 382 LLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMN 441
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V+ Y L+ F+ G+ + A +++M L F+I+LN L ++ A
Sbjct: 442 IMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQ 501
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G ++ Y+ L+ G K G A +++E+ + + + Y + K
Sbjct: 502 SLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGL 561
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R KY+ + S M G T D Y +V+ + G+ + A D + +M + GV ++
Sbjct: 562 LRLGKYEPK-SVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNM 620
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN LI CK G +E +L EM G+ H L+ ++ +
Sbjct: 621 VTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKK 680
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
+ +G + N YN ++ L + G A V M +K D TY++++ C
Sbjct: 681 LVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSH 740
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A L SG+ + A+++GL +G R+A K+ S++R
Sbjct: 741 VEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMR 787
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 202/424 (47%), Gaps = 25/424 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ YCQ I+ + G+ D + N+L+ G L+S +LDL+++ +
Sbjct: 115 ILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKN 174
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-------------CG--------DLTP 99
G+ PD+ +YN+L++ + G +A V +++ CG DL P
Sbjct: 175 GVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQP 234
Query: 100 CTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL 159
T+ ++ CK+R D+ ++ + G +P++VT + ++ GLC+ G+L A +L
Sbjct: 235 TVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLL 294
Query: 160 KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 219
+E+ + G PN ++YTTI+ ++ + S M +G + D T++ K
Sbjct: 295 REMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKA 354
Query: 220 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
G+ KEA + + ++ + + V+Y L++ +CK G +E A +L +MEK+ + T
Sbjct: 355 GKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTF 414
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
+ +I+G K G + A L M ++ N+ Y ++D + G+ + A ++ M+
Sbjct: 415 SSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKS 474
Query: 340 ----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
+++ + +++NL ++ + A L+ L G+ + +++DG G
Sbjct: 475 WGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESA 534
Query: 396 AKKI 399
A +
Sbjct: 535 ALSV 538
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 190/410 (46%), Gaps = 40/410 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI AYC+ D +++ +M +G+ PDVVT +S++ G R+ L+ + LL EM MG
Sbjct: 242 LIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMG 301
Query: 62 IPPDVWSY-----------------------------------NSLMHCLFQLGKPDEAN 86
+ P+ SY ++M LF+ GK EA
Sbjct: 302 LDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAE 361
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+FQ ++ +L P T+ +L+G CK + A + + ++K +P +VT++ +I G
Sbjct: 362 EMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGY 421
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
K G L A +L+++ PN Y ++ FR +++ MK G +
Sbjct: 422 AKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENN 481
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ ++ + G +KEA ++ +++ G+ LD+ +Y++L++ Y KEG AA ++ E
Sbjct: 482 IIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQE 541
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M ++ + D + L GL + G + + M ++G + YN +++ GK
Sbjct: 542 MTEKDMQFDVVAYNALTKGLLRLGKYEPKSV-FSRMIELGLTPDCVTYNSVMNTYFIQGK 600
Query: 327 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++A+++ M+ + + TY+ ++ LCK + +L L G
Sbjct: 601 TENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVG 650
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 191/427 (44%), Gaps = 25/427 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ +C+ D G+ +L+ M + G+ D VT N L+ G + L+ + ++ ++ G
Sbjct: 81 VVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLVGGG 140
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN------R 115
+P D N+L+ ++G A + +D + P T+N ++N CK
Sbjct: 141 VPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAE 200
Query: 116 YTDNALRMFRGLQKHGFV---------------PELVTYNILIKGLCKAGRLRTARWILK 160
N + FR + G + P +VT+ LI CK + + +
Sbjct: 201 SVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYE 260
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
++ SG P+ +T ++I+ R+ K +L M G + Y T+I+A +K G
Sbjct: 261 QMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSG 320
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
R+ EA ++ QMV G+ +D+V T+++ K GK + A + + K + T+T
Sbjct: 321 RVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYT 380
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 338
L+DG CK G+++ A L+ M K N+ ++ I++ K G ++ A+ V M
Sbjct: 381 ALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQM 440
Query: 339 --VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ + F Y+ ++ + + +A+ G+ +++ L+ SG +EA
Sbjct: 441 NIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEA 500
Query: 397 KKIQSKI 403
+ + I
Sbjct: 501 QSLIKDI 507
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 167/379 (44%), Gaps = 40/379 (10%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
MR + P + +N L+ + +S L EM+ G+ P+V+S N L+H L ++G
Sbjct: 1 MRALSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGD 60
Query: 82 PDEA-----NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
A N VF + T+N ++ G CK D + + K G +
Sbjct: 61 LGLALGYLRNSVFDHV----------TYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDS 110
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
VT NIL+KG C+ G ++ A WI+ L G +AI T++ L+++
Sbjct: 111 VTCNILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVED 170
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV------------------TDG-- 236
+ G D Y T++ AF K G L +A + +++ DG
Sbjct: 171 GWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLR 230
Query: 237 -VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
+Q +V++ TLI YCK ++ + L ++M G D T + ++ GLC+ G + A
Sbjct: 231 DLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEA 290
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 351
+ L M +G D N +Y I+ L K G++ A N M V+ D ++M+
Sbjct: 291 AMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDG 350
Query: 352 LCKAKRLPSASKLLLSCLK 370
L KA + A ++ + LK
Sbjct: 351 LFKAGKSKEAEEMFQTILK 369
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 169/392 (43%), Gaps = 25/392 (6%)
Query: 30 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 89
D VTYN+++ G + L LL EM++ G+ D + N L+ Q+G A +
Sbjct: 74 DHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIM 133
Query: 90 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
+++ G + N +++G C+ AL + K+G P++VTYN L+ CK
Sbjct: 134 GNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKR 193
Query: 150 GRLRTARWILKE------------LGDSG---------HAPNAITYTTIMKCCFRNRKYK 188
G L A ++ E L D G P +T+TT++ ++R
Sbjct: 194 GDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGID 253
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
+ M G D +++ + G+L EA + +M G+ + VSY T+I
Sbjct: 254 DFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTII 313
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
+ K G++ A+ +M +G D T ++DGL KAG K A + + K+
Sbjct: 314 SALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLV 373
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 364
N Y ++D K G ++ A V + ME + + T+SS+++ K L A ++
Sbjct: 374 PNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEV 433
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
L ++ + ++DG +G A
Sbjct: 434 LRKMVQMNIMPNVFVYAILLDGYFRTGQHEAA 465
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI YC + + ++M +GISP++ TYN+L+ G + N L+ + L+ EM E G
Sbjct: 731 LIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERG 790
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +YN L+ ++G ++ +++ +MI P T T+N+++ K A
Sbjct: 791 LVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQAR 850
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAG------RL------RTARWILKELGDSGHAP 169
+ + G +P TY++LI G CK RL A+ +L+E+ + GH P
Sbjct: 851 ELLNEMLTRGRIPNSSTYDVLICGWCKLSCQPEMDRLLKLSYQNEAKKLLREMCEKGHVP 910
Query: 170 NAITYTTI 177
+ T I
Sbjct: 911 SESTLMYI 918
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 104/218 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ AY + DA I ++ + G++ + + YN+LI R + + +L EM+ G
Sbjct: 661 LLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKG 720
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I D+ +YN+L+ ++A + M+ ++P T+N +L GL N +A
Sbjct: 721 ISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDAD 780
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ +++ G VP TYNIL+ G + G R + + E+ G P TY +++
Sbjct: 781 KLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDY 840
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 219
+ K + E+L+ M +G + Y +I + K+
Sbjct: 841 AKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCKL 878
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 12/157 (7%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+++ MRE G+ P+ TYN L++G R S+ L EM+ G P +YN L+
Sbjct: 782 LVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYA 841
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK-------NR-----YTDNALRMFR 125
+ GK +A + +M+ P ++T+++++ G CK +R Y + A ++ R
Sbjct: 842 KAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCKLSCQPEMDRLLKLSYQNEAKKLLR 901
Query: 126 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
+ + G VP T + G+ A+ +LK +
Sbjct: 902 EMCEKGHVPSESTLMYISSNFSAPGKRDDAKRLLKTV 938
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 194/403 (48%), Gaps = 16/403 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ + ++ +M+EAG +PD+VTYNSLI G + LL + + ++M +
Sbjct: 61 IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 120
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV +YN+L++C + + +A +M L P T++ ++ CK A
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ F +++ P TY LI CKAG L A +++E+ +G N +TYT ++
Sbjct: 181 IKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDG 240
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K E+ AM G + Y ++ F+K ++ A D +++M ++ D
Sbjct: 241 LCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPD 300
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++ Y T++ C E +LE A LL+ E+++ G + +T L+D K+G A LE
Sbjct: 301 LLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLE 360
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M +VD L K+ + A +F+ M K D Y++++ K
Sbjct: 361 EMLD------------LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHG 408
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L A L ++ G+ + A A++ GL HSG ++A+ +
Sbjct: 409 NLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNL 451
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 169/345 (48%), Gaps = 4/345 (1%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
+M + + P S N+L+H L ++G+ D + + F+DM + T+NIM++ LCK
Sbjct: 11 KMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEG 70
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
+ A +F +++ GF P++VTYN LI G K G L I +++ D+ P+ ITY
Sbjct: 71 DLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYN 130
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
++ C + + E L MK G + Y T I AF K G L+EA + M
Sbjct: 131 ALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRV 190
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
+ + +Y +LI+ CK G L A L++E+ + G + + T+T L+DGLC+ G +K A
Sbjct: 191 ALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEA 250
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 351
M G N E Y +V K ++++A ++ + M+ K D Y +++
Sbjct: 251 EEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWG 310
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
LC RL A L+ +SG+ ++D SG EA
Sbjct: 311 LCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEA 355
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 176/391 (45%), Gaps = 8/391 (2%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D M AGI V TYN +I + L + L +M E G PD+ +YNSL
Sbjct: 38 DLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSL 97
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ +LG DE +F+ M D P T+N ++N CK A ++ +G
Sbjct: 98 IDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGL 157
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P +VTY+ I CK G L+ A ++ PN TYT+++ + L+
Sbjct: 158 KPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALK 217
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
++ + + G + Y ++ + GR+KEA + M+ GV + +Y L++ +
Sbjct: 218 LVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFI 277
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K ++E A +L EM+++ + D + ++ GLC ++ A+L + + + G ++N
Sbjct: 278 KAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAV 337
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
Y ++D K G+ A+ + E M +V LCK A KL L G
Sbjct: 338 IYTTLMDAYFKSGQATEALTLLEEM--------LDLVDGLCKNNCFEVAKKLFDEMLDKG 389
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ K A A++DG G +EA ++ ++
Sbjct: 390 MMPDKIAYTALIDGNMKHGNLQEALNLRDRM 420
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 164/336 (48%), Gaps = 12/336 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
IDA+C+ MR ++P+ TY SLI + L+ +L L++E+L+ G
Sbjct: 167 FIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAG 226
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I +V +Y +L+ L + G+ EA VF+ M+ + P T+ +++G K + + A
Sbjct: 227 IKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAK 286
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +++ P+L+ Y ++ GLC RL A+ ++ E+ +SG NA+ YTT+M
Sbjct: 287 DILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAY 346
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F++ + L +L M ++ K + A ++M+ G+ D
Sbjct: 347 FKSGQATEALTLLEEM------------LDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDK 394
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y LI+ K G L+ A L D M + G E D + +T LI GL +G ++ AR L+
Sbjct: 395 IAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDE 454
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M G + Y C++ + GK+D A+ + M
Sbjct: 455 MIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEM 490
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 150/292 (51%), Gaps = 14/292 (4%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
+EA+ F M + P + N +L+ L K D + + F+ + G + TYNI+
Sbjct: 3 EEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIM 62
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE-----ILSAM 197
I LCK G L AR + ++ ++G P+ +TY +++ + KLGL I M
Sbjct: 63 IDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLI-----DGHGKLGLLDECICIFEQM 117
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K D Y +I F K R+ +A +++ +M +G++ ++V+Y+T I+ +CKEG L
Sbjct: 118 KDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGML 177
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A +M + +++T+T LID CKAGN+ A +E + + G N+ Y +
Sbjct: 178 QEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTAL 237
Query: 318 VDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 365
+D L ++G++ A VF +M + TY+++VH KAK + A +L
Sbjct: 238 LDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDIL 289
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 136/291 (46%), Gaps = 4/291 (1%)
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
+ A F ++K P+ + N L+ L K GR +R K++G +G + TY +
Sbjct: 3 EEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIM 62
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + ++ + + MK G+T D Y ++I K+G L E EQM
Sbjct: 63 IDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADC 122
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
D+++YN LIN +CK ++ A+ L EM+ G + + T++ ID CK G ++ A
Sbjct: 123 DPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIK 182
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVK-DSFTYSSMVHNLC 353
M ++ N Y ++D K G + A+ + E + +K + TY++++ LC
Sbjct: 183 FFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLC 242
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ R+ A ++ + L +GV + A+V G + AK I +++
Sbjct: 243 EEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMK 293
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 127/293 (43%), Gaps = 23/293 (7%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LIDA C+ + ++ + +AGI +VVTY +L+ G + + ++ ML G
Sbjct: 202 LIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAG 261
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +Y +L+H + + + A + ++M + P + +L GLC + A
Sbjct: 262 VAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAK 321
Query: 122 RMFRGLQKHGFVPELVTYNIL-----------------------IKGLCKAGRLRTARWI 158
+ +++ G V Y L + GLCK A+ +
Sbjct: 322 LLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKL 381
Query: 159 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 218
E+ D G P+ I YT ++ ++ + L + M G D Y +I
Sbjct: 382 FDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSH 441
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
G++++A + +++M+ GV D V Y LI Y GK++ A L +EM K+G
Sbjct: 442 SGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 494
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 180/370 (48%), Gaps = 34/370 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID +C+ D + +M GI+P V TYN LI G R + S +L+EM E G
Sbjct: 318 VIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENG 377
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V SY SL++CL + GK EA V +DM+ + P +N++++G C AL
Sbjct: 378 EKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREAL 437
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R F + K+G +VTYN LIKGLCK G+L+ A + + +GH P+ ITY +++
Sbjct: 438 RFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGY 497
Query: 182 FRNRKYKLGLEILSAMKRKGY-----TF-----------------------------DGF 207
+ LE+ MK+ G TF D
Sbjct: 498 SNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLSPDRV 557
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y +I + + G +++A ++MV GV+ D +YN+LI + KEGKL L+D+M
Sbjct: 558 VYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDM 617
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
+ +G + T+++LI G C + GA + M + GF N+ N + L KDG++
Sbjct: 618 KAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRL 677
Query: 328 DHAINVFESM 337
A ++ M
Sbjct: 678 QEAQSICSEM 687
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 192/401 (47%), Gaps = 5/401 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M++++ + FD + M G PD + Y + A + L +++L + M
Sbjct: 36 MIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRR 95
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P+V+ YN L+ L + + +A ++F +M +L P TFN +++G CK D A
Sbjct: 96 KVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVA 155
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + ++K P ++T+N L+ GLCKA R+ AR +L E+ +G P+ TY+ I
Sbjct: 156 IGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDG 215
Query: 181 CFRNRK-YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
++ L++ KG D + ++ K G++++A + ++ +V G+
Sbjct: 216 LLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVP 275
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
V YNT++N YC+ G ++ A L +++ME +G + +ID C+ I A +
Sbjct: 276 GEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWV 335
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ M G ++E YN ++D G+ + E ME + +Y S+++ LCK
Sbjct: 336 KKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKD 395
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
++ A +L + GV + ++DG G REA
Sbjct: 396 GKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREA 436
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 163/377 (43%), Gaps = 44/377 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ D + RM++ + P ++T+NSL++G + + + +L+E+ G
Sbjct: 142 LIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNG 201
Query: 62 IPPDVWSYNSLMHCLFQLGKPDE----ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
PD ++Y+ + L K D+ A ++++ I + T +I+LNGLCK
Sbjct: 202 FVPDGFTYSIIFDGLL---KSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKV 258
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL------------------------- 152
+ A + + L +HG VP V YN ++ G C+ G +
Sbjct: 259 EKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSV 318
Query: 153 -----------RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
+ W+ K +G G AP+ TY ++ R + +IL M+ G
Sbjct: 319 IDKFCEMQMIDKAEEWVKKMVG-KGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENG 377
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ Y ++I K G++ EA + MV GV + YN LI+ C GKL A
Sbjct: 378 EKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREAL 437
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
DEM K G T+ LI GLCK G +K A + G ++ YN ++
Sbjct: 438 RFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGY 497
Query: 322 GKDGKIDHAINVFESME 338
G + ++E+M+
Sbjct: 498 SNAGNSQKCLELYETMK 514
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 170/369 (46%), Gaps = 5/369 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ C+ + +L + E G+ P V YN+++ G + + ++ +++M
Sbjct: 247 ILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESR 306
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ ++NS++ ++ D+A + M+ + P T+NI+++G +
Sbjct: 307 GLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRC 366
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ ++++G P +++Y LI LCK G++ A +L+++ G PNA Y ++
Sbjct: 367 FQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDG 426
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K + L M + G Y ++I K+G+LKEA + + + G D
Sbjct: 427 SCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPD 486
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++YN+LI+ Y G + L + M+K G + T LI G K G IK
Sbjct: 487 VITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG-IKLKETLFN 545
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
M ++ + YN ++ + G + A ++ + M D+ TY+S++ K
Sbjct: 546 EMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEG 605
Query: 357 RLPSASKLL 365
+L L+
Sbjct: 606 KLSETKDLV 614
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 138/286 (48%), Gaps = 6/286 (2%)
Query: 107 MLNGLC-KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
ML +C +++ ++ +++ G +P ++++ L ++ + + KE+
Sbjct: 1 MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
G P+ + Y M + KL +E+ MKR+ + F Y +I K R+++A
Sbjct: 61 GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+M + + V++NTLI+ YCK G+++ A L + M+K+ E T L+ G
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSG 180
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK-DGKIDHAINVFESMEVK---- 340
LCKA I+ AR L + GF + Y+ I D L K D A++++ K
Sbjct: 181 LCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKI 240
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
D++T S +++ LCK ++ A ++L S ++ G+ + +V+G
Sbjct: 241 DNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNG 286
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 117/273 (42%), Gaps = 1/273 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLID C + M + GI +VTYNSLI G + L + ++ +
Sbjct: 422 MLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITST 481
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +YNSL+ G + +++ M L P TF+ +++G C
Sbjct: 482 GHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISG-CSKEGIKLK 540
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + + P+ V YN +I + G ++ A + KE+ D G P+ TY +++
Sbjct: 541 ETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILG 600
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K +++ MK KG + Y +I + A + +M+ +G +
Sbjct: 601 HLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPN 660
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ N L K+G+L+ A + EM G +
Sbjct: 661 VCICNELSTGLRKDGRLQEAQSICSEMIANGMD 693
>gi|255569835|ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534795|gb|EEF36485.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 913
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 171/366 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L+++ + D + +++ G+SP+ TY +I N L ++ ++ EM E
Sbjct: 203 FLMNSLIKNSKLDMALAVYKQLKRLGLSPNDYTYAIVIKALCINGSLEEAMYVIKEMEES 262
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P ++Y + + L D +V Q ++ + + + G C D A
Sbjct: 263 GITPTGFAYTAYIEGLCVNEMSDLGYQVLQAWKGANIPLDMYAYTVAVRGFCNELKFDKA 322
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ R ++K G VP++ Y LI CKAG L A L E+ G N + +I+ C
Sbjct: 323 ESVLRDMEKEGMVPDMHCYTALICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHC 382
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ + K G DG Y V+ A K+G+L+EA +++M + +D
Sbjct: 383 LCELGMHSEVVDQFNQFKSLGLFLDGVSYNNVVDALCKLGKLEEAITLLDEMKMKQINMD 442
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++ Y TLIN YC +G + A+ + +EM + G E D T+ +L+ G C+ G A L+
Sbjct: 443 VMHYTTLINGYCCQGNVVDAFKVFEEMRENGIEIDVVTYDVLVSGFCRNGLATEALNLLD 502
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPS 360
YM N YN +V+ L GK+ A VF S+E K Y +M++ CKA
Sbjct: 503 YMQTQKLKPNSITYNVVVESLCMGGKVKEAEAVFNSIEDKSLDNYFAMINGYCKANHTAG 562
Query: 361 ASKLLL 366
A+KL
Sbjct: 563 AAKLFF 568
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 182/428 (42%), Gaps = 33/428 (7%)
Query: 14 AGYTILNRMREAGISPDVVTYNSLIA----GATRNSLLSCSLDLL-------DEMLEMGI 62
+ + N+++++G D+ TY ++I L S LD++ D E+
Sbjct: 82 SALSFFNQLKDSGFKHDISTYAAIIRILCYWGLHKQLRSIFLDIIYVSCNDNDTPFEISH 141
Query: 63 PPDVWS------------------YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF 104
D S Y++L+ +G D+A V M P
Sbjct: 142 FLDTLSDGFVDVDSKKQSLFMSKVYDALVKAYVSVGMFDDAIDVLFQMGRRRFVPHIFIC 201
Query: 105 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 164
N ++N L KN D AL +++ L++ G P TY I+IK LC G L A +++KE+ +
Sbjct: 202 NFLMNSLIKNSKLDMALAVYKQLKRLGLSPNDYTYAIVIKALCINGSLEEAMYVIKEMEE 261
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
SG P YT ++ N LG ++L A K D + Y + F + +
Sbjct: 262 SGITPTGFAYTAYIEGLCVNEMSDLGYQVLQAWKGANIPLDMYAYTVAVRGFCNELKFDK 321
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A + M +G+ D+ Y LI +CK G L AY L+EM +G + + ++
Sbjct: 322 AESVLRDMEKEGMVPDMHCYTALICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILH 381
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 340
LC+ G +G + +YN +VD L K GK++ AI + + M++K
Sbjct: 382 CLCELGMHSEVVDQFNQFKSLGLFLDGVSYNNVVDALCKLGKLEEAITLLDEMKMKQINM 441
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 400
D Y+++++ C + A K+ ++G+ I +V G +G EA +
Sbjct: 442 DVMHYTTLINGYCCQGNVVDAFKVFEEMRENGIEIDVVTYDVLVSGFCRNGLATEALNLL 501
Query: 401 SKIRMAKI 408
++ K+
Sbjct: 502 DYMQTQKL 509
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 175/378 (46%), Gaps = 27/378 (7%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC + + + MRE GI DVVTY+ L++G RN L + +L+LLD M
Sbjct: 449 LINGYCCQGNVVDAFKVFEEMRENGIEIDVVTYDVLVSGFCRNGLATEALNLLDYMQTQK 508
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +YN ++ L GK EA VF + L + M+NG CK +T A
Sbjct: 509 LKPNSITYNVVVESLCMGGKVKEAEAVFNSIEDKSLD----NYFAMINGYCKANHTAGAA 564
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F L G V YN+L K LC+ G +L+ + + P+ Y +
Sbjct: 565 KLFFRLSVKGHVKRSCCYNLL-KNLCEEGDNDGILMLLETMLNLNVEPSKFIYGKLFTSL 623
Query: 182 FRN---RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
R + + + ++G+T D Y +I ++ ++ LKEA D M G++
Sbjct: 624 CRAGGAAGMRKAQSVFDMLLKRGWTPDLIAYTIMITSYCRMNCLKEAVDLFHDMKQRGIK 683
Query: 239 LDIVSYNTLINLYCK---------------EGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
D+V++ L++ + K + A + EM+ + D +T+LI
Sbjct: 684 PDLVTFTVLLDGHHKAHIKKVYSAANAKGGNEDIFDALAIWTEMKDTEIKPDVIFYTVLI 743
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
DG CK ++ A + M + G + ++ Y ++ + G +D A+N+ + M +K
Sbjct: 744 DGYCKVDSLHDAIGVFDEMIERGLEPDIITYTALLSGCCQRGDVDRAVNLLDQMSLKGIS 803
Query: 341 -DSFTYSSMVHNLCKAKR 357
D+ T S+++H + K ++
Sbjct: 804 PDTRTMSALLHGILKTRQ 821
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 109/242 (45%), Gaps = 29/242 (11%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + + + G +PD++ Y +I R + L ++DL +M + GI PD+ ++ L+
Sbjct: 637 SVFDMLLKRGWTPDLIAYTIMITSYCRMNCLKEAVDLFHDMKQRGIKPDLVTFTVLLDGH 696
Query: 77 FQL-------------GKPD--EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ G D +A ++ +M ++ P + ++++G CK +A+
Sbjct: 697 HKAHIKKVYSAANAKGGNEDIFDALAIWTEMKDTEIKPDVIFYTVLIDGYCKVDSLHDAI 756
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + + G P+++TY L+ G C+ G + A +L ++ G +P+ T + ++
Sbjct: 757 GVFDEMIERGLEPDIITYTALLSGCCQRGDVDRAVNLLDQMSLKGISPDTRTMSALLHGI 816
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFG------YCTVIAAFVKIGRLKEATDYMEQMVTD 235
+ R+ SA + Y FDG+ +C ++ A G + + + D
Sbjct: 817 LKTRQ-------CSAPQCLKY-FDGYSLSICHIFCRIVQACYITGSIPSELENLSNFNLD 868
Query: 236 GV 237
V
Sbjct: 869 DV 870
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID YC+ S + + M E G+ PD++TY +L++G + + +++LLD+M
Sbjct: 741 VLIDGYCKVDSLHDAIGVFDEMIERGLEPDIITYTALLSGCCQRGDVDRAVNLLDQMSLK 800
Query: 61 GIPPDVWSYNSLMHCLFQ 78
GI PD + ++L+H + +
Sbjct: 801 GISPDTRTMSALLHGILK 818
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 197/443 (44%), Gaps = 41/443 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI AY + + ++N M G SP V TYN++I G ++ + ++ EML G
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y SL+ + G E +VF DM D+ P F+ M++ ++ D AL
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F +++ G +P+ V Y ILI+G C+ G + A + E+ G A + +TY TI+
Sbjct: 396 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL 455
Query: 182 FRNRKY------------------------------KLG-----LEILSAMKRKGYTFDG 206
+ + KLG +E+ MK K D
Sbjct: 456 CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDV 515
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T++ F K+G + A + MV+ + +SY+ L+N C +G L A+ + DE
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE 575
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M + + +I G C++GN LE M GF + +YN ++ ++
Sbjct: 576 MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREEN 635
Query: 327 IDHAINVFESME------VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
+ A + + ME V D FTY+S++H C+ ++ A +L ++ GV +S
Sbjct: 636 MSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTY 695
Query: 381 KAVVDGLRHSGCRREAKKIQSKI 403
+++G EA +I ++
Sbjct: 696 TCMINGFVSQDNLTEAFRIHDEM 718
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 187/406 (46%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + + + + + + +G+ +V T N ++ ++ + L ++ E G
Sbjct: 206 LIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKG 265
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ +YN+L+ G +EA + M +P T+N ++NGLCK+ + A
Sbjct: 266 VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAK 325
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + + G P+ TY L+ CK G + + ++ P+ + ++++M
Sbjct: 326 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLF 385
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ L +++K G D Y +I + + G + A + +M+ G +D+
Sbjct: 386 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDV 445
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNT+++ CK L A L +EM ++ D YT TILIDG CK GN++ A +
Sbjct: 446 VTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQK 505
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKR 357
M + ++ YN ++D GK G ID A ++ M K+ +YS +V+ LC
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGH 565
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L A ++ + ++ +++ G SG + + K+
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 169/339 (49%), Gaps = 41/339 (12%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
+ D N ++EAG+ PD V Y LI G R ++S +++L +EML+ G DV +YN
Sbjct: 390 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+++H L + EA+++F +M L P + T I+++G CK NA+ +F+ +++
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT--------------- 175
++VTYN L+ G K G + TA+ I ++ P I+Y+
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569
Query: 176 --------------TIMKC-------CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
T+M C C R+ G L M +G+ D Y T+I
Sbjct: 570 FRVWDEMISKNIKPTVMICNSMIKGYC-RSGNASDGESFLEKMISEGFVPDCISYNTLIY 628
Query: 215 AFVKIGRLKEATDYMEQMVTD--GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
FV+ + +A +++M + G+ D+ +YN++++ +C++ +++ A ++L +M ++G
Sbjct: 629 GFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGV 688
Query: 273 ECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSN 310
D+ T+T +I+G N+ A R+H E + + GF +
Sbjct: 689 NPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR-GFSPD 726
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 126/277 (45%), Gaps = 37/277 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID +C+ + + +M+E I DVVTYN+L+ G + + + ++ +M+
Sbjct: 485 ILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK 544
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P SY+ L++ L G EA RV+ +MI ++ P N M+ G C++ +
Sbjct: 545 EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDG 604
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS--GHAPNAITYTTIM 178
+ GFVP+ ++YN LI G + + A ++K++ + G P+ TY +I+
Sbjct: 605 ESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSIL 664
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
G+C + ++KEA + +M+ GV
Sbjct: 665 H----------------------------GFC-------RQNQMKEAEVVLRKMIERGVN 689
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
D +Y +IN + + L A+ + DEM ++GF D
Sbjct: 690 PDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 137/301 (45%), Gaps = 4/301 (1%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
++ L+ Q K EA+ F + T N ++ L + + + A +++ +
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
+ G + T NI++ LCK G++ L ++ + G P+ +TY T++ +
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
E+++AM KG++ + Y TVI K G+ + A + +M+ G+ D +Y +L+
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
CK+G + + +M + D + ++ ++GN+ A ++ + + G
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
+ Y ++ + G I A+N+ M + D TY++++H LCK K L A KL
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 365 L 365
Sbjct: 468 F 468
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 130/298 (43%), Gaps = 8/298 (2%)
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
+ F++++ + R A F L+ GF + N LI L + G + A + +E
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 225
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ SG N T ++ ++ K + LS ++ KG D Y T+I+A+ G
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
++EA + M M G + +YNT+IN CK GK E A + EM + G D T+
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME--- 338
L+ CK G++ M +L ++ ++ + G +D A+ F S++
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 339 -VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
+ D+ Y+ ++ C+ + A L L+ G + ++ GL C+R+
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL----CKRK 459
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 4/200 (2%)
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
N + +++ + RK + E + ++ KG+T +I + V+IG ++ A
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
+++ GV +++ + N ++N CK+GK+E L +++++G D T+ LI
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTY 345
G ++ A + M GF + YN +++ L K GK + A VF M DS TY
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 346 SSMVHNLCKAKRLPSASKLL 365
S++ CK + K+
Sbjct: 344 RSLLMEACKKGDVVETEKVF 363
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 186/377 (49%), Gaps = 4/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I C+ + + +L +RE G SP+VV Y +LI G + + + DL EM +
Sbjct: 168 IVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKF 227
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + W+Y L+H LF+ G + +++ M + P T+N ++N LCK+ T +A
Sbjct: 228 GLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDA 287
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F +++ G +VTYN LI GLC+ + A ++ ++ PN ITY T++
Sbjct: 288 FKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDG 347
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K L + +K +G + Y +++ F + G A +++M G++
Sbjct: 348 FCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPS 407
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+Y LI+ + + +E A L ME+ G D +T+++LI G C G + A +
Sbjct: 408 KVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFK 467
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAK 356
M + + N YN ++ K+G A+ +F ME K+ +YS ++ LCK +
Sbjct: 468 SMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKER 527
Query: 357 RLPSASKLLLSCLKSGV 373
+L A L+ + SG+
Sbjct: 528 KLKEAEDLVEKMIDSGI 544
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 163/318 (51%), Gaps = 1/318 (0%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
G+ + +M+E G+ P++ TYN ++ ++ + + DEM E G+ ++ +YN+L+
Sbjct: 252 GFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIG 311
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
L + K +EAN+V M + P T+N +++G C AL + R L+ G P
Sbjct: 312 GLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSP 371
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
LVTYN+L+ G C+ G A ++KE+ + G P+ +TYT ++ R+ + +++
Sbjct: 372 SLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLR 431
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
S+M+ G D Y +I F G++ EA+ + MV ++ + V YNT+I YCKE
Sbjct: 432 SSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKE 491
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
G A L +ME++ + +++ LI LCK +K A +E M G D +
Sbjct: 492 GSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTIC 551
Query: 315 NCIVDRLGKDGKIDHAIN 332
N ++ R D + I+
Sbjct: 552 N-LISRAKTDSPVAQIID 568
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 182/392 (46%), Gaps = 38/392 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISP------------------------------- 29
++I+AY Q S D+ N M + G P
Sbjct: 99 VIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIK 158
Query: 30 ---DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
DV ++ +I G + S DLL E+ E G P+V Y +L+ + G+ ++A
Sbjct: 159 VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+F +M L T+ ++++GL KN M+ +Q+HG P L TYN ++ L
Sbjct: 219 DLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQL 278
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK GR + A + E+ + G + N +TY T++ R K +++ MK +
Sbjct: 279 CKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNL 338
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T+I F +G+L +A + + G+ +V+YN L++ +C++G A ++ E
Sbjct: 339 ITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKE 398
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
ME++G + K T+TILID ++ N++ A M ++G ++ Y+ ++ G+
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCK 354
++ A +F+SM K + Y++M+ CK
Sbjct: 459 MNEASRLFKSMVEKMLEPNEVIYNTMILGYCK 490
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 160/340 (47%), Gaps = 5/340 (1%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
Y +++ Q D + F +M+ P + FN +L + + + N F
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSS-SFNQWWCFFNES 155
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
K V ++ ++ I+IKG C+AG + + +L EL + G +PN + YTT++ C + + +
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
++ M + G + + Y +I K G K+ + E+M GV ++ +YN ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
N CK+G+ + A+ + DEM ++G C+ T+ LI GLC+ A ++ M +
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVIN 335
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
NL YN ++D GK+ A+++ ++ + TY+ +V C+ A+K+
Sbjct: 336 PNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKM 395
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ + G++ K ++D S A +++S +
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSME 435
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 94/170 (55%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ M E GI P VTY LI R+ + ++ L M E+
Sbjct: 378 VLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEEL 437
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV +Y+ L+H G+ +EA+R+F+ M+ L P +N M+ G CK + A
Sbjct: 438 GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRA 497
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
LR+FR +++ P + +Y+ LI+ LCK +L+ A +++++ DSG P+
Sbjct: 498 LRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPS 547
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 68/142 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID + + + + + + M E G+ PDV TY+ LI G ++ + L M+E
Sbjct: 413 ILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK 472
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P+ YN+++ + G A R+F+DM +L P A+++ ++ LCK R A
Sbjct: 473 MLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEA 532
Query: 121 LRMFRGLQKHGFVPELVTYNIL 142
+ + G P N++
Sbjct: 533 EDLVEKMIDSGIDPSDTICNLI 554
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 197/398 (49%), Gaps = 7/398 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE---MGIPPDVWSY 69
DA +L RM E PDV + L+ G + +L+LL M + G PDV SY
Sbjct: 140 DAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSY 199
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
++++ F+ G D+A + +M+ ++P T++ ++ LCK + D A+ + + K
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVK 259
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
+G +P +TYN ++ G C + + + A LK++ G P+ +TY ++M +N +
Sbjct: 260 NGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTE 319
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+I +M ++G D YCT++ + G L E ++ MV +G+ D +N LI
Sbjct: 320 ARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILIC 379
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
Y K+ K++ A L+ +M + G + T+ +I LCK+G++ A L+ E M G
Sbjct: 380 AYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTP 439
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
N+ Y ++ L K D A + M + ++ ++S++H+ CK R+ + KL
Sbjct: 440 NIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLF 499
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++ GV+ ++DG +G EA K+ S +
Sbjct: 500 DLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM 537
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 191/399 (47%), Gaps = 6/399 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ + + D Y+ + M + ISPDVVTY+S+IA + + ++++L M++ G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG 261
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +YNS++H +P EA + M + P T+N +++ LCKN + A
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR 321
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + K G P++ TY L++G G L +L + +G P+ + ++
Sbjct: 322 KIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAY 381
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + + S M++ G + Y VI K G + +A Y EQM+ +G+ +I
Sbjct: 382 AKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNI 441
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ Y +LI+ C K + A L+ EM +G + +I CK G + + +
Sbjct: 442 IVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDL 501
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
M +IG N+ Y+ ++D GK+D A + SM D TY+++++ C+ R
Sbjct: 502 MVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSR 561
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ A L + SGV ++ GL H+ RR A
Sbjct: 562 MDDALALFKEMVSSGVSPNIITYNIILQGLFHT--RRTA 598
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 190/402 (47%), Gaps = 4/402 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ YC L +MR G+ PDVVTYNSL+ +N + + + D M + G
Sbjct: 272 ILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRG 331
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ +Y +L+ G E + + M+ + P FNI++ K D A+
Sbjct: 332 LEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAM 391
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++HG P +VTY +I LCK+G + A +++ D G PN I YT+++
Sbjct: 392 LVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSL 451
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K+ E++ M +G + + ++I + K GR+ E+ + MV GV+ ++
Sbjct: 452 CIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNV 511
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y+TLI+ YC GK++ A LL M G + D T+ LI+G C+ + A +
Sbjct: 512 ITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKE 571
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHNLCKAKR 357
M G N+ YN I+ L + A + + +S + TY+ ++H LCK
Sbjct: 572 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNL 631
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
A ++ + + +++ ++ L G EAK +
Sbjct: 632 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 673
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 171/358 (47%), Gaps = 43/358 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI AY + D + ++MR+ G++P+VVTY ++I ++ + ++ ++M++
Sbjct: 376 ILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDE 435
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P++ Y SL+H L K D+A + +M+ + T FN +++ CK +
Sbjct: 436 GLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIES 495
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F + + G P ++TY+ LI G C AG++ A +L + G P+ +TY T++
Sbjct: 496 EKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLIN- 554
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
GYC ++ R+ +A ++MV+ GV +
Sbjct: 555 ---------------------------GYC-------RVSRMDDALALFKEMVSSGVSPN 580
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++YN ++ + AA L + K G + + T+ I++ GLCK N+ L +
Sbjct: 581 IITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCK-NNLTDEALRM- 638
Query: 301 YMNKIGFDSNLE--AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNL 352
+ N D LE +N ++ L K G+ D A ++F ++ V D TYS M NL
Sbjct: 639 FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 696
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 147/312 (47%), Gaps = 2/312 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + C F +D ++ M + GI + + +NS+I + + S L D M+ +G
Sbjct: 447 LIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIG 506
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V +Y++L+ GK DEA ++ M + P T+N ++NG C+ D+AL
Sbjct: 507 VKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDAL 566
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ + G P ++TYNI+++GL R A+ + + SG TY I+
Sbjct: 567 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGL 626
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N L + + + + +I A +K+GR EA D + +G+ D+
Sbjct: 627 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDV 686
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y+ + ++G LE L ME+ G + ++ L + G+I A +L
Sbjct: 687 RTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSM 746
Query: 302 MNKIGFDSNLEA 313
+++ F +LEA
Sbjct: 747 IDEKHF--SLEA 756
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 162/422 (38%), Gaps = 120/422 (28%)
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
G +TP T+ I++ C+ D + K GF E +T+ L+KGLC R
Sbjct: 81 GKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSD 140
Query: 155 ARWI--------------------LKELGDS-------------------GHAPNAITYT 175
A I LK L D G AP+ ++YT
Sbjct: 141 AMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYT 200
Query: 176 TIMKCCFR----NRKYKL-------------------------------GLEILSAMKRK 200
T++ F+ ++ Y +E+L+ M +
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKN 260
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G + Y +++ + + KEA ++++M +DGV+ D+V+YN+L++ CK G+ A
Sbjct: 261 GVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEA 320
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAG------------------------------ 290
+ D M K+G E D T+ L+ G G
Sbjct: 321 RKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICA 380
Query: 291 -----NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT- 344
+ A L M + G + N+ Y ++ L K G +D A+ FE M + + T
Sbjct: 381 YAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQM-IDEGLTP 439
Query: 345 ----YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 400
Y+S++H+LC + A +L+L L G+ + + + HS C +E + I+
Sbjct: 440 NIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICL----NTIFFNSIIHSHC-KEGRVIE 494
Query: 401 SK 402
S+
Sbjct: 495 SE 496
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 97/240 (40%), Gaps = 35/240 (14%)
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
P TY ++ CC R + LG L + +KG+ + + ++ R +A D
Sbjct: 85 PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144
Query: 229 MEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ---GFECDKYTHTILID 284
+ + +T+ D+ S L+ C E + + A LL M G D ++T +I+
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT 344
G K G+ D Y+ ++DR +I D T
Sbjct: 205 GFFKEGD---------------SDKAYSTYHEMLDR-----RIS-----------PDVVT 233
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
YSS++ LCK + + A ++L + +K+GV +++ G S +EA K+R
Sbjct: 234 YSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMR 293
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 173/357 (48%), Gaps = 9/357 (2%)
Query: 52 DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 111
+L MLEMG PP+V +Y + + L + +A V ++M+ L P T ++NGL
Sbjct: 241 ELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGL 300
Query: 112 CKNRYTDNALRMFRGLQKHG-FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
CK +T+ A R+F L K + P + TY ++I G CK G+L A +L + + G APN
Sbjct: 301 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPN 360
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
TYTT++ + + E+++ M+R+G+ + + Y +I K G+++EA +
Sbjct: 361 TNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLR 420
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
G+QLD V+Y +I +CK+G + A L + M + G D +T+T LI C+
Sbjct: 421 MANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQR 480
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 346
++ ++ + I + Y ++ K GK A+ VFE M DS TY
Sbjct: 481 QMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYG 540
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+++ LCK RL A L L R++ V + CRRE + I
Sbjct: 541 ALISGLCKESRLEEARALYEGMLDK--RLVPCEVTPVTLAFEY--CRREKAVVAVSI 593
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 158/338 (46%), Gaps = 1/338 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ +CQ F + RM E G P+VV Y + I G + + + + +L+EM+
Sbjct: 225 VIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAK 284
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDN 119
G+ P+V+++ SL++ L ++G + A R+F +I P T+ +M+ G CK
Sbjct: 285 GLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLAR 344
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + + + G P TY LI G CK G A ++ ++ G PN TY ++
Sbjct: 345 AEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALID 404
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ K + ++L +G D Y +I K G + A D +M +G
Sbjct: 405 GLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHP 464
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DI +Y TLI YC++ ++E + L D+ K T+T +I G CK G A
Sbjct: 465 DIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVF 524
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
E M + G ++ Y ++ L K+ +++ A ++E M
Sbjct: 525 ERMVQNGCQADSITYGALISGLCKESRLEEARALYEGM 562
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 172/367 (46%), Gaps = 5/367 (1%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G+ PD ++ +LI G R+ + LL M G D + ++ Q G+ +
Sbjct: 180 GLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDV 239
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+ +F+ M+ P + ++GLCK Y A + + G P + T+ LI G
Sbjct: 240 SELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLING 299
Query: 146 LCKAGRL-RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
LCK G R R LK + S + PN TYT ++ + K +L M +G
Sbjct: 300 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 359
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ Y T+I+ K G A + M +M +G Q +I +YN LI+ CK+GK++ AY +L
Sbjct: 360 NTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVL 419
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
QG + DK T+T++I CK G+I A M + G ++ Y ++ R +
Sbjct: 420 RMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQ 479
Query: 325 GKIDHAINVFE---SME-VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
+++ + +F+ ++E V TY+SM+ CK + SA ++ +++G +
Sbjct: 480 RQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITY 539
Query: 381 KAVVDGL 387
A++ GL
Sbjct: 540 GALISGL 546
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 167/391 (42%), Gaps = 41/391 (10%)
Query: 37 LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-G 95
++A L + D++ EM G+P V + N ++ G A +VF M+ G
Sbjct: 120 MVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRG 179
Query: 96 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 155
L P +F ++ G C++ + + +Q GF + T ++++ C+ GR R
Sbjct: 180 GLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDV 239
Query: 156 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-------------- 201
+ + + + G PN + YT + + K +L M KG
Sbjct: 240 SELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLING 299
Query: 202 ----------------------YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
Y + Y +I + K G+L A + +MV G+
Sbjct: 300 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 359
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ +Y TLI+ +CKEG A+ L+++M ++GF+ + YT+ LIDGLCK G I+ A L
Sbjct: 360 NTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVL 419
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKA 355
N G + Y ++ K G I +A+++F M D TY++++ C+
Sbjct: 420 RMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQ 479
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+++ + KL CL + K +++ G
Sbjct: 480 RQMEESQKLFDKCLAIELVPTKQTYTSMIAG 510
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 156/337 (46%), Gaps = 3/337 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I YC+ +L RM E G++P+ TY +LI+G + +C+ +L+++M
Sbjct: 331 VMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRRE 390
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P++++YN+L+ L + GK EA +V + L T+ +M+ CK + A
Sbjct: 391 GFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYA 450
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F + ++G P++ TY LI C+ ++ ++ + + P TYT+++
Sbjct: 451 LDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAG 510
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K L + M + G D Y +I+ K RL+EA E M+ +
Sbjct: 511 YCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPC 570
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+ TL YC+ K A +LD ++K+ +T +L+ L G+++ A L L+
Sbjct: 571 EVTPVTLAFEYCRREKAVVAVSILDRLDKRR---KNHTVNVLVRKLSAIGHVEDASLFLK 627
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
+ + AY ++ + K A + E +
Sbjct: 628 KALDVDLAVDRLAYTSFINSCYANKKYALATEISEKI 664
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 143/295 (48%), Gaps = 11/295 (3%)
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL-GDSGHAPNAITYTTI 177
A M ++ HG + T N +++ G AR + + G P+A ++ +
Sbjct: 132 EAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRGGLLPDARSFRAL 191
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA-AFVKIGRLKEATDYMEQMVTDG 236
+ C R+ + + +L+ M+ +G+ D CTVI F + GR ++ ++ +M+ G
Sbjct: 192 IVGCCRDGRMEEVDALLTVMQGQGFCLDN-ATCTVIVRVFCQKGRFRDVSELFRRMLEMG 250
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA- 295
++V+Y I+ CK ++ A+ +L+EM +G + + YTHT LI+GLCK G + A
Sbjct: 251 TPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAF 310
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI----NVFESMEVKDSFTYSSMVHN 351
RL L+ + + N+ Y ++ K+GK+ A + E ++ TY++++
Sbjct: 311 RLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISG 370
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
CK A +L+ + G + A++DGL G +EA K+ +RMA
Sbjct: 371 HCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKV---LRMA 422
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 172/353 (48%), Gaps = 2/353 (0%)
Query: 25 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 84
+ + PD VTYN+LI +++ +L L E + G D Y++++H Q G+ DE
Sbjct: 370 SNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDE 429
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
A + DM P T+ +++G C+ D A ++ + + KHG P V+Y L+
Sbjct: 430 AKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLN 489
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
GLC +G+ AR ++ + PNAITY +M R K ++ M KG+
Sbjct: 490 GLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFP 549
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+I + + ++ EA Y+E+ + G +++V++ T+I+ +C+ G +EAA +L
Sbjct: 550 TPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVL 609
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
D+M G D T+T L D L K G + A + M G D Y ++ R +
Sbjct: 610 DDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQW 669
Query: 325 GKIDHAINVFESMEVKDSF--TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
G++D +N+ E M + F Y+ ++ LC L A KLL L++ ++
Sbjct: 670 GRVDDMLNLLEKMLKRQPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKV 722
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 177/363 (48%), Gaps = 5/363 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L M GI + ++ +R L +L +L M + G+ P + N+ ++ L
Sbjct: 222 VLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLV 281
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ GK ++A + + M + P T+N ++ G C ++AL + GL G P+ V
Sbjct: 282 KGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKV 341
Query: 138 TYNILIKGLCKAGRLRTARWILKEL-GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+Y ++ LCK ++ + +++++ +S P+ +TY T++ ++ L L
Sbjct: 342 SYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKE 401
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
+ KG+ D GY ++ +F + GR+ EA + M + G D+V+Y +++ +C+ G+
Sbjct: 402 AQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGR 461
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
++ A +L +M K G + + ++T L++GLC +G AR + + + N Y
Sbjct: 462 IDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGA 521
Query: 317 IVDRLGKDGKIDHAINVFESMEVKDSFTYSS----MVHNLCKAKRLPSASKLLLSCLKSG 372
++ L ++GK+ A ++ M K F ++ +LC+ +++ A K L CL G
Sbjct: 522 VMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKG 581
Query: 373 VRI 375
I
Sbjct: 582 CAI 584
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 149/295 (50%), Gaps = 4/295 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ ++CQ D +++ M G +PDVVTY +++ G R + + +L +M + G
Sbjct: 417 IVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHG 476
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ SY +L++ L GK EA + TP T+ +++GL + A
Sbjct: 477 CKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEAC 536
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ R + + GF P V N+LI+ LC+ ++ A+ L+E + G A N + +TT++
Sbjct: 537 DLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGF 596
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + L +L M G D Y + A K GRL EA + + +M++ G+
Sbjct: 597 CQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTP 656
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDKYTHTILIDGLCKAGNIKGA 295
V+Y ++I+ Y + G+++ LL++M ++Q F + + +I+ LC GN++ A
Sbjct: 657 VTYRSVIHRYSQWGRVDDMLNLLEKMLKRQPF---RTVYNQVIEKLCDFGNLEEA 708
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 150/332 (45%), Gaps = 2/332 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D +C+ D IL +M + G P+ V+Y +L+ G + + ++++ E
Sbjct: 452 IVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHW 511
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y ++MH L + GK EA + ++M+ P N+++ LC+N+ A
Sbjct: 512 WTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAK 571
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ G +V + +I G C+ G + A +L ++ SG P+A+TYT +
Sbjct: 572 KYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDAL 631
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + E++ M KG Y +VI + + GR+ + + +E+M+ Q
Sbjct: 632 GKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKR--QPFR 689
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
YN +I C G LE A LL ++ + + D T +L++ K G A
Sbjct: 690 TVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACR 749
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
M + +L+ + +L DGK+ A N+
Sbjct: 750 MFRRNLTPDLKLCEKVSKKLVLDGKLVEADNL 781
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 140/303 (46%), Gaps = 5/303 (1%)
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
+ ML+ L K + A R+ R + + G + ++ +AG+LR A +L
Sbjct: 201 VVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTL 260
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ +G P+ T + + K + L+ L M+ G D Y ++I + + R
Sbjct: 261 MQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNR 320
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDKYTHT 280
+++A + + + + G D VSY T++ CKE K+E L+++M D+ T+
Sbjct: 321 IEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYN 380
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
LI L K G+ A L+ GF + Y+ IV + G++D A ++ M +
Sbjct: 381 TLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSR 440
Query: 341 ----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
D TY+++V C+ R+ A K+L K G + + A+++GL HSG EA
Sbjct: 441 GCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEA 500
Query: 397 KKI 399
+++
Sbjct: 501 REM 503
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 115/283 (40%), Gaps = 52/283 (18%)
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY--TFDGFGYCTVIAAFVKIGRLK 223
H P + Y T++ + + + +L M R+G + FGY V+ ++ + G+L+
Sbjct: 197 SHHP--VVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGY--VMVSYSRAGKLR 252
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A + M GV+ + NT I + K GKLE A L+ M+ G + D T+ LI
Sbjct: 253 NALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLI 312
Query: 284 DGLCKAGNIKGARLHLE-----------------------------------YMNKIGFD 308
G C I+ A LE M K+ ++
Sbjct: 313 KGYCDLNRIEDA---LELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWN 369
Query: 309 SNL----EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPS 360
SNL YN ++ L K G D A+ + + K D YS++VH+ C+ R+
Sbjct: 370 SNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDE 429
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A L++ G A+VDG G EAKKI ++
Sbjct: 430 AKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQM 472
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 4/239 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + CQ L G + +VV + ++I G + + +L +LD+M
Sbjct: 556 LLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLS 615
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD +Y +L L + G+ DEA + M+ L P T+ +++ + D+
Sbjct: 616 GKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDM 675
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + K P YN +I+ LC G L A +L ++ + +A T +M+
Sbjct: 676 LNLLEKMLKRQ--PFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMES 733
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA-AFVKIGRLKEATDYMEQMVTDGVQ 238
+ ++ M R+ T D C ++ V G+L EA + M + V G+Q
Sbjct: 734 YLKKGVAISAYKVACRMFRRNLTPD-LKLCEKVSKKLVLDGKLVEADNLMLRFVERGIQ 791
>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 179/356 (50%), Gaps = 2/356 (0%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
++++ + PD VTYN+ + +++ +L+ L E E D Y++++H + G+
Sbjct: 301 LKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGR 360
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
D+A + +M P T+ ++NGLC+ R D A +M R + KHG P V+Y
Sbjct: 361 MDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTA 420
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
L+ GLCK G AR ++ + PNAITY+ +M R K +++ M +KG
Sbjct: 421 LLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKG 480
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ +I + + ++ EA +MEQ + +G +++V++ T+I+ +C++ LEAA
Sbjct: 481 FFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAAL 540
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
LLD+M D T+T +ID L K G I+ A M ++G+ Y ++ +
Sbjct: 541 SLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQY 600
Query: 322 GKDGKIDHAINVFESMEVKDS--FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
+ G+++ + + E M + Y+ ++ LC L A KLL L++ +I
Sbjct: 601 CRMGRVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKI 656
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 174/347 (50%), Gaps = 12/347 (3%)
Query: 31 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 90
+V+Y+ AG RN++ ++ M + GI PD+ N+ +H L + D+A R +
Sbjct: 176 MVSYSR--AGKLRNAMRXLTM-----MQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLE 228
Query: 91 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 150
M ++ P T+N ++ G C ++A + + G P+ ++Y ++ LCK
Sbjct: 229 RMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEK 288
Query: 151 RLRTARWIL-KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 209
R++ R ++ K L DS P+ +TY T + ++ LE L + + + D GY
Sbjct: 289 RIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGY 348
Query: 210 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
++ +F + GR+ +A + + +M + G D+V+Y ++IN C+E K++ A +L +M K
Sbjct: 349 SAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYK 408
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 329
G + + ++T L++GLCK GN AR + + + N Y+ ++ ++GK
Sbjct: 409 HGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSE 468
Query: 330 AINVFESMEVKDSFTYSS----MVHNLCKAKRLPSASKLLLSCLKSG 372
A ++ M K F ++ +LC+ +++ A + + CL +G
Sbjct: 469 ACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNG 515
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 149/294 (50%), Gaps = 2/294 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ ++C+ D I+N M G PDVVTY S+I G + + + +L +M + G
Sbjct: 351 IVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHG 410
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ SY +L++ L + G EA + P T++++++G + + A
Sbjct: 411 CKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEAC 470
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ R + K GF P V N+LI+ LC+ ++ A+ +++ ++G A N + +TT++
Sbjct: 471 DLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGF 530
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + L +L M D Y T+I A K GR++EAT +M+ G
Sbjct: 531 CQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTP 590
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
V+Y T+I+ YC+ G++E LL++M + EC + + +I+ LC GN++ A
Sbjct: 591 VTYRTVIHQYCRMGRVEDLLKLLEKMLSRQ-EC-RTAYNQVIEKLCSFGNLEQA 642
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 146/318 (45%), Gaps = 2/318 (0%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D L E D V Y++++ R + + ++++EM G PDV +Y S+
Sbjct: 327 DEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSV 386
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
++ L Q K D+A ++ + M P T ++ +LNGLCKN + A M ++ +
Sbjct: 387 INGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWW 446
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+P +TY++L+ G + G+ A +++E+ G P + +++ + K
Sbjct: 447 IPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKR 506
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ G + + TVI F + L+ A ++ M D+V+Y T+I+
Sbjct: 507 FMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALG 566
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K+G++E A L +M + G+ T+ +I C+ G ++ LE M +
Sbjct: 567 KKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKM--LSRQECRT 624
Query: 313 AYNCIVDRLGKDGKIDHA 330
AYN ++++L G ++ A
Sbjct: 625 AYNQVIEKLCSFGNLEQA 642
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 128/282 (45%), Gaps = 32/282 (11%)
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
NA+R +QK G P+L N I L RL A L+ + PN ITY ++
Sbjct: 187 NAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLI 246
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
K + + E+++ M KG + D Y TV+ K R+KE ME+M+ D
Sbjct: 247 KGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNL 306
Query: 239 L-DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
L D V+YNT +++ K G + A L E E++ F DK ++ ++ C+ G + A+
Sbjct: 307 LPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAK- 365
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKR 357
E +N++ F + D TY+S+++ LC+ ++
Sbjct: 366 --EIVNEM----------------------------FSKGCIPDVVTYTSVINGLCQERK 395
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ A K+L K G + + A+++GL +G EA+++
Sbjct: 396 VDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREM 437
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 115/277 (41%), Gaps = 39/277 (14%)
Query: 120 ALRMFRGLQKHG-FVPELVTYNILIKGLCKAGRLRTARWILKELGDS--GHAPNAITYTT 176
ALR F + + + + Y +++ L K + A+ +L+ + P A Y
Sbjct: 117 ALRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGY-- 174
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
+M R K + + L+ M++ G D T I V RL +A ++E+M
Sbjct: 175 VMVSYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVE 234
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
+ ++++YN LI YC +LE A L+ EM +G DK ++ ++ LCK IK R
Sbjct: 235 IXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELR 294
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAK 356
L +E M K DSNL + D TY++ VH L K
Sbjct: 295 LLMEKMLK---DSNL---------------------------LPDQVTYNTFVHMLSKHG 324
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 393
A + L + R+ K A+V HS CR
Sbjct: 325 HGDEALEFLREAEERRFRVDKVGYSAIV----HSFCR 357
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 4/160 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + CQ D + + G + +VV + ++I G + L +L LLD+M
Sbjct: 490 LLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLS 549
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV +Y +++ L + G+ +EA ++ M+ P T+ +++ C+ ++
Sbjct: 550 NKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDL 609
Query: 121 LRMFRGLQKHGFVPELVT-YNILIKGLCKAGRLRTARWIL 159
L++ L+K E T YN +I+ LC G L A +L
Sbjct: 610 LKL---LEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLL 646
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 100/270 (37%), Gaps = 13/270 (4%)
Query: 106 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
++LN +R F G + P L++ +C+ LR+A W K G+
Sbjct: 41 MVLNSFTGGYRQTEGIRRFEGGEDESRHP-------LVREICRLIELRSA-WNPKLEGEL 92
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-YTFDGFGYCTVIAAFVKIGRLKE 224
H ++ + ++ L R+ Y D Y ++ K +
Sbjct: 93 RHLLRSLKPRQVCAVLQLQTDERVALRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQG 152
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A + M ++ ++ ++ Y + GKL A L M+K G E D I
Sbjct: 153 AKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIH 212
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 340
L + A LE M + N+ YNC++ +++ A + M K
Sbjct: 213 VLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSP 272
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
D +Y +++ LCK KR+ L+ LK
Sbjct: 273 DKISYYTVMGFLCKEKRIKELRLLMEKMLK 302
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 201/409 (49%), Gaps = 6/409 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C G+++L ++ + G P VT N+LI G + +L D++L
Sbjct: 347 ILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 406
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT-PCTATFNIMLNGLCKNRYTDN 119
G + SY +L++ + ++G A ++ + I G LT P ++ +++ LCK +
Sbjct: 407 GFQLNQVSYATLINGVCKIGDTRGAIKLLRK-IDGRLTKPNVEMYSTIIDALCKYQLVSE 465
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +F + G ++VTY+ LI G C G+L+ A +L E+ P+ TYT ++
Sbjct: 466 AYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVD 525
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ K K +L+ M + D F Y T++ ++ + +K+A M GV
Sbjct: 526 ALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTP 585
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+ +Y LIN +CK ++ A L EM ++ D T++ L+DGLCK+G I +
Sbjct: 586 DVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLI 645
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ M G +++ YN ++D L K+G +D AI +F M+ + ++FT++ ++ LCK
Sbjct: 646 DEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKG 705
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
RL A ++ L G + ++ G G EA + SK+
Sbjct: 706 GRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKME 754
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 162/322 (50%), Gaps = 35/322 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM---- 57
+IDA C++ Y + + M GIS DVVTY++LI G L ++ LL+EM
Sbjct: 453 IIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKT 512
Query: 58 -------------------------------LEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
L+ + PDV++YN+LM+ + + +A
Sbjct: 513 INPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQ 572
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
VF M +TP T+ I++NG CK++ D AL +F+ + + VP+ VTY+ L+ GL
Sbjct: 573 HVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGL 632
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK+GR+ ++ E+ D G + ITY +++ +N + + + MK +G +
Sbjct: 633 CKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNT 692
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
F + ++ K GRLK+A + + ++T G LD+ YN +I +CK+G LE A +L +
Sbjct: 693 FTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSK 752
Query: 267 MEKQGFECDKYTHTILIDGLCK 288
ME+ G + T I+I+ L K
Sbjct: 753 MEENGCIPNAVTFDIIINALFK 774
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 193/402 (48%), Gaps = 5/402 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+IDA C++ Y + + M GIS +VVTY++LI G L +L LL+ M+
Sbjct: 139 IIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKT 198
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V +YN L+ L + GK EA V M+ + T++ +++G A
Sbjct: 199 INPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQ 258
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + G P++ +YNI+I G CK R+ A + KE+ S P I + I+
Sbjct: 259 HVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP-IIQFNKILDSF 317
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + Y + + ++ KG D F +I F +G++ + +++ G
Sbjct: 318 AKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPST 377
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+ NTLI C +G+++ A D++ QGF+ ++ ++ LI+G+CK G+ +GA L
Sbjct: 378 VTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRK 437
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
++ N+E Y+ I+D L K + A +F M VK D TYS++++ C +
Sbjct: 438 IDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGK 497
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L A LL + + +VD L G +EAK +
Sbjct: 498 LKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSV 539
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 196/441 (44%), Gaps = 38/441 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM---- 57
L+D Y + N M G++PDV +YN +I G + + +L+L EM
Sbjct: 244 LMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSR 303
Query: 58 -----------------------------LEM-GIPPDVWSYNSLMHCLFQLGKPDEANR 87
LE+ GI PD+++ N L++C +G+
Sbjct: 304 FPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFS 363
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
V ++ P T T N ++ GLC AL L GF V+Y LI G+C
Sbjct: 364 VLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVC 423
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K G R A +L+++ PN Y+TI+ + + + S M KG + D
Sbjct: 424 KIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVV 483
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y T+I F +G+LKEA + +MV + D+ +Y L++ KEGK++ A +L M
Sbjct: 484 TYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVM 543
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
K + D +T+ L++G +K A+ M+ +G ++ Y +++ K +
Sbjct: 544 LKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMV 603
Query: 328 DHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
D A+N+F+ M V D+ TYSS+V LCK+ R+ L+ G ++
Sbjct: 604 DEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSL 663
Query: 384 VDGLRHSGCRREAKKIQSKIR 404
+DGL +G +A + +K++
Sbjct: 664 IDGLCKNGHLDKAIALFNKMK 684
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 110/201 (54%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ D + M + + PD VTY+SL+ G ++ +S DL+DEM +
Sbjct: 592 ILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDR 651
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P DV +YNSL+ L + G D+A +F M + P T TF I+L+GLCK +A
Sbjct: 652 GQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDA 711
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ L G+ ++ YN++I G CK G L A +L ++ ++G PNA+T+ I+
Sbjct: 712 QEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINA 771
Query: 181 CFRNRKYKLGLEILSAMKRKG 201
F+ + ++L M +G
Sbjct: 772 LFKKDENDKAEKLLRQMIARG 792
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 117/239 (48%)
Query: 99 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 158
P T T N ++ GLC AL L GF V+Y LI G+C+ G R A
Sbjct: 61 PDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKF 120
Query: 159 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 218
L+++ PN Y TI+ + + + S M KG + + Y T+I F
Sbjct: 121 LRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCI 180
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
+G+LKEA + MV + ++ +YN L++ CKEGK++ A +L M K + + T
Sbjct: 181 VGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVIT 240
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
++ L+DG +K A+ M+ +G ++ +YN +++ K ++D A+N+F+ M
Sbjct: 241 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEM 299
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 10/218 (4%)
Query: 158 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 217
+L ++ G+ P+ +T T++K + K L + +G+ + Y T+I
Sbjct: 50 VLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVC 109
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 277
+IG + A ++ ++ + ++ YNT+I+ CK + AY L EM +G +
Sbjct: 110 RIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVV 169
Query: 278 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
T++ LI G C G +K A L M + N+ YN +VD L K+GK+ A +V M
Sbjct: 170 TYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVM 229
Query: 338 E---VKDS-FTYSS------MVHNLCKAKRLPSASKLL 365
VK + TYS+ +V+ + KA+ + +A L+
Sbjct: 230 LKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLM 267
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 4/209 (1%)
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N + L +L+ + ++GY D T+I G++KEA + ++++ G QL+
Sbjct: 39 IQNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQ 98
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
VSY TLIN C+ G AA L +++ + + + + +ID LCK + A
Sbjct: 99 VSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSE 158
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G +N+ Y+ ++ GK+ A+ + M +K + TY+ +V LCK +
Sbjct: 159 MTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGK 218
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+ A +L LK+ V+ ++DG
Sbjct: 219 VKEAKSVLAVMLKACVKSNVITYSTLMDG 247
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ D + N+M++ GI P+ T+ L+ G + L + ++ ++L G
Sbjct: 663 LIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 722
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
DV+ YN +++ + G +EA + M P TF+I++N L K D A
Sbjct: 723 YHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAE 782
Query: 122 RMFRGLQKHGFV 133
++ R + G +
Sbjct: 783 KLLRQMIARGLL 794
>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 687
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 171/354 (48%), Gaps = 6/354 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM--GIPPDVWSYNSLMHC 75
+L M G++PDVVTYNS IA ++ ++DLL +M+ GI PDV +YNS +
Sbjct: 132 LLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAA 191
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
G+ EA + + M+ + P T+N + K R + A+ + + + GF P
Sbjct: 192 CSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPS 251
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
TYN +I K GR A +L ++ + + I+Y++++ C R R++K +++L
Sbjct: 252 TRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLE 311
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M+ +G + + Y + I A K R KEA D + +M T G+ ++SYN+ G
Sbjct: 312 QMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNG 371
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
+ A LL EM QG + ++ +D K G + A L M+ +G D ++ ++N
Sbjct: 372 RWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFN 431
Query: 316 CIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
+D G+ + + A+ + M + TY+S + ++ R A L
Sbjct: 432 SAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLF 485
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 173/360 (48%), Gaps = 4/360 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L +MR G+SP+V++YNS I + +LDLL EM +G+ P V SYNS
Sbjct: 309 LLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACA 368
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
G+ EA + ++M + P T ++N L+ K + A+++ RG+ G P+++
Sbjct: 369 VNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDII 428
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
++N I + + TA +L+E+ +G PN ITY + ++ C R+ +++ + + M
Sbjct: 429 SFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREM 488
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+G + + Y ++I A K + + A + M GV D++SYN+ I K +
Sbjct: 489 PTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQW 548
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
E A LL M +G + D ++ + K+G + A L+ M +G N +Y
Sbjct: 549 ELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAA 608
Query: 318 VDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ GK + D A+ + + M+ + TYS+ + K R A LL + G+
Sbjct: 609 IHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGL 668
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 169/352 (48%), Gaps = 4/352 (1%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
GI+PDVVTYNS IA + ++DLL++M+ G+PP++ +YNS + + + +EA
Sbjct: 177 GITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEA 236
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+ +++I P T T+N +++ K A+ + + + ++++Y+ +I
Sbjct: 237 MDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAA 296
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
+ R + A +L+++ G +PN I+Y + + C + ++K L++L M G
Sbjct: 297 CGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPT 356
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y + AA GR EA + +++M G+ + +SYN+ ++ K G+ E A LL
Sbjct: 357 VISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLR 416
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M G + D + ID + + A L M G N+ YN ++ G+
Sbjct: 417 GMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSA 476
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ A+ +F M + + TY+SM+ K ++ A +LL GV
Sbjct: 477 RWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGV 528
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 164/352 (46%), Gaps = 4/352 (1%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
IDA + + +L M G+ P V++YNS A N +L+LL EM GI
Sbjct: 329 IDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGI 388
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P+ SYNS + + G+ ++A ++ + M P +FN ++ + + + A+
Sbjct: 389 APNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVE 448
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ R + G P ++TYN I+ ++ R + A + +E+ G +PN +TY +++ C
Sbjct: 449 LLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACA 508
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ +++L +++L+ M +G D Y + I A K + + A ++ M T G + DI+
Sbjct: 509 KGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDII 568
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
SYN+ + K G+ A LL +M G + ++ I K A L+ M
Sbjct: 569 SYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEM 628
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVH 350
G NL Y+ +D K G+ A+++ + D+ TY +++
Sbjct: 629 QTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVIS 680
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 172/383 (44%), Gaps = 4/383 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L +M G+ P+++TYNS I + ++DLL+E++E G PP +YN ++
Sbjct: 204 LLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACA 263
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G+ EA + M+ D+ +++ ++ + R A+ + ++ G P ++
Sbjct: 264 KGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVI 323
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
+YN I K R + A +L+E+ G P I+Y + C N ++ LE+L M
Sbjct: 324 SYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEM 383
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+G + Y + + A K G+ ++A + M T G DI+S+N+ I+ + +
Sbjct: 384 PAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQW 443
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
E A LL EM G + T+ I+ ++ + A M G N+ YN +
Sbjct: 444 ETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSM 503
Query: 318 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+D K + + A+ + M + D +Y+S + K ++ A +LL G
Sbjct: 504 IDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGP 563
Query: 374 RILKSAQKAVVDGLRHSGCRREA 396
+ + + V SG REA
Sbjct: 564 KPDIISYNSAVTACAKSGRWREA 586
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 181/407 (44%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+IDA + + +L +M I DV++Y+S+IA R ++DLL++M G
Sbjct: 258 VIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQG 317
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V SYNS + + + EA + ++M L P ++N N AL
Sbjct: 318 VSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEAL 377
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P ++YN + K G+ A +L+ + G P+ I++ + + C
Sbjct: 378 ELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDAC 437
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R ++++ +E+L M G T + Y + I A + R +EA +M T G+ ++
Sbjct: 438 GRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNV 497
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN++I+ K + E A LL M +G D ++ I+ K + A L+
Sbjct: 498 VTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKG 557
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G ++ +YN V K G+ A+ + + M ++ +Y + +H K ++
Sbjct: 558 MPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQ 617
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
A ++L G A +D G +EA + + +R
Sbjct: 618 WDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLR 664
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 125/249 (50%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
IDA + ++ +L M AG++P+V+TYNS I R++ ++ L EM G+
Sbjct: 434 IDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGL 493
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P+V +YNS++ + + + A ++ M + P ++N + K + AL+
Sbjct: 494 SPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQ 553
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ +G+ G P++++YN + K+GR R A +LK++ G PN ++Y + C
Sbjct: 554 LLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACG 613
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ ++ + + IL M+ G T + Y I A K GR KEA D + + G+ D
Sbjct: 614 KGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQ 673
Query: 243 SYNTLINLY 251
+Y T+I+ +
Sbjct: 674 TYLTVISAF 682
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 131/306 (42%), Gaps = 41/306 (13%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA----- 155
T ++NI + R A+R+ R + G P++VTYN I K GR + A
Sbjct: 110 TTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLT 169
Query: 156 ---------------------------RW-----ILKELGDSGHAPNAITYTTIMKCCFR 183
RW +L+++ G PN ITY + + C +
Sbjct: 170 QMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAK 229
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
R+++ +++L + +G+ Y VI A K GR EA D + QM+T+ + D++S
Sbjct: 230 GRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVIS 289
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
Y+++I + + + A LL++M QG + ++ ID K K A L M
Sbjct: 290 YSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMT 349
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLP 359
+G + +YN +G+ A+ + + M + ++ +Y+S + K +
Sbjct: 350 TVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWE 409
Query: 360 SASKLL 365
A KLL
Sbjct: 410 KAVKLL 415
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 124/266 (46%), Gaps = 18/266 (6%)
Query: 112 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 171
K R AL + G + +YNI I + TA +L+E+ G P+
Sbjct: 86 AKGRDWRTALAALDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDV 145
Query: 172 ITYTTIMKCCFRNRKYKLGLEILSAM--KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
+TY + + C + ++K +++L+ M +G T D Y + IAA GR KEA D +
Sbjct: 146 VTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLL 205
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
EQMV GV ++++YN+ I K + E A LL+E+ +QGF T+ +ID K
Sbjct: 206 EQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKG 265
Query: 290 GNIKGARLHLEYMNKIG------FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
G LE M+ +G +++ +Y+ ++ G+ + A+++ E M +
Sbjct: 266 GR------WLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVS 319
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLL 365
+ +Y+S + K R A LL
Sbjct: 320 PNVISYNSAIDACAKGDRWKEALDLL 345
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 91/182 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+IDA + ++ +L M G++PDV++YNS I + +L LL M G
Sbjct: 503 MIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRG 562
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ SYNS + + G+ EA + +DM LTP T ++ ++ K D A+
Sbjct: 563 PKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAV 622
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + +Q HG P L+TY+ I K GR + A +L +L G P+A TY T++
Sbjct: 623 RILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVISAF 682
Query: 182 FR 183
R
Sbjct: 683 QR 684
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 117/257 (45%), Gaps = 10/257 (3%)
Query: 125 RGLQKHGFVPELVTY--NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
RG G P+ + +IL++ K RTA L E SG + + +Y + C
Sbjct: 64 RGAASRGGKPKSLVKLKSILLE--AKGRDWRTALAALDEFKISGGSLDTTSYNIAIAACS 121
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV--TDGVQLD 240
R++ + +L M +G T D Y + IAA K GR KEA D + QMV T+G+ D
Sbjct: 122 NGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPD 181
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YN+ I G+ + A LL++M QG + T+ I K + A LE
Sbjct: 182 VVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLE 241
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
+ + GF + YN ++D K G+ A+++ M D +YSS++ + +
Sbjct: 242 EVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGR 301
Query: 357 RLPSASKLLLSCLKSGV 373
R A LL GV
Sbjct: 302 RWKEAMDLLEQMRTQGV 318
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 198/409 (48%), Gaps = 47/409 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ +C+ D + +L+ M+E G+ DV+ +++LI G R + +L+ M E
Sbjct: 5 VINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE-E 63
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-----ICGDLTPCTATFNIMLNGLCKNRY 116
P+V +YN++++ L + + DE +F DM P +++ +++ LCK +
Sbjct: 64 CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQR 123
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
D A F+ ++ G P +VTY+ LI GLCK R+ A +L +L P A+ Y
Sbjct: 124 VDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNA 183
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ R K LE+L MK KG+ + + ++ A K ++A + E+++ G
Sbjct: 184 VVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSG 243
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA- 295
+ ++V+YN ++ CK GK++ AY +L EM + D T++ +IDG CKAG + A
Sbjct: 244 KKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKAD 303
Query: 296 -----------------------------------RLHLEYMNKIGFDSNLEAYNCIVDR 320
R+H + +N GF L+ YN ++D
Sbjct: 304 DVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNA-GFIPGLQTYNVLMDC 362
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
+ ++ A+ ++ M+ K D+ TY+ ++ LC+A+R+ A + L
Sbjct: 363 VCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFL 411
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 171/378 (45%), Gaps = 20/378 (5%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L M+E G +++ +N+++ +N + + +L+ G P+V +YN +H L
Sbjct: 200 LLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLC 259
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ GK DEA R+ +M+ +TP T++ +++G CK D A +F + H +P V
Sbjct: 260 KAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPV 319
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T+ L+ G + + R A + +++ ++G P TY +M C + LEI M
Sbjct: 320 TFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKM 379
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
KRK D Y +I + R+ EA ++++ M D V + + L+ + CK+G++
Sbjct: 380 KRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEV 439
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A +LD + + +CKAG A +E M G + Y +
Sbjct: 440 DEACSVLDNVVE----------------ICKAGEPDEAVEVIEQMVLKGVRPDEATYVAV 483
Query: 318 VDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ L ++D AI FE M + TY+ ++ C A A ++ + + +G
Sbjct: 484 LRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGF 543
Query: 374 RILKSAQKAVVDGLRHSG 391
+ + LR +G
Sbjct: 544 TPQAQTMRTLSSCLRDAG 561
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 151/297 (50%), Gaps = 10/297 (3%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
+ ++NG CK D A + +++ G +++ ++ LI+GLC+ GR+ A K +G
Sbjct: 2 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK-----GYTFDGFGYCTVIAAFVK 218
+ +PN ITY T++ + + GLE+ M+++ G D Y TVI A K
Sbjct: 62 EEC-SPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
R+ +A +Y ++M G ++V+Y++LI+ CK +++ AY LL +++ +
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE--- 335
+ +++G + G L +M + GF N+ +N ++ L K+ + + A FE
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 240
Query: 336 -SMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
S + + TY+ VH LCKA ++ A ++LL ++S V +++DG +G
Sbjct: 241 KSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAG 297
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 162/373 (43%), Gaps = 9/373 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREA-----GISPDVVTYNSLIAGATRNSLLSCSLDLLDE 56
+++ C+ D G + + M + G PDV++Y+++I + + + +
Sbjct: 74 VVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKR 133
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
M +G P+V +Y+SL+ L ++ + DEA + + D+ P +N ++NG +
Sbjct: 134 MRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGK 193
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
L + +++ GF ++ +N ++ L K A + L SG PN +TY
Sbjct: 194 PSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNV 253
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
+ + K IL M T D Y ++I F K GR+ +A D +M+
Sbjct: 254 AVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHE 313
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
V++ TL++ + + K A+ + ++M GF T+ +L+D +C A +++ A
Sbjct: 314 CIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESAL 373
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHN----L 352
M + + Y ++ L + ++D A + ME + ++ H L
Sbjct: 374 EIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVL 433
Query: 353 CKAKRLPSASKLL 365
CK + A +L
Sbjct: 434 CKQGEVDEACSVL 446
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 10/280 (3%)
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
Y +I G CKAG++ A +L E+ + G + + ++T+++ R + LE +M
Sbjct: 2 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM-----VTDGVQLDIVSYNTLINLYCK 253
+ + + Y TV+ K R+ E + + M + G + D++SY+T+I+ CK
Sbjct: 62 EE-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120
Query: 254 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
+++ AY M G + T++ LIDGLCK + A L +
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180
Query: 314 YNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 369
YN +V+ + GK + + M+ K + +++M+H L K A + L
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 240
Query: 370 KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
KSG + V GL +G EA +I ++ +K++
Sbjct: 241 KSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVT 280
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 87/207 (42%), Gaps = 20/207 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C S ++ I ++M+ PD TY LI R + + + LD M
Sbjct: 358 VLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEAD 417
Query: 61 GIPPDVWSYNSLMHCL-------------------FQLGKPDEANRVFQDMICGDLTPCT 101
+ P+ ++L+ L + G+PDEA V + M+ + P
Sbjct: 418 NVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDE 477
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
AT+ +L LC D+A+ F + G P LVTY +LI C A A I +
Sbjct: 478 ATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEA 537
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYK 188
+ +G P A T T + C R+ Y+
Sbjct: 538 MVAAGFTPQAQTMRT-LSSCLRDAGYQ 563
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 48/116 (41%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
C+ D ++ +M G+ PD TY +++ + ++ ++M G P +
Sbjct: 453 CKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGL 512
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
+Y L+ D+A R+F+ M+ TP T + + L Y D +R
Sbjct: 513 VTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQDLLVR 568
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 193/389 (49%), Gaps = 4/389 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ + IL M G+SPD TYN+L+ + R S + ++ EML G
Sbjct: 194 IINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQG 253
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ S++SL+ + D+A F+DM L P + ++++G C+N AL
Sbjct: 254 VVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEAL 313
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + + G V +++ YN ++ GLCK L A + E+ + G P+ T+TT++
Sbjct: 314 KIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGH 373
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ L + M ++ D Y T+I F K+G +++A++ + M++ + +
Sbjct: 374 CQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNH 433
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y LIN YC G + A+ L D M ++G + T +I G C++G+ A L
Sbjct: 434 ITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGR 493
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G + +YN +++ ++ +D A ME + D TY+ +++ C+ R
Sbjct: 494 MIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGR 553
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+ A +L ++ G+ +S A+++G
Sbjct: 554 MQEAELVLRKMIEKGINPDRSTYTALING 582
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 191/442 (43%), Gaps = 39/442 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI Y Q G +R G + NSL+ G + + + ++ E++
Sbjct: 53 LLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRS 112
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI +V++ N +++ L + GK D+ +M + T+N ++ C+ + A
Sbjct: 113 GIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEA 172
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P L TYN +I GLCK GR A+ IL E+ + G +P+ TY T++
Sbjct: 173 FEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVE 232
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM----------- 229
R + EI M R+G D + ++IA F + L +A Y
Sbjct: 233 SCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPD 292
Query: 230 ------------------------EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
++M+ G LD+++YNT++N CKE L A L D
Sbjct: 293 NVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFD 352
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM ++G D YT T LI G C+ GN+ A M + ++ AYN ++D K G
Sbjct: 353 EMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVG 412
Query: 326 KIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+++ A +++ M + F TY +++ C + A +L ++ G++
Sbjct: 413 EMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCN 472
Query: 382 AVVDGLRHSGCRREAKKIQSKI 403
V+ G SG +A + ++
Sbjct: 473 TVIKGYCRSGDSSKADEFLGRM 494
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 163/336 (48%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + + D M++ G+ PD V Y L+ G RN + +L + DEMLE G
Sbjct: 264 LIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQG 323
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
DV +YN++++ L + +A+++F +M+ P TF +++G C++ AL
Sbjct: 324 CVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKAL 383
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + + P++V YN LI G CK G + A + + PN ITY ++
Sbjct: 384 SLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAY 443
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ M KG TVI + + G +A +++ +M+ GV D
Sbjct: 444 CSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDH 503
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+SYNTLIN + +E ++ A+L +++MEK+G D T+ ++++G C+ G ++ A L L
Sbjct: 504 ISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRK 563
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M + G + + Y +++ ++ A + M
Sbjct: 564 MIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEM 599
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 158/308 (51%), Gaps = 2/308 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ YC+ + I + M E G DV+ YN+++ G + +L+ + L DEM+E
Sbjct: 298 VLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVER 357
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD +++ +L+H Q G +A +F M ++ P +N +++G CK + A
Sbjct: 358 GALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKA 417
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ G+ P +TY ILI C G + A + + + G P +T T++K
Sbjct: 418 SELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKG 477
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R+ E L M KG D Y T+I FV+ + +A ++ +M +G+ D
Sbjct: 478 YCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPD 537
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
I++YN ++N +C++G+++ A L+L +M ++G D+ T+T LI+G N+ A R H
Sbjct: 538 IITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHD 597
Query: 300 EYMNKIGF 307
E + + GF
Sbjct: 598 EMLQR-GF 604
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 185/391 (47%), Gaps = 4/391 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++A C+ FD + L+ M GI D+VTYN+LI R LL + ++++ M +
Sbjct: 123 IMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADK 182
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P +++YN++++ L + G+ A + +M+ L+P T T+N +L C+ A
Sbjct: 183 GLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEA 242
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + + G VP+LV+++ LI + L A +++ G P+ + YT +M
Sbjct: 243 KEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHG 302
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
RN L+I M +G D Y T++ K L +A ++MV G D
Sbjct: 303 YCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPD 362
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++ TLI+ +C++G + A L M ++ + D + LIDG CK G ++ A +
Sbjct: 363 FYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWD 422
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDSF-TYSSMVHNLCKAK 356
M N Y +++ G + A +++ M +K + T ++++ C++
Sbjct: 423 GMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSG 482
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
A + L + GV + +++G
Sbjct: 483 DSSKADEFLGRMIAKGVAPDHISYNTLINGF 513
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 132/258 (51%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + M E G PD T+ +LI G ++ ++ +L L M + I PD+ +YN+L+
Sbjct: 350 LFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFC 409
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
++G+ ++A+ ++ MI + P T+ I++N C + A R++ + + G P LV
Sbjct: 410 KVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLV 469
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T N +IKG C++G A L + G AP+ I+Y T++ R ++ M
Sbjct: 470 TCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKM 529
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+++G D Y V+ F + GR++EA + +M+ G+ D +Y LIN + + L
Sbjct: 530 EKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNL 589
Query: 258 EAAYLLLDEMEKQGFECD 275
A+ DEM ++GF D
Sbjct: 590 NEAFRFHDEMLQRGFAPD 607
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 136/299 (45%), Gaps = 4/299 (1%)
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
+CG+ F++++ + R FR L+ G++ + N L+ GL K +
Sbjct: 40 MCGNCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWV 99
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
A + +E+ SG N T ++ ++ K+ LS M+ G D Y T+
Sbjct: 100 ELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTL 159
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I A+ + G L+EA + M M G++ + +YN +IN CK+G+ A +L EM G
Sbjct: 160 IGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGL 219
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
D T+ L+ C+ N A+ M + G +L +++ ++ ++ +D A+
Sbjct: 220 SPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALV 279
Query: 333 VFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
F M+ V D+ Y+ ++H C+ + A K+ L+ G + A +++GL
Sbjct: 280 YFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGL 338
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+AYC + + + M E GI P +VT N++I G R+ S + + L M+
Sbjct: 438 ILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAK 497
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD SYN+L++ + D+A M L P T+N+++NG C+ A
Sbjct: 498 GVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEA 557
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
+ R + + G P+ TY LI G L A E+ G AP+ +
Sbjct: 558 ELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 171/341 (50%), Gaps = 4/341 (1%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
NRM P +N++++ +N + L + GI PD+ + + L++C
Sbjct: 49 FNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCH 108
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
L A VF +++ P T N ++ GLC AL + GF + V+
Sbjct: 109 LTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVS 168
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
Y LI GLCKAG + +L++L P+ + YTTI+ C +N+ ++ S M
Sbjct: 169 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMI 228
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
KG + + F Y T+I F +G LKEA + +M + D+ ++N LI+ KEGK++
Sbjct: 229 VKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKID 288
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A L +EM+ + + T+T LIDGLCK +++ A + M + G N+ +Y ++
Sbjct: 289 EAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILL 348
Query: 319 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
D L K G++++A F+ + VK + TY+ M++ LCKA
Sbjct: 349 DALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKA 389
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 153/320 (47%), Gaps = 6/320 (1%)
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+A F M+ P T FN +L+ L KN+ + +F+ + +G P+L T +ILI
Sbjct: 44 DAVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILI 103
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGY 202
C + A + + G+ PNAIT T++K CF + K L + +G+
Sbjct: 104 NCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCG-EIKRALHFHDKVVAQGF 162
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
D Y T+I K G K + ++ V+ D+V Y T+I+ CK L A
Sbjct: 163 QLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACD 222
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
L EM +G + +T+T LI G C GN+K A L M + ++ +N ++D L
Sbjct: 223 LYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALA 282
Query: 323 KDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
K+GKID A+++FE M+ K+ F TY+S++ LCK L A L + G++
Sbjct: 283 KEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVY 342
Query: 379 AQKAVVDGLRHSGCRREAKK 398
+ ++D L G AK+
Sbjct: 343 SYTILLDALCKGGRLENAKQ 362
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 136/290 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C +++ + + G P+ +T N+LI G + +L D+++
Sbjct: 101 ILINCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQ 160
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D SY +L++ L + G+ R+ + + + P + +++ LCKN+ +A
Sbjct: 161 GFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDA 220
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G P + TY LI G C G L+ A +L E+ P+ T+ ++
Sbjct: 221 CDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDA 280
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + + MK K + Y ++I K L+ A ++M G+Q +
Sbjct: 281 LAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPN 340
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+ SY L++ CK G+LE A + +G+ + T+ ++I+GLCKAG
Sbjct: 341 VYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAG 390
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 123/270 (45%), Gaps = 35/270 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ A +L ++ + PD+V Y ++I +N LL + DL EM+ G
Sbjct: 172 LINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKG 231
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V++Y +L+H +G EA + +M ++ P TFNI+++ L K D A+
Sbjct: 232 ISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAM 291
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ P +VTY LI GLCK L A + K++ + G PN +YT ++
Sbjct: 292 SLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLD-- 349
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
A K GRL+ A + + ++ G L++
Sbjct: 350 ---------------------------------ALCKGGRLENAKQFFQHLLVKGYHLNV 376
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+YN +IN CK G L +ME +G
Sbjct: 377 RTYNVMINGLCKAGLFGDVMDLKSKMEGKG 406
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDA + D ++ M+ + P++VTY SLI G +N L ++ L +M E
Sbjct: 276 ILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQ 335
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+V+SY L+ L + G+ + A + FQ ++ T+N+M+NGLCK +
Sbjct: 336 GIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDV 395
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+ + ++ G +P +T+ +I L + A L+E+ G
Sbjct: 396 MDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARG 441
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 10/210 (4%)
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
F + ++++ VK R +Q +G+ D+ + + LIN +C + A+ +
Sbjct: 62 FLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFAN 121
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI---GFDSNLEAYNCIVDRLGK 323
+ K+G+ + T LI GLC G IK A L + +K+ GF + +Y +++ L K
Sbjct: 122 ILKRGYHPNAITLNTLIKGLCFCGEIKRA---LHFHDKVVAQGFQLDQVSYGTLINGLCK 178
Query: 324 DGKIDHAINVFESME---VK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
G+ + +E VK D Y++++H LCK K L A L + G+
Sbjct: 179 AGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFT 238
Query: 380 QKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
++ G G +EA + +++++ I+
Sbjct: 239 YTTLIHGFCIMGNLKEAFSLLNEMKLKNIN 268
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 168/320 (52%), Gaps = 4/320 (1%)
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
E GI + SYN +++ L +LGK EA+R+ M TP +++ +++G C
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELK 310
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
AL++ +Q G P TYN +I LCK G+ A +L+E+ P+ + YTT++
Sbjct: 311 KALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLI 370
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
F+ + + M K + D Y T+I F + G++ E + +M++ G++
Sbjct: 371 HGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLK 430
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D V+Y TLI++YCK G++ A+ L +EM + G + T+ LIDGLCK G + A
Sbjct: 431 PDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANEL 490
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCK 354
L+ M K G N+ YN +V+ + K G I+ AI + + MEV D+ TY++++ C+
Sbjct: 491 LDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCR 550
Query: 355 AKRLPSASKLLLSCLKSGVR 374
+ A KLL L G++
Sbjct: 551 LGDIDKAHKLLQEMLDRGLQ 570
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 193/414 (46%), Gaps = 18/414 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL-------DLL 54
+ID YC +++ M+ G+ P+ TYNS+I LL C + +L
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSII-------LLLCKIGKSFEAEKVL 351
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
EM+ I PD Y +L+H F+LG AN+ F +M+ ++P T+ ++ G +
Sbjct: 352 REMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQG 411
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
+F + G P+ VTY LI CKAG + A + E+ G PN +TY
Sbjct: 412 GKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTY 471
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
++ ++ + E+L M++KG + Y +++ K G +++A M++M
Sbjct: 472 GALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEV 531
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G+ D ++Y T+I+ YC+ G ++ A+ LL EM +G + T +L++G C G ++
Sbjct: 532 AGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLED 591
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVH 350
L +M + G + YN ++ + ++ +++ M DS TY+ ++
Sbjct: 592 GDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIK 651
Query: 351 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
CKA+ L A L ++ G ++ A++ EA+++ ++R
Sbjct: 652 GHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMR 705
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 186/377 (49%), Gaps = 4/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I + C+ + +L +M +PDVV+Y+++I G L +L L+D+M
Sbjct: 263 IIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIK 322
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ ++YNS++ L ++GK EA +V ++M+ + P + +++G K + A
Sbjct: 323 GLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTA 382
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ F + P+ +TY LI+G + G++ + + E+ G P+ +TYTT++
Sbjct: 383 NKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDV 442
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + + M + G T + Y +I K G L A + +++M G+QL+
Sbjct: 443 YCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLN 502
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ YN+++N CK G +E A L+ EME G + D T+T +ID C+ G+I A L+
Sbjct: 503 VCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQ 562
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV----FESMEVKDSFTYSSMVHNLCKAK 356
M G + +N +++ G ++ + E V D+ TY++++ C
Sbjct: 563 EMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRN 622
Query: 357 RLPSASKLLLSCLKSGV 373
+ + +K+ GV
Sbjct: 623 SMNTTTKIYKRMRNQGV 639
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 133/265 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ D +L+ MR+ G+ +V YNS++ G + + ++ L+ EM G
Sbjct: 474 LIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG 533
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD +Y +++ +LG D+A+++ Q+M+ L P TFN+++NG C ++
Sbjct: 534 IDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGD 593
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + + G VP+ +TYN L+K C + T I K + + G AP++ TY ++K
Sbjct: 594 RLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGH 653
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R K + M KGY Y +I F K + EA + E+M G+ D
Sbjct: 654 CKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADG 713
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDE 266
YN +++ +EG +E L DE
Sbjct: 714 EIYNFFVDMCYEEGDVEITLNLCDE 738
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 155/332 (46%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + Q + + M G+ PD VTY +LI + + + L +EM++MG
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMG 463
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++ +Y +L+ L + G+ D AN + +M L +N M+NG+CK + A+
Sbjct: 464 MTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAI 523
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + ++ G P+ +TY +I C+ G + A +L+E+ D G P +T+ +M
Sbjct: 524 KLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGF 583
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ G +L M KG D Y T++ + T ++M GV D
Sbjct: 584 CMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDS 643
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN LI +CK L+ A+ L EM ++G+ ++ LI K AR E
Sbjct: 644 NTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEE 703
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
M G ++ E YN VD ++G ++ +N+
Sbjct: 704 MRGHGLVADGEIYNFFVDMCYEEGDVEITLNL 735
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 174/364 (47%), Gaps = 10/364 (2%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P+ + ++ LS + LLD++L G+ V S N+ L ++ E +
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAF---LSRIANNSEGIEM 244
Query: 89 FQDMICG-DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
+ C ++ T ++NI++ LC+ A R+ + P++V+Y+ +I G C
Sbjct: 245 AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYC 304
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
G L+ A ++ ++ G PN TY +I+ + K ++L M + D
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV 364
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y T+I F K+G ++ A + ++M++ + D ++Y TLI + + GK+ L EM
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
+G + D+ T+T LID CKAG + A LH E M ++G N+ Y ++D L K G+
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNE-MVQMGMTPNIVTYGALIDGLCKHGE 483
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+D A + + M K + Y+SMV+ +CKA + A KL+ +G+
Sbjct: 484 LDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTT 543
Query: 383 VVDG 386
V+D
Sbjct: 544 VIDA 547
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 79/193 (40%), Gaps = 35/193 (18%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ +C + G +L M E GI PD +TYN+L+ + ++ + + M
Sbjct: 578 VLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQ 637
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD + T+NI++ G CK R A
Sbjct: 638 GVAPD-----------------------------------SNTYNILIKGHCKARNLKEA 662
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + + G+VP + +YN LIK K + AR + +E+ G + Y +
Sbjct: 663 WFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDM 722
Query: 181 CFRNRKYKLGLEI 193
C+ ++ L +
Sbjct: 723 CYEEGDVEITLNL 735
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 107/237 (45%), Gaps = 11/237 (4%)
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFG-----YCTVIAAFVKIGRLKEATDYMEQMVTDG 236
F N K ++G+++ R YT+ +G + V+IG L EA ++++++ G
Sbjct: 161 FLNSKLEIGVKMTQFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYG 220
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
+ + + S N ++ E + + + G + ++ I+I LC+ G +K A
Sbjct: 221 LVVTVDSCNAFLSRIANNS--EGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAH 278
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
L M+ ++ +Y+ ++D G++ A+ + + M++K + +TY+S++ L
Sbjct: 279 RLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLL 338
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
CK + A K+L + + ++ G G R A K ++ KIS
Sbjct: 339 CKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKIS 395
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 168/320 (52%), Gaps = 4/320 (1%)
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
E GI + SYN +++ L +LGK EA+R+ M TP +++ +++G C
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELK 310
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
AL++ +Q G P TYN +I LCK G+ A +L+E+ P+ + YTT++
Sbjct: 311 KALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLI 370
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
F+ + + M K + D Y T+I F + G++ E + +M++ G++
Sbjct: 371 HGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLK 430
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D V+Y TLI++YCK G++ A+ L +EM + G + T+ LIDGLCK G + A
Sbjct: 431 PDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANEL 490
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCK 354
L+ M K G N+ YN +V+ + K G I+ AI + + MEV D+ TY++++ C+
Sbjct: 491 LDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCR 550
Query: 355 AKRLPSASKLLLSCLKSGVR 374
+ A KLL L G++
Sbjct: 551 LGDIDKAHKLLQEMLDRGLQ 570
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 193/414 (46%), Gaps = 18/414 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL-------DLL 54
+ID YC +++ M+ G+ P+ TYNS+I LL C + +L
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSII-------LLLCKIGKSFEAEKVL 351
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
EM+ I PD Y +L+H F+LG AN+ F +M+ ++P T+ ++ G +
Sbjct: 352 REMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQG 411
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
+F + G P+ VTY LI CKAG + A + E+ G PN +TY
Sbjct: 412 GKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTY 471
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
++ ++ + E+L M++KG + Y +++ K G +++A M++M
Sbjct: 472 GALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEV 531
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G+ D ++Y T+I+ YC+ G ++ A+ LL EM +G + T +L++G C G ++
Sbjct: 532 AGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLED 591
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVH 350
L +M + G + YN ++ + ++ +++ M DS TY+ ++
Sbjct: 592 GDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIK 651
Query: 351 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
CKA+ L A L ++ G ++ A++ EA+++ ++R
Sbjct: 652 GHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMR 705
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 186/377 (49%), Gaps = 4/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I + C+ + +L +M +PDVV+Y+++I G L +L L+D+M
Sbjct: 263 IIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIK 322
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ ++YNS++ L ++GK EA +V ++M+ + P + +++G K + A
Sbjct: 323 GLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTA 382
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ F + P+ +TY LI+G + G++ + + E+ G P+ +TYTT++
Sbjct: 383 NKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDV 442
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + + M + G T + Y +I K G L A + +++M G+QL+
Sbjct: 443 YCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLN 502
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ YN+++N CK G +E A L+ EME G + D T+T +ID C+ G+I A L+
Sbjct: 503 VCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQ 562
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV----FESMEVKDSFTYSSMVHNLCKAK 356
M G + +N +++ G ++ + E V D+ TY++++ C
Sbjct: 563 EMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRN 622
Query: 357 RLPSASKLLLSCLKSGV 373
+ + +K+ GV
Sbjct: 623 SMNTTTKIYKRMRNQGV 639
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 134/265 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ D +L+ MR+ G+ +V YNS++ G + + ++ L+ EM G
Sbjct: 474 LIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG 533
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD +Y +++ +LG D+A+++ Q+M+ L P TFN+++NG C ++
Sbjct: 534 IDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGD 593
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + + G VP+ +TYN L+K C + T I K + + G AP++ TY ++K
Sbjct: 594 RLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGH 653
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R K + M KGY Y +I F K ++ EA + E+M G+ D
Sbjct: 654 CKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADG 713
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDE 266
YN +++ +EG +E L DE
Sbjct: 714 EIYNFFVDMCYEEGDVEITLNLCDE 738
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 156/332 (46%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + Q + + M G+ PD VTY +LI + + + L +EM++MG
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMG 463
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++ +Y +L+ L + G+ D AN + +M L +N M+NG+CK + A+
Sbjct: 464 MTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAI 523
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + ++ G P+ +TY +I C+ G + A +L+E+ D G P +T+ +M
Sbjct: 524 KLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGF 583
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ G +L M KG D Y T++ + T ++M GV D
Sbjct: 584 CMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDS 643
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN LI +CK L+ A+ L EM ++G+ ++ LI K I AR E
Sbjct: 644 NTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEE 703
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
M G ++ E YN VD ++G ++ +N+
Sbjct: 704 MRGHGLVADGEIYNFFVDMCYEEGDVEITLNL 735
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 174/364 (47%), Gaps = 10/364 (2%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P+ + ++ LS + LLD++L G+ V S N+ L ++ E +
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAF---LSRIANNSEGIEM 244
Query: 89 FQDMICG-DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
+ C ++ T ++NI++ LC+ A R+ + P++V+Y+ +I G C
Sbjct: 245 AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYC 304
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
G L+ A ++ ++ G PN TY +I+ + K ++L M + D
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV 364
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y T+I F K+G ++ A + ++M++ + D ++Y TLI + + GK+ L EM
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
+G + D+ T+T LID CKAG + A LH E M ++G N+ Y ++D L K G+
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNE-MVQMGMTPNIVTYGALIDGLCKHGE 483
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+D A + + M K + Y+SMV+ +CKA + A KL+ +G+
Sbjct: 484 LDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTT 543
Query: 383 VVDG 386
V+D
Sbjct: 544 VIDA 547
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 80/193 (41%), Gaps = 35/193 (18%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ +C + G +L M E GI PD +TYN+L+ + ++ + + M
Sbjct: 578 VLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQ 637
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD + T+NI++ G CK R A
Sbjct: 638 GVAPD-----------------------------------SNTYNILIKGHCKARNLKEA 662
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + + G+VP + +YN LIK K ++ AR + +E+ G + Y +
Sbjct: 663 WFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDM 722
Query: 181 CFRNRKYKLGLEI 193
C+ ++ L +
Sbjct: 723 CYEEGDVEITLNL 735
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 107/237 (45%), Gaps = 11/237 (4%)
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFG-----YCTVIAAFVKIGRLKEATDYMEQMVTDG 236
F N K ++G+++ R YT+ +G + V+IG L EA ++++++ G
Sbjct: 161 FLNSKLEIGVKMTQFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYG 220
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
+ + + S N ++ E + + + G + ++ I+I LC+ G +K A
Sbjct: 221 LVVTVDSCNAFLSRIANNS--EGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAH 278
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
L M+ ++ +Y+ ++D G++ A+ + + M++K + +TY+S++ L
Sbjct: 279 RLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLL 338
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
CK + A K+L + + ++ G G R A K ++ KIS
Sbjct: 339 CKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKIS 395
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 188/400 (47%), Gaps = 4/400 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID + + + + N M + GISPD+ TYN ++ + + + +L +M++ G
Sbjct: 222 VIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKG 281
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD W+YNSL++ G+ EA RV + M + P T N ++ LCK+ +A
Sbjct: 282 VLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDAR 341
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + G ++ +Y I++ G G L + + G AP++ + ++K
Sbjct: 342 DVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAY 401
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ I + M+ +G D Y TVIAA +IG++ +A + QM+ GV I
Sbjct: 402 AKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSI 461
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y+ LI +C G L A L+ +M +G D +I+ LCK G + A+ ++
Sbjct: 462 STYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDF 521
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
IG N+ YN ++D GK+++A+ VF+ M + Y ++V+ CK R
Sbjct: 522 TISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGR 581
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
+ L L G++ + ++ GL +G AK
Sbjct: 582 IDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAK 621
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 185/399 (46%), Gaps = 4/399 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++A C+ + D IL +M + G+ PD TYNSLI G + ++ + +M G
Sbjct: 257 VVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQG 316
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV + NSLM L + GK +A VF M ++ IMLNG +
Sbjct: 317 ILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLT 376
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + G P+ +N+LIK K G L A I E+ + G P+ +TY+T++
Sbjct: 377 ELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAAL 436
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R K +E + M +G Y +I F G L +A D + QM+ G++ DI
Sbjct: 437 CRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDI 496
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+N +IN CK G++ A + D G + + L+DG C G ++ A +
Sbjct: 497 GCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDV 556
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDSFT-YSSMVHNLCKAKR 357
M G N+ Y +V+ K G+ID +++F + +K S T Y+ ++H L +A R
Sbjct: 557 MVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGR 616
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
A +SG+ + + V+ GL + C EA
Sbjct: 617 TVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEA 655
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 180/375 (48%), Gaps = 6/375 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP--PDVWSYNSLMHC 75
+L+RM G PDV +Y ++ + + +LL M E G P+ +YN+++
Sbjct: 166 LLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDG 225
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
F+ G ++A +F +M+ ++P +T+N ++N LCK R D A + R + G +P+
Sbjct: 226 FFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPD 285
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
TYN LI G G+ + A + K++ G P+ +T ++M ++ K K ++
Sbjct: 286 NWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFD 345
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
+M KG D F Y ++ + G L + T+ M++DG+ D +N LI Y K G
Sbjct: 346 SMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCG 405
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
L+ A ++ +EM +QG E D T++ +I LC+ G + A M G ++ Y+
Sbjct: 406 MLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYH 465
Query: 316 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++ G + A ++ M K D ++ +++NLCK R+ A + +
Sbjct: 466 FLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISI 525
Query: 372 GVRILKSAQKAVVDG 386
G+ ++DG
Sbjct: 526 GLHPNVMVYNTLMDG 540
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 158/338 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI AY + D I N MRE G+ PDVVTY+++IA R + +++ ++M++
Sbjct: 396 VLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQ 455
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P + +Y+ L+ G +A + M+ + P FN ++N LCK +A
Sbjct: 456 GVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDA 515
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F G P ++ YN L+ G C G++ A + + +G PN + Y T++
Sbjct: 516 QNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNG 575
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + GL + + KG Y ++ + GR A +M G+ +D
Sbjct: 576 YCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMD 635
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y+ ++ K + A LL E+ + D T I+I G+ + ++ A+
Sbjct: 636 RYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFA 695
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+++ G ++ Y+ ++ L K+G ++ A ++F SME
Sbjct: 696 SISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSME 733
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 129/284 (45%), Gaps = 7/284 (2%)
Query: 97 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 156
L+P T+ I+++ + L F + K G + + + L++GLC+A R A
Sbjct: 104 LSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEAL 163
Query: 157 WI-LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT--FDGFGYCTVI 213
I L + G P+ +Y ++K +RK E+L M G + Y TVI
Sbjct: 164 DILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVI 223
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
F K G + +A D +MV G+ D+ +YN ++N CK ++ A +L +M +G
Sbjct: 224 DGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVL 283
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
D +T+ LI G G K A + M G ++ N ++ L K GKI A +V
Sbjct: 284 PDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDV 343
Query: 334 FESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
F+SM +K D F+Y M++ L ++L L G+
Sbjct: 344 FDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGI 387
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 94/241 (39%), Gaps = 38/241 (15%)
Query: 168 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
+P TY +M CC R + KL L + + G D ++ + R EA D
Sbjct: 105 SPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALD 164
Query: 228 -YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ +M G D+ SY ++ C + K A LL M + G C
Sbjct: 165 ILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLP---------- 214
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
N AYN ++D K+G ++ A ++F M + D
Sbjct: 215 -----------------------NAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDL 251
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 402
TY+ +V+ LCKA+ + A +L + GV +++ G +G +EA ++ K
Sbjct: 252 STYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKK 311
Query: 403 I 403
+
Sbjct: 312 M 312
>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
Length = 1031
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 200/410 (48%), Gaps = 24/410 (5%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
IL+ M + GI D+ TYN +I + + + LL M E+ + PD SYN+L+H F
Sbjct: 286 ILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFF 345
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ--------- 128
GK + A +F M+ L P AT+ +++G C+N TD A R+ +Q
Sbjct: 346 GEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREV 405
Query: 129 -----------KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
G P+++TY+ LI G+CK G + + IL + SG PN + YTT+
Sbjct: 406 SKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTL 465
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + K L+ + R G + + ++ +F + G + EA + + M +
Sbjct: 466 VFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKI 525
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
D+ S+N +I+ YC+ G + A+ + D M + G+ D T+ L+ GLC+ G++ A+
Sbjct: 526 SFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKE 585
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 353
+ Y+ + + + N ++ + K G +D A+++ E M + D++TY+ ++ C
Sbjct: 586 FMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFC 645
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
K ++ A LL L+ G+ A +++GL + G + A + +I
Sbjct: 646 KRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEI 695
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 198/402 (49%), Gaps = 15/402 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID+YCQ + +++ + M G PD+ TY SL+ G + L + + + +LE
Sbjct: 535 IIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKA 594
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
D + N+L+ + + G DEA + + M+ ++ P T T+ I+L+G CK AL
Sbjct: 595 CAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPAL 654
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE-LGDSGHAPNAITYTTIMKC 180
+ + + + G VP+ + Y L+ GL G+++ A ++ +E + G + I Y ++M
Sbjct: 655 ILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNG 714
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + ++ M Y ++ ++K G+L MV +G++ D
Sbjct: 715 YLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPD 774
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEM--EKQGFECDKYTHTI-LIDGLCKAGNIKGARL 297
V+Y LI C+ G +E A L++M E+ G + K+TH I LI+ C+ G+I GA
Sbjct: 775 NVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQ-PKHTHYIALINAKCRVGDIDGAFE 833
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLC 353
E M +G + A + IV L K GK++ AI VF S+ V T+++++H LC
Sbjct: 834 LKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLC 893
Query: 354 KAKRLPSA---SKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 392
K ++ A +L+ SC G+++ ++ GL + C
Sbjct: 894 KEFKIDDAFHLKQLMESC---GLKVDVVTYNVLITGLCNKKC 932
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 159/341 (46%), Gaps = 3/341 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-E 59
+L+D +C+ +L M E G+ PD + Y L+ G + + + E++ +
Sbjct: 639 ILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICK 698
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G+ D +YNS+M+ + G+ +E R+ ++M ++ P +A++NI+++G K
Sbjct: 699 EGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSR 758
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE--LGDSGHAPNAITYTTI 177
L ++R + K G P+ VTY +LI GLC+ G + A L++ L +SG P Y +
Sbjct: 759 TLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIAL 818
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ R E+ MK G +++ K G+++EA ++ G+
Sbjct: 819 INAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGM 878
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
I ++ TL++ CKE K++ A+ L ME G + D T+ +LI GLC I A
Sbjct: 879 VPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALD 938
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
E M G N+ Y + + G + + + +E
Sbjct: 939 LYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIE 979
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 161/344 (46%), Gaps = 7/344 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ + D + +M I PD TY L+ G + + +L LL MLE G
Sbjct: 605 LLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKG 664
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC--GDLTPCTATFNIMLNGLCKNRYTDN 119
+ PD +Y L++ L G+ A+ +FQ++IC G C A +N M+NG K +
Sbjct: 665 LVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIA-YNSMMNGYLKGGQINE 723
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
R+ R + ++ P +YNIL+ G K G+L ++ +++ G P+ +TY ++
Sbjct: 724 IERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIF 783
Query: 180 CCFRNRKYKLGLEILSAM--KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
++ ++ L M + G Y +I A ++G + A + E M GV
Sbjct: 784 GLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGV 843
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
V+ ++++ CK GK+E A ++ + + G T T L+ GLCK I A
Sbjct: 844 VPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDA-F 902
Query: 298 HL-EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
HL + M G ++ YN ++ L I A++++E M+ K
Sbjct: 903 HLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSK 946
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 178/407 (43%), Gaps = 40/407 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ IL+RM+++G+ P+ V Y +L+ + +L ++ G
Sbjct: 430 LINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSG 489
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ + +N+L+ ++ G EA + Q M ++ A+FN +++ C+ A
Sbjct: 490 LVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAF 549
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + +HG+ P++ TY L++GLC+ G L A+
Sbjct: 550 SVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAK------------------------- 584
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
E + + K D T++ K G L EA D E+MVT + D
Sbjct: 585 ----------EFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDT 634
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLE 300
+Y L++ +CK GK+ A +LL M ++G D +T L++GL G +K A + E
Sbjct: 635 YTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQE 694
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAK 356
+ K G ++ AYN +++ K G+I+ + +M + S +Y+ ++H K
Sbjct: 695 IICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKG 754
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+L L +K G++ + ++ GL G A K K+
Sbjct: 755 QLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKM 801
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 167/375 (44%), Gaps = 33/375 (8%)
Query: 63 PPDVWSYNSLMHCLFQLGKP-DEANRVFQDMICG---DLTPCTATFNIMLNGLCKNRYTD 118
P +++S + L++ + GK D A +F CG L C N ++ G+ K+ Y
Sbjct: 157 PTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALV-GINKSEYV- 214
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
L + L + F ++ T NI++ LC G+L A +L+++ + PNA+TY TI+
Sbjct: 215 -WLFLKESLDRK-FPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNC-RLPNAVTYNTIL 271
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ + K L IL M++ G D + Y +I K+ R A +++M +
Sbjct: 272 NWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLT 331
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D SYNTLI+ + EGK+ A + ++M +Q + T+T LIDG C+ G AR
Sbjct: 332 PDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRV 391
Query: 299 LEYMNKIG--------------------FDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
L M G D ++ Y+ +++ + K G I + M+
Sbjct: 392 LYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQ 451
Query: 339 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
+ ++ Y+++V CKA A K + +SG+ A++ G
Sbjct: 452 KSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIA 511
Query: 395 EAKKIQSKIRMAKIS 409
EA++ + + KIS
Sbjct: 512 EAEQFKQYMSRMKIS 526
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 177/385 (45%), Gaps = 46/385 (11%)
Query: 50 SLDLLDEMLEM-GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 108
+L +LD +++ G+ Y +H L Q P +A V + + + C+A F+ +L
Sbjct: 91 ALRMLDSIVQQSGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTGFS-CSAIFSSLL 149
Query: 109 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
+ + T+ L + ++L+ K G++ A + + + G
Sbjct: 150 RTISRCDPTN-----------------LFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFK 192
Query: 169 PNAITYTTIMKCCFR-NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
+ + I+ N+ + L + ++ RK + D V+ + G+L +A
Sbjct: 193 ASLFSCNNILNALVGINKSEYVWLFLKESLDRK-FPLDVTTCNIVLNSLCTQGKLSKAES 251
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
+++M + + V+YNT++N Y K+G+ ++A +LD+MEK G E D YT+ I+ID LC
Sbjct: 252 MLQKMKNCRLP-NAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLC 310
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDSF- 343
K A L L+ M ++ + +YN ++ +GKI+ AI +F M +K S
Sbjct: 311 KLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVA 370
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR---ILKSAQ-----------------KAV 383
TY++++ C+ R A ++L +GVR + K+ Q A+
Sbjct: 371 TYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSAL 430
Query: 384 VDGLRHSGCRREAKKIQSKIRMAKI 408
++G+ G E K+I S+++ + +
Sbjct: 431 INGMCKMGMIHETKEILSRMQKSGV 455
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 118/264 (44%), Gaps = 3/264 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
++ M E + P +YN L+ G + LS +L L +M++ GI PD +Y L+ L
Sbjct: 727 LMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLC 786
Query: 78 QLGKPDEANRVFQDMICGD--LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
+ G + A + + M+ + L P + ++N C+ D A + ++ G VP
Sbjct: 787 EYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPS 846
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
V + +++GLCK G++ A + + +G P T+TT+M + K +
Sbjct: 847 EVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQ 906
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M+ G D Y +I + +A D E+M + G+ +I +Y TL G
Sbjct: 907 LMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATG 966
Query: 256 KLEAAYLLLDEMEKQGFECDKYTH 279
++ LL ++E +G Y H
Sbjct: 967 TMQDGEKLLKDIEDRGI-VPSYKH 989
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 102/203 (50%), Gaps = 2/203 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRM--REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
+LI C++ + L +M E+G+ P Y +LI R + + +L ++M
Sbjct: 780 LLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMK 839
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
+G+ P + +S++ L + GK +EA VF ++ + P ATF +++GLCK D
Sbjct: 840 ALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKID 899
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
+A + + ++ G ++VTYN+LI GLC + A + +E+ G PN TY T+
Sbjct: 900 DAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLT 959
Query: 179 KCCFRNRKYKLGLEILSAMKRKG 201
+ + G ++L ++ +G
Sbjct: 960 GAMYATGTMQDGEKLLKDIEDRG 982
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+A C+ D + + M+ G+ P V +S++ G + + ++ + ++ G
Sbjct: 818 LINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAG 877
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P + ++ +LMH L + K D+A + Q M L T+N+++ GLC + +AL
Sbjct: 878 MVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDAL 937
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP------------ 169
++ ++ G +P + TY L + G ++ +LK++ D G P
Sbjct: 938 DLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSYKHPESLEWRM 997
Query: 170 -NAITYTTIMKCCFRNRKYKLGLEIL 194
NAI ++ C + +K +E+L
Sbjct: 998 ENAIKRLNTIRNCRKGISFKNEVELL 1023
>gi|255561941|ref|XP_002521979.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538783|gb|EEF40383.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 496
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 163/336 (48%), Gaps = 7/336 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + + + IL M +G PDV+TYN ++ G + L ++DLL++M G
Sbjct: 139 LIRGFIKVDQINKAARILKIMVMSGGVPDVITYNMMVGGLCKRGKLKSAIDLLEDMSLSG 198
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PPDV +YN+++ C+F D+A R +++ + P T+ I++ +CK+ T A+
Sbjct: 199 CPPDVVTYNTIIRCMFHNANFDQAVRFWKEQLRRGCPPYLITYTILIELVCKHCGTVRAM 258
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P+LVTYN L+ CK G+ A I+ + G PNAITY T++
Sbjct: 259 EVLEDMAIEGCYPDLVTYNSLVNFTCKQGKYEDAALIIINMLSHGMEPNAITYNTLLHSL 318
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ EIL+ MK + Y T+I K G + A D+ QMV + DI
Sbjct: 319 CSCGLWDEVDEILTVMKETSHPPTVVTYNTLINGLCKSGLVNRAIDFFHQMVYENCLPDI 378
Query: 242 VSYNTLINLYCKE-------GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
V+YNTL+ CKE + E A +L EM K+ + Y + +IDGLC
Sbjct: 379 VTYNTLLGALCKEECWMSPSSQFEDAVEILREMGKRDHRINSYAYRSVIDGLCNNKKTDI 438
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
A LE M + E Y+ +++ L G ++ A
Sbjct: 439 AIQVLEIMISSRCKPDEEIYSALINSLADAGMMEEA 474
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 154/319 (48%), Gaps = 11/319 (3%)
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
G+ +A R+ M P + ++ G K + A R+ + + G VP+++TY
Sbjct: 112 GRLMDAPRLIDVMARRSQIPNFSCCTNLIRGFIKVDQINKAARILKIMVMSGGVPDVITY 171
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
N+++ GLCK G+L++A +L+++ SG P+ +TY TI++C F N + + R
Sbjct: 172 NMMVGGLCKRGKLKSAIDLLEDMSLSGCPPDVVTYNTIIRCMFHNANFDQAVRFWKEQLR 231
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
+G Y +I K A + +E M +G D+V+YN+L+N CK+GK E
Sbjct: 232 RGCPPYLITYTILIELVCKHCGTVRAMEVLEDMAIEGCYPDLVTYNSLVNFTCKQGKYED 291
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A L++ M G E + T+ L+ LC G L M + + YN +++
Sbjct: 292 AALIIINMLSHGMEPNAITYNTLLHSLCSCGLWDEVDEILTVMKETSHPPTVVTYNTLIN 351
Query: 320 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK-------AKRLPSASKLLLSC 368
L K G ++ AI+ F M + D TY++++ LCK + + A ++L
Sbjct: 352 GLCKSGLVNRAIDFFHQMVYENCLPDIVTYNTLLGALCKEECWMSPSSQFEDAVEILREM 411
Query: 369 LKSGVRILKSAQKAVVDGL 387
K RI A ++V+DGL
Sbjct: 412 GKRDHRINSYAYRSVIDGL 430
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 177/370 (47%), Gaps = 17/370 (4%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 112
L+D M P+ +L+ ++ + ++A R+ + M+ P T+N+M+ GLC
Sbjct: 120 LIDVMARRSQIPNFSCCTNLIRGFIKVDQINKAARILKIMVMSGGVPDVITYNMMVGGLC 179
Query: 113 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
K +A+ + + G P++VTYN +I+ + A KE G P I
Sbjct: 180 KRGKLKSAIDLLEDMSLSGCPPDVVTYNTIIRCMFHNANFDQAVRFWKEQLRRGCPPYLI 239
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
TYT +++ ++ +E+L M +G D Y +++ K G+ ++A + M
Sbjct: 240 TYTILIELVCKHCGTVRAMEVLEDMAIEGCYPDLVTYNSLVNFTCKQGKYEDAALIIINM 299
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
++ G++ + ++YNTL++ C G + +L M++ T+ LI+GLCK+G +
Sbjct: 300 LSHGMEPNAITYNTLLHSLCSCGLWDEVDEILTVMKETSHPPTVVTYNTLINGLCKSGLV 359
Query: 293 KGARLHLEYMNKIGFDS---NLEAYNCIVDRLGKD-------GKIDHAINVFESMEVKD- 341
A +++ +++ +++ ++ YN ++ L K+ + + A+ + M +D
Sbjct: 360 NRA---IDFFHQMVYENCLPDIVTYNTLLGALCKEECWMSPSSQFEDAVEILREMGKRDH 416
Query: 342 ---SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
S+ Y S++ LC K+ A ++L + S + + A+++ L +G EA +
Sbjct: 417 RINSYAYRSVIDGLCNNKKTDIAIQVLEIMISSRCKPDEEIYSALINSLADAGMMEEANE 476
Query: 399 IQSKIRMAKI 408
++ K+ K+
Sbjct: 477 LRQKLINIKV 486
>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 178/356 (50%), Gaps = 2/356 (0%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
++++ + PD VTYN+ + +++ +L+ L E E D Y++++H + G+
Sbjct: 301 LKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGR 360
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
D+A + +M P T+ ++NGLC+ R D A +M R + KHG P V+Y
Sbjct: 361 MDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTA 420
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
L+ GLCK G AR ++ + PNAITY+ +M R K +++ M +KG
Sbjct: 421 LLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKG 480
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ +I + + ++ EA +MEQ + +G +++V++ T+I+ +C++ LEAA
Sbjct: 481 FFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAAL 540
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
LLD+M D T+T +ID L K G I+ A M ++G Y ++ +
Sbjct: 541 SLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQY 600
Query: 322 GKDGKIDHAINVFESMEVKDS--FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
+ G+++ + + E M + Y+ ++ LC L A KLL L++ +I
Sbjct: 601 CRMGRVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKI 656
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 177/360 (49%), Gaps = 5/360 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L M + I + ++ +R L ++ +L M + GI PD+ N+ +H L
Sbjct: 156 VLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLV 215
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ D+A R + M ++ P T+N ++ G C ++A+ + + G P+ +
Sbjct: 216 MGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKI 275
Query: 138 TYNILIKGLCKAGRLRTARWIL-KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+Y ++ LCK R++ R ++ K L DS P+ +TY T + ++ LE L
Sbjct: 276 SYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLRE 335
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
+ + + D GY ++ +F + GR+ +A + + +M + G D+V+Y ++IN C+E K
Sbjct: 336 AEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERK 395
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
++ A +L +M K G + + ++T L++GLCK GN AR + + + N Y+
Sbjct: 396 VDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSV 455
Query: 317 IVDRLGKDGKIDHAINVFESMEVKDSFTYSS----MVHNLCKAKRLPSASKLLLSCLKSG 372
++ ++GK A ++ M K F ++ +LC+ +++ A + + CL +G
Sbjct: 456 LMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNG 515
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 181/387 (46%), Gaps = 9/387 (2%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
D L RM+ I P+V+TYN LI G L +++L+ EM G PD SY +
Sbjct: 220 LDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYT 279
Query: 72 LMHCLFQLGKPDEANRVFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+M L + + E + + M+ +L P T+N ++ L K+ + D AL R ++
Sbjct: 280 VMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEER 339
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
F + V Y+ ++ C+ GR+ A+ I+ E+ G P+ +TYT+++ + RK
Sbjct: 340 RFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQA 399
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
++L M + G + Y ++ K G EA + M D + ++Y+ L++
Sbjct: 400 KKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHG 459
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+ +EGK A L+ EM K+GF +LI LC+ + A+ +E G N
Sbjct: 460 FRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVN 519
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
+ + ++ + ++ A+++ + M + D TY++++ L K R+ A+KL +
Sbjct: 520 VVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAM 579
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCR 393
L+ G+ + V+ H CR
Sbjct: 580 KMLRVGLIPTPVTYRTVI----HQYCR 602
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 153/295 (51%), Gaps = 4/295 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ ++C+ D I+N M G PDVVTY S+I G + + + +L +M + G
Sbjct: 351 IVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHG 410
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD-LTPCTATFNIMLNGLCKNRYTDNA 120
P+ SY +L++ L + G EA R +M D P T++++++G + + A
Sbjct: 411 CKPNTVSYTALLNGLCKNGNSLEA-REMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEA 469
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ R + K GF P V N+LI+ LC+ ++ A+ +++ ++G A N + +TT++
Sbjct: 470 CDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHG 529
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + L +L M D Y T+I A K GR++EAT +M+ G+
Sbjct: 530 FCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPT 589
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
V+Y T+I+ YC+ G++E LL++M + EC + + +I+ LC GN++ A
Sbjct: 590 PVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQ-EC-RTAYNQVIEKLCSFGNLEQA 642
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 130/282 (46%), Gaps = 32/282 (11%)
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
NA+R+ +QK G P+L N I L RL A L+ + PN ITY ++
Sbjct: 187 NAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLI 246
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
K + + +E+++ M KG + D Y TV+ K R+KE ME+M+ D
Sbjct: 247 KGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNL 306
Query: 239 L-DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
L D V+YNT +++ K G + A L E E++ F DK ++ ++ C+ G + A+
Sbjct: 307 LPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAK- 365
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKR 357
E +N++ F + D TY+S+++ LC+ ++
Sbjct: 366 --EIVNEM----------------------------FSKGCIPDVVTYTSVINGLCQERK 395
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ A K+L K G + + A+++GL +G EA+++
Sbjct: 396 VDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREM 437
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 117/277 (42%), Gaps = 39/277 (14%)
Query: 120 ALRMFRGLQKHG-FVPELVTYNILIKGLCKAGRLRTARWILKELGDS--GHAPNAITYTT 176
ALR F + + + + Y +++ L K + A+ +L+ + P A Y
Sbjct: 117 ALRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGY-- 174
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
+M R K + + +L+ M++ G D T I V RL +A ++E+M
Sbjct: 175 VMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVE 234
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
++ ++++YN LI YC +LE A L+ EM +G DK ++ ++ LCK IK R
Sbjct: 235 IEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVR 294
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAK 356
L +E M K DSNL + D TY++ VH L K
Sbjct: 295 LLMEKMLK---DSNL---------------------------LPDQVTYNTFVHMLSKHG 324
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 393
A + L + R+ K A+V HS CR
Sbjct: 325 HGDEALEFLREAEERRFRVDKVGYSAIV----HSFCR 357
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + CQ D + + G + +VV + ++I G + L +L LLD+M
Sbjct: 490 LLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLS 549
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV +Y +++ L + G+ +EA ++ M+ L P T+ +++ C+ ++
Sbjct: 550 NKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDL 609
Query: 121 LRMFRGLQKHGFVPELVT-YNILIKGLCKAGRLRTARWIL 159
L++ L+K E T YN +I+ LC G L A +L
Sbjct: 610 LKL---LEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLL 646
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 103/270 (38%), Gaps = 13/270 (4%)
Query: 106 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
++LN +R F G + P L++ +C+ LR+A W K G+
Sbjct: 41 MVLNSFTGGYRQTEGIRRFEGGEDESRHP-------LVREICRLIELRSA-WNPKLEGEL 92
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-YTFDGFGYCTVIAAFVKIGRLKE 224
H ++ + ++ L R+ Y D Y ++ K +
Sbjct: 93 RHLLRSLKPRQVCAVLQLQTDERVALRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQG 152
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A + M ++ ++ ++ Y + GKL A +L M+K G E D I
Sbjct: 153 AKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIH 212
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 340
L + A LE M + + N+ YNC++ +++ A+ + M K
Sbjct: 213 VLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSP 272
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
D +Y +++ LCK KR+ L+ LK
Sbjct: 273 DKISYYTVMGFLCKEKRIKEVRLLMEKMLK 302
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 196/410 (47%), Gaps = 15/410 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C+ D+ + + MR GI PD L++ R L + + L+E+
Sbjct: 114 LLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCY 173
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI + YN+L++ L + DEA +F++ + P +FNI++ GLC+ D A
Sbjct: 174 GIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKA 233
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE-LGDSGHAPNAITYTTIMK 179
F+ + G P++V+YN LI G C+ + +LKE + G +P+ ITYT+I+
Sbjct: 234 FEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIIS 293
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ K E+ M G + F + +I F K+G ++ A E+M+ G
Sbjct: 294 GYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLP 353
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+V++ +LI+ YC+EG++ L +EM+ + + YT+ +LI+ LCK I+ AR L
Sbjct: 354 DVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFL 413
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
++ YN ++D K GK+D A + M+ K D T++ ++ C
Sbjct: 414 RHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMK 473
Query: 356 KRLPSASKLL-----LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 400
R+ A ++C+ + I +++ L +G EA +I+
Sbjct: 474 GRMVEAISTFYKMIEINCVPDEITI-----NSLISCLLKAGMPNEASQIK 518
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 180/380 (47%), Gaps = 40/380 (10%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
TY+ L+ + L + + D M GI PD L+ ++GK D A ++
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
C + +N +LN L K D A+ +FR + FVP++ ++NILI+GLC+ G +
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
A + +G+ G P+ ++Y T++ G+C
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLIN----------------------------GFC-- 260
Query: 213 IAAFVKIGRLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
++ + + D + E M+ GV D+++Y ++I+ YCK G ++AA L DEM G
Sbjct: 261 -----RVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSG 315
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
+ + +T +LIDG K GN++ A + E M +G ++ + ++D ++G+++ +
Sbjct: 316 IKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGL 375
Query: 332 NVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
++E M+V++ +TY+ +++ LCK R+ A L S V V+DG
Sbjct: 376 KLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGF 435
Query: 388 RHSGCRREAKKIQSKIRMAK 407
+G EA I ++++ K
Sbjct: 436 CKAGKVDEANFIVAEMQEKK 455
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 181/398 (45%), Gaps = 37/398 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +Y + D+ LN + GI YN+L+ + +L+ ++ L E LE
Sbjct: 149 LLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEP 208
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK-NRYTDN 119
PDV+S+N L+ L ++G+ D+A FQ+M P ++N ++NG C+ N +
Sbjct: 209 YFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKG 268
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN--------- 170
+ + G P+++TY +I G CK G ++ A + E+ SG PN
Sbjct: 269 HDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLID 328
Query: 171 --------------------------AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
+T+T+++ R + GL++ MK + +
Sbjct: 329 GFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSP 388
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ + Y +I A K R++EA +++ + + V YN +I+ +CK GK++ A ++
Sbjct: 389 NVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIV 448
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
EM+++ DK T TILI G C G + A M +I + N ++ L K
Sbjct: 449 AEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKA 508
Query: 325 GKIDHAINVFESMEVKDSFTYSSMVHNLC-KAKRLPSA 361
G + A + ++ K + SS+ L K+ R+P+A
Sbjct: 509 GMPNEASQIKQAALQKLNLGLSSLGSPLTRKSSRVPAA 546
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 192/407 (47%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ YC+F D + ++ M+ G+ P+ Y S+I R L+ + + EM+ G
Sbjct: 730 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 789
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD Y +L+ + G A++ F +M D+TP T+ +++G C+ A
Sbjct: 790 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 849
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + G P+ VT+ LI G CKAG ++ A + + +G +PN +TYTT++
Sbjct: 850 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 909
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ E+L M + G + F Y +++ K G ++EA + + G+ D
Sbjct: 910 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 969
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y TL++ YCK G+++ A +L EM +G + T +L++G C G ++ L +
Sbjct: 970 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 1029
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G N +N +V + + A +++ M + D TY ++V CKA+
Sbjct: 1030 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 1089
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A L G + S ++ G EA+++ ++R
Sbjct: 1090 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 1136
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 181/388 (46%), Gaps = 8/388 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C+ + M GI PD V Y +LI G + + + EM
Sbjct: 765 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 824
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV +Y +++ Q+G EA ++F +M C L P + TF ++NG CK + +A
Sbjct: 825 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 884
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + + G P +VTY LI GLCK G L +A +L E+ G PN TY +I+
Sbjct: 885 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 944
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + ++++ + G D Y T++ A+ K G + +A + +++M+ G+Q I
Sbjct: 945 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 1004
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++N L+N +C G LE LL+ M +G + T L+ C N+K A +
Sbjct: 1005 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 1064
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G + + Y +V K + A +F+ M+ K TYS ++ K K+
Sbjct: 1065 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 1124
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVD 385
A ++ + G+ +A K + D
Sbjct: 1125 FLEAREVFDQMRREGL----AADKEIFD 1148
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 174/356 (48%), Gaps = 4/356 (1%)
Query: 48 SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 107
+ ++ + E E+G+ +V SYN ++H + QLG+ EA+ + M TP +++ +
Sbjct: 671 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 730
Query: 108 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 167
+NG C+ D ++ +++ G P Y +I LC+ +L A E+ G
Sbjct: 731 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 790
Query: 168 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
P+ + YTT++ + + + M + T D Y +I+ F +IG + EA
Sbjct: 791 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 850
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
+M G++ D V++ LIN YCK G ++ A+ + + M + G + T+T LIDGLC
Sbjct: 851 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 910
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSF 343
K G++ A L M KIG N+ YN IV+ L K G I+ A+ + E D+
Sbjct: 911 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 970
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
TY++++ CK+ + A ++L L G++ +++G G + +K+
Sbjct: 971 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 1026
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 178/377 (47%), Gaps = 4/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I CQ + +L M G +PDV++Y++++ G R L L++ M
Sbjct: 694 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 753
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ + Y S++ L ++ K EA F +MI + P T + +++G CK A
Sbjct: 754 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 813
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ F + P+++TY +I G C+ G + A + E+ G P+++T+T ++
Sbjct: 814 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 873
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + + M + G + + Y T+I K G L A + + +M G+Q +
Sbjct: 874 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 933
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I +YN+++N CK G +E A L+ E E G D T+T L+D CK+G + A+ L+
Sbjct: 934 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 993
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G + +N +++ G ++ + M K ++ T++S+V C
Sbjct: 994 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 1053
Query: 357 RLPSASKLLLSCLKSGV 373
L +A+ + GV
Sbjct: 1054 NLKAATAIYKDMCSRGV 1070
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 157/337 (46%), Gaps = 37/337 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC+ + + N M +AG SP+VVTY +LI G + L + +LL EM ++G
Sbjct: 870 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 929
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++++YNS+++ L + G +EA ++ + L T T+ +++ CK+ D A
Sbjct: 930 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 989
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-C 180
+ + + G P +VT+N+L+ G C G L +L + G APNA T+ +++K
Sbjct: 990 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 1049
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C RN LK AT + M + GV D
Sbjct: 1050 CIRNN------------------------------------LKAATAIYKDMCSRGVGPD 1073
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y L+ +CK ++ A+ L EM+ +GF T+++LI G K AR +
Sbjct: 1074 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 1133
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M + G ++ E ++ D K + D ++ + +
Sbjct: 1134 QMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 1170
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 177/382 (46%), Gaps = 44/382 (11%)
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY-T 117
+ G P V ++ L G EA RVF+ M+ L + N+ L L K+ Y T
Sbjct: 613 DWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 670
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
A+ +FR + G + +YNI+I +C+ GR++ A +L + G+ P+ I+Y+T+
Sbjct: 671 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 730
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ R + +++ MKRKG + + Y ++I +I +L EA + +M+ G+
Sbjct: 731 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 790
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK---------------------------- 269
D V Y TLI+ +CK G + AA EM
Sbjct: 791 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 850
Query: 270 -------QGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRL 321
+G E D T T LI+G CKAG++K A R+H +M + G N+ Y ++D L
Sbjct: 851 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH-NHMIQAGCSPNVVTYTTLIDGL 909
Query: 322 GKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
K+G +D A + M + FTY+S+V+ LCK+ + A KL+ +G+
Sbjct: 910 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 969
Query: 378 SAQKAVVDGLRHSGCRREAKKI 399
++D SG +A++I
Sbjct: 970 VTYTTLMDAYCKSGEMDKAQEI 991
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 40/188 (21%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ +C + G +LN M GI+P+ T+NSL+ + L + + +M
Sbjct: 1009 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 1068
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD GK T+ ++ G CK R A
Sbjct: 1069 GVGPD--------------GK---------------------TYENLVKGHCKARNMKEA 1093
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ ++ GF + TY++LIKG K + AR + ++ G A + +
Sbjct: 1094 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD----- 1148
Query: 181 CFRNRKYK 188
F + KYK
Sbjct: 1149 FFSDTKYK 1156
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 177/354 (50%), Gaps = 20/354 (5%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M GI PDV T+N LI + + ++ +++EM G+ PD ++ +LM + G
Sbjct: 184 MVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGN 243
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL----------------RMFR 125
D A RV + M+ T N++++G CK + AL ++
Sbjct: 244 MDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYN 303
Query: 126 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 185
++ G P+ TYN+LI LC G+L+ A +L+E+ SG A N ITY T++ +N+
Sbjct: 304 EMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNK 363
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
K + EI M+ +G + + Y T+I K R++EA M+QM+ +G++ D +YN
Sbjct: 364 KIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYN 423
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
+++ +C+EG ++ A ++ M G E D T+ LI GLCKAG ++ A L +
Sbjct: 424 SMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLK 483
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
G AYN ++ L K + A+ +F ME K D+FTY + L +
Sbjct: 484 GMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNS 537
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 192/404 (47%), Gaps = 24/404 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMR-EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
+ ID+Y +F ++ I+ M E G++ D + YN L+ + L ++ M+
Sbjct: 127 IFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVS 186
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
GI PDV ++N L+ L + + A V ++M L P TF ++ G + D
Sbjct: 187 KGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDG 246
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A R+ + G VT N+L+ G CK GR+ A + E+ + G
Sbjct: 247 AFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEG------------- 293
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
K+ + +E+ + MK KG D F Y +I + G+L+EA + +M G
Sbjct: 294 ------KHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCAR 347
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
++++YNTLI+ +CK K+E A + D+ME QG + T+ LIDGLCK+ ++ A +
Sbjct: 348 NVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLM 407
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKA 355
+ M G + YN ++ ++G I A ++ ++M D TY +++ LCKA
Sbjct: 408 DQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKA 467
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
R+ AS+LL S G+ + A V+ L +EA ++
Sbjct: 468 GRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRL 511
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 139/297 (46%), Gaps = 5/297 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLID+ C +L M +G + +V+TYN+LI G +N + + ++ D+M
Sbjct: 319 MLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQ 378
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + +YN+L+ L + + EA ++ MI L P T+N ML C+ A
Sbjct: 379 GLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKA 438
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + +G P++VTY LI GLCKAGR+ A +L+ + G Y +++
Sbjct: 439 ADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQA 498
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI-GRLKEATDYMEQMVTDGVQL 239
F+ ++ K + + M+ KG T D F Y V G + EA D++ +M+ G
Sbjct: 499 LFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLP 558
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLD-EMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
+ S+ L C + L+D MEK F ++ ++I G K + A
Sbjct: 559 EFSSFYMLAEGLCSLSMEDTLIKLVDLVMEKANFSQNE---VVMIRGFLKIRKFQDA 612
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 153/328 (46%), Gaps = 5/328 (1%)
Query: 48 SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 107
+ +++L +EM G PD ++YN L+ L GK EA + ++M T+N +
Sbjct: 296 TMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTL 355
Query: 108 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 167
++G CKN+ + A +F ++ G VTYN LI GLCK+ R++ A ++ ++ G
Sbjct: 356 IDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGL 415
Query: 168 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
P+ TY +++ R + +I+ M G D Y T+I K GR++ A+
Sbjct: 416 KPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASR 475
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
+ + G+ L +YN +I K + + A L EME++G D +T+ I+ GL
Sbjct: 476 LLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLS 535
Query: 288 KAGNIKGARLH--LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTY 345
+G G + +E + K GF ++ + + L D I + + + K +F+
Sbjct: 536 NSGGPIGEAVDFVIEMIEK-GFLPEFSSFYMLAEGLCSLSMEDTLIKLVDLVMEKANFSQ 594
Query: 346 SS--MVHNLCKAKRLPSASKLLLSCLKS 371
+ M+ K ++ A L L S
Sbjct: 595 NEVVMIRGFLKIRKFQDALATLGGLLDS 622
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 134/309 (43%), Gaps = 58/309 (18%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
T +N +LN L + + G P++ T+NILIK LCKA ++R A +++
Sbjct: 158 TLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVME 217
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
E+ G P+ T+T T++ F++ G
Sbjct: 218 EMSSYGLVPDEKTFT-----------------------------------TLMQGFIEEG 242
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
+ A EQM+ G + V+ N L++ +CKEG++E A +DEM +G HT
Sbjct: 243 NMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEG------KHT 296
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV- 339
+ I+ L+ E NK G + YN ++D L GK+ A+ + ME+
Sbjct: 297 MAIE------------LYNEMKNK-GCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEIS 343
Query: 340 ---KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
++ TY++++ CK K++ A ++ G+ ++DGL S +EA
Sbjct: 344 GCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEA 403
Query: 397 KKIQSKIRM 405
++ ++ M
Sbjct: 404 AQLMDQMIM 412
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 140/340 (41%), Gaps = 27/340 (7%)
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH-GFVPELVTYNILIKGLCKAGR 151
+ + TP +L+ L + ALR+ K F P Y +++ L K G
Sbjct: 48 LSSNFTPAQ-----LLDTLRRQNDETAALRLLSWASKQPNFRPNSSIYEEILRKLGKVGS 102
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK-GYTFDGFGYC 210
+ + IL+E+ + + + Y+ L I+ M+ + G D Y
Sbjct: 103 FNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYN 162
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
++ V +LK + MV+ G++ D+ ++N LI CK ++ A L+++EM
Sbjct: 163 FLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSY 222
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG----------------FDSNLEAY 314
G D+ T T L+ G + GN+ GA E M G + +E
Sbjct: 223 GLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEA 282
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
+D + +GK AI ++ M+ K D FTY+ ++ +LC +L A LL
Sbjct: 283 LSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEI 342
Query: 371 SGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
SG ++DG + EA++I ++ + +S
Sbjct: 343 SGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSR 382
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 196/410 (47%), Gaps = 15/410 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C+ D+ + + MR GI PD L++ R L + + L+E+
Sbjct: 114 LLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCY 173
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI + YN+L++ L + DEA +F++ + P +FNI++ GLC+ D A
Sbjct: 174 GIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKA 233
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE-LGDSGHAPNAITYTTIMK 179
F+ + G P++V+YN LI G C+ + +LKE + G +P+ ITYT+I+
Sbjct: 234 FEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIIS 293
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ K E+ M G + F + +I F K+G ++ A E+M+ G
Sbjct: 294 GYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLP 353
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+V++ +LI+ YC+EG++ L +EM+ + + YT+ +LI+ LCK I+ AR L
Sbjct: 354 DVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFL 413
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
++ YN ++D K GK+D A + M+ K D T++ ++ C
Sbjct: 414 RHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMK 473
Query: 356 KRLPSASKLL-----LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 400
R+ A ++C+ + I +++ L +G EA +I+
Sbjct: 474 GRMVEAISTFYKMIEINCVPDEITI-----NSLISCLLKAGMPNEASQIK 518
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 180/380 (47%), Gaps = 40/380 (10%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
TY+ L+ + L + + D M GI PD L+ ++GK D A ++
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
C + +N +LN L K D A+ +FR + FVP++ ++NILI+GLC+ G +
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
A + +G+ G P+ ++Y T++ G+C
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLIN----------------------------GFC-- 260
Query: 213 IAAFVKIGRLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
++ + + D + E M+ GV D+++Y ++I+ YCK G ++AA L DEM G
Sbjct: 261 -----RVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSG 315
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
+ + +T +LIDG K GN++ A + E M +G ++ + ++D ++G+++ +
Sbjct: 316 IKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGL 375
Query: 332 NVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
++E M+V++ +TY+ +++ LCK R+ A L S V V+DG
Sbjct: 376 KLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGF 435
Query: 388 RHSGCRREAKKIQSKIRMAK 407
+G EA I ++++ K
Sbjct: 436 CKAGKVDEANFIVAEMQEKK 455
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 180/398 (45%), Gaps = 37/398 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +Y + D+ LN + GI YN+L+ + +L+ ++ L E LE
Sbjct: 149 LLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEP 208
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK-NRYTDN 119
PDV+S+N L+ L ++G+ D+A FQ+M P ++N ++NG C+ N +
Sbjct: 209 YFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKG 268
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN--------- 170
+ + G P+++TY +I G CK G ++ A + E+ SG PN
Sbjct: 269 HDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLID 328
Query: 171 --------------------------AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
+T+T+++ R + GL++ MK + +
Sbjct: 329 GFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSP 388
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ + Y +I A K R++EA +++ + + V YN +I+ +CK GK++ A ++
Sbjct: 389 NVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIV 448
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
EM+++ DK T TILI G C G + A M +I + N ++ L K
Sbjct: 449 AEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKA 508
Query: 325 GKIDHAINVFESMEVKDSFTYSSMVHNLC-KAKRLPSA 361
G + A + ++ K + SS+ L K+ R+P A
Sbjct: 509 GMPNEASQIKQAALQKLNLGLSSLGSPLTRKSSRVPVA 546
>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
Length = 796
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 178/356 (50%), Gaps = 2/356 (0%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
++++ + PD VTYN+ + +++ +L+ L E E D Y++++H + G+
Sbjct: 364 LKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGR 423
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
D+A + +M P T+ ++NGLC+ R D A +M R + KHG P V+Y
Sbjct: 424 MDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTA 483
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
L+ GLCK G AR ++ + PNAITY+ +M R K +++ M +KG
Sbjct: 484 LLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKG 543
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ +I + + ++ EA +MEQ + +G +++V++ T+I+ +C++ LEAA
Sbjct: 544 FFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAAL 603
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
LLD+M D T+T +ID L K G I+ A M ++G Y ++ +
Sbjct: 604 SLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQY 663
Query: 322 GKDGKIDHAINVFESMEVKDS--FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
+ G+++ + + E M + Y+ ++ LC L A KLL L++ +I
Sbjct: 664 CRMGRVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKI 719
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 174/349 (49%), Gaps = 7/349 (2%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P+ Y ++ +R L ++ +L M + GI PD+ N+ +H L + D+A R
Sbjct: 232 PEAFGY--VMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRF 289
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
+ M ++ P T+N ++ G C ++A+ + + G P+ ++Y ++ LCK
Sbjct: 290 LERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCK 349
Query: 149 AGRLRTARWIL-KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
R++ R ++ K L DS P+ +TY T + ++ LE L + + + D
Sbjct: 350 EKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKV 409
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
GY ++ +F + GR+ +A + + +M + G D+V+Y ++IN C+E K++ A +L +M
Sbjct: 410 GYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQM 469
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
K G + + ++T L++GLCK GN AR + + + N Y+ ++ ++GK
Sbjct: 470 YKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKS 529
Query: 328 DHAINVFESMEVKDSFTYSS----MVHNLCKAKRLPSASKLLLSCLKSG 372
A ++ M K F ++ +LC+ +++ A + + CL +G
Sbjct: 530 SEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNG 578
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 181/387 (46%), Gaps = 9/387 (2%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
D L RM+ I P+V+TYN LI G L +++L+ EM G PD SY +
Sbjct: 283 LDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYT 342
Query: 72 LMHCLFQLGKPDEANRVFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+M L + + E + + M+ +L P T+N ++ L K+ + D AL R ++
Sbjct: 343 VMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEER 402
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
F + V Y+ ++ C+ GR+ A+ I+ E+ G P+ +TYT+++ + RK
Sbjct: 403 RFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQA 462
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
++L M + G + Y ++ K G EA + M D + ++Y+ L++
Sbjct: 463 KKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHG 522
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+ +EGK A L+ EM K+GF +LI LC+ + A+ +E G N
Sbjct: 523 FRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVN 582
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLL 366
+ + ++ + ++ A+++ + M + D TY++++ L K R+ A+KL +
Sbjct: 583 VVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAM 642
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCR 393
L+ G+ + V+ H CR
Sbjct: 643 KMLRVGLIPTPVTYRTVI----HQYCR 665
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 153/295 (51%), Gaps = 4/295 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ ++C+ D I+N M G PDVVTY S+I G + + + +L +M + G
Sbjct: 414 IVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHG 473
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD-LTPCTATFNIMLNGLCKNRYTDNA 120
P+ SY +L++ L + G EA R +M D P T++++++G + + A
Sbjct: 474 CKPNTVSYTALLNGLCKNGNSLEA-REMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEA 532
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ R + K GF P V N+LI+ LC+ ++ A+ +++ ++G A N + +TT++
Sbjct: 533 CDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHG 592
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + L +L M D Y T+I A K GR++EAT +M+ G+
Sbjct: 593 FCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPT 652
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
V+Y T+I+ YC+ G++E LL++M + EC + + +I+ LC GN++ A
Sbjct: 653 PVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQ-EC-RTAYNQVIEKLCSFGNLEQA 705
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 130/277 (46%), Gaps = 7/277 (2%)
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN-AITYTTIMKCCFRNRKY 187
+H + + ++ +AG+LR A +L + +G P+ +I T I NR
Sbjct: 225 RHDPIRRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLD 284
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
K + L M+ + Y +I + + RL++A + + +M G D +SY T+
Sbjct: 285 K-AVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTV 343
Query: 248 INLYCKEGKLEAAYLLLDEMEKQG-FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
+ CKE +++ LL+++M K D+ T+ + L K G+ A L +
Sbjct: 344 MGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERR 403
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 362
F + Y+ IV ++G++D A + M K D TY+S+++ LC+ +++ A
Sbjct: 404 FRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAK 463
Query: 363 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
K+L K G + + A+++GL +G EA+++
Sbjct: 464 KMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREM 500
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + CQ D + + G + +VV + ++I G + L +L LLD+M
Sbjct: 553 LLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLS 612
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV +Y +++ L + G+ +EA ++ M+ L P T+ +++ C+ ++
Sbjct: 613 NKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDL 672
Query: 121 LRMFRGLQKHGFVPELVT-YNILIKGLCKAGRLRTARWIL 159
L++ L+K E T YN +I+ LC G L A +L
Sbjct: 673 LKL---LEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLL 709
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 190/411 (46%), Gaps = 4/411 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ A C+ + L +M G+ PD TYN+LI G + ++ + EM
Sbjct: 264 VVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 323
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV + N LM L + GK EA VF M P ++ IMLNG +
Sbjct: 324 ILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMT 383
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + G P++ T+++LIK G L A I E+ D G P+ +TYTT++
Sbjct: 384 DLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAAL 443
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R K +E + M +G D + Y +I F G L +A + + +++ +G++LDI
Sbjct: 444 CRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDI 503
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V ++++IN CK G++ A + D G D +++L+DG C G ++ A +
Sbjct: 504 VFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDA 563
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G + N+ Y +V+ K G+ID +++F M K + Y+ ++ L A R
Sbjct: 564 MVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGR 623
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
A +SG+ I K V+ G + C EA + ++R +
Sbjct: 624 TVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNV 674
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 183/377 (48%), Gaps = 4/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
ML+ + C++ + + M G +PDV +Y ++ G L DL D ML
Sbjct: 333 MLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGD 392
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD+++++ L+ G D+A +F +M + P T+ ++ LC+ D+A
Sbjct: 393 GIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDA 452
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ F + G P+ Y+ LI+G C G L A+ ++ E+ ++G + + +++I+
Sbjct: 453 MEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINN 512
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + I G D Y ++ + +G++++A + MV+ G++ +
Sbjct: 513 LCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 572
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V Y TL+N YCK G+++ L EM ++G + + I+IDGL AG A++
Sbjct: 573 VVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFH 632
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE---SMEVK-DSFTYSSMVHNLCKAK 356
M + G N YN ++ K+ D AI +F+ +M VK D T ++M+ + + +
Sbjct: 633 EMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTR 692
Query: 357 RLPSASKLLLSCLKSGV 373
R+ A L S +SG+
Sbjct: 693 RVEEAKDLFASISRSGL 709
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 173/371 (46%), Gaps = 7/371 (1%)
Query: 2 LIDAYCQFVSFDAGYTIL-NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L+ +C+ D IL +R E G PDV +Y+ L+ + DLL M E
Sbjct: 156 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 215
Query: 61 GI--PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G PDV +Y +++ C F+ G ++A +F++M+ + P T++ +++ LCK R
Sbjct: 216 GAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMG 275
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A R + G +P+ TYN LI G G+ + A + KE+ P+ +T +M
Sbjct: 276 KAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLM 335
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ K K ++ M KG D F Y ++ + G L + TD + M+ DG+
Sbjct: 336 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIA 395
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
DI +++ LI Y G L+ A ++ +EM G + D T+T +I LC+ G + A
Sbjct: 396 PDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEK 455
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHNLCK 354
M G + AY+C++ G + A + + + D +SS+++NLCK
Sbjct: 456 FNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCK 515
Query: 355 AKRLPSASKLL 365
R+ A +
Sbjct: 516 LGRIMDAQNIF 526
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 169/384 (44%), Gaps = 42/384 (10%)
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P +Y LM C + +P+ A F ++ L N +L G C+ + TD AL
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 170
Query: 122 R-MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH--APNAITYTTIM 178
+ + G VP++ +Y+IL+K LC G+ A +L+ + + G +P+ + YTT++
Sbjct: 171 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVI 230
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
C F+ ++ M ++G D Y +V+ A K + +A ++ QMV GV
Sbjct: 231 DCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVL 290
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D +YN LI Y G+ + A + EM + D T +L+ LCK G IK AR
Sbjct: 291 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDV 350
Query: 299 LEYMNKIGFDSNLEAY----------NCIVDR-----------LGKD------------- 324
+ M G + ++ +Y C+VD + D
Sbjct: 351 FDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYAN 410
Query: 325 -GKIDHAINVFESME---VK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
G +D A+ +F M VK D TY++++ LC+ ++ A + + GV K A
Sbjct: 411 CGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 470
Query: 380 QKAVVDGLRHSGCRREAKKIQSKI 403
++ G G +AK++ +I
Sbjct: 471 YHCLIQGFCTHGSLLKAKELILEI 494
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
ML+D YC + + + M AGI P+VV Y +L+ G + + L L EML+
Sbjct: 543 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQK 602
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P YN ++ LF G+ A F +M + T+NI+L G KNR D A
Sbjct: 603 GIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEA 662
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+ +F+ L+ +++T N +I G+ + R+ A+ + + SG P +T
Sbjct: 663 IFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 108/248 (43%), Gaps = 42/248 (16%)
Query: 168 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
+P + TY +M CC R + +L L FG
Sbjct: 112 SPTSHTYAILMDCCTRAHRPELALAF-------------FG------------------- 139
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKL-EAAYLLLDEMEKQGFECDKYTHTILIDGL 286
Q++ G+++DI+ N L+ +C+ + EA +LL + G D ++++IL+ L
Sbjct: 140 ---QLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSL 196
Query: 287 CKAGNIKGARLHLEYMNKIGF--DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 340
C G A L M + G ++ AY ++D K+G ++ A ++F+ M +
Sbjct: 197 CDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPP 256
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 400
D TYSS+VH LCKA+ + A L + GV ++ G +G +EA ++
Sbjct: 257 DLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVF 316
Query: 401 SKIRMAKI 408
++R I
Sbjct: 317 KEMRRHSI 324
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 195/437 (44%), Gaps = 39/437 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ + D Y + M + GI P+VVTY ++I G + ++ + + +M++ G
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +YN L+H +GK E R+ ++M L P T+ +LN LC N A
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F + + G P + Y ILI G G L +L + ++G +P+ + I
Sbjct: 329 FFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT--------------- 226
+ + I + MK++G + D + +I A K+GR+ +A
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI 448
Query: 227 --------------------DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
++ +M+ G++ D+V +NT++ C +G++ A L+D
Sbjct: 449 FVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDL 508
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
ME+ G D ++T LI G C G I A L+ M +G + YN ++ + G+
Sbjct: 509 MERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGR 568
Query: 327 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
ID A VF M TYS+++H L +R A +L L+ + SG +
Sbjct: 569 IDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNI 628
Query: 383 VVDGLRHSGCRREAKKI 399
+++GL + C EA K+
Sbjct: 629 ILNGLSKNNCVDEAFKL 645
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 174/364 (47%), Gaps = 7/364 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE---MGIPPDVWSYNSLMH 74
++ RM E G +PDVV+YN+L+ G +L+LL M + PP+V SY ++++
Sbjct: 152 LIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVIN 211
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
F G+ D+A +F +M+ + P T+ +++GLCK + D A +F+ + G P
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
+ TYN LI G G+ + +L+E+ G P+ TY +++ N + +
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFF 331
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
+M RKG + Y +I + G L E D + MV +G+ D +N + Y K+
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
++ A + ++M++QG D LID LCK G + A L M G N+ +
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVF 451
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
N +V L K + A + M + D +++++ NLC ++ A +L+ +
Sbjct: 452 NSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMER 511
Query: 371 SGVR 374
G R
Sbjct: 512 VGTR 515
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 189/407 (46%), Gaps = 4/407 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI Y + + +LN M E G+SPD +N + + +++ ++ + ++M +
Sbjct: 348 ILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQ 407
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV ++ +L+ L +LG+ D+A F M+ + P FN ++ GLC + A
Sbjct: 408 GLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKA 467
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P++V +N ++ LC G++ A+ ++ + G P+ I+YTT++
Sbjct: 468 KEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGG 527
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + L M G D + Y T++ + + GR+ +A +M+ +G+
Sbjct: 528 HCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPG 587
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+Y+T+++ + A L M G + + + + I+++GL K + A +
Sbjct: 588 VVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQ 647
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ F + +N ++ L K G+ + A+++F ++ V D FTY + NL +
Sbjct: 648 SLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEG 707
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L L + KSG A+V L H G A SK+
Sbjct: 708 YLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKL 754
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 150/340 (44%), Gaps = 4/340 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C ++ M GI PDVV +N+++ + + L+D M +G
Sbjct: 454 LVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVG 513
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
PDV SY +L+ HCL +G+ DEA + M+ L P T+N +L+G C+ D+
Sbjct: 514 TRPDVISYTTLIGGHCL--VGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDD 571
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +FR + ++G P +VTY+ ++ GL R A+ + + SG N Y I+
Sbjct: 572 AYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILN 631
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+N ++ ++ K + + + +I A K GR ++A + + G+
Sbjct: 632 GLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVP 691
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+ +Y + +EG LE L MEK G + L+ L G+I A +L
Sbjct: 692 DVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYL 751
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
+++ F ++ L +D HA ++ E V
Sbjct: 752 SKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYRV 791
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 176/396 (44%), Gaps = 29/396 (7%)
Query: 23 REAGISPDVVTYNSLIAGATRNSLLSC--SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
R + +S + +I R+ L +L L D +L P + ++N L+ + ++
Sbjct: 4 RVSAVSNRCLELERVIGSRARSGSLGLDDALKLFDGLLTHARPASIIAFNHLLTAVSRVS 63
Query: 81 -------KPDEANRVFQDMI--CG-DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+ + +F MI C +TP T++I++ C+ ++ F + K
Sbjct: 64 GRRSSTTESELVVSLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKS 123
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWIL-KELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G+ + N L+KGLC A RLR A IL K + + G P+ ++Y T++K ++ +
Sbjct: 124 GWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEE 183
Query: 190 GLEILSAM---KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
LE+L M + + + Y TVI F G++ +A + +M+ G+Q ++V+Y T
Sbjct: 184 ALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTT 243
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
+I+ CK ++ A + +M +G + D T+ LI G G K LE M+ G
Sbjct: 244 VIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHG 303
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 362
+ Y +++ L +G+ A F+SM K + Y ++H L
Sbjct: 304 LKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMH 363
Query: 363 KLLLSCLKSGVR---------ILKSAQKAVVDGLRH 389
LL +++G+ A+KA++D H
Sbjct: 364 DLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMH 399
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 184/369 (49%), Gaps = 7/369 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ +L M+ AGI+P +VT+ SLI + +L + +M++M
Sbjct: 58 LIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMK 117
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD + Y ++ L ++ K D A F+ M+ P T+ ++++ L K +
Sbjct: 118 VKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGH 177
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + G PELVTY ++ G CKAGR+ A +++ L +G +P+ Y+T++
Sbjct: 178 QIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGL 237
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ ++ E+ G D Y + I+ K G+L EA +M+ G D
Sbjct: 238 CKHDRHDEARELFEMA--AGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDP 295
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
VSYN +I CK+ ++ A L+D+ ++ T+L+DGLCK+ ++ A + LE
Sbjct: 296 VSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILER 355
Query: 302 MNKIGFDS-NLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + G + ++ Y+ ++D L K ++D A V + M V D TY++++ CK
Sbjct: 356 MLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVG 415
Query: 357 RLPSASKLL 365
RL A +L
Sbjct: 416 RLDEARELF 424
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 158/305 (51%), Gaps = 7/305 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM- 60
+++ YC+ D +++ R++ G SP Y++LI G ++ D E+ EM
Sbjct: 198 VVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHD----RHDEARELFEMA 253
Query: 61 -GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G DV Y S + L + GK DEA V MI P ++N+++ LCK+
Sbjct: 254 AGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSE 313
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG-HAPNAITYTTIM 178
A + + +P + +L+ GLCK+ R+ A IL+ + ++G AP+ +TY+ ++
Sbjct: 314 AKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVI 373
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ + +L M+R G D Y +I AF K+GRL EA + ++M G
Sbjct: 374 DGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCA 433
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
LD+V+YN LI YC+ K++ A +++EM +G + + + + ++DGLCK ++ ARL
Sbjct: 434 LDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLL 493
Query: 299 LEYMN 303
+E MN
Sbjct: 494 MEKMN 498
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 192/372 (51%), Gaps = 11/372 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I C+ D + RM ++G PD VTY L+ + + +EML
Sbjct: 127 VVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSK 186
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P++ +Y ++++ + G+ D+A + + + +P + ++ +++GLCK+ D A
Sbjct: 187 GHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEA 246
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F G V +++ Y I GLCKAG+L A+ + ++ ++G AP+ ++Y I+
Sbjct: 247 RELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYS 304
Query: 181 CFRNRKYKLGLEIL-SAMKRKGYTFDGFGYCTVIA-AFVKIGRLKEATDYMEQMVTDGVQ 238
++ + E++ AM+RK G CTV+ K R++EA +E+M+ G +
Sbjct: 305 LCKDNRVSEAKELMDQAMERK--CMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDR 362
Query: 239 L-DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+V+Y+ +I+ CK +L+ AY++L +M + G D T+T +ID CK G + AR
Sbjct: 363 APSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARE 422
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 353
+ M++ G ++ AYN ++ + K+D AI + E M + + + S++V LC
Sbjct: 423 LFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLC 482
Query: 354 KAKRLPSASKLL 365
K R+ A L+
Sbjct: 483 KESRVEEARLLM 494
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 179/376 (47%), Gaps = 7/376 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
PD TY +LI G + + +++LL EM GI P + ++ SL+ L +L D+A ++
Sbjct: 50 PDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQI 109
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
F MI + P + +++ LCK D A F + + G +P+ VTY +L+ L K
Sbjct: 110 FHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFK 169
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
A + I +E+ GH+P +TY T++ + + L ++ +K G + G
Sbjct: 170 ACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSL 229
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y T+I K R EA + E M VQ D++ Y + I+ CK GKL+ A + +M
Sbjct: 230 YSTLIDGLCKHDRHDEARELFE-MAAGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMI 287
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
+ G D ++ ++I LCK + A+ ++ + + +VD L K +++
Sbjct: 288 EAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVE 347
Query: 329 HAINVFESM-EVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
A + E M E D TYS+++ LCKA RL A +L ++G A+
Sbjct: 348 EACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAI 407
Query: 384 VDGLRHSGCRREAKKI 399
+D G EA+++
Sbjct: 408 IDAFCKVGRLDEAREL 423
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 175/405 (43%), Gaps = 69/405 (17%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ D I ++M + + PD Y +I + + L + + M++ G
Sbjct: 93 LIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSG 152
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +Y L+H LF+ K ++ +++F++M+ +P T+ ++NG CK D AL
Sbjct: 153 CLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQAL 212
Query: 122 RMFR-------------------GLQKH--------------GFVPELVTYNILIKGLCK 148
+ R GL KH G V +++ Y I GLCK
Sbjct: 213 SLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAAGDVQDVIVYTSFISGLCK 272
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL-SAMKRK------- 200
AG+L A+ + ++ ++G AP+ ++Y I+ ++ + E++ AM+RK
Sbjct: 273 AGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPV 332
Query: 201 -GYTFDGF---------------------------GYCTVIAAFVKIGRLKEATDYMEQM 232
DG Y VI K RL +A +++M
Sbjct: 333 CTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKM 392
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
G D+V+Y +I+ +CK G+L+ A L M ++G D + ILI G C+A +
Sbjct: 393 RRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKV 452
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
A +E M G N+ + + IVD L K+ +++ A + E M
Sbjct: 453 DEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 149/331 (45%), Gaps = 6/331 (1%)
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G + ++ NSL+ G EA RVF+D + P T+ ++ G CK A
Sbjct: 12 GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + ++ G P +VT+ LI+ LC+ A I ++ D P+A YT ++
Sbjct: 72 VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K L M + G D Y ++ + K + ++ E+M++ G +
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+Y T++N YCK G+++ A L+ ++ G ++ LIDGLCK AR E
Sbjct: 192 LVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE 251
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHNLCKAK 356
G ++ Y + L K GK+D A + + E+ D +Y+ ++++LCK
Sbjct: 252 M--AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDN 309
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
R+ A +L+ ++ +VDGL
Sbjct: 310 RVSEAKELMDQAMERKCMPGVPVCTVLVDGL 340
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 82/200 (41%), Gaps = 4/200 (2%)
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
A R G+ + + +++ FV G +EA + + + D +Y TLI +CK
Sbjct: 7 AKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAE 66
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
++ A LL EM+ G T LI LC+ A M + + Y
Sbjct: 67 QIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYT 126
Query: 316 CIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++ L K K+D A + FE M + D TY+ +VH+L KA + ++ L
Sbjct: 127 VVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSK 186
Query: 372 GVRILKSAQKAVVDGLRHSG 391
G VV+G +G
Sbjct: 187 GHSPELVTYATVVNGYCKAG 206
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 179/366 (48%), Gaps = 5/366 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ YC +A IL M+ I PD TY SLI+G + L + + +EM++ G
Sbjct: 262 IVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKG 321
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P YN+L+ G D A+ +M+ ++P +T+N +++ L + TD A
Sbjct: 322 LRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAE 381
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + +Q+ G P+ +TYNILI G C+ + A + E+ SG P TYT+++
Sbjct: 382 CMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVL 441
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + K ++ + +G D + +I +K A + ++ M V D
Sbjct: 442 SKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDE 501
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++NT++ +C+EGK+E A L DEM+++G + D + LI G + G+IK A
Sbjct: 502 VTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNE 561
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M GF+ + YN +V L K+ + D A + + M K D TY +++ + K
Sbjct: 562 MLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKV-N 620
Query: 358 LPSASK 363
+P +K
Sbjct: 621 IPDENK 626
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 196/406 (48%), Gaps = 14/406 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ + M +G+ P++VTYN+++ G + + + +L M
Sbjct: 226 IMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQ 285
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PD ++Y SL+ + + G+ +EA+++F++M+ L P +N +++G C D A
Sbjct: 286 KIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMA 345
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM-- 178
+ K G P + TYN LI L R A ++KE+ + G +P+AITY ++
Sbjct: 346 SAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILING 405
Query: 179 --KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
+C + + L E+L++ G Y +++ K R+KEA D +++ ++G
Sbjct: 406 YCRCANAKKAFLLHDEMLAS----GIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEG 461
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
V D + +N LI+ +C ++ A+ LL +M++ D+ T ++ G C+ G ++ AR
Sbjct: 462 VLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEAR 521
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMVHN 351
+ M + G + ++N ++ + G I A V M + F TY+++V
Sbjct: 522 ELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEM-LDTGFNPTVLTYNALVQG 580
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
LCK + A +LL + G+ + +++G+ E K
Sbjct: 581 LCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENK 626
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 186/406 (45%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + C D + M+E G+ P + T NSL++ + + + L EM +
Sbjct: 157 LIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLR 216
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I V+++N +++ L + GK +A M + P T+N +++G C + + A
Sbjct: 217 IKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAAD 276
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ +++ P+ TY LI G+CK GRL A I +E+ G P+A+ Y T++
Sbjct: 277 AILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ M +KG + Y ++I A R EA ++++ G+ D
Sbjct: 337 CNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDA 396
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN LIN YC+ + A+LL DEM G + K T+T L+ L K +K A +
Sbjct: 397 ITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKK 456
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G + +N ++D + + A + + M+ D T+++++ C+ +
Sbjct: 457 ITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGK 516
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ A +L + G++ + ++ G G ++A ++++++
Sbjct: 517 VEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEM 562
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 190/383 (49%), Gaps = 11/383 (2%)
Query: 30 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 89
D +++ I A R L L+ M + I P ++ + GKPD+A ++F
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 90 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
+M A+FN +L+ LCK++ + A +FR L+ F + VTYN+++ G C
Sbjct: 150 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLI 208
Query: 150 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 209
R A +LKE+ + G PN TY T++K FR + + E MK++ D Y
Sbjct: 209 KRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 268
Query: 210 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
TV+ F G +K A + ++M+ +GV + +YN +I + CK+ +E A ++ +EM +
Sbjct: 269 TTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVR 328
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 329
+G+E + T+ +LI GL AG ++ M G + N + YN ++ + +++
Sbjct: 329 RGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEK 388
Query: 330 AINVFESMEVKDSF----TYSSMVHNLCKAKR---LPSASKLLLSCLKSGVRILKSAQKA 382
A+ +FE M D TY+ ++ + KR + A KLLL ++ G K
Sbjct: 389 ALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNR 448
Query: 383 VVDGLRHSGCRREAKKI---QSK 402
V++GL +G + AK+I QSK
Sbjct: 449 VLNGLLLTGNQAFAKEILRLQSK 471
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 151/309 (48%), Gaps = 6/309 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D C+ + Y + +R S D VTYN ++ G +L++L EM+E G
Sbjct: 167 ILDVLCKSKRVEKAYELFRALR-GRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERG 225
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P++ +YN+++ F+ G+ A F +M D T+ +++G A
Sbjct: 226 INPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRAR 285
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + + G +P + TYN +I+ LCK + A + +E+ G+ PN TY +++
Sbjct: 286 NVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL 345
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F ++ G E++ M+ +G + Y +I + + +++A E+M + ++
Sbjct: 346 FHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNL 405
Query: 242 VSYNTLIN-LYCK---EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+YN LI+ ++ + E + A LLL EM ++GF K+T +++GL GN A+
Sbjct: 406 DTYNILISGMFVRKRSEDMVVAGKLLL-EMVERGFIPRKFTFNRVLNGLLLTGNQAFAKE 464
Query: 298 HLEYMNKIG 306
L +K G
Sbjct: 465 ILRLQSKSG 473
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 96/213 (45%), Gaps = 3/213 (1%)
Query: 30 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 89
DVVTY +++ G + + ++ DEM+ G+ P V +YN+++ L + + A +F
Sbjct: 264 DVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMF 323
Query: 90 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
++M+ P T+N+++ GL + + ++ G P TYN++I+ +
Sbjct: 324 EEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSEC 383
Query: 150 GRLRTARWILKELGDSGHAPNAITYTTIMKCCF---RNRKYKLGLEILSAMKRKGYTFDG 206
+ A + +++G PN TY ++ F R+ + ++L M +G+
Sbjct: 384 SEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRK 443
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
F + V+ + G A + + G +L
Sbjct: 444 FTFNRVLNGLLLTGNQAFAKEILRLQSKSGSRL 476
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 184/406 (45%), Gaps = 39/406 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+AYC A L + AG++PD Y S + G R +L+ + + M G
Sbjct: 78 LINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRG 137
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
++Y +L+H L G EA VF M P T + M++GLC+ T+ A
Sbjct: 138 CLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAE 197
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ +GF P +V YN LI G C AG + A + + + + +PN TYT ++
Sbjct: 198 VLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIH-- 255
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
G C K G+++ A +MV G++ ++
Sbjct: 256 --------------------------GLC-------KSGKVERAMVLFSRMVEAGLEPNV 282
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y LI C EG L+ A+ LL ME G + +T ++LID LCK ++ A+L L
Sbjct: 283 VTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGS 342
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ K G N Y ++D L K GKID A + + M V D+ +YSS++ LC+ K+
Sbjct: 343 LVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKK 402
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L A+ +L ++ G++ ++D L KKI K+
Sbjct: 403 LSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 177/400 (44%), Gaps = 16/400 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC + + M SP+V TY LI G ++ + ++ L M+E G
Sbjct: 218 LIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAG 277
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V +Y +L+ G A R+ M L P TF+++++ LCK + A
Sbjct: 278 LEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQ 337
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
L K G V Y LI GLCK G++ A +++++ G P+A +Y++++
Sbjct: 338 LFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGL 397
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R +K +L M KG Y +I V+ + ++M+ G+ DI
Sbjct: 398 CRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDI 457
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y + YC+EG++E A ++ +M +G + T+ LI G G + A E
Sbjct: 458 VTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEV 517
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----------------SFTY 345
M G+ N ++Y ++ + K D+++++++ ++KD + Y
Sbjct: 518 MVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIY 577
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 385
S + LC+ RL A + + + + +++D
Sbjct: 578 SCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 150/325 (46%), Gaps = 6/325 (1%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G P++V YN+LI G + +L + + M P+V +Y L+H L + GK + A
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+F M+ L P T+ ++ G C + A R+ ++ +G VP T+++LI
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCK ++ A+ L L G N + YT+++ + K E++ M +G+ D
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y ++I + +L +AT +E M+ G+Q V+Y +I+ +E E + D
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFD 446
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+M G D T+T+ + C+ G ++ A + M G NL YN ++ G
Sbjct: 447 KMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLG 506
Query: 326 KIDHAINVFESMEVK------DSFT 344
+ A + FE M K DS+T
Sbjct: 507 LVSQAFSTFEVMVGKGWKPNEDSYT 531
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 142/305 (46%), Gaps = 4/305 (1%)
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
T+ ++N C A + L G P+ Y + G C+AG L A + +
Sbjct: 74 TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
G A TYT ++ + + + M+ D Y T++ + GR
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
+EA +E+ +++G + +IV YN LI+ YC G++E A + + M+ + T+T L
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 338
I GLCK+G ++ A + M + G + N+ Y ++ +G + A + ME
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGL 313
Query: 339 VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
V + +T+S ++ LCK +++ A L S +K GV++ + +++DGL +G A +
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373
Query: 399 IQSKI 403
+ K+
Sbjct: 374 LMQKM 378
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 130/296 (43%), Gaps = 12/296 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDA C+ + L + + G+ + V Y SLI G + + + +L+ +M+
Sbjct: 322 VLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISE 381
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD SY+SL+ L + K +A + +DM+ + T+ I+++ L + ++
Sbjct: 382 GFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGP 441
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F + G P++VTY + ++ C+ GR+ A ++ ++ D G PN +TY T+++
Sbjct: 442 KKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRG 501
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV------------KIGRLKEATDY 228
M KG+ + Y ++ V KI +K+
Sbjct: 502 YANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVL 561
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
+E + + L Y+ I C+ +LE A M+ + +T +ID
Sbjct: 562 LEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 93/193 (48%), Gaps = 12/193 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID + V + I ++M GI+PD+VTY + + + ++ +M++
Sbjct: 427 IIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDR 486
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P++ +YN+L+ LG +A F+ M+ P ++ ++L + K +DN+
Sbjct: 487 GVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNS 546
Query: 121 LRMFR--GLQKHGFVPELVT----------YNILIKGLCKAGRLRTARWILKELGDSGHA 168
+ +++ ++ + E +T Y+ I+ LC+ RL A+ + ++
Sbjct: 547 VDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLT 606
Query: 169 PNAITYTTIMKCC 181
P+ YT+I+ CC
Sbjct: 607 PSEDVYTSIIDCC 619
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 4/175 (2%)
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
ME + + ++ +Y TLIN YC G + AA L + G D Y +T + G C+
Sbjct: 60 MESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCR 119
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 344
AG + A M G Y ++ L G + A+ VF M D+
Sbjct: 120 AGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHV 179
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
Y++MVH LC+A R A LL + +G A++DG ++G A K+
Sbjct: 180 YATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKV 234
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 171/330 (51%), Gaps = 1/330 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ + +M++ + P+++ YN++I G + L+ + L EM+E G
Sbjct: 181 IINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENG 240
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNA 120
I DV+SYNS++H +G+ A ++ +M+ G + P TFNI+++GLCK A
Sbjct: 241 IELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEA 300
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K G+ P++V+YN L+ G C +G + A+ + ++ + PN I+Y T++
Sbjct: 301 YNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLING 360
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ R + +L+ M K D Y ++ K GR D +E M G D
Sbjct: 361 YCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPAD 420
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++YN L++ Y K K + A L + + G + T+ IL+DGLCK+G +K A+ +
Sbjct: 421 LITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQ 480
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
++ G N+ YN ++ L K+G +D A
Sbjct: 481 LLSAKGCQPNIRTYNIMIHGLCKEGFLDEA 510
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 191/389 (49%), Gaps = 7/389 (1%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
YTIL + I P ++T++ LI + + + LL +L+MG DV +LM
Sbjct: 92 YTILQS--KPTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKG 149
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
L G+ EA + + + + ++NGLCK T +A++MF ++K P
Sbjct: 150 LCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPN 209
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
L+ YN +I GLCK G + A + E+ ++G + +Y +++ +++ +++L
Sbjct: 210 LIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLD 269
Query: 196 AMKRKGYTF-DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
M +G + D + + +I K+GR+ EA + + M+ G + DIVSYN L+N YC
Sbjct: 270 EMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLS 329
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
G + A + D+M ++ + ++ LI+G CK + A + L M+ + Y
Sbjct: 330 GSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTY 389
Query: 315 NCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
NC++D L K G+ + ++ E+M + D TY+ ++ + K ++ A L ++
Sbjct: 390 NCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIE 449
Query: 371 SGVRILKSAQKAVVDGLRHSGCRREAKKI 399
G+ ++DGL SG + AK+I
Sbjct: 450 IGISPNIRTYNILLDGLCKSGRLKYAKEI 478
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 194/408 (47%), Gaps = 5/408 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+A+ Q +++L + + G DV +L+ G + ++ LL E ++
Sbjct: 110 ILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDR 169
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D Y ++++ L ++GK +A ++F M + P +N +++GLCK D A
Sbjct: 170 GFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEA 229
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA-PNAITYTTIMK 179
+ + ++G ++ +YN +I G C GR + A +L E+ G P+ T+ ++
Sbjct: 230 CGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILID 289
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + +++ M ++G+ D Y ++ + G + EA ++MV
Sbjct: 290 GLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALP 349
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+++SY TLIN YCK ++ A +LL EM + D T+ L+DGL K+G +
Sbjct: 350 NVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLV 409
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES-MEVKDSF---TYSSMVHNLCKA 355
E M G ++L YN ++D K K D A+ +F+ +E+ S TY+ ++ LCK+
Sbjct: 410 EAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKS 469
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
RL A ++ G + ++ GL G EA+ + K+
Sbjct: 470 GRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKM 517
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 137/272 (50%), Gaps = 1/272 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+I +C F A +L+ M G + PDV T+N LI G + +S + +++ M++
Sbjct: 251 MIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKR 310
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ SYN+LM+ G EA +VF M+ P ++ ++NG CK R D A
Sbjct: 311 GWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEA 370
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + VP+ VTYN L+ GL K+GR +++ + SG + ITY ++
Sbjct: 371 MVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDD 430
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F++ K+ L + + G + + Y ++ K GRLK A + + + G Q +
Sbjct: 431 YFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPN 490
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I +YN +I+ CKEG L+ A LL +M +
Sbjct: 491 IRTYNIMIHGLCKEGFLDEAEALLYKMVNNNY 522
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 158/329 (48%), Gaps = 6/329 (1%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+N L+ L +L + + ++ + + P TF+I++N + A + +
Sbjct: 72 FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
K GF ++ L+KGLC GR+ A +L E D G + + Y TI+ + K
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
+ +++ MK+ + Y TVI K G + EA +MV +G++LD+ SYN++
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251
Query: 248 INLYCKEGKLEAAYLLLDEMEKQG-FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
I+ +C G+ +AA LLDEM +G D YT ILIDGLCK G + A + M K G
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRG 311
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSAS 362
+ ++ +YN +++ G + A VF+ M + + +Y ++++ CK + + A
Sbjct: 312 WKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAM 371
Query: 363 KLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
LL + ++DGL SG
Sbjct: 372 VLLTEMHNKNLVPDTVTYNCLLDGLSKSG 400
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 100/178 (56%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC+ D +L M + PD VTYN L+ G +++ DL++ M G
Sbjct: 357 LINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASG 416
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P D+ +YN L+ F+ K D+A +FQ +I ++P T+NI+L+GLCK+ A
Sbjct: 417 QPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAK 476
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+F+ L G P + TYNI+I GLCK G L A +L ++ ++ + PN IT+ TI++
Sbjct: 477 EIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVR 534
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 123/248 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ Y ++ M + G PD+V+YN+L+ G + + + + D+M+E
Sbjct: 286 ILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVER 345
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+V SY +L++ ++ DEA + +M +L P T T+N +L+GL K+ +
Sbjct: 346 TALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYE 405
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++ G +L+TYN+L+ K + A + + + + G +PN TY ++
Sbjct: 406 WDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDG 465
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ + K EI + KG + Y +I K G L EA + +MV + +
Sbjct: 466 LCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPN 525
Query: 241 IVSYNTLI 248
++++T++
Sbjct: 526 YITFDTIV 533
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 72/131 (54%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
+ ++ MR +G D++TYN L+ ++ +L L ++E+GI P++ +YN L+
Sbjct: 406 WDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDG 465
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
L + G+ A +FQ + P T+NIM++GLCK + D A + + + ++P
Sbjct: 466 LCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPN 525
Query: 136 LVTYNILIKGL 146
+T++ +++ +
Sbjct: 526 YITFDTIVRAI 536
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 57/111 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D Y + FD + + E GISP++ TYN L+ G ++ L + ++ +
Sbjct: 426 VLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAK 485
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 111
G P++ +YN ++H L + G DEA + M+ + P TF+ ++ +
Sbjct: 486 GCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAI 536
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 206/459 (44%), Gaps = 77/459 (16%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM--GIPPDVWSYNSLMHC 75
+L+RM E G+ PD ++YN+++ +S +LDLL M++ G P+V +YN+++H
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
LF+ G+ +A +F +M+ + P T+ +++ LCK R D A + R + +GF P
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296
Query: 136 LVTYNILIKG-----------------------------------LCKAGRLRTARWILK 160
VTYN +I G LCK G+ + A
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFD 356
Query: 161 ELGDSGHAPNAITYTTIM-----KCCFRN-----------------RKYKLGLE------ 192
+ GH PN +TY+ ++ + CF + R + + ++
Sbjct: 357 SMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRG 416
Query: 193 -------ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
I + M+ +G D Y VIAAF ++GRL +A D QM+ G++ + + Y+
Sbjct: 417 MMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYH 476
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT-HTILIDGLCKAGNIKGARLHLEYMNK 304
+LI +C G L A L+ EM +G +I+ LCK G + A +++
Sbjct: 477 SLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIH 536
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPS 360
IG ++ +N ++D G GKI+ A V ++M D +Y++++ C+ R+
Sbjct: 537 IGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDD 596
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L L GV+ ++ GL + G AKK+
Sbjct: 597 GLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKM 635
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 194/407 (47%), Gaps = 5/407 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+IDA C+ + D +L +M G P+ VTYN +I G + + + + EM G
Sbjct: 268 IIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQG 327
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++ + NS M L + GK EA F M P T++++L+G + L
Sbjct: 328 LMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDML 387
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ +G V + +NI+I K G + I ++ + G P+A TY ++
Sbjct: 388 NLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAF 447
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV-QLD 240
R + ++ + M G +G Y ++I F G L +A + + +M++ G+ + +
Sbjct: 448 SRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPN 507
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV +N++IN CKEG++ A+ + D + G D T LIDG G I+ A L+
Sbjct: 508 IVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLD 567
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G + ++ +YN ++D ++G+ID + +F M K + TY ++H L
Sbjct: 568 AMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDG 627
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
R A K+ ++SG + S ++ GL + C EA + K+
Sbjct: 628 RTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKL 674
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 154/339 (45%), Gaps = 1/339 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++IDAY + D I +M+E G+ PD TY +IA +R L+ ++D ++M+ M
Sbjct: 407 IVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAM 466
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDN 119
G+ P+ Y+SL+ G +A + +M+ G P FN ++N LCK
Sbjct: 467 GLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVE 526
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +F + G P+++T+N LI G G++ A +L + +G P+ ++Y T++
Sbjct: 527 AHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLID 586
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
RN + GL + M KG Y ++ GR A +M+ G +
Sbjct: 587 GYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTM 646
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DI + ++ C+ + A + ++ + + +ID + K + A+
Sbjct: 647 DISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELF 706
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+ ++ G N Y ++ L K+G ++ A N+F ME
Sbjct: 707 DSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLME 745
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 178/406 (43%), Gaps = 40/406 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ Y F + N M GI D +N +I + ++ ++ + +M E
Sbjct: 372 VLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQ 431
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD +Y ++ ++G+ +A F MI L P ++ ++ G C + A
Sbjct: 432 GVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKA 491
Query: 121 LRMFRGLQKHGFV-PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+ + G P +V +N +I LCK GR+ A I + G P+ IT+ +++
Sbjct: 492 KELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLI- 550
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
DG+G +G++++A ++ M++ G++
Sbjct: 551 -------------------------DGYGL---------VGKIEKAFGVLDAMISAGIEP 576
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+VSYNTLI+ YC+ G+++ +L EM +G + T+ I++ GL G GA+
Sbjct: 577 DVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMC 636
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE---SMEVKDSFT-YSSMVHNLCKA 355
M + G ++ I+ L ++ D AI +F+ +M VK + ++M+ + K
Sbjct: 637 HEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKV 696
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
++ A +L S +G+ S ++ L G EA + S
Sbjct: 697 RKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFS 742
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 123/255 (48%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID Y + + +L+ M AGI PDVV+YN+LI G RN + L L EML G
Sbjct: 549 LIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKG 608
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P +Y ++H LF G+ A ++ +MI T +T I+L GLC+N D A+
Sbjct: 609 VKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAI 668
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
MF+ L + N +I + K + A+ + + +G PNA TY ++K
Sbjct: 669 AMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNL 728
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + S M++ G +I ++ G + +A +YM ++ + L+
Sbjct: 729 LKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEA 788
Query: 242 VSYNTLINLYCKEGK 256
+ + L+ L+ +EGK
Sbjct: 789 STVSLLMALFSREGK 803
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 142/318 (44%), Gaps = 21/318 (6%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGK-------PDEANRVFQDMICGD------LTP 99
L DE+L IP S N L + P A +F + IC + P
Sbjct: 59 LFDELLRQTIPVPERSLNGFFTALARAPSSAACRDGPSLAVALF-NRICREEARPRVALP 117
Query: 100 CTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL-RTARWI 158
T+NI+++ C+ R +F K G +++ +IL+K L A R +
Sbjct: 118 TVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNLL 177
Query: 159 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK--GYTFDGFGYCTVIAAF 216
L + + G P+ I+Y T++K + + + L++L M +K G + + Y TVI
Sbjct: 178 LHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGL 237
Query: 217 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
+ G + +A + +M+ GV D+V+Y ++I+ CK ++ A L+L +M GF+ +K
Sbjct: 238 FREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNK 297
Query: 277 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
T+ +I G +G K M G N+ N + L K GK A F+S
Sbjct: 298 VTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDS 357
Query: 337 MEVK----DSFTYSSMVH 350
M K + TYS ++H
Sbjct: 358 MAAKGHKPNLVTYSVLLH 375
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 144/310 (46%), Gaps = 11/310 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGIS-PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
LI +C + +++ M GI P++V +NS+I + + + D+ D ++ +
Sbjct: 478 LIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHI 537
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV ++NSL+ +GK ++A V MI + P ++N +++G C+N D+
Sbjct: 538 GERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDG 597
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F + G P +TY I++ GL GR A+ + E+ +SG + T I+
Sbjct: 598 LILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGG 657
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
RN + + + F+ T+I A K+ + +EA + + + G+ +
Sbjct: 658 LCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPN 717
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK----YTHTILIDG--LCKAGN--- 291
+Y +I KEG +E A + MEK G Y +L++ + KAGN
Sbjct: 718 ASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMF 777
Query: 292 -IKGARLHLE 300
+ G R+ LE
Sbjct: 778 KVDGKRISLE 787
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 93/232 (40%), Gaps = 38/232 (16%)
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
P TY +M CC R R+ +G + + G D ++ R + +
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176
Query: 229 M-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
+ +M GV+ D +SYNT++ C++ + + A LL M K+ C
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCS------------ 224
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSF 343
N+ YN ++ L ++G++ A N+F M V D
Sbjct: 225 ---------------------PNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVV 263
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
TY+S++ LCKA+ + A +L + +G + K ++ G SG +E
Sbjct: 264 TYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKE 315
>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia seriphioides]
Length = 414
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 152/285 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ + ++ + + + G+ P VV+YN+L++G R L L M
Sbjct: 130 ILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGFRLKSAMHAS 189
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K DEAN +F +M+ L P TF +++G CKN D A
Sbjct: 190 GVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCKNGRVDLA 249
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + +P+L+TYN LI GLCK G L+ A ++ E+ G P+ ITYTT++
Sbjct: 250 MEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDG 309
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + E M ++ D Y +I+ + GR +A + +M++ G + D
Sbjct: 310 CCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGXKPD 369
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y +IN +CK+G + LL EM++ G T+ +L++G
Sbjct: 370 TRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 150/308 (48%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ + + + + D + + G+ P V SYN+
Sbjct: 106 FKLVWGFYQEILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNT 165
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM +LG DE R+ M + P T+++++NGLCK D A +F + G
Sbjct: 166 LMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXG 225
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP VT+ LI G CK GR+ A I K++ P+ ITY T++ + K
Sbjct: 226 LVPXGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAH 285
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
++ M KG D Y T+I K G L A ++ ++M+ + ++LD V+Y LI+
Sbjct: 286 VLIXEMSLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGL 345
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
C+EG+ A +L EM G + D T+T++I+ CK G++ L+ M + G ++
Sbjct: 346 CQEGRSVDAEKMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSV 405
Query: 312 EAYNCIVD 319
YN +++
Sbjct: 406 VTYNVLMN 413
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 140/297 (47%), Gaps = 1/297 (0%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
E+LE G P ++ +N LMH + G A VF + L P ++N +++G +
Sbjct: 115 EILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLG 174
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D R+ + G P++ TY++LI GLCK ++ A + E+ G P +T+T
Sbjct: 175 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFT 234
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T++ +N + L +EI M + D Y T+I K G LK+A + +M
Sbjct: 235 TLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLK 294
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G + D ++Y TLI+ CKEG L+ A+ M ++ D +T LI GLC+ G A
Sbjct: 295 GXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDA 354
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
L M +G + Y I++ K G + + + M+ +D S + +N+
Sbjct: 355 EKMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQ-RDGHVPSVVTYNV 410
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 129/272 (47%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y ++ + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 96 VLEHLMKLKYFKLVWGFYQEILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWG 155
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ ++Y T+M R G + SAM G D + Y +I K ++ EA
Sbjct: 156 LRPSVVSYNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEAN 215
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ V++ TLI+ +CK G+++ A + +M Q D T+ LI GL
Sbjct: 216 ELFDEMLVXGLVPXGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 275
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK GB+K A + + M+ G + Y ++D K+G +D A + M + D
Sbjct: 276 CKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 335
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G +
Sbjct: 336 VAYTALISGLCQEGRSVDAEKMLREMLSVGXK 367
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 196/403 (48%), Gaps = 31/403 (7%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ YC+ +L+ M G+ P+ V YN+LI+ R + L++ M E
Sbjct: 191 ILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMRED 250
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC----GDLTPCTATFNIMLNGLCKNRY 116
G+ PDV ++NS + L GK EA+R+F+DM G P TFN+ML G CK
Sbjct: 251 GLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGM 310
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
+ A + ++++G + EL +YNI + GL + G+L A+ LKE+ D G PN ++ T
Sbjct: 311 LEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNT 370
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
+M +N I+ M G D Y T++ G++ +A + + +M+ G
Sbjct: 371 VMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRG 430
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN----- 291
+ + N L++ KEG++ A LL +M ++ ++ D T I+IDGLCK+G
Sbjct: 431 CSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAV 490
Query: 292 --IKGARLH---------LEYMNKIGFDSN-------LEAYNCIVDRLGKDGKIDHAINV 333
++G +H ++ + SN L Y+ I++ L K G++D A
Sbjct: 491 EIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKK 550
Query: 334 FESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
F M K DS Y + +H+ CK ++ SA ++L K G
Sbjct: 551 FIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRG 593
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 206/430 (47%), Gaps = 30/430 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D C+ I+ M +GI PD VTY++L+ G + + ++L EM+ G
Sbjct: 371 VMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRG 430
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ ++ N L+H L++ G+ EA ++ Q M T NI+++GLCK+ D A+
Sbjct: 431 CSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAV 490
Query: 122 RMFRGLQKHG----------FV-------------PELVTYNILIKGLCKAGRLRTARWI 158
+ G+ HG F+ P+L+TY+I+I GLCKAGRL AR
Sbjct: 491 EIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKK 550
Query: 159 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 218
E+ P++I Y T + ++ K +L M+++G Y ++I
Sbjct: 551 FIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGS 610
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
++ E ++ M G+ +I +YN +I+ C+ G+++ A LLDEM ++G + +
Sbjct: 611 KNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISS 670
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKI-GFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
+LI CKA + + E I G L Y+ + + L G++ A +F++
Sbjct: 671 FRLLIKAFCKASDFGVVKEVFEIALSICGHKEAL--YSLMFNELLIGGEVSEAKELFDAA 728
Query: 338 EVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 393
+ +F Y+ ++ LCK + L +AS +L + G R ++ V+DGL G +
Sbjct: 729 LDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKK 788
Query: 394 REAKKIQSKI 403
+A ++ ++
Sbjct: 789 HDADELAERM 798
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 203/473 (42%), Gaps = 72/473 (15%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGA------------------- 41
M++++ + D+ + M AG+SP+ T N LIAG
Sbjct: 121 MVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVK 180
Query: 42 ----------------TRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
R L +L+LLD M G+ P+ YN+L+ + G+ +EA
Sbjct: 181 GCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEA 240
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV----PELVTYNI 141
R+ + M L P TFN ++ LC A R+FR +Q + P + T+N+
Sbjct: 241 ERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNL 300
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
+++G CK G L A+ +++ + +G+ +Y + RN K L M KG
Sbjct: 301 MLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKG 360
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ + + TV+ K G + +A M M++ G+ D V+Y+TL++ C GK+ A
Sbjct: 361 IEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKAN 420
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+L EM ++G + YT IL+ L K G I A L+ MN+ +D + N ++D L
Sbjct: 421 NILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGL 480
Query: 322 GKDGKIDHAINVFESMEV---------------------------KDSFTYSSMVHNLCK 354
K GK+D A+ + E M + D TYS +++ LCK
Sbjct: 481 CKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCK 540
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
A RL A K + + + + D HS C+ KI S R+ K
Sbjct: 541 AGRLDEARKKFIEMVGKSLH----PDSIIYDTFIHSFCKH--GKISSAFRVLK 587
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 172/349 (49%), Gaps = 8/349 (2%)
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
PP V+ YN ++ + K D + +++DM+ ++P T T N+++ GLC + ++A
Sbjct: 113 PPPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDARE 172
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+F + G P ++ IL++G C+AG A +L +G G PN + Y T++
Sbjct: 173 VFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFC 232
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG----VQ 238
R + + ++ M+ G D + + I+A G++ EA+ M D +
Sbjct: 233 REGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPR 292
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+I ++N ++ +CKEG LE A L++ M++ G + ++ I + GL + G + A+L
Sbjct: 293 PNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLA 352
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
L+ M G + N+ ++N ++D L K+G I A + M D+ TYS+++H C
Sbjct: 353 LKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCS 412
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++ A+ +L ++ G ++ L G EA+K+ K+
Sbjct: 413 TGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKM 461
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 184/409 (44%), Gaps = 28/409 (6%)
Query: 5 AYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP 64
A+ QF SF R + P V YN ++ + R + L +M+ G+ P
Sbjct: 98 AFSQFQSF--------RSQVPANPPPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSP 149
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 124
+ ++ N L+ L G+ ++A VF M P +F I++ G C+ + AL +
Sbjct: 150 ETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELL 209
Query: 125 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT-------- 176
G+ G P V YN LI C+ GR A +++ + + G P+ +T+ +
Sbjct: 210 DGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSA 269
Query: 177 --IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
I++ R ++ E+ + R T + ++ F K G L+EA +E M
Sbjct: 270 GKILEASRIFRDMQIDEEL--GLPRPNIT----TFNLMLEGFCKEGMLEEAKTLVESMKR 323
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
+G +++ SYN + + GKL A L L EM +G E + Y+ ++DGLCK G I
Sbjct: 324 NGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISD 383
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 350
AR+ + M G + Y+ ++ GK+ A N+ M + +++T + ++H
Sbjct: 384 ARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLH 443
Query: 351 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+L K R+ A KLL + + V+DGL SG EA +I
Sbjct: 444 SLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEI 492
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 107/233 (45%), Gaps = 3/233 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
I ++C+ + + +L M + G + + TYNSLI G + + LLD+M E G
Sbjct: 569 FIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKG 628
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P++ +YN+++ CL + G+ +A + +M+ ++P ++F +++ CK
Sbjct: 629 ITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVK 688
Query: 122 RMFR-GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F L G L Y+++ L G + A+ + D Y +++
Sbjct: 689 EVFEIALSICGHKEAL--YSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEK 746
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
++ + +IL M KGY FD + VI K G+ +A + E+M+
Sbjct: 747 LCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERMM 799
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 113/268 (42%), Gaps = 3/268 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ D M + PD + Y++ I ++ +S + +L +M +
Sbjct: 533 IIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKR 592
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G + +YNSL+ L + E + DM +TP T+N M++ LC+ +A
Sbjct: 593 GCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDA 652
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK-ELGDSGHAPNAITYTTIMK 179
+ + + G P + ++ +LIK CKA + + + L GH Y+ +
Sbjct: 653 TSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGH--KEALYSLMFN 710
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ E+ A + + F Y +I K L+ A+D + +M+ G +
Sbjct: 711 ELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRF 770
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEM 267
D S+ +I+ K GK A L + M
Sbjct: 771 DPASFMPVIDGLGKRGKKHDADELAERM 798
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 41/197 (20%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM-- 73
Y +L+ M+E GI+P++ TYN++I+ + + LLDEML+ GI P++ S+ L+
Sbjct: 618 YGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKA 677
Query: 74 ------------------------HCLFQL--------GKPDEANRVFQDMI--CGDLTP 99
L+ L G+ EA +F + C DL
Sbjct: 678 FCKASDFGVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLG- 736
Query: 100 CTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL 159
+N ++ LCK+ +NA + + G+ + ++ +I GL K G+ A +
Sbjct: 737 -NFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELA 795
Query: 160 KELGD---SGHAPNAIT 173
+ + D G N IT
Sbjct: 796 ERMMDMASEGMVENKIT 812
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 205/409 (50%), Gaps = 11/409 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+AYC+ + +L+ ++P+ TY++++ L ++ +LD L+
Sbjct: 144 VLINAYCKSGEIEEALRVLDH---TSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQS 200
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV + L+ + +A ++F +M P T+N+++ G CK D A
Sbjct: 201 KCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEA 260
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + L +G +++++N++++ LC GR A +L + G P+ +T+ ++
Sbjct: 261 IIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILIN- 319
Query: 181 CFRNRKYKLG--LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
F +K LG L +L M + G+T + + +I F + A +++E MV+ G
Sbjct: 320 -FLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCY 378
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
DIV+YN L+ CK+GK++ A ++L ++ +G ++ +IDGL K G + A
Sbjct: 379 PDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVEL 438
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 354
LE M G +L +V L ++GK+ AI F ++ ++F Y+S++ LCK
Sbjct: 439 LEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCK 498
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A++ A L+ + +G + +++ ++ G+ + G EA K+ +++
Sbjct: 499 AQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNEL 547
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 158/353 (44%), Gaps = 7/353 (1%)
Query: 43 RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 102
RN L L+ M G PDV + +L+ ++G+ A R+ +
Sbjct: 81 RNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDAN 140
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
++N+++N CK+ + ALR+ L P TY+ ++ LC G+L+ A +L
Sbjct: 141 SYNVLINAYCKSGEIEEALRV---LDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQ 197
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
S P+ +T T ++ + +++ + M+ KG D Y +I F K GRL
Sbjct: 198 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRL 257
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
EA +++++ + G Q D++S+N ++ C G+ A LL M ++G T IL
Sbjct: 258 DEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNIL 317
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 340
I+ LC+ G + A LE M K G N ++N ++ ID AI E M +
Sbjct: 318 INFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGC 377
Query: 341 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
D TY+ ++ LCK ++ A +L G + V+DGL G
Sbjct: 378 YPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVG 430
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 127/272 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M++ + C + +L M G P VVT+N LI + LL +L++L+ M +
Sbjct: 281 MILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKH 340
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ S+N L+ D A + M+ P T+NI+L LCK+ D+A
Sbjct: 341 GHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDA 400
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + L G P L++YN +I GL K G+ A +L+E+ G P+ IT T+++
Sbjct: 401 VVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGG 460
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R K ++ +K G + F Y +++ K + A D++ MV +G +
Sbjct: 461 LSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPT 520
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
SY TLI EG E A L +E+ +G
Sbjct: 521 EASYTTLIKGITYEGLAEEASKLSNELYSRGL 552
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 137/291 (47%), Gaps = 9/291 (3%)
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
L + G+ +E +R + M P ++ CK T NA R+ L++ G V +
Sbjct: 79 LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR-KYKLGLEIL 194
+YN+LI CK+G + A L+ L + APNA TY ++ C +R K K +++L
Sbjct: 139 ANSYNVLINAYCKSGEIEEA---LRVLDHTSVAPNAATYDAVL-CSLCDRGKLKQAMQVL 194
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
+ D +I A K + +A +M G + D+V+YN LI +CKE
Sbjct: 195 DRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKE 254
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
G+L+ A + L ++ G + D +H +++ LC G A L M + G ++ +
Sbjct: 255 GRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTF 314
Query: 315 NCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSA 361
N +++ L + G + A+NV E M +S +++ ++ C K + A
Sbjct: 315 NILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRA 365
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 216 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
++ G L+E + ++E M G D+V+ LI +CK G+ + A ++ +E+ G D
Sbjct: 79 LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138
Query: 276 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV-- 333
++ +LI+ CK+G I+ A L ++ N Y+ ++ L GK+ A+ V
Sbjct: 139 ANSYNVLINAYCKSGEIEEA---LRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLD 195
Query: 334 --FESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 365
+S D T + ++ CK + A KL
Sbjct: 196 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLF 229
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 57/132 (43%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID + + +L M G+ PD++T S++ G +R + ++ + G
Sbjct: 422 VIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFG 481
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+ + YNS+M L + + A DM+ P A++ ++ G+ + A
Sbjct: 482 IKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEAS 541
Query: 122 RMFRGLQKHGFV 133
++ L G V
Sbjct: 542 KLSNELYSRGLV 553
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 196/438 (44%), Gaps = 39/438 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ + D Y + M + GI P+VVTY ++I G + ++ + + +M++
Sbjct: 208 IVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK 267
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD +YN L+H +GK E R+ ++M L P T+ +LN LC N A
Sbjct: 268 GVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREA 327
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + + G P + Y ILI G G L +L + ++G +P+ + I
Sbjct: 328 RFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTA 387
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT-------------- 226
+ + I + MK++G + D Y +I A K+GR+ +A
Sbjct: 388 YAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPN 447
Query: 227 ---------------------DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
++ +M+ G++ D+V +NT++ C +G++ A L+D
Sbjct: 448 IFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLID 507
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
ME+ G ++T LI G C G I A L+ M +G + YN ++ + G
Sbjct: 508 LMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAG 567
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+ID A VF M TYS+++H L +R A +L L+ + SG +
Sbjct: 568 RIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYN 627
Query: 382 AVVDGLRHSGCRREAKKI 399
+++GL + C EA K+
Sbjct: 628 IILNGLSKNNCVDEAFKL 645
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 175/364 (48%), Gaps = 7/364 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE---MGIPPDVWSYNSLMH 74
++ RM E G +PDVV+YN+L+ G +L+LL M + PP+V SY +++
Sbjct: 152 LVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVIN 211
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
F G+ D+A +F +M+ + P T+ +++GLCK + D A +F+ + G P
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
+ TYN LI G G+ + +L+E+ G P+ TY +++ N + + +
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLF 331
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
+M RKG + Y +I + G L E D + MV +G+ D +N + Y K+
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
++ A + ++M++QG D + LID LCK G + A L M G N+ +
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVF 451
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
N +V L K + A + M + D +++++ NLC ++ A +L+ +
Sbjct: 452 NSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMER 511
Query: 371 SGVR 374
G R
Sbjct: 512 VGTR 515
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 184/395 (46%), Gaps = 4/395 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI Y + + +LN M E G+SPD +N + + +++ ++ + ++M +
Sbjct: 348 ILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQ 407
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV +Y +L+ L +LG+ D+A F M+ + P FN ++ GLC + A
Sbjct: 408 GLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKA 467
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P++V +N ++ LC G++ A+ ++ + G P I+YTT++
Sbjct: 468 KEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGG 527
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + L M G D + Y T++ + + GR+ +A +M+ +G+
Sbjct: 528 HCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPG 587
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+Y+T+++ + A L M G + + + + I+++GL K + A +
Sbjct: 588 VVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQ 647
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ F + +N ++ L K G+ + A+++F ++ V D FTY + NL +
Sbjct: 648 SLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEG 707
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
L L + KSG A+V L H G
Sbjct: 708 YLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRG 742
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 149/340 (43%), Gaps = 4/340 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C ++ M GI PDVV +N+++ + + L+D M +G
Sbjct: 454 LVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVG 513
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
P V SY +L+ HCL +G+ DEA + M+ L P T+N +L+G C+ D+
Sbjct: 514 TRPGVISYTTLIGGHCL--VGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDD 571
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +FR + ++G P +VTY+ ++ GL R A+ + + SG N Y I+
Sbjct: 572 AYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILN 631
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+N ++ ++ K + + + +I A K GR ++A + + G+
Sbjct: 632 GLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVP 691
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+ +Y + +EG LE L MEK G + L+ L G+I A +L
Sbjct: 692 DVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYL 751
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
+++ F ++ L +D HA ++ E V
Sbjct: 752 CKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYRV 791
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 175/396 (44%), Gaps = 29/396 (7%)
Query: 23 REAGISPDVVTYNSLIAGATRNSLLSC--SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
R + +S + +I R+ L +L L D +L P V ++N L+ + ++
Sbjct: 4 RVSAVSNRCLELERVIGSRARSGSLGLDDALKLFDGLLTHARPASVIAFNHLLTAVSRVS 63
Query: 81 -------KPDEANRVFQDMI--CG-DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+ + +F MI C +TP T++I++ C+ ++ F + K
Sbjct: 64 GRRSSTTESELVVSLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKS 123
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWIL-KELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G+ + N L+KGLC A RL A IL K + + G P+ ++Y T++K ++ +
Sbjct: 124 GWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEE 183
Query: 190 GLEILSAM---KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
LE+L M + + + Y VI F G++ +A + +M+ G+Q ++V+Y T
Sbjct: 184 ALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTT 243
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
+I+ CK ++ A + +M +G + D T+ LI G G K LE M+ G
Sbjct: 244 VIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHG 303
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 362
+ Y +++ L +G+ A +F+SM K + Y ++H L
Sbjct: 304 LKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMH 363
Query: 363 KLLLSCLKSGVR---------ILKSAQKAVVDGLRH 389
LL +++G+ A+KA++D H
Sbjct: 364 DLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMH 399
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 178/381 (46%), Gaps = 23/381 (6%)
Query: 8 QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 67
F + D + NRM P V +N L+ + S L L +M GIPP+++
Sbjct: 38 HFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIY 97
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+ + L++ L + A V ++ P TATF ++ G+C AL +F +
Sbjct: 98 TLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKM 157
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
GF P++VTY LI GLCK G A +L + PN Y TI+ ++R+
Sbjct: 158 IGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQV 217
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
+ S M KG + D F Y ++I A + K + +MV + D+VS+NT+
Sbjct: 218 TEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTV 277
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
++ CKEGK+ A+ ++D+M ++G E + T+T L+DG C + A + M G
Sbjct: 278 VDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGC 337
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAIN-------------------VFESMEVK----DSFT 344
N+ +YN +++ K +ID AI+ VF++M K + +
Sbjct: 338 MPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVIS 397
Query: 345 YSSMVHNLCKAKRLPSASKLL 365
Y+++++ CK +R+ A L
Sbjct: 398 YNTLINGYCKIQRIDKAMYLF 418
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 176/369 (47%), Gaps = 20/369 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+++C +++L ++ + G PD T+ +LI G + +L L D+M+
Sbjct: 101 ILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGE 160
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +Y +L++ L ++G A R+ M+ + P +N +++ LCK+R A
Sbjct: 161 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEA 220
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G P++ TYN LI LC + +L E+ DS P+ +++ T++
Sbjct: 221 FNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDA 280
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K +++ M ++G + Y ++ + + EA + MV G +
Sbjct: 281 LCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPN 340
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++SYNTLIN YCK +++ A +T L+D C N+ A +
Sbjct: 341 VISYNTLINGYCKIQRIDKA----------------IHYTXLMDXXCCYLNMDEAVKVFD 384
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
M G N+ +YN +++ K +ID A+ +F M + D+ TYS+++H LC +
Sbjct: 385 TMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVE 444
Query: 357 RLPSASKLL 365
RL A L
Sbjct: 445 RLQDAIALF 453
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 186/421 (44%), Gaps = 23/421 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID+ C+ + + + M GISPD+ TYNSLI LL+EM++
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV S+N+++ L + GK EA+ V MI + P T+ +++G C D A+
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAV 326
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW-------------------ILKEL 162
++F + G +P +++YN LI G CK R+ A + +
Sbjct: 327 KVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTM 386
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
G PN I+Y T++ + ++ + + M R+ D Y T+I + RL
Sbjct: 387 VCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERL 446
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
++A +MV ++V+Y L++ CK L A LL +E + D + I
Sbjct: 447 QDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIA 506
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 338
IDG+C+AG ++ AR ++ G ++ Y+ +++ L + G +D A +F M+
Sbjct: 507 IDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGC 566
Query: 339 VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
+ Y+++ + A +LL + G S V L G + K+
Sbjct: 567 TLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQ 626
Query: 399 I 399
I
Sbjct: 627 I 627
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 111/240 (46%), Gaps = 4/240 (1%)
Query: 168 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
P+ + + ++ + + + L + M G + + +I +F + R+ A
Sbjct: 58 PPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFS 117
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
+ +++ G Q D ++ TLI C EGK+ A L D+M +GF D T+ LI+GLC
Sbjct: 118 VLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLC 177
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 343
K GN A L M + N+ AYN I+D L KD ++ A N+F M K D F
Sbjct: 178 KVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIF 237
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
TY+S++H LC + LL + S + + VVD L G EA + K+
Sbjct: 238 TYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKM 297
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 6/163 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ +L + + + PD+ N I G R L + DL +
Sbjct: 470 ILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK 529
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT---ATFNIMLNGLCKNRYT 117
G+ PDVW+Y+ +++ L + G DEA+++F++M D CT +N + G +N T
Sbjct: 530 GLQPDVWTYSIMINGLCRRGLLDEASKLFREM---DENGCTLNGCIYNTITRGFLRNNET 586
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
A+++ + + GF + T + +K L G ++ + IL+
Sbjct: 587 SRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILR 629
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 195/401 (48%), Gaps = 4/401 (0%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
C+ +D +L M + G++P+ TYN+L+ R + + ++ DEM G+ PD+
Sbjct: 338 CKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDL 397
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
S++SL+ L + G +A F++M + P + I+++G C+N +AL+M
Sbjct: 398 VSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDE 457
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
+ G ++VTYN + GLCK A + E+ + G P+ T+TT+++ ++
Sbjct: 458 MLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGN 517
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
L + AM R D Y T+I F K G + A + + M+ + D +SY T
Sbjct: 518 MDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGT 577
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
++N +C G L A L D+M ++G + T LI G C++G++ A +L M G
Sbjct: 578 VLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNG 637
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 362
+ +YN ++D K+ ++ A + ME + + TY+ +++ C ++ A
Sbjct: 638 IIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAE 697
Query: 363 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++L ++ G+ + ++++G +EA + ++
Sbjct: 698 QVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEM 738
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 192/390 (49%), Gaps = 4/390 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++A C+ F+ L+ M G+ D+VTYN+LI R L+ + LL+
Sbjct: 262 IMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSR 321
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P + +YN++++ L ++GK D A V +M+ LTP AT+N +L +C+ A
Sbjct: 322 GMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEA 381
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + + G +P+LV+++ LI L + G L A +E+ SG P+ + YT ++
Sbjct: 382 QEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDG 441
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
RN L++ M +G D Y T + K +A +MV G+ D
Sbjct: 442 FCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPD 501
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++ TLI YCK+G ++ A L + M + + DK T+ LIDG CKAG + A+ +
Sbjct: 502 FYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWD 561
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + + +Y +++ G + A+N+ + M K + T ++++ C++
Sbjct: 562 DMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSG 621
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+P A + L + +G+ + ++DG
Sbjct: 622 DMPKAYEYLSKMISNGIIPDSFSYNTLIDG 651
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 180/400 (45%), Gaps = 4/400 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ Y Q G +R G+S + N L+ G R + + ++ E++
Sbjct: 192 LLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRG 251
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI +V++ N +++ L + K + DM + T+N ++N C+ + A
Sbjct: 252 GIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEA 311
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ G P L+TYN ++ GLCK G+ A+ +L E+ G PNA TY T++
Sbjct: 312 FQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVE 371
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R EI M R+G D + ++I + G L +A + +M G+ D
Sbjct: 372 ICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPD 431
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V Y LI+ +C+ G L A + DEM +G D T+ ++GLCK A +
Sbjct: 432 NVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFN 491
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + G + + ++ KDG +D A+N+FE+M D TY++++ CKA
Sbjct: 492 EMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAG 551
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ A +L ++ + + V++G SG EA
Sbjct: 552 EMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEA 591
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 183/395 (46%), Gaps = 4/395 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D + I + GI +V T N ++ ++ + L +M G+ D+ +YN+L
Sbjct: 239 DLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTL 298
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
++ + G +EA ++ + P T+N +L GLCK D A + + + G
Sbjct: 299 INAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGL 358
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P TYN L+ +C+ + A+ I E+ G P+ +++++++ RN L
Sbjct: 359 TPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALM 418
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
M+R G D Y +I F + G L +A ++M+ G +D+V+YNT +N C
Sbjct: 419 HFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLC 478
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K+ A +L +EM ++G D YT T LI G CK GN+ A E M + +
Sbjct: 479 KKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKV 538
Query: 313 AYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
YN ++D K G++ A +++ M + D +Y ++++ C + LP A L
Sbjct: 539 TYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQM 598
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L+ G+R ++ G SG +A + SK+
Sbjct: 599 LEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKM 633
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 161/305 (52%), Gaps = 1/305 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID +C+ + + + M G DVVTYN+ + G + + + + L +EM+E
Sbjct: 437 ILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVER 496
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD +++ +L+ + G D+A +F+ M+ +L P T+N +++G CK A
Sbjct: 497 GMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRA 556
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + + +P+ ++Y ++ G C +G L A + ++ + G PN +T T++K
Sbjct: 557 KELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKG 616
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R+ E LS M G D F Y T+I ++K L++A + +M G+Q +
Sbjct: 617 YCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFN 676
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
I++YN ++N +C EGK++ A +L +M + G D T++ LI+G N+K A R H
Sbjct: 677 IITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHD 736
Query: 300 EYMNK 304
E + +
Sbjct: 737 EMLQR 741
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 162/343 (47%), Gaps = 4/343 (1%)
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + + N L+ L + G D A ++ +++ G + T NIM+N LCK+R +N
Sbjct: 217 GVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENV 276
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++ G ++VTYN LI C+ G + A +L G P +TY I+
Sbjct: 277 MFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYG 336
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ KY ++L M + G T + Y T++ + + EA + ++M GV D
Sbjct: 337 LCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPD 396
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+VS+++LI + + G L A + EME+ G D +TILIDG C+ G + A +
Sbjct: 397 LVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRD 456
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
M G ++ YN ++ L K A +F M V D +T+++++ CK
Sbjct: 457 EMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDG 516
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ A L + +++ ++ K ++DG +G AK++
Sbjct: 517 NMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKEL 559
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 141/274 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ C+ F + N M E G+ PD T+ +LI G ++ + +L+L + M+
Sbjct: 473 FLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN 532
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +YN+L+ + G+ A ++ DMI D+ P ++ +LNG C + AL
Sbjct: 533 LKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEAL 592
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P LVT N LIKG C++G + A L ++ +G P++ +Y T++
Sbjct: 593 NLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGY 652
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + +++ M+++G F+ Y ++ F G+++EA + +M+ G+ D
Sbjct: 653 LKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDG 712
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
+Y++LIN + + ++ A+ DEM ++G D
Sbjct: 713 ATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 4/207 (1%)
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
+ Y +++ + +K + G E ++RKG + ++ V+ G + A +
Sbjct: 187 GLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYG 246
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
++V G++L++ + N ++N CK+ K E L +ME +G D T+ LI+ C+ G
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYS 346
++ A L + G + L YN I+ L K GK D A +V M ++ TY+
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGV 373
+++ +C+ + A ++ + GV
Sbjct: 367 TLLVEICRRDNILEAQEIFDEMSRRGV 393
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 97/202 (48%), Gaps = 12/202 (5%)
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
G Y ++ +V+ +L+E ++ + + GV + I + N L+ + G ++ A+ +
Sbjct: 187 GLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYG 246
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
E+ + G E + YT I+++ LCK + L M G +++ YN +++ ++G
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306
Query: 326 KIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
++ A + S + TY+++++ LCK + A +L+ L+ G+ +
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGL----TPNA 362
Query: 382 AVVDGLRHSGCRR----EAKKI 399
A + L CRR EA++I
Sbjct: 363 ATYNTLLVEICRRDNILEAQEI 384
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++ +C +L +M E GI+PD TY+SLI G + + DEML+
Sbjct: 682 LILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQR 741
Query: 61 GIPPD 65
G+ PD
Sbjct: 742 GLVPD 746
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 193/397 (48%), Gaps = 6/397 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ CQ D + N G+ P V+ YN LI G + L+ +L +++EM E G
Sbjct: 362 LINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENG 421
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
D+W+YN +++ L ++G +AN + D I P TFN +++G CK + +
Sbjct: 422 CSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTI 481
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + HG P+++TYN ++ GL KA + + + + G PN ITY + +
Sbjct: 482 QILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESL 541
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLD 240
+ K L+++ + KG T D + T+I+ F G LK A +M V
Sbjct: 542 CKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHT 601
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHL 299
+YN +IN + ++ L L EM G D YT+ ++IDG C GN G + L
Sbjct: 602 TATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLL 661
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA-KRL 358
E + K GF +L + +++ L ++ A+++ M V + +V+++ +A K++
Sbjct: 662 EMIEK-GFIPSLTTFGRVINCLCVQHRVHEAVDIIHFM-VHNGIV-PEVVNSISEADKKV 718
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
+A K+++ L I A + + DG+R +++
Sbjct: 719 VAAPKIVVEDLLKRSCITYYAYELLYDGIRDKKTQKQ 755
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 207/448 (46%), Gaps = 40/448 (8%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
I ++C+ + +LN M G + V Y +++AG + + +L ++ML +GI
Sbjct: 153 IKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGI 212
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
PDV ++N L+H L + G+ E+ R+ ++ + TFNI + GLC+ A+
Sbjct: 213 FPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMS 272
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
M + + G P++VTYN LI GLCK + A L +L + G P+ TY T++
Sbjct: 273 MLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYC 332
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ + +IL KG+ D F YC++I + + A + G++ ++
Sbjct: 333 KMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVI 392
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA------- 295
YN LI C+EG + A +++EM + G D +T+ ++I+GLCK G + A
Sbjct: 393 LYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDA 452
Query: 296 -------------------------RLHLEYMNKI---GFDSNLEAYNCIVDRLGKDGKI 327
++ +NK+ G ++ YN +++ L K K
Sbjct: 453 IAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKN 512
Query: 328 DHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
+ + FE+M V + TY+ + +LCKA ++ A L+ L G+ + +
Sbjct: 513 EDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATI 572
Query: 384 VDGLRHSGCRREAKKIQSKI-RMAKISH 410
+ G ++G + A ++ ++ K+SH
Sbjct: 573 ISGFANNGDLKGAYQLFRRMGEQYKVSH 600
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 193/397 (48%), Gaps = 7/397 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ I C+ ++L+ + G++PDVVTYN+LI G +NS + + L +++
Sbjct: 256 IFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNG 315
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD ++YN+L+ ++G A ++ Q IC P T+ ++NGLC+N D A
Sbjct: 316 GLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRA 375
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F G P ++ YN+LIKGLC+ G + A ++ E+ ++G + + TY ++
Sbjct: 376 LALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVING 435
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ +++ KGY D F + T+I + K +++ + +M + GV D
Sbjct: 436 LCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPD 495
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
+++YN+++N K K E + M ++G +K T+ IL + LCKAG + A L
Sbjct: 496 VITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVD 555
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-----DSFTYSSMVHNLCK 354
E +NK G + ++ I+ +G + A +F M + + TY+ M++ +
Sbjct: 556 EILNK-GITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAE 614
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
L KL L G + ++DG +G
Sbjct: 615 KLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITG 651
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 180/368 (48%), Gaps = 4/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ +LN++ + G+ ++ T+N I G R +LS ++ +LD ++ G
Sbjct: 222 LLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREG 281
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +YN+L+ L + EA + ++ G L P T+N +++G CK NA
Sbjct: 282 LTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAE 341
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ +G GFVP+ TY LI GLC+ + A + G P I Y ++K
Sbjct: 342 KILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGL 401
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ L++++ M G + D + Y VI K+G + +A + M + G D+
Sbjct: 402 CQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDV 461
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++NTLI+ YCK+ K+E +L++M G D T+ +++GL KA + E
Sbjct: 462 FTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFET 521
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M + G N YN + + L K GK++ A+++ + + K D+ ++++++
Sbjct: 522 MVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGD 581
Query: 358 LPSASKLL 365
L A +L
Sbjct: 582 LKGAYQLF 589
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 181/383 (47%), Gaps = 4/383 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + RM+ GI PDV T+ I R +L LL+ M+ G + +Y +
Sbjct: 127 FKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCT 186
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
++ ++ EA +F DM+ + P +TFN +L+ LCK + R+ + K G
Sbjct: 187 VVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKG 246
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
L T+NI I+GLC+ G L A +L + G P+ +TY T++ +N
Sbjct: 247 MCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAE 306
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+ L + G DGF Y T+I + K+G L+ A ++ + G D +Y +LIN
Sbjct: 307 KYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGL 366
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
C+ +++ A L + +G + + +LI GLC+ G I A + M++ G S++
Sbjct: 367 CQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDI 426
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
YN +++ L K G + A N+ V D FT+++++ CK ++ + ++L
Sbjct: 427 WTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNK 486
Query: 368 CLKSGVRILKSAQKAVVDGLRHS 390
GV +V++GL +
Sbjct: 487 MWSHGVTPDVITYNSVLNGLSKA 509
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 180/393 (45%), Gaps = 19/393 (4%)
Query: 23 REAGISPDVVTYNSLIAG--------ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
RE G ++TY +I A N L +D+ + +LE G+ Y M
Sbjct: 32 REDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLLE-GV------YIGAMK 84
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
+ GK EA VF+ M + P ++N ++N L ++ Y A ++F ++ G VP
Sbjct: 85 SYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVP 144
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
++ T+ I IK C+ R +A +L + G NA+ Y T++ + E+
Sbjct: 145 DVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELF 204
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
+ M R G D + ++ K G ++E+ + +++ G+ ++ ++N I C++
Sbjct: 205 NDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRK 264
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
G L A +LD + ++G D T+ LI GLCK N+ A +L + G + + Y
Sbjct: 265 GMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTY 324
Query: 315 NCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
N ++D K G + +A + + V D FTY S+++ LC+ + A L + L
Sbjct: 325 NTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALG 384
Query: 371 SGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
G++ ++ GL G +A ++ +++
Sbjct: 385 KGLKPTVILYNMLIKGLCQEGLILQALQMMNEM 417
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 162/356 (45%), Gaps = 4/356 (1%)
Query: 50 SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 109
++D+ + M P V SYN++M+ L + G +A++VF M + P TF I +
Sbjct: 95 AVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIK 154
Query: 110 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 169
C+ + +ALR+ + G V Y ++ G + A + ++ G P
Sbjct: 155 SFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFP 214
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
+ T+ ++ + + + +L+ + +KG + F + I + G L A +
Sbjct: 215 DVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSML 274
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
+ ++ +G+ D+V+YNTLI CK + A L ++ G E D +T+ LIDG CK
Sbjct: 275 DSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKM 334
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 345
G ++ A L+ GF + Y +++ L ++ +ID A+ +F + K Y
Sbjct: 335 GMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILY 394
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
+ ++ LC+ + A +++ ++G V++GL GC +A + +
Sbjct: 395 NMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMN 450
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 43/99 (43%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+A+ + + G + M G +PD TY +I G L EM+E
Sbjct: 607 IMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEK 666
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTP 99
G P + ++ +++CL + EA + M+ + P
Sbjct: 667 GFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVP 705
>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
Length = 833
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 199/438 (45%), Gaps = 51/438 (11%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE---MGIPPDVWSY 69
+A +L RM E G +P+VV+YN+L+ G + +L+LL M + + PPDV SY
Sbjct: 248 EATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSY 307
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N++++ F+ G+ D+A +F MI + P T+N +++GLCK + D A +F+ +
Sbjct: 308 NTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLD 367
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G P TYN LI G G+ + +L+E+ P+ Y ++ +N +
Sbjct: 368 KGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTE 427
Query: 190 GLEILSAMKRKGYTFDGF---------------------GYCTVIAAFVKIGRLKEATDY 228
I ++ RKG D Y +I A K+GR+ +A
Sbjct: 428 ARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILK 487
Query: 229 MEQMVTD-----------------------GVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
QM+ + G++LD+V +NTL+ C+EG++ A L++
Sbjct: 488 FNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIE 547
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M + G D ++ L+DG C G A L+ M IG N YN ++ K
Sbjct: 548 LMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKAR 607
Query: 326 KIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+ID A ++ M D TY++++H L + R A +L L+ + S +
Sbjct: 608 RIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYN 667
Query: 382 AVVDGLRHSGCRREAKKI 399
+++GL + C EA K+
Sbjct: 668 IILNGLCKNNCVDEAFKM 685
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 200/427 (46%), Gaps = 37/427 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ + + D Y + +M + GI PDVVTYN++I G + ++ + + +ML+ G
Sbjct: 310 VINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKG 369
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN------- 114
+ P +YN L+H GK E R+ ++M DL P + ++L+ LCKN
Sbjct: 370 VKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEAR 429
Query: 115 --------------RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
D A+ +F +++ G P +V Y LI LCK GR+ A ILK
Sbjct: 430 NIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDA--ILK 487
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
N + C K++ E++ M +G D + T++ + G
Sbjct: 488 F--------NQMINEVYGLCTVE--KWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREG 537
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
R+ EA +E M+ GV+ D++SYNTL++ +C G+ + A LLD M G + +++T+
Sbjct: 538 RVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYN 597
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFES 336
L+ G CKA I A L M G ++ YN I+ L + G+ A +N+ S
Sbjct: 598 TLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINS 657
Query: 337 MEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
D +TY+ +++ LCK + A K+ S G+++ ++ L G + +A
Sbjct: 658 RTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDA 717
Query: 397 KKIQSKI 403
+ + I
Sbjct: 718 MDLFATI 724
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 202/478 (42%), Gaps = 96/478 (20%)
Query: 15 GYTILNRM-REAG--ISPDVVTYNSLIAGATR--------------------------NS 45
G ++ +RM RE ++PD TY+ LI R N
Sbjct: 176 GISLFDRMVRECSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQ 235
Query: 46 LLS--CSLDLLDE--------MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF------ 89
LL C LDE M E G P+V SYN+L+ + +EA +
Sbjct: 236 LLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADD 295
Query: 90 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
Q + C P ++N ++NG + D A +F + G P++VTYN +I GLCKA
Sbjct: 296 QGLSC---PPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKA 352
Query: 150 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 209
+ A+ + +++ D G P+ TY ++ K+K + +L M D F Y
Sbjct: 353 QVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIY 412
Query: 210 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLD---------------------IVSYNTLI 248
++ K GR EA + + ++ G++ D +V+Y LI
Sbjct: 413 ALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALI 472
Query: 249 NLYCKEGKLEAAYL-----------------------LLDEMEKQGFECDKYTHTILIDG 285
+ CK G+++ A L L+ EM QG D L+
Sbjct: 473 DALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCD 532
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA---INVFESMEVK-D 341
LC+ G + A+ +E M ++G ++ +YN +VD G+ D A ++V S+ +K +
Sbjct: 533 LCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPN 592
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
FTY++++H CKA+R+ A LL L +G ++ GL +G EAK++
Sbjct: 593 EFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKEL 650
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 161/342 (47%), Gaps = 23/342 (6%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLI-----AGATRNSLLS-----------CSLD--- 52
D I ++MR+ G+SP+VV Y +LI G +++L C+++
Sbjct: 446 IDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWE 505
Query: 53 ----LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 108
L+ EML+ GI DV +N+LM L + G+ EA R+ + M+ + P ++N ++
Sbjct: 506 KAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLV 565
Query: 109 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
+G C TD A ++ + G P TYN L+ G CKA R+ A +L+E+ +G
Sbjct: 566 DGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPT 625
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
P+ +TY TI+ F+ ++ E+ M +D + Y ++ K + EA
Sbjct: 626 PDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKM 685
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+ + + G+QL I+++N +I K GK E A L + G D T+ ++ + L K
Sbjct: 686 FQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIK 745
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
G+++ + M + G N N +V R G I A
Sbjct: 746 EGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRA 787
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 150/309 (48%), Gaps = 6/309 (1%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
C ++ ++ M + GI DVV +N+L+ R + + L++ ML +G+ PDV
Sbjct: 499 CTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDV 558
Query: 67 WSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 124
SYN+L+ HCL G+ DEA ++ M+ L P T+N +L+G CK R D+A +
Sbjct: 559 ISYNTLVDGHCL--TGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLL 616
Query: 125 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
R + +G P++VTYN ++ GL + GR A+ + + +S + TY I+ +N
Sbjct: 617 REMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKN 676
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
++ ++ KG + +I A +K G+ ++A D + G+ D+ +Y
Sbjct: 677 NCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETY 736
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
+ KEG LE +L ME+ G + L+ G+I A +L +++
Sbjct: 737 CLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDE 796
Query: 305 IGFDSNLEA 313
F +LEA
Sbjct: 797 KNF--SLEA 803
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 161/377 (42%), Gaps = 37/377 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ I + + GI PD +++ ++ + D+M +
Sbjct: 414 LLLDYLCKNGRCTEARNIFDSVIRKGIKPD--------------AMIDEAVCIFDKMRQQ 459
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA------------------ 102
G+ P+V +Y +L+ L +LG+ D+A F MI CT
Sbjct: 460 GLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGI 519
Query: 103 -----TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 157
FN ++ LC+ A R+ + + G P++++YN L+ G C GR A
Sbjct: 520 RLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAK 579
Query: 158 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 217
+L + G PN TY T++ + R+ +L M G T D Y T++
Sbjct: 580 LLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLF 639
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 277
+ GR EA + M+ Q D+ +YN ++N CK ++ A+ + + +G +
Sbjct: 640 QTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHII 699
Query: 278 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
T I+I L K G + A ++ G ++E Y I + L K+G ++ +F +M
Sbjct: 700 TFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAM 759
Query: 338 EVKDSFTYSSMVHNLCK 354
E + S M++ L +
Sbjct: 760 EENGTAPNSRMLNALVR 776
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 165/395 (41%), Gaps = 77/395 (19%)
Query: 50 SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG------KPDEANRVFQDMI--CGD-LTPC 100
+L L D +L P V ++N L+ + + + +F M+ C D + P
Sbjct: 135 ALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDKVAPD 194
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI-L 159
T++I++ C+ ++ +F + K G+ + +N L+KGLC A RL A I L
Sbjct: 195 RCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILL 254
Query: 160 KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK-RKGYT--FDGFGYCTVIAAF 216
+ + G PN ++Y T++K + + LE+L M +G + D Y TVI F
Sbjct: 255 WRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGF 314
Query: 217 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE---------------------- 254
+ G++ +A + QM+ G+ D+V+YNT+I+ CK
Sbjct: 315 FREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSN 374
Query: 255 -------------GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR----- 296
GK + LL+EM E D + + +L+D LCK G AR
Sbjct: 375 GTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDS 434
Query: 297 ----------------LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
+ M + G N+ Y ++D L K G++D AI F M
Sbjct: 435 VIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQM--- 491
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
+ V+ LC ++ A +L+ L G+R+
Sbjct: 492 -----INEVYGLCTVEKWEKAEELVFEMLDQGIRL 521
>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 174/346 (50%), Gaps = 4/346 (1%)
Query: 23 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 82
++ I P+V+++N +I + L+ +++L EM PD ++Y +LM L ++ +
Sbjct: 173 KDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRI 232
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
DEA + +M P ATFN+++NGLCK ++ + G VP VTYN L
Sbjct: 233 DEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTL 292
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
I GLC G+L A +L + S PN +TY TI+ + + G +L M+ +GY
Sbjct: 293 IHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGY 352
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
+ + Y +++ K G+ +EA ++ + G +L+ V Y+ L++ C++ K + A
Sbjct: 353 IVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMK 412
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
+L EM +G + +T + L+ G + GN A + M KI N Y+ ++ L
Sbjct: 413 ILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLC 472
Query: 323 KDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKL 364
KDGK+ A+ V+ M D YSSM+ LC A + A KL
Sbjct: 473 KDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKL 518
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 163/338 (48%), Gaps = 2/338 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+ D ++L+ M+ G P T+N LI G + + L+D M G
Sbjct: 222 LMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKG 281
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +YN+L+H L GK D+A + M+ P T+ ++NGL K +
Sbjct: 282 CVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGA 341
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ +++ G++ Y++L+ GL K G+ A + KE D G N + Y+ ++
Sbjct: 342 RVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGL 401
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+RK ++ILS M KG + F + +++ F ++G +A + + M +
Sbjct: 402 CRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENE 461
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V Y+ LI+ CK+GK+ A ++ +M G D ++ +I GLC AG+++ A
Sbjct: 462 VCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNE 521
Query: 302 MNKIGFDSNLE--AYNCIVDRLGKDGKIDHAINVFESM 337
M + DS + YN + + L K I A+++ SM
Sbjct: 522 MLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSM 559
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 140/275 (50%), Gaps = 9/275 (3%)
Query: 99 PCTATFNIMLNGLCKNRYTDNALRMFR---GLQKHGFVPELVTYNILIKGLCKAGRLRTA 155
P +FN +LN + + + D AL + G + +P ++++N++IK +CK G + A
Sbjct: 141 PTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNA 200
Query: 156 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 215
+ +E+ P+A TY T+M + + + +L M+ +G + +I
Sbjct: 201 IELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLING 260
Query: 216 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
K G T ++ M G + V+YNTLI+ C +GKL+ A LLD M +
Sbjct: 261 LCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPN 320
Query: 276 KYTHTILIDGLCKAGN-IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
+ T+ +I+GL K G + GAR+ L M + G+ N Y+ +V L K+GK + A+ +F
Sbjct: 321 EVTYGTIINGLVKQGRALDGARV-LVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLF 379
Query: 335 -ESMEVK---DSFTYSSMVHNLCKAKRLPSASKLL 365
ESM+ ++ YS++V LC+ ++ A K+L
Sbjct: 380 KESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKIL 414
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 164/365 (44%), Gaps = 24/365 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C D ++L+RM + P+ VTY ++I G + +L M E G
Sbjct: 292 LIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERG 351
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ + Y+ L+ LF+ GK +EA R+F++ + T ++ +++GLC++R D A+
Sbjct: 352 YIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAM 411
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + G P T++ L+KG + G A + K++ A N + Y+ ++
Sbjct: 412 KILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGL 471
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV--TDGVQL 239
++ K + + + M G D Y ++I G ++EA +M+ Q
Sbjct: 472 CKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQP 531
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK--GARL 297
D+++YN L N CK+ + A LL+ M +G + D T I + L + + GA+
Sbjct: 532 DVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQDGAKF 591
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 353
E +V RL K + A + E M K + T++ +VH LC
Sbjct: 592 LDE----------------LVVRLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELC 635
Query: 354 KAKRL 358
+ K++
Sbjct: 636 QPKKI 640
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 184/406 (45%), Gaps = 39/406 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+AYC A L + AG++PD Y S + G R +L+ + + M G
Sbjct: 78 LINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRG 137
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
++Y +L+H L G EA VF M P T + M++GLC+ T+ A
Sbjct: 138 CLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAE 197
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ +GF P +V YN LI G C AG + A + + + + +PN TYT ++
Sbjct: 198 VLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIH-- 255
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
G C K G+++ A +MV G++ ++
Sbjct: 256 --------------------------GLC-------KSGKVERAMVLFSRMVEAGLEPNV 282
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y LI C EG L+ A+ LL ME G + +T ++LID LCK ++ A+L L
Sbjct: 283 VTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGS 342
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ K G N Y ++D L K GKID A + + M V D+ +YSS++ LC+ K+
Sbjct: 343 LVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKK 402
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L A+ +L ++ G++ ++D L KKI K+
Sbjct: 403 LSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 197/414 (47%), Gaps = 16/414 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + + +RM EAG+ P+VVTY +LI G L C+ LL M G
Sbjct: 253 LIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNG 312
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ W+++ L+ L + K +EA ++ + + +++GLCK D A
Sbjct: 313 LVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAAD 372
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + GFVP+ +Y+ LI GLC+ +L A +L+++ + G + +TYT I+
Sbjct: 373 ELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDEL 432
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + +I M G D Y + ++ + GR+++A + QMV GV ++
Sbjct: 433 VREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNL 492
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID------------GLCKA 289
V+YNTLI Y G + A+ + M +G++ ++ ++T+L+ + K
Sbjct: 493 VTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKI 552
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 345
++K ++ LE + + + Y+C + L + +++ A + F M+ Y
Sbjct: 553 ADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVY 612
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+S++ C+ K L A LL S KSG + + ++ L G R AK++
Sbjct: 613 TSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEV 666
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 150/325 (46%), Gaps = 6/325 (1%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G P++V YN+LI G + +L + + M P+V +Y L+H L + GK + A
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+F M+ L P T+ ++ G C + A R+ ++ +G VP T+++LI
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCK ++ A+ L L G N + YT+++ + K E++ M +G+ D
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y ++I + +L +AT +E M+ G+Q V+Y +I+ +E E + D
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFD 446
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+M G D T+T+ + C+ G ++ A + M G NL YN ++ G
Sbjct: 447 KMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLG 506
Query: 326 KIDHAINVFESMEVK------DSFT 344
+ A + FE M K DS+T
Sbjct: 507 LVSQAFSTFEVMVGKGWKPNEDSYT 531
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 167/381 (43%), Gaps = 16/381 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDA C+ + L + + G+ + V Y SLI G + + + +L+ +M+
Sbjct: 322 VLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISE 381
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD SY+SL+ L + K +A + +DM+ + T+ I+++ L + ++
Sbjct: 382 GFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGP 441
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F + G P++VTY + ++ C+ GR+ A ++ ++ D G PN +TY T+++
Sbjct: 442 KKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRG 501
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV------------KIGRLKEATDY 228
M KG+ + Y ++ V KI +K+
Sbjct: 502 YANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVL 561
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+E + + L Y+ I C+ +LE A M+ + +T +ID C+
Sbjct: 562 LEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCR 621
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 344
+ A L+ M K G+ +LE+Y I+ L + G A VF + +K D
Sbjct: 622 LKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIV 681
Query: 345 YSSMVHNLCKAKRLPSASKLL 365
+ +++ L + + S LL
Sbjct: 682 WKILIYGLLQKGSVAEFSSLL 702
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 142/305 (46%), Gaps = 4/305 (1%)
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
T+ ++N C A + L G P+ Y + G C+AG L A + +
Sbjct: 74 TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
G A TYT ++ + + + M+ D Y T++ + GR
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
+EA +E+ +++G + +IV YN LI+ YC G++E A + + M+ + T+T L
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 338
I GLCK+G ++ A + M + G + N+ Y ++ +G + A + ME
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGL 313
Query: 339 VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
V + +T+S ++ LCK +++ A L S +K GV++ + +++DGL +G A +
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373
Query: 399 IQSKI 403
+ K+
Sbjct: 374 LMQKM 378
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 136/356 (38%), Gaps = 47/356 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ DA ++ +M G PD +Y+SLI G R LS + +L++M+E G
Sbjct: 358 LIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKG 417
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I +Y ++ L + + ++F MI + P T+ + + C+ ++A
Sbjct: 418 IQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAE 477
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + G P LVTYN LI+G G + A + + G PN +YT +++
Sbjct: 478 SMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLV 537
Query: 182 FRNRKYKLGLEI------------LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
+ ++I L + + Y I ++ RL+EA +
Sbjct: 538 VKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFF 597
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF----------------- 272
M + Y ++I+ C+ L A LLD M K G+
Sbjct: 598 MGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEG 657
Query: 273 ------------------ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
D+ ILI GL + G++ L M + G+ +
Sbjct: 658 GNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPS 713
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 132/285 (46%), Gaps = 12/285 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID + V + I ++M GI+PD+VTY + + + ++ +M++
Sbjct: 427 IIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDR 486
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P++ +YN+L+ LG +A F+ M+ P ++ ++L + K +DN+
Sbjct: 487 GVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNS 546
Query: 121 LRMFR--GLQKHGFVPELVT----------YNILIKGLCKAGRLRTARWILKELGDSGHA 168
+ +++ ++ + E +T Y+ I+ LC+ RL A+ + ++
Sbjct: 547 VDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLT 606
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
P+ YT+I+ CC R + L +L +M + GY Y +I++ + G + A +
Sbjct: 607 PSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEV 666
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
++ D + + LI ++G + LL M++ G++
Sbjct: 667 FGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQ 711
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 4/175 (2%)
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
ME + + ++ +Y TLIN YC G + AA L + G D Y +T + G C+
Sbjct: 60 MESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCR 119
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 344
AG + A M G Y ++ L G + A+ VF M D+
Sbjct: 120 AGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHV 179
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
Y++MVH LC+A R A LL + +G A++DG ++G A K+
Sbjct: 180 YATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKV 234
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M+ A ++P Y S+I R +L+ +L LLD M + G P + SY ++ L + G
Sbjct: 600 MQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGN 659
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
A VF D++ + + I++ GL + + +++HG+ P T N
Sbjct: 660 FRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPS-NTINA 718
Query: 142 LIKG 145
+I G
Sbjct: 719 MITG 722
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 184/406 (45%), Gaps = 39/406 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+AYC A L + AG++PD Y S + G R +L+ + + M G
Sbjct: 78 LINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRG 137
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
++Y +L+H L G EA VF M P T + M++GLC+ T+ A
Sbjct: 138 CLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAE 197
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ +GF P +V YN LI G C AG + A + + + + +PN TYT ++
Sbjct: 198 VLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIH-- 255
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
G C K G+++ A +MV G++ ++
Sbjct: 256 --------------------------GLC-------KSGKVERAMVLFSRMVEAGLEPNV 282
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y LI C EG L+ A+ LL ME G + +T ++LID LCK ++ A+L L
Sbjct: 283 VTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGS 342
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ K G N Y ++D L K GKID A + + M V D+ +YSS++ LC+ K+
Sbjct: 343 LVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKK 402
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L A+ +L ++ G++ ++D L KKI K+
Sbjct: 403 LSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 159/340 (46%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC + + M SP+V TY LI G ++ + ++ L M+E G
Sbjct: 218 LIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAG 277
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V +Y +L+ G A R+ M L P TF+++++ LCK + A
Sbjct: 278 LEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQ 337
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
L K G V Y LI GLCK G++ A +++++ G P+A +Y++++
Sbjct: 338 LFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGL 397
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R +K +L M KG Y +I V+ + ++M+ G+ DI
Sbjct: 398 CRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDI 457
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y + YC+EG++E A ++ +M +G + T+ LI G G + A E
Sbjct: 458 VTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEV 517
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 341
M G+ N ++Y ++ + K D+++++++ ++KD
Sbjct: 518 MVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKD 557
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 150/325 (46%), Gaps = 6/325 (1%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G P++V YN+LI G + +L + + M P+V +Y L+H L + GK + A
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+F M+ L P T+ ++ G C + A R+ ++ +G VP T+++LI
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCK ++ A+ L L G N + YT+++ + K E++ M +G+ D
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y ++I + +L +AT +E M+ G+Q V+Y +I+ +E E + D
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFD 446
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+M G D T+T+ + C+ G ++ A + M G NL YN ++ G
Sbjct: 447 KMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLG 506
Query: 326 KIDHAINVFESMEVK------DSFT 344
+ A + FE M K DS+T
Sbjct: 507 LVSQAFSTFEVMVGKGWKPNEDSYT 531
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 142/305 (46%), Gaps = 4/305 (1%)
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
T+ ++N C A + L G P+ Y + G C+AG L A + +
Sbjct: 74 TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
G A TYT ++ + + + M+ D Y T++ + GR
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
+EA +E+ +++G + +IV YN LI+ YC G++E A + + M+ + T+T L
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 338
I GLCK+G ++ A + M + G + N+ Y ++ +G + A + ME
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGL 313
Query: 339 VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
V + +T+S ++ LCK +++ A L S +K GV++ + +++DGL +G A +
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373
Query: 399 IQSKI 403
+ K+
Sbjct: 374 LMQKM 378
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 137/313 (43%), Gaps = 38/313 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDA C+ + L + + G+ + V Y SLI G + + + +L+ +M+
Sbjct: 322 VLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISE 381
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD SY+SL+ L + K +A + +DM+ + T+ I+++ L + ++
Sbjct: 382 GFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGP 441
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F + G P++VTY + ++ C+ GR+ A ++ ++ D G PN +TY T+++
Sbjct: 442 KKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIR- 500
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ +G + +A E MV G + +
Sbjct: 501 ----------------------------------GYANLGLVSQAFSTFEVMVGKGWKPN 526
Query: 241 IVSYNTLINLYCKEGKLEAA---YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
SY L+ L K+ + + + + D + Q D+ ILI GL + G++
Sbjct: 527 EDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKGSVAEFSS 586
Query: 298 HLEYMNKIGFDSN 310
L M + G+ +
Sbjct: 587 LLSVMKEHGYQPS 599
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 4/175 (2%)
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
ME + + ++ +Y TLIN YC G + AA L + G D Y +T + G C+
Sbjct: 60 MESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCR 119
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 344
AG + A M G Y ++ L G + A+ VF M D+
Sbjct: 120 AGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHV 179
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
Y++MVH LC+A R A LL + +G A++DG ++G A K+
Sbjct: 180 YATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKV 234
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 192/390 (49%), Gaps = 4/390 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++A C+ F+ L+ M G+ D+VTYN+LI R L+ + LL+
Sbjct: 262 IMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSR 321
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P + +YN++++ L ++GK D A V +M+ LTP AT+N +L +C+ A
Sbjct: 322 GMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEA 381
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + + G +P+LV+++ LI L + G L A +E+ SG P+ + YT ++
Sbjct: 382 QEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDG 441
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
RN L++ M +G D Y T + K +A +MV G+ D
Sbjct: 442 FCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPD 501
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++ TLI YCK+G ++ A L + M + + DK T+ LIDG CKAG + A+ +
Sbjct: 502 FYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWD 561
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + + +Y +++ G + A+N+ + M K + T ++++ C++
Sbjct: 562 DMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSG 621
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+P A + L + +G+ + ++DG
Sbjct: 622 DMPKAYEYLSKMISNGIIPDSFSYNTLIDG 651
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 195/401 (48%), Gaps = 4/401 (0%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
C+ +D +L M + G++P+ TYN+L+ R + + ++ DEM G+ PD+
Sbjct: 338 CKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDL 397
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
S++SL+ L + G +A F++M + P + I+++G C+N +AL+M
Sbjct: 398 VSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDE 457
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
+ G ++VTYN + GLCK A + E+ + G P+ T+TT+++ ++
Sbjct: 458 MLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGN 517
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
L + AM R D Y T+I F K G + A + + M+ + D +SY T
Sbjct: 518 MDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGT 577
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
++N +C G L A L D+M ++G + T LI G C++G++ A +L M G
Sbjct: 578 VLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNG 637
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 362
+ +YN ++D K+ ++ A + ME + + TY+ +++ C ++ A
Sbjct: 638 IIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAE 697
Query: 363 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++L ++ G+ + ++++G +EA + ++
Sbjct: 698 QVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEM 738
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 180/400 (45%), Gaps = 4/400 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ Y Q G +R G+S + N L+ G R + + ++ E++
Sbjct: 192 LLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRG 251
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI +V++ N +++ L + K + DM + T+N ++N C+ + A
Sbjct: 252 GIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEA 311
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ G P L+TYN ++ GLCK G+ A+ +L E+ G PNA TY T++
Sbjct: 312 FQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVE 371
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R EI M R+G D + ++I + G L +A + +M G+ D
Sbjct: 372 ICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPD 431
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V Y LI+ +C+ G L A + DEM +G D T+ ++GLCK A +
Sbjct: 432 NVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFN 491
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + G + + ++ KDG +D A+N+FE+M D TY++++ CKA
Sbjct: 492 EMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAG 551
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ A +L ++ + + V++G SG EA
Sbjct: 552 EMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEA 591
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 183/395 (46%), Gaps = 4/395 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D + I + GI +V T N ++ ++ + L +M G+ D+ +YN+L
Sbjct: 239 DLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTL 298
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
++ + G +EA ++ + P T+N +L GLCK D A + + + G
Sbjct: 299 INAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGL 358
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P TYN L+ +C+ + A+ I E+ G P+ +++++++ RN L
Sbjct: 359 TPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALM 418
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
M+R G D Y +I F + G L +A ++M+ G +D+V+YNT +N C
Sbjct: 419 HFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLC 478
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K+ A +L +EM ++G D YT T LI G CK GN+ A E M + +
Sbjct: 479 KKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKV 538
Query: 313 AYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
YN ++D K G++ A +++ M + D +Y ++++ C + LP A L
Sbjct: 539 TYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQM 598
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L+ G+R ++ G SG +A + SK+
Sbjct: 599 LEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKM 633
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 161/305 (52%), Gaps = 1/305 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID +C+ + + + M G DVVTYN+ + G + + + + L +EM+E
Sbjct: 437 ILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVER 496
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD +++ +L+ + G D+A +F+ M+ +L P T+N +++G CK A
Sbjct: 497 GMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRA 556
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + + +P+ ++Y ++ G C +G L A + ++ + G PN +T T++K
Sbjct: 557 KELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKG 616
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R+ E LS M G D F Y T+I ++K L++A + +M G+Q +
Sbjct: 617 YCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFN 676
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
I++YN ++N +C EGK++ A +L +M + G D T++ LI+G N+K A R H
Sbjct: 677 IITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHD 736
Query: 300 EYMNK 304
E + +
Sbjct: 737 EMLQR 741
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 162/343 (47%), Gaps = 4/343 (1%)
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + + N L+ L + G D A ++ +++ G + T NIM+N LCK+R +N
Sbjct: 217 GVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENV 276
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++ G ++VTYN LI C+ G + A +L G P +TY I+
Sbjct: 277 MFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYG 336
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ KY ++L M + G T + Y T++ + + EA + ++M GV D
Sbjct: 337 LCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPD 396
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+VS+++LI + + G L A + EME+ G D +TILIDG C+ G + A +
Sbjct: 397 LVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRD 456
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
M G ++ YN ++ L K A +F M V D +T+++++ CK
Sbjct: 457 EMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDG 516
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ A L + +++ ++ K ++DG +G AK++
Sbjct: 517 NMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKEL 559
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 141/274 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ C+ F + N M E G+ PD T+ +LI G ++ + +L+L + M+
Sbjct: 473 FLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN 532
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +YN+L+ + G+ A ++ DMI D+ P ++ +LNG C + AL
Sbjct: 533 LKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEAL 592
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P LVT N LIKG C++G + A L ++ +G P++ +Y T++
Sbjct: 593 NLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGY 652
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + +++ M+++G F+ Y ++ F G+++EA + +M+ G+ D
Sbjct: 653 LKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDG 712
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
+Y++LIN + + ++ A+ DEM ++G D
Sbjct: 713 ATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 4/207 (1%)
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
+ Y +++ + +K + G E ++RKG + ++ V+ G + A +
Sbjct: 187 GLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYG 246
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
++V G++L++ + N ++N CK+ K E L +ME +G D T+ LI+ C+ G
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYS 346
++ A L + G + L YN I+ L K GK D A +V M ++ TY+
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGV 373
+++ +C+ + A ++ + GV
Sbjct: 367 TLLVEICRRDNILEAQEIFDEMSRRGV 393
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 97/202 (48%), Gaps = 12/202 (5%)
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
G Y ++ +V+ +L+E ++ + + GV + I + N L+ + G ++ A+ +
Sbjct: 187 GLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYG 246
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
E+ + G E + YT I+++ LCK + L M G +++ YN +++ ++G
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306
Query: 326 KIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
++ A + S + TY+++++ LCK + A +L+ L+ G+ +
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGL----TPNA 362
Query: 382 AVVDGLRHSGCRR----EAKKI 399
A + L CRR EA++I
Sbjct: 363 ATYNTLLVEICRRDNILEAQEI 384
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++ +C +L +M E GI+PD TY+SLI G + + DEML+
Sbjct: 682 LILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQR 741
Query: 61 GIPPD 65
G+ PD
Sbjct: 742 GLVPD 746
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 167/357 (46%), Gaps = 4/357 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D Y I RM + G PD+VTY LI L + +L +M G PD Y +L
Sbjct: 279 DEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITL 338
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ G D + M P TF I+++ LCK R D A F ++K G
Sbjct: 339 LDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGI 398
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+P L TYN LI GL +AGR+ A +L + G P A TY + ++ + +E
Sbjct: 399 LPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVE 458
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
MK KG + + + ++GRL+EA + +G+ D V+YN ++ Y
Sbjct: 459 TFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYS 518
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K G+++ A LL EM + G E D LID L KAG + A + M + +
Sbjct: 519 KVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVV 578
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
YN ++ LGK+G++ AI +FESM K ++ ++++++ CK + A K+
Sbjct: 579 TYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMF 635
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 191/431 (44%), Gaps = 39/431 (9%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ M++ I D+ TY ++ + L +L++M + G + +SYN L+H L
Sbjct: 144 VFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLI 203
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
Q G EA V++ M+ L P T++ ++ L K R ++ + + + ++ G P +
Sbjct: 204 QSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVY 263
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T+ I I+ L +AG++ A I + + D G P+ +TYT ++ + + E+ M
Sbjct: 264 TFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKM 323
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K G+ D Y T++ F G L ++ QM DG D+V++ L+++ CK
Sbjct: 324 KANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDF 383
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A+ D M KQG + +T+ LI GL +AG I+ A L M +G YN
Sbjct: 384 DEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIF 443
Query: 318 VDRLGKDGKIDHAINVFESMEVK------------------------------------- 340
+D GK G+ A+ FE M+ K
Sbjct: 444 IDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGL 503
Query: 341 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
DS TY+ M+ K ++ A LL +++G +++D L +G EA +
Sbjct: 504 APDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQ 563
Query: 399 IQSKIRMAKIS 409
+ +++ K+S
Sbjct: 564 MFDRMKDMKLS 574
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 175/363 (48%), Gaps = 3/363 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D + F D ++M G PDVVT+ L+ + + D M + G
Sbjct: 338 LLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQG 397
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P++ +YN+L+ L + G+ ++A ++ M + P T+NI ++ K+ T A+
Sbjct: 398 ILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAV 457
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F ++ G VP +V N + L + GRLR A+ + L ++G AP+++TY +MKC
Sbjct: 458 ETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCY 517
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + +LS M R G D ++I + K GR+ EA ++M + +
Sbjct: 518 SKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTV 577
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTL++ KEG+++ A L + M ++ + + L+D CK ++ A
Sbjct: 578 VTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSK 637
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---DSFTYSSMVHNLCKAKRL 358
M + ++ YN ++ L K+ K++HA F ++ D T +++ L K ++
Sbjct: 638 MTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQI 697
Query: 359 PSA 361
A
Sbjct: 698 GDA 700
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 154/326 (47%), Gaps = 1/326 (0%)
Query: 15 GYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 73
Y I ++ ++ GISP + +YN LI + DL +M +G PD +++N L+
Sbjct: 771 AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830
Query: 74 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 133
+ GK E ++++MI P T+NI+++ L K+ D AL F L F
Sbjct: 831 AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFR 890
Query: 134 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 193
P TY LI GL K GRL A + +E+ D G PN + ++ + + ++
Sbjct: 891 PTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQL 950
Query: 194 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 253
M +G D Y ++ GR+ EA Y ++ + G+ D ++YN +IN K
Sbjct: 951 FKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGK 1010
Query: 254 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
++E A L +EM +G D YT+ L+ L AG ++ A+ E + G + ++
Sbjct: 1011 SQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFT 1070
Query: 314 YNCIVDRLGKDGKIDHAINVFESMEV 339
YN ++ +HA V+++M V
Sbjct: 1071 YNALIRGYSLSENPEHAYTVYKNMMV 1096
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 147/304 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ FD + + MR+ GI P++ TYN+LI G R + +L LL M +
Sbjct: 372 ILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESV 431
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P ++YN + + G+ +A F+ M + P N L L + A
Sbjct: 432 GVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREA 491
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
MF GL+++G P+ VTYN+++K K G++ A +L E+ +G P+ I +++
Sbjct: 492 KTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDS 551
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ + ++ MK + Y T+++ K GR+++A + E M+ +
Sbjct: 552 LYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPN 611
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+S+NTL++ +CK ++E A + +M + D T+ +I GL K + A
Sbjct: 612 TISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFH 671
Query: 301 YMNK 304
+ K
Sbjct: 672 QLKK 675
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 88/178 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID + + + M + G P+ +N LI G + + L M+ G
Sbjct: 899 LIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEG 958
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+ SY L+ CL G+ DEA F ++ L P +N ++NGL K++ + AL
Sbjct: 959 IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEAL 1018
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
++ ++ G VP+L TYN L+ L AG + A+ + +EL +G P+ TY +++
Sbjct: 1019 ALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIR 1076
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 142/347 (40%), Gaps = 39/347 (11%)
Query: 101 TATFNIMLNGL-------------------CKNRYTDNALRMFRGL-------------- 127
T T N ML L R D L +F+ L
Sbjct: 122 TETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLN 181
Query: 128 --QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 185
+K GFV +YN LI L ++G A + + + G P+ TY+ +M + R
Sbjct: 182 KMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKR 241
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
++ + +L M+ G + + + I + G++ EA + +M +G D+V+Y
Sbjct: 242 DSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYT 301
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
LI+ C G+LE A L +M+ G + D+ + L+D G++ + M
Sbjct: 302 VLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEAD 361
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 361
G+ ++ + +VD L K D A F+ M + + TY++++ L +A R+ A
Sbjct: 362 GYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDA 421
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
KLL + GV+ +D SG +A + K++ I
Sbjct: 422 LKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGI 468
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 72/139 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C D N ++ G+ PD + YN +I G ++ + +L L +EM
Sbjct: 968 ILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNR 1027
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD+++YNSLM L G ++A R+++++ L P T+N ++ G + ++A
Sbjct: 1028 GIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHA 1087
Query: 121 LRMFRGLQKHGFVPELVTY 139
+++ + G P + TY
Sbjct: 1088 YTVYKNMMVDGCNPNIGTY 1106
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 203/421 (48%), Gaps = 17/421 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ +CQ + L +M + G PD+VT+ SLI G + + ++ ++++M+EM
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PDV Y +++ L + G + A +F M + P + ++NGLC + +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI--- 177
+ RG+ K P+++T+N LI K G+ A + E+ APN TYT++
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 178 --MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
M+ C + ++ M+ KG D Y ++I F K ++ +A +M
Sbjct: 292 FCMEGCVDEAR-----QMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK 346
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G+ + ++Y TLI + + GK A + M +G + T+ +L+ LC G +K A
Sbjct: 347 GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKA 406
Query: 296 RLHLEYMNKIGFD---SNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSM 348
+ E M K D N+ YN ++ L +GK++ A+ VFE M ++ TY+ +
Sbjct: 407 LMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTII 466
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+ +CKA ++ +A L S GV+ ++ GL G + EA + K++ +
Sbjct: 467 IQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Query: 409 S 409
S
Sbjct: 527 S 527
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 175/394 (44%), Gaps = 42/394 (10%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
+ F+ + M E+ P ++ + L+ + ++L D + MG+ D+++
Sbjct: 51 LQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTC 110
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG------------------- 110
N LM+C Q +P A+ M+ P TF ++NG
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 111 ----------------LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
LCKN + + AL +F ++ +G P++V Y L+ GLC +GR R
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
A +L+ + P+ IT+ ++ + K+ E+ + M R + F Y ++I
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
F G + EA M T G D+V+Y +LIN +CK K++ A + EM ++G
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
+ T+T LI G + G A+ +M G N+ YN ++ L +GK+ A+ +F
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 335 ESMEVKDS-------FTYSSMVHNLCKAKRLPSA 361
E M+ ++ +TY+ ++H LC +L A
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 137/300 (45%), Gaps = 5/300 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F + N L K + AL R L +V Y +++ + + A + +
Sbjct: 6 FQLHRNRLVKGN-SGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMV 64
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+S P+ I +T ++ + +K+ + + + ++ G + D + ++ F + +
Sbjct: 65 ESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPY 124
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A+ ++ +M+ G + DIV++ +LIN +C ++E A ++++M + G + D +T +I
Sbjct: 125 LASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTII 184
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
D LCK G++ A + M G ++ Y +V+ L G+ A ++ M +
Sbjct: 185 DSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK 244
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D T+++++ K + A +L ++ + ++++G GC EA+++
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 190/385 (49%), Gaps = 6/385 (1%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
C+ + + ++M GI+P +V+YN +I G + + + ++++ ++E G+ P+
Sbjct: 442 CELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNA 501
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
+Y LM F+ G + A +F M+ + P TFN ++NGLCK A
Sbjct: 502 ITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNT 561
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
K F+P +TYN +I G K G + +A + +E+ S +PN ITYT+++ ++ K
Sbjct: 562 FIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNK 621
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
L L++ MKRKG D Y T+IA F K+ ++ A + +++ G+ + + YN
Sbjct: 622 MDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNI 681
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKI 305
+I+ Y +EAA L EM CD +T LIDGL K G + A L+ E + +
Sbjct: 682 MISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCR- 740
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 361
G ++ YN +++ L G++++A + + M+ Y++++ K L A
Sbjct: 741 GIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEA 800
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDG 386
+L L G+ + +V+G
Sbjct: 801 FRLHDEMLDKGLVPDDTTYDILVNG 825
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 190/406 (46%), Gaps = 44/406 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ + + + + RM+ G+ P V N L+ G + +LL + LLD +E
Sbjct: 367 VLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVEN 426
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI V +YN ++ L +LGK +EA ++ MI +TP ++N M+ G CK D+A
Sbjct: 427 GIA-SVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDA 485
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ G+ + G P +TY IL++G K G A + ++ +G P T+ +I+
Sbjct: 486 HEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIING 545
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + L+ ++ + Y +I +VK G + A +M + +
Sbjct: 546 LCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPN 605
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA----- 295
+++Y +LIN +CK K++ A + D+M+++G E D + LI G CK +++ A
Sbjct: 606 VITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFS 665
Query: 296 -------------------------------RLHLEYM-NKIGFDSNLEAYNCIVDRLGK 323
LH E + NKI D L+ Y ++D L K
Sbjct: 666 KLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCD--LKIYTSLIDGLLK 723
Query: 324 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
+GK+ A++++ M V D F Y+ +++ LC +L +A K+L
Sbjct: 724 EGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKIL 769
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 174/353 (49%), Gaps = 4/353 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C+ D + ++N + E+G+ P+ +TY L+ G+ + + ++ D+M+ G
Sbjct: 472 MILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAG 531
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P +++NS+++ L ++G+ EA I P + T+N +++G K D+A
Sbjct: 532 IVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAE 591
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++R + + P ++TY LI G CK+ ++ A + ++ G + Y T++
Sbjct: 592 SVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGF 651
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + + S + G T + Y +I+A+ + ++ A + ++M+ + + D+
Sbjct: 652 CKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDL 711
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
Y +LI+ KEGKL A L EM +G D + + +LI+GLC G ++ A L+
Sbjct: 712 KIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKE 771
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVH 350
M+ + YN ++ K+G + A + + M V D TY +V+
Sbjct: 772 MDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVN 824
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 169/368 (45%), Gaps = 5/368 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I A C+ D ++ E G P TY ++I R +L L DEM++
Sbjct: 262 IVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDS 321
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+P +V SL+ G + A R+F +++ +TP A F++++ K + A
Sbjct: 322 RVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKA 381
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ ++ G P + N L+KG K L A +L ++G A + +TY ++
Sbjct: 382 NELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIA-SVVTYNIVLLW 440
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K + M KG T Y +I K G + +A + M ++ G++ +
Sbjct: 441 LCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPN 500
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++Y L+ K+G E A+ + D+M G YT +I+GLCK G + AR L
Sbjct: 501 AITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLN 560
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDS-FTYSSMVHNLCKAK 356
K F YNCI+D K+G ID A +V+ M E+ + TY+S+++ CK+
Sbjct: 561 TFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSN 620
Query: 357 RLPSASKL 364
++ A K+
Sbjct: 621 KMDLALKM 628
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 184/430 (42%), Gaps = 46/430 (10%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M E G+ P V N L+ R +++ + L DEM E I D ++ LM + GK
Sbjct: 178 MLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGK 237
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY-- 139
EA R F L A+++I++ +C+ D A ++ G ++ G+VP TY
Sbjct: 238 FVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAA 297
Query: 140 ----------------------------NI-----LIKGLCKAGRLRTARWILKELGDSG 166
N+ LIKG C G + +A + E+ + G
Sbjct: 298 VIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVG 357
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
PN ++ +++ C + + E+ + MK G F ++ F K L+ A
Sbjct: 358 VTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAY 417
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
++ V +G+ +V+YN ++ C+ GK+ A L D+M +G ++ +I G
Sbjct: 418 LLLDGAVENGIA-SVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGH 476
Query: 287 CKAGNIKGARLHLEYMNKI---GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----V 339
CK G + A E MN I G N Y +++ K G +HA N+F+ M V
Sbjct: 477 CKKGCMDDAH---EVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIV 533
Query: 340 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+T++S+++ LCK R+ A L + +K ++DG G A+ +
Sbjct: 534 PTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESV 593
Query: 400 QSKIRMAKIS 409
++ ++IS
Sbjct: 594 YREMCRSEIS 603
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 144/342 (42%), Gaps = 3/342 (0%)
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 124
D +N L+ + K EA F+ M+ + P N++L + + ++A R+F
Sbjct: 151 DSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLF 210
Query: 125 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
+ + + T +L++ K G+ A + G +A +Y+ +++ R
Sbjct: 211 DEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRG 270
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
L +++ + G+ Y VI A V++G EA ++MV V +++
Sbjct: 271 SDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVA 330
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
+LI YC G + +A L DE+ + G + ++LI+ K GN++ A M
Sbjct: 331 TSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKC 390
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDSFTYSSMVHNLCKAKRLPSA 361
+G + N ++ K +++A + + + TY+ ++ LC+ ++ A
Sbjct: 391 MGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEA 450
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L + G+ + ++ G GC +A ++ + I
Sbjct: 451 CNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGI 492
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I AY + +A + M I D+ Y SLI G + LS +LDL EML
Sbjct: 681 IMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCR 740
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD++ YN L++ L G+ + A ++ ++M ++TP +N ++ G K A
Sbjct: 741 GIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEA 800
Query: 121 LRMFRGLQKHGFVPELVTYNILIKG 145
R+ + G VP+ TY+IL+ G
Sbjct: 801 FRLHDEMLDKGLVPDDTTYDILVNG 825
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 183/377 (48%), Gaps = 7/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++A C+ F+ +L+ MR G +P++VTYN +I G R + + DLL+ +
Sbjct: 182 VLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSY 241
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD SY +L+ L + D+ +F +M+ + P TF++++ C+ + A
Sbjct: 242 GCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERA 301
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + + +H NI+I +CK GR+ A L +G G P+ I+YTT++K
Sbjct: 302 IQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKG 361
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R ++ E+L M R + + T I + G +++A +EQM G +
Sbjct: 362 LCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVG 421
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YN L+N +C +G +++A L M + + T+T L+ GLC A + A +
Sbjct: 422 VVTYNALVNGFCVQGHIDSALELFRSMPCKP---NTITYTTLLTGLCNAERLDAAAELVA 478
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M N+ +N +V+ + G +D AI + E M + TY+++ + K
Sbjct: 479 EMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDC 538
Query: 357 RLPSASKLLLSCLKSGV 373
A +LL + GV
Sbjct: 539 SSEDALELLHGLVSKGV 555
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 183/382 (47%), Gaps = 40/382 (10%)
Query: 21 RMREAGISP-DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 79
R E SP DV YN+L+AG R L + L+ M + PD ++Y L+ L
Sbjct: 99 RAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIRVLCDR 155
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
G+ +A + DM+ P T+ ++L +CKN + A+ + ++ G P +VTY
Sbjct: 156 GRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTY 215
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
N++I G+C+ GR+ AR +L L G P+ ++YTT++K ++++ E+ + M
Sbjct: 216 NVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMME 275
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
K + + +I F + G ++ A ++QM + N +IN CK+G+++
Sbjct: 276 KNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDD 335
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKA------------------------------ 289
A+ L+ M G D ++T ++ GLC+A
Sbjct: 336 AFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFIC 395
Query: 290 -----GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-DSF 343
G I+ A + +E M + G + YN +V+ G ID A+ +F SM K ++
Sbjct: 396 ILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTI 455
Query: 344 TYSSMVHNLCKAKRLPSASKLL 365
TY++++ LC A+RL +A++L+
Sbjct: 456 TYTTLLTGLCNAERLDAAAELV 477
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 167/377 (44%), Gaps = 7/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLI +C+ + +L +M E + + N +I + + + L+ M
Sbjct: 287 MLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSY 346
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD SY +++ L + + ++A + ++M+ + P TFN + LC+ + A
Sbjct: 347 GCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQA 406
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + +Q+HG +VTYN L+ G C G + +A + + + PN ITYTT++
Sbjct: 407 IMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTG 463
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ E+++ M + + + ++ F + G L EA + +EQM+ G +
Sbjct: 464 LCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPN 523
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++YNTL + K+ E A LL + +G D T + +I L K ++ A
Sbjct: 524 LITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFH 583
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
IG YN I+ L K +ID+AI+ M + + TY ++ L +
Sbjct: 584 LAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREG 643
Query: 357 RLPSASKLLLSCLKSGV 373
L A LL GV
Sbjct: 644 LLKEAQDLLSMLCSRGV 660
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 134/295 (45%), Gaps = 36/295 (12%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR---------- 156
++ LC+ T +A R+ R + G ++ YN L+ G C+ G L AR
Sbjct: 81 LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVAP 140
Query: 157 ------WILKELGDSGHA----------------PNAITYTTIMKCCFRNRKYKLGLEIL 194
+++ L D G PN +TYT +++ +N ++ + +L
Sbjct: 141 DAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVL 200
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
M+ KG T + Y +I + GR+ +A D + ++ + G Q D VSY TL+ C
Sbjct: 201 DEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCAS 260
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
+ + L EM ++ ++ T +LI C+ G ++ A L+ M + +N
Sbjct: 261 KRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLC 320
Query: 315 NCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 365
N +++ + K G++D A +M D+ +Y++++ LC+A+R A +LL
Sbjct: 321 NIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELL 375
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 105/241 (43%), Gaps = 7/241 (2%)
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
+ G P++ LI+ LC+ GR A +L+ SG + Y T++ R
Sbjct: 68 RDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLD 127
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
++ +M D + Y +I GR+ +A ++ M+ G Q ++V+Y L+
Sbjct: 128 AARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLL 184
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
CK E A +LDEM +G + T+ ++I+G+C+ G + AR L + G
Sbjct: 185 EAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQ 244
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
+ +Y ++ L + D +F M K + T+ ++ C+ + A ++
Sbjct: 245 PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQV 304
Query: 365 L 365
L
Sbjct: 305 L 305
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 17/160 (10%)
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
L +E AA L+ + G D Y T LI LC+ G A L G
Sbjct: 49 LIAREDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPV 108
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEV-KDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
++ AYN +V + G +D A + SM V D++TY+ ++ LC R+ A LL
Sbjct: 109 DVFAYNTLVAGYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDM 168
Query: 369 LKSGVR--------ILKSAQK--------AVVDGLRHSGC 392
L+ G + +L++ K AV+D +R GC
Sbjct: 169 LRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGC 208
>gi|15222150|ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g13040, mitochondrial; Flags: Precursor
gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis thaliana]
gi|332190841|gb|AEE28962.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 174/369 (47%), Gaps = 5/369 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
I C+ FD +L+ M G PD+ +N + R + + ++ M++ G
Sbjct: 85 FISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRG 144
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV SY L++ LF+ GK +A ++ MI ++P ++ GLC R D A
Sbjct: 145 REPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAY 204
Query: 122 RMFRGLQKHGFVP-ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
M K V V YN LI G CKAGR+ A + + G P+ +TY ++
Sbjct: 205 EMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNY 264
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ N K +++ M R G D + Y ++ ++ + ++M + + D
Sbjct: 265 YYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCD 324
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+VSY+TLI +C+ AY L +EM ++G + T+T LI + GN A+ L+
Sbjct: 325 VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLD 384
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EV-KDSFTYSSMVHNLCKAK 356
M ++G + Y I+D L K G +D A VF M E+ D+ +Y+S++ LC++
Sbjct: 385 QMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSG 444
Query: 357 RLPSASKLL 365
R+ A KL
Sbjct: 445 RVTEAIKLF 453
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 139/292 (47%), Gaps = 12/292 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ + + + M + G PD+VTYN L+ N++L + ++ EM+ G
Sbjct: 226 LISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSG 285
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTP---C-TATFNIMLNGLCKNR 115
I D +SYN L+ HC ++ PD+ + + ++ P C +++ ++ C+
Sbjct: 286 IQLDAYSYNQLLKRHC--RVSHPDKC----YNFMVKEMEPRGFCDVVSYSTLIETFCRAS 339
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
T A R+F +++ G V +VTY LIK + G A+ +L ++ + G +P+ I YT
Sbjct: 340 NTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYT 399
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
TI+ ++ + + M T D Y ++I+ + GR+ EA E M
Sbjct: 400 TILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGK 459
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
D +++ +I + KL AAY + D+M +GF D+ LI C
Sbjct: 460 ECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 144/310 (46%), Gaps = 7/310 (2%)
Query: 2 LIDAYCQFVSFDAGYTIL-NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L+ C D Y ++ ++ A + V YN+LI+G + + + L M ++
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKI 249
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN L++ + A V +M+ + ++N +L C+ + D
Sbjct: 250 GCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKC 309
Query: 121 LR-MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
M + ++ GF ++V+Y+ LI+ C+A R A + +E+ G N +TYT+++K
Sbjct: 310 YNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIK 368
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
R + ++L M G + D Y T++ K G + +A M+ +
Sbjct: 369 AFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITP 428
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHTILIDGLCKAGNIKGARL 297
D +SYN+LI+ C+ G++ A L ++M +G EC D+ T +I GL + + A
Sbjct: 429 DAISYNSLISGLCRSGRVTEAIKLFEDM--KGKECCPDELTFKFIIGGLIRGKKLSAAYK 486
Query: 298 HLEYMNKIGF 307
+ M GF
Sbjct: 487 VWDQMMDKGF 496
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 126/292 (43%), Gaps = 5/292 (1%)
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+Y S + L + G D A +VF +M + +N + L + + A ++ +
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
+ GF TY+ I GLCK + +L ++ G P+ + + R K
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKV 130
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
++ M ++G D Y +I + G++ +A + M+ GV D + L
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAAL 190
Query: 248 INLYCKEGKLEAAY-LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
+ C K++ AY ++ +E++ + + LI G CKAG I+ A YM+KIG
Sbjct: 191 VVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIG 250
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
+ +L YN +++ + + A V M D+++Y+ ++ C+
Sbjct: 251 CEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCR 302
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 104/233 (44%), Gaps = 5/233 (2%)
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+ Y I L K+G + A + E+ S + + Y + R +++L I
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
MK G++ F Y I+ K+ + + M T G DI ++N ++L C+E K
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+ A M ++G E D ++TILI+GL +AG + A M + G + +A
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189
Query: 317 IVDRLGKDGKIDHAINV----FESMEVK-DSFTYSSMVHNLCKAKRLPSASKL 364
+V L K+D A + +S VK + Y++++ CKA R+ A L
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEAL 242
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 186/352 (52%), Gaps = 3/352 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ C+ D ++L+ M G+ P+VV+YN +I G R + + + +ML
Sbjct: 434 IMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLAR 493
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P+V +Y+ L+ F+ G ++A +F M+ ++ P TFN ++NGLCK A
Sbjct: 494 DLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEA 553
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + GF+P +TYN ++ G K G + +A + +E+ + G +PN +TYT+++
Sbjct: 554 RDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLING 613
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ + L L+ M+ KG D Y +I F K ++ A D +++ G+ +
Sbjct: 614 FCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPN 673
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHL 299
+ YN++I+ + +EAA + +M CD T+T LIDGL K G + + L++
Sbjct: 674 RIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYM 733
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHN 351
E ++K G ++ ++ +V+ L G++++A + E M+ K+ T S +++N
Sbjct: 734 EMLSK-GIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKN-MTPSVLIYN 783
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 181/360 (50%), Gaps = 4/360 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C+ + D ++ + M + P+VVTY+ LI G + +LDL D+ML +
Sbjct: 470 MILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLN 529
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P +++N++++ L ++G+ EA ++ + P T+N +++G K D+AL
Sbjct: 530 IAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSAL 589
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++R + + G P +VTY LI G CK+ R+ A E+ + G + Y+ ++
Sbjct: 590 AVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGF 649
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R + ++ + G + + Y ++I+ F + ++ A + ++M+ D + D+
Sbjct: 650 CKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDL 709
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y TLI+ KEG+L A L EM +G D T +L++GLC G ++ AR LE
Sbjct: 710 GTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEE 769
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
M++ ++ YN ++ ++G + A + + M V D TY +++ K R
Sbjct: 770 MDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 829
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 185/370 (50%), Gaps = 9/370 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ Y + ++ + + + G++ ++ TYN +++ + + + LLD M+ G
Sbjct: 401 LLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQG 459
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ P+V SYN ++ HC + G D A+ VF DM+ DL P T++I+++G K ++
Sbjct: 460 MVPNVVSYNDMILGHC--RKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEK 517
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
AL +F + P T+N +I GLCK G++ AR LK + G P+ +TY +I+
Sbjct: 518 ALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVD 577
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ L + M G + + Y ++I F K R+ A ++M G++L
Sbjct: 578 GFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLEL 637
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+ +Y+ LI+ +CK +E+A L E+ + G ++ + +I G N++ A +
Sbjct: 638 DVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWY 697
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
+ M +L Y ++D L K+G++ A +++ M V D T+ +V+ LC
Sbjct: 698 KKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNK 757
Query: 356 KRLPSASKLL 365
+L +A K+L
Sbjct: 758 GQLENARKIL 767
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 177/392 (45%), Gaps = 42/392 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ YC + D+ + N++ E G+ P+ VTY+ LI G + + + +L +M G
Sbjct: 331 LMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNG 390
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNA 120
IPP V++ NSL+ + +EA+++F + + CG T+NIM++ LCK D A
Sbjct: 391 IPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG--VANIFTYNIMMSWLCKGGKMDEA 448
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G VP +V+YN +I G C+ G + A + ++ PN +TY+ ++
Sbjct: 449 CSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDG 508
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F K G ++A D +QM++ +
Sbjct: 509 NF-----------------------------------KKGDSEKALDLFDQMLSLNIAPT 533
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++NT+IN CK G++ A L ++GF T+ ++DG K GNI A
Sbjct: 534 DFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYR 593
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + G N+ Y +++ K +ID A+ + M K D YS+++ CK +
Sbjct: 594 EMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRR 653
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
+ SA L L+ G+ + +++ G R
Sbjct: 654 DMESAQDLFFELLEVGLSPNRIVYNSMISGFR 685
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 182/398 (45%), Gaps = 9/398 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I A C+ + + G +L M+E G P T+ S+I + +L L +EM+
Sbjct: 260 IIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINC 319
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P ++ SLM G D A +F + L P T+++++ G C + + A
Sbjct: 320 GKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKA 379
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ ++ +G P + N L++G KA A + E D G A N TY +M
Sbjct: 380 SELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSW 438
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K +L M +G + Y +I + G + A+ M+ ++ +
Sbjct: 439 LCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPN 498
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+Y+ LI+ K+G E A L D+M +T +I+GLCK G + AR L+
Sbjct: 499 VVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLK 558
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
+ GF + YN IVD K+G ID A+ V+ M + TY+S+++ CK+
Sbjct: 559 NFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSN 618
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
R+ A K + G+ + +A A++DG C+R
Sbjct: 619 RIDLALKTRDEMREKGLELDVTAYSALIDGF----CKR 652
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 155/306 (50%), Gaps = 3/306 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID + + + ++M I+P T+N++I G + +S + D L LE
Sbjct: 504 ILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEE 563
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +YNS++ + G D A V+++M ++P T+ ++NG CK+ D A
Sbjct: 564 GFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLA 623
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L+ +++ G ++ Y+ LI G CK + +A+ + EL + G +PN I Y + M
Sbjct: 624 LKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNS-MIS 682
Query: 181 CFRN-RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
FR+ + L M D Y T+I +K GRL A+D +M++ G+
Sbjct: 683 GFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVP 742
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLH 298
DI++++ L+N C +G+LE A +L+EM+++ + LI G + GN+K A LH
Sbjct: 743 DIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLH 802
Query: 299 LEYMNK 304
E +++
Sbjct: 803 DEMLDR 808
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 147/308 (47%), Gaps = 3/308 (0%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
+N L++ + + + A F MIC D+ P NI+L L + ++ +
Sbjct: 153 FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV 212
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
G + T +++++ K GR+ A +E + G +A Y+ I++ +
Sbjct: 213 LRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSN 272
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
LGLE+L MK +G+ + +VI A V G + EA E+M+ G +++V +L+
Sbjct: 273 LGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLM 332
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
YC +G L++A L +++ + G +K T+++LI+G C +GNI+ A M G
Sbjct: 333 KGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIP 392
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDSFTYSSMVHNLCKAKRLPSASKLL 365
++ N ++ K + A +F+ V + FTY+ M+ LCK ++ A LL
Sbjct: 393 PSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLL 452
Query: 366 LSCLKSGV 373
+ + G+
Sbjct: 453 DNMVNQGM 460
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 188/429 (43%), Gaps = 40/429 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++AY + + N M + P V N L+ R +++ DL ++M+ G
Sbjct: 156 LLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRG 215
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I D ++ + ++ + G+ +EA F++ + ++I++ +CK ++ L
Sbjct: 216 IYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGL 275
Query: 122 RMFRGLQKHGFVPE-----------------------------------LVTYNILIKGL 146
+ +++ G+VP LV L+KG
Sbjct: 276 ELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGY 335
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C G L +A + ++ + G PN +TY+ +++ C + + E+ + MK G
Sbjct: 336 CAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSV 395
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
F +++ ++K +EA+ ++ V GV +I +YN +++ CK GK++ A LLD
Sbjct: 396 FNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDN 454
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M QG + ++ +I G C+ GN+ A M N+ Y+ ++D K G
Sbjct: 455 MVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGD 514
Query: 327 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+ A+++F+ M FT++++++ LCK ++ A L + L+ G +
Sbjct: 515 SEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNS 574
Query: 383 VVDGLRHSG 391
+VDG G
Sbjct: 575 IVDGFIKEG 583
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 125/335 (37%), Gaps = 71/335 (21%)
Query: 80 GKPDEANRVFQDMICG-----DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
G D + VF D + D FN +LN + +NA+ F + +P
Sbjct: 124 GDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIP 183
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
+ NIL+ L + R ++ EL D +
Sbjct: 184 WVPYMNILLTALVR-------RNMIGELRD----------------------------LY 208
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
+ M +G D F ++ A +K GR++EA +Y + GV+LD +Y+ +I CK+
Sbjct: 209 NKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKK 268
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
LL+EM+++G+ + T T +I GN+ A E M G NL
Sbjct: 269 PNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVA 328
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
++ G +D A+N+F + + G+
Sbjct: 329 TSLMKGYCAQGNLDSALNLFNKIT-------------------------------EDGLF 357
Query: 375 ILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
K +++G +SG +A ++ +++++ I
Sbjct: 358 PNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIP 392
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ C + IL M ++P V+ YN+LIAG R L + L DEML+
Sbjct: 749 VLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDR 808
Query: 61 GIPPDVWSYNSLMHCLFQ 78
G+ PD +Y+ L++ F+
Sbjct: 809 GLVPDDVTYDILINGKFK 826
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 212/478 (44%), Gaps = 75/478 (15%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ D +L M+ G++P + +N +I G R L +L + +M +
Sbjct: 86 LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMND-A 144
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PPD +Y L+H L + G+ +A +V Q+M+ P T +++ LC D+A
Sbjct: 145 HPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDAR 204
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHAPNAITYTTIMKC 180
+ + G +TY+ L+ GLCK RL A +L E+ G P+ +TY+T++
Sbjct: 205 ELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDG 264
Query: 181 CFRNRKYKLGLEILSAMK--RKGYTFDGF--GYC-------------------------- 210
+ + + ++I M T++ GYC
Sbjct: 265 LCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVIT 324
Query: 211 --TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
T+++AF K+GRL +A + +QMV + + D+V++ +L++ C EG++E A LL+E+
Sbjct: 325 YTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEIT 384
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV---------- 318
++G YT+ ++DG CK+ ++ A + GF N YN +V
Sbjct: 385 RRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTD 444
Query: 319 ---------------------------DRLGKDGKIDHAINVFESM----EVKDSFTYSS 347
D L +DG+ D A+ +E M V + T+++
Sbjct: 445 QALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFAT 504
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
+V LCKA + A +LL +K G AVV +G ++A ++ S++R+
Sbjct: 505 VVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRL 562
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 186/423 (43%), Gaps = 74/423 (17%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
G +L+ +R+ G+SPD V N+++A + ++ L D+M E+G YN L+H
Sbjct: 30 GPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYN-LIH 88
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
L + DEA + DM + P T N+++ GLC+ +AL ++R + P
Sbjct: 89 PLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMND-AHPP 147
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP------------------------- 169
+ +TY L+ GL KAGRLR A +L+E+ + H P
Sbjct: 148 DFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELV 207
Query: 170 ----------NAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 218
NAITY+ ++ C R + +L + R+G+T D Y TVI K
Sbjct: 208 EEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCK 267
Query: 219 IGRLKEATDYMEQ--------------------------------MVTDGVQLDIVSYNT 246
GRL++A D E+ MV D D+++Y T
Sbjct: 268 AGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTT 327
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
L++ +CK G+L+ AY L +M D T T L+DGLC G ++ A LE + + G
Sbjct: 328 LMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRG 387
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSAS 362
+ YNC+VD K ++ A + V ++ TY+ +V C+A R A
Sbjct: 388 CPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQAL 447
Query: 363 KLL 365
+ L
Sbjct: 448 QYL 450
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 191/388 (49%), Gaps = 11/388 (2%)
Query: 22 MREAGISPDVVTYNSLIAGATRNS-LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
M +AG D T+ ++ G ++ L LLDE+ + G+ PD N+++ L
Sbjct: 1 MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
A +F M T +N +++ LCK R D A+ + ++ G P + +N
Sbjct: 61 DTTTAMALFDKMAELGAVNHTTYYN-LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
++I GLC+AGRLR A + +++ D+ H P+ +TYT ++ + + + +++L M
Sbjct: 120 VVIGGLCRAGRLRHALGVYRQMNDA-HPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSA 178
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL-EA 259
+ D V+ + R+ +A + +E+M+ G+ + ++Y+ L++ CK +L EA
Sbjct: 179 RHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEA 238
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
LLL E+ ++GF D T++ +IDGLCKAG ++ A ++ ++ YN ++
Sbjct: 239 VALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA---VDIFEEMSCAPTAITYNSLIG 295
Query: 320 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
+ G +D AI + M D TY++++ CK RL A +L + + +
Sbjct: 296 GYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSP 355
Query: 376 LKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++VDGL G +A ++ +I
Sbjct: 356 DVVTFTSLVDGLCGEGRMEDALELLEEI 383
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 147/283 (51%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
E+LE G P ++ +N LMH + G+ A VF + L P +FN ++NG K
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D R+ ++ G P++ TY++LI GLCK R+ A + E+ D+G PN +T+T
Sbjct: 186 DLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFT 245
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T++ +N + L ++I M +G++ D Y T+I K G LK+A +++M
Sbjct: 246 TLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRK 305
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G++ D ++Y TLI+ CKEG LE A+ L + M K+ D +T LI GLC+ G A
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDA 365
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
L M ++G + E Y I++ K G + A + M+
Sbjct: 366 EKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQ 408
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 149/271 (54%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV++N+L+ G + L L + M
Sbjct: 141 ILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRAS 200
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + + DEAN +F +M+ L P TF +++G CKN D A
Sbjct: 201 GVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLA 260
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++R + GF P++VTYN LI GLCK G L+ AR++L E+ G P+ ITYTT++
Sbjct: 261 MDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDG 320
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + E+ M ++ D Y +I + GR +A + +M+ G++ D
Sbjct: 321 SCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPD 380
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+Y ++N +CK+G ++ A LL EM++ G
Sbjct: 381 DETYTMIMNEFCKKGDVKKASELLREMQRNG 411
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 146/283 (51%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + G+ P V S+N+LM+ +LG D
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLD 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M + P T+++++NGLCK D A +F + +G VP VT+ LI
Sbjct: 189 EGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GRL A I +++ + G +P+ +TY T++ + K +L M RKG
Sbjct: 249 DGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A + E+M+ + ++LD V Y LI C+EG+ A +
Sbjct: 309 PDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
L EM + G + D T+T++++ CK G++K A L M + G
Sbjct: 369 LREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNG 411
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 139/273 (50%), Gaps = 6/273 (2%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y ++ + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 107 VLEHLMKXKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWG 166
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ +++ T+M + G + +AM+ G D + Y +I K R+ EA
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEAN 226
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+M+ +G+ + V++ TLI+ +CK G+L+ A + +M QGF D T+ LI GL
Sbjct: 227 GLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGL 286
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF--- 343
CK G++K AR L+ M++ G + Y ++D K+G ++ A + E M +K+S
Sbjct: 287 CKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERM-IKESIRLD 345
Query: 344 --TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L+ G++
Sbjct: 346 DVVYTALIFGLCQEGRAVDAEKMLREMLRVGLK 378
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 148/335 (44%), Gaps = 6/335 (1%)
Query: 71 SLMHCLFQLGKPDEANRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
SL+ + D A+ VF ++ G F+ ++ ++ + +A+ FR +
Sbjct: 34 SLIQTVVSRKGKDSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFIRDAIECFRLTK 93
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
KH F T +++ L K + KE+ + G+ + + +M + + +
Sbjct: 94 KHSFRVPFDTCRNVLEHLMKXKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMR 153
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
L + A+ + G + T++ ++K+G L E M GVQ D+ +Y+ LI
Sbjct: 154 LAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLI 213
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
N CKE +++ A L EM G + T T LIDG CK G + A M GF
Sbjct: 214 NGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFS 273
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
++ YN ++ L K G + A + + M K D TY++++ CK L +A +L
Sbjct: 274 PDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFEL 333
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+K +R+ A++ GL G +A+K+
Sbjct: 334 RERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKM 368
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 87/172 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ D I +M G SPDVVTYN+LI G + L + LLDEM G
Sbjct: 247 LIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y +L+ + G + A + + MI + + ++ GLC+ +A
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAE 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+M R + + G P+ TY +++ CK G ++ A +L+E+ +G P +T
Sbjct: 367 KMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVPCVVT 418
>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
salt-inducible-like protein from Arabidopsis thaliana
BAC gb|AL021637 [Arabidopsis thaliana]
gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 780
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 167/340 (49%), Gaps = 1/340 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL-SCSLDLLDEMLE 59
+LI AY + + RM+E PDV TYN ++ R + + + +EML+
Sbjct: 132 VLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLK 191
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
P+++++ LM L++ G+ +A ++F DM ++P T+ I+++GLC+ D+
Sbjct: 192 CNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADD 251
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A ++F +Q G P+ V +N L+ G CK GR+ A +L+ G Y++++
Sbjct: 252 ARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLID 311
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
FR R+Y E+ + M +K D Y +I K G++++A + M + G+
Sbjct: 312 GLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISP 371
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D YN +I C G LE L EM + D THTILI +C+ G ++ A
Sbjct: 372 DTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIF 431
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
+ K G ++ +N ++D L K G++ A + MEV
Sbjct: 432 TEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEV 471
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 188/416 (45%), Gaps = 48/416 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID + D + L ++ G+S D + LI+ + + +++ M E
Sbjct: 97 LVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEF 156
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDE-----ANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
PDV++YN ++ + + +E A V+ +M+ + +P TF I+++GL K
Sbjct: 157 DCRPDVFTYNVILRVMMR----EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKG 212
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
T +A +MF + G P VTY ILI GLC+ G AR + E+ SG+ P+++ +
Sbjct: 213 RTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHN 272
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
++ DGF K+GR+ EA + + D
Sbjct: 273 ALL--------------------------DGF---------CKLGRMVEAFELLRLFEKD 297
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G L + Y++LI+ + + A+ L M K+ + D +TILI GL KAG I+ A
Sbjct: 298 GFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDA 357
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHN 351
L M G + YN ++ L G ++ + + E+ D+ T++ ++ +
Sbjct: 358 LKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICS 417
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
+C+ + A ++ KSG + A++DGL SG +EA+ + K+ + +
Sbjct: 418 MCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGR 473
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 182/437 (41%), Gaps = 46/437 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID + + + + M + I PD++ Y LI G ++ + +L LL M G
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKG 368
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD + YN+++ L G +E + +M + P T I++ +C+N A
Sbjct: 369 ISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAE 428
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL------------------- 162
+F ++K G P + T+N LI GLCK+G L+ AR +L ++
Sbjct: 429 EIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRS 488
Query: 163 --------------------GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
D+G +P+ ++Y ++ R L++L+ ++ KG
Sbjct: 489 FDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGL 548
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
+ D Y T+I ++GR +EA D + Y +L+ C++ K+ A+
Sbjct: 549 SPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKVLVAFN 606
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
L + K+ D T I+ K G + A L ++ + L Y + L
Sbjct: 607 LWMKYLKKISCLDDETAN-EIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLC 665
Query: 323 KDGKIDHAINVFESMEVKDSFTYSS----MVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
+ G+ A+ VF + K ++H LCK ++L +A ++ L L + +++
Sbjct: 666 QSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPR 725
Query: 379 AQKAVVDGLRHSGCRRE 395
++ L S + E
Sbjct: 726 VCNYLLSSLLESTEKME 742
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 125/302 (41%), Gaps = 5/302 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F ++++ L ++ D + L+ G + + +LI K G A +
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 164 DSGHAPNAITYTTIMKCCFRNRKY-KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
+ P+ TY I++ R + L + + M + + + + + ++ K GR
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
+A + M G+ + V+Y LI+ C+ G + A L EM+ G D H L
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNAL 274
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 340
+DG CK G + A L K GF L Y+ ++D L + + A ++ +M K
Sbjct: 275 LDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNI 334
Query: 341 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
D Y+ ++ L KA ++ A KLL S G+ AV+ L G E +
Sbjct: 335 KPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRS 394
Query: 399 IQ 400
+Q
Sbjct: 395 LQ 396
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 195/418 (46%), Gaps = 41/418 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C+ Y +L +M E I P+V TY L+ G R++ + ++ EM G
Sbjct: 94 IITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNG 153
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y +L+ L + G+ DEA RV + +L T ++ GLCK D+AL
Sbjct: 154 CKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDAL 213
Query: 122 RMFRGLQKHGFVPELVTYNILIKG------------------------------------ 145
+ +++ G P VTY+ L+ G
Sbjct: 214 KFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDA 273
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCKAG L AR ++EL SG P+ +TY+ ++ R ++ LE+L M+R G D
Sbjct: 274 LCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPD 333
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y T+I K + ++A +E M G ++V+YN++++ CK GK++ + + +
Sbjct: 334 VVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYE 393
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M K D T++I+++GL KAG + A E + + AY+ ++ L + G
Sbjct: 394 MMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAG 453
Query: 326 KIDHAINVFESMEVK---DSF--TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
K++ A ++ MEV D+ + +V LC AKR SA +++ + G R+ KS
Sbjct: 454 KLEEACGMYHGMEVTVAGDNICRALAGLVAALCDAKRTDSARRIVEVARERGHRVTKS 511
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 184/381 (48%), Gaps = 6/381 (1%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
EAG D + L R S S + L + G+ +Y ++ L G +
Sbjct: 12 EAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMAN 71
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+A + +++ G TP +N ++ GLC+ +A ++ + + VP + TY IL+
Sbjct: 72 QALELVREL-SGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILL 130
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
GLC++ + + AR + +E+ +G PN ITY T+++ R + L ++ +
Sbjct: 131 NGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELP 190
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D T++ K RL +A +ME+M GV+ + V+Y+ L++ + + G+L+
Sbjct: 191 TDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRF 250
Query: 264 LDEME-KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
+E + ++G + + +D LCKAG + AR +E + + G ++ Y+ +++
Sbjct: 251 FEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFA 310
Query: 323 KDGKIDHAINVFESME---VK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
+ G+ D ++ + E M VK D TYS++++ LCK ++ A +LL +G
Sbjct: 311 RAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVV 370
Query: 379 AQKAVVDGLRHSGCRREAKKI 399
+V+DGL SG E ++
Sbjct: 371 TYNSVMDGLCKSGKMDEVHRV 391
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 91/155 (58%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLI+ + + FDA +L MR G+ PDVVTY++LI + + LL+ M
Sbjct: 304 MLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAA 363
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PP+V +YNS+M L + GK DE +RV++ M+ +P T++I++NGL K D+A
Sbjct: 364 GSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSA 423
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 155
+++F ++ P+ Y+++I LC+AG+L A
Sbjct: 424 VKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEA 458
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 186/352 (52%), Gaps = 3/352 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ C+ D ++L+ M G+ P+VV+YN +I G R + + + +ML
Sbjct: 474 IMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLAR 533
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P+V +Y+ L+ F+ G ++A +F M+ ++ P TFN ++NGLCK A
Sbjct: 534 DLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEA 593
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + GF+P +TYN ++ G K G + +A + +E+ + G +PN +TYT+++
Sbjct: 594 RDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLING 653
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ + L L+ M+ KG D Y +I F K ++ A D +++ G+ +
Sbjct: 654 FCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPN 713
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHL 299
+ YN++I+ + +EAA + +M CD T+T LIDGL K G + + L++
Sbjct: 714 RIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYM 773
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHN 351
E ++K G ++ ++ +V+ L G++++A + E M+ K+ T S +++N
Sbjct: 774 EMLSK-GIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKN-MTPSVLIYN 823
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 181/360 (50%), Gaps = 4/360 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C+ + D ++ + M + P+VVTY+ LI G + +LDL D+ML +
Sbjct: 510 MILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLN 569
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P +++N++++ L ++G+ EA ++ + P T+N +++G K D+AL
Sbjct: 570 IAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSAL 629
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++R + + G P +VTY LI G CK+ R+ A E+ + G + Y+ ++
Sbjct: 630 AVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGF 689
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R + ++ + G + + Y ++I+ F + ++ A + ++M+ D + D+
Sbjct: 690 CKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDL 749
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y TLI+ KEG+L A L EM +G D T +L++GLC G ++ AR LE
Sbjct: 750 GTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEE 809
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
M++ ++ YN ++ ++G + A + + M V D TY +++ K R
Sbjct: 810 MDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 869
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 185/370 (50%), Gaps = 9/370 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ Y + ++ + + + G++ ++ TYN +++ + + + LLD M+ G
Sbjct: 441 LLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQG 499
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ P+V SYN ++ HC + G D A+ VF DM+ DL P T++I+++G K ++
Sbjct: 500 MVPNVVSYNDMILGHC--RKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEK 557
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
AL +F + P T+N +I GLCK G++ AR LK + G P+ +TY +I+
Sbjct: 558 ALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVD 617
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ L + M G + + Y ++I F K R+ A ++M G++L
Sbjct: 618 GFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLEL 677
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+ +Y+ LI+ +CK +E+A L E+ + G ++ + +I G N++ A +
Sbjct: 678 DVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWY 737
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
+ M +L Y ++D L K+G++ A +++ M V D T+ +V+ LC
Sbjct: 738 KKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNK 797
Query: 356 KRLPSASKLL 365
+L +A K+L
Sbjct: 798 GQLENARKIL 807
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 177/392 (45%), Gaps = 42/392 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ YC + D+ + N++ E G+ P+ VTY+ LI G + + + +L +M G
Sbjct: 371 LMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNG 430
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNA 120
IPP V++ NSL+ + +EA+++F + + CG T+NIM++ LCK D A
Sbjct: 431 IPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG--VANIFTYNIMMSWLCKGGKMDEA 488
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G VP +V+YN +I G C+ G + A + ++ PN +TY+ ++
Sbjct: 489 CSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDG 548
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F K G ++A D +QM++ +
Sbjct: 549 NF-----------------------------------KKGDSEKALDLFDQMLSLNIAPT 573
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++NT+IN CK G++ A L ++GF T+ ++DG K GNI A
Sbjct: 574 DFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYR 633
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + G N+ Y +++ K +ID A+ + M K D YS+++ CK +
Sbjct: 634 EMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRR 693
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
+ SA L L+ G+ + +++ G R
Sbjct: 694 DMESAQDLFFELLEVGLSPNRIVYNSMISGFR 725
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 182/398 (45%), Gaps = 9/398 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I A C+ + + G +L M+E G P T+ S+I + +L L +EM+
Sbjct: 300 IIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINC 359
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P ++ SLM G D A +F + L P T+++++ G C + + A
Sbjct: 360 GKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKA 419
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ ++ +G P + N L++G KA A + E D G A N TY +M
Sbjct: 420 SELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSW 478
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K +L M +G + Y +I + G + A+ M+ ++ +
Sbjct: 479 LCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPN 538
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+Y+ LI+ K+G E A L D+M +T +I+GLCK G + AR L+
Sbjct: 539 VVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLK 598
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
+ GF + YN IVD K+G ID A+ V+ M + TY+S+++ CK+
Sbjct: 599 NFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSN 658
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
R+ A K + G+ + +A A++DG C+R
Sbjct: 659 RIDLALKTRDEMREKGLELDVTAYSALIDGF----CKR 692
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 155/306 (50%), Gaps = 3/306 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID + + + ++M I+P T+N++I G + +S + D L LE
Sbjct: 544 ILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEE 603
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +YNS++ + G D A V+++M ++P T+ ++NG CK+ D A
Sbjct: 604 GFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLA 663
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L+ +++ G ++ Y+ LI G CK + +A+ + EL + G +PN I Y + M
Sbjct: 664 LKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNS-MIS 722
Query: 181 CFRN-RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
FR+ + L M D Y T+I +K GRL A+D +M++ G+
Sbjct: 723 GFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVP 782
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLH 298
DI++++ L+N C +G+LE A +L+EM+++ + LI G + GN+K A LH
Sbjct: 783 DIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLH 842
Query: 299 LEYMNK 304
E +++
Sbjct: 843 DEMLDR 848
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 147/308 (47%), Gaps = 3/308 (0%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
+N L++ + + + A F MIC D+ P NI+L L + ++ +
Sbjct: 193 FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV 252
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
G + T +++++ K GR+ A +E + G +A Y+ I++ +
Sbjct: 253 LRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSN 312
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
LGLE+L MK +G+ + +VI A V G + EA E+M+ G +++V +L+
Sbjct: 313 LGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLM 372
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
YC +G L++A L +++ + G +K T+++LI+G C +GNI+ A M G
Sbjct: 373 KGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIP 432
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDSFTYSSMVHNLCKAKRLPSASKLL 365
++ N ++ K + A +F+ V + FTY+ M+ LCK ++ A LL
Sbjct: 433 PSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLL 492
Query: 366 LSCLKSGV 373
+ + G+
Sbjct: 493 DNMVNQGM 500
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 188/429 (43%), Gaps = 40/429 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++AY + + N M + P V N L+ R +++ DL ++M+ G
Sbjct: 196 LLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRG 255
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I D ++ + ++ + G+ +EA F++ + ++I++ +CK ++ L
Sbjct: 256 IYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGL 315
Query: 122 RMFRGLQKHGFVPE-----------------------------------LVTYNILIKGL 146
+ +++ G+VP LV L+KG
Sbjct: 316 ELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGY 375
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C G L +A + ++ + G PN +TY+ +++ C + + E+ + MK G
Sbjct: 376 CAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSV 435
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
F +++ ++K +EA+ ++ V GV +I +YN +++ CK GK++ A LLD
Sbjct: 436 FNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDN 494
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M QG + ++ +I G C+ GN+ A M N+ Y+ ++D K G
Sbjct: 495 MVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGD 554
Query: 327 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+ A+++F+ M FT++++++ LCK ++ A L + L+ G +
Sbjct: 555 SEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNS 614
Query: 383 VVDGLRHSG 391
+VDG G
Sbjct: 615 IVDGFIKEG 623
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 128/336 (38%), Gaps = 73/336 (21%)
Query: 80 GKPDEANRVFQDMICG-----DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
G D + VF D + D FN +LN + +NA+ F + +P
Sbjct: 164 GDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIP 223
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
+ NIL+ L + R ++ EL D +
Sbjct: 224 WVPYMNILLTALVR-------RNMIGELRD----------------------------LY 248
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
+ M +G D F ++ A +K GR++EA +Y + GV+LD +Y+ +I CK+
Sbjct: 249 NKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKK 308
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHLEYMNKIGFDSNLEA 313
LL+EM+++G+ + T T +I GN ++ RL E +N G NL
Sbjct: 309 PNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMIN-CGKPMNLVV 367
Query: 314 YNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
++ G +D A+N+F + + G+
Sbjct: 368 ATSLMKGYCAQGNLDSALNLFNKIT-------------------------------EDGL 396
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
K +++G +SG +A ++ +++++ I
Sbjct: 397 FPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIP 432
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ C + IL M ++P V+ YN+LIAG R L + L DEML+
Sbjct: 789 VLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDR 848
Query: 61 GIPPDVWSYNSLMHCLFQ 78
G+ PD +Y+ L++ F+
Sbjct: 849 GLVPDDVTYDILINGKFK 866
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 193/406 (47%), Gaps = 5/406 (1%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
IDA C+ + D +L +M G PD VTYN +I G + + + EM G+
Sbjct: 269 IDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGL 328
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
PD+++ NS M L + GK EA F M P T++++L+G Y + L
Sbjct: 329 MPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLN 388
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+F ++ +G V + YNILI K G + A I ++ + G P+A TY T++
Sbjct: 389 LFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFS 448
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV-QLDI 241
R + ++ + M G D Y ++I F G L +A + + +M++ G+ + +
Sbjct: 449 RMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNT 508
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V +N++IN CKEG++ A + D + G D T LIDG G ++ A L+
Sbjct: 509 VFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDA 568
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M +G + ++ Y+ ++D ++G+ID + +F M K + TY ++H L R
Sbjct: 569 MISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGR 628
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A K+ ++SG + S ++ GL + C EA + K+
Sbjct: 629 TVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKL 674
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 184/383 (48%), Gaps = 7/383 (1%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM--GIPPDVWS 68
S DA +L+RM E G+ PD ++Y++++ +S +LDLL M++ G P+V S
Sbjct: 170 SDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVS 229
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
YN+++H F+ G+ +A +F +M+ + P T++ ++ LCK R D A + R +
Sbjct: 230 YNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMI 289
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
+GF P+ VTYN +I G G+ + + +E+ G P+ T + M ++ K K
Sbjct: 290 SNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSK 349
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
E +M KG+ D Y ++ + G + + + M +G+ D YN LI
Sbjct: 350 EAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILI 409
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
+ Y K G ++ A L+ +M+++G D +T+ +I + G + A M +G
Sbjct: 410 DAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLK 469
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-----DSFTYSSMVHNLCKAKRLPSASK 363
+ YN ++ G + A + M + ++ ++S++++LCK R+ A
Sbjct: 470 PDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQD 529
Query: 364 LLLSCLKSGVRILKSAQKAVVDG 386
+ + G R +++DG
Sbjct: 530 IFDLVIHIGERPDVITFNSLIDG 552
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 177/380 (46%), Gaps = 7/380 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD-LLDEMLE 59
+L+D C+ G+ + R + G+ DV+ N L+ +++ LL M E
Sbjct: 124 ILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPE 183
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYT 117
+G+ PD SY++++ L + + A + M+ G +P ++N +++G +
Sbjct: 184 LGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEV 243
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
A +F + + G VP++VTY+ I LCKA + A +L+++ +G P+ +TY +
Sbjct: 244 SKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCM 303
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ ++K + M R+G D F + +++ K G+ KEA ++ + M G
Sbjct: 304 IHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGH 363
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+ D+V+Y+ L++ Y EG + L + ME G D + ILID K G + A L
Sbjct: 364 KPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAML 423
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLC 353
M + G + Y ++ + G++ A++ F M D+ Y+S++ C
Sbjct: 424 IFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFC 483
Query: 354 KAKRLPSASKLLLSCLKSGV 373
L A +L+ + G+
Sbjct: 484 MHGNLVKAKELISEMMSRGI 503
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 161/355 (45%), Gaps = 1/355 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDAY + D I +M+E G+ PD TY ++IA +R L+ ++D ++M+ M
Sbjct: 407 ILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAM 466
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDN 119
G+ PD YNSL+ G +A + +M+ G P T FN ++N LCK
Sbjct: 467 GLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVE 526
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +F + G P+++T+N LI G G++ A +L + G P+ +TY+ ++
Sbjct: 527 AQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLD 586
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
RN + GL + M KG Y ++ GR A +M+ G +
Sbjct: 587 GYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTM 646
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DI + ++ C+ + A L ++ + + +ID + K + A
Sbjct: 647 DISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELF 706
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCK 354
+ ++ G N Y ++ L K+G ++ A N+F ME S +++N+ +
Sbjct: 707 DSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIR 761
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 171/382 (44%), Gaps = 7/382 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA-NR 87
P V TYN L+ R + L L+ G+ DV N L+ CL + D+A N
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH--GFVPELVTYNILIKG 145
+ M + P T +++ +L LC++ + AL + + K G P +V+YN +I G
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
+ G + A + E+ G P+ +TY++ + + R +L M G+ D
Sbjct: 237 FFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPD 296
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y +I + +G+ KE +M G+ DI + N+ ++ CK GK + A D
Sbjct: 297 KVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFD 356
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M +G + D T+++L+ G G + M G ++ YN ++D GK G
Sbjct: 357 SMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRG 416
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+D A+ +F M+ + D++TY +++ + RL A + G++
Sbjct: 417 MMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYN 476
Query: 382 AVVDGLRHSGCRREAKKIQSKI 403
+++ G G +AK++ S++
Sbjct: 477 SLIQGFCMHGNLVKAKELISEM 498
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 161/360 (44%), Gaps = 5/360 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ N M GI D YN LI + ++ ++ + +M E G+ PD W+Y +++
Sbjct: 389 LFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFS 448
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV-PEL 136
++G+ +A F MI L P T +N ++ G C + A + + G P
Sbjct: 449 RMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNT 508
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
V +N +I LCK GR+ A+ I + G P+ IT+ +++ K + +L A
Sbjct: 509 VFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDA 568
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M G D Y ++ + + GR+ + +M++ GV+ ++Y +++ +G+
Sbjct: 569 MISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGR 628
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
A + EM + G D T I++ GLC+ A + + + N+ N
Sbjct: 629 TVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINT 688
Query: 317 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++D + K K + A +F+S+ V ++ TY M+ NL K + A + KSG
Sbjct: 689 MIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSG 748
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 163/372 (43%), Gaps = 21/372 (5%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGK-------PDEANRVFQDMICGDLT------P 99
L DE+L P + N + L + P A +F + IC + P
Sbjct: 59 LFDELLRQTTPVPERALNGFLTALARAPSSATCRDGPSLAVALF-NRICREEARPRVALP 117
Query: 100 CTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWI 158
T+NI+++ C+ +F K G +++ NIL+K LC A R A +
Sbjct: 118 TVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVL 177
Query: 159 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK--GYTFDGFGYCTVIAAF 216
L + + G P+ I+Y+T++K + + + L++L M +K G + + Y TVI F
Sbjct: 178 LHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGF 237
Query: 217 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
+ G + +A + +M+ GV D+V+Y++ I+ CK ++ A L+L +M GFE DK
Sbjct: 238 FREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDK 297
Query: 277 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
T+ +I G G K M + G ++ N + L K GK A F+S
Sbjct: 298 VTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDS 357
Query: 337 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 392
M K D TYS ++H + L S +G+ S ++D G
Sbjct: 358 MAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGM 417
Query: 393 RREAKKIQSKIR 404
EA I ++++
Sbjct: 418 MDEAMLIFTQMQ 429
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 138/292 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I++ C+ I + + G PDV+T+NSLI G + + +LD M+ +G
Sbjct: 514 IINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVG 573
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV +Y++L+ + G+ D+ +F++M+ + P T T+ I+L+GL + T A
Sbjct: 574 IEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAK 633
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+M + + G ++ T I++ GLC+ A + K+LG N T++
Sbjct: 634 KMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAM 693
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ RK + E+ ++ G + Y +I +K G ++EA + M G
Sbjct: 694 YKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSS 753
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
N +I + ++G++ A L +++ + + T ++++ + G +
Sbjct: 754 RLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYR 805
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 98/231 (42%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D YC+ D G + M G+ P +TY ++ G + + + EM+E G
Sbjct: 584 LLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESG 643
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
D+ + ++ L + DEA +F+ + ++ A N M++ + K R + A
Sbjct: 644 TTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAN 703
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + G VP TY ++I L K G + A + + SG AP++ I++
Sbjct: 704 ELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVL 763
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
+ LS + K + + +++ F + G+ +E + M
Sbjct: 764 LEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIKSLPAM 814
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 197/406 (48%), Gaps = 14/406 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ + M +G+ P++VTYN+++ G + + + +L M
Sbjct: 226 IMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQ 285
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PD ++Y SL+ + + G+ +EA+++F++M+ L P +N +++G C D A
Sbjct: 286 KIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMA 345
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM-- 178
+ K G P + TYN LI L R A ++KE+ + G +P+AITY ++
Sbjct: 346 SAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILING 405
Query: 179 --KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
+C + + L E+L++ G Y +++ K R+KEA D +++ ++G
Sbjct: 406 YCRCANAKKAFLLHDEMLAS----GIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEG 461
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
V D++ +N LI+ +C ++ A+ LL +M++ D+ T ++ G C+ G ++ AR
Sbjct: 462 VLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEAR 521
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMVHN 351
+ M + G + ++N ++ + G I A V M + F TY+++V
Sbjct: 522 ELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEM-LDTGFNPTVLTYNALVQG 580
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
LCK + A +LL + G+ + +++G+ E K
Sbjct: 581 LCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENK 626
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 187/406 (46%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + C D + M+E G+ P + T NSL++ + + + L EM +
Sbjct: 157 LIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLR 216
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I V+++N +++ L + GK +A M + P T+N +++G C + + A
Sbjct: 217 IKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAAD 276
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ +++ P+ TY LI G+CK GRL A I +E+ G P+A+ Y T++
Sbjct: 277 AILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ M +KG + Y ++I A R EA ++++ G+ D
Sbjct: 337 CNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDA 396
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN LIN YC+ + A+LL DEM G + K T+T L+ L K +K A +
Sbjct: 397 ITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKK 456
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G ++ +N ++D + + A + + M+ D T+++++ C+ +
Sbjct: 457 ITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGK 516
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ A +L + G++ + ++ G G ++A ++++++
Sbjct: 517 VEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEM 562
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 199/409 (48%), Gaps = 9/409 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C D G + + M E GISP+VV Y+ LI G + L + +L M E G
Sbjct: 86 LISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERG 145
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV++Y ++ L + G+ +A +F M P T T+N+++NGLCK +A
Sbjct: 146 IQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAF 205
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH--APNAITYTTIMK 179
++F + + G E+V+YN LI GLC G+L A + L + G+ P+ IT+ T+++
Sbjct: 206 KIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQ 265
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + +EI M +G + F +I ++K G + +A + +++ G+
Sbjct: 266 GLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVP 325
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+Y+ +I+ +CK L A L M+ G + + L+ LCK +++ AR
Sbjct: 326 SSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLF 385
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
+ M + + + ++N ++D K G I A + M+ D++TYSS ++ L K
Sbjct: 386 QEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKL 445
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++ A S + SG+ +++ G G E +++ + +R
Sbjct: 446 GQMEEAKGAFDSMIASGITPDNHVYDSLIKGF---GLNDEIEEVINLLR 491
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 188/403 (46%), Gaps = 6/403 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ + +L M+ G+ DVV Y++LI+G L L DEMLE
Sbjct: 50 ILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEK 109
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+V Y+ L++ + G EA V M + P T+ M+ GLCK+ A
Sbjct: 110 GISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKA 169
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F + + G P VTYN+LI GLCK G + A I + + + G ++Y T++
Sbjct: 170 LDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMG 229
Query: 181 CFRNRKYKLGLEILSAMKRKG--YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
N K +++ S++ G D + TVI K GRL +A + + M+ G
Sbjct: 230 LCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSF 289
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
++ + + LI Y K G ++ A L + K G T++++IDG CK + A+
Sbjct: 290 GNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGL 349
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
M G L YN ++ L K+ ++ A +F+ M+ D+ +++ M+ K
Sbjct: 350 FSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLK 409
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
A + SA +LL + G+ + ++ L G EAK
Sbjct: 410 AGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAK 452
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 166/350 (47%), Gaps = 6/350 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M+ I PD+V+YN++I G + L ++DLL EM P+ ++Y LM L + G+
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
+EA R+ +M L ++ +++G C D +F + + G P +V Y+
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
LI G CK G R A +L + + G P+ TYT ++ ++ + + L++ M KG
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
Y +I K G + +A E M+ G +L++VSYNTLI C GKL+ A
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240
Query: 262 LLLDEMEKQG--FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
L + + G E D T +I GLCK G + A + M + G NL + ++
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIG 300
Query: 320 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
K G ID A+ +++ + V S TYS M+ CK L A L
Sbjct: 301 EYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLF 350
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 190/409 (46%), Gaps = 6/409 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ + +L M + P+ TY L+ G + + ++ LL EM G
Sbjct: 16 IINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKG 75
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ DV Y++L+ G D +F +M+ ++P ++ ++NG CK A
Sbjct: 76 LEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREAT 135
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P++ TY +I GLCK GR R A + + + G P+ +TY ++
Sbjct: 136 AVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGL 195
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG--VQL 239
+ +I M KG + Y T+I G+L EA ++ DG V+
Sbjct: 196 CKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEP 255
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D++++NT+I CKEG+L+ A + D M ++G + +T ILI K+G I A
Sbjct: 256 DVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELW 315
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ ++K+G + Y+ ++D K ++ A +F M++ F Y++++ +LCK
Sbjct: 316 KRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKE 375
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
L A +L +S + ++DG +G AK++ + ++
Sbjct: 376 SSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQ 424
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 134/250 (53%), Gaps = 4/250 (1%)
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
+++ +P++V+YN +I GLCK RL A +L E+ S PN+ TY +M + +
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
+ + +L MKRKG D Y T+I+ F G L ++M+ G+ ++V Y+
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
LIN +CK+G A +L M ++G + D YT+T +I GLCK G + A + M + G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 362
+ + YN +++ L K+G I A +FE+M K + +Y++++ LC +L A
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240
Query: 363 KLLLSCLKSG 372
KL S L+ G
Sbjct: 241 KLFSSLLEDG 250
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 158/322 (49%), Gaps = 2/322 (0%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + M E G P VTYN LI G + + + + + MLE G +V SYN+L+ L
Sbjct: 172 LFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLC 231
Query: 78 QLGKPDEANRVFQDMICGD--LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
GK DEA ++F ++ + P TFN ++ GLCK D A+ ++ + + G
Sbjct: 232 NNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGN 291
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
L T +ILI K+G + A + K + G P++ TY+ ++ + + S
Sbjct: 292 LFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFS 351
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
MK G + F Y T++A+ K L++A ++M + D +S+N +I+ K G
Sbjct: 352 RMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAG 411
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
+ +A LL++M++ G D YT++ I+ L K G ++ A+ + M G + Y+
Sbjct: 412 DIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYD 471
Query: 316 CIVDRLGKDGKIDHAINVFESM 337
++ G + +I+ IN+ M
Sbjct: 472 SLIKGFGLNDEIEEVINLLRQM 493
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 143/284 (50%), Gaps = 3/284 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG--ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
LI C D + + + E G + PDV+T+N++I G + L ++++ D M+E
Sbjct: 226 LIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIE 285
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G ++++ + L+ + G D+A +++ + L P + T+++M++G CK +
Sbjct: 286 RGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNF 345
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +F ++ G P L YN L+ LCK L AR + +E+ +S P+ I++ ++
Sbjct: 346 AKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMID 405
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ E+L+ M++ G T D + Y + I K+G+++EA + M+ G+
Sbjct: 406 GTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITP 465
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD-KYTHTIL 282
D Y++LI + ++E LL +M G D + T++IL
Sbjct: 466 DNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSIL 509
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 129/239 (53%), Gaps = 4/239 (1%)
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
P+ ++Y TI+ + ++ + +++L M+ + F YC ++ K GR++EA
Sbjct: 8 PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+ +M G+++D+V Y+TLI+ +C +G L+ L DEM ++G + ++ LI+G CK
Sbjct: 68 LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFT 344
G + A L M + G ++ Y C++ L KDG+ A+++F+ M E + T
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVT 187
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
Y+ +++ LCK + A K+ + L+ G R+ + ++ GL ++G EA K+ S +
Sbjct: 188 YNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSL 246
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 98/205 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI Y + D + R+ + G+ P TY+ +I G + +L+ + L M
Sbjct: 297 ILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKIS 356
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P ++ YN+LM L + ++A R+FQ+M + P T +FNIM++G K +A
Sbjct: 357 GLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSA 416
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +Q+ G P+ TY+ I L K G++ A+ + SG P+ Y +++K
Sbjct: 417 KELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKG 476
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFD 205
N + + + +L M G D
Sbjct: 477 FGLNDEIEEVINLLRQMADMGVILD 501
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 157/294 (53%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ +C ++++++ G P+VV YN++I N + +LD+L+ M +MG
Sbjct: 149 LVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMG 208
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV +YNSL+ LF GK + R+ DM+ + P TF+ M++ K A
Sbjct: 209 IRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAK 268
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + + P +VTYN LI GLC G L A+ +L + G PNA+TY T++
Sbjct: 269 KQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGY 328
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++++ ++IL M G D F Y T+ + + G+ A + +MV+ GV DI
Sbjct: 329 CKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDI 388
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
++N L++ C+ GK+E A + L++++K T+ I+I G+CKA ++ A
Sbjct: 389 YTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDA 442
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 198/407 (48%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + ++A ++ + GIS D+ ++++LI R S LS +L L +M+++G
Sbjct: 79 LLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLG 138
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + ++ SL++ + + EA + ++ P +N +++ LC+NR D AL
Sbjct: 139 FEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTAL 198
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++K G P+++TYN LI L +G+ + IL ++ G P+ IT++ ++
Sbjct: 199 DVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVF 258
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + M ++ + Y ++I G L EA + MV+ G +
Sbjct: 259 GKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNA 318
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTL+N YCK +++ A +L M G + D +T+ L G C+AG A L
Sbjct: 319 VTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLAR 378
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKR 357
M G ++ +N ++D L + GKI+ A+ E ++ ++ TY+ ++ +CKA +
Sbjct: 379 MVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANK 438
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A L S GV ++ GLR EA ++ K++
Sbjct: 439 VEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMK 485
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 106/198 (53%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C D +LN M G P+ VTYN+L+ G ++ + ++ +L M G
Sbjct: 289 LINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDG 348
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D ++YN+L Q G+ + A +V M+ + P TFN++L+GLC++ + AL
Sbjct: 349 VDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKAL 408
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
LQK V ++TYNI+IKG+CKA ++ A ++ L G +P+ ITYTT+M
Sbjct: 409 VKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGL 468
Query: 182 FRNRKYKLGLEILSAMKR 199
R R + E+ MK+
Sbjct: 469 RRKRLWLEAHELYRKMKK 486
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 194/403 (48%), Gaps = 4/403 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ AYCQF D LN M+E I P T NSL++ + + + + + +EM++M
Sbjct: 152 LLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKM 211
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I + ++N +++ L + GK +A M + P T+N ++NG C + A
Sbjct: 212 NIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAA 271
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F+ ++ P+ TYN I LCK R+ A +L +L +SG PNA+TY ++
Sbjct: 272 SKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDG 331
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C M +G F Y +I A R++EA D +++M GV+ D
Sbjct: 332 CCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPD 391
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YN IN YC+ G + A L DEM ++ T+T LID K + A +
Sbjct: 392 VVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFK 451
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
K G ++ +N ++D +G ID A + + M+ V D T+++++ C+ +
Sbjct: 452 KSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRER 511
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
++ A KLL + G++ + ++ G G ++A ++
Sbjct: 512 KVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEV 554
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 168/339 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ YC F+A I M++ + PD TYNS I+ + + + +L ++LE G
Sbjct: 258 VINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESG 317
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +YN+L+ G D+A +M+ + T+N++++ L + + A
Sbjct: 318 LVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAE 377
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + +++ G P++VTYNI I G C+ G + A + E+ + P TYT+++
Sbjct: 378 DMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVF 437
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + E ++G D + +I G + A +++M V D
Sbjct: 438 GKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDE 497
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++NTL+ YC+E K+E A LLDEM+++G + D ++ LI G K G++K A +
Sbjct: 498 VTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDE 557
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
M +GFD L YN ++ K G+ DHA + M+ K
Sbjct: 558 MLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSK 596
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 145/285 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C D + + M GI V TYN LI + + D++ EM E G
Sbjct: 328 LIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKG 387
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +YN ++ + G +A +F +M+ ++ P T+ +++ K A
Sbjct: 388 VEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAE 447
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F+ K G +P+++ +N LI G C G + A +LKE+ ++ P+ +T+ T+M+
Sbjct: 448 EKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGY 507
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R RK + ++L MK +G D Y T+I+ + K G +K+A + ++M++ G +
Sbjct: 508 CRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTL 567
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
++YN LI Y K G+ + A LL EM+ +G D T+ +I+ +
Sbjct: 568 LTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAM 612
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 156/323 (48%), Gaps = 6/323 (1%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
++ L+ Q KPDEA M ++ P T T N +L+ L K A ++ +
Sbjct: 150 FDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMV 209
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKY 187
K +VT+NI+I LC+ G+ + A+ + + G PN +TY T++ C R K+
Sbjct: 210 KMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRG-KF 268
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
+ +I MK K D + Y + I+ K R++EA+ + +++ G+ + V+YN L
Sbjct: 269 EAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNAL 328
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
I+ C +G L+ A+ DEM +G +T+ +LI L I+ A ++ M + G
Sbjct: 329 IDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGV 388
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASK 363
+ ++ YN ++ + G A+++F+ M K+ TY+S++ K R+ A +
Sbjct: 389 EPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEE 448
Query: 364 LLLSCLKSGVRILKSAQKAVVDG 386
+K G+ A++DG
Sbjct: 449 KFKKSIKEGMLPDIIMFNALIDG 471
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 142/303 (46%), Gaps = 6/303 (1%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
T F+++L+ C+ R D AL ++++ +P+ T N L+ L K +++ A ++ +
Sbjct: 147 TLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYE 206
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
E+ + +T+ ++ R K+K + + M+ G + Y TVI + G
Sbjct: 207 EMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRG 266
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
+ + A+ + M ++ D +YN+ I+ CKE ++E A +L ++ + G + T+
Sbjct: 267 KFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYN 326
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
LIDG C G++ A + + M G +++ YN ++ L + +I+ A ++ + M K
Sbjct: 327 ALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREK 386
Query: 341 ----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD--GLRHSGCRR 394
D TY+ ++ C+ A L ++ +R +++D G R+
Sbjct: 387 GVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEA 446
Query: 395 EAK 397
E K
Sbjct: 447 EEK 449
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 66/113 (58%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ YC+ + +L+ M+E GI PD ++YN+LI+G ++ + +L++ DEML +G
Sbjct: 503 LMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLG 562
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
P + +YN+L+ ++G+ D A + ++M +TP +T+ ++ + N
Sbjct: 563 FDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTN 615
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 186/422 (44%), Gaps = 41/422 (9%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ M E G+ D V Y +LI G + L + + E+ E + PD YN ++CL
Sbjct: 511 LFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLC 570
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
LGK EA ++M L P T+N M+ + T AL++ G+++ P L+
Sbjct: 571 MLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLI 630
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI---- 193
TY+ LI GL +AG + A+++L E+ SG +P ++T+ +++ C + R+ L LEI
Sbjct: 631 TYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWM 690
Query: 194 -------------------------------LSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
L M +G D + +I K G L
Sbjct: 691 MNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHL 750
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
A +QM+ G+ ++ ++NTL+ G++ + ++L+EM+K+G E T+ IL
Sbjct: 751 DNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDIL 810
Query: 283 IDGLCKAGN-IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME--- 338
+ G K N ++ RL+ E + K GF + YN ++ K G + A +F M+
Sbjct: 811 VTGYGKQSNKVEAVRLYCEMVGK-GFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRG 869
Query: 339 -VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
+ S TY +V K + K L + G K ++ G EA+
Sbjct: 870 VLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEAR 929
Query: 398 KI 399
++
Sbjct: 930 RL 931
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 205/482 (42%), Gaps = 74/482 (15%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D YC+ + + + RM+ G+ DVV YNSL+AG R + + D++D M G
Sbjct: 180 LVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDG 239
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V +Y + + D+A ++++M+ + P T + ++ GLCK+ A
Sbjct: 240 VEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAY 299
Query: 122 RMFRGLQKHGFVPELVTYNILIKGL----------------------------------- 146
+FR ++K G P VTY +LI L
Sbjct: 300 ALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWL 359
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK G++ A+ + + H PN +TYT ++ + ++LS M+ K + +
Sbjct: 360 CKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNV 419
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT-------------------- 246
+ ++I VK G + +ATDYM +M G+ ++V+Y T
Sbjct: 420 VTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHE 479
Query: 247 ---------------LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
L+N K GK+E A L EM ++G D +T LIDGL K GN
Sbjct: 480 MLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGN 539
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSS 347
+ A + + + + YN ++ L GK A + E M+ D TY++
Sbjct: 540 LPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNT 599
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
M+ + + A KLL +S ++ ++ GL +G +AK + +++ +
Sbjct: 600 MIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSG 659
Query: 408 IS 409
S
Sbjct: 660 FS 661
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 196/409 (47%), Gaps = 6/409 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDA C+ + D +L+ M E ISP+VVT++S+I G + + + D + EM E
Sbjct: 389 VLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKER 448
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+V +Y +++ F+ + A V+ +M+C + + ++NGL KN + A
Sbjct: 449 GIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKA 508
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+FR + + G + + V Y LI GL K G L A + +EL + P+A+ Y + C
Sbjct: 509 EALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINC 568
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K K L M+ G D Y T+IAA + G+ +A + M ++ +
Sbjct: 569 LCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPN 628
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL- 299
+++Y+TLI + G +E A LL+EM GF TH ++ C G L +
Sbjct: 629 LITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQA-CSQGRRSDLILEIH 687
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
E+M G +++ YN +V L +G A+ V E M D+ T+++++ K+
Sbjct: 688 EWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKS 747
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
L +A L G+ + ++ GL +G E+ + ++++
Sbjct: 748 GHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMK 796
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 189/389 (48%), Gaps = 9/389 (2%)
Query: 22 MREAGISP-DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
+R GI DVV +NSL+ G + + + + + M G+ DV YNSL+ L + G
Sbjct: 164 VRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAG 223
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
+ D A + M + P T+ + + C+ D+A ++ + + G +P++VT +
Sbjct: 224 EVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLS 283
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
L+ GLCK GR A + +E+ G APN +TY ++ + ++ L +L + +
Sbjct: 284 ALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSR 343
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G D Y ++ K G++ EA D ++D + V+Y LI+ CK G ++ A
Sbjct: 344 GVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGA 403
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
+L EME++ + T + +I+GL K G + A ++ M + G D N+ Y ++D
Sbjct: 404 EQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDG 463
Query: 321 ----LGKDGKID--HAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
LG++ +D H + + E +EV + F S+V+ L K ++ A L + GV
Sbjct: 464 SFKCLGQEAALDVYHEM-LCEGVEV-NKFIVDSLVNGLKKNGKIEKAEALFREMNERGVL 521
Query: 375 ILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ ++DGL +G A K+ ++
Sbjct: 522 LDHVNYTTLIDGLFKTGNLPAAFKVGQEL 550
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 143/316 (45%), Gaps = 9/316 (2%)
Query: 101 TATFNIMLNGLC-KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL 159
T ++N++++G + AL + K G + VT N ++ GLC+ GR+ A +
Sbjct: 103 TVSYNVVMSGFSEQGGLAPEAL--LAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160
Query: 160 KELGDSG--HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 217
+ + G + + + +++ + + + MK +G D GY +++A
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLC 220
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 277
+ G + A D ++ M DGV+ ++V+Y I YC+ ++ A+ L +EM ++G D
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVV 280
Query: 278 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN----V 333
T + L+ GLCK G A M KIG N Y ++D L K + + +++ V
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEV 340
Query: 334 FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 393
V D Y++++ LCK ++ A + L ++D L +G
Sbjct: 341 VSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNV 400
Query: 394 REAKKIQSKIRMAKIS 409
A+++ S++ IS
Sbjct: 401 DGAEQVLSEMEEKSIS 416
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
D ++ ++M GISP+V T+N+L+ G + S +L+EM + GI P +Y+
Sbjct: 750 LDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDI 809
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
L+ + EA R++ +M+ P +T+N +++ K A +F +Q G
Sbjct: 810 LVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRG 869
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+P TY+IL+ G K R LK++ + G +P+ T ++I +
Sbjct: 870 VLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRA 918
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 75/145 (51%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+LN M++ GI P +TY+ L+ G + S ++ L EM+ G P V +YN+L+
Sbjct: 791 VLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFS 850
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
++G +A +F +M + P + T++I+++G K R + + +++ GF P
Sbjct: 851 KVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKG 910
Query: 138 TYNILIKGLCKAGRLRTARWILKEL 162
T + + + K G AR +LK L
Sbjct: 911 TLSSISRAFSKPGMSWEARRLLKNL 935
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G P V TYN+LI+ ++ ++S + +L +EM G+ P +Y+ L+ +L E
Sbjct: 834 GFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEV 893
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
+ +DM +P T + + K + A R+ + L K
Sbjct: 894 RKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNLYK 937
>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Brachypodium distachyon]
Length = 726
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 184/380 (48%), Gaps = 8/380 (2%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNS--LLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
++ + M+ +G SP+V +Y+ L++ T L+ + +LL EM G+ P+ +Y + ++
Sbjct: 195 SLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLY 254
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPC-TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 133
L + + A Q M+C PC T FN ++ G C+ A+ +F ++K G V
Sbjct: 255 GLSRTRQVASAWNFLQ-MLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLV 313
Query: 134 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 193
P+ +Y+IL+ GLCK G + T +L E+ +G AP ++Y++++ R K +L E+
Sbjct: 314 PDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFEL 373
Query: 194 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 253
++ +G+ D Y ++ + ++ D MV D +Y +LI +C+
Sbjct: 374 FRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCR 433
Query: 254 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
L A + + M G + T TIL+DG K I A L L + + G NL
Sbjct: 434 HRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCM 493
Query: 314 YNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 369
Y I++ L K K DH +F M V D+ YS ++ + KA +LP A +L L
Sbjct: 494 YRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKML 553
Query: 370 KSGVRILKSAQKAVVDGLRH 389
G + ++++GL H
Sbjct: 554 DEGTKPNVFTYTSLINGLCH 573
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 185/372 (49%), Gaps = 7/372 (1%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
+ +L+ M G+ P+ TY + + G +R ++ + + L + + G P + + +N+++
Sbjct: 230 AFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQ 289
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
+ G+ EA VF M G L P T +++I+++GLCK + + ++G P
Sbjct: 290 GFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAP 349
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
LV+Y+ L+ GLC+AG++ A + + L + G + I Y+ I+ C ++ ++ ++
Sbjct: 350 TLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLW 409
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
+ M + D + Y ++I AF + L +A E M+ GV ++V+ L++ + KE
Sbjct: 410 NDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKE 469
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
++ A+L L ++ + G + + ++I+GLCK M K G+ + Y
Sbjct: 470 RMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVY 529
Query: 315 NCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
+ I+D K K+ A +F M + FTY+S+++ LC RLP L +
Sbjct: 530 SIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIW 589
Query: 371 SGV---RILKSA 379
G+ RIL ++
Sbjct: 590 EGLTPDRILYTS 601
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 163/368 (44%), Gaps = 18/368 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ + + + R+ E G D + Y+ ++ G ++ + DL ++M+
Sbjct: 357 LLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHN 416
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD ++Y SL++ + +A VF+ M+ ++P T I+++G K R D A
Sbjct: 417 FVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAF 476
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ G VP L Y ++I GLCK + I ++ G+ P+ + Y+ I+
Sbjct: 477 LFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSF 536
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + M +G + F Y ++I RL E + M+ +G+ D
Sbjct: 537 VKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDR 596
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ Y +LI YCK ++AA + M K G D + +T LI G K + GA+ +E
Sbjct: 597 ILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEE 656
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSA 361
M G ++ Y ++ K G E K + TY+SM+ +A P A
Sbjct: 657 MTNKGLTPSVVTYTNLIIGYFKIGD-----------ERKANMTYNSML----QAGITPDA 701
Query: 362 SKLLLSCL 369
LSC+
Sbjct: 702 K---LSCI 706
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 180/411 (43%), Gaps = 39/411 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C+ + + M++ G+ PD +Y+ L+ G + + DLL EM G
Sbjct: 287 VIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNG 346
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P + SY+SL+H L + GK + A +F+ + ++I+LNG C++ +
Sbjct: 347 IAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVC 406
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM--- 178
++ + H FVP+ Y LI C+ L A + + + DSG +PN +T T ++
Sbjct: 407 DLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGF 466
Query: 179 --------KCCFRNRKYKLGL------------------------EILSAMKRKGYTFDG 206
F ++ + G+ I + M ++GY D
Sbjct: 467 GKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDT 526
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I +FVK +L EA +M+ +G + ++ +Y +LIN C + +L L
Sbjct: 527 VVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKH 586
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M +G D+ +T LI CK N+K A M K+G ++ Y C++ K
Sbjct: 587 MIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLA 646
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+D A + E M K TY++++ K A+ S L++G+
Sbjct: 647 MDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGI 697
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 131/281 (46%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI A+C+ + + M ++G+SP+VVT L+ G + ++ + L ++ + G
Sbjct: 427 LIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFG 486
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P++ Y +++ L ++ K D +F DMI P T ++I+++ K A
Sbjct: 487 IVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAF 546
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+F + G P + TY LI GLC RL + K + G P+ I YT+++ C
Sbjct: 547 RLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCY 606
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K LEI M + G + D F Y +I F K+ + A ME+M G+ +
Sbjct: 607 CKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSV 666
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
V+Y LI Y K G A + + M + G D IL
Sbjct: 667 VTYTNLIIGYFKIGDERKANMTYNSMLQAGITPDAKLSCIL 707
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 143/310 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++ CQ ++ + + N M PD Y SLI R+ L+ +L + + ML+
Sbjct: 391 IILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDS 450
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V + L+ + DEA + + P + +++NGLCK +D+
Sbjct: 451 GVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHV 510
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + K G+VP+ V Y+I+I KA +L A + ++ D G PN TYT+++
Sbjct: 511 WGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLING 570
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + + M +G T D Y ++I + K +K A + M G+ D
Sbjct: 571 LCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSAD 630
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
Y LI + K ++ A L++EM +G T+T LI G K G+ + A +
Sbjct: 631 AFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYN 690
Query: 301 YMNKIGFDSN 310
M + G +
Sbjct: 691 SMLQAGITPD 700
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 144/332 (43%), Gaps = 43/332 (12%)
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
++AL + +K G EL N L+K L + ++ AR + ++ SG +PN +Y+ +
Sbjct: 158 EDALLTYTEAKKVGV--ELQLCNFLLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVL 215
Query: 178 MKCCFRNRKYKL--GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
M + L E+LS M+ KG + Y T + + ++ A ++++ +
Sbjct: 216 MSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQR 275
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G + +N +I +C+EG+++ A + D M+K G D ++++IL+DGLCK G++
Sbjct: 276 GNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTG 335
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----------------- 338
L M + G L +Y+ ++ L + GK++ A +F +E
Sbjct: 336 YDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNG 395
Query: 339 ----------------------VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
V D++ Y+S+++ C+ + L A + L SGV
Sbjct: 396 CCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPN 455
Query: 377 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+VDG EA K+R I
Sbjct: 456 VVTCTILVDGFGKERMIDEAFLFLHKVRQFGI 487
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 96/222 (43%), Gaps = 39/222 (17%)
Query: 209 YCTVIAAFVKIGRLKEAT---------------------------------DYMEQMVTD 235
Y T+I FV++ ++A + M +
Sbjct: 144 YATIIRIFVELSMFEDALLTYTEAKKVGVELQLCNFLLKCLVERNQIIYARSLFDDMKSS 203
Query: 236 GVQLDIVSYNTLINLYCKEGK--LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
G ++ SY+ L++ Y + L A+ LL EME +G + + T+ + GL + +
Sbjct: 204 GPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVA 263
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
A L+ + + G N +N ++ ++G++ AI VF++M+ V D+ +YS +V
Sbjct: 264 SAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILV 323
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
LCK + + LL+ ++G+ + +++ GL +G
Sbjct: 324 DGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAG 365
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 194/407 (47%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ + +D ++ +M+ GI P + T N ++ +S + L +M+++G
Sbjct: 89 LLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLG 148
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ ++ SL++ + ++A +F ++ P T+ ++ LCKNR+ ++A+
Sbjct: 149 FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + +G P +VTYN L+ GLC+ GR A W+L+++ PN IT+T ++
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAF 268
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K E+ + M + D F Y ++I G L EA M +G +
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V Y TLI+ +CK ++E + EM ++G + T+T+LI G C G A+
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKR 357
M+ ++ YN ++D L +GK++ A+ +FE M ++ TY+ ++ +CK +
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A L S G++ ++ G G EA + K++
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 178/349 (51%), Gaps = 1/349 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ YC + + + +++ G P+VVTY +LI +N L+ +++L ++M G
Sbjct: 159 LLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNG 218
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +YN+L+ L ++G+ +A + +DM+ + P TF +++ K A
Sbjct: 219 SRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAK 278
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + + P++ TY LI GLC G L AR + + +G PN + YTT++
Sbjct: 279 ELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGF 338
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++++ + G++I M +KG + Y +I + +GR A + QM + DI
Sbjct: 339 CKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDI 398
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN L++ C GK+E A ++ + M K+ + + T+TI+I G+CK G ++ A
Sbjct: 399 RTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCS 458
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVH 350
+ G N+ Y ++ + G I A ++F+ M+ +D F + V+
Sbjct: 459 LFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK-EDGFLPNESVY 506
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 154/337 (45%), Gaps = 4/337 (1%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
+Y ++ N + +LDL M+ P + + L+ + ++ + D +F+ M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
+ P T NI+++ +C + A + K GF P+LVT+ L+ G C R+
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
A + ++ G PN +TYTT+++C +NR +E+ + M G + Y +
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
+ +IGR +A + M+ ++ +++++ LI+ + K GKL A L + M +
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
D +T+ LI+GLC G + AR M + G N Y ++ K +++ +
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349
Query: 333 VFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
+F M V ++ TY+ ++ C R A ++
Sbjct: 350 IFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI YC D + N+M PD+ TYN L+ G N + +L + + M +
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR 427
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ ++ +Y ++ + +LGK ++A +F + + P T+ M++G C+ A
Sbjct: 428 EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEA 487
Query: 121 LRMFRGLQKHGFVPELVTY 139
+F+ +++ GF+P Y
Sbjct: 488 DSLFKKMKEDGFLPNESVY 506
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 185/410 (45%), Gaps = 38/410 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI A C+ +L M PDV T+N +I G R + + LLD ML G
Sbjct: 246 LIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRG 305
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEA--------------------------------NRVF 89
D +Y LMH L ++G+ DEA + ++
Sbjct: 306 FSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLY 365
Query: 90 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
+M+ P TFNIM++GL K Y +AL + + F P ++TY ILI G CK
Sbjct: 366 NNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQ 425
Query: 150 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 209
GRL A I+ + G + N + Y ++ ++ + L++ M KG D + +
Sbjct: 426 GRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTF 485
Query: 210 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
++I K +++EA M +GV + V+YNTL++ + ++ A+ L+DEM
Sbjct: 486 NSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLF 545
Query: 270 QGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
+G D T+ LI LCK G + KG L E + K G + + N ++ L + GK++
Sbjct: 546 RGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGK-GIFPTIISCNILISGLCRTGKVN 604
Query: 329 HAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
A+ + M D TY+S+++ LCK + AS L G+R
Sbjct: 605 DALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIR 654
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 199/396 (50%), Gaps = 13/396 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C V+ + Y +L+R G+SP V T+ ++ S + + LL +M +
Sbjct: 179 ILVDGDCPRVAPNVFYDMLSR----GVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKH 234
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ Y +L+H L + + EA ++ +DM P TFN +++GLC+ A
Sbjct: 235 GCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEA 294
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + GF + +TY L+ GLC+ G++ AR +L ++ + PN + Y T++
Sbjct: 295 AKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN----PNTVLYNTLISG 350
Query: 181 CFRNRKYKLGLEIL-SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ +++ ++L + M GY D + + +I VK G L A + + +MV +
Sbjct: 351 YVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEP 410
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
++++Y LIN +CK+G+LE A +++ M +G + + LI LCK GNI+ A
Sbjct: 411 NVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLF 470
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKA 355
M+ G ++ +N +++ L K+ K++ A++++ M + ++ TY+++VH
Sbjct: 471 GEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMR 530
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ A KL+ L G + ++ L +G
Sbjct: 531 DSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTG 566
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 177/368 (48%), Gaps = 7/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTIL-NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
LI Y F+ +L N M AG PD T+N +I G + L +L+LL+EM+
Sbjct: 347 LISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAK 406
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+V +Y L++ + G+ +EA + M L+ T +N ++ LCK+ + A
Sbjct: 407 RFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEA 466
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L++F + G P++ T+N LI GLCK ++ A + ++ G N +TY T++
Sbjct: 467 LQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHA 526
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ +++ M +G D Y +I A K G +++ E+M+ G+
Sbjct: 527 FLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPT 586
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I+S N LI+ C+ GK+ A L +M +G D T+ LI+GLCK G+++ A
Sbjct: 587 IISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFN 646
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAK 356
+ G + YN ++ R +G + A + +S + + T+S +++ + K
Sbjct: 647 KLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYI--VK 704
Query: 357 RLPSASKL 364
++P ++
Sbjct: 705 KIPWGARF 712
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 175/379 (46%), Gaps = 42/379 (11%)
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
P SYN ++ L P A VF DM+ ++P TF +++ LC D+A +
Sbjct: 168 PTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSL 227
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
R + KHG VP V Y LI LC+ R+ A +L+++ P+ T+ ++ R
Sbjct: 228 LRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCR 287
Query: 184 NRKYKLGLEILSAMKRKGYTFDG--FGYC-----------------------------TV 212
+ ++L M +G++ D +GY T+
Sbjct: 288 AGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTL 347
Query: 213 IAAFVKIGRLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
I+ +V GR +EA D + MV G + D ++N +I+ K+G L +A LL+EM +
Sbjct: 348 ISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKR 407
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
FE + T+TILI+G CK G ++ A + M+ G N YNC++ L KDG I+ A+
Sbjct: 408 FEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEAL 467
Query: 332 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+F M K D +T++S+++ LCK ++ A L GV A + L
Sbjct: 468 QLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGV----IANTVTYNTL 523
Query: 388 RHSGCRREAKKIQSKIRMA 406
H+ R++ IQ ++
Sbjct: 524 VHAFLMRDS--IQQAFKLV 540
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 147/288 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ + I+N M G+S + V YN LI ++ + +L L EM
Sbjct: 417 ILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGK 476
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD++++NSL++ L + K +EA ++ DM + T T+N +++ A
Sbjct: 477 GCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQA 536
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G + +TYN LIK LCK G + + +E+ G P I+ ++
Sbjct: 537 FKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISG 596
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R K L+ L M +G T D Y ++I K+G ++EA++ ++ ++G++ D
Sbjct: 597 LCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPD 656
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
++YNTLI+ +C EG A LLL + GF ++ T +ILI+ + K
Sbjct: 657 AITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK 704
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 151/327 (46%), Gaps = 12/327 (3%)
Query: 80 GKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
G P +A R+ DM P ++N++L+ L A +F + G P + T
Sbjct: 148 GLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYT 207
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
+ +++K LC + +A +L+++ G PN++ Y T++ N + L++L M
Sbjct: 208 FGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMF 267
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
D + VI + GR+ EA +++M+ G D ++Y L++ C+ G+++
Sbjct: 268 LMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVD 327
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI--GFDSNLEAYNC 316
A LL+++ + + LI G +G + A+ L Y N + G++ + +N
Sbjct: 328 EARALLNKIPNP----NTVLYNTLISGYVASGRFEEAK-DLLYNNMVIAGYEPDAYTFNI 382
Query: 317 IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++D L K G + A+ + M K + TY+ +++ CK RL A++++ S G
Sbjct: 383 MIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKG 442
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKI 399
+ + ++ L G EA ++
Sbjct: 443 LSLNTVGYNCLICALCKDGNIEEALQL 469
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 185/373 (49%), Gaps = 9/373 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+I+ +C+ D IL M G++PDVVTY S++ G R+ + + +++ EM
Sbjct: 51 VINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLK 110
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD +++++L+ K DEA +++++++ + + ++ GLC+ R A
Sbjct: 111 GVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEA 170
Query: 121 LRMFRGLQKH---GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
+F+ ++ + P++VTY LI G CK+G L A +L + PN +TY+++
Sbjct: 171 YELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSL 230
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + L++ M KG + Y T+I ++ A M++M
Sbjct: 231 LHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCC 290
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
D VSYN L++ YC+ G++E A L EM + D+ T+T L+ G C A ++ AR
Sbjct: 291 PADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARF 350
Query: 298 HLEYM-NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
LE M G D ++ Y+ +V + + A + M + ++ TYSS++ L
Sbjct: 351 LLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGL 410
Query: 353 CKAKRLPSASKLL 365
CKA R+ A ++L
Sbjct: 411 CKAGRVNHAMEVL 423
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 201/417 (48%), Gaps = 22/417 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ + + +L M P+VVTY+SL+ G + L +LDL M G
Sbjct: 195 LIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKG 254
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +Y +L+H L K D A + +M T ++N +L+G C+ + A
Sbjct: 255 CVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAK 314
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD-SGHAPNAITYTTIMKC 180
++F+ + +P+ +TY L++G C A RL AR++L+ + +G P+ +TY+ ++
Sbjct: 315 QLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAG 374
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R +++ E + M + + Y ++I K GR+ A + ++ + + D
Sbjct: 375 YSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNV----DKPD 430
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+Y +I C + E A LL+EM + E T +I LC+ G++ A L
Sbjct: 431 VVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLV 490
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-----------DSFTYSSMV 349
M G + + Y +++ + G+++ A +FE M K +S+++
Sbjct: 491 AMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALI 550
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQK---AVVDGLRHSGCRREAKKIQSKI 403
LCKA+ + A ++ L+S R + A++ A+VDGL +G EA K+ + I
Sbjct: 551 RGLCKAREIDKAMAVVEE-LRS--RECEPAEEDCLAIVDGLLRAGRTEEAGKLINSI 604
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 198/401 (49%), Gaps = 10/401 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREA-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
++++ C+ Y +L MR+ ++PD+VTY+++I G + + + ++L EM+
Sbjct: 14 VVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVT 73
Query: 60 M-GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G+ PDV +Y S++ L + GK D A + ++M + P TF+ ++ G C R D
Sbjct: 74 RDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVD 133
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL---GDSGHAPNAITYT 175
AL++++ + + V+ + LI GLC+ R+ A + +E+ D P+ +TYT
Sbjct: 134 EALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYT 193
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
++ ++ + +++L M+ + + Y +++ K G L +A D +M +
Sbjct: 194 ALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSK 253
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G ++V+Y TLI+ C K++AA LL+DEM D ++ L+DG C+ G I+ A
Sbjct: 254 GCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEA 313
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV-----KDSFTYSSMVH 350
+ + M + Y C+V +++ A + E+M+ D TYS +V
Sbjct: 314 KQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVA 373
Query: 351 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+AKR A++ + + V +++DGL +G
Sbjct: 374 GYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAG 414
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 164/312 (52%), Gaps = 9/312 (2%)
Query: 97 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK-HGFVPELVTYNILIKGLCKAGRLRTA 155
+ P T+N+++NGLCK R T A + + ++ P+LVTY+ +I G CK G + A
Sbjct: 5 VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64
Query: 156 RWILKEL-GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
IL+E+ G AP+ +TYT+++ R+ K E++ MK KG D F + +I
Sbjct: 65 CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ---G 271
+ ++ EA ++++T +LD VS + LI C+E ++ AY L EME +
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGA 184
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
++ D T+T LIDG CK+GN++ A L M N+ Y+ ++ L K G +D A+
Sbjct: 185 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 244
Query: 332 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
++F M V + TY++++H LC A ++ +A L+ + + A++DG
Sbjct: 245 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGY 304
Query: 388 RHSGCRREAKKI 399
G EAK++
Sbjct: 305 CRLGRIEEAKQL 316
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 185/363 (50%), Gaps = 11/363 (3%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE-MGIPPDVWSYNSLMHCLFQLG 80
MRE ++P+ TYN ++ G + L S + ++L EM + + PD+ +Y+++++ + G
Sbjct: 1 MREF-VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQG 59
Query: 81 KPDEANRVFQDMICGD-LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
+ D A + ++M+ D + P T+ +++GLC++ D A M R ++ G P+ T+
Sbjct: 60 EMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTF 119
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
+ LI G C A ++ A + KE+ S +A++ + ++ R R+ E+ M+
Sbjct: 120 SALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEM 179
Query: 200 K---GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
+ + D Y +I F K G L++A + M ++V+Y++L++ CK G
Sbjct: 180 REDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGD 239
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
L+ A L M +G + T+T LI GLC A + ARL ++ M ++ +YN
Sbjct: 240 LDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNA 299
Query: 317 IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++D + G+I+ A +F+ M K D TY+ +V C A RL A + LL +K+
Sbjct: 300 LLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEA-RFLLENMKTA 358
Query: 373 VRI 375
I
Sbjct: 359 AGI 361
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 158/380 (41%), Gaps = 74/380 (19%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ D + RM G P+VVTY +LI G + + L+DEM
Sbjct: 230 LLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATC 289
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P D SYN+L+ +LG+ +EA ++F++M P T+ ++ G C + A
Sbjct: 290 CPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEAR 349
Query: 122 RMFRGLQKH-GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++ G P++VTY+I++ G +A R A ++E+ APNA+TY++++
Sbjct: 350 FLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDG 409
Query: 181 CFRNRKYKLGLEILSAMKRKG---YTFDGFGYC--------------------------- 210
+ + +E+L + + YT G C
Sbjct: 410 LCKAGRVNHAMEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTF 469
Query: 211 -TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
+VI A ++G + EA + M G++ +V+Y TL+ + + G++E AY L + M +
Sbjct: 470 NSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRR 529
Query: 270 --------------QGF-----------ECDKYTHTI-----------------LIDGLC 287
Q F E DK + ++DGL
Sbjct: 530 KAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLL 589
Query: 288 KAGNIKGARLHLEYMNKIGF 307
+AG + A + ++K+G
Sbjct: 590 RAGRTEEAGKLINSISKVGL 609
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 9/174 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C + T+L M + P V T+NS+I R + + LL M
Sbjct: 436 IVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAH 495
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM--------ICGDLTPCTATFNIMLNGLC 112
G+ P + +Y +L+ + G+ + A +F+ M +L P A F+ ++ GLC
Sbjct: 496 GLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQA-FSALIRGLC 554
Query: 113 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
K R D A+ + L+ P ++ GL +AGR A ++ + G
Sbjct: 555 KAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 608
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 195/437 (44%), Gaps = 39/437 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ + + +MRE G+SPDVVTYNSLI G + L L +EM ++
Sbjct: 235 VMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDV 294
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN L++C + K A F +M L P T++ +++ CK A
Sbjct: 295 GCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGA 354
Query: 121 LRMFRGLQKHGFVPE-----------------------------------LVTYNILIKG 145
+++ +++ G +P +VTY L+ G
Sbjct: 355 IKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDG 414
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCKAGR+ A + + + G +PN YT ++ + + + ++IL M D
Sbjct: 415 LCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPD 474
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y ++I +L+E +E+M + G+ + V T+I+ Y K GK A
Sbjct: 475 LILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQ 534
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM+ G E T+ +LIDGLC+AG ++ A + M +G N+ Y ++D L +
Sbjct: 535 EMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNN 594
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
I+ A +F+ M+ + D +++++ K L A L+ + +
Sbjct: 595 CIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYT 654
Query: 382 AVVDGLRHSGCRREAKK 398
++V G G +A+K
Sbjct: 655 SLVSGFSQCGELHQARK 671
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 184/385 (47%), Gaps = 4/385 (1%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
N M AGI+P V TYN +I + L S L +M EMG+ PDV +YNSL+ +
Sbjct: 218 FNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGK 277
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
+G +E +F +M P T+N ++N CK A F ++ +G P +VT
Sbjct: 278 VGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVT 337
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
Y+ LI CK G ++ A +L ++ +G PN TYT+++ + ++L+ M
Sbjct: 338 YSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDML 397
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
+ G + Y ++ K GR+ EA + M+ DG+ + Y L++ Y K ++E
Sbjct: 398 QAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERME 457
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A +L +M + + D + +I G C ++ +L LE M G +N I+
Sbjct: 458 DAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTII 517
Query: 319 DRLGKDGKIDHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
D K GK A+N F+ M+ V+ + TY ++ LC+A + A L G++
Sbjct: 518 DAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQ 577
Query: 375 ILKSAQKAVVDGLRHSGCRREAKKI 399
+ +++DGL + C AKK+
Sbjct: 578 PNVAVYTSLIDGLCXNNCIESAKKL 602
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 182/376 (48%), Gaps = 4/376 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC+F + + M+ G+ P+VVTY++LI + ++ ++ LL +M G
Sbjct: 306 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTG 365
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ ++Y SL+ + G EA ++ DM+ + T+ +L+GLCK A
Sbjct: 366 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 425
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + K G P Y L+ G KA R+ A ILK++ + P+ I Y +I+
Sbjct: 426 EVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGH 485
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
RK + IL MK +G + + T+I A+ K G+ +A ++ ++M GV+ I
Sbjct: 486 CSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATI 545
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y LI+ C+ G +E A M G + + +T LIDGLC I+ A+ +
Sbjct: 546 VTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDE 605
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EVKDSF---TYSSMVHNLCKAKR 357
M G ++ A+ ++D K G + A+ + M E+ F Y+S+V +
Sbjct: 606 MQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGE 665
Query: 358 LPSASKLLLSCLKSGV 373
L A K ++ G+
Sbjct: 666 LHQARKFFNEMIEKGI 681
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 164/338 (48%), Gaps = 6/338 (1%)
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
P S N L+H L + G + F DMI + P T+N+M++ LCK +N+ R+
Sbjct: 193 PKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRL 252
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
F +++ G P++VTYN LI G K G L + E+ D G P+ ITY ++ C +
Sbjct: 253 FVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCK 312
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
K E S MK G + Y T+I AF K G ++ A + M G+ + +
Sbjct: 313 FEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFT 372
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
Y +LI+ CK G L A+ LL++M + G + + T+T L+DGLCKAG + A M
Sbjct: 373 YTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSML 432
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLP 359
K G N + Y +V K +++ A+ + + M D Y S++ C ++L
Sbjct: 433 KDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKL- 491
Query: 360 SASKLLLSCLKS-GVRILKSAQKAVVDGLRHSGCRREA 396
+KL+L +KS G+ ++D +G +A
Sbjct: 492 EETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDA 529
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 168/334 (50%), Gaps = 22/334 (6%)
Query: 53 LLDEMLEMGIP-----PDVWS-----------YNSLMHCLFQLGKPDEANRVFQDMICGD 96
+++ ++MG P +WS ++ L +LG +EAN F M
Sbjct: 131 IMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFR 190
Query: 97 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 156
P + N +L+ L K+ + F + G P + TYN++I LCK G L +R
Sbjct: 191 TLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSR 250
Query: 157 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 216
+ ++ + G +P+ +TY +++ + + + + MK G D Y +I +
Sbjct: 251 RLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCY 310
Query: 217 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
K ++ A +Y +M +G++ ++V+Y+TLI+ +CKEG ++ A LL +M + G ++
Sbjct: 311 CKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNE 370
Query: 277 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
+T+T LID CKAGN+ A L M + G N+ Y ++D L K G++ A VF S
Sbjct: 371 FTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRS 430
Query: 337 MEVKDSFT-----YSSMVHNLCKAKRLPSASKLL 365
M +KD + Y+++VH KA+R+ A K+L
Sbjct: 431 M-LKDGISPNQQVYTALVHGYIKAERMEDAMKIL 463
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 129/276 (46%), Gaps = 2/276 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ Y + + IL +M E I PD++ Y S+I G L + +L+EM G
Sbjct: 446 LVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG 505
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I + +++ F+ GK +A FQ+M + T+ ++++GLC+ + A+
Sbjct: 506 ISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAV 565
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F + G P + Y LI GLC + +A+ + E+ G P+ +T ++
Sbjct: 566 DYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGN 625
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + L ++S M FD Y ++++ F + G L +A + +M+ G+ +
Sbjct: 626 LKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEE 685
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQG--FECD 275
V L+ Y K G+L+ A L +EME+ FE D
Sbjct: 686 VLCICLLREYYKRGQLDEAIELKNEMERMAYSFEFD 721
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 155/353 (43%), Gaps = 40/353 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LIDA C+ + + +LN M +AG+ ++VTY +L+ G + + + ++ ML+ G
Sbjct: 376 LIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG 435
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY----- 116
I P+ Y +L+H + + ++A ++ + M ++ P + ++ G C R
Sbjct: 436 ISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETK 495
Query: 117 ------------------------------TDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ +AL F+ +Q G +VTY +LI GL
Sbjct: 496 LILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGL 555
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C+AG + A + G PN YT+++ N + ++ M+ +G T D
Sbjct: 556 CEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDI 615
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ +I +K G L+EA + +M ++ D+ Y +L++ + + G+L A +E
Sbjct: 616 TAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNE 675
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG----FDSNLEAYN 315
M ++G ++ L+ K G + A M ++ FD+ L AYN
Sbjct: 676 MIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMAYSFEFDAQL-AYN 727
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 82/205 (40%), Gaps = 35/205 (17%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ + RM G+ P+V Y SLI G N+ + + L DEM
Sbjct: 550 VLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCR 609
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD+ ++ +L+ + G EA + +R T+ A
Sbjct: 610 GMTPDITAFTALIDGNLKHGNLQEALVLI------------------------SRMTELA 645
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +L Y L+ G + G L AR E+ + G P + +++
Sbjct: 646 IEF-----------DLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLRE 694
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFD 205
++ + +E+ + M+R Y+F+
Sbjct: 695 YYKRGQLDEAIELKNEMERMAYSFE 719
>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
Length = 440
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 157/285 (55%), Gaps = 2/285 (0%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHC 75
+L RM E G +P V +YN L+ G S +L+LL M + G PPDV SY++++
Sbjct: 156 VLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDG 215
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
LF+ G D+A + +M+ + P T+N ++ LCK + D A+ + + K+G +P+
Sbjct: 216 LFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPD 275
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
+TYN ++ G C +G+ + A IL+++ G P+A+TYT++M +N + +IL
Sbjct: 276 CITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILD 335
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
+M ++G + Y T++ + G L E D ++ MV +G+Q D ++ LI K
Sbjct: 336 SMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQ 395
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++ A + +M +Q D T+ LIDGLCK+G + A L+LE
Sbjct: 396 NVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDAMLNLE 440
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 162/334 (48%), Gaps = 3/334 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL-LDEMLE 59
+LI C+ D G+ L + + G + + + L+ S ++++ L M E
Sbjct: 103 ILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRRMTE 162
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYT 117
+G P V+SYN L+ L + EA + M GD P +++ +++GL K +
Sbjct: 163 LGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDS 222
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
D A + + + G +P++VTYN ++ LCKA + A +L + +G P+ ITY +I
Sbjct: 223 DKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSI 282
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + + K + IL M G D Y +++ K GR EA ++ M+ G+
Sbjct: 283 VHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGL 342
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+ ++++Y+TL++ Y +G L LLD M + G + D++ +ILI K N+ A
Sbjct: 343 KPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMF 402
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
M + ++ Y ++D L K G++D A+
Sbjct: 403 VFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDAM 436
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 166/355 (46%), Gaps = 7/355 (1%)
Query: 14 AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 73
+G+ + R + ++P + TY LI R L L +++ G + + L+
Sbjct: 81 SGFNRMARSSDGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLL 140
Query: 74 HCLFQLGKPDEA-NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG- 131
L + A N V + M P ++NI+L GLC + AL + + G
Sbjct: 141 KSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGG 200
Query: 132 -FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
P++V+Y+ +I GL K G A E+ + G P+ +TY TI+ + +
Sbjct: 201 DCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKA 260
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+++L+ M + G D Y +++ + G+ KEA +E+M +DGV+ D V+Y +L++
Sbjct: 261 MDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDY 320
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
CK G+ A +LD M K+G + + T++ L+ G G + R L+ M + G +
Sbjct: 321 LCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPD 380
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 361
++ ++ K +D A+ VF M D TY +++ LCK+ R+ A
Sbjct: 381 RHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDA 435
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 115/260 (44%), Gaps = 8/260 (3%)
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC- 180
RM R P L TY ILI C+AGRL L + G+ I +T ++K
Sbjct: 85 RMARS-SDGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSL 143
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG--VQ 238
C R +L M G F Y ++ R +EA + + M DG
Sbjct: 144 CAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCP 203
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D+VSY+T+I+ KEG + AY EM ++G D T+ ++ LCKA + A
Sbjct: 204 PDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDV 263
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCK 354
L M K G + YN IV G+ AI + E M D+ TY+S++ LCK
Sbjct: 264 LNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCK 323
Query: 355 AKRLPSASKLLLSCLKSGVR 374
R A K+L S +K G++
Sbjct: 324 NGRCIEARKILDSMIKRGLK 343
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 7/243 (2%)
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
D P TY ++ CC R + LG L + +KGY + + ++ + R
Sbjct: 91 DGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTS 150
Query: 224 EATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHT 280
A + + + +T+ G + SYN L+ C E + + A LL M G +C D +++
Sbjct: 151 NAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYS 210
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 338
+IDGL K G+ A M + G ++ YN IV L K +D A++V M
Sbjct: 211 TIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKN 270
Query: 339 --VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ D TY+S+VH C + + A +L GV +++D L +G EA
Sbjct: 271 GVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEA 330
Query: 397 KKI 399
+KI
Sbjct: 331 RKI 333
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 7/202 (3%)
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY-LLLDEM 267
Y +I + GRL + ++ G +++ + + L+ C E + A ++L M
Sbjct: 101 YGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRRM 160
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD--SNLEAYNCIVDRLGKDG 325
+ G +++ IL+ GLC + A L M G D ++ +Y+ I+D L K+G
Sbjct: 161 TELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEG 220
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
D A + + M + D TY+++V LCKA+ + A +L +K+GV
Sbjct: 221 DSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYN 280
Query: 382 AVVDGLRHSGCRREAKKIQSKI 403
++V G SG +EA I K+
Sbjct: 281 SIVHGYCSSGQSKEAIGILEKM 302
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 174/367 (47%), Gaps = 4/367 (1%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
FD ++ +M G+ TYN LI G + + + DL EML G P V +YN
Sbjct: 257 EFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYN 316
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
++M+ L +LG+ +A R M+ DL P ++N ++ G + AL +F L+
Sbjct: 317 TIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSK 376
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
VP +VTYN LI G C+ G L A+ + ++ G P+ +T+T +++ + +
Sbjct: 377 NLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMA 436
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
E+ M +G D Y T I +K+G +A E+M +G D+++YN LIN
Sbjct: 437 KELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLING 496
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
CK G + A L+ +M +G D T+T +I +G ++ A M K G +
Sbjct: 497 LCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPS 556
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
+ Y ++ G++D A F+ M+ K + TY+++++ LCK + A L
Sbjct: 557 VVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFA 616
Query: 367 SCLKSGV 373
GV
Sbjct: 617 EMESKGV 623
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 146/283 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI Y + +F + + +R + P VVTYN+LI G R L + + D+M++ G
Sbjct: 353 LIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHG 412
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV ++ L+ Q+G A +F +M+ L P + + G K A
Sbjct: 413 LCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAF 472
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M ++ GF P+L+TYN+LI GLCK G A +++++ G P+ +TYT+I+
Sbjct: 473 GMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAH 532
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + E+ S M +KG Y +I ++ GRL A Y ++M GV ++
Sbjct: 533 LISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNV 592
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
++YN LI CKE ++ AY L EME +G +KYT+TILI+
Sbjct: 593 ITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILIN 635
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 166/351 (47%), Gaps = 4/351 (1%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
I P +VT+N+++ + + ++++LD M G P+ SYN L++ L G+ D A
Sbjct: 203 IRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAK 262
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ + M L T+N ++ G CK + A + R + G +P +VTYN ++ L
Sbjct: 263 ELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSL 322
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C+ GR+ AR L + + P+ ++Y T++ R + L + S ++ K
Sbjct: 323 CRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSV 382
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T+I + G L A + M+ G+ D+V++ L+ +C+ G L A L DE
Sbjct: 383 VTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDE 442
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M +G + D +T I G K GN A E M GF +L YN +++ L K G
Sbjct: 443 MLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGN 502
Query: 327 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
D A + + M V D TY+S++H + L A ++ LK G+
Sbjct: 503 FDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGI 553
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 178/405 (43%), Gaps = 4/405 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + + + + + +M G+ PDV N ++ S+++ ++ M++
Sbjct: 142 LLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKC 201
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P + ++N++M + G+ A V M P ++N+++NGL D A
Sbjct: 202 QIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRA 261
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G TYN LI+G CK A + +E+ G P +TY TIM
Sbjct: 262 KELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYS 321
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + L M + D Y T+I + ++G EA ++ + +
Sbjct: 322 LCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPS 381
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YNTLI+ C+ G L+ A + D+M K G D T TIL+ G C+ GN+ A+ +
Sbjct: 382 VVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFD 441
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G + AY + K G A + E M+ + D TY+ +++ LCK
Sbjct: 442 EMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLG 501
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
A++L+ G+ +++ SG R+A+++ S
Sbjct: 502 NFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFS 546
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 121/260 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +CQ + + + M G+ PD + Y + I G + S + + +EM
Sbjct: 422 ILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAE 481
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PPD+ +YN L++ L +LG D+AN + Q M + P T+ +++ + A
Sbjct: 482 GFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKA 541
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + K G P +VTY +LI GRL A+ E+ D G +PN ITY ++
Sbjct: 542 EEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYG 601
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + + M+ KG + + + Y +I + ++A + M+ ++ D
Sbjct: 602 LCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPD 661
Query: 241 IVSYNTLINLYCKEGKLEAA 260
+++ L+ K+ KL A
Sbjct: 662 SCTHSALMKHLSKDYKLLAV 681
>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 154/285 (54%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV+YN+L+ G R L L M
Sbjct: 147 ILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHAS 206
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN++F +M+ L P + TF +++G CKN + D A
Sbjct: 207 GVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVDLA 266
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + +P+LVTYN LI GLCK G L+ A ++ E+ G P+ ITYTT++
Sbjct: 267 MEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDG 326
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + E M ++ D Y +I+ + GR +A + +M++ G++ D
Sbjct: 327 CCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 386
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y +IN +CK+G + LL EM++ G T+ +L++G
Sbjct: 387 TRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 145/298 (48%), Gaps = 1/298 (0%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E+LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ + G P++ TY++LI GLCK ++ A + E+ + G PN++T+
Sbjct: 191 GDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTF 250
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N L +EI M + D Y +I K G LK+A D +++M
Sbjct: 251 TTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSM 310
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG L+ A+ M ++ D +T LI GLC+ G
Sbjct: 311 XGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVD 370
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
A L M +G + Y I++ K G + + + M+ +D S + +N+
Sbjct: 371 AEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQ-RDGHVPSVVTYNV 427
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 156/309 (50%), Gaps = 2/309 (0%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ + + + + D + + G+ P V SYN+
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNT 182
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M + P T+++++NGLCK D+A ++F + + G
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKG 242
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP VT+ LI G CK G + A I K++ P+ +TY ++ + K
Sbjct: 243 LVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAH 302
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+++ M G D Y T+I K G L A ++ + M+ + ++LD V+Y LI+
Sbjct: 303 DLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGL 362
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 310
C+EG+ A +L EM G + D T+T++I+ CK G++ KG++L L+ M + G +
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKL-LKEMQRDGHVPS 421
Query: 311 LEAYNCIVD 319
+ YN +++
Sbjct: 422 VVTYNVLMN 430
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 146/319 (45%), Gaps = 14/319 (4%)
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVF----QDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
D++ ++ L+ +LG +A + + C C +L L K +Y
Sbjct: 71 DIYVFSGLITAYLELGFLRDAIDCYRLTREHKFCVPFDTCRK----VLEHLMKLKYFKLV 126
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + G+ L +NIL+ CK G +R A+ + + G P+ ++Y T+M
Sbjct: 127 WGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNG 186
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R G + SAM G D + Y +I K ++ +A ++M+ G+ +
Sbjct: 187 YIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPN 246
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V++ TLI+ +CK G ++ A + +M Q D T+ LI GLCK G++K A ++
Sbjct: 247 SVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLID 306
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN-----VFESMEVKDSFTYSSMVHNLCKA 355
M+ G + Y ++D K+G +D A + E++ + D Y++++ LC+
Sbjct: 307 EMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRL-DDVAYTALISGLCQE 365
Query: 356 KRLPSASKLLLSCLKSGVR 374
R A K+L L G++
Sbjct: 366 GRSVDAEKMLREMLSVGLK 384
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 167/342 (48%), Gaps = 4/342 (1%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
+P +N +++ + S +L L +M GI D +++N L++C QLG +
Sbjct: 58 TPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFS 117
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
+F ++ P TFN ++ GLC + AL + GF + V+Y LI GLC
Sbjct: 118 IFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLC 177
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K GR+ A +LK + PNA+ Y I+ + + ++ S M K D F
Sbjct: 178 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVF 237
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y +I+ F + +L A D +M + + ++ ++N L++ +CKEGK+ A ++L M
Sbjct: 238 TYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIM 297
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
K + D T+ L+DG C + A+ + M G +N++ Y +V+ K +
Sbjct: 298 MKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMV 357
Query: 328 DHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
D AIN+FE M + + TYSS++ LCK R+ A KL+
Sbjct: 358 DEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLV 399
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 150/285 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + + + N+M++ I+P+V T+N L+ G + ++ + +L M++
Sbjct: 242 LISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDD 301
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV +YNSLM + K ++A +F M G + + M+NG CK + D A+
Sbjct: 302 IKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAI 361
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ +P +VTY+ LI GLCK GR+ A ++ E+ D G PN +TY++I+
Sbjct: 362 NLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDAL 421
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N + +L+ +K +G D + Y +I + GRL++A + E ++ G LD+
Sbjct: 422 CKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDV 481
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+Y +I +C +G + A LL +ME G + T+ ++I L
Sbjct: 482 YAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSL 526
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 195/408 (47%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ + Q ++I ++ + G P +T+N+LI G + +L D+++
Sbjct: 101 ILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQ 160
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D SY +L++ L ++G+ A ++ + + + P +N++++ +CK + ++A
Sbjct: 161 GFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDA 220
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + P++ TYN LI G +L A + ++ PN T+ ++
Sbjct: 221 FDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDG 280
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K +L+ M + D Y +++ + I ++ +A D + M + GV +
Sbjct: 281 FCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIAN 340
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ Y T++N +CK ++ A L +EM + + T++ LIDGLCK G I A ++
Sbjct: 341 VQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVD 400
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M+ G N+ Y+ I+D L K+ +D AI + +++ + D +TY+ ++ LC++
Sbjct: 401 EMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSG 460
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
RL A + L G + A ++ G G +A + SK+
Sbjct: 461 RLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKME 508
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 177/383 (46%), Gaps = 4/383 (1%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
+M GI D T+N LI ++ L S S + ++L+ G P ++N+L+ L G
Sbjct: 86 QMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKG 145
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
+A ++ ++ ++NGLCK AL++ + + P V YN
Sbjct: 146 HIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYN 205
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
++I +CKA + A + ++ P+ TY ++ K +++ + MK++
Sbjct: 206 MIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKE 265
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
+ + + ++ F K G++ +A + M+ D ++ D+V+YN+L++ YC K+ A
Sbjct: 266 NINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKA 325
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
+ D M G + +T +++G CK + A E M N+ Y+ ++D
Sbjct: 326 KDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDG 385
Query: 321 LGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
L K G+I +A+ + + M + + TYSS++ LCK + A LL + G+R
Sbjct: 386 LCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPD 445
Query: 377 KSAQKAVVDGLRHSGCRREAKKI 399
++ GL SG +A+ +
Sbjct: 446 MYTYTILIKGLCQSGRLEDAQNV 468
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 135/271 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D +C+ + +L M + I PDVVTYNSL+ G + ++ + D+ D M
Sbjct: 276 ILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASG 335
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ +V Y ++++ ++ DEA +F++M C + P T++ +++GLCK A
Sbjct: 336 GVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYA 395
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L++ + G P +VTY+ ++ LCK + A +L L D G P+ TYT ++K
Sbjct: 396 LKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKG 455
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ + + + + KGY D + Y +I F G +A + +M +G +
Sbjct: 456 LCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPN 515
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+Y +I ++ + + A LL EM +G
Sbjct: 516 AKTYELVILSLFEKDENDTAEKLLREMIVRG 546
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 119/236 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D YC + I + M G+ +V Y +++ G + ++ +++L +EM
Sbjct: 312 LMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRK 371
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V +Y+SL+ L +LG+ A ++ +M P T++ +L+ LCKN + D A+
Sbjct: 372 IIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAI 431
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L+ G P++ TY ILIKGLC++GRL A+ + ++L G+ + YT +++
Sbjct: 432 ALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGF 491
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ L +LS M+ G + Y VI + + A + +M+ G+
Sbjct: 492 CDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 191/403 (47%), Gaps = 5/403 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID++C+ D L++M +A I V YNSLI G + S + DEM++
Sbjct: 232 ILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDK 291
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P V +Y SL+ G+ +A +V+ +M ++P T TF +++GLC+ A
Sbjct: 292 GLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEA 351
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+R+F +++ +P VTYN++I+G C++G + A +L E+ G P+ TY ++
Sbjct: 352 IRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISG 411
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ E + + + + + Y ++ + K GR K+A MV GV +D
Sbjct: 412 LCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMD 471
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V Y LI+ +E A + LL EM G D +T +ID KAGN+K A +
Sbjct: 472 LVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWD 531
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAK 356
M G N+ Y +++ L K G +D A + + V D TY + +L +
Sbjct: 532 IMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGG 591
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ A +L + LK G + ++ G G EA K+
Sbjct: 592 NMEKAVQLHHAMLK-GFLATTVSYNILIRGFCRLGKIEEATKL 633
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 181/380 (47%), Gaps = 15/380 (3%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M++ + P+V T ++L+ G R + L L D+++ + PD++ Y++++ L +L
Sbjct: 87 MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
++A + M +N++++GLCK+R AL + L + G +VTY
Sbjct: 147 FNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY-- 204
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
G+ A + KE+G+ G N ITY+ ++ R + + L M +
Sbjct: 205 -------YGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKAS 257
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
F + Y ++I + K+G A Y ++M+ G+ +V+Y +LI+ YC EG+ A+
Sbjct: 258 IEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAF 317
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDR 320
+ +EM +G + YT T +I GLC+A + A RL E + S + YN +++
Sbjct: 318 KVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEV-TYNVMIEG 376
Query: 321 LGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
+ G I A ++ + M V D++TY ++ LC R+ A + + K ++
Sbjct: 377 HCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLN 436
Query: 377 KSAQKAVVDGLRHSGCRREA 396
A+V G G ++A
Sbjct: 437 NMCYSALVHGYCKEGRFKDA 456
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 183/446 (41%), Gaps = 73/446 (16%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC+ + A + M + G++P VVTY SLI+G + + +EM G
Sbjct: 268 LINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKG 327
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+ +++ +++ L + EA R+F +M + P T+N+M+ G C++ A
Sbjct: 328 ISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAF 387
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + GFVP+ TY LI GLC GR+ A+ + +L H N + Y+ ++
Sbjct: 388 HLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGY 447
Query: 182 FRNRKYKLGLE-----------------------------------ILSAMKRKGYTFDG 206
+ ++K + +L M G D
Sbjct: 448 CKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDA 507
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I K G LKEA + MV +G ++V+Y LIN CK G ++ A LL E
Sbjct: 508 VIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKE 567
Query: 267 -------------------------MEK---------QGFECDKYTHTILIDGLCKAGNI 292
MEK +GF ++ ILI G C+ G I
Sbjct: 568 TLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKI 627
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 348
+ A L M + Y+ I+ K + AI ++ +M K D+ YS +
Sbjct: 628 EEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFL 687
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVR 374
VH C A L A +L ++ G+R
Sbjct: 688 VHGCCIAGELEKAFELRDEMIRRGMR 713
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 158/331 (47%), Gaps = 9/331 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ + C+ F+ +++ M +V YN LI G ++ + +L++ + +++ G
Sbjct: 137 VVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKG 196
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ +V +Y GK +EA +F++M L T++I+++ C+ DNA+
Sbjct: 197 LEANVVTY---------YGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAI 247
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ K + YN LI G CK G A++ E+ D G P +TYT+++
Sbjct: 248 GFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGY 307
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ ++ + M KG + + + + +I+ + + EA +M +
Sbjct: 308 CNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSE 367
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN +I +C+ G + A+ LLDEM +GF D YT+ LI GLC G + A+ ++
Sbjct: 368 VTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDD 427
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
++K N Y+ +V K+G+ A++
Sbjct: 428 LHKDHHKLNNMCYSALVHGYCKEGRFKDAVS 458
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 134/309 (43%), Gaps = 36/309 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ YC+ F + M E G++ D+V Y LI G R LL EM G
Sbjct: 443 LVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHG 502
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD Y +++ D ++ G+L ++IM++ C
Sbjct: 503 LRPDAVIYTNMI---------DRHSKA------GNLKEAFGLWDIMVDEGC--------- 538
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+P +VTY LI GLCKAG + A + KE S PN ITY +
Sbjct: 539 -----------LPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHL 587
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + +++ AM KG+ Y +I F ++G+++EAT + M + + D
Sbjct: 588 TRGGNMEKAVQLHHAM-LKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDY 646
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y+T+I CK L+ A L M +G + D ++ L+ G C AG ++ A +
Sbjct: 647 ITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDE 706
Query: 302 MNKIGFDSN 310
M + G SN
Sbjct: 707 MIRRGMRSN 715
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 132/278 (47%), Gaps = 36/278 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID + A + +L M G+ PD V Y ++I ++ L + L D M++
Sbjct: 477 ILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDE 536
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V +Y +L++ L + G D+A + ++ + D+TP T+ L+ L + + A
Sbjct: 537 GCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKA 596
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + K GF+ V+YNILI+G C+ G++ A +L + D+ P+ ITY+TI
Sbjct: 597 VQLHHAMLK-GFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTI--- 652
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
I KR L+EA M+ G++ D
Sbjct: 653 ------------IYEQCKRSN--------------------LQEAIKLWHTMLDKGLKPD 680
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
++Y+ L++ C G+LE A+ L DEM ++G + T
Sbjct: 681 TLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 120/302 (39%), Gaps = 45/302 (14%)
Query: 113 KNRYTDNALRMF-----RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 167
K + D L M R ++ +PE+ T + L+ GL + R + ++ +
Sbjct: 68 KPSHVDKVLMMLSLNDSRLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANV 127
Query: 168 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
P+ Y+ +++ + + E++ M+ Y +I K R+ EA +
Sbjct: 128 QPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALE 187
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
++ G++ ++V+Y GK A LL EM ++G + T++ILID C
Sbjct: 188 IKNCLMQKGLEANVVTY---------YGKFNEAELLFKEMGEKGLCANHITYSILIDSFC 238
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS 347
+ G E N IGF +D++ K I+ + + Y+S
Sbjct: 239 RRG---------EMDNAIGF----------LDKMTK-ASIEFTV-----------YPYNS 267
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
+++ CK +A + G+ +++ G + G +A K+ +++
Sbjct: 268 LINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKG 327
Query: 408 IS 409
IS
Sbjct: 328 IS 329
>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
filifolia]
Length = 431
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 153/285 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV+YN+L+ G R L L ML
Sbjct: 147 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 206
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN++F +M+ L P TF +++G CKN D A
Sbjct: 207 GVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDLA 266
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + +P+L+TYN LI GLCK G L+ A ++ E+ G P+ ITYTT++
Sbjct: 267 MEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDG 326
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + E M ++ D Y +I+ + GR +A + +M++ G++ D
Sbjct: 327 CCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 386
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y +IN +CK+G + LL EM++ G T+ +L++G
Sbjct: 387 ARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 160/309 (51%), Gaps = 2/309 (0%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ ++ + + + D + + G+ P V SYN+
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 182
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M+ + P T+++++NGLCK D+A ++F +
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKA 242
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP VT+ LI G CK GR+ A I K++ P+ ITY T++ + K
Sbjct: 243 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAN 302
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+++ M KG D Y T+I K G L A ++ ++M+ + ++LD V+Y LI+
Sbjct: 303 DLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGL 362
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 310
C+EG+ A +L EM G + D T+T++I+ CK G++ KG++L L+ M + G +
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKL-LKEMQRDGHVPS 421
Query: 311 LEAYNCIVD 319
+ YN +++
Sbjct: 422 VVTYNVLMN 430
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 144/298 (48%), Gaps = 1/298 (0%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E+LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ + G P++ TY++LI GLCK ++ A + E+ PN +T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTF 250
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + D Y T+I K G LK+A D +++M
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSM 310
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G+Q D ++Y TLI+ CKEG L+ A+ M ++ D +T LI GLC+ G
Sbjct: 311 KGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 370
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
A L M +G + Y I++ K G + + + M+ +D S + +N+
Sbjct: 371 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ-RDGHVPSVVTYNV 427
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 128/272 (47%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y + + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 172
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ ++Y T+M R G + SAM G D + Y +I K ++ +A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDAN 232
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
++M+ + + V++ TLI+ +CK G+++ A + +M Q D T+ LI GL
Sbjct: 233 KLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K A ++ M+ G + Y ++D K+G +D A + M + D
Sbjct: 293 CKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 352
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 189/407 (46%), Gaps = 12/407 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ + D Y + M + GI PDVVTY ++I G + L + + +M++
Sbjct: 204 IVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDN 263
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ ++YN L+H +GK E ++ ++M L P T+ +LN LCKN A
Sbjct: 264 GFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREA 323
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA----ITYTT 176
F + + G P++ TY ILI G G L L + ++G +P+ I ++
Sbjct: 324 RFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSA 383
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
KC ++ ++I + M++ G + + Y +I A K+GR+ +A QM+ +G
Sbjct: 384 YAKCGMIDK----AMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEG 439
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
V +IV +N+L+ C K E A L+ EM QG + LI LC G + R
Sbjct: 440 VTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGR 499
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNL 352
++ M +G + +Y ++ G+ D A VF+ M TY++++H
Sbjct: 500 RLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGY 559
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
C A R+ A L L+ GV ++ GL + EAK++
Sbjct: 560 CSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKEL 606
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 183/390 (46%), Gaps = 7/390 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE---MGIPPDVWSYNSLM 73
+L RM E G PD V+Y L+ G +L+LL M + PP+V SY+ ++
Sbjct: 147 VLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVI 206
Query: 74 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 133
+ F G+ D+ +F +MI + P T+ +++GLCK + D A +F+ + +GF
Sbjct: 207 NGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFK 266
Query: 134 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 193
P TYN LI G G+ + +L+E+ G P+ TY +++ +N + +
Sbjct: 267 PNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFF 326
Query: 194 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 253
+M RKG Y +I + G L E +++ MV +G+ D +N + Y K
Sbjct: 327 FDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAK 386
Query: 254 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
G ++ A + ++M + G + + LID LCK G + A + M G N+
Sbjct: 387 CGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVV 446
Query: 314 YNCIVDRLGKDGKIDHAIN-VFESME---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 369
+N +V L K + A V+E ++ ++ +++++ NLC R+ +L+
Sbjct: 447 FNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLME 506
Query: 370 KSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
GVR + ++ G +G EA+K+
Sbjct: 507 HVGVRPDAFSYTPLISGYCLTGRTDEAEKV 536
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 186/407 (45%), Gaps = 4/407 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI Y + ++ L+ M E G+SPD +N + + ++ ++D+ ++M +
Sbjct: 344 ILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQH 403
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V +Y +L+ L +LG+ D+A F MI +TP FN ++ GLC + A
Sbjct: 404 GLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERA 463
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P V +N LI LC GR+ R ++ + G P+A +YT ++
Sbjct: 464 EELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISG 523
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ M G + Y T++ + R+ +A +M+ GV
Sbjct: 524 YCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPG 583
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YNT+++ + + A L M G +CD YT+ I+++GLCK+ + A +
Sbjct: 584 VVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQ 643
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ G N+ + ++ L K G+ + A+++F ++ V + TY + NL +
Sbjct: 644 SLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEG 703
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L L + K+G A+V L H G A SK+
Sbjct: 704 SLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKL 750
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 176/406 (43%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI Y + +L M G+ PD TY SL+ +N + D M+ G
Sbjct: 275 LIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKG 334
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P V +Y L+H G E + M+ L+P FNI + K D A+
Sbjct: 335 IKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAM 394
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++HG P +V Y LI LCK GR+ A ++ + G PN + + +++
Sbjct: 395 DIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGL 454
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K++ E++ M +G + + T+I +GR+ E ++ M GV+ D
Sbjct: 455 CTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDA 514
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
SY LI+ YC G+ + A + D M G + T+ L+ G C A I A
Sbjct: 515 FSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFRE 574
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHNLCKAKR 357
M + G + YN I+ L + + A +N+ S D +TY+ +++ LCK+
Sbjct: 575 MLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNC 634
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ A K+ S G+++ ++ L G + +A + + I
Sbjct: 635 VDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAI 680
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 166/383 (43%), Gaps = 35/383 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG--------------------- 40
LIDA C+ D N+M G++P++V +NSL+ G
Sbjct: 415 LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQG 474
Query: 41 ----ATRNSLLSCSL----------DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
A + L C+L L+D M +G+ PD +SY L+ G+ DEA
Sbjct: 475 ICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAE 534
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+VF M+ L+P T+N +L+G C D+A +FR + + G P +VTYN ++ GL
Sbjct: 535 KVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGL 594
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
+ R A+ + + +SG + TY I+ ++ ++ ++ KG +
Sbjct: 595 FQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNI 654
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ +I A +K GR ++A D + +G+ ++V+Y + +EG LE L
Sbjct: 655 ITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSA 714
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
MEK G + L+ L G+I A +L +++ F + ++ D
Sbjct: 715 MEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIFTSDEY 774
Query: 327 IDHAINVFESMEVKDSFTYSSMV 349
HA ++ E + S+++
Sbjct: 775 QHHAKSLPEKYHFLNEANSSALI 797
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 167/387 (43%), Gaps = 46/387 (11%)
Query: 23 REAGISPD-VVTYNSLIAGATRNSLLSC--SLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 79
R G +P + +IA R+ L +L L DE+L P V ++N L+ + +
Sbjct: 3 RRVGAAPARCLELERIIAERARSRSLGLDDALKLFDELLHHARPASVRAFNHLLTAVSRA 62
Query: 80 ---GKPDEANRVFQDMI--CGD-LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 133
+ A F M+ C D + P T++I++ C+ + ++ F + K G+
Sbjct: 63 RCSSASELAVSHFNRMVRECSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWR 122
Query: 134 PELVTYNILIKGLCKAGRLRTAR-WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+ + N L+KGLC R+ A +L+ + + G P+ ++YT ++K ++ + LE
Sbjct: 123 MDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALE 182
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+L M A D+ + ++VSY+ +IN +
Sbjct: 183 LLHMM---------------------------ADDHGRR-----CPPNVVSYSIVINGFF 210
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
EG+++ Y L EM +G D T+T +IDGLCKA A + M GF N
Sbjct: 211 TEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNY 270
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 368
YNC++ GK + + E M + D +TY S+++ LCK R A S
Sbjct: 271 TYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSM 330
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRRE 395
++ G++ S ++ G G E
Sbjct: 331 IRKGIKPKVSTYGILIHGYATKGALSE 357
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 164/308 (53%), Gaps = 2/308 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M+I +C+ + + M G PDVVTYN+L+ G + L + LL+EM E
Sbjct: 21 MVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER 80
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+PPD+ ++ +L+H GK D+A ++F M+ L P T+N +++G+C+ D A
Sbjct: 81 GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKA 140
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + P VTY+ILI C+ G++ A L E+ + G PN +TY +I+K
Sbjct: 141 NDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKG 200
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R+ G + L M + D Y T+I ++K ++ +A + M + VQ D
Sbjct: 201 YCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPD 260
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
+V+YN LIN + G ++ A + ++M +G E D+YT+ +I+G AGN K A +LH
Sbjct: 261 VVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHD 320
Query: 300 EYMNKIGF 307
E + + GF
Sbjct: 321 EMLQR-GF 327
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 161/319 (50%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
L MR G+ PD V Y +I G R L+S +L + DEM+ G PDV +YN+L++ L +
Sbjct: 4 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
+ +A + +M + P TF +++G C D AL++F + P++VT
Sbjct: 64 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
YN LI G+C+ G L A + ++ PN +TY+ ++ + + L M
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
KG + Y ++I + + G + + ++++M+ + V D+++YNTLI+ Y KE K+
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 243
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A+ LL+ MEK+ + D T+ +LI+G GN++ A E M G + + Y ++
Sbjct: 244 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 303
Query: 319 DRLGKDGKIDHAINVFESM 337
+ G A + + M
Sbjct: 304 NGHVTAGNSKEAFQLHDEM 322
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 145/274 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ +LN MRE G+ PD+ T+ +LI G L +L L D ML
Sbjct: 57 LLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 116
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ +YN+L+ + + G D+AN ++ DM ++ P T++I+++ C+ ++A
Sbjct: 117 LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAF 176
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ G +P ++TYN +IKG C++G + + L+++ + +P+ ITY T++
Sbjct: 177 GFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGY 236
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K ++L+ M+++ D Y +I F G ++EA E+M G++ D
Sbjct: 237 IKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDR 296
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
+Y ++IN + G + A+ L DEM ++GF D
Sbjct: 297 YTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 154/319 (48%), Gaps = 4/319 (1%)
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
++M C L P + +++ G C+ +ALR+ + G +P++VTYN L+ GLCK
Sbjct: 4 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
RL A +L E+ + G P+ T+TT++ K L++ M + D
Sbjct: 64 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y T+I + G L +A D + M + + + V+Y+ LI+ +C++G++E A+ LDEM
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
+G + T+ +I G C++GN+ + L+ M +L YN ++ K+ K+
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 243
Query: 329 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 384
A + ME + D TY+ +++ + A + G+ + +++
Sbjct: 244 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 303
Query: 385 DGLRHSGCRREAKKIQSKI 403
+G +G +EA ++ ++
Sbjct: 304 NGHVTAGNSKEAFQLHDEM 322
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 4/220 (1%)
Query: 194 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 253
L M+ G DG Y VI F + G + +A ++MV G D+V+YNTL+N CK
Sbjct: 4 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63
Query: 254 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
E +L A LL+EM ++G D T T LI G C G + A + M ++
Sbjct: 64 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123
Query: 314 YNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCL 369
YN ++D + + G +D A ++++ M ++ F TYS ++ + C+ ++ A L +
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183
Query: 370 KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
G+ +++ G SG + +K K+ + K+S
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVS 223
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 86/170 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID++C+ + + L+ M GI P+++TYNS+I G R+ +S L +M+
Sbjct: 161 ILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVN 220
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+ +YN+L+H + K +A ++ M + P T+N+++NG + A
Sbjct: 221 KVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEA 280
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
+F + G P+ TY +I G AG + A + E+ G AP+
Sbjct: 281 GWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 4/141 (2%)
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
Y+ +M G+ D V Y +I +C+ G + A + DEM G D T+ L++GLC
Sbjct: 3 YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLC 62
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 343
K + A L M + G +L + ++ +GK+D A+ +F++M + D
Sbjct: 63 KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 122
Query: 344 TYSSMVHNLCKAKRLPSASKL 364
TY++++ +C+ L A+ L
Sbjct: 123 TYNTLIDGMCRQGDLDKANDL 143
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 192/371 (51%), Gaps = 10/371 (2%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
S D Y + M I P+V T+N +I + ++ + D++++M G P+V SYN
Sbjct: 204 SADVEY-VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYN 262
Query: 71 SLMHCLFQLG---KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+L+ +LG K +A+ V ++M+ D++P TFNI+++G K+ ++++F+ +
Sbjct: 263 TLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM 322
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
P +++YN LI GLC G++ A + ++ +G PN ITY ++ +N
Sbjct: 323 LDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDML 382
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
K L++ ++K +G Y +I A+ K+G++ + E+M +G+ D+ +YN L
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
I C+ G +EAA L D++ +G D T IL++G C+ G + A + L+ M+K+G
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL 501
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSAS 362
YN ++ K+G + A N+ ME + +Y+ ++ + +L A+
Sbjct: 502 KPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDAN 561
Query: 363 KLLLSCLKSGV 373
LL L+ G+
Sbjct: 562 MLLNEMLEKGL 572
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 171/336 (50%), Gaps = 9/336 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATR---NSLLSCSLDLLDEM 57
++I+A C+ + ++ M+ G SP+VV+YN+LI G + N + + +L EM
Sbjct: 228 VVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEM 287
Query: 58 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
+E + P++ ++N L+ ++ + +VF++M+ D+ P ++N ++NGLC
Sbjct: 288 VENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKI 347
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
A+ M + G P L+TYN LI G CK L+ A + + G P Y +
Sbjct: 348 SEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNML 407
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + K G + M+R+G D Y +IA + G ++ A +Q+ + G+
Sbjct: 408 IDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-- 295
D+V+++ L+ YC++G+ A +LL EM K G + T+ I++ G CK GN+K A
Sbjct: 468 P-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATN 526
Query: 296 -RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
R +E ++ N+ +YN ++ + GK++ A
Sbjct: 527 MRTQMEKERRLRM--NVASYNVLLQGYSQKGKLEDA 560
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 161/337 (47%), Gaps = 40/337 (11%)
Query: 2 LIDAYCQFVSFDAGY---TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
LID YC+ Y +L M E +SP++ T+N LI G ++ L S+ + EML
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 323
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
+ + P+V SYNSL++ L GK EA + M+ + P T+N ++NG CKN
Sbjct: 324 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 383
Query: 119 NALRMF-----------------------------------RGLQKHGFVPELVTYNILI 143
AL MF +++ G VP++ TYN LI
Sbjct: 384 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
GLC+ G + A+ + +L G P+ +T+ +M+ R + + +L M + G
Sbjct: 444 AGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYL 262
Y V+ + K G LK AT+ QM + +++++ SYN L+ Y ++GKLE A +
Sbjct: 503 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 562
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
LL+EM ++G ++ T+ I+ + + G + HL
Sbjct: 563 LLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHL 599
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 176/386 (45%), Gaps = 11/386 (2%)
Query: 30 DVVTYNSLIA-----GATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 84
D V NS+IA NS + G S LM L + + +
Sbjct: 147 DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSAD 206
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
V+++MI + P TFN+++N LCK + A + ++ +G P +V+YN LI
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLID 266
Query: 145 GLCK---AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
G CK G++ A +LKE+ ++ +PN T+ ++ +++ +++ M +
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD 326
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ Y ++I G++ EA ++MV+ GVQ ++++YN LIN +CK L+ A
Sbjct: 327 VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEAL 386
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+ ++ QG + +LID CK G I E M + G ++ YNC++ L
Sbjct: 387 DMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL 446
Query: 322 GKDGKIDHAINVFESMEVK---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
++G I+ A +F+ + K D T+ ++ C+ A+ LL K G++
Sbjct: 447 CRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHL 506
Query: 379 AQKAVVDGLRHSGCRREAKKIQSKIR 404
V+ G G + A +++++
Sbjct: 507 TYNIVMKGYCKEGNLKAATNMRTQME 532
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 161/367 (43%), Gaps = 9/367 (2%)
Query: 42 TRNSLLSCSLDLLDEMLEMGIPPDVWS-YNSLMHCLFQLGKPDEANRVFQDM-ICGDLTP 99
+NS +S SL+L ++L +S S + + G + + +F + +C ++
Sbjct: 92 VKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCV 151
Query: 100 CTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL 159
+ ++++ N + F+ +G+ ++ L+ L K R ++
Sbjct: 152 NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVY 211
Query: 160 KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 219
KE+ PN T+ ++ + K +++ MK G + + Y T+I + K+
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271
Query: 220 ---GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
G++ +A +++MV + V ++ ++N LI+ + K+ L + + EM Q + +
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNV 331
Query: 277 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
++ LI+GLC G I A + M G NL YN +++ K+ + A+++F S
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS 391
Query: 337 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 392
++ V + Y+ ++ CK ++ L + G+ ++ GL +G
Sbjct: 392 VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN 451
Query: 393 RREAKKI 399
AKK+
Sbjct: 452 IEAAKKL 458
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 7/180 (3%)
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G +L +S L+ KE + + EM ++ + + +T ++I+ LCK G + A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVD---RLGKDGKIDHAINVFESMEVKDS----FTYSSM 348
R +E M G N+ +YN ++D +LG +GK+ A V + M D T++ +
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+ K LP + K+ L V+ + ++++GL + G EA ++ K+ A +
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362
>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rotundifolia]
Length = 425
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 151/285 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV+YN+L+ G R L L ML
Sbjct: 141 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 200
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN +F +M+ L P TF +++G CKN D A
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 260
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + P+L+TYN LI GLCK G L+ A ++ E+ G P+ TYTT++
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDG 320
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + E M ++ D Y +I+ + GR +A + +M++ G++ D
Sbjct: 321 CCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 380
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
I +Y +IN +CK+G + LL EM++ G T+ +L++G
Sbjct: 381 IGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 425
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 159/297 (53%), Gaps = 2/297 (0%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ ++ + + + D + + G+ P V SYN+LM+ +LG D
Sbjct: 129 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M+ + P T+++++NGLCK D+A +F + G VP VT+ LI
Sbjct: 189 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I K++ +P+ ITY T++ + K +++ M KG
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D F Y T+I K G L A ++ ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVD 319
L EM G + D T+T++I+ CK G++ KG++L L+ M + G ++ YN +++
Sbjct: 369 LREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKL-LKEMQRNGHAPSVVTYNVLMN 424
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 139/284 (48%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+++LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 125 EDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ + G P++ TY++LI GLCK ++ A + E+ G PN +T+
Sbjct: 185 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A D +++M
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D +Y TLI+ CKEG L+ A+ M ++ D +T LI GLC+ G
Sbjct: 305 KGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G ++ Y I++ K G + + + M+
Sbjct: 365 AEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQ 408
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 141/273 (51%), Gaps = 4/273 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
FNI+++ CK+ A +F + K G P +V+YN L+ G + G L + +
Sbjct: 139 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 198
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
SG P+ TY+ ++ + K E+ M KG +G + T+I K GR+
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A + +QM++ + D+++YNTLI CK+G L+ A+ L+DEM +G + DK+T+T LI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 318
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK-IDHAINVFESMEV--- 339
DG CK G++ A H + M + + AY ++ L ++G+ +D + E + V
Sbjct: 319 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Query: 340 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
D TY+ +++ CK + SKLL ++G
Sbjct: 379 PDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNG 411
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 130/272 (47%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y + + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 107 VLEHLMKLKYFKLVWGFYEDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 166
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ ++Y T+M R G + SAM G D + Y +I K ++ +A
Sbjct: 167 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ + V++ TLI+ +CK G+++ A + +M Q D T+ LI GL
Sbjct: 227 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K A ++ M+ G + Y ++D K+G +D A + M + D
Sbjct: 287 CKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 346
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 347 VAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 191/390 (48%), Gaps = 6/390 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMH 74
+ +RM E G PD ++Y++++ + +LD+L ++ G P +V Y++++H
Sbjct: 160 VLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVH 219
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
LF+ GK EA +F +M + P T+N +++ LCK R D A + R + +G P
Sbjct: 220 GLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQP 279
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
+ VTYN LI G G+ + A + KE+ G PN +T +T + ++ + + E
Sbjct: 280 DNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFF 339
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
+M KG+ + Y T++ + G L + ++ MV DG+ + +N L+N Y K
Sbjct: 340 DSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKC 399
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
G + A + ++M+K+G D T+ +I C+ G++ A +M G + N Y
Sbjct: 400 GMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVY 459
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
C++ G + A + + K +++S++++LCK R+ A ++ ++
Sbjct: 460 QCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIR 519
Query: 371 SGVRILKSAQKAVVDGLRHSGCRREAKKIQ 400
+G + + +++DG G EA ++
Sbjct: 520 TGEKADVNIFTSLIDGYCLIGKMSEAFRVH 549
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 180/386 (46%), Gaps = 4/386 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + M + G+ P+VVTYNS+I + + + +L +M+ G+ PD +YN+L+H
Sbjct: 233 LFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYS 292
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
LG+ +A R+F++M + P T T + + LCK+ + A F + G ++
Sbjct: 293 TLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNII 352
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
+Y+ L+ G AG L + + G PN + ++ + + + I M
Sbjct: 353 SYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDM 412
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+++G D Y VI AF ++G + +A D M+ GV+ + Y LI +C G L
Sbjct: 413 QKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDL 472
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A L+ E+ +G + LI+ LCK G + A+ + + + G +++ + +
Sbjct: 473 VKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSL 532
Query: 318 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+D GK+ A V ++M D TY ++V+ CK R+ L L GV
Sbjct: 533 IDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGV 592
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKI 399
+ ++DGL H+G AK++
Sbjct: 593 KPTTFTYGIILDGLFHAGRTAAAKEM 618
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 196/413 (47%), Gaps = 11/413 (2%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG-ATRNSLLSCSLDLLDEMLEMGIPPD 65
C+ + + M G ++++Y++L+ G AT L+ S +L + M+ GI P+
Sbjct: 327 CKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMS-NLFNLMVRDGIVPN 385
Query: 66 VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 125
+N L++ + G EA +F+DM L P T+ +++ C+ D+A+ F
Sbjct: 386 QHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFN 445
Query: 126 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRN 184
+ G P Y LI+G C G L A ++ E+ + G P +++ +++ C
Sbjct: 446 HMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEG 505
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
R ++ I + R G D + ++I + IG++ EA + MV+ G++ DIV+Y
Sbjct: 506 RVFE-AQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTY 564
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
TL+N CK G+++ +L E+ +G + +T+ I++DGL AG A+ + M +
Sbjct: 565 GTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIE 624
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFE---SMEVK-DSFTYSSMVHNLCKAKRLPS 360
G + Y+ ++ L ++ + AI VF+ +M VK D + M+ + KA+R
Sbjct: 625 SGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREE 684
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS---KIRMAKISH 410
A L S G+ +++ L G EA+ + S K ++ SH
Sbjct: 685 AEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSH 737
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 123/255 (48%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC + + + M GI PD+VTY +L+ G +N + L L E+L G
Sbjct: 532 LIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKG 591
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P ++Y ++ LF G+ A +FQ+MI + T++I+L GLC+N T+ A+
Sbjct: 592 VKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAI 651
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ L ++V NI+I + KA R A + + D G P TYT +M+
Sbjct: 652 TVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENL 711
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + S M + G + ++ ++ G + +A YM ++ + +
Sbjct: 712 IKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEA 771
Query: 242 VSYNTLINLYCKEGK 256
+ + L++L+ +GK
Sbjct: 772 STASMLLSLFSCKGK 786
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 146/308 (47%), Gaps = 7/308 (2%)
Query: 99 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 158
P T++I+++ C+ R D A F L + G +++ + L++GLC A R A +
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160
Query: 159 L-KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY--TFDGFGYCTVIAA 215
L + + G P+AI+Y+T++K + + + L+IL ++G + Y TV+
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220
Query: 216 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
K G++ EA D +M GV ++V+YN++I+ CK ++ A +L +M G + D
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280
Query: 276 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
T+ LI G G K A + M G N + V L K G+I+ A F+
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFD 340
Query: 336 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
SM K + +YS+++H A L S L ++ G+ + +V+G G
Sbjct: 341 SMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCG 400
Query: 392 CRREAKKI 399
REA I
Sbjct: 401 MVREAMFI 408
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 141/329 (42%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I A+C+ S D N M + G+ P+ Y LI G + L + +L+ E+ G
Sbjct: 427 VIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKG 486
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P + S+ SL++ L + G+ EA R+F +I F +++G C A
Sbjct: 487 LGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAF 546
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + G P++VTY L+ G CK GR+ + +EL G P TY I+
Sbjct: 547 RVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGL 606
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F + E+ M G Y ++ + +EA +++ V+ DI
Sbjct: 607 FHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDI 666
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V N +I+ K + E A L + G T+TI+++ L K G+++ A
Sbjct: 667 VILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSV 726
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
M K G N IV L + G+I A
Sbjct: 727 MLKSGLSPTSHFINVIVRTLLEKGEIVKA 755
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 150/337 (44%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ Y + I M++ G++PDV+TY ++I R + ++D + M++
Sbjct: 391 ILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDK 450
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ Y L+ G +A + ++ L PC +F ++N LCK A
Sbjct: 451 GVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEA 510
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+F + + G ++ + LI G C G++ A + + G P+ +TY T++
Sbjct: 511 QRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNG 570
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C +N + GL + + KG F Y ++ GR A + ++M+ G+ +
Sbjct: 571 CCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVT 630
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I +Y+ L+ C+ E A + ++ + D I+I + KA + A
Sbjct: 631 IPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFA 690
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
+ G ++ Y +++ L K+G ++ A VF M
Sbjct: 691 SIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVM 727
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 170/383 (44%), Gaps = 42/383 (10%)
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR- 122
P V++Y+ L+ C + + D A F ++ + + +L GLC + TD A+
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK-ELGDSGHAP-NAITYTTIMKC 180
+F + + G VP+ ++Y+ ++K +C GR + A IL+ + G P N + Y+T++
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+ K ++ M ++G + Y +VI A K + +A + QMV +GVQ D
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR---- 296
V+YNTLI+ Y G+ + A + EM +G + T + + LCK G I+ AR
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFD 340
Query: 297 -----------------LH--------------LEYMNKIGFDSNLEAYNCIVDRLGKDG 325
LH M + G N +N +V+ K G
Sbjct: 341 SMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCG 400
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+ A+ +FE M+ + D TY +++H C+ + A + GV + +
Sbjct: 401 MVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQ 460
Query: 382 AVVDGLRHSGCRREAKKIQSKIR 404
++ G G +A+++ +IR
Sbjct: 461 CLIQGFCTHGDLVKAEELVYEIR 483
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 132/298 (44%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C ++ +R G+ P ++++ SLI + + + + D ++ G
Sbjct: 462 LIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTG 521
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
DV + SL+ +GK EA RV M+ + P T+ ++NG CKN D+ L
Sbjct: 522 EKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGL 581
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR L G P TY I++ GL AGR A+ + +E+ +SG A TY+ ++
Sbjct: 582 ILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGL 641
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
RN + + + + FD +I+ K R +EA + G+ +
Sbjct: 642 CRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTV 701
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+Y ++ KEG +E A + M K G + +++ L + G I A +++
Sbjct: 702 QTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYM 759
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 200/429 (46%), Gaps = 45/429 (10%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D Y + M + GI P+VVTY +I G + ++ + + +M++ G+ P++ +Y L
Sbjct: 221 DKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCL 280
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+H +G+ E R+ ++M L P T+ ++L+ LCK A ++F + + G
Sbjct: 281 IHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGI 340
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG-- 190
P++ Y I++ G G L L + +G +PN + + C F +K +G
Sbjct: 341 KPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVF-CAFA-KKAMIGEA 398
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI-- 248
++I + M+++G + + Y T+I A K+GR+ +A QM+ +GV +IV + +L+
Sbjct: 399 MDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYG 458
Query: 249 ----------------------------------NLYCKEGKLEAAYLLLDEMEKQGFEC 274
NL C EG++ A L+D ME+ G
Sbjct: 459 LCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNL-CTEGRVMKAQRLIDLMERVGTRP 517
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
D ++ LI G C G A L+ M +G N YN ++ +DG+ID A +VF
Sbjct: 518 DIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVF 577
Query: 335 ESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
+ M TY++++H L K +R A +L L+ + SG + +++GL +
Sbjct: 578 QEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKN 637
Query: 391 GCRREAKKI 399
C EA K+
Sbjct: 638 NCVDEALKM 646
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 189/394 (47%), Gaps = 7/394 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI---PPDVWSY 69
+A +L RM E G +P+VV+YN+L+ G + +L+LL M + + PP++ SY
Sbjct: 148 EAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSY 207
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N++++ F G+ D+A +F DM + P T+ I+++GLCK + D A +F+ +
Sbjct: 208 NTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMID 267
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G P +VTY LI G G+ + +LKE+ G P+ TY ++ + K
Sbjct: 268 KGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTE 327
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
++ +M RKG D Y ++ + G L E +++ MV +G+ + +N +
Sbjct: 328 ARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFC 387
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
+ K+ + A + ++M +QG + + LID LCK G + A L M G
Sbjct: 388 AFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAP 447
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
N+ + +V L K + A +F M + + +++++ NLC R+ A +L+
Sbjct: 448 NIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLI 507
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ G R + A++ G G EA K+
Sbjct: 508 DLMERVGTRPDIISYNALIRGHCLVGKTDEASKL 541
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 169/372 (45%), Gaps = 8/372 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LIDA C+ D N+M G++P++V + SL+ G + +L EM+ G
Sbjct: 420 LIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQG 479
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V +N++M L G+ +A R+ M P ++N ++ G C TD A
Sbjct: 480 IHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEAS 539
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + G P TYN L+ G C+ GR+ A + +E+ +G P +TY TI+
Sbjct: 540 KLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGL 599
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ R++ E+ M G + + Y ++ K + EA + + + +Q+DI
Sbjct: 600 FKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDI 659
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+++N +I K+G+ E A L + G D T+ ++ + L + G+++
Sbjct: 660 ITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSE 719
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD---SFTYSSMVHNLC----- 353
M K G N N +V RL G I A ++ K+ + +SM+ +L
Sbjct: 720 MEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSREEH 779
Query: 354 KAKRLPSASKLL 365
+AK LP L
Sbjct: 780 QAKSLPEKYHFL 791
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 156/337 (46%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
I N+MR+ G+SP+VV Y +LI + + + ++M+ G+ P++ + SL++ L
Sbjct: 401 IFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLC 460
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ K ++A +F +M+ + P FN ++ LC A R+ +++ G P+++
Sbjct: 461 TIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDII 520
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
+YN LI+G C G+ A +L + G PN TY T++ R+ + + M
Sbjct: 521 SYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEM 580
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
G T Y T++ K R EA + M+T G Q I +YN ++N K +
Sbjct: 581 LSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCV 640
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A + + + + D T I+I L K G + A ++ G ++ Y I
Sbjct: 641 DEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLI 700
Query: 318 VDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCK 354
+ L ++G ++ +F ME S M++ L +
Sbjct: 701 AENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVR 737
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 156/388 (40%), Gaps = 37/388 (9%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSC--SLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++R +S + +I R LS +L L DE L P + ++N L+ +
Sbjct: 1 MSRRVSTAVSDRCLELERIIGARARAGSLSVDDALKLFDEFLHHARPASIIAFNQLLAAV 60
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ ++ + C FN M+ C P++
Sbjct: 61 SSASRRGSSSTSELVVSC---------FNRMIRDCCSK-----------------VAPDV 94
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM--KCCFRNRKYKLGLEIL 194
TY+IL+ C+ GRL + +G N + + C R + +L
Sbjct: 95 FTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMGVLL 154
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ---LDIVSYNTLINLY 251
M G T + Y T++ F R +EA + + M V+ ++VSYNT+IN +
Sbjct: 155 RRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGF 214
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
EG+++ AY L +M QG + T+TI+IDGLCKA + A + M G N+
Sbjct: 215 FTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNI 274
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLS 367
Y C++ G+ + + + M D FTY ++ LCK + A KL S
Sbjct: 275 VTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDS 334
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRRE 395
++ G++ S ++ G G E
Sbjct: 335 MIRKGIKPDVSIYGIILHGYATKGALSE 362
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 172/342 (50%), Gaps = 4/342 (1%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
ISP+V+T+N +I + L+ ++ + +M PDV++Y +LM L + + DEA
Sbjct: 165 ISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAV 224
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ +M P TFN+++NGLCK ++ + G P VTYN LI GL
Sbjct: 225 SLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGL 284
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C G+L A +L + S PN +TY TI+ + + G +L+ M+ +GY +
Sbjct: 285 CLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNE 344
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ Y +I+ K G+ +EA ++M +L+ + Y+ +I+ C++GK + A +L E
Sbjct: 345 YVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSE 404
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M + + YT++ L+ G +AGN A + M K F N Y+ ++ L KDGK
Sbjct: 405 MTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGK 464
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
+ A+ V+ M K D Y SM++ L A + A +L
Sbjct: 465 VKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQL 506
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 167/366 (45%), Gaps = 20/366 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + ++L+RM + P+VVTY ++I G + +L M E G
Sbjct: 280 LIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERG 339
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ + Y++L+ LF+ GK EA ++F++M + T ++ +++GLC++ D AL
Sbjct: 340 YHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEAL 399
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + P TY+ L+KG +AG A + K++ N + Y+ ++
Sbjct: 400 EVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGL 459
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV--TDGVQL 239
++ K K + + + M KG D Y ++I G +++A +M+ Q
Sbjct: 460 CKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQP 519
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+V+YN L+N CK+ + A LL+ M +G + D T I + L R L
Sbjct: 520 DVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTL---------REKL 570
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ E + +V RL K ++ A + E M K T++ +V +LC
Sbjct: 571 DPPQ-----DGREFLDGLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNP 625
Query: 356 KRLPSA 361
K++ +A
Sbjct: 626 KKVQAA 631
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 182/382 (47%), Gaps = 11/382 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD-LLDEMLE 59
++I +C+ + G+ + + G D + N L+ G + ++ LL +M E
Sbjct: 89 IVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPE 148
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT---ATFNIMLNGLCKNRY 116
+G V SYN+L+ L + +EA + M+ G + C+ ++NI++NG
Sbjct: 149 VGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQ 208
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
D A +F + G P++VTYN +I GLCKA + A + +++ + G PN +TY T
Sbjct: 209 VDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNT 265
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
I+ + ++ + + M KG Y T+I K + A +QM+ G
Sbjct: 266 IIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRG 325
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
V+ D V+YNT+I+ CK ++ A + +M +G + D T+TI+IDGLCKA ++ A
Sbjct: 326 VKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAE 385
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNL 352
+ M G N YNC++ G+ + + + M D FTY ++ L
Sbjct: 386 GVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYL 445
Query: 353 CKAKRLPSASKLLLSCLKSGVR 374
CK + A L S ++ G++
Sbjct: 446 CKNGKCNEARSLFDSMIRKGIK 467
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 176/377 (46%), Gaps = 4/377 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ D + +M E G+ P+ VTYN++I G + + + + +M++ G
Sbjct: 231 IIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKG 290
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P +YN+++ L + D A VFQ MI + P T+N +++GLCK + D A
Sbjct: 291 VKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAE 350
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ + G P+ +TY I+I GLCKA + A + +++ D G PN TY ++
Sbjct: 351 GVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGY 410
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+++ ++ + M D F Y ++ K G+ EA + M+ G++ +
Sbjct: 411 LSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSV 470
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
Y +++ Y K+G L + LL+ M G + +I K I
Sbjct: 471 TIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIK 530
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
M + G N+ Y ++D L K G++D A+ F M ++ ++S+V+ LC +
Sbjct: 531 MKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDK 590
Query: 358 LPSASKLLLSCLKSGVR 374
+L L L G+R
Sbjct: 591 WEKVEELFLEMLNQGIR 607
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 198/442 (44%), Gaps = 39/442 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ S D + +M + G+ P+ TYN LI G + + EM
Sbjct: 370 IIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAH 429
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG---------- 110
+ PDV++Y L+ L + GK +EA +F MI + P + IML+G
Sbjct: 430 DLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEM 489
Query: 111 ----------------------LC---KNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+C K D + +F +++ G P +VTY LI
Sbjct: 490 HDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDA 549
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCK GR+ A ++ + G PN + + +++ K++ E+ M +G D
Sbjct: 550 LCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPD 609
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ TV+ K GR+ EA ++ MV G++ D++SYNTLI+ +C +++ A LLD
Sbjct: 610 IVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLD 669
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M G + + ++ L+ G CKAG I A M + G +E YN I++ L + G
Sbjct: 670 GMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSG 729
Query: 326 KIDHA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+ A +N+ +S ++ TYS ++ CK A K+ S +++
Sbjct: 730 RFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFN 789
Query: 382 AVVDGLRHSGCRREAKKIQSKI 403
++DGL G + +A + + I
Sbjct: 790 IMIDGLFKGGRKEDAMDLFAAI 811
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 157/329 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LIDA C+ D N+M G++P+ V +NSL+ G +L EML G
Sbjct: 546 LIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQG 605
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+ +N+++ L + G+ EA R+ M+C L P ++N +++G C D A+
Sbjct: 606 IRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAV 665
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ G+ G P +V+YN L+ G CKAGR+ A + +E+ G P TY TI+
Sbjct: 666 KLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGL 725
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
FR+ ++ E+ M + + Y ++ F K EA + + + +QLDI
Sbjct: 726 FRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDI 785
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+++N +I+ K G+ E A L + G T+ ++ + L + G+++
Sbjct: 786 ITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSV 845
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
M K G N N ++ +L G+I A
Sbjct: 846 MEKSGTAPNSHMLNALIRKLLDRGEIPRA 874
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 186/399 (46%), Gaps = 4/399 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ + ++ + M GI P V Y ++ G + LS DLL+ M+
Sbjct: 440 LLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVAN 499
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+ +N+++ + DE +F M L+P T+ +++ LCK D+A
Sbjct: 500 GISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDA 559
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ F + G P V +N L+ GLC + + E+ + G P+ + + T++
Sbjct: 560 VLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCN 619
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + ++ +M G D Y T+I R+ EA ++ MV+ G++ +
Sbjct: 620 LCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPN 679
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IVSYNTL++ YCK G+++ AY L EM ++G T+ +++GL ++G AR
Sbjct: 680 IVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYV 739
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE---SMEVK-DSFTYSSMVHNLCKAK 356
M K ++ Y+ I+D K+ D A +F+ SM+++ D T++ M+ L K
Sbjct: 740 NMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGG 799
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
R A L + +G+ + + + L G E
Sbjct: 800 RKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEE 838
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 161/347 (46%), Gaps = 19/347 (5%)
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y+ ++ C ++G+ + F ++ N +L GLC + A+
Sbjct: 80 VAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAM 139
Query: 122 R-MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL---GDSGHAPNAITYTTI 177
+ R + + G +V+YN L+KGLC R AR +L + DS +P+ ++Y +
Sbjct: 140 HVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIV 199
Query: 178 MKCCFR----NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
+ F ++ Y L LE+ G + D Y T+I K + A D +QMV
Sbjct: 200 INGFFNEGQVDKAYSLFLEM-------GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMV 252
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
GV+ + V+YNT+I+ CK +++ A + +M +G + T+ +IDGLCKA +
Sbjct: 253 EKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVD 312
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 349
A + M G + YN I+D L K ID A VF+ M K D+ TY+ ++
Sbjct: 313 RAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIII 372
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
LCKA+ + A + + GV+ ++ G +G E
Sbjct: 373 DGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEV 419
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 153/336 (45%), Gaps = 4/336 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C ++ + M GI PD+V +N+++ + + + L+D M+ MG
Sbjct: 581 LVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMG 640
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ PDV SYN+L+ HC + DEA ++ M+ L P ++N +L+G CK DN
Sbjct: 641 LKPDVISYNTLIDGHCF--ASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDN 698
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +FR + + G P + TYN ++ GL ++GR AR + + S + TY+ I+
Sbjct: 699 AYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILD 758
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+N + +I ++ D + +I K GR ++A D + +G+
Sbjct: 759 GFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVP 818
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+V+Y + +EG LE L MEK G + + LI L G I A +L
Sbjct: 819 SVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYL 878
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
+++ F + ++ ++ HA ++ E
Sbjct: 879 SKLDEKNFSLEASTTSMLISLFSREEYQQHAKSLPE 914
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 168/354 (47%), Gaps = 21/354 (5%)
Query: 50 SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA-------NRVFQDMICGD-LTPCT 101
+L L DE+L P V + N L+ + + + NR+ +D C + + P
Sbjct: 27 ALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRD--CSNKVAPDC 84
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL-K 160
T++I++ C+ + F + K G+ + + N L+KGLC R+ A +L +
Sbjct: 85 CTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLR 144
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM---KRKGYTFDGFGYCTVIAAFV 217
++ + G ++Y T++K R+ + E+L M + + D Y VI F
Sbjct: 145 QMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFF 204
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 277
G++ +A +M GV D+V+YNT+I+ CK +++ A + +M ++G + +
Sbjct: 205 NEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNV 261
Query: 278 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
T+ +IDGLCKA + A + M G + YN I+D L K +D A VF+ M
Sbjct: 262 TYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQM 321
Query: 338 ---EVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
VK D TY++++ LCKA+ + A + + GV+ ++DGL
Sbjct: 322 IDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGL 375
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 60/143 (41%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D +C+ FD + I + + D++T+N +I G + ++DL +
Sbjct: 755 IILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPAN 814
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P V +Y + L + G +E + +F M P + N ++ L A
Sbjct: 815 GLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRA 874
Query: 121 LRMFRGLQKHGFVPELVTYNILI 143
L + F E T ++LI
Sbjct: 875 GAYLSKLDEKNFSLEASTTSMLI 897
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 192/436 (44%), Gaps = 75/436 (17%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ + C D T+ + +R ++PD +TY++L+ G + L +LDLLDEM
Sbjct: 163 IVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRS 222
Query: 61 GIPPDVWSYNSLMHCLFQLG------------------KPD------------------E 84
G+ PDV YN+L+ F+ G +P+ E
Sbjct: 223 GVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKE 282
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
V++ M+ +L P T+ I+++GLC++ D A R++ + K G V + YN L+K
Sbjct: 283 VGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVK 342
Query: 145 GLCKAGR------------------LRTARWILKELGDSGHA-----------------P 169
G C+AGR LRT ++K L DSG P
Sbjct: 343 GFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIP 402
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
+ +T+ T++ +N I + G D F Y ++I +GRL +A
Sbjct: 403 DTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVY 462
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
E+M DG + + YN LI+ +C+ + A + +M G T+ LIDGLCKA
Sbjct: 463 EKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKA 522
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 345
+ A M + GF ++ Y ++ L D KID A+++++ + K D +
Sbjct: 523 EKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMH 582
Query: 346 SSMVHNLCKAKRLPSA 361
+ ++H LC A ++ A
Sbjct: 583 NILIHGLCSAGKVDEA 598
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 176/356 (49%), Gaps = 15/356 (4%)
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD----LTPCTATFNIMLNGLCKNR 115
+G P + S+N+L+ + + +A+ F + G + P T+NI+L LC
Sbjct: 113 LGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARG 172
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D A+ +F L++ P+ +TY+ L+ GL K RL A +L E+ SG P+ + Y
Sbjct: 173 DLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYN 232
Query: 176 TIMKCCFRNRKYKLGLEILSAM-KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
++ CF+ +++ + + + K G + Y ++ K GR KE + E+MV
Sbjct: 233 ALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVA 292
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
+ +Q D+++Y LI+ C+ G ++ A + E+ K G D + L+ G C+AG ++
Sbjct: 293 NNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQE 352
Query: 295 ARLHLEYMNKIGFDS--NLEAYNCIVDRLGKDGKIDHAINVFESME-----VKDSFTYSS 347
A ++ + GF NL YN ++ L G +D AI +++ +E + D+ T+ +
Sbjct: 353 A---WKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGT 409
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++H LC+ A + SG ++ + ++++GL + G +A K+ K+
Sbjct: 410 LIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKM 465
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 154/301 (51%), Gaps = 3/301 (0%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
PD VT+ +LI G +N + + + +E G DV+SY+S+++ L +G+ +A +V
Sbjct: 402 PDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKV 461
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
++ M P + +N +++G C+ T +A+R++ + +G P ++TYN LI GLCK
Sbjct: 462 YEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCK 521
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
A + + A + +E+ ++G P+ TY ++++ F ++K L I + KG D
Sbjct: 522 AEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMM 581
Query: 209 YCTVIAAFVKIGRLKEATDYMEQM-VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
+ +I G++ EA M ++V+YNTL++ + G ++ A L +
Sbjct: 582 HNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSI 641
Query: 268 EKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
+ G E D ++ I GLC I +G +L E +++ G + +N +V + K G
Sbjct: 642 TEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSR-GIIPTVITWNILVRAVIKYGP 700
Query: 327 I 327
I
Sbjct: 701 I 701
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 165/339 (48%), Gaps = 5/339 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ +CQ + + AG+ ++ TYN +I G + ++ +++L D +LE
Sbjct: 340 LVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWD-LLEKD 397
Query: 62 IP--PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ PD ++ +L+H L Q G ++A +F++ +++ M+NGLC +
Sbjct: 398 VACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVD 457
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A++++ + K G P YN LI G C+ R A I ++ D+G +P ITY T++
Sbjct: 458 AVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLID 517
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ KY+ + M G+T D Y ++I ++ +A +Q++ G+++
Sbjct: 518 GLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKV 577
Query: 240 DIVSYNTLINLYCKEGKL-EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D++ +N LI+ C GK+ EA ++ D EK+ + T+ L+DGL + G I A
Sbjct: 578 DVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATL 637
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
+ + G + ++ +YN + L +I I + + +
Sbjct: 638 WTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEV 676
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 138/293 (47%), Gaps = 1/293 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI CQ + +TI R +G DV +Y+S+I G L ++ + ++M + G
Sbjct: 410 LIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDG 469
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ YN+L+ Q+ + +A R++ M +P T+N +++GLCK A
Sbjct: 470 CKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEAS 529
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ R + ++GF P++ TY LI+GL ++ A I K++ G + + + ++
Sbjct: 530 SVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGL 589
Query: 182 FRNRKYKLGLEILSAMK-RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K L + S MK +K + Y T++ + G + +A + DG++ D
Sbjct: 590 CSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPD 649
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
I+SYNT I C ++ LLDE+ +G T IL+ + K G I+
Sbjct: 650 IISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 203/413 (49%), Gaps = 10/413 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C+ G ++L+ M + SPDVVT+N LI ++D L M+ G
Sbjct: 253 MICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSG 312
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P V ++ +++H L + G EA ++F + + P A +N +++G K R A
Sbjct: 313 VEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQAS 372
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ ++ G P+ VT+NIL+ G K GR+ + +LK+L SG ++ Y ++
Sbjct: 373 LLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSL 432
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +++L + KG T + ++I A+ + G +A + MV G
Sbjct: 433 CWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSS 492
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ N+L+ C++G L+ A +LL M ++GF +K +T+L+DG K N++GA+ +
Sbjct: 493 STCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKE 552
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M + G + A+ ++D L K G ++ A VF M V ++F Y+S++ LC R
Sbjct: 553 MKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGR 612
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK--IQSKIRMAKI 408
+ A KL + G+ ++DG CRR K I++ + M +I
Sbjct: 613 VTEALKLEKEMRQKGLLSDTFTFNIIIDGF----CRRGQMKFAIETFLDMQRI 661
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 190/381 (49%), Gaps = 12/381 (3%)
Query: 1 MLIDAYC----QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 56
+LI+A C +V+ D L+ M +G+ P V T+ +++ R + + L D
Sbjct: 287 ILINACCIGGRTWVAIDW----LHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDG 342
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
+ +MGI P+ YN+LM F+ + +A+ ++++M ++P TFNI++ G K
Sbjct: 343 IQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGR 402
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
+++ R+ + L G + Y++++ LC AGRL A +L+EL + G + + + +
Sbjct: 403 IEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNS 462
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ R E M R G+T +++ + G L+EA + +M+ G
Sbjct: 463 LIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKG 522
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
++ V+Y L++ Y K LE A L EM+++G D T LIDGL KAGN++ A
Sbjct: 523 FPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAY 582
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
M+ IGF N AYN ++ L G++ A+ + + M K D+FT++ ++
Sbjct: 583 EVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGF 642
Query: 353 CKAKRLPSASKLLLSCLKSGV 373
C+ ++ A + L + G+
Sbjct: 643 CRRGQMKFAIETFLDMQRIGL 663
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 175/376 (46%), Gaps = 4/376 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D Y + + MR G+SPD VT+N L+ G + + S LL +++ G
Sbjct: 358 LMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSG 417
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D Y+ ++ L G+ DEA ++ Q+++ LT FN ++ + D A
Sbjct: 418 LFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAF 477
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+R + + GF P T N L+ GLC+ G L+ AR +L + + G N + YT ++
Sbjct: 478 EAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGY 537
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ + + MK +G D + +I K G ++EA + +M G +
Sbjct: 538 FKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNN 597
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN+LI C G++ A L EM ++G D +T I+IDG C+ G +K A
Sbjct: 598 FAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLD 657
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M +IG ++ +N ++ K + A + M D TY++ +H C+ ++
Sbjct: 658 MQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRK 717
Query: 358 LPSASKLLLSCLKSGV 373
+ A +L + +G+
Sbjct: 718 MNQAVIILDQLISAGI 733
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 155/330 (46%), Gaps = 1/330 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI AY + D + M G +P T NSL+ G R L + LL MLE G
Sbjct: 463 LIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKG 522
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + +Y L+ F++ + A ++++M + P F +++GL K + A
Sbjct: 523 FPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAY 582
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + GFVP YN LI+GLC GR+ A + KE+ G + T+ I+
Sbjct: 583 EVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGF 642
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + K +E M+R G D F + +I + K + A + + +M + G+ DI
Sbjct: 643 CRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDI 702
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YNT ++ YC+ K+ A ++LD++ G D T+ ++ G+C + + A +
Sbjct: 703 TTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGIC-SDILDRAMILTAK 761
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
+ K+GF N+ N ++ K G + A+
Sbjct: 762 LLKMGFIPNVITTNMLLSHFCKQGMPEKAL 791
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 164/358 (45%), Gaps = 41/358 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ + C D +L + E G++ VV +NSLI +R
Sbjct: 427 VMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRA---------------- 470
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D+A ++ M+ TP ++T N +L GLC+ + A
Sbjct: 471 -------------------GLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEA 511
Query: 121 -LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+ ++R L+K GF V Y +L+ G K L A+++ KE+ + G P+A+ +T ++
Sbjct: 512 RILLYRMLEK-GFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALID 570
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + E+ M G+ + F Y ++I GR+ EA ++M G+
Sbjct: 571 GLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLS 630
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D ++N +I+ +C+ G+++ A +M++ G D +T ILI G CKA ++ GA +
Sbjct: 631 DTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIV 690
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLC 353
M G D ++ YN + + K++ A+ + + + V D+ TY++M+ +C
Sbjct: 691 NKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGIC 748
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 156/315 (49%), Gaps = 8/315 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D Y + + + + M+E GI PD V + +LI G ++ + + ++ EM +
Sbjct: 532 VLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAI 591
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ ++YNSL+ L G+ EA ++ ++M L T TFNI+++G C+ A
Sbjct: 592 GFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFA 651
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ F +Q+ G +P++ T+NILI G CKA + A I+ ++ G P+ TY T M
Sbjct: 652 IETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHG 711
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R RK + IL + G D Y T+++ L A +++ G +
Sbjct: 712 YCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICS-DILDRAMILTAKLLKMGFIPN 770
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN----IKGA- 295
+++ N L++ +CK+G E A + ++ + F D+ ++ IL C + ++G
Sbjct: 771 VITTNMLLSHFCKQGMPEKALIWGQKLREISFGFDEISYRILDQAYCLMQDDVELVRGTY 830
Query: 296 --RLHLEYMNKIGFD 308
L ++++ I FD
Sbjct: 831 EKHLFMDFLMYITFD 845
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 85/203 (41%), Gaps = 4/203 (1%)
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
T++ F+ +G EA + + M GV+ + S L+ L + G + + L +M +
Sbjct: 182 TLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIFK 241
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
G T +I G C+ + L M K ++ +N +++ G+ A
Sbjct: 242 GPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVA 301
Query: 331 INVFESM---EVKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
I+ M V+ S T+++++H LC+ + A KL G+ + ++DG
Sbjct: 302 IDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDG 361
Query: 387 LRHSGCRREAKKIQSKIRMAKIS 409
+ +A + ++R +S
Sbjct: 362 YFKAREVAQASLLYEEMRTTGVS 384
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 173/360 (48%), Gaps = 7/360 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYN 70
+A +L+RM E G P+ V+Y+ ++ NS+ +LDLL M + G PDV +Y+
Sbjct: 210 EAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYS 269
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+++H F G+ +A +F +M + P T+N++++ LCK R D A + R +
Sbjct: 270 TVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTD 329
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G P+ VTY+ +I G GRL+ A + +E+ G PN +T + + ++ + K
Sbjct: 330 GAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEA 389
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
E +M KG+ D F YCT++ + G + M ++G+ + + LI+
Sbjct: 390 AEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHA 449
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
Y K G ++ A L+ EM++QG D T++ +I + G + A M G N
Sbjct: 450 YAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPN 509
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK-----DSFTYSSMVHNLCKAKRLPSASKLL 365
Y+ I+ G + A + M K D +SS++++LCK R+ A +
Sbjct: 510 TAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIF 569
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 190/401 (47%), Gaps = 5/401 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++IDA C+ + D +L +M G PD VTY+ +I G L + + EM +
Sbjct: 305 LIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKR 364
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P++ + NS + L + G+ EA F M P ++ +L+G +
Sbjct: 365 GLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADM 424
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +F ++ +G + ILI K G + A I E+ G +P+ +TY+T++
Sbjct: 425 IGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVIST 484
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV-QL 239
R + +E + M +G + Y ++I F G L +A + + +M+ G+ +
Sbjct: 485 FSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRP 544
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DIV ++++IN CK+G++ A+ + D G T LIDG C G + A L
Sbjct: 545 DIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKIL 604
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ M +G + ++ YN ++D K+G+I+ + +F M+ K ++ TY M+ L +A
Sbjct: 605 DAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRA 664
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
R +A K ++SG + S ++ GL + C EA
Sbjct: 665 GRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEA 705
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 172/403 (42%), Gaps = 47/403 (11%)
Query: 18 ILNRM--REAGIS---PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
+ NR+ EAG P TYN L+ R L L +L G+ D + N+L
Sbjct: 139 LFNRVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTL 198
Query: 73 MHCLFQLGKPDEA-NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK-- 129
+ CL + +EA N + M P +++I+L LC N + AL + + + K
Sbjct: 199 LKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQG 258
Query: 130 --------------HGFV---------------------PELVTYNILIKGLCKAGRLRT 154
HGF P++VTYN++I LCKA +
Sbjct: 259 GACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDK 318
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
A +L+++ G P+ +TY+ ++ + K ++ MK++G + + +A
Sbjct: 319 AELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLA 378
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
+ K GR KEA ++ + M G + DI SY TL++ Y EG L + M+ G
Sbjct: 379 SLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAA 438
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
+ + TILI K G + A L M + G ++ Y+ ++ + G++ A+ F
Sbjct: 439 NCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKF 498
Query: 335 ESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
M + ++ YSS++ C L A +L+ + G+
Sbjct: 499 NQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGI 541
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 183/444 (41%), Gaps = 85/444 (19%)
Query: 15 GYTILNRMREA----------GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP 64
GY L R++EA G+ P++VT NS +A ++ + + D M G P
Sbjct: 344 GYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKP 403
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 124
D++SY +L+H G + +F M + F I+++ K D+A+ +F
Sbjct: 404 DIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIF 463
Query: 125 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
+Q+ G P++VTY+ +I + GRL A ++ G PN Y++I++ +
Sbjct: 464 TEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMH 523
Query: 185 RKYKLGLEILSAMKRKGYTF-DGFGYCTVIAAFVKIGRLKEATDY--------------- 228
E++S M KG D + +VI + K GR+ +A D
Sbjct: 524 GGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVIT 583
Query: 229 --------------------MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
++ M GV+ DIV+YNTL++ Y K G++ L EM+
Sbjct: 584 FNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQ 643
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
++G + + T+ I++ GL +AG AR M + G + Y I+ L ++ D
Sbjct: 644 RKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCAD 703
Query: 329 HAINVFESM--------------------------EVKDSF-------------TYSSMV 349
AI +F+ + E K+ F TY M+
Sbjct: 704 EAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMI 763
Query: 350 HNLCKAKRLPSASKLLLSCLKSGV 373
NL K + A+ + S KSG+
Sbjct: 764 INLLKDGGVEDANNMFSSMEKSGI 787
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 161/376 (42%), Gaps = 36/376 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD-------- 52
+LI AY + D I M++ G+SPDVVTY+++I+ +R L+ +++
Sbjct: 445 ILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVAR 504
Query: 53 ---------------------------LLDEMLEMGIP-PDVWSYNSLMHCLFQLGKPDE 84
L+ EM+ GIP PD+ ++S+++ L + G+ +
Sbjct: 505 GIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMD 564
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
A+ +F P TFN +++G C D A ++ ++ G P++VTYN L+
Sbjct: 565 AHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLD 624
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
G K GR+ + +E+ G PN +TY ++ FR + + M G T
Sbjct: 625 GYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTV 684
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
Y ++ + EA +++ T V+ I NT+IN K + E A L
Sbjct: 685 TVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELF 744
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+ G ++ T+ ++I L K G ++ A M K G N I+ L +
Sbjct: 745 ATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEK 804
Query: 325 GKIDHAINVFESMEVK 340
G+I A N ++ K
Sbjct: 805 GEIAKAGNYLSKVDGK 820
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 128/263 (48%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC D + IL+ M G+ PD+VTYN+L+ G +N ++ L L EM G
Sbjct: 587 LIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKG 646
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +Y ++ LF+ G+ A + F +MI T + + I+L GLC+N D A+
Sbjct: 647 VKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAI 706
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ L + N +I + K R A+ + + SG PN TY ++
Sbjct: 707 ILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINL 766
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + + S+M++ G +I ++ G + +A +Y+ ++ + L+
Sbjct: 767 LKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEA 826
Query: 242 VSYNTLINLYCKEGKLEAAYLLL 264
+ + +++L+ ++GK + LL
Sbjct: 827 STTSLMLSLFSRKGKYQEDIKLL 849
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 142/309 (45%), Gaps = 4/309 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I++ C+ + I + + G P V+T+NSLI G + + +LD M +G
Sbjct: 552 VINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVG 611
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ +YN+L+ F+ G+ ++ +F++M + P T T+ IML GL + T A
Sbjct: 612 VEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAAR 671
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ F + + G + Y I++ GLC+ A + ++LG + T++
Sbjct: 672 KKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAM 731
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ ++ + E+ + + G + Y +I +K G +++A + M G+
Sbjct: 732 YKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGS 791
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG----NIKGARL 297
N +I + ++G++ A L +++ + + T ++++ + G +IK
Sbjct: 792 RLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKLLPA 851
Query: 298 HLEYMNKIG 306
++ N G
Sbjct: 852 KYQFFNGFG 860
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 201/431 (46%), Gaps = 30/431 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D C+ ++ M GI PD VTY++L+ G + + +LL EM+
Sbjct: 366 IVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISN 425
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+ ++ N L+H L++ G+ EA + Q M T T NI++N LC N D A
Sbjct: 426 NCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKA 485
Query: 121 LRMFRGLQKHG----------FV-------------PELVTYNILIKGLCKAGRLRTARW 157
+ + G+ HG F+ P+LVTY+ +I GLCKAGRL A+
Sbjct: 486 IEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKK 545
Query: 158 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 217
E+ G P++ Y T + R K ++L M+++G Y ++I
Sbjct: 546 KFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLG 605
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 277
++ E +++M GV D+ +YN ++N C+ G++ A +LDEM ++G +
Sbjct: 606 SKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNIS 665
Query: 278 THTILIDGLCKAGNIKGARLHLEY-MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
+ ILI CKA + K + E +N G L Y + + L GK+ A +FE+
Sbjct: 666 SFRILIKAFCKACDFKASHEVFEIALNVCGHKEAL--YTLMFNELLVGGKVAEAKELFET 723
Query: 337 MEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 392
+ +F Y ++ LCK ++L +AS +L + G + ++ V+DG G
Sbjct: 724 ALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGN 783
Query: 393 RREAKKIQSKI 403
+ A ++ ++
Sbjct: 784 KHVADELAERM 794
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 195/438 (44%), Gaps = 37/438 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C + + ++M G P+ T+ L+ G R L S L+LL +M M
Sbjct: 152 LLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTM 211
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+ YN+L+ + GK +A ++ M L P TFN ++ LC + A
Sbjct: 212 GILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEA 271
Query: 121 LRMFRGLQKHGFV----PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
R+FR +Q + P ++TY +++ G CK G L A+ ++ + + + N +Y
Sbjct: 272 SRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNI 331
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
+ RN K +L M G D + Y V+ K G L +A M M+ +G
Sbjct: 332 WLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNG 391
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
+ D V+Y+TL++ YC +GK+ A LL EM + YT +L+ L K G I A
Sbjct: 392 ILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAE 451
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME------------------ 338
L+ MN+ G+ + N I++ L +G++D AI + M
Sbjct: 452 NLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLV 511
Query: 339 ---------VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
D TYS+++ LCKA RL A K + + G++ A+ D H
Sbjct: 512 DDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQ----PDSAIYDTFIH 567
Query: 390 SGCRREAKKIQSKIRMAK 407
S CR KI S ++ K
Sbjct: 568 SFCRE--GKISSAFQVLK 583
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 171/379 (45%), Gaps = 8/379 (2%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P + YN L+ R + + L +M+ + P+ +++N L+ L G ++A +
Sbjct: 110 PSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDAREL 169
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
F M P TF I++ G C+ L + ++ G +P V YN LI CK
Sbjct: 170 FDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCK 229
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK---RKGYTFD 205
G+ A ++ ++ + G P+ T+ + + + K I M+ G
Sbjct: 230 EGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHP 289
Query: 206 G-FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
Y ++ F K G L+EA ++ M + +++ SYN + + GKL A+++L
Sbjct: 290 NVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVL 349
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
EM G E D Y++ I++DGLCK G + AR+ + M + G + Y+ ++
Sbjct: 350 KEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSK 409
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
GK+ A N+ M +++T + ++H+L K R+ A LL + G +
Sbjct: 410 GKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTC 469
Query: 381 KAVVDGLRHSGCRREAKKI 399
+++ L ++G +A +I
Sbjct: 470 NIIINALCNNGQLDKAIEI 488
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 135/286 (47%), Gaps = 3/286 (1%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
+PD+VTY+++I+G + L + EM+ G+ PD Y++ +H + GK A +
Sbjct: 521 TPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQ 580
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
V +DM T+N ++ GL + +++ G P++ TYN ++ LC
Sbjct: 581 VLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLC 640
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS-AMKRKGYTFDG 206
+ GR+ A +L E+ G +PN ++ ++K + +K E+ A+ G+
Sbjct: 641 EGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHK--E 698
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y + + G++ EA + E + + Y LI+ CK+ KLEAA +L
Sbjct: 699 ALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHR 758
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
+ +G++ D + +IDG K GN A E M ++ +SN E
Sbjct: 759 LIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERMMEMASESNKE 804
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 6/195 (3%)
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTD--GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
++ K G +A + + + ++ Q I YN L+ +E ++E L +M
Sbjct: 80 NLVTVLAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMV 139
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
+ YT +LI LC +G+++ AR + M G + N + +V + G
Sbjct: 140 LARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLAS 199
Query: 329 HAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 384
+ + M + ++ Y++++ + CK + A KL+ + G+ + +
Sbjct: 200 KGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRI 259
Query: 385 DGLRHSGCRREAKKI 399
L SG EA +I
Sbjct: 260 SALCGSGKILEASRI 274
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 183/377 (48%), Gaps = 4/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I C+ + + +L +RE G SP+VV Y +LI G + + + DL EM +
Sbjct: 168 IVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKF 227
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + W+Y L+H LF+ G + +++ M + P T+N ++N CK+ T +A
Sbjct: 228 GLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDA 287
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F +++ G +VTYN LI GLC+ + A ++ ++ G PN ITY T++
Sbjct: 288 FKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDG 347
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K L + +K +G + Y +++ F K G A +++M G++
Sbjct: 348 FCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPS 407
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++Y LI+ + + +E A L ME+ G D +T+++LI G C G + A +
Sbjct: 408 KITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFK 467
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAK 356
M + N YN +V K+G A+ +F ME K+ +Y M+ LCK +
Sbjct: 468 LMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKER 527
Query: 357 RLPSASKLLLSCLKSGV 373
+ A L+ + +G+
Sbjct: 528 KSKEAEGLVEKMIDTGI 544
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 155/303 (51%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
G+ + +M+E G+ P++ TYN ++ ++ + L DEM E G+ ++ +YN+L+
Sbjct: 252 GFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIG 311
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
L + K +EAN+V M + P T+N +++G C AL + R L+ G P
Sbjct: 312 GLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
LVTYNIL+ G CK G A ++KE+ + G P+ ITYT ++ R + +++
Sbjct: 372 SLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLR 431
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
S M+ G T D Y +I F G++ EA+ + MV ++ + V YNT++ YCKE
Sbjct: 432 SPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKE 491
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
G A L EME++ + ++ +I+ LCK K A +E M G D +
Sbjct: 492 GSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSIL 551
Query: 315 NCI 317
N I
Sbjct: 552 NLI 554
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 180/392 (45%), Gaps = 38/392 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISP------------------------------- 29
++I+AY Q S D+ + N M + G P
Sbjct: 99 VMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIK 158
Query: 30 ---DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
DV ++ +I G + S DLL E+ E G P+V Y +L+ + G+ ++A
Sbjct: 159 VDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAK 218
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+F +M L T+ ++++GL KN M+ +Q+ G P L TYN ++
Sbjct: 219 DLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQH 278
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK GR + A + E+ + G + N +TY T++ R K +++ MK G +
Sbjct: 279 CKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNL 338
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T+I F +G+L +A + + G+ +V+YN L++ +CK+G A ++ E
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKE 398
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
ME++G + K T+TILID + N++ A M ++G ++ Y+ ++ G+
Sbjct: 399 MEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQ 458
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCK 354
++ A +F+ M K + Y++MV CK
Sbjct: 459 MNEASRLFKLMVAKKLEPNKVIYNTMVLGYCK 490
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 155/336 (46%), Gaps = 7/336 (2%)
Query: 34 YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF-QDM 92
Y +I ++ L S+ +EM++ G P +N+L+ + ++ R F +
Sbjct: 97 YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
I DL +F I++ G C+ + + + L++ GF P +V Y LI G CK G +
Sbjct: 157 IKVDLD--VYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEI 214
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
A+ + E+G G N TYT ++ F+N K G E+ M+ G + + Y V
Sbjct: 215 EKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
+ K GR K+A ++M GV +IV+YNTLI C+E K A ++D+M+ G
Sbjct: 275 MNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGI 334
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
+ T+ LIDG C G + A + G +L YN +V K G A
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGK 394
Query: 333 VFESME---VKDS-FTYSSMVHNLCKAKRLPSASKL 364
V + ME +K S TY+ ++ + + A +L
Sbjct: 395 VVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQL 430
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 91/170 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ M E GI P +TY LI R + ++ L M E+
Sbjct: 378 ILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEEL 437
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV +Y+ L+H G+ +EA+R+F+ M+ L P +N M+ G CK + A
Sbjct: 438 GLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRA 497
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
LR+FR +++ P + +Y +I+ LCK + + A +++++ D+G P+
Sbjct: 498 LRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPS 547
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 193/383 (50%), Gaps = 13/383 (3%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P+ T++ LIAG + L +++ ++MLE P++ N L+ L Q GK D+A +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH-GFVPELVTYNILIKGLC 147
F+ + C +P T NI++NG C+ + D AL +F ++K+ VPE TY +IK C
Sbjct: 61 FRGIQC---SPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM-KRKGYTFDG 206
K RL AR +L+E S + + I T++ + + ++ ++L M ++K D
Sbjct: 118 KMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ +I F K GR++EA + +E +V+ G + V+Y TLI+ +CK G L A L
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKV 235
Query: 267 MEKQGF--ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+ + E + T LI GLCKA ++ A ++ M ++ Y ++D L K
Sbjct: 236 LSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQ 295
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
G+ VFE M + TY+++VH CKA L A +++ S + G+ +
Sbjct: 296 GRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTY 355
Query: 381 KAVVDGLRHSGCRREAKKIQSKI 403
+++GL +G R A + KI
Sbjct: 356 TVLLEGLFENGKVRTATEFFEKI 378
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 186/373 (49%), Gaps = 17/373 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE- 59
+L+ + CQ D I R SP V+T N LI G LL +L+L EM +
Sbjct: 43 LLLASLCQAGKMDQAMAIF---RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKN 99
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC--GDLTPCTATFNIMLNGLCKNRYT 117
+ P+ +Y +++ C ++ + D+A ++ ++ C D+ T+ + G CK +
Sbjct: 100 FALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSSDVIAITS----VARGFCKAQRV 155
Query: 118 DNALRMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
D A ++ + +K P++V +N++I G CKAGR+R A +L+ L G PNA+TYTT
Sbjct: 156 DEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTT 215
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDG--FGYCTVIAAFVKIGRLKEATDYMEQMVT 234
++ ++ L++ + + + + + +I+ K RL+ A + ++QM
Sbjct: 216 LIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKA 275
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
++ D +Y TL++ CK+G+ + +EM ++G T+T L+ CKAG+++
Sbjct: 276 RDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQD 335
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVH 350
A+ + M G ++ Y +++ L ++GK+ A FE + + + YS++V
Sbjct: 336 AQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVR 395
Query: 351 NLCKAKRLPSASK 363
CKA + A K
Sbjct: 396 GCCKAALVDEAVK 408
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 139/288 (48%), Gaps = 3/288 (1%)
Query: 6 YCQFVSFDAGYTILNRMREA-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP 64
+C+ D Y +L M E PD+V +N +I G + + + ++L+ ++ MG P
Sbjct: 149 FCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVP 208
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGD--LTPCTATFNIMLNGLCKNRYTDNALR 122
+ +Y +L+ + G EA ++F+ + D P TFN +++GLCK ++A
Sbjct: 209 NAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFE 268
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ + ++ + TY L+ GLCK GR + +E+ G P+ +TYTT++
Sbjct: 269 LVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHC 328
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ + +++ +M KG D Y ++ + G+++ AT++ E+++ + V
Sbjct: 329 KAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAV 388
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
Y+ L+ CK ++ A EM + D T +L++ LCK G
Sbjct: 389 VYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRG 436
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+ + M G +P VVTY +L+ + L + ++ M+ G
Sbjct: 288 LMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKG 347
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
IPPDV +Y L+ LF+ GK A F+ ++ PC ++ ++ G CK D A+
Sbjct: 348 IPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAV 407
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
+ + + P+ T +L++ LCK GR
Sbjct: 408 KYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + + ++ +M+ + D TY +L+ G + S + +EML G
Sbjct: 253 LISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREG 312
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y +L+H + G +A +V + M+ + P T+ ++L GL +N A
Sbjct: 313 CNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTAT 372
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
F + + P V Y+ L++G CKA + A E+ D AP+ T
Sbjct: 373 EFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPAT 424
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A+C+ S ++ M GI PDV TY L+ G N + + + +++L
Sbjct: 323 LVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRER 382
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
PP Y++L+ + DEA + + +M+ L P AT +++ LCK TD
Sbjct: 383 CPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 195/401 (48%), Gaps = 4/401 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ +C+ F A +L M G++ +V YN++I ++ + +++ ++ M+E G
Sbjct: 280 IINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECG 339
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ +YN+L+ + GK EA+++ + + L P ++ +++ CK D A
Sbjct: 340 CKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRAS 399
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P+LVTY L+ GL AG + A I +++ + G P+A Y +M
Sbjct: 400 NWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGL 459
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K +L+ M + D F Y T++ F++ G L EA E + G+ I
Sbjct: 460 CKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGI 519
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V YN +I YCK G ++ A ++ M+K+ D++T++ +IDG K ++ GA+
Sbjct: 520 VGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFRE 579
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M K+ N+ Y +++ + G + ++ +F M+ V + TYS ++ + CK +
Sbjct: 580 MVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAK 639
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
L A+ L + +V+G +G R ++K
Sbjct: 640 LIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEK 680
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 180/403 (44%), Gaps = 4/403 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ C+ + G ++ G P+++ YN+LI G + + + L E+
Sbjct: 209 IMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLK 268
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P V +Y ++++ + G +R+ +M LT +N +++ K+ + A
Sbjct: 269 GFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKA 328
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ G+ + G P++VTYN LI G C+ G++ A +L++ G PN +YT ++
Sbjct: 329 VETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHA 388
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ Y L M +G+ D Y ++ V G + A E+M+ GV D
Sbjct: 389 YCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPD 448
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
YN L++ CK+ KL AA LLL EM Q D + + L+DG + GN+ AR E
Sbjct: 449 AGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFE 508
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ G + + YN ++ K G + A+ M+ D FTYS+++ K
Sbjct: 509 LTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQH 568
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L A K+ +K + ++++G G + KI
Sbjct: 569 DLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKI 611
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 174/376 (46%), Gaps = 8/376 (2%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD--VWSYNS--LMHCLFQLGKPDE 84
PDV+ NSL+ + + + L DEMLE+ D V +Y++ ++ L + GK +E
Sbjct: 163 PDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEE 222
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
++ +D P +N +++G CK + A +F L+ GF+P + TY +I
Sbjct: 223 GRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIIN 282
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
G CK G + +L E+ G N Y TI+ +++ +E + M G
Sbjct: 283 GFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKP 342
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D Y T+I+ + G++ EA +EQ + G+ + SY LI+ YCK+G + A L
Sbjct: 343 DIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWL 402
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
EM ++G + D T+ L+ GL AG + A E M + G + YN ++ L K
Sbjct: 403 IEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKK 462
Query: 325 GKIDHA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
K+ A + + + D+F Y+++V + L A KL ++ G+
Sbjct: 463 FKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGY 522
Query: 381 KAVVDGLRHSGCRREA 396
A++ G G ++A
Sbjct: 523 NAMIKGYCKFGMMKDA 538
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 173/419 (41%), Gaps = 67/419 (15%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D TI +M E G+ PD YN L++G + L + LL EML+ + PD + Y +L
Sbjct: 431 DVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATL 490
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK-----------NRYT---- 117
+ + G DEA ++F+ I + P +N M+ G CK NR
Sbjct: 491 VDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHL 550
Query: 118 --------------------DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 157
D A +MFR + K P +VTY LI G C+ G L +
Sbjct: 551 APDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLK 610
Query: 158 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK---------GYTFDGFG 208
I +E+ G PN +TY+ ++ + K M Y +GF
Sbjct: 611 IFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFS 670
Query: 209 YCTVIAAFVKIGRLKEAT-----DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
A K +E ++ +M++DG +YN+++ C+ G A L
Sbjct: 671 KNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQL 730
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA------YNCI 317
++M +G D + L+ G+C G K E+ N + + N Y+ I
Sbjct: 731 SNKMTSKGCIPDSVSFVALLHGVCLEGRSK------EWKNIVSCNLNERELQIAVNYSSI 784
Query: 318 VDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
+D+ G + ++ + ++M ++ ++S + N+ ++ +++L L K+GV +L
Sbjct: 785 LDQYLPQGTSEASV-ILQTM-FEECQSHSKVGDNI----QVSFSNQLYLHDTKAGVTLL 837
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 178/395 (45%), Gaps = 42/395 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D + D IL +M E G SP + TY +I G ++ + + + +ML G
Sbjct: 117 LVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNG 176
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI------------------------CGDL 97
PD + Y +L+ L ++GK DEA M+ G+L
Sbjct: 177 CRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNL 236
Query: 98 TPCTA--------------TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
A TFN ++ LCK T+ A+ + + + P L TY L+
Sbjct: 237 EDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLV 296
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G K GRL A LKE + G P+A+TYT+I+ + + + G E M+ +GY
Sbjct: 297 DGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYE 356
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y +I F+K + +A QM+ G + V+YN +++ CK G++ AY
Sbjct: 357 PDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYAT 416
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
ME++G T++ L+DG C GN+ A M G + NL +YN I+ L +
Sbjct: 417 FLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCR 476
Query: 324 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
GK+ A FE + + D +T++S +H LC+
Sbjct: 477 AGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQ 511
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 189/410 (46%), Gaps = 47/410 (11%)
Query: 30 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 89
D +L+ G + L ++ LLDEM PD+ ++ +++ L + + DEA V
Sbjct: 8 DTRVCTALLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKRLDEAFSVL 64
Query: 90 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
+ + P T+N+ ++GLCK D+A ++ + + + +P VTY L+ GL KA
Sbjct: 65 ERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKA 124
Query: 150 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 209
GRL A IL+++ + G++P TYT ++ + + + I M G D F Y
Sbjct: 125 GRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVY 184
Query: 210 CTVIAAFVKIGRLKEATDYMEQMVTD----GVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+I+ KIG+L EA Y+ QMV + GV+ D+V +N +I C G LE A D
Sbjct: 185 TALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFD 244
Query: 266 EM-----------------------------------EKQGFECDKYTHTILIDGLCKAG 290
E+ E++ F +T+T L+DG K G
Sbjct: 245 ELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFP-TLFTYTSLVDGFLKLG 303
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 346
+ A L L+ + GF + Y I+D L K G+++ F M + D+ TY+
Sbjct: 304 RLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYA 363
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+++ KAK +P A ++ L+SG + ++DGL +G EA
Sbjct: 364 ALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEA 413
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 192/403 (47%), Gaps = 17/403 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ D +++L R AG PD VTYN I G + + + LL +M E
Sbjct: 46 VVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEK 105
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P +Y +L+ L + G+ DEA + + M+ +P T+ ++++GL K + A
Sbjct: 106 KCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEA 165
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA----PNAITYTT 176
R+F + +G P+ Y LI GL K G+L A L ++ ++G A P+ + +
Sbjct: 166 RRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNL 225
Query: 177 IMK--CCFRNRKYKLGL--EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
+++ C N + L E+ ++ +TF+ ++AA K R +EA ++++M
Sbjct: 226 VIRQLCASGNLEDALAYFDELDDSLDLTHFTFN-----PLVAALCKAERTEEAIAFVKKM 280
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
+ +Y +L++ + K G+L+ A L L E ++GF D T+T +IDGLCK G +
Sbjct: 281 SERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRV 340
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSM 348
+ M G++ + Y ++D K I A V+ M V + TY+ +
Sbjct: 341 EEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNII 400
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ LCKA R+ A L+ + G A++DG G
Sbjct: 401 LDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEG 443
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 176/367 (47%), Gaps = 4/367 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A C+ + + +M E P + TY SL+ G + L +L L E +E G
Sbjct: 260 LVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERG 319
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +Y S++ L +LG+ +E F +M P T+ +++G K + A
Sbjct: 320 FIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAH 379
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R++R + + G V VTYNI++ GLCKAGR+ A + + G +TY+ +M
Sbjct: 380 RVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGF 439
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+E+ M +G + Y +I + G+L +A Y E+++ + D+
Sbjct: 440 CSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDV 499
Query: 242 VSYNTLINLYCKE-GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++N+ ++ C+ + L + M QG + ++++IL+DG+C+AG ++
Sbjct: 500 YTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFH 559
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYSSMVHNLCKAKR 357
M G ++ +N ++ L G++D A+ VF +E D+++Y S++ L + +R
Sbjct: 560 EMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAPDAWSYWSLLDALSRCER 619
Query: 358 LPSASKL 364
+ A L
Sbjct: 620 MEEARLL 626
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 114/226 (50%), Gaps = 2/226 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D C+ Y M E G VVTY++L+ G +S +++L ML+
Sbjct: 399 IILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDR 458
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT-DN 119
G P++ SYN ++ L + GK +A F+ ++ L P TFN L+GLC+ T +
Sbjct: 459 GCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGD 518
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+ +F + G P L +Y+IL+ G+C+AG L I E+ G AP+ + + T+++
Sbjct: 519 GVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIR 578
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
+ LE+ ++R+ D + Y +++ A + R++EA
Sbjct: 579 WLCIAGRVDEALEVFRELERRSAP-DAWSYWSLLDALSRCERMEEA 623
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 79/159 (49%), Gaps = 7/159 (4%)
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
L+N CK G+L+ A LLLDEM D T++I+GLC+ + A LE +
Sbjct: 13 TALLNGLCKTGQLDRAMLLLDEMPCSP---DMVAFTVVINGLCREKRLDEAFSVLERAVR 69
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPS 360
G + + YN +D L K ++D A + + M+ K + TY+++V L KA RL
Sbjct: 70 AGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDE 129
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
A +L ++ G V+DGL +G EA++I
Sbjct: 130 AMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRI 168
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 189/411 (45%), Gaps = 4/411 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ A C+ + D L +M G+ P+ TYN+LI G + ++ + EM
Sbjct: 260 VVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 319
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV + + LM L + GK EA VF M P ++ IMLNG +
Sbjct: 320 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMT 379
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + G P++ T+N+LIK G L A I E+ D G P+ +TY T++
Sbjct: 380 DLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 439
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R K +E + M +G D + Y +I F G L +A + + +++ +G+ LDI
Sbjct: 440 CRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 499
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V ++++IN CK G++ A + D G +++L+DG C G ++ A +
Sbjct: 500 VFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDA 559
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G + N Y +V+ K G+ID +++F M K + Y+ ++ L +A R
Sbjct: 560 MVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 619
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
A +SG+ + K V+ GL + C EA + ++R +
Sbjct: 620 TVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNV 670
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 200/411 (48%), Gaps = 6/411 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG-ATRNSLLSCSLDLLDEMLE 59
ML+ + C++ + + M G +P+V +Y ++ G AT+ L+ + DL D ML
Sbjct: 329 MLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMT-DLFDLMLG 387
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
GI PD++++N L+ G D+A +F +M + P T+ ++ LC+ D+
Sbjct: 388 DGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD 447
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+ F + G P+ Y+ LI+G C G L A+ ++ E+ ++G + + +++I+
Sbjct: 448 AMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 507
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + I G Y ++ + +G++++A + MV+ G++
Sbjct: 508 NLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 567
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ V Y TL+N YCK G+++ L EM ++G + + I+IDGL +AG A++
Sbjct: 568 NDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKF 627
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE---SMEVK-DSFTYSSMVHNLCKA 355
M + G N YN ++ L K+ D AI +F+ +M VK + T ++M+ + +
Sbjct: 628 HEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQT 687
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
+R+ A L S +SG+ ++ L G EA+ + S ++ A
Sbjct: 688 RRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 738
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 179/392 (45%), Gaps = 7/392 (1%)
Query: 2 LIDAYCQFVSFDAGYTIL-NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L+ +C+ D IL +R E G PDV +Y+ L+ + DLL M E
Sbjct: 152 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 211
Query: 61 GI--PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G PDV +Y++++ F+ G ++A +F++M+ + P T++ +++ LCK R D
Sbjct: 212 GAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMD 271
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A R + G +P TYN LI G G+ + A + KE+ P+ +T + +M
Sbjct: 272 KAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 331
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ K K ++ M KG + F Y ++ + G L + TD + M+ DG+
Sbjct: 332 GSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIA 391
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
DI ++N LI Y G L+ A ++ +EM G + D T+ +I LC+ G + A
Sbjct: 392 PDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 451
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
M G + AY+C++ G + A + + D +SS+++NLCK
Sbjct: 452 FNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK 511
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
R+ A + + G+ ++DG
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDG 543
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 177/407 (43%), Gaps = 5/407 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI AY D I N MR+ G+ PDVVTY ++IA R + +++ ++M++
Sbjct: 399 VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 458
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD ++Y+ L+ G +A + +++ + F+ ++N LCK +A
Sbjct: 459 GVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDA 518
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F G P V Y++L+ G C G++ A + + +G PN + Y T++
Sbjct: 519 QNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNG 578
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + GL + M +KG Y +I + GR A +M G+ ++
Sbjct: 579 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMN 638
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+YN ++ K + A L E+ + + T +I G+ + ++ A+
Sbjct: 639 KCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFA 698
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+++ G + Y+ ++ L K+G ++ A ++F SM+ DS + +V L K
Sbjct: 699 SISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKN 758
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG-CRREAKKIQSK 402
+ A L + + +VD G CR + + +K
Sbjct: 759 EIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFLPAK 805
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 169/384 (44%), Gaps = 42/384 (10%)
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P +Y LM C + +P+ A F ++ L N +L G C+ + TD AL
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEAL 166
Query: 122 R-MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH--APNAITYTTIM 178
+ + G VP++ +Y+IL+K LC G+ A +L+ + + G +P+ + Y+T++
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVI 226
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
F+ ++ M ++G D Y +V+ A K + +A ++ QMV GV
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+ +YN LI Y G+ + A + EM + D T ++L+ LCK G IK AR
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346
Query: 299 LEYMNKIGFDSNLEAYN----------CIVDR-----------LGKD------------- 324
+ M G + N+ +Y C+VD + D
Sbjct: 347 FDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYAN 406
Query: 325 -GKIDHAINVFESME---VK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
G +D A+ +F M VK D TY +++ LC+ ++ A + + GV K A
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 466
Query: 380 QKAVVDGLRHSGCRREAKKIQSKI 403
++ G G +AK++ S+I
Sbjct: 467 YHCLIQGFCTHGSLLKAKELISEI 490
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 168 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
+P + TY +M CC R + +L L FG
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAF-------------FG------------------- 135
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKL-EAAYLLLDEMEKQGFECDKYTHTILIDGL 286
Q++ G++++I+ N L+ +C+ + EA +LL + G D ++++IL+ L
Sbjct: 136 ---QLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSL 192
Query: 287 CKAGNIKGARLHLEYMNKIGF--DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 340
C G A L M + G ++ AY+ ++D K+G ++ A ++F+ M +
Sbjct: 193 CDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPP 252
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 400
D TYSS+VH LCKA+ + A L + GV ++ G +G +EA ++
Sbjct: 253 DFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVF 312
Query: 401 SKIRMAKI 408
++R I
Sbjct: 313 KEMRRHSI 320
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 188/411 (45%), Gaps = 4/411 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ A C+ + D L +M + P+ TYN+LI G + ++ + EM
Sbjct: 263 VVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 322
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV + + LM L + GK EA VF M P ++NIMLNG +
Sbjct: 323 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT 382
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + G P+ T+N+LIK G L A I E+ D G P+ +TY T++
Sbjct: 383 DLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 442
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R K +E + M +G D + Y +I F G L +A + + +++ +G+ LDI
Sbjct: 443 CRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 502
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V ++++IN CK G++ A + D G D + +L+DG C G ++ A +
Sbjct: 503 VFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDA 562
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G + N+ Y +V+ K G+ID +++F M + + YS ++ L +A R
Sbjct: 563 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGR 622
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
A +SG+ + V+ GL + C EA + ++R +
Sbjct: 623 TVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNV 673
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 198/410 (48%), Gaps = 4/410 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
ML+ + C++ + + M G +PDV +YN ++ G L DL D ML
Sbjct: 332 MLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD 391
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD +++N L+ G D+A +F +M + P T+ ++ LC+ D+A
Sbjct: 392 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 451
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ F + G P+ YN LI+G C G L A+ ++ E+ ++G + + +++I+
Sbjct: 452 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 511
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + I G D Y ++ + +G++++A + MV+ G++ +
Sbjct: 512 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 571
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V Y TL+N YCK G+++ L EM ++G + ++I+IDGL +AG A++
Sbjct: 572 VVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFH 631
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE---SMEVK-DSFTYSSMVHNLCKAK 356
M + G ++ YN ++ L K+ D AI +F+ +M VK + T ++M+ + + +
Sbjct: 632 EMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTR 691
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
R+ A L S +S + ++ L G EA+ + S ++ A
Sbjct: 692 RVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 741
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 178/392 (45%), Gaps = 7/392 (1%)
Query: 2 LIDAYCQFVSFDAGYTIL-NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L++ +C+ D IL +R E G PDV +Y+ L+ + DLL M E
Sbjct: 155 LLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 214
Query: 61 GI--PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G P+V +YN+++ F+ G ++A +F++M+ + P T+N +++ LCK R D
Sbjct: 215 GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMD 274
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A R + +P TYN LI G G+ + A + KE+ P+ +T + +M
Sbjct: 275 KAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 334
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ K K ++ M KG D F Y ++ + G L + TD + M+ DG+
Sbjct: 335 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 394
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D ++N LI Y G L+ A ++ +EM G + D T+ +I LC+ G + A
Sbjct: 395 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 454
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
M G + AYNC++ G + A + + D +SS+++NLCK
Sbjct: 455 FNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK 514
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
R+ A + + G+ ++DG
Sbjct: 515 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDG 546
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 168/384 (43%), Gaps = 42/384 (10%)
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P +Y LM C + +P+ A F ++ L N +L G C+ + TD AL
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169
Query: 122 R-MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH--APNAITYTTIM 178
+ + G VP++ +Y+IL+K LC G+ A +L+ + + G +PN + Y T++
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 229
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
F+ ++ M ++G D Y +V+ A K + +A ++ QMV V
Sbjct: 230 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 289
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+ +YN LI Y G+ + A + EM + D T ++L+ LCK G IK AR
Sbjct: 290 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 349
Query: 299 LEYMNKIGFDSNLEAYN----------CIVDR-----------LGKD------------- 324
+ M G + ++ +YN C+VD + D
Sbjct: 350 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 409
Query: 325 -GKIDHAINVFESME---VK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
G +D A+ +F M VK D TY +++ LC+ ++ A + + GV K A
Sbjct: 410 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 469
Query: 380 QKAVVDGLRHSGCRREAKKIQSKI 403
++ G G +AK++ S+I
Sbjct: 470 YNCLIQGFCTHGSLLKAKELISEI 493
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 42/248 (16%)
Query: 168 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
+P + TY +M CC R + +L L FG
Sbjct: 111 SPTSHTYAILMDCCTRAHRPELALAF-------------FG------------------- 138
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKL-EAAYLLLDEMEKQGFECDKYTHTILIDGL 286
Q++ G++++I+ N L+ +C+ + EA +LL + G D ++++IL+ L
Sbjct: 139 ---QLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSL 195
Query: 287 CKAGNIKGARLHLEYMNKIGF--DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 340
C G A L M + G N+ AYN ++D K+G ++ A ++F+ M +
Sbjct: 196 CDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPP 255
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 400
D TY+S+VH LCKA+ + A L + V ++ G +G +EA ++
Sbjct: 256 DLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVF 315
Query: 401 SKIRMAKI 408
++R I
Sbjct: 316 KEMRRHSI 323
>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 198/403 (49%), Gaps = 22/403 (5%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHC 75
+ MREA + PD+VTY L+ + L+ +L +LD M G + D+ N+++
Sbjct: 153 LFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDG 212
Query: 76 LFQLGKPDEA-----NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
L ++G+ +A R+ Q C P T T+N + + C+ D A ++ ++K
Sbjct: 213 LCKIGRLQDAIVFVDERMRQVHGCA---PNTVTYNCLADACCRVGDIDMACQIVERMEKE 269
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKE-----LGDSGHAPNAITYTTIMKCCFRNR 185
G P ++T N ++ GLC+ GR+ A +E L G NA+TY+T++
Sbjct: 270 GVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARG---NAVTYSTLVSAFLHCN 326
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
L +E+ M +GY D Y T+I+ + GRL +A + M G +LD +YN
Sbjct: 327 NVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYN 386
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
LI +C++ +L A+ L +EM+ G + D YT+ L+ LCKAG+ L M
Sbjct: 387 ILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDD 446
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EVK---DSFTYSSMVHNLCKAKRLPSA 361
G ++ + +V K GK D A+ +F SM E + ++ Y++++ LCK++ + A
Sbjct: 447 GCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVA 506
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
KL ++ V + A++ GL+ +A ++ +++
Sbjct: 507 IKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMK 549
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 173/367 (47%), Gaps = 11/367 (2%)
Query: 53 LLDEMLEMGIP-PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 111
L + L G P PDV ++NSL+ L + G +F M + P T+ I+LN L
Sbjct: 117 FLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRL 176
Query: 112 CKNRYTDNALRMFRGLQKHG--FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH-- 167
CK +AL++ + G ++V N ++ GLCK GRL+ A + E H
Sbjct: 177 CKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGC 236
Query: 168 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
APN +TY + C R + +I+ M+++G T + T++ ++GR+ A D
Sbjct: 237 APNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALD 296
Query: 228 YMEQMVTDGVQL--DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ + T ++ + V+Y+TL++ + + A L EM QG+ D + +I G
Sbjct: 297 FFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISG 356
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKD 341
L +AG + A M K GF + +AYN ++ + ++ A +FE M+ D
Sbjct: 357 LTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPD 416
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
+TY++++ LCKA + +LL + + G + +V G +G EA KI
Sbjct: 417 VYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFR 476
Query: 402 KIRMAKI 408
+ A+I
Sbjct: 477 SMGEARI 483
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 131/287 (45%), Gaps = 2/287 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L DA C+ D I+ RM + G++P+V+T N+++ G R + +LD E
Sbjct: 246 LADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTW 305
Query: 62 IPP--DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ + +Y++L+ A +F +M P + M++GL + +
Sbjct: 306 LEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVD 365
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + ++K GF + YNILI G C+ RL A + +E+ +G P+ TY T++
Sbjct: 366 ACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLS 425
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
C + + E+L M G + T++ + K G+ EA M +Q
Sbjct: 426 CLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQP 485
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ V YNTLI+ CK +++ A L DEM + + T+ L+ GL
Sbjct: 486 NTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGL 532
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 101/214 (47%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
I M++AG D YN LI G R L + L +EM G+ PDV++YN+L+ CL
Sbjct: 369 IAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLC 428
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G + + +MI P TF +++G CK TD AL++FR + + P V
Sbjct: 429 KAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTV 488
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
YN LI LCK+ + A + E+ ++ N TY ++K + E++ M
Sbjct: 489 IYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQM 548
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 231
K + T D ++ +IG + +MEQ
Sbjct: 549 KEERCTPDYVTMDVLMEWLPEIGETERLKCFMEQ 582
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 96/179 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C+ + + M+ AG+ PDV TYN+L++ + S +LL M++
Sbjct: 387 ILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDD 446
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P V ++ +L+H + GK DEA ++F+ M + P T +N +++ LCK+R D A
Sbjct: 447 GCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVA 506
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+++F ++++ + TYN L+KGL A ++ ++ + P+ +T +M+
Sbjct: 507 IKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLME 565
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 126/270 (46%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A+ + + + M + G PD V Y ++I+G T+ L + ++ M + G
Sbjct: 318 LVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAG 377
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
D +YN L+ + + EA+++F++M L P T+N +L+ LCK
Sbjct: 378 FKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVD 437
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P +VT+ L+ G CKAG+ A I + +G++ PN + Y T++
Sbjct: 438 ELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFL 497
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++R+ + +++ M+ + Y ++ ++A + M+QM + D
Sbjct: 498 CKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDY 557
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
V+ + L+ + G+ E +++ +++G
Sbjct: 558 VTMDVLMEWLPEIGETERLKCFMEQRDEKG 587
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ F A +L M + G P VVT+ +L+ G + +L + M E
Sbjct: 423 LLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEAR 482
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+ YN+L+ L + + D A ++F +M ++ T+N +L GL + A
Sbjct: 483 IQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAF 542
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
+ +++ P+ VT ++L++ L + G + +++ + G A
Sbjct: 543 ELMDQMKEERCTPDYVTMDVLMEWLPEIGETERLKCFMEQRDEKGGA 589
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 187/416 (44%), Gaps = 26/416 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGA------TRNSLLSCSLDLLD 55
L+ +YC + Y +L RM + G P V YN I LL+ + + +
Sbjct: 183 LVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYE 242
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
EML + + + CL +GK D A ++ + M+ P T+T++ ++ LC+
Sbjct: 243 EMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAM 302
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
+ A +F+ ++ G P++ TY ILI CKAG + AR E+ G + N +TYT
Sbjct: 303 KVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYT 362
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD-------- 227
++ + ++ +I + M G + Y ++ K G +++A +
Sbjct: 363 ALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGT 422
Query: 228 --------YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
Y E TD + ++V+Y LI+ CK K+ A LLD M G E + +
Sbjct: 423 SDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIY 482
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----E 335
LIDG CK G I A+ M+K G+ + Y ++D + KD ++D A+ V E
Sbjct: 483 DALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVE 542
Query: 336 SMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
S + TY++M+ LC+ A KLL + G A++DGL SG
Sbjct: 543 SSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSG 598
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 181/384 (47%), Gaps = 22/384 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID++C+ + + + MR G S +VVTY +L+ + L + D+ + M++
Sbjct: 328 ILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDA 387
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI----------------CGDLTPCTATF 104
G PP+ +Y++L+ L + G+ +A V+ +I + P T+
Sbjct: 388 GCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTY 447
Query: 105 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 164
+++GLCK +A + + +G P + Y+ LI G CK G++ A+ + +
Sbjct: 448 GALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSK 507
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
G+ P TYT+++ F++R+ L +++LS M T + Y +I +IG ++
Sbjct: 508 CGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQK 567
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A + M G ++V+Y LI+ K GK++ + L +M +G + T+ +LI+
Sbjct: 568 ALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLIN 627
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VK 340
C AG + A L M + + L+ Y +V K K ++ + E +E V
Sbjct: 628 HCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSK--KFIASLGLLEELESHGTVP 685
Query: 341 DSFTYSSMVHNLCKAKRLPSASKL 364
+ Y ++ N KA RL A +L
Sbjct: 686 IAPVYGLLIDNFSKAGRLEEALEL 709
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 188/424 (44%), Gaps = 26/424 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C+ + + + + M+ G++PDV TY LI + L+ + DEM +G
Sbjct: 294 VITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIG 353
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+V +Y +L+H + + +A+ +F MI P T T++ +++GLCK A
Sbjct: 354 CSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKAC 413
Query: 122 RM----------------FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
+ F G P +VTY LI GLCKA ++ A+ +L + +
Sbjct: 414 EVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSN 473
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
G PN I Y ++ + K E+ M + GY Y ++I A K RL A
Sbjct: 474 GCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLA 533
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ QMV ++V+Y +I+ C+ G+ + A LL ME++G + T+T LIDG
Sbjct: 534 MKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDG 593
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT- 344
L K+G + + M+ G N Y +++ G +D A ++ E+K ++
Sbjct: 594 LGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLS--EMKQTYWP 651
Query: 345 -----YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
Y S+V +K+ ++ LL G + ++D +G EA ++
Sbjct: 652 KYLQGYCSVVQGF--SKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALEL 709
Query: 400 QSKI 403
++
Sbjct: 710 HKEM 713
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 158/339 (46%), Gaps = 5/339 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ +L+ M G P+ + Y++LI G + + + ++ M + G
Sbjct: 450 LIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCG 509
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y SL+ +F+ + D A +V M+ TP T+ M++GLC+ AL
Sbjct: 510 YLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKAL 569
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ +++ G P +VTY LI GL K+G++ + + ++ G APN +TY ++ C
Sbjct: 570 KLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHC 629
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+LS MK+ + GYC+V+ F K + + +E++ + G
Sbjct: 630 CAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSK--KFIASLGLLEELESHGTVPIA 687
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD---KYTHTILIDGLCKAGNIKGARLH 298
Y LI+ + K G+LE A L EM + + K +T LI LC A ++ A
Sbjct: 688 PVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFEL 747
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
+ + G L + C++ L K K + A+ + S+
Sbjct: 748 YSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSI 786
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 179/412 (43%), Gaps = 37/412 (8%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
FD + L+RMR P+VVTY +L+ G + L +++ M++ G P+ +NS
Sbjct: 123 FDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNS 182
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN------ALRMFR 125
L+H A ++ + M P +NI + +C + A +++
Sbjct: 183 LVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYE 242
Query: 126 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 185
+ V V + LC G+ A I+K + G P+ TY+ ++
Sbjct: 243 EMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAM 302
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
K + + MK G D + Y +I +F K G +++A + ++M + G ++V+Y
Sbjct: 303 KVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYT 362
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
L++ Y K +L A + + M G + T++ L+DGLCKAG I+ A
Sbjct: 363 ALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKA---------- 412
Query: 306 GFDSNLEAYNCIV---DRLGKD----GKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRL 358
E Y ++ D +G D GK +I + TY +++ LCKA ++
Sbjct: 413 -----CEVYTKLIGTSDNVGSDFYFEGKHTDSI-------APNVVTYGALIDGLCKAHKV 460
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
A +LL + L +G A++DG G A+++ +RM+K +
Sbjct: 461 VDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEV--FLRMSKCGY 510
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 154/395 (38%), Gaps = 46/395 (11%)
Query: 14 AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 73
+ +T +++ G P TYN+L+ + + EM E G D ++
Sbjct: 23 SSHTADPELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFA 82
Query: 74 HCLFQLGKP--------------------------------DEANRVFQDMICGDLTPCT 101
L + G+ DEA M C P
Sbjct: 83 QALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNV 142
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
T+ +L G K + R+ + K G P +N L+ C A A +LK
Sbjct: 143 VTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKR 202
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV----IAAFV 217
+ D G P + Y + +L L A+ K Y C + A F
Sbjct: 203 MADCGCPPGYVAYNIFIGSICGGE--ELPSPDLLALAEKVYEEMLASSCVLNKVNTANFA 260
Query: 218 K----IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ +G+ A ++ M+ G D +Y+ +I C+ K+E A+LL EM+ G
Sbjct: 261 RCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVN 320
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
D YT+TILID CKAG I+ AR + M IG +N+ Y ++ K ++ A ++
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDI 380
Query: 334 FESME----VKDSFTYSSMVHNLCKAKRLPSASKL 364
F M ++ TYS++V LCKA + A ++
Sbjct: 381 FNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEV 415
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 115/272 (42%), Gaps = 36/272 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LIDA + D +L++M E+ +P+VVTY ++I G R +L LL M E G
Sbjct: 520 LIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKG 579
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA- 120
P+V +Y +L+ L + GK D + ++F M P T+ +++N C D A
Sbjct: 580 CSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAH 639
Query: 121 --------------------------------LRMFRGLQKHGFVPELVTYNILIKGLCK 148
L + L+ HG VP Y +LI K
Sbjct: 640 SLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSK 699
Query: 149 AGRLRTARWILKELGDSGHAPNAIT---YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
AGRL A + KE+ + + N + YT++++ + + E+ S + RKG +
Sbjct: 700 AGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPE 759
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ +I +K+ + EA + +GV
Sbjct: 760 LSVFVCLIKGLIKVNKWNEALQLCYSICDEGV 791
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 150/382 (39%), Gaps = 77/382 (20%)
Query: 99 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 158
P AT+N ++ L D R+ + + + GF + T + LCK GR A +
Sbjct: 38 PSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALVM 97
Query: 159 LK---------------------ELGDSGHA-----------PNAITYTTIMKCCFRNRK 186
++ L D + PN +TY T++ + ++
Sbjct: 98 IEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQ 157
Query: 187 YKLGLEILSAMKRKGYT-----FDGF--GYCTV----------------------IAAFV 217
I++ M ++G F+ YC +A +
Sbjct: 158 LGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNI 217
Query: 218 KIGR------------LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
IG L A E+M+ L+ V+ C GK + A+ ++
Sbjct: 218 FIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIK 277
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M +GF D T++ +I LC+A ++ A L + M +G + ++ Y ++D K G
Sbjct: 278 VMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAG 337
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
I+ A + F+ M + TY++++H KAK+LP AS + + +G
Sbjct: 338 LIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYS 397
Query: 382 AVVDGLRHSGCRREAKKIQSKI 403
A+VDGL +G ++A ++ +K+
Sbjct: 398 ALVDGLCKAGEIQKACEVYTKL 419
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C D +++L+ M++ + Y S++ G ++ + SL LL+E+
Sbjct: 624 VLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFI--ASLGLLEELESH 681
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI--------MLNGLC 112
G P Y L+ + G+ +EA + ++M+ +++ NI ++ LC
Sbjct: 682 GTVPIAPVYGLLIDNFSKAGRLEEALELHKEMM-----ELSSSLNITSKDMYTSLIQALC 736
Query: 113 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+ A ++ + + G VPEL + LIKGL K + A + + D G
Sbjct: 737 LASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEG 790
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 194/410 (47%), Gaps = 36/410 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++A C+ F +L+ MR G +P++VTYN +I G R + + ++L+ +
Sbjct: 192 VLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSY 251
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ SY +++ L + D+ +F +M+ P TF++++ C+ + A
Sbjct: 252 GFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERA 311
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + + +HG P NI+I +CK GR+ A L +G G P+ I+YTT+++
Sbjct: 312 IQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRG 371
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R +++ E+L M RK + + T I + G +++A +E M G +
Sbjct: 372 LCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVG 431
Query: 241 IVSYNTLINLYCKEG--------------------------------KLEAAYLLLDEME 268
IV+YN L++ +C +G +L+AA LL EM
Sbjct: 432 IVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMI 491
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
++ + T +L+ C+ G ++ A + M + G NL +N ++D + KD +
Sbjct: 492 QKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSE 551
Query: 329 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
A+ + + K D+ TYSS+V L + R A ++L + G+R
Sbjct: 552 EALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMR 601
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 175/358 (48%), Gaps = 5/358 (1%)
Query: 13 DAGYTILNRMREAGISP----DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 68
D T + R A P T +GA+ + S + ML+ G P V +
Sbjct: 130 DTAATAASTPRAASSPPCPSRPTPTPTRPSSGASATAEGSATRSPCSTMLQRGCQPSVVT 189
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
Y L+ + + EA V +M TP T+N+++NG+C+ D+A + L
Sbjct: 190 YTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLS 249
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
+GF P++V+Y ++KGLC A R + + E+ D PN +T+ +++ R +
Sbjct: 250 SYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVE 309
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
+++L M + G T + VI A K GR+ +A D++ M G D +SY T++
Sbjct: 310 RAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVL 369
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
C+ G+ E A LL EM ++ ++ T I LC+ G I+ A +E M + G
Sbjct: 370 RGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCS 429
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLL 365
+ YN +V G++D A+ +F ++ + ++ TY++++ LC A+RL +A++LL
Sbjct: 430 VGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELL 487
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 161/346 (46%), Gaps = 3/346 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+A C+ D Y LN M G +PD ++Y +++ G R + +LL EM+
Sbjct: 332 IVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRK 391
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PP+ ++N+ + L Q G ++A ++ + M + T+N +++G C D+A
Sbjct: 392 NCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSA 451
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F L P +TY L+ GLC A RL A +L E+ NA+T+ ++
Sbjct: 452 LELFNNLPCE---PNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSF 508
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + +E+++ M G T + + T++ K +EA + + +V+ GV LD
Sbjct: 509 FCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLD 568
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++Y++++++ +E + E A +L ++ G + ++ LCK A
Sbjct: 569 TITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFA 628
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYS 346
YM G N Y +++ L +G + A V + K + S
Sbjct: 629 YMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVLSKS 674
>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 412
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 187/389 (48%), Gaps = 24/389 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG---ATRNSLLSCSL------ 51
+L + C G + + G PD+VTYN+LI G R S+ +C +
Sbjct: 15 ILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVATCIIIDGLCK 74
Query: 52 --------DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT 103
++ +EM G+ P+V SY+SL+H GK +E+ R+F +M+ + P
Sbjct: 75 VGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQ 134
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
FN++++ LCK A ++ + G + +LVTYN LI G CK G L +AR + +
Sbjct: 135 FNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMP 194
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
G N I+YT ++ + K + + + + M + G + Y T++ ++ G++
Sbjct: 195 SKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVG 254
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
+A M G+ +D Y ++ CK G L A L +E++ F+ D +++ LI
Sbjct: 255 DANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLI 314
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----- 338
DGLCKAG ++ A + +++ G N+ N ++ + ++D A +FE ME
Sbjct: 315 DGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEEN 374
Query: 339 --VKDSFTYSSMVHNLCKAKRLPSASKLL 365
D TY++++ C++ +L LL
Sbjct: 375 GCTPDIITYNTLLRGFCESNKLEEVVNLL 403
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 164/340 (48%), Gaps = 3/340 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ D I M+ G+ P+V++Y+SL+ G L S L +EM++
Sbjct: 67 IIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQ 126
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P++ +N L+ L + GK EA ++ + I + T+N +++G CK +A
Sbjct: 127 GVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSA 186
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F + G ++Y ILI G CK ++ A + E+ G PN TY+T++
Sbjct: 187 RKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTG 246
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K ++ MK G + D Y + K G L EA + ++ + +LD
Sbjct: 247 LLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLD 306
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
SY+ LI+ CK GK+E A+ ++ ++G + + T I+I G C+ + A + E
Sbjct: 307 FESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFE 366
Query: 301 YMNKI---GFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M K+ G ++ YN ++ + K++ +N+ M
Sbjct: 367 KMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 406
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 174/378 (46%), Gaps = 26/378 (6%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M AG+SPD+ T N L + +S L + +L G PD+ +YN+L+ L ++ +
Sbjct: 1 MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHR 60
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
A C I+++GLCK + D A +F ++ G +P +++Y+
Sbjct: 61 ISVAT-------------C-----IIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSS 102
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
L+ G C AG+L ++ + E+ D G PN + + ++ + K ++L ++G
Sbjct: 103 LVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRG 162
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
D Y ++I F KIG L A M + G + + +SY LIN YCK K+E A
Sbjct: 163 IILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAM 222
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
L +EM + G + T++ L+ GL + G + A M G + Y +D L
Sbjct: 223 NLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGL 282
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
K+G + A+ +F ++ D +YS ++ LCKA ++ A + + G++
Sbjct: 283 CKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQ--- 339
Query: 378 SAQKAVVDGLRHSGCRRE 395
+ + H CR E
Sbjct: 340 -PNVVTCNIMIHGFCRVE 356
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 154/313 (49%), Gaps = 24/313 (7%)
Query: 97 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 156
L+P T NI+ N LC L G+ + G++P++VTYN LIKGLC+ R+ A
Sbjct: 6 LSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVAT 65
Query: 157 WILKE-LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 215
I+ + L GH A EI MK +G + Y +++
Sbjct: 66 CIIIDGLCKVGHEDEA-------------------KEIFEEMKAQGMIPNVISYSSLVHG 106
Query: 216 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
F G+L+E+ +MV GVQ ++V +N LI++ CKEGK+ A LL+ ++G D
Sbjct: 107 FCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILD 166
Query: 276 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
T+ LIDG CK G++ AR M G + N +Y +++ K K++ A+N++
Sbjct: 167 LVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYN 226
Query: 336 SM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
M + + TYS+++ L + ++ A+KL SG+ + +DGL +G
Sbjct: 227 EMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNG 286
Query: 392 CRREAKKIQSKIR 404
EA ++ ++++
Sbjct: 287 VLFEAMELFNELK 299
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 129/269 (47%), Gaps = 32/269 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ + + M G + ++Y LI G + + +++L +EM ++G
Sbjct: 173 LIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVG 232
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +Y++L+ L Q GK +AN++F M ++ + + I L+GLCKN A+
Sbjct: 233 KRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAM 292
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F L+ + F + +Y+ LI GLCKAG++ A K+L G PN +T ++
Sbjct: 293 ELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIH-- 350
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
G+C V ++ + + ME+M +G DI
Sbjct: 351 --------------------------GFCRV----EQVDKANILFEKMEKMEENGCTPDI 380
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
++YNTL+ +C+ KLE LL +M K+
Sbjct: 381 ITYNTLLRGFCESNKLEEVVNLLHKMFKR 409
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 22/168 (13%)
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G+ D+ + N L N C ++ + + ++G+ D T+ LI GLC+ I A
Sbjct: 5 GLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVA 64
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 351
I+D L K G D A +FE M+ + + +YSS+VH
Sbjct: 65 TC------------------IIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHG 106
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
C A +L + +L + GV+ ++D L G EAKK+
Sbjct: 107 FCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKL 154
>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
duartei]
Length = 412
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 150/285 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV+YN+L+ G R L L ML
Sbjct: 128 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLAS 187
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN +F +M+ L P TF +++G CKN D A
Sbjct: 188 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 247
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + P+L+TYN LI GLCK G L+ A ++ E+ G P+ ITYTT++
Sbjct: 248 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLING 307
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + E M ++ D Y +I+ + GR +A + +M++ G++ D
Sbjct: 308 CCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLKPD 367
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y +IN +CK G + LL EM++ G T+ +L++G
Sbjct: 368 ARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVLMNG 412
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 153/308 (49%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ ++ + + + D + + G+ P V SYN+
Sbjct: 104 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 163
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ + G DE + M+ + P T+++++NGLCK D+A +F + G
Sbjct: 164 LMNGYIRXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 223
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP VT+ LI G CK GR+ A I K++ +P+ ITY T++ + K
Sbjct: 224 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAH 283
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
++ M KG D Y T+I K G L A ++ ++M+ + ++LD V+Y LI+
Sbjct: 284 HLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGX 343
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
C+EG+ A +L EM G + D T+T++I+ CK G++ L+ M + G ++
Sbjct: 344 CQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSV 403
Query: 312 EAYNCIVD 319
YN +++
Sbjct: 404 VTYNVLMN 411
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 145/298 (48%), Gaps = 1/298 (0%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E+LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 112 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRX 171
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D + + G P++ TY++LI GLCK ++ A + E+ G PN +T+
Sbjct: 172 GDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 231
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A +++M
Sbjct: 232 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSV 291
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLIN CKEG L++A+ M ++ D+ +T LI G C+ G
Sbjct: 292 KGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVD 351
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
A L M +G + Y I++ K G + + + M+ +D S + +N+
Sbjct: 352 AEKMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQ-RDGHVPSVVTYNV 408
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 128/272 (47%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y + + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 94 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 153
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ ++Y T+M R G + S M G D + Y +I K ++ +A
Sbjct: 154 LRPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDAN 213
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ + V++ TLI+ +CK G+++ A + +M Q D T+ LI GL
Sbjct: 214 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 273
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K A ++ M+ G + Y +++ K+G +D A + M + D
Sbjct: 274 CKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDE 333
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ C+ R A K+L L G++
Sbjct: 334 VAYTALISGXCQEGRSVDAEKMLREMLSVGLK 365
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 197/424 (46%), Gaps = 41/424 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C+ Y +L +M E I P+V TY L+ G R++ + ++ EM G
Sbjct: 94 IITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNG 153
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y +L+ L + G+ DEA RV + +L T ++ GLCK D+AL
Sbjct: 154 CKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDAL 213
Query: 122 RMFRGLQKHGFVPELVTYNILIKG------------------------------------ 145
+ +++ G P VTY+ L+ G
Sbjct: 214 KFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDA 273
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCKAG L AR ++EL SG P+ +TY+ ++ R ++ LE+L M+R G D
Sbjct: 274 LCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPD 333
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y T+I K + ++A +E M G ++V+YN++++ CK GK++ + + +
Sbjct: 334 VVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYE 393
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M K D T++I+++GL KAG + A E + + AY+ ++ L + G
Sbjct: 394 MMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAG 453
Query: 326 KIDHAINVFESMEVK---DSF--TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
K++ A ++ MEV D+ + +V LC A+R SA +++ + G R+ KS
Sbjct: 454 KLEEACGMYHGMEVTVAGDNICRALAGLVAALCDAERTDSARRIVEVASERGHRMTKSGD 513
Query: 381 KAVV 384
+V
Sbjct: 514 TDLV 517
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 173/343 (50%), Gaps = 5/343 (1%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
+P + YN +I G R S + + +L++M+E I P+V++Y L++ L + K A
Sbjct: 85 TPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLARE 144
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
VFQ+M P T+ ++ L + D ALR+ + +++T ++ GLC
Sbjct: 145 VFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLC 204
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK-RKGYTFDG 206
KA RL A ++E+ G PN +TY+ ++ ++ + + K RKG + +
Sbjct: 205 KASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEA 264
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y + A K G L A +E++ GV D+V+Y+ LIN + + G+ +A+ LL++
Sbjct: 265 AAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLED 324
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M + G + D T++ LI+ LCK + A LE M G N+ YN ++D L K GK
Sbjct: 325 MRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGK 384
Query: 327 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
+D V+E M D TYS +++ L KA L SA KL
Sbjct: 385 MDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLF 427
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 175/383 (45%), Gaps = 41/383 (10%)
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
++E G+ D ++ L LF+ K E R+F + + T+ ++++GLC
Sbjct: 10 VVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGM 69
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
+ AL + R L + P L YN +I GLC+A R+ A +L+++ + PN TYT
Sbjct: 70 ANQALELVRELSGV-YTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTI 128
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ R+ K KL E+ MKR G + Y T+I + G + EA M + +
Sbjct: 129 LLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLE 188
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI------------- 283
+ D+++ T++ CK +L+ A ++EM + G ++ T++ L+
Sbjct: 189 LPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVI 248
Query: 284 -----------------------DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
D LCKAG + AR +E + + G ++ Y+ +++
Sbjct: 249 RFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINT 308
Query: 321 LGKDGKIDHAINVFESME---VK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
+ G+ D ++ + E M VK D TYS++++ LCK ++ A +LL +G
Sbjct: 309 FARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPN 368
Query: 377 KSAQKAVVDGLRHSGCRREAKKI 399
+V+DGL SG E ++
Sbjct: 369 VVTYNSVMDGLCKSGKMDEVHRV 391
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 91/155 (58%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLI+ + + FDA +L MR G+ PDVVTY++LI + + LL+ M
Sbjct: 304 MLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAA 363
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PP+V +YNS+M L + GK DE +RV++ M+ +P T++I++NGL K D+A
Sbjct: 364 GSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSA 423
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 155
+++F ++ P+ Y+++I LC+AG+L A
Sbjct: 424 VKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEA 458
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 84/187 (44%), Gaps = 10/187 (5%)
Query: 225 ATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A +E+ V + GV++D ++ L + K L + +G + T+ +++
Sbjct: 2 AAKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVV 61
Query: 284 DGLCKAGNIKGARLHLEYMNKIG--FDSNLEAYNCIVDRLGKDGKIDHAINVFESME--- 338
DGLC AG A LE + ++ + L YN I+ L + ++ A V E M
Sbjct: 62 DGLCGAGMANQA---LELVRELSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEES 118
Query: 339 -VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
V + FTY+ +++ LC++ + A ++ ++G + ++ L +G EA
Sbjct: 119 IVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEAL 178
Query: 398 KIQSKIR 404
++ + R
Sbjct: 179 RVMIEQR 185
>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
Length = 676
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 176/368 (47%), Gaps = 5/368 (1%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
CQ F+ +L M G S D T ++ R L M+EMG PP+V
Sbjct: 192 CQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNV 251
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
+Y + + L + G +A V ++M+ L P T +++GLCK +T+ A R+F
Sbjct: 252 VNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLK 311
Query: 127 LQK-HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 185
L K + P + TY ++I G CK G+L A +L + + G APN TYTT++ R
Sbjct: 312 LVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGG 371
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
+ E+++ MK +G+ + + Y +I F K G++++A + + G+ D V+Y
Sbjct: 372 SFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYT 431
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
LI +CK+G + A L ++M + D T+T +I C+ ++ ++ + I
Sbjct: 432 MLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSI 491
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 361
G + Y ++ + GK A+ VFE M + D TY +++ LCK RL A
Sbjct: 492 GLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEA 551
Query: 362 SKLLLSCL 369
L + L
Sbjct: 552 RALFETML 559
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 158/338 (46%), Gaps = 1/338 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ A+C+ F + RM E G P+VV Y + + G + + + +L+EM+
Sbjct: 221 VVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGK 280
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDN 119
G+ P+V+++ SL+ L ++G + A R+F ++ P T+ +M+ G CK
Sbjct: 281 GLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLAR 340
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + + + G P TY LI G C+ G A ++ ++ G PN TY I+
Sbjct: 341 AEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIG 400
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ K + ++L +G D Y +I K G + A D QM +
Sbjct: 401 GFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHP 460
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DI +Y T+I +YC++ ++E + L D+ G K T+T +I G C+ G A
Sbjct: 461 DIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVF 520
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
E M + G + Y ++ L K+ +++ A +FE+M
Sbjct: 521 ERMVQHGCLPDPITYGALISGLCKESRLEEARALFETM 558
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 171/352 (48%), Gaps = 11/352 (3%)
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
MG+ PD S+ +L+ Q G+ +EA+ + M + +AT +++ C+ +
Sbjct: 175 MGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRD 234
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM- 178
+F + + G P +V Y + GLCK G ++ A +L+E+ G PN T+T+++
Sbjct: 235 VPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLID 294
Query: 179 ---KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
K + R ++L L+++ K Y + Y +I + K G+L A + +MV
Sbjct: 295 GLCKIGWTERAFRLFLKLV---KSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQ 351
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G+ + +Y TLI+ +C+ G + A+ L+++M+ +GF + YT+ +I G CK G I+ A
Sbjct: 352 GLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQA 411
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHN 351
L G + Y ++ K G I +A+++F M D TY++++
Sbjct: 412 YKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAM 471
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
C+ +++ + +L CL G+ K +++ G G A K+ ++
Sbjct: 472 YCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERM 523
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 160/369 (43%), Gaps = 44/369 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I YC+ +L RM E G++P+ TY +LI G R + +L+++M
Sbjct: 327 VMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLE 386
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P++++YN+++ + GK +A +V + L P T+ +++ CK + A
Sbjct: 387 GFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYA 446
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F + ++ P++ TY +I C+ ++ ++ + + G P TYT+++
Sbjct: 447 LDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIA- 505
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
GYC ++G+ A E+MV G D
Sbjct: 506 ---------------------------GYC-------RVGKSTSALKVFERMVQHGCLPD 531
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
++Y LI+ CKE +LE A L + M +K CD T L C+ A L
Sbjct: 532 PITYGALISGLCKESRLEEARALFETMLDKHMVPCD-VTCVTLAYEYCRRDKTTIAVSFL 590
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI----NVFESMEVKDSFTYSSMVHNLCKA 355
+ ++K A + +V +L +D A NV + D TY+S +++ ++
Sbjct: 591 DGLDK---RQQAHAADALVRKLSAVDNLDAASLFLKNVLDKHYAVDHATYTSFINSCYES 647
Query: 356 KRLPSASKL 364
R AS++
Sbjct: 648 NRYALASEI 656
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 140/294 (47%), Gaps = 12/294 (4%)
Query: 119 NALRMFRGLQKHGFVPELVTYNILIK-GLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
A M L+ HG + T N +++ GL + AR +G P+A ++ +
Sbjct: 131 EATDMLLELRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFDGMGVR---PDARSFRAL 187
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ C + +++ +L+AM R+G++ D V+ AF + GR ++ +MV G
Sbjct: 188 VLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGN 247
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-R 296
++V+Y ++ CK G ++ A+ +L+EM +G + + YTHT LIDGLCK G + A R
Sbjct: 248 PPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFR 307
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI----NVFESMEVKDSFTYSSMVHNL 352
L L+ + + N+ Y ++ K+GK+ A + E ++ TY++++
Sbjct: 308 LFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGH 367
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
C+ A +L+ G A++ G G ++A K+ +RMA
Sbjct: 368 CRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKV---LRMA 418
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 3/199 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I YCQ + + ++ G+ P TY S+IAG R + +L + + M++ G
Sbjct: 468 IIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHG 527
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +Y +L+ L + + +EA +F+ M+ + PC T + C+ T A+
Sbjct: 528 CLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAV 587
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
GL K + + L++ L L A LK + D +A + TYT+ + C
Sbjct: 588 SFLDGLDKR---QQAHAADALVRKLSAVDNLDAASLFLKNVLDKHYAVDHATYTSFINSC 644
Query: 182 FRNRKYKLGLEILSAMKRK 200
+ + +Y L EI + ++
Sbjct: 645 YESNRYALASEISEKISKR 663
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 169/355 (47%), Gaps = 4/355 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+AY + F +L M++ G+ + VTY L+ + +N +S + L DEM E G
Sbjct: 265 IINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERG 324
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I DV Y SL+ + G A +F ++ L+P + T+ +++G+CK A
Sbjct: 325 IESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAE 384
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ +Q G V +N LI G C+ G + A I + G + T TI C
Sbjct: 385 ILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCF 444
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R ++Y + L M G Y +I + K G ++EA +M + GVQ +
Sbjct: 445 NRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNA 504
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN +I YCK+GK++ A L ME G + D YT+T LI G C A N+ A
Sbjct: 505 ITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSE 564
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
M G D N Y ++ L K GK D A +++ M+ K D+ Y++++ ++
Sbjct: 565 MGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 177/394 (44%), Gaps = 5/394 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++ C+ + ++ GI P+ TYN++I + S +L M +
Sbjct: 229 IVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKD 288
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + +Y LM + GK +A ++F +M + + +++ C+ A
Sbjct: 289 GVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRA 348
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F L + G P TY LI G+CK G + A ++ E+ G + + T++
Sbjct: 349 FLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDG 408
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R I M++KG+ D F T+ + F ++ R EA ++ +M+ GV+L
Sbjct: 409 YCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLS 468
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
VSY LI++YCKEG +E A L EM +G + + T+ ++I CK G IK AR
Sbjct: 469 TVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRA 528
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G D + Y ++ +D A+ +F M +K +S TY+ M+ L KA
Sbjct: 529 NMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAG 588
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
+ A L + G I A++ G HS
Sbjct: 589 KSDEAFGLYDEMKRKGYTIDNKVYTALI-GSMHS 621
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 163/325 (50%), Gaps = 6/325 (1%)
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
G +E RVF M+ L+ + + L K R D L +FR + G + +
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE-ILSAMK 198
I+++GLC+ G + ++ ++KE G P A TY TI+ + R + G+E +L MK
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFS-GVEGVLKVMK 286
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
+ G ++ Y ++ VK G++ +A ++M G++ D+ Y +LI+ C++G ++
Sbjct: 287 KDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMK 346
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A+LL DE+ ++G YT+ LIDG+CK G + A + + M G + +N ++
Sbjct: 347 RAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLI 406
Query: 319 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
D + G +D A +++ ME K D FT +++ + KR A + L ++ GV+
Sbjct: 407 DGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVK 466
Query: 375 ILKSAQKAVVDGLRHSGCRREAKKI 399
+ + ++D G EAK++
Sbjct: 467 LSTVSYTNLIDVYCKEGNVEEAKRL 491
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 187/424 (44%), Gaps = 39/424 (9%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F+ G + + M + G+S D + + A + + L++ M++ G+ V+S
Sbjct: 170 FEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTI 229
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
++ L + G+ +++ ++ ++ + P T+N ++N K R + + ++K G
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG 289
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
V VTY +L++ K G++ A + E+ + G + YT+++ R K
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAF 349
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+ + KG + + Y +I K+G + A M +M + GV + V +NTLI+ Y
Sbjct: 350 LLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGY 409
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYT--------------------------------- 278
C++G ++ A ++ D ME++GF+ D +T
Sbjct: 410 CRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLST 469
Query: 279 --HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
+T LID CK GN++ A+ M+ G N YN ++ K GKI A + +
Sbjct: 470 VSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRAN 529
Query: 337 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 392
ME DS+TY+S++H C A + A +L G+ ++ GL +G
Sbjct: 530 MEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGK 589
Query: 393 RREA 396
EA
Sbjct: 590 SDEA 593
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 177/351 (50%), Gaps = 14/351 (3%)
Query: 34 YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
+NSLI L S+ L M + + P V ++NSLM L + G+ + A V+ +M+
Sbjct: 151 FNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEML 210
Query: 94 -CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
++P T T+N+++ G CKN D R FR ++ ++VTYN L+ GLC+AG++
Sbjct: 211 GTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKV 270
Query: 153 RTARWILKELGD--SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
R AR ++ +G G PN +TYTT+++ ++ + L +L M +G + Y
Sbjct: 271 RIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYN 330
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
T++ + +L + D +E+M +D G D ++NT+I+L+C G L+ A + + M+K
Sbjct: 331 TLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKK 390
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLE-------YMNKIGFDSNLEAYNCIVDRLG 322
D +++ LI LC+ G+ A + ++K G +YN I + L
Sbjct: 391 FRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLC 450
Query: 323 KDGKIDHAINVFESME---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
+ GK A V + +D +Y++++ CK S +LL+ L+
Sbjct: 451 EHGKTKKAERVIRQLMKRGTQDPQSYTTVIMGHCKEGAYESGYELLMWMLR 501
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 183/410 (44%), Gaps = 16/410 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-EM 60
LI +Y + F + M+ +SP VVT+NSL++ + + + ++ DEML
Sbjct: 154 LIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTY 213
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD +YN L+ + DE R F++M + T+N +++GLC+ A
Sbjct: 214 GVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIA 273
Query: 121 LRMFRGLQK--HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
+ G+ K G P +VTY LI+G C + A +L+E+ G PN ITY T++
Sbjct: 274 RNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLV 333
Query: 179 KCCFRNRKYKLGLEILSAMKRK-GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
K K ++L MK G++ D F + T+I G L EA E M +
Sbjct: 334 KGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRI 393
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY-------THTILIDGLCKAG 290
D SY+TLI C++G + A L DE+ ++ K+ ++ + + LC+ G
Sbjct: 394 PADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHG 453
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT----YS 346
K A + + K G + ++Y ++ K+G + + M +D Y
Sbjct: 454 KTKKAERVIRQLMKRG-TQDPQSYTTVIMGHCKEGAYESGYELLMWMLRRDFLPDIEIYD 512
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
++ + + A + L LKS + S +V+ L GC E+
Sbjct: 513 YLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKLLEKGCAHES 562
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 171/366 (46%), Gaps = 21/366 (5%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G+SPD TYN LI G +NS++ EM DV +YN+L+ L + GK A
Sbjct: 214 GVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIA 273
Query: 86 NRVFQDM--ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+ M C L P T+ ++ G C + + AL + + G P ++TYN L+
Sbjct: 274 RNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLV 333
Query: 144 KGLCKAGRLRTARWILKEL-GDSGHAPNAITYTTI--MKCCFRNRKYKLGLEILSAMKRK 200
KGLC+A +L + +L+ + D G +P+ T+ TI + CC N L++ +MK+
Sbjct: 334 KGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGN--LDEALKVFESMKKF 391
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD-------IVSYNTLINLYCK 253
D Y T+I + + G A +++ + L SYN + C+
Sbjct: 392 RIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCE 451
Query: 254 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
GK + A ++ ++ K+G + D ++T +I G CK G + L +M + F ++E
Sbjct: 452 HGKTKKAERVIRQLMKRGTQ-DPQSYTTVIMGHCKEGAYESGYELLMWMLRRDFLPDIEI 510
Query: 314 YNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLLLSC 368
Y+ ++D + K A E M +K S+ T+ S++ L + +S +++
Sbjct: 511 YDYLIDGFLQKDKPLLAKETLEKM-LKSSYQPKTSTWHSVLAKLLEKGCAHESSCVIVMM 569
Query: 369 LKSGVR 374
L+ VR
Sbjct: 570 LEKNVR 575
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 159/337 (47%), Gaps = 15/337 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C+ D G+ M DVVTYN+L+ G R + + +L++ M +
Sbjct: 224 VLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKK 283
Query: 61 --GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
G+ P+V +Y +L+ +C+ Q + +EA V ++M L P T+N ++ GLC+
Sbjct: 284 CEGLNPNVVTYTTLIRGYCMKQ--EVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHK 341
Query: 117 TDNALRMFRGLQKH-GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D + ++ GF P+ T+N +I C AG L A + + + ++ +Y+
Sbjct: 342 LDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYS 401
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI-------GRLKEATDY 228
T+++ + Y + ++ + K FG + A++ I G+ K+A
Sbjct: 402 TLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERV 461
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+ Q++ G Q D SY T+I +CKEG E+ Y LL M ++ F D + LIDG +
Sbjct: 462 IRQLMKRGTQ-DPQSYTTVIMGHCKEGAYESGYELLMWMLRRDFLPDIEIYDYLIDGFLQ 520
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
A+ LE M K + ++ ++ +L + G
Sbjct: 521 KDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKLLEKG 557
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 126/297 (42%), Gaps = 46/297 (15%)
Query: 120 ALRMFRGLQKHGF--VPELV------------------------------------TYNI 141
ALR F+ Q+ GF PE +N
Sbjct: 94 ALRFFKWTQQKGFSHTPESYFIMLEILGRERNLNVARNFLFSIEKHSKGTVKLEDRFFNS 153
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM-KRK 200
LI+ +AG + + + + + +P+ +T+ ++M + + + E+ M
Sbjct: 154 LIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTY 213
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G + D Y +I F K + E + +M + D+V+YNTL++ C+ GK+ A
Sbjct: 214 GVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIA 273
Query: 261 YLLLDEMEK--QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
L++ M K +G + T+T LI G C ++ A + LE M G N+ YN +V
Sbjct: 274 RNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLV 333
Query: 319 DRLGKDGKIDHAINVFESME-----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
L + K+D +V E M+ D+FT+++++H C A L A K+ S K
Sbjct: 334 KGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKK 390
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 148/381 (38%), Gaps = 86/381 (22%)
Query: 2 LIDAYCQFVSFDAGYTILNRMR-EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L+ C+ D +L RM+ + G SPD T+N++I L +L + + M +
Sbjct: 332 LVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKF 391
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL-------TPCTATFNIMLNGLCK 113
IP D SY++L+ L Q G D A ++F ++ ++ P A++N + LC+
Sbjct: 392 RIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCE 451
Query: 114 NRYTDNALRMFRGLQKHG----------------------------------FVPELVTY 139
+ T A R+ R L K G F+P++ Y
Sbjct: 452 HGKTKKAERVIRQLMKRGTQDPQSYTTVIMGHCKEGAYESGYELLMWMLRRDFLPDIEIY 511
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM-----KCC------------- 181
+ LI G + + A+ L+++ S + P T+ +++ K C
Sbjct: 512 DYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKLLEKGCAHESSCVIVMMLE 571
Query: 182 -----------------FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF-VKIGRLK 223
F +++ EI++ + + GY + +A F +K G+L
Sbjct: 572 KNVRQNINLSTESLQLLFGREQHERAFEIINLLYKNGY----YVKIEEVAQFLLKRGKLS 627
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
EA + + + +DI N I CK K+ A+ L E+ + G + +
Sbjct: 628 EACKLLLFSLENHQNVDIDLCNATILNLCKINKVSEAFSLCYELVENGL----HQELTCL 683
Query: 284 DGLCKAGNIKGARLHLEYMNK 304
D L A G R +++K
Sbjct: 684 DDLIAALEEGGKREEAAFISK 704
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 184/385 (47%), Gaps = 5/385 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP-PDVWSYNSLMHCLFQLGKPDEANR 87
PD T+N + L ++ +L M G P P+ +SYN ++ L++ G +A +
Sbjct: 150 PDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVK 209
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
+F +M + P T+N M++G K ++ R++ + +HG P ++TYN+L+ GLC
Sbjct: 210 LFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLC 269
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
+AGR+ +L E+ P+ TY+ + R + L + +KG +
Sbjct: 270 RAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAY 329
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
++ K G++ +A + ++ +V G+ V YNTLIN YC+ G LE A+ + +M
Sbjct: 330 TCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQM 389
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
+ + D T+ LI+GL K I A + M K G + ++E +N ++D G+ G++
Sbjct: 390 KSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQL 449
Query: 328 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
+ + M+ K + +Y S+V+ CK ++ A +L V A+
Sbjct: 450 EKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAI 509
Query: 384 VDGLRHSGCRREAKKIQSKIRMAKI 408
+D G +A + K++ + +
Sbjct: 510 IDAYIECGSTDQAFMLAEKMKSSGV 534
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 194/435 (44%), Gaps = 41/435 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID + + ++G+ + ++M G+ P+V+TYN L++G R + + +LDEM
Sbjct: 229 MIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRK 288
Query: 62 IPPDVWSYNSL------------MHCLFQL-----------------------GKPDEAN 86
+ PD ++Y+ L M LF+ GK +A
Sbjct: 289 MVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAE 348
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
V Q ++ L T +N ++NG C+ + A +F+ ++ P+ +TYN LI GL
Sbjct: 349 EVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGL 408
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
K R+ A ++ E+ +G P+ T+ T++ R + + ILS M+ KG +
Sbjct: 409 GKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNV 468
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +++ AF K G++ EA ++ M V YN +I+ Y + G + A++L ++
Sbjct: 469 VSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEK 528
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+ G T+ +LI GLCK I A L+ + G ++ +YN ++
Sbjct: 529 MKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSN 588
Query: 327 IDHAINVFESM---EVKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
D A+ + + M +K S TY + +L A R+ L L V
Sbjct: 589 TDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNI 648
Query: 383 VVDGLRHSGCRREAK 397
+VD ++ C E+K
Sbjct: 649 MVDA--YAKCGEESK 661
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 180/402 (44%), Gaps = 40/402 (9%)
Query: 12 FDAGYTILNRMR-EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
D +L RM + +P+ +YN +IAG + ++ L DEM E + P+ +YN
Sbjct: 168 LDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYN 227
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+++ + G + R++ M+ L P T+N++L+GLC+ + +
Sbjct: 228 TMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASR 287
Query: 131 GFVPELVTY-----------------------------------NILIKGLCKAGRLRTA 155
VP+ TY +IL+ GLCK G++ A
Sbjct: 288 KMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKA 347
Query: 156 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 215
+L+ L +SG + Y T++ + + I MK + D Y +I
Sbjct: 348 EEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALING 407
Query: 216 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
K+ R+ EA D + +M +GV + ++NTLI+ Y + G+LE +++L +M+++G + +
Sbjct: 408 LGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPN 467
Query: 276 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
++ +++ CK G I A L+ M + YN I+D + G D A + E
Sbjct: 468 VVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAE 527
Query: 336 SME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
M+ V S TY+ ++ LCK ++ A +LL S G+
Sbjct: 528 KMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGL 569
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 142/313 (45%), Gaps = 37/313 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL-------- 53
LI+ YCQ + ++I +M+ I PD +TYN+LI G + ++ + DL
Sbjct: 369 LINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNG 428
Query: 54 ---------------------------LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
L +M E G+ P+V SY S+++ + GK EA
Sbjct: 429 VNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAV 488
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ DM D+ P +N +++ + TD A + ++ G P +VTYN+LIKGL
Sbjct: 489 AILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGL 548
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFD 205
CK ++ A +L L + G AP+ I+Y T++ CC+R+ + LE+ M + G
Sbjct: 549 CKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDR-ALELEKEMWKCGIKPS 607
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y + ++ GR+ E + +QM+ V YN +++ Y K G+ L
Sbjct: 608 PRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRK 667
Query: 266 EMEKQGFECDKYT 278
EM +G YT
Sbjct: 668 EMSDKGIAVGDYT 680
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 2/179 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+IDAY + S D + + +M+ +G+ P +VTYN LI G + S +S + +LLD + G
Sbjct: 509 IIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYG 568
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV SYN+L+ D A + ++M + P T+ ++ + L
Sbjct: 569 LAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEME 628
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + VP YNI++ K G + KE+ D G A YT++ C
Sbjct: 629 NLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIAVG--DYTSMTNC 685
>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 191/427 (44%), Gaps = 75/427 (17%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M+ G+SP +T N ++ A + L+ + ++ DEM G+ PD S+ ++ F+ GK
Sbjct: 196 MQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGK 255
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
EA+R MI P AT ++L+ LC+N + A+ FR + GF P L+ +
Sbjct: 256 IQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 315
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM----KCCFRNRKYKLGLEIL--- 194
LI GLCK G ++ A +L+E+ +G PN T+T ++ K + + ++L L+++
Sbjct: 316 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 375
Query: 195 -----------------------------SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
S MK +G + Y T+I K G A
Sbjct: 376 IYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRA 435
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ M M +G + +I +YN +I+ CK+ + AY LL++ G E D T+TILI
Sbjct: 436 YELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 495
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNL---------------------------------- 311
CK +IK A MNK GF++++
Sbjct: 496 QCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPT 555
Query: 312 -EAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLL 366
E Y ++ K+G D A+ F +M+ V DSFTY S++ LCK + A KL
Sbjct: 556 KETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 615
Query: 367 SCLKSGV 373
+ + G+
Sbjct: 616 AMIDRGL 622
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 160/331 (48%), Gaps = 5/331 (1%)
Query: 47 LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 106
L+ ++ ++ +M G+ P + N ++ + G D A VF +M + P +++F +
Sbjct: 186 LNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKL 245
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
M+ G ++ A R G+ + GF+P+ T +++ LC+ G + A W +++ D G
Sbjct: 246 MVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLG 305
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
PN I +T+++ + K E+L M R G+ + + + +I K G ++A
Sbjct: 306 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAF 365
Query: 227 DYMEQMV-TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
++V +D + ++ +Y ++I YCKE KL A +L M++QG + T+T LI+G
Sbjct: 366 RLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLING 425
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV----FESMEVKD 341
CKAGN A + M+ GF N+ YN ++D L K + A + F D
Sbjct: 426 HCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEAD 485
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
TY+ ++ CK + A K+G
Sbjct: 486 GVTYTILIQEQCKQSDIKQALAFFCRMNKTG 516
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 155/313 (49%), Gaps = 5/313 (1%)
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
G+L ML + + A+ M +Q G P +T N +++ ++G +
Sbjct: 164 GNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDY 223
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
A + E+ G P++ ++ ++ CFR+ K + LS M ++G+ D +++
Sbjct: 224 AENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILS 283
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
A + G + A Y +M+ G + +++++ +LI+ CK+G ++ A+ +L+EM + G++
Sbjct: 284 ALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKP 343
Query: 275 DKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
+ YTHT LIDGLCK G + A RL L+ + + N+ Y ++ K+ K++ A +
Sbjct: 344 NVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEML 403
Query: 334 FESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
F M+ + F TY+++++ CKA A +L+ G R AV+D L
Sbjct: 404 FSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCK 463
Query: 390 SGCRREAKKIQSK 402
EA ++ +K
Sbjct: 464 KSRAPEAYELLNK 476
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 138/299 (46%), Gaps = 3/299 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I YC+ + + +RM+E G+ P+V TY +LI G + + +L++ M + G
Sbjct: 387 MIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEG 446
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P++++YN+++ L + + EA + L T+ I++ CK AL
Sbjct: 447 FRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQAL 506
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F + K GF ++ NILI C+ +++ + + + + G P TYT+++
Sbjct: 507 AFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGY 566
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + L L+ MKR G D F Y ++I+ K + EA E M+ G+
Sbjct: 567 CKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPE 626
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+ TL YCK +A ++L+ ++K+ + T L+ LC + A L +
Sbjct: 627 VTRVTLAYEYCKRNDSASAMIVLEPLDKKLW---IRTVRTLVRKLCSEKKVGVAALFFQ 682
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 92/197 (46%), Gaps = 4/197 (2%)
Query: 216 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
F +IGRL EA + M G+ ++ N ++ + + G ++ A + DEM +G D
Sbjct: 180 FSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPD 239
Query: 276 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
+ +++ G + G I+ A L M + GF + I+ L ++G ++ AI F
Sbjct: 240 SSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFR 299
Query: 336 SM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
M + ++S++ LCK + A ++L +++G + A++DGL G
Sbjct: 300 KMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRG 359
Query: 392 CRREAKKIQSKIRMAKI 408
+A ++ K+ + I
Sbjct: 360 WTEKAFRLFLKLVRSDI 376
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 182/376 (48%), Gaps = 15/376 (3%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE---MGIPPDVWSY 69
DA +L RM E G PDV +YN+L+ G + +L+LL M + G PPDV SY
Sbjct: 145 DAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 204
Query: 70 NSLMHCLFQLG--------KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
N++++ F+ G D+A V M+ + P T+N +L+G C + A+
Sbjct: 205 NTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI 264
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++ G P +VTY+ L+ LCK GR AR I + G P+ TY T+++
Sbjct: 265 GTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGH 324
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + ++ M R G D Y T+I G++ EAT + MV+ GV+ DI
Sbjct: 325 CKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDI 384
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y TLIN YC+ +++ A L EM G + T+ I++ GL A+
Sbjct: 385 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVS 444
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKR 357
+ K G L YN I+ L K+ D A+ +F+++ + D + T++ M+ L K R
Sbjct: 445 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGR 504
Query: 358 LPSASKLLLSCLKSGV 373
+ A L + +G+
Sbjct: 505 MDEAKDLFAAHSANGL 520
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 180/370 (48%), Gaps = 16/370 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL-LDEMLE 59
+LI C+ D G+ L + + G D +T+ L+ G + S ++D+ L M E
Sbjct: 97 ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI---CGDLTPCTATFNIMLNGLCKN-- 114
+G PDV+SYN+L+ L + EA + M G P ++N +LNG K
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGI 216
Query: 115 ------RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
+ D A+ + + K+G +P+ +TYN ++ G C +G+ + A LK++ G
Sbjct: 217 QTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVE 276
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
PN +TY+++M +N + +I +M ++G D Y T++ K GR+ E+
Sbjct: 277 PNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKL 336
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+ MV GV+ DI++YNTLI+ C GK++ A LL M G + D T+ LI+G C+
Sbjct: 337 FDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCR 396
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FT 344
+ A + M G N+ YN I+ L + A ++ S+ + T
Sbjct: 397 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELST 456
Query: 345 YSSMVHNLCK 354
Y+ ++H LCK
Sbjct: 457 YNIILHGLCK 466
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 174/368 (47%), Gaps = 43/368 (11%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
+ D +LN M + G+ PD +TYNS++ G + ++ L +M G+ P+V +Y+
Sbjct: 224 AMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYS 283
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
SLM+ L + G+ EA ++F M L P AT+ +L G CK + ++F + +
Sbjct: 284 SLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRI 343
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G P+++TYN LI G C AG++ A +L + G P+ +TY T++
Sbjct: 344 GVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLIN----------- 392
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
GYC ++ R+ +A ++MV+ GV +I++YN ++
Sbjct: 393 -----------------GYC-------RVSRMDDALALFKEMVSSGVSPNIITYNIILQG 428
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+ AA L + K G + + T+ I++ GLCK N+ L + + N D
Sbjct: 429 LFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCK-NNLTDEALRM-FQNLCLTDLQ 486
Query: 311 LE--AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 364
LE +N ++ L K G++D A ++F + V D TYS M NL + L L
Sbjct: 487 LETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDL 546
Query: 365 LLSCLKSG 372
LS ++G
Sbjct: 547 FLSMEENG 554
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 154/347 (44%), Gaps = 37/347 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ YC L +MR G+ P+VVTY+SL+ +N + + + D M + G
Sbjct: 250 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 309
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ +Y +L+ + G+ E+ ++F M+ + P T+N +++G C D A
Sbjct: 310 LEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 369
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + G P++VTY LI G C+ R+ A + KE+ SG +PN ITY I++
Sbjct: 370 KLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 429
Query: 182 FRNRKYKLGLEILSAMKRKG-------YTFDGFGYC------------------------ 210
F R+ E+ ++ + G Y G C
Sbjct: 430 FHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 489
Query: 211 ----TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+I A +K GR+ EA D +G+ D+ +Y+ + ++G LE L
Sbjct: 490 RTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLS 549
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
ME+ G D ++ L + G+I A +L +++ F +LEA
Sbjct: 550 MEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHF--SLEA 594
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 172/405 (42%), Gaps = 55/405 (13%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI---CGDLTPCTATFNIMLN 109
+ DE+L G ++ N + + + P A + M G +TP T+ I++
Sbjct: 42 VFDELLRRGRGASIYGLNRALADVAR-HSPAAAVSRYNRMARAGAGKVTPTVHTYAILIG 100
Query: 110 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI----LKELG-- 163
C+ D + K GF + +T+ L+KGLC R A I + ELG
Sbjct: 101 CCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 160
Query: 164 ---------------------------------DSGHAPNAITYTTIMKCCFRN------ 184
G P+ ++Y T++ F+
Sbjct: 161 PDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKL 220
Query: 185 --RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ +E+L+ M + G D Y +++ + G+ KEA +++M +DGV+ ++V
Sbjct: 221 TAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVV 280
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
+Y++L+N CK G+ A + D M K+G E D T+ L+ G CK G + + + M
Sbjct: 281 TYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLM 340
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVK-DSFTYSSMVHNLCKAKRL 358
+IG ++ YN ++D GK+D A + SM VK D TY ++++ C+ R+
Sbjct: 341 VRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRM 400
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A L + SGV ++ GL H+ AK++ I
Sbjct: 401 DDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI 445
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 16/184 (8%)
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA- 295
V + +Y LI C+ G+L+ + L + K+GF D T T L+ GLC A
Sbjct: 88 VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-------EVKDSFTYSSM 348
+ L M ++G ++ +YN ++ L + + A+ + M D +Y+++
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207
Query: 349 VHNLCK--------AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 400
++ K A+ + A ++L + +K+GV +++ G SG +EA
Sbjct: 208 LNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTL 267
Query: 401 SKIR 404
K+R
Sbjct: 268 KKMR 271
>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 418
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 143/284 (50%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E LE G P ++ +N LMH + G+ A VF + L P +FN ++NG K
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ +Q G P++ TY++LI GLCK ++ A + E+ D+G PN +T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A D +++M
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG LE A+ +M K+ D +T LI GLC+ G
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K G + + + M+
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 140/256 (54%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + + + + P VV++N+L+ G + L L + M G+ PDV++Y+ L++ L
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ K D+AN +F +M+ L P TF +++G CKN D A+ +++ + P+L
Sbjct: 217 CKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+TYN LI GLCK G L+ A+ ++ E+ G P+ ITYTT++ + + E
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKK 336
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M ++ D Y +I+ + GR +A + +M++ G++ +I +Y +IN +CK+G
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396
Query: 257 LEAAYLLLDEMEKQGF 272
+ LL EM++ G+
Sbjct: 397 VWTGSKLLKEMQRDGY 412
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 146/284 (51%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + + P V S+N+LM+ +LG D
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M + P T+++++NGLCK D+A +F + +G VP VT+ LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I K++ +P+ ITY T++ + K +++ M KG
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A +Y ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
L EM G + + T+T++I+ CK G++ L+ M + G+
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 124/271 (45%), Gaps = 31/271 (11%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
FNI+++ K A +F + K P +V++N L+ G K G L + +
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
SG P+ TY+ ++ + K E+ M G +G + T+I K GR+
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A + +QM++ + D+++YNTLI CK+G L+ A L+DEM +G + DK T+T LI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF 343
DG CK G+++ A EY K+ I I + D
Sbjct: 319 DGNCKEGDLETA---FEYRKKM---------------------IKENIRL-------DDV 347
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 348 AYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 136/300 (45%), Gaps = 4/300 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F+ ++ ++ + +A+ +R ++H F T +++ L K + +E
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+ G+ + + +M + + +L + A+ + + T++ ++K+G L
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
E M GVQ D+ +Y+ LIN CKE K++ A L DEM G + T T LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
DG CK G + A + M +L YN ++ L K G + A ++ + M +K
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D TY++++ CK L +A + +K +R+ A A++ GL G +A+K+
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 39/238 (16%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ Y + D G+ + N M+ +G+ PDV TY+ LI G + S + + +L DEML+ G
Sbjct: 177 LMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNG 236
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ P+ ++ +L+ HC + G+ D A +++ M+ L+P T+N ++ GLCK
Sbjct: 237 LVPNGVTFTTLIDGHC--KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQ 294
Query: 120 ALRMFRGLQKHGFVPELVTYNIL-----------------------------------IK 144
A + + G P+ +TY L I
Sbjct: 295 AQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALIS 354
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
GLC+ GR A +L+E+ G P TYT I+ + G ++L M+R GY
Sbjct: 355 GLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 109/219 (49%), Gaps = 9/219 (4%)
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
GY + + ++ +FVK G ++ A + + ++ +VS+NTL+N Y K G L+
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
+ L + M+ G + D YT+++LI+GLCK + A + M G N + ++D
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
K+G++D A+ +++ M + D TY+++++ LCK L A L+ G++
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310
Query: 377 KSAQKAVVDGLRHSGCRREA-----KKIQSKIRMAKISH 410
K ++DG G A K I+ IR+ +++
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAY 349
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 189/411 (45%), Gaps = 4/411 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ A C+ + D L +M + P+ TYN+LI G + ++ + EM
Sbjct: 273 VVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 332
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV + + LM L + GK EA VF M P ++NIMLNG +
Sbjct: 333 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT 392
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + G P+ T+N+LIK G L A I E+ D G P+ +TY T++
Sbjct: 393 DLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 452
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R K +E + M +G D + Y +I F G L +A + + +++ +G+ LDI
Sbjct: 453 CRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 512
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V ++++IN CK G++ A + D G D +++L+DG C G ++ A +
Sbjct: 513 VFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDA 572
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G + N+ Y +V+ K G+ID +++F M + + YS ++ L +A R
Sbjct: 573 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR 632
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
A +SG+ + V+ GL + C EA + ++R +
Sbjct: 633 TVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNV 683
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 198/410 (48%), Gaps = 4/410 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
ML+ + C++ + + M G +PDV +YN ++ G L DL D ML
Sbjct: 342 MLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD 401
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD +++N L+ G D+A +F +M + P T+ ++ LC+ D+A
Sbjct: 402 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 461
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ F + G P+ YN LI+G C G L A+ ++ E+ ++G + + +++I+
Sbjct: 462 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 521
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + I G D Y ++ + +G++++A + MV+ G++ +
Sbjct: 522 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 581
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V Y TL+N YCK G+++ L EM ++G + ++I+IDGL +AG A++
Sbjct: 582 VVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFH 641
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE---SMEVK-DSFTYSSMVHNLCKAK 356
M + G ++ YN ++ L K+ D AI +F+ +M VK + T ++M+ + + +
Sbjct: 642 EMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTR 701
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
R+ A L S +S + ++ L G EA+ + S ++ A
Sbjct: 702 RVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 751
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 178/392 (45%), Gaps = 7/392 (1%)
Query: 2 LIDAYCQFVSFDAGYTIL-NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L++ +C+ D IL +R E G PDV +Y+ L+ + DLL M E
Sbjct: 165 LLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 224
Query: 61 GI--PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G P+V +YN+++ F+ G ++A +F++M+ + P T+N +++ LCK R D
Sbjct: 225 GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMD 284
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A R + +P TYN LI G G+ + A + KE+ P+ +T + +M
Sbjct: 285 KAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 344
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ K K ++ M KG D F Y ++ + G L + TD + M+ DG+
Sbjct: 345 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 404
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D ++N LI Y G L+ A ++ +EM G + D T+ +I LC+ G + A
Sbjct: 405 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 464
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
M G + AYNC++ G + A + + D +SS+++NLCK
Sbjct: 465 FNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK 524
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
R+ A + + G+ ++DG
Sbjct: 525 LGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDG 556
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 168/384 (43%), Gaps = 42/384 (10%)
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P +Y LM C + +P+ A F ++ L N +L G C+ + TD AL
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179
Query: 122 R-MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH--APNAITYTTIM 178
+ + G VP++ +Y+IL+K LC G+ A +L+ + + G +PN + Y T++
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 239
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
F+ ++ M ++G D Y +V+ A K + +A ++ QMV V
Sbjct: 240 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 299
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+ +YN LI Y G+ + A + EM + D T ++L+ LCK G IK AR
Sbjct: 300 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 359
Query: 299 LEYMNKIGFDSNLEAYN----------CIVDR-----------LGKD------------- 324
+ M G + ++ +YN C+VD + D
Sbjct: 360 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 419
Query: 325 -GKIDHAINVFESME---VK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
G +D A+ +F M VK D TY +++ LC+ ++ A + + GV K A
Sbjct: 420 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 479
Query: 380 QKAVVDGLRHSGCRREAKKIQSKI 403
++ G G +AK++ S+I
Sbjct: 480 YNCLIQGFCTHGSLLKAKELISEI 503
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 42/248 (16%)
Query: 168 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
+P + TY +M CC R + +L L FG
Sbjct: 121 SPTSHTYAILMDCCTRAHRPELALAF-------------FG------------------- 148
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKL-EAAYLLLDEMEKQGFECDKYTHTILIDGL 286
Q++ G++++I+ N L+ +C+ + EA +LL + G D ++++IL+ L
Sbjct: 149 ---QLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSL 205
Query: 287 CKAGNIKGARLHLEYMNKIGF--DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 340
C G A L M + G N+ AYN ++D K+G ++ A ++F+ M +
Sbjct: 206 CDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPP 265
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 400
D TY+S+VH LCKA+ + A L + V ++ G +G +EA ++
Sbjct: 266 DLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVF 325
Query: 401 SKIRMAKI 408
++R I
Sbjct: 326 KEMRRHSI 333
>gi|240254074|ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
gi|332190928|gb|AEE29049.1| PPR repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 174/340 (51%), Gaps = 9/340 (2%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
TY++++ G R L ++ L I P V S+NS+M +LG D A F +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
+ L P + NI++NGLC AL + + KHG P+ VTYNIL KG G +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 153 RTARWILKELGDSGHAPNAITYTTIM--KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
A +++++ D G +P+ ITYT ++ +C N +GL +L M +G+ + C
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN--IDMGLVLLKDMLSRGFELNSIIPC 366
Query: 211 TV-IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
+V ++ K GR+ EA QM DG+ D+V+Y+ +I+ CK GK + A L DEM
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 329
+ + TH L+ GLC+ G + AR L+ + G ++ YN ++D K G I+
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 330 AINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 365
A+ +F E+ T++S+++ CK + + A K+L
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 184/392 (46%), Gaps = 26/392 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C S + + M + G+ PD VTYN L G ++S + +++ +ML+
Sbjct: 262 ILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK 321
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-----GDLTPCTATFNIMLNGLCKNR 115
G+ PDV +Y L+ QLG D + +DM+ + PC+ +ML+GLCK
Sbjct: 322 GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS----VMLSGLCKTG 377
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D AL +F ++ G P+LV Y+I+I GLCK G+ A W+ E+ D PN+ T+
Sbjct: 378 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
++ + +L ++ G T D Y VI + K G ++EA + + ++
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G+ + ++N+LI YCK + A +LD ++ G ++T L+D GN K
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK---IDHAI--NVFE-------SMEVK--- 340
M G Y+ I L + K +H + +FE ME +
Sbjct: 558 DELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 617
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
D TY++++ LC+ K L S + + L +KS
Sbjct: 618 PDQITYNTIIQYLCRVKHL-SGAFVFLEIMKS 648
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 197/433 (45%), Gaps = 40/433 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ C+ D ++ N+M+ G+SPD+V Y+ +I G + +L L DEM +
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P+ ++ +L+ L Q G EA + +I T +NI+++G K+ + A
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F+ + + G P + T+N LI G CK + AR IL + G AP+ ++YTT+M
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ--------- 231
K E+ MK +G Y + + + + + +
Sbjct: 548 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 607
Query: 232 ---MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
M ++G+ D ++YNT+I C+ L A++ L+ M+ + + T+ ILID LC
Sbjct: 608 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCV 667
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-------EVKD 341
G I+ A + + + + AY ++ G + A+ +F + ++D
Sbjct: 668 YGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRD 727
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCL---KSGVRILKSAQKAVVD-GLRHSGCRREAK 397
YS++++ LC+ + L++C +GV L S +++ V + + CRR
Sbjct: 728 ---YSAVINRLCR--------RHLMNCFPGQSNGVCCLISNERSFVYCPILSANCRRHTL 776
Query: 398 KIQSKIRMAKISH 410
++ K+SH
Sbjct: 777 SVE------KLSH 783
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 186/434 (42%), Gaps = 56/434 (12%)
Query: 14 AGYTILNRMREAGISPDVVTYNSLIAGATR---------------------NSLLSCS-- 50
+ ++ M + G+SPDV+TY L+ G + NS++ CS
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 51 -------------LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 97
L L ++M G+ PD+ +Y+ ++H L +LGK D A ++ +M +
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 98 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 157
P + T +L GLC+ A + L G ++V YNI+I G K+G + A
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 489
Query: 158 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 217
+ K + ++G P+ T+ +++ + + +IL +K G Y T++ A+
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE----------- 266
G K + +M +G+ V+Y+ + C+ K E +L E
Sbjct: 550 NCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLR 609
Query: 267 -MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
ME +G D+ T+ +I LC+ ++ GA + LE M D++ YN ++D L G
Sbjct: 610 DMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYG 669
Query: 326 KIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
I A + S++ ++ F Y++++ C A KL L G +
Sbjct: 670 YIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYS 729
Query: 382 AVVDGLRHSGCRRE 395
AV++ L CRR
Sbjct: 730 AVINRL----CRRH 739
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 138/328 (42%), Gaps = 53/328 (16%)
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW-ILKELGDSGHAPNAIT 173
R D++L + + ++ +YN ++ + ++ W + KE+ D N T
Sbjct: 138 RMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKM----WDVYKEIKDK----NEHT 189
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
Y+T++ R +K + + L + K + ++++ + K+G + A + ++
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY---------------- 277
G+ + S+N LIN C G + A L +M K G E D
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 278 -------------------THTILIDGLCKAGNIKGARLHLEYMNKIGFDSN-LEAYNCI 317
T+TIL+ G C+ GNI + L+ M GF+ N + + +
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 318 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ L K G+ID A+++F M+ D YS ++H LCK + A L L
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA--LWLYDEMCDK 427
Query: 374 RILKSAQK--AVVDGLRHSGCRREAKKI 399
RIL +++ A++ GL G EA+ +
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSL 455
>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 418
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 144/284 (50%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E LE G P ++ +N LMH + G+ A VF + L P +FN ++NG K
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ +Q G ++ TY++LI GLCKA ++ A + E+ D+G PN +T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +NR+ + +EI M + + D Y T+I K G LK+A D +++M
Sbjct: 245 TTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG LE A+ M K+ D +T LI GLC+ G
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ + G + + + + M+
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCEKGDVWTGLKLLKEMQ 408
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 140/256 (54%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + + + + P VV++N+L+ G + L L + M G+ DV++Y+ L++ L
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQSDVYTYSVLINGL 216
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ K D+AN +F +M+ L P TF +++G CKNR D A+ +++ + P+L
Sbjct: 217 CKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDL 276
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+TYN LI GLCK G L+ A+ ++ E+ G P+ ITYTT++ + + E
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKR 336
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M ++ D Y +I+ + GR +A + +M++ G++ +I +Y +IN +C++G
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCEKGD 396
Query: 257 LEAAYLLLDEMEKQGF 272
+ LL EM++ G+
Sbjct: 397 VWTGLKLLKEMQRDGY 412
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 144/284 (50%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + + P V S+N+LM+ +LG D
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M + T+++++NGLCK D+A +F + +G VP VT+ LI
Sbjct: 189 EGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK R+ A I K++ +P+ ITY T++ + K +++ M KG
Sbjct: 249 DGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A +Y ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
L EM G + + T+T++I+ C+ G++ L+ M + G+
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCEKGDVWTGLKLLKEMQRDGY 412
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 122/271 (45%), Gaps = 31/271 (11%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
FNI+++ K A +F + K P +V++N L+ G K G L + +
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
SG + TY+ ++ + K E+ M G +G + T+I K R+
Sbjct: 199 ASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVD 258
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A + +QM++ + D+++YNTLI CK+G L+ A L+DEM +G + DK T+T LI
Sbjct: 259 VAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF 343
DG CK G+++ A EY ++ I I + D
Sbjct: 319 DGNCKEGDLETA---FEYRKRM---------------------IKENIRL-------DDV 347
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 348 AYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 100/202 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ D + + M + G+ P+ VT+ +LI G +N + ++++ +ML
Sbjct: 211 VLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQ 270
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+ +YN+L++ L + G +A + +M L P T+ +++G CK + A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETA 330
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K + V Y LI GLC+ GR A +L+E+ G P TYT I+
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 181 CFRNRKYKLGLEILSAMKRKGY 202
GL++L M+R GY
Sbjct: 391 FCEKGDVWTGLKLLKEMQRDGY 412
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 135/300 (45%), Gaps = 4/300 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F+ ++ ++ + +A+ +R +++H F T +++ L K + +E
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLIKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+ G+ + + +M + + +L + A+ + + T++ ++K+G L
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
E M GVQ D+ +Y+ LIN CK K++ A L DEM G + T T LI
Sbjct: 189 EGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
DG CK + A + M +L YN ++ L K G + A ++ + M +K
Sbjct: 249 DGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D TY++++ CK L +A + +K +R+ A A++ GL G +A+K+
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 90/172 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ D I +M +SPD++TYN+LI G + L + DL+DEM G
Sbjct: 247 LIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y +L+ + G + A + MI ++ + +++GLC+ + +A
Sbjct: 307 LKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+M R + G PE+ TY ++I C+ G + T +LKE+ G+ P+ +T
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCEKGDVWTGLKLLKEMQRDGYMPSVVT 418
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 195/414 (47%), Gaps = 16/414 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE-- 59
LI C + RM++ G +P+ +TY +L+ G R +S +L L EML
Sbjct: 172 LIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDS 231
Query: 60 ----MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
+ P V SY+ ++ L + + DEA +F++M +TP ++ +++G C
Sbjct: 232 SLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGG 291
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
+ A R+F + G P +VT+N+LI LCK G++ A+ +L+ + G PN +TY
Sbjct: 292 KWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYN 351
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
++++ E+ +M KG D Y +I + K +++EA M+
Sbjct: 352 SLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQV 411
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G + D+ +Y L+ + GK+ A L M+ G D Y + I ++GLCK G + A
Sbjct: 412 GKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEA 471
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 351
+ ++E +NC++D L K GK++ A +FE + + D TY+ M+H
Sbjct: 472 MELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHE 531
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
C+ ++ A+ L K+G K ++ G E+KK++ + +
Sbjct: 532 FCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGF------FESKKLEKVVEL 579
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 166/346 (47%), Gaps = 10/346 (2%)
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
P + S+ L+ L ++ + ++ M ++P T NI+LN LC L +
Sbjct: 94 PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
G+ + G++P++VTY LIKGLC R+ A + + G PNAITY T+MK R
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCR 213
Query: 184 NRKYKLGL----EILSAMKRKGYTFDG--FGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ L E+L+ G F Y +I A K R EA D E+M G+
Sbjct: 214 TGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGM 273
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
++SY +LI+ +C GK E A L +EM QG + + T +LID LCK G + A+
Sbjct: 274 TPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKD 333
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 353
LE M + G NL YN +++ G ++ A +F SM K D Y+ +++ C
Sbjct: 334 LLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYC 393
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
K ++ A KL L+ G R A++ GL G +AKK+
Sbjct: 394 KTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKL 439
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 194/409 (47%), Gaps = 10/409 (2%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
++ + + M + +P + ++ L++G + S L ++M GI PD +
Sbjct: 75 ITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTL 134
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N L++CL + + E V ++ P T+ ++ GLC A +F +QK
Sbjct: 135 NILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQK 194
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKE-LGDSG-----HAPNAITYTTIMKCCFR 183
G P +TY L+KGLC+ G + A + +E L DS P I+Y+ I+ +
Sbjct: 195 LGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCK 254
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
+R+ ++ MK +G T Y ++I F G+ +EA +MV GVQ ++V+
Sbjct: 255 DRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVT 314
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
+N LI++ CKEGK+ A LL+ M ++G + T+ LI+G C G++ AR M
Sbjct: 315 FNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMP 374
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLP 359
G + ++ Y +++ K K++ A+ ++ M + D TY +++ L + ++
Sbjct: 375 SKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVG 434
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
A KL G+ ++GL +GC EA ++ +K++ I
Sbjct: 435 DAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNI 483
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 168/352 (47%), Gaps = 1/352 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++IDA C+ D + M+ G++P V++Y SLI G + L +EM+
Sbjct: 247 IIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQ 306
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V ++N L+ L + GK EA + + MI + P T+N ++ G C ++A
Sbjct: 307 GVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSA 366
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G P+++ Y +LI G CK ++ A + + G P+ TY ++
Sbjct: 367 RELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTG 426
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+ K ++ MK G D + Y + K G L EA + ++ + ++LD
Sbjct: 427 LFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLD 486
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I +N LI+ CK GKLE A+ L +++ ++ + D T+ I+I C+ G + A + +
Sbjct: 487 IECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQ 546
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD-SFTYSSMVHN 351
M K G + Y ++ + K++ + + M +D S + + HN
Sbjct: 547 KMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDVNILRHN 598
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 187/418 (44%), Gaps = 45/418 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ C G ++ + G PD+VTY +LI G +S + L M ++
Sbjct: 136 ILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKL 195
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG------DLTPCTATFNIMLNGLCKN 114
G P+ +Y +LM L + G A ++ Q+M+ + P +++I+++ LCK+
Sbjct: 196 GCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKD 255
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
R D A +F ++ G P +++Y LI G C G+ A+ + E+ + G PN +T+
Sbjct: 256 RREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTF 315
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
+ I K G++ EA D +E M+
Sbjct: 316 NVL-----------------------------------IDVLCKEGKVIEAKDLLEVMIQ 340
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G+ ++++YN+LI +C G L +A L M +G E D +T+LI+G CK ++
Sbjct: 341 RGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEE 400
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVH 350
A M ++G +++ Y ++ L + GK+ A +F M+V D + Y ++
Sbjct: 401 AMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLN 460
Query: 351 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
LCK L A +L +++ ++DGL +G A ++ K+ ++
Sbjct: 461 GLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEEL 518
>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
contains a PPR repeat domain PF|01535 [Arabidopsis
thaliana]
Length = 797
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 174/340 (51%), Gaps = 9/340 (2%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
TY++++ G R L ++ L I P V S+NS+M +LG D A F +
Sbjct: 202 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 261
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
+ L P + NI++NGLC AL + + KHG P+ VTYNIL KG G +
Sbjct: 262 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 321
Query: 153 RTARWILKELGDSGHAPNAITYTTIM--KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
A +++++ D G +P+ ITYT ++ +C N +GL +L M +G+ + C
Sbjct: 322 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN--IDMGLVLLKDMLSRGFELNSIIPC 379
Query: 211 TV-IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
+V ++ K GR+ EA QM DG+ D+V+Y+ +I+ CK GK + A L DEM
Sbjct: 380 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 439
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 329
+ + TH L+ GLC+ G + AR L+ + G ++ YN ++D K G I+
Sbjct: 440 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 499
Query: 330 AINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 365
A+ +F E+ T++S+++ CK + + A K+L
Sbjct: 500 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 539
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 184/392 (46%), Gaps = 26/392 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C S + + M + G+ PD VTYN L G ++S + +++ +ML+
Sbjct: 275 ILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK 334
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-----GDLTPCTATFNIMLNGLCKNR 115
G+ PDV +Y L+ QLG D + +DM+ + PC+ +ML+GLCK
Sbjct: 335 GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS----VMLSGLCKTG 390
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D AL +F ++ G P+LV Y+I+I GLCK G+ A W+ E+ D PN+ T+
Sbjct: 391 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 450
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
++ + +L ++ G T D Y VI + K G ++EA + + ++
Sbjct: 451 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 510
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G+ + ++N+LI YCK + A +LD ++ G ++T L+D GN K
Sbjct: 511 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 570
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK---IDHAI--NVFE-------SMEVK--- 340
M G Y+ I L + K +H + +FE ME +
Sbjct: 571 DELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 630
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
D TY++++ LC+ K L S + + L +KS
Sbjct: 631 PDQITYNTIIQYLCRVKHL-SGAFVFLEIMKS 661
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 179/388 (46%), Gaps = 24/388 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ C+ D ++ N+M+ G+SPD+V Y+ +I G + +L L DEM +
Sbjct: 381 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 440
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P+ ++ +L+ L Q G EA + +I T +NI+++G K+ + A
Sbjct: 441 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 500
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F+ + + G P + T+N LI G CK + AR IL + G AP+ ++YTT+M
Sbjct: 501 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 560
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ--------- 231
K E+ MK +G Y + + + + + +
Sbjct: 561 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 620
Query: 232 ---MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
M ++G+ D ++YNT+I C+ L A++ L+ M+ + + T+ ILID LC
Sbjct: 621 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCV 680
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-------EVKD 341
G I+ A + + + + AY ++ G + A+ +F + ++D
Sbjct: 681 YGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRD 740
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCL 369
YS++++ LC+ + L + SK CL
Sbjct: 741 ---YSAVINRLCR-RHLVNESKFFF-CL 763
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 186/433 (42%), Gaps = 56/433 (12%)
Query: 14 AGYTILNRMREAGISPDVVTYNSLIAGATR---------------------NSLLSCS-- 50
+ ++ M + G+SPDV+TY L+ G + NS++ CS
Sbjct: 323 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 382
Query: 51 -------------LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 97
L L ++M G+ PD+ +Y+ ++H L +LGK D A ++ +M +
Sbjct: 383 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 442
Query: 98 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 157
P + T +L GLC+ A + L G ++V YNI+I G K+G + A
Sbjct: 443 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 502
Query: 158 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 217
+ K + ++G P+ T+ +++ + + +IL +K G Y T++ A+
Sbjct: 503 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 562
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE----------- 266
G K + +M +G+ V+Y+ + C+ K E +L E
Sbjct: 563 NCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLR 622
Query: 267 -MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
ME +G D+ T+ +I LC+ ++ GA + LE M D++ YN ++D L G
Sbjct: 623 DMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYG 682
Query: 326 KIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
I A + S++ ++ F Y++++ C A KL L G +
Sbjct: 683 YIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYS 742
Query: 382 AVVDGLRHSGCRR 394
AV++ L CRR
Sbjct: 743 AVINRL----CRR 751
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 145/325 (44%), Gaps = 16/325 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ CQ ++L+ + +G + D+V YN +I G ++ + +L+L ++E G
Sbjct: 452 LLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETG 511
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL--CKNRYTDN 119
I P V ++NSL++ + EA ++ + L P ++ +++ C N + +
Sbjct: 512 ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSID 571
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE------------LGDSGH 167
LR R ++ G P VTY+++ KGLC+ + +L+E + G
Sbjct: 572 ELR--REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGI 629
Query: 168 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
P+ ITY TI++ R + L MK + Y +I + G +++A
Sbjct: 630 PPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADS 689
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
++ + V L +Y TLI +C +G E A L ++ +GF ++ +I+ LC
Sbjct: 690 FIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLC 749
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLE 312
+ + ++ M G +L+
Sbjct: 750 RRHLVNESKFFFCLMLSQGISPDLD 774
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 138/328 (42%), Gaps = 53/328 (16%)
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW-ILKELGDSGHAPNAIT 173
R D++L + + ++ +YN ++ + ++ W + KE+ D N T
Sbjct: 151 RMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKM----WDVYKEIKDK----NEHT 202
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
Y+T++ R +K + + L + K + ++++ + K+G + A + ++
Sbjct: 203 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 262
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY---------------- 277
G+ + S+N LIN C G + A L +M K G E D
Sbjct: 263 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 322
Query: 278 -------------------THTILIDGLCKAGNIKGARLHLEYMNKIGFDSN-LEAYNCI 317
T+TIL+ G C+ GNI + L+ M GF+ N + + +
Sbjct: 323 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 382
Query: 318 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ L K G+ID A+++F M+ D YS ++H LCK + A L L
Sbjct: 383 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA--LWLYDEMCDK 440
Query: 374 RILKSAQK--AVVDGLRHSGCRREAKKI 399
RIL +++ A++ GL G EA+ +
Sbjct: 441 RILPNSRTHGALLLGLCQKGMLLEARSL 468
>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
brasiliensis]
Length = 427
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 152/285 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV+YN+L+ G R L L ML
Sbjct: 143 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 202
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN +F +M+ L P TF +++G CKN D A
Sbjct: 203 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 262
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + +P+L+TYN LI GLCK G L+ A ++ E+ G P+ ITYTT++
Sbjct: 263 MEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDG 322
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + E M ++ D Y +I+ + GR +A + +M++ G++ +
Sbjct: 323 CCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPN 382
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y +IN +CK+G + LL EM++ G T+ +L++G
Sbjct: 383 XRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 427
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 154/297 (51%), Gaps = 2/297 (0%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ ++ + + + D + + G+ P V SYN+LM+ +LG D
Sbjct: 131 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 190
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M+ + P T+++++NGLCK D+A +F + G VP VT+ LI
Sbjct: 191 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLI 250
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I K + P+ ITY T++ + K ++ M KG
Sbjct: 251 DGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLK 310
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L A ++ ++M+ + + LD V+Y LI+ C+EG+ A +
Sbjct: 311 PDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKM 370
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVD 319
L EM G + + T+T++I+ CK G++ KG++L L+ M + G ++ YN +++
Sbjct: 371 LREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKL-LKEMQRDGHVPSVVTYNVLMN 426
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 142/296 (47%), Gaps = 1/296 (0%)
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
+LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 129 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 188
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
D R+ + G P++ TY++LI GLCK ++ A + E+ G PN +T+TT
Sbjct: 189 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 248
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ +N + L +EI M + D Y T+I K G LK+A +++M G
Sbjct: 249 LIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKG 308
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
++ D ++Y TLI+ CKEG L+ A+ M ++ D +T LI GLC+ G A
Sbjct: 309 LKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAE 368
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
L M +G N Y I++ K G + + + M+ +D S + +N+
Sbjct: 369 KMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQ-RDGHVPSVVTYNV 423
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 130/272 (47%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y ++ + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 109 VLEHLMKLKYFKLVWGFYKXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 168
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ ++Y T+M R G + SAM G D + Y +I K ++ +A
Sbjct: 169 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 228
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ + V++ TLI+ +CK G+++ A + M Q D T+ LI GL
Sbjct: 229 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGL 288
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K A ++ M+ G + Y ++D K+G +D A + M + D
Sbjct: 289 CKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDD 348
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 349 VAYTALISGLCQEGRSVDAEKMLREMLSVGLK 380
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 182/384 (47%), Gaps = 7/384 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
D +LN G +P V+T+ +LI G + + +L + M+ D+ +Y
Sbjct: 369 LDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGV 428
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
L++ L + + EA +M L P T+ +++G CK AL +F+ ++ G
Sbjct: 429 LINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEG 488
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
P TY LI GL + +L A ++ ++ + G P ITYTT+++ + ++
Sbjct: 489 CHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAF 548
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+ M++ G T D Y + A K GR +EA + +V GV L V+Y +L++ +
Sbjct: 549 RLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGF 605
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
K G + A +L+++M +G + D YT+++L+ LCK + A L+ M G N+
Sbjct: 606 SKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNI 665
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
AY I+ + K+GK DHA ++F M + TY+ + + CK R+ A L+
Sbjct: 666 VAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGE 725
Query: 368 CLKSGVRILKSAQKAVVDGLRHSG 391
+ GV ++G H G
Sbjct: 726 MERDGVTPDVVTYNIFINGCGHMG 749
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 196/437 (44%), Gaps = 41/437 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ ++ M G S ++ TY LI G + + + LLDEM
Sbjct: 254 ILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLR 313
Query: 61 GIPPDVWSYNSLM--HC------------------------------LFQL--GKPDEAN 86
G+ P VW+YN+++ +C ++ L GK DEA
Sbjct: 314 GVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEAE 373
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ I TP TF ++NG CK D+ALR+ + +L Y +LI L
Sbjct: 374 ELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVL 433
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
K RL+ A+ L E+ +G APN +TYT+I+ + LE+ M+ +G +
Sbjct: 434 IKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNA 493
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ Y ++I ++ +L +A + +M DG+ +++Y TLI CK+ + + A+ L +
Sbjct: 494 WTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEM 553
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
ME+ G D+ + +L D LCK+G + A ++ + G Y +VD K G
Sbjct: 554 MEQNGLTPDEQAYNVLTDALCKSGRAEEA---YSFLVRKGVVLTKVTYTSLVDGFSKAGN 610
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
D A + E M + D +TYS ++ LCK K+L A +L SGV+ A
Sbjct: 611 TDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTI 670
Query: 383 VVDGLRHSGCRREAKKI 399
++ + G AK +
Sbjct: 671 IISEMIKEGKHDHAKSL 687
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 191/429 (44%), Gaps = 43/429 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS-------------LLS 48
+I AYC+ S + +RE+G+ D T N+L+ G R S L+
Sbjct: 185 MIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMG 244
Query: 49 C----------------------SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
C +L L+ M+ G ++ +Y L+ L + G+ +A
Sbjct: 245 CRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDAR 304
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ +M + P T+N M++G CK+ +AL + ++++G P+ TYN LI GL
Sbjct: 305 GLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGL 364
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C G+L A +L G P IT+T ++ + + L + S M D
Sbjct: 365 C-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDL 423
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I +K RLKEA + + +M +G+ ++V+Y ++I+ YCK G + AA +
Sbjct: 424 QAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKL 483
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
ME +G + +T+ LI GL + + A + M + G + Y ++ K +
Sbjct: 484 MEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHE 543
Query: 327 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
D+A +FE ME D Y+ + LCK+ R A L ++ GV + K +
Sbjct: 544 FDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRKGVVLTKVTYTS 600
Query: 383 VVDGLRHSG 391
+VDG +G
Sbjct: 601 LVDGFSKAG 609
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 167/348 (47%), Gaps = 18/348 (5%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
++ +M+E GI+P V+TY +LI G + + L + M + G+ PD +YN L L
Sbjct: 515 LITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALC 574
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G+ +EA + ++ + T+ +++G K TD A + + G +L
Sbjct: 575 KSGRAEEA---YSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLY 631
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY++L++ LCK +L A IL ++ SG N + YT I+ + K+ + + M
Sbjct: 632 TYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEM 691
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
G+ Y I+++ KIGR++EA + +M DGV D+V+YN IN G +
Sbjct: 692 ISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYI 751
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A+ L M E + +T+ +L+ +K + ++ Y++ G + +E N +
Sbjct: 752 DRAFSTLKRMVDASCEPNCWTYWLLLKHF-----LKMSLINAHYVDTSGMWNWIE-LNMV 805
Query: 318 VDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 365
L + + H +N TYSS++ CKA RL A LL
Sbjct: 806 WQLLER--MMKHGLN-------PTVVTYSSIIAGFCKATRLEEACVLL 844
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 172/360 (47%), Gaps = 5/360 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + + + G+ PD VTYN++I + L+ + + E G+ D ++ N+L+
Sbjct: 166 LYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYC 225
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ +A + M ++ I++ GLC+ R AL + + G L
Sbjct: 226 RTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLH 285
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY +LIKGLCK GR+ AR +L E+ G P+ TY ++ ++ + K L I + M
Sbjct: 286 TYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALM 345
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
++ G D + Y ++I G+L EA + + + G ++++ LIN YCK ++
Sbjct: 346 EQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERI 404
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A + M + D + +LI+ L K +K A+ L M G N+ Y I
Sbjct: 405 DDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSI 464
Query: 318 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+D K G + A+ VF+ ME + +++TY S+++ L + K+L A L+ + G+
Sbjct: 465 IDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGI 524
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 178/393 (45%), Gaps = 23/393 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D + + + D ++ +M G D+ TY+ L+ + L+ +L +LD+M G
Sbjct: 601 LVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSG 660
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ ++ +Y ++ + + GK D A +F +MI P T+ + ++ CK + A
Sbjct: 661 VKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAE 720
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ +++ G P++VTYNI I G G + A LK + D+ PN TY ++
Sbjct: 721 HLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLL--- 777
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K+ L + +++A + D G I L +E+M+ G+ +
Sbjct: 778 ----KHFLKMSLINA-----HYVDTSGMWNWI-------ELNMVWQLLERMMKHGLNPTV 821
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y+++I +CK +LE A +LLD M + ++ +T+LI C A +
Sbjct: 822 VTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTD 881
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKR 357
M + GF LE+Y+ ++ L +G D A ++F + D + + L KA
Sbjct: 882 MIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGH 941
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
+ S+LL + RI + + D +R +
Sbjct: 942 VDFCSQLLAAMDNRHCRIDSESYSMLTDSIREA 974
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 151/355 (42%), Gaps = 21/355 (5%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
YN + L + + +++ ++ L P T T+N M+ CK A R F L+
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
+ G + T N L+ G C+ LR A W+L + G N +YT +++ R +
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVR 266
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
L ++ M G + + Y +I K GR+ +A +++M GV + +YN +I
Sbjct: 267 EALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
+ YCK G+++ A + ME+ G D +T+ LI GLC G + A L GF
Sbjct: 327 DGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFT 385
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
+ + +++ K +ID A+ V +M D Y +++ L K RL A +
Sbjct: 386 PTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKET 445
Query: 365 LLSCLKSGVRILKSAQKAVVDG----------------LRHSGCRREAKKIQSKI 403
L +G+ +++DG + H GC A S I
Sbjct: 446 LNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLI 500
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 199/400 (49%), Gaps = 5/400 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ + + + N M + +SP+ VTYN+LI G +L LLD M G
Sbjct: 344 LINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAG 403
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ + +Y +L++ L + K + A R+ + M D+ + ++++GLCKN D A+
Sbjct: 404 LRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAV 463
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + K G P+++TY+ LI G C+ G +++A+ I+ + SG N I Y+T++
Sbjct: 464 QLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNF 523
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ +++ + M G+ D F ++++ + G+L EA ++ M G+ +
Sbjct: 524 CQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNS 583
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y+ +IN Y G A+ D+M K G +T+ L+ GLCK GN+ A+ L
Sbjct: 584 ITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNR 643
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
++ I + YN ++ K G + A+ +F+ M + DS+TYSS++ LC+ +
Sbjct: 644 LHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGK 703
Query: 358 LPSASKLLLSCLKSGVRILKSAQ-KAVVDGLRHSGCRREA 396
+A L + + G +VDGL +G + A
Sbjct: 704 AVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAA 743
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 179/404 (44%), Gaps = 39/404 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C + +L +M E G P +VTYN+L+ + +++L+D M+
Sbjct: 238 ILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICK 297
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI DV +YN + L + +A + + M ++P T+N ++NG K A
Sbjct: 298 GIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVA 357
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F + K P VTYN LI G C G A +L + +G N +TY T++
Sbjct: 358 AQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNG 417
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K++L +L M+ Y +I K G L EA + M DGV D
Sbjct: 418 LCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPD 477
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF---------------------------- 272
+++Y++LIN +C+ G +++A ++ M + G
Sbjct: 478 VITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYA 537
Query: 273 -------ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
D +T +L+ LC+ G + A L +M++IG N Y+CI++ G G
Sbjct: 538 VMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIG 597
Query: 326 KIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 365
+A + F+ M + FTY S++ LCK L A K L
Sbjct: 598 DPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFL 641
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 179/371 (48%), Gaps = 4/371 (1%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
++ LI + ++ +++ + + +G P V++ N ++ + + + + +F++M
Sbjct: 165 VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 224
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
+ P TFNI++NGLC A + + ++++GFVP +VTYN L+ CK GR
Sbjct: 225 SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 284
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
+ A ++ + G + TY + N + +L M+++ + + Y T+
Sbjct: 285 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTL 344
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I FVK G++ A +M + + V+YN LI +C G E A LLD ME G
Sbjct: 345 INGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGL 404
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI- 331
++ T+ L++GLCK + A+ LE M AY ++D L K+G +D A+
Sbjct: 405 RLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQ 464
Query: 332 ---NVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
N+++ D TYSS+++ C+ + SA +++ +SG+ + K ++
Sbjct: 465 LVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFC 524
Query: 389 HSGCRREAKKI 399
G EA K+
Sbjct: 525 QHGNVTEAMKV 535
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 162/353 (45%), Gaps = 39/353 (11%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
+++ M + GI P+V T+N LI G L + +LL +M E G P + +YN+L++
Sbjct: 218 WSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNW 277
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
+ G+ A + MIC + T+N+ ++ LC N + A + + ++K P
Sbjct: 278 YCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPN 337
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
VTYN LI G K G++ A + E+ +PN +TY ++
Sbjct: 338 EVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIG---------------- 381
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
G+C V G +EA ++ M G++L+ V+Y TL+N CK
Sbjct: 382 ------------GHCHV-------GDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHE 422
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
K E A LL+ M +T+LIDGLCK G + A + M K G + ++ Y+
Sbjct: 423 KFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYS 482
Query: 316 CIVDRLGKDGKIDHAINV----FESMEVKDSFTYSSMVHNLCKAKRLPSASKL 364
+++ + G I A + + S V + YS++++N C+ + A K+
Sbjct: 483 SLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKV 535
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 189/410 (46%), Gaps = 5/410 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ D ++ M + G++PDV+TY+SLI G R + + +++ M
Sbjct: 448 VLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRS 507
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + Y++L++ Q G EA +V+ M C T N++++ LC++ A
Sbjct: 508 GLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEA 567
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + G VP +TY+ +I G G A ++ G P+ TY +++K
Sbjct: 568 EKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKG 627
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + L+ + D Y T++A K G L EA ++MV + V D
Sbjct: 628 LCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPD 687
Query: 241 IVSYNTLINLYCKEGK-LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+Y++L+ C++GK + A L M + + +T L+DGL KAG+ K A
Sbjct: 688 SYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFF 747
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
E M K G + A+N I+D + G++ A + F +M + TY+ ++H K
Sbjct: 748 EEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKK 807
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
+ L L + ++ G+ K +++ GL SG K+ K+ M
Sbjct: 808 QALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIM 857
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 189/408 (46%), Gaps = 5/408 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ + + ++M + + PD TY+SL+ G R ++ L + G
Sbjct: 659 LLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRG 718
Query: 62 -IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P+ Y L+ L + G P A F++M+ P T FN +++ + A
Sbjct: 719 TLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKA 778
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
F ++ G P L TYNIL+ G K L + + G P+ +T+ +++
Sbjct: 779 NDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILG 838
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ LG+++L M +G D F + +I + + G++++A D + M T GV D
Sbjct: 839 LSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPD 898
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+YN + N K+ + ++L EM + G + LI+G+C+ G+I+GA +
Sbjct: 899 RDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKD 958
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
M +GF S+ A + +V L GK + A+ V + M + T+++++H C+
Sbjct: 959 EMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDA 1018
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++ A KL G+++ A ++ G+ +G A ++ ++R
Sbjct: 1019 KIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMR 1066
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 146/337 (43%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ MR G+ P++ TYN L+ G ++ L L L M+ GI PD +++SL+ L
Sbjct: 781 FFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLS 840
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G PD ++ MI TFNI++N ++ A + + G P+
Sbjct: 841 KSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRD 900
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN + GL K R + +L E+ ++G P Y T++ R + ++ M
Sbjct: 901 TYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEM 960
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ G+ ++ + G+ ++A ++ M+ + I ++ TL++ +C++ K+
Sbjct: 961 EALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKI 1020
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A L ME G + D + +LI G+C G+ A E M N+ Y +
Sbjct: 1021 AEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVL 1080
Query: 318 VDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCK 354
VD + + + ++ + ++ +L K
Sbjct: 1081 VDAISAANNLIQGEKLLTDLQERGLISWGGSTQHLDK 1117
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 125/286 (43%), Gaps = 36/286 (12%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D G +L +M G D T+N LI + + + + DL++ M +G+ PD +YN +
Sbjct: 846 DLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHI 905
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ L + E+ V +M+ + P A + ++NG+C+ A ++ ++ GF
Sbjct: 906 FNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGF 965
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
V + +++GL G+ A +L + P T+TT+M R+ K
Sbjct: 966 GSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAK------ 1019
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
I A+K KG M G++LD+V+YN LI C
Sbjct: 1020 IAEALKLKGV-----------------------------MELCGLKLDVVAYNVLIMGMC 1050
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARL 297
G AA+ L +EM + + T+ +L+D + A N I+G +L
Sbjct: 1051 ANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKL 1096
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 88/191 (46%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
+F +L+ M E G+ P Y +LI G R + + L DEM +G + +
Sbjct: 914 AFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAES 973
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+++ L GK ++A V M+ L P ATF +++ C++ AL++ ++
Sbjct: 974 AMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELC 1033
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G ++V YN+LI G+C G A + +E+ PN TY ++ G
Sbjct: 1034 GLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQG 1093
Query: 191 LEILSAMKRKG 201
++L+ ++ +G
Sbjct: 1094 EKLLTDLQERG 1104
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 2/166 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ + + + M G V ++++ G ++ +LD ML M
Sbjct: 940 LINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMR 999
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P + ++ +LMH + K EA ++ M +CG L +N+++ G+C N + A
Sbjct: 1000 LLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCG-LKLDVVAYNVLIMGMCANGDSAAA 1058
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
++ ++ P + TY +L+ + A L +L +L + G
Sbjct: 1059 FELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERG 1104
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 76/170 (44%), Gaps = 4/170 (2%)
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
++ LI +Y KEG ++ A + + GF+ YT +++ + K + M+
Sbjct: 166 FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 225
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLP 359
G N+ +N +++ L +G + A N+ + ME V TY+++++ CK R
Sbjct: 226 DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 285
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+A +L+ + G+ +D L + +A + K+R IS
Sbjct: 286 AAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMIS 335
>gi|334182559|ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
gi|332190929|gb|AEE29050.1| PPR repeat-containing protein [Arabidopsis thaliana]
Length = 798
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 174/340 (51%), Gaps = 9/340 (2%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
TY++++ G R L ++ L I P V S+NS+M +LG D A F +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
+ L P + NI++NGLC AL + + KHG P+ VTYNIL KG G +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 153 RTARWILKELGDSGHAPNAITYTTIM--KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
A +++++ D G +P+ ITYT ++ +C N +GL +L M +G+ + C
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN--IDMGLVLLKDMLSRGFELNSIIPC 366
Query: 211 TV-IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
+V ++ K GR+ EA QM DG+ D+V+Y+ +I+ CK GK + A L DEM
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 329
+ + TH L+ GLC+ G + AR L+ + G ++ YN ++D K G I+
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 330 AINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 365
A+ +F E+ T++S+++ CK + + A K+L
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 184/392 (46%), Gaps = 26/392 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C S + + M + G+ PD VTYN L G ++S + +++ +ML+
Sbjct: 262 ILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK 321
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-----GDLTPCTATFNIMLNGLCKNR 115
G+ PDV +Y L+ QLG D + +DM+ + PC+ +ML+GLCK
Sbjct: 322 GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS----VMLSGLCKTG 377
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D AL +F ++ G P+LV Y+I+I GLCK G+ A W+ E+ D PN+ T+
Sbjct: 378 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
++ + +L ++ G T D Y VI + K G ++EA + + ++
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G+ + ++N+LI YCK + A +LD ++ G ++T L+D GN K
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK---IDHAI--NVFE-------SMEVK--- 340
M G Y+ I L + K +H + +FE ME +
Sbjct: 558 DELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 617
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
D TY++++ LC+ K L S + + L +KS
Sbjct: 618 PDQITYNTIIQYLCRVKHL-SGAFVFLEIMKS 648
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 197/433 (45%), Gaps = 40/433 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ C+ D ++ N+M+ G+SPD+V Y+ +I G + +L L DEM +
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P+ ++ +L+ L Q G EA + +I T +NI+++G K+ + A
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F+ + + G P + T+N LI G CK + AR IL + G AP+ ++YTT+M
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ--------- 231
K E+ MK +G Y + + + + + +
Sbjct: 548 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 607
Query: 232 ---MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
M ++G+ D ++YNT+I C+ L A++ L+ M+ + + T+ ILID LC
Sbjct: 608 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCV 667
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-------EVKD 341
G I+ A + + + + AY ++ G + A+ +F + ++D
Sbjct: 668 YGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRD 727
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCL---KSGVRILKSAQKAVVD-GLRHSGCRREAK 397
YS++++ LC+ + L++C +GV L S +++ V + + CRR
Sbjct: 728 ---YSAVINRLCR--------RHLMNCFPGQSNGVCCLISNERSFVYCPILSANCRRHTL 776
Query: 398 KIQSKIRMAKISH 410
++ K+SH
Sbjct: 777 SVE------KLSH 783
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 186/434 (42%), Gaps = 56/434 (12%)
Query: 14 AGYTILNRMREAGISPDVVTYNSLIAGATR---------------------NSLLSCS-- 50
+ ++ M + G+SPDV+TY L+ G + NS++ CS
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 51 -------------LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 97
L L ++M G+ PD+ +Y+ ++H L +LGK D A ++ +M +
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 98 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 157
P + T +L GLC+ A + L G ++V YNI+I G K+G + A
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 489
Query: 158 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 217
+ K + ++G P+ T+ +++ + + +IL +K G Y T++ A+
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE----------- 266
G K + +M +G+ V+Y+ + C+ K E +L E
Sbjct: 550 NCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLR 609
Query: 267 -MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
ME +G D+ T+ +I LC+ ++ GA + LE M D++ YN ++D L G
Sbjct: 610 DMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYG 669
Query: 326 KIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
I A + S++ ++ F Y++++ C A KL L G +
Sbjct: 670 YIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYS 729
Query: 382 AVVDGLRHSGCRRE 395
AV++ L CRR
Sbjct: 730 AVINRL----CRRH 739
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 138/328 (42%), Gaps = 53/328 (16%)
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW-ILKELGDSGHAPNAIT 173
R D++L + + ++ +YN ++ + ++ W + KE+ D N T
Sbjct: 138 RMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKM----WDVYKEIKDK----NEHT 189
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
Y+T++ R +K + + L + K + ++++ + K+G + A + ++
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY---------------- 277
G+ + S+N LIN C G + A L +M K G E D
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 278 -------------------THTILIDGLCKAGNIKGARLHLEYMNKIGFDSN-LEAYNCI 317
T+TIL+ G C+ GNI + L+ M GF+ N + + +
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 318 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ L K G+ID A+++F M+ D YS ++H LCK + A L L
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA--LWLYDEMCDK 427
Query: 374 RILKSAQK--AVVDGLRHSGCRREAKKI 399
RIL +++ A++ GL G EA+ +
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSL 455
>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g13630
Length = 826
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 174/340 (51%), Gaps = 9/340 (2%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
TY++++ G R L ++ L I P V S+NS+M +LG D A F +
Sbjct: 231 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 290
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
+ L P + NI++NGLC AL + + KHG P+ VTYNIL KG G +
Sbjct: 291 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 350
Query: 153 RTARWILKELGDSGHAPNAITYTTIM--KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
A +++++ D G +P+ ITYT ++ +C N +GL +L M +G+ + C
Sbjct: 351 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN--IDMGLVLLKDMLSRGFELNSIIPC 408
Query: 211 TV-IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
+V ++ K GR+ EA QM DG+ D+V+Y+ +I+ CK GK + A L DEM
Sbjct: 409 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 468
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 329
+ + TH L+ GLC+ G + AR L+ + G ++ YN ++D K G I+
Sbjct: 469 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 528
Query: 330 AINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 365
A+ +F E+ T++S+++ CK + + A K+L
Sbjct: 529 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 568
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 184/392 (46%), Gaps = 26/392 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C S + + M + G+ PD VTYN L G ++S + +++ +ML+
Sbjct: 304 ILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK 363
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-----GDLTPCTATFNIMLNGLCKNR 115
G+ PDV +Y L+ QLG D + +DM+ + PC+ +ML+GLCK
Sbjct: 364 GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS----VMLSGLCKTG 419
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D AL +F ++ G P+LV Y+I+I GLCK G+ A W+ E+ D PN+ T+
Sbjct: 420 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 479
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
++ + +L ++ G T D Y VI + K G ++EA + + ++
Sbjct: 480 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 539
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G+ + ++N+LI YCK + A +LD ++ G ++T L+D GN K
Sbjct: 540 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 599
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK---IDHAI--NVFE-------SMEVK--- 340
M G Y+ I L + K +H + +FE ME +
Sbjct: 600 DELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 659
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
D TY++++ LC+ K L S + + L +KS
Sbjct: 660 PDQITYNTIIQYLCRVKHL-SGAFVFLEIMKS 690
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 179/388 (46%), Gaps = 24/388 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ C+ D ++ N+M+ G+SPD+V Y+ +I G + +L L DEM +
Sbjct: 410 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 469
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P+ ++ +L+ L Q G EA + +I T +NI+++G K+ + A
Sbjct: 470 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 529
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F+ + + G P + T+N LI G CK + AR IL + G AP+ ++YTT+M
Sbjct: 530 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 589
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ--------- 231
K E+ MK +G Y + + + + + +
Sbjct: 590 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 649
Query: 232 ---MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
M ++G+ D ++YNT+I C+ L A++ L+ M+ + + T+ ILID LC
Sbjct: 650 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCV 709
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-------EVKD 341
G I+ A + + + + AY ++ G + A+ +F + ++D
Sbjct: 710 YGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRD 769
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCL 369
YS++++ LC+ + L + SK CL
Sbjct: 770 ---YSAVINRLCR-RHLVNESKFFF-CL 792
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 186/433 (42%), Gaps = 56/433 (12%)
Query: 14 AGYTILNRMREAGISPDVVTYNSLIAGATR---------------------NSLLSCS-- 50
+ ++ M + G+SPDV+TY L+ G + NS++ CS
Sbjct: 352 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 411
Query: 51 -------------LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 97
L L ++M G+ PD+ +Y+ ++H L +LGK D A ++ +M +
Sbjct: 412 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 471
Query: 98 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 157
P + T +L GLC+ A + L G ++V YNI+I G K+G + A
Sbjct: 472 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 531
Query: 158 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 217
+ K + ++G P+ T+ +++ + + +IL +K G Y T++ A+
Sbjct: 532 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 591
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE----------- 266
G K + +M +G+ V+Y+ + C+ K E +L E
Sbjct: 592 NCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLR 651
Query: 267 -MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
ME +G D+ T+ +I LC+ ++ GA + LE M D++ YN ++D L G
Sbjct: 652 DMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYG 711
Query: 326 KIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
I A + S++ ++ F Y++++ C A KL L G +
Sbjct: 712 YIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYS 771
Query: 382 AVVDGLRHSGCRR 394
AV++ L CRR
Sbjct: 772 AVINRL----CRR 780
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 141/310 (45%), Gaps = 16/310 (5%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++L+ + +G + D+V YN +I G ++ + +L+L ++E GI P V ++NSL++
Sbjct: 496 SLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGY 555
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL--CKNRYTDNALRMFRGLQKHGFVP 134
+ EA ++ + L P ++ +++ C N + + LR R ++ G P
Sbjct: 556 CKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR--REMKAEGIPP 613
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKE------------LGDSGHAPNAITYTTIMKCCF 182
VTY+++ KGLC+ + +L+E + G P+ ITY TI++
Sbjct: 614 TNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLC 673
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
R + L MK + Y +I + G +++A ++ + V L
Sbjct: 674 RVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKF 733
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
+Y TLI +C +G E A L ++ +GF ++ +I+ LC+ + ++ M
Sbjct: 734 AYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLM 793
Query: 303 NKIGFDSNLE 312
G +L+
Sbjct: 794 LSQGISPDLD 803
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 138/328 (42%), Gaps = 53/328 (16%)
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW-ILKELGDSGHAPNAIT 173
R D++L + + ++ +YN ++ + ++ W + KE+ D N T
Sbjct: 180 RMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKM----WDVYKEIKDK----NEHT 231
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
Y+T++ R +K + + L + K + ++++ + K+G + A + ++
Sbjct: 232 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 291
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY---------------- 277
G+ + S+N LIN C G + A L +M K G E D
Sbjct: 292 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 351
Query: 278 -------------------THTILIDGLCKAGNIKGARLHLEYMNKIGFDSN-LEAYNCI 317
T+TIL+ G C+ GNI + L+ M GF+ N + + +
Sbjct: 352 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 411
Query: 318 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ L K G+ID A+++F M+ D YS ++H LCK + A L L
Sbjct: 412 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA--LWLYDEMCDK 469
Query: 374 RILKSAQK--AVVDGLRHSGCRREAKKI 399
RIL +++ A++ GL G EA+ +
Sbjct: 470 RILPNSRTHGALLLGLCQKGMLLEARSL 497
>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 156/294 (53%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ +C F ++++++ G P+VV YN++I ++ +LD+L M +MG
Sbjct: 155 LVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMG 214
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV +YNSL+ LF G + R+ DM+ ++P TF+ +++ K A
Sbjct: 215 IRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAK 274
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + + P +VTYN LI GLC G L A+ +L L G PNA+TY T++
Sbjct: 275 KQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGY 334
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ G++IL M R G D F Y T+ + + G+ A + +MV+ GV D+
Sbjct: 335 CKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDM 394
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
++N L++ C GK+ A + L++++K T+ I+I GLCKA ++ A
Sbjct: 395 YTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDA 448
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 195/407 (47%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + ++A ++ + GIS D+ ++ +LI R + LS +L L +M+++G
Sbjct: 85 LLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLG 144
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + ++ SL++ + + EA + ++ P +N +++ LC+ + AL
Sbjct: 145 FEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTAL 204
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + ++K G P++VTYN LI L +G + IL ++ G +P+ IT++ ++
Sbjct: 205 DVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVY 264
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + + M ++ + Y ++I G L EA + +V+ G +
Sbjct: 265 GKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNA 324
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTLIN YCK +++ +L M + G + D +T+ L G C+AG A L
Sbjct: 325 VTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGR 384
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G ++ +N ++D L GKI A+ E ++ V TY+ ++ LCKA +
Sbjct: 385 MVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADK 444
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A L S GV ++ GLR REA ++ K++
Sbjct: 445 VEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQ 491
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 102/199 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C D +LN + G P+ VTYN+LI G + + + +L M G
Sbjct: 295 LINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDG 354
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D ++YN+L Q GK A +V M+ + P TFNI+L+GLC + AL
Sbjct: 355 VDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKAL 414
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
LQK V ++TYNI+IKGLCKA ++ A ++ L G +P+ ITY T+M
Sbjct: 415 VRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGL 474
Query: 182 FRNRKYKLGLEILSAMKRK 200
R R ++ E+ M+++
Sbjct: 475 RRKRLWREAHELYRKMQKE 493
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 81/201 (40%), Gaps = 31/201 (15%)
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
+ ++ A K+ + + + G+ D+ S+ TLI+ +C+ +L A L +M
Sbjct: 82 FSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMM 141
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
K GFE T L++G C A ++ + +G++ N+ YN I+D
Sbjct: 142 KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIID--------- 192
Query: 329 HAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
+LC+ ++ +A +L K G+R +++ L
Sbjct: 193 ----------------------SLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLF 230
Query: 389 HSGCRREAKKIQSKIRMAKIS 409
HSG + +I S + IS
Sbjct: 231 HSGTWGVSARILSDMMRMGIS 251
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 189/411 (45%), Gaps = 4/411 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ A C+ + D L +M + P+ TYN+LI G + ++ + EM
Sbjct: 260 VVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 319
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV + + LM L + GK EA VF M P ++NIMLNG +
Sbjct: 320 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT 379
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + G P+ T+N+LIK G L A I E+ D G P+ +TY T++
Sbjct: 380 DLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 439
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R K +E + M +G D + Y +I F G L +A + + +++ +G+ LDI
Sbjct: 440 CRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 499
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V ++++IN CK G++ A + D G D +++L+DG C G ++ A +
Sbjct: 500 VFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDA 559
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G + N+ Y +V+ K G+ID +++F M + + YS ++ L +A R
Sbjct: 560 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR 619
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
A +SG+ + V+ GL + C EA + ++R +
Sbjct: 620 TVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNV 670
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 203/411 (49%), Gaps = 6/411 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG-ATRNSLLSCSLDLLDEMLE 59
ML+ + C++ + + M G +PDV +YN ++ G AT+ L+ + DL D ML
Sbjct: 329 MLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT-DLFDLMLG 387
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
GI PD +++N L+ G D+A +F +M + P T+ ++ LC+ D+
Sbjct: 388 DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD 447
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+ F + G P+ YN LI+G C G L A+ ++ E+ ++G + + +++I+
Sbjct: 448 AMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 507
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + I G D Y ++ + +G++++A + MV+ G++
Sbjct: 508 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 567
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
++V Y TL+N YCK G+++ L EM ++G + ++I+IDGL +AG A++
Sbjct: 568 NVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKF 627
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE---SMEVK-DSFTYSSMVHNLCKA 355
M + G ++ YN ++ L K+ D AI +F+ +M VK + T ++M+ + +
Sbjct: 628 HEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQT 687
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
+R+ A L S +S + ++ L G EA+ + S ++ A
Sbjct: 688 RRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 738
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 178/392 (45%), Gaps = 7/392 (1%)
Query: 2 LIDAYCQFVSFDAGYTIL-NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L++ +C+ D IL +R E G PDV +Y+ L+ + DLL M E
Sbjct: 152 LLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 211
Query: 61 GI--PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G P+V +YN+++ F+ G ++A +F++M+ + P T+N +++ LCK R D
Sbjct: 212 GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMD 271
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A R + +P TYN LI G G+ + A + KE+ P+ +T + +M
Sbjct: 272 KAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 331
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ K K ++ M KG D F Y ++ + G L + TD + M+ DG+
Sbjct: 332 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 391
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D ++N LI Y G L+ A ++ +EM G + D T+ +I LC+ G + A
Sbjct: 392 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 451
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
M G + AYNC++ G + A + + D +SS+++NLCK
Sbjct: 452 FNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK 511
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
R+ A + + G+ ++DG
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDG 543
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 168/384 (43%), Gaps = 42/384 (10%)
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P +Y LM C + +P+ A F ++ L N +L G C+ + TD AL
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166
Query: 122 R-MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH--APNAITYTTIM 178
+ + G VP++ +Y+IL+K LC G+ A +L+ + + G +PN + Y T++
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 226
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
F+ ++ M ++G D Y +V+ A K + +A ++ QMV V
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 286
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+ +YN LI Y G+ + A + EM + D T ++L+ LCK G IK AR
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346
Query: 299 LEYMNKIGFDSNLEAYN----------CIVDR-----------LGKD------------- 324
+ M G + ++ +YN C+VD + D
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 406
Query: 325 -GKIDHAINVFESME---VK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
G +D A+ +F M VK D TY +++ LC+ ++ A + + GV K A
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 466
Query: 380 QKAVVDGLRHSGCRREAKKIQSKI 403
++ G G +AK++ S+I
Sbjct: 467 YNCLIQGFCTHGSLLKAKELISEI 490
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 42/248 (16%)
Query: 168 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
+P + TY +M CC R + +L L FG
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAF-------------FG------------------- 135
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKL-EAAYLLLDEMEKQGFECDKYTHTILIDGL 286
Q++ G++++I+ N L+ +C+ + EA +LL + G D ++++IL+ L
Sbjct: 136 ---QLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSL 192
Query: 287 CKAGNIKGARLHLEYMNKIGF--DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 340
C G A L M + G N+ AYN ++D K+G ++ A ++F+ M +
Sbjct: 193 CDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPP 252
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 400
D TY+S+VH LCKA+ + A L + V ++ G +G +EA ++
Sbjct: 253 DLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVF 312
Query: 401 SKIRMAKI 408
++R I
Sbjct: 313 KEMRRHSI 320
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 181/373 (48%), Gaps = 8/373 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D Y + + + R++E G +P V+TY LI T+ +S +L++ M +G
Sbjct: 440 MMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVG 499
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I ++ +Y+ L++ +L A VF+D+I L P +N ++ C D A+
Sbjct: 500 IKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAI 559
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + +QK P T+ +I G +AG +R A I + SG P T+ ++
Sbjct: 560 HMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGL 619
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
RK + +EIL M G + D Y T++ + +G +A +Y +M +G+QLD+
Sbjct: 620 VEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDV 679
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y L+ CK G++++A + EM Q + + + ILIDG + G+I A ++
Sbjct: 680 FTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQ 739
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSF-TYSSMVHNLCKAKR 357
MN+ G ++ Y ++ K G + A E ME VK + TY++++H A
Sbjct: 740 MNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANAS- 798
Query: 358 LPSASKLLLSCLK 370
LP + LSC +
Sbjct: 799 LPEKA---LSCFE 808
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 177/377 (46%), Gaps = 4/377 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I AYCQ + D ++ M E GI + Y++++ G T L + + E G
Sbjct: 405 IIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECG 464
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y L++ ++GK +A V + M + T+++++NG K + NA
Sbjct: 465 FAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAF 524
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + K G P++V YN +IK C G + A ++KE+ P + T+ I+
Sbjct: 525 AVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGF 584
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + + LEI M+R G + ++ V+ ++++A + +++M GV D
Sbjct: 585 ARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDE 644
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y T+++ Y G A+ +M +G + D +T+ L+ CK+G ++ A
Sbjct: 645 HTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTRE 704
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
MN N YN ++D + G I A ++ + M + D TY+S ++ CKA
Sbjct: 705 MNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGD 764
Query: 358 LPSASKLLLSCLKSGVR 374
+ A+K + +GV+
Sbjct: 765 MLRATKTMEEMEAAGVK 781
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 146/321 (45%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLI+ + + + + + + + G+ PDVV YN++I + ++ ++ EM +
Sbjct: 509 MLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKE 568
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P ++ ++H + G+ A +F M P TFN ++ GL + R + A
Sbjct: 569 RCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKA 628
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + G P+ TY ++ G G A ++ + G + TY ++K
Sbjct: 629 VEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKA 688
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C ++ + + L + M + + F Y +I + + G + EA D M+QM +GVQ D
Sbjct: 689 CCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPD 748
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I +Y + IN CK G + A ++EME G + + T+T LI G A + A E
Sbjct: 749 IHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFE 808
Query: 301 YMNKIGFDSNLEAYNCIVDRL 321
+ G + Y+C++ L
Sbjct: 809 ELKLAGLKPDKAVYHCLMTSL 829
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 145/333 (43%), Gaps = 4/333 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
MR GI P Y SLI + +L + +M E GI + +Y+ ++ + G
Sbjct: 320 MRARGIDPSSHVYTSLIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGN 379
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
+ A+ F+ + ++ C+ D A + R +++ G L Y+
Sbjct: 380 AEAADCWFKKAKERHTNLNAYIYGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHT 439
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
++ G + K L + G AP+ ITY ++ + K LE+ MK G
Sbjct: 440 MMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVG 499
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ Y +I F+K+ A E ++ DG++ D+V YN +I +C G ++ A
Sbjct: 500 IKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAI 559
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
++ EM+K+ T +I G +AG ++ A + M + G + +N +V L
Sbjct: 560 HMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGL 619
Query: 322 GKDGKIDHAINVFESMEV----KDSFTYSSMVH 350
+ K++ A+ + + M + D TY++++H
Sbjct: 620 VEKRKMEKAVEILDEMALAGVSPDEHTYTTIMH 652
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 145/338 (42%), Gaps = 12/338 (3%)
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
G A + F+ M + P + + +++ R + AL R + + G LVTY
Sbjct: 308 GDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTY 367
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM----KCCFRNRKYKLGLEILS 195
+I++ G K G A K+ + NA Y I+ + C +R L E
Sbjct: 368 SIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQACNMDRAEALVRE--- 424
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M+ +G Y T++ + I ++ +++ G +++Y LIN+Y K G
Sbjct: 425 -MEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIG 483
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
K+ A + M+ G + + T+++LI+G K + A E + K G ++ YN
Sbjct: 484 KVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYN 543
Query: 316 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
I+ G +D AI++ + M+ + S T+ ++H +A + A ++ +S
Sbjct: 544 NIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRS 603
Query: 372 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
G A+V GL +A +I ++ +A +S
Sbjct: 604 GCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVS 641
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 108/245 (44%), Gaps = 4/245 (1%)
Query: 134 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 193
P + +++ + G + AR + + G P++ YT+++ R + L
Sbjct: 292 PSRREFGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSC 351
Query: 194 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 253
+ M +G Y V+ F K G + A + ++ L+ Y +I YC+
Sbjct: 352 VRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQ 411
Query: 254 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
++ A L+ EME++G + + ++DG N + + + + + GF ++
Sbjct: 412 ACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVIT 471
Query: 314 YNCIVDRLGKDGKIDHAINV---FESMEVKDSF-TYSSMVHNLCKAKRLPSASKLLLSCL 369
Y C+++ K GK+ A+ V +S+ +K + TYS +++ K K +A + +
Sbjct: 472 YGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVI 531
Query: 370 KSGVR 374
K G++
Sbjct: 532 KDGLK 536
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 147/271 (54%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ +C+ ++ + + + G+ P VV++N+L+ G R L L M
Sbjct: 141 IVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHAS 200
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K DEAN +F +M+ L P TF +++ CKN D+A
Sbjct: 201 GVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSA 260
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + GF P+L+TYN LI GLCK G L+ R ++ E+ +G P+ ITYTT++
Sbjct: 261 MEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDG 320
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + + E M ++ D Y +++ + GR +A +M++ G++ D
Sbjct: 321 CCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPD 380
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+Y +IN +CK+G + A LL EM++ G
Sbjct: 381 NGTYTMIINEFCKKGDVRTASRLLKEMQRDG 411
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 140/287 (48%)
Query: 52 DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 111
D E+LE G P ++ +N +MH + G+ A VF + L P +FN ++NG
Sbjct: 122 DFYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGY 181
Query: 112 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 171
+ D R+ + G P++ TY++LI GLCK ++ A + E+ D G PN
Sbjct: 182 IRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNG 241
Query: 172 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 231
+T+TT++ +N +EI M +G++ D Y T+I K G LK+ +++
Sbjct: 242 VTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDE 301
Query: 232 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
M +G++ D ++Y TLI+ CKEG LE A+ M K+ D +T L+ GLC+ G
Sbjct: 302 MSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGR 361
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A M +G + Y I++ K G + A + + M+
Sbjct: 362 ADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQ 408
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 147/295 (49%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N ++ + + + + D + + G+ P V S+N+
Sbjct: 117 FKLVWDFYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNT 176
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M + P T+++++NGLCK D A +F + G
Sbjct: 177 LMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRG 236
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP VT+ LI CK G + +A I K++ G +P+ ITY T++ + K
Sbjct: 237 LVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVR 296
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
++ M G D Y T+I K G L+ A ++ ++M+ + ++LD V+Y L++
Sbjct: 297 ALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGL 356
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
C+EG+ + A + EM G + D T+T++I+ CK G+++ A L+ M + G
Sbjct: 357 CQEGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDG 411
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 161/345 (46%), Gaps = 6/345 (1%)
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 124
D++ ++ LM + G +A + F+ T +L L K +Y +
Sbjct: 65 DIYVFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWDFY 124
Query: 125 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
+ + + G+ L +NI++ CK G +R A+ + + G P+ +++ T+M R
Sbjct: 125 KEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRL 184
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
G + SAM G D + Y +I K ++ EA + +M+ G+ + V++
Sbjct: 185 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTF 244
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
TLI+++CK G +++A + +M QGF D T+ LI GLCK G++K R ++ M+
Sbjct: 245 TTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSM 304
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAIN-----VFESMEVKDSFTYSSMVHNLCKAKRLP 359
G + Y ++D K+G ++ A + ES+ + D+ Y+++V LC+ R
Sbjct: 305 NGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRL-DNVAYTALVSGLCQEGRAD 363
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
A K+ L G++ +++ G R A ++ +++
Sbjct: 364 DAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQ 408
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 89/172 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ D+ I +M G SPD++TYN+LI G + L L+DEM G
Sbjct: 247 LIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y +L+ + G + A + MI + + +++GLC+ D+A
Sbjct: 307 LKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAE 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+MFR + G P+ TY ++I CK G +RTA +LKE+ GH P +T
Sbjct: 367 KMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVPCVVT 418
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 98/202 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ D + N M + G+ P+ VT+ +LI +N ++ ++++ +ML
Sbjct: 211 VLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQ 270
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN+L++ L + G + + +M L P T+ +++G CK + A
Sbjct: 271 GFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETA 330
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K + V Y L+ GLC+ GR A + +E+ G P+ TYT I+
Sbjct: 331 FEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIINE 390
Query: 181 CFRNRKYKLGLEILSAMKRKGY 202
+ + +L M+R G+
Sbjct: 391 FCKKGDVRTASRLLKEMQRDGH 412
>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 418
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 142/284 (50%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E LE G P ++ +N LMH + G+ A VF + L P +FN ++NG K
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ +Q G P++ TY++LI GLCK ++ A + E+ D+G PN +T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A D +++M
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG LE A+ M K+ D +T LI GLC+ G
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K G + + + M+
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 139/256 (54%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + + + + P VV++N+L+ G + L L + M G+ PDV++Y+ L++ L
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ K D+AN +F +M+ L P TF +++G CKN D A+ +++ + +L
Sbjct: 217 CKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADL 276
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+TYN LI GLCK G L+ A+ ++ E+ G P+ ITYTT++ + + E
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKR 336
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M ++ D Y +I+ + GR +A + +M++ G++ +I +Y +IN +CK+G
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396
Query: 257 LEAAYLLLDEMEKQGF 272
+ LL EM++ G+
Sbjct: 397 VWTGSKLLKEMQRDGY 412
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 145/284 (51%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + + P V S+N+LM+ +LG D
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M + P T+++++NGLCK D+A +F + +G VP VT+ LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I K++ + + ITY T++ + K +++ M KG
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A +Y ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
L EM G + + T+T++I+ CK G++ L+ M + G+
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 124/271 (45%), Gaps = 31/271 (11%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
FNI+++ K A +F + K P +V++N L+ G K G L + +
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
SG P+ TY+ ++ + K E+ M G +G + T+I K GR+
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A + +QM++ + D+++YNTLI CK+G L+ A L+DEM +G + DK T+T LI
Sbjct: 259 LAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF 343
DG CK G+++ A EY ++ I I + D
Sbjct: 319 DGNCKEGDLETA---FEYRKRM---------------------IKENIRL-------DDV 347
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 348 AYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 137/300 (45%), Gaps = 4/300 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F+ ++ ++ + +A+ +R ++H F T +++ L K + +E
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+ G+ + + +M + + +L + A+ + + T++ ++K+G L
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
E M GVQ D+ +Y+ LIN CKE K++ A L DEM G + T T LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
DG CK G + A + M ++L YN ++ L K G + A ++ + M +K
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D TY++++ CK L +A + +K +R+ A A++ GL G +A+K+
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 39/238 (16%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ Y + D G+ + N M+ +G+ PDV TY+ LI G + S + + +L DEML+ G
Sbjct: 177 LMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNG 236
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ P+ ++ +L+ HC + G+ D A +++ M+ L+ T+N ++ GLCK
Sbjct: 237 LVPNGVTFTTLIDGHC--KNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQ 294
Query: 120 ALRMFRGLQKHGFVPELVTYNIL-----------------------------------IK 144
A + + G P+ +TY L I
Sbjct: 295 AQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALIS 354
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
GLC+ GR A +L+E+ G P TYT I+ + G ++L M+R GY
Sbjct: 355 GLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 178/355 (50%), Gaps = 3/355 (0%)
Query: 23 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 82
+E G+ D VTYN+LI T++ +L L + E G D Y++++H L + G+
Sbjct: 378 KEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRM 437
Query: 83 DEANRVFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
EA + +M+ G P T+ ++NG C+ D A ++ + + HG+ P V+Y
Sbjct: 438 SEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTA 497
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
L+ GLC+ G+ AR ++ + +PN+ITY+ +M + K +++ M KG
Sbjct: 498 LLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKG 557
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ ++ + + GR EA +ME+ + G +++V++ T+I+ +C+ +L+AA
Sbjct: 558 FFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAAL 617
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+LD+M D +T+T L+D L K G I A ++ M G D Y ++ R
Sbjct: 618 SVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRY 677
Query: 322 GKDGKIDHAINVFESMEVKDS--FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
+ K+D + + E M ++ Y+ ++ LC +L A KLL L++ R
Sbjct: 678 CQMEKVDDLVAILEKMILRQKCKTIYNQVIEKLCGLGKLEEADKLLGKVLRTASR 732
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 175/364 (48%), Gaps = 6/364 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L M+ GI + ++ +R L +L +L M G+ P++ N+ +
Sbjct: 232 VLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFV 291
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ + ++A R + M + P T+N M+ G C + A+ + + G +P+ V
Sbjct: 292 RANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKV 351
Query: 138 TYNILIKGLCKAGRLRTARWILKELG-DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+Y ++ LCK R+ R ++K++ + G + +TY T++ ++ L L
Sbjct: 352 SYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKD 411
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG-VQLDIVSYNTLINLYCKEG 255
+ KG+ D GY ++ A K GR+ EA D + +M++ G D+V+Y ++N +C+ G
Sbjct: 412 AEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLG 471
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
+++ A LL M G++ + ++T L++GLC+ G AR + + + N Y+
Sbjct: 472 EVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYS 531
Query: 316 CIVDRLGKDGKIDHAINVFESMEVKDSFT----YSSMVHNLCKAKRLPSASKLLLSCLKS 371
++ L K+GK+ A +V M +K F + ++ +LC+ R A K + CL
Sbjct: 532 VLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNK 591
Query: 372 GVRI 375
G I
Sbjct: 592 GCAI 595
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 176/397 (44%), Gaps = 41/397 (10%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
ID + + + L RM+ GI P+VVTYN +I G + +++LLD+M G
Sbjct: 287 IDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGC 346
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD-LTPCTATFNIMLNGLCKNRYTDNAL 121
PD SY ++M L + + E + + M L T+N +++ L K+ + D AL
Sbjct: 347 LPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEAL 406
Query: 122 RMFRGLQKHGF------------------------------------VPELVTYNILIKG 145
+ ++ GF P++VTY ++ G
Sbjct: 407 WFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNG 466
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
C+ G + A+ +L+ + G+ PN ++YT ++ R K E+++ + + ++ +
Sbjct: 467 FCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPN 526
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y ++ K G+L EA D + +MV G V N L+ C++G+ A ++
Sbjct: 527 SITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFME 586
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
E +G + T +I G C+ + A L+ M I +++ Y +VD LGK G
Sbjct: 587 ECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKG 646
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 358
+I A + + M K TY +++H C+ +++
Sbjct: 647 RIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKV 683
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 155/319 (48%), Gaps = 38/319 (11%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNS 71
D L E G D V Y++++ + +S + DL++EML G PPDV +Y +
Sbjct: 403 DEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTA 462
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK----------------NR 115
+++ +LG+ D+A ++ Q M P T ++ +LNGLC+
Sbjct: 463 VVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQW 522
Query: 116 YTDNALR---MFRGLQKH----------------GFVPELVTYNILIKGLCKAGRLRTAR 156
++ N++ + GL+K GF P V N+L++ LC+ GR AR
Sbjct: 523 WSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEAR 582
Query: 157 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 216
++E + G A N + +TT++ +N + L +L M D F Y T++ A
Sbjct: 583 KFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDAL 642
Query: 217 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
K GR+ EAT+ M++M+ G+ V+Y T+I+ YC+ K++ +L++M + +C K
Sbjct: 643 GKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMILRQ-KC-K 700
Query: 277 YTHTILIDGLCKAGNIKGA 295
+ +I+ LC G ++ A
Sbjct: 701 TIYNQVIEKLCGLGKLEEA 719
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 138/299 (46%), Gaps = 6/299 (2%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
ML L K + A R+ +++ G + ++ +AG+LR A +L + +G
Sbjct: 216 MLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAG 275
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
PN + T + R + + L L M+ G + Y +I + + R++EA
Sbjct: 276 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 335
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ-GFECDKYTHTILIDG 285
+ ++ M + G D VSY T++ CKE ++ L+ +M K+ G D+ T+ LI
Sbjct: 336 ELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHM 395
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----- 340
L K + A L+ + GF + Y+ IV L K+G++ A ++ M K
Sbjct: 396 LTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPP 455
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D TY+++V+ C+ + A KLL G + + A+++GL +G EA+++
Sbjct: 456 DVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREM 514
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 106/246 (43%), Gaps = 42/246 (17%)
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY--TFDGF-----GYC--------- 210
H P + Y ++++ + + + +L MKR+G T + F Y
Sbjct: 208 HDP--MVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDAL 265
Query: 211 -------------------TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
T I FV+ RL++A ++E+M G+ ++V+YN +I Y
Sbjct: 266 KVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 325
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI-GFDSN 310
C ++E A LLD+M +G DK ++ ++ LCK I R ++ M K G +
Sbjct: 326 CDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRD 385
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
YN ++ L K D A+ + E K D YS++VH LCK R+ A L+
Sbjct: 386 QVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLIN 445
Query: 367 SCLKSG 372
L G
Sbjct: 446 EMLSKG 451
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 4/168 (2%)
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
Y D Y +++ K + A + M G+ ++ ++ Y + G+L A
Sbjct: 206 YRHDPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDAL 265
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+L M++ G E + ID +A ++ A LE M +G N+ YNC++
Sbjct: 266 KVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 325
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
+++ AI + + M K D +Y +++ LCK KR+ L+
Sbjct: 326 CDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLM 373
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 199/416 (47%), Gaps = 7/416 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ +CQ + L ++ + G PD+ T+ SLI G + + ++ ++++M+EM
Sbjct: 111 LLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEM 170
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PDV Y +++ L + G D A +F M + P + ++NGLC + +A
Sbjct: 171 GIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 230
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ RG+ K P+++T+N LI K G+L A+ + E+ APN TYT+++
Sbjct: 231 DLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLING 290
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ M+ KG D Y ++I F K ++++A +M G+ +
Sbjct: 291 LCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGN 350
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++Y TLI + GK A + M +G + T+ +L+ LC G + A + E
Sbjct: 351 TITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFE 410
Query: 301 YMNKI---GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLC 353
M K G N+ YN ++ L +GK++ A+ VF M+ +D TY+ ++ +C
Sbjct: 411 DMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMC 470
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
KA ++ A L S GV+ ++ GL G EA + K++ +S
Sbjct: 471 KAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 181/367 (49%), Gaps = 7/367 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ + FD + ++ G+S D+ T N L+ ++S + L +++++G
Sbjct: 77 LLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLG 136
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD++++ SL++ + +EA + M+ + P + +++ LCKN + DNAL
Sbjct: 137 FEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNAL 196
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ +G P++V Y L+ GLC +GR R A +L+ + P+ IT+ ++
Sbjct: 197 SLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAF 256
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K E+ + M + + F Y ++I GRL EA M T G D+
Sbjct: 257 VKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDV 316
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y +LIN +CK K+E A + EM ++G + T+T LI G G A+ +
Sbjct: 317 VAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGH 376
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD-------SFTYSSMVHNLCK 354
M G N+ YN ++ L +GK++ A+ +FE M+ ++ TY+ ++H LC
Sbjct: 377 MVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCY 436
Query: 355 AKRLPSA 361
+L A
Sbjct: 437 NGKLEKA 443
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 176/382 (46%), Gaps = 15/382 (3%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
+ F+ + + M E+ P ++ + L+ + ++L + MG+ D+++
Sbjct: 50 LQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTC 109
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N LM+C Q +P A+ ++ P TF ++NG C + A+ M + +
Sbjct: 110 NLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVE 169
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G P++V Y +I LCK G + A + ++ + G P+ + YT+++ + +++
Sbjct: 170 MGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRD 229
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+L M ++ D + +I AFVK G+L +A + +M+ + +I +Y +LIN
Sbjct: 230 ADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLIN 289
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
C EG+L+ A + ME +G D +T LI+G CK ++ A M++ G
Sbjct: 290 GLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTG 349
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
N Y ++ G GK + A VF M + + TY+ ++H LC ++ A
Sbjct: 350 NTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKA---- 405
Query: 366 LSCLKSGVRILKSAQKAVVDGL 387
+ I + QK +DG+
Sbjct: 406 -------LMIFEDMQKREIDGV 420
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/284 (19%), Positives = 129/284 (45%), Gaps = 4/284 (1%)
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
AL R L +V Y +++ + + A + + +S P+ I +T ++
Sbjct: 20 ALSFSRLLGLSFWVRAFCNYREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLN 79
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ +K+ + + + ++ G + D + ++ F + + A+ ++ +++ G +
Sbjct: 80 VIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEP 139
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DI ++ +LIN +C ++E A ++++M + G + D +T +ID LCK G++ A
Sbjct: 140 DIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLF 199
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
M G ++ Y +V+ L G+ A + M + D T+++++ K
Sbjct: 200 NQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKE 259
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+L A +L ++ + ++++GL G EA+++
Sbjct: 260 GKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQM 303
>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 187/370 (50%), Gaps = 5/370 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I A+C+ + +++ + G+SP+++ Y+S+I+G + + + +LL+EM++
Sbjct: 284 LIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKN 343
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD-LTPCTATFNIMLNGLCKNRYTDN 119
G P+V+++ SL+H L + G + A R+F +I D P T+ M++G CK
Sbjct: 344 GWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSR 403
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +F +++ G VP TY LI G CKAG A +++ + + G PN TY +I+
Sbjct: 404 AEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVD 463
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + + ++L+ + DG Y +I+ K + +A ++ +M G Q
Sbjct: 464 GLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQP 523
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DI Y TLI +C++ ++ + L DE+ K G K T+T +I G C+ + A
Sbjct: 524 DIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFF 583
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKA 355
+ M+ G + +Y ++ L K+ ++D A ++++M K T ++ + CK
Sbjct: 584 QKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKT 643
Query: 356 KRLPSASKLL 365
+ SA +L
Sbjct: 644 EDFASAMVIL 653
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 191/413 (46%), Gaps = 42/413 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRN---------------- 44
+L+ A + V + AG + + M G+ PD TY +I G RN
Sbjct: 216 ILVAAEMRLVEY-AG-NVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMER 273
Query: 45 -------------------SLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
SL++ ++ ++ +MG+ P++ +Y+S++ L + G +A
Sbjct: 274 GFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQA 333
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF-RGLQKHGFVPELVTYNILIK 144
+ ++M+ P T +++GLCK +T+ A R+F + ++ + P + TY +I
Sbjct: 334 FELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMIS 393
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
G CK +L A + + + + G PN TYTT++ + + E++ M +G+
Sbjct: 394 GYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFP 453
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ Y +++ K GR +EA + + ++ D V+Y LI+ CK + A + L
Sbjct: 454 NTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFL 513
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
++M K GF+ D + +T LI C+ +K + + + K+G E Y ++ ++
Sbjct: 514 NKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCRE 573
Query: 325 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
K+ A+ F+ M DS +Y +++ LCK RL A +L + + G+
Sbjct: 574 KKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGL 626
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 164/357 (45%), Gaps = 38/357 (10%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
MR G+ N +I A L+ + ++ DEM G+ PD +Y ++ + G
Sbjct: 200 MRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGN 259
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
EA+R +M+ AT +++ C+ + A+ F + K G P L+ Y+
Sbjct: 260 VLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSS 319
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
+I GLCK G ++ A +L+E+ +G PN T+T+ ++ + +KG
Sbjct: 320 MISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTS----------------LIHGLCKKG 363
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+T F F+K+ R +D + ++ +Y +I+ YCKE KL A
Sbjct: 364 WTERAF------RLFLKLIR------------SDNYKPNVHTYTAMISGYCKEEKLSRAE 405
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+L + M++QG + T+T LIDG CKAGN A +E M+ GF N YN IVD L
Sbjct: 406 MLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGL 465
Query: 322 GKDGKIDHAINV----FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
K G+ + A + F++ D TY+ ++ CK + A L K G +
Sbjct: 466 CKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQ 522
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 135/290 (46%), Gaps = 11/290 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I YC+ + RM+E G+ P+ TY +LI G + S + +L++ M G
Sbjct: 391 MISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEG 450
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEA----NRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
P+ +YNS++ L + G+ +EA N FQ+ I D T+ I+++ CK
Sbjct: 451 FFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEAD----GVTYTILISEQCKRADM 506
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
+ AL + K GF P++ Y LI C+ ++ + + E+ G AP TYT++
Sbjct: 507 NQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSM 566
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ R +K L ++ M G D Y +I+ K RL EA + M+ G+
Sbjct: 567 ICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGL 626
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
V+ TL YCK +A ++L+ + K+ + + HT LI LC
Sbjct: 627 SPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLW--IRTVHT-LIRKLC 673
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 132/289 (45%), Gaps = 4/289 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HC 75
L +R P+V TY ++I+G + LS + L + M E G+ P+ +Y +L+ HC
Sbjct: 372 FLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHC 431
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
+ G +A + + M P T T+N +++GLCK + A ++ ++ +
Sbjct: 432 --KAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEAD 489
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
VTY ILI CK + A L ++ G P+ YTT++ R K ++
Sbjct: 490 GVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFD 549
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
+ + G Y ++I + + ++ A + ++M G D +SY LI+ CKE
Sbjct: 550 EVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKES 609
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
+L+ A L D M +G + T L CK + A + LE +NK
Sbjct: 610 RLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNK 658
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 35/200 (17%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ + LN+M + G PD+ Y +LIA R +++ S L DE++++
Sbjct: 495 ILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKL 554
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P +Y S MIC G C+ + A
Sbjct: 555 GLAPTKETYTS--------------------MIC---------------GYCREKKVSLA 579
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ F+ + HG P+ ++Y LI GLCK RL AR + + D G +P +T T+
Sbjct: 580 VKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYE 639
Query: 181 CFRNRKYKLGLEILSAMKRK 200
+ + + IL + +K
Sbjct: 640 YCKTEDFASAMVILERLNKK 659
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 41/200 (20%)
Query: 212 VIAAFVKIGRLKEATDYM-----------------------------------EQMVTDG 236
++ F +IG+LKEA D + ++M G
Sbjct: 180 MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 239
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
V D +Y +I YC+ G + A + EM ++GF D T T++I C+ + A
Sbjct: 240 VYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAV 299
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-----FTYSSMVHN 351
+ K+G NL Y+ ++ L K G + A + E M VK+ +T++S++H
Sbjct: 300 WFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEM-VKNGWKPNVYTHTSLIHG 358
Query: 352 LCKAKRLPSASKLLLSCLKS 371
LCK A +L L ++S
Sbjct: 359 LCKKGWTERAFRLFLKLIRS 378
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 150/285 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV+YN+L+ G R L L ML
Sbjct: 129 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 188
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN +F +M+ L P TF +++G CKN D A
Sbjct: 189 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 248
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + +P+L+TYN LI GLCK G L A ++ E+ G P+ TYTT++
Sbjct: 249 MEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDG 308
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + E M ++ D Y +I+ + GR +A + +M++ G++ D
Sbjct: 309 CCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPD 368
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y +IN +CK+G + LL EM++ G T+ +L++G
Sbjct: 369 TGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMNG 413
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 159/309 (51%), Gaps = 2/309 (0%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ ++ + + + D + + G+ P V SYN+
Sbjct: 105 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 164
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M+ + P T+++++NGLCK D+A +F + G
Sbjct: 165 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 224
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP VT+ LI G CK GR+ A I K++ P+ ITY T++ +
Sbjct: 225 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAH 284
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
++ M KG D F Y T+I K G L A ++ ++M+ + ++LD V+Y +I+
Sbjct: 285 GLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGL 344
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 310
C+EG+ A +L EM G + D T+T++I+ CK G++ KG++L L+ M + G +
Sbjct: 345 CQEGRPVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKL-LKEMQRNGHVPS 403
Query: 311 LEAYNCIVD 319
+ YN +++
Sbjct: 404 VXTYNVLMN 412
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 136/284 (47%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E+LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 113 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 172
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ + G P++ TY++LI GLCK ++ A + E+ G PN +T+
Sbjct: 173 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 232
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + D Y T+I K G L +A +++M
Sbjct: 233 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSM 292
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D +Y TLI+ CKEG L+AA+ M ++ D +T +I GLC+ G
Sbjct: 293 KGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVD 352
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K G + + + M+
Sbjct: 353 AEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQ 396
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 129/272 (47%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K RY + + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 95 VLEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 154
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ ++Y T+M R G + SAM G D + Y +I K ++ +A
Sbjct: 155 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 214
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ + V++ TLI+ +CK G+++ A + +M Q D T+ LI GL
Sbjct: 215 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 274
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++ A ++ M+ G + Y ++D K+G +D A + M + D
Sbjct: 275 CKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDD 334
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 335 VAYTAIISGLCQEGRPVDAEKMLREMLSVGLK 366
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 174/371 (46%), Gaps = 35/371 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +CQ + +RM++AG+ P + TYNSL+ G + + ++ L EM G
Sbjct: 407 LIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEG 466
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +Y +LM D A + +M ++ T+N+++NG+C
Sbjct: 467 FKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVD 526
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + GF+P ++TYN +I G KAG + +A + +++ + G PN ITYT+ +
Sbjct: 527 GMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGY 586
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR-------------------- 221
R + L++L+ ++R+G D Y +I F + G
Sbjct: 587 CRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNT 646
Query: 222 ---------------LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+KE + + E M+ G+ D +Y TLI+ + K+G + A L E
Sbjct: 647 VVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSE 706
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M +G+ D +T T L GLC++G+I GA+ LE M ++ N+ YN +++ +D K
Sbjct: 707 MMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCK 766
Query: 327 IDHAINVFESM 337
+ A + + M
Sbjct: 767 LQEAFRLHDEM 777
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 189/410 (46%), Gaps = 6/410 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ YC + + GI P V Y LI G + + + +L +M G
Sbjct: 303 LMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQG 362
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P + + ++ L + +A +F++M L P T+N +++ C+ AL
Sbjct: 363 LLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREAL 421
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++K G P + TYN L+ G CK G + A + E+ G PN +TY T+M+
Sbjct: 422 NLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGY 481
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + +L MK+ G + + + Y +I + R+ E ++ +++G +
Sbjct: 482 IAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTM 541
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN++IN + K G + +A+ + +M ++G + T+T IDG C+ G A L
Sbjct: 542 MTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLND 601
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN----VFESMEVKDSFTYSSMVHNLCKAKR 357
+ + G ++ AYN +++ ++G + HA+ + + ++ Y+S++
Sbjct: 602 VRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNM 661
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
+ SK S +K G+ S ++DG G A ++ S++ MAK
Sbjct: 662 MKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEM-MAK 710
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 181/397 (45%), Gaps = 9/397 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ I A C+ +L M+E G TY +++ + + +L + DEM +
Sbjct: 232 LAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDA 291
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G DV +LM +CL Q + A +F++ + + P + +++ G + T
Sbjct: 292 GKKMDVIVATTLMRGYCLRQ--EVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQ 349
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A + R + G +P ++++KGL R + A + +E+ DSG P+ TY ++
Sbjct: 350 KAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSG-LPDVFTYNNLI 408
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ K + L + MK+ G Y +++ + K G + EA +M +G +
Sbjct: 409 HWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFK 468
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
++V+Y TL+ Y + + AY LLDEM++ G C+ YT+ +LI+G+C +
Sbjct: 469 PNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGM 528
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
L+ GF + YN I++ K G + A V++ M K + TY+S + C+
Sbjct: 529 LKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCR 588
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
A K+L + G++ A A+++G G
Sbjct: 589 TGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEG 625
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 155/321 (48%), Gaps = 4/321 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD-LLDEMLEM 60
L+ Y FD Y +L+ M++ G+S + TYN LI G + C +D +L +
Sbjct: 477 LMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRV-CEVDGMLKSFMSE 535
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P + +YNS+++ + G A V+Q M L P T+ ++G C+ +D A
Sbjct: 536 GFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMA 595
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L+M +++ G P++V YN LI G C+ G + A +L L G APN + Y +++
Sbjct: 596 LKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITG 655
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K + +M + G D Y T+I F K G + A + +M+ G D
Sbjct: 656 YKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPD 715
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
++ L + C+ G ++ A LL+EM + + + + +LI+G + ++ A RLH
Sbjct: 716 AFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHD 775
Query: 300 EYMNKIGFDSNLEAYNCIVDR 320
E +N +G + Y+ +V +
Sbjct: 776 EMLN-MGIQPDDTTYDILVSK 795
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 174/422 (41%), Gaps = 40/422 (9%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M G+ PD+ + L+ R S +L L EM G D W +++LM + G
Sbjct: 148 MVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGM 207
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
++A R+F +M ++ P + + + LCK ALRM R +++ GF TY
Sbjct: 208 HEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRT 267
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNR--------------- 185
++ L K GR+ A + E+ D+G + I TT+M+ C R
Sbjct: 268 MVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDG 327
Query: 186 ----KYKLGL---------------EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
K G+ E+ M +G F V+ + R K+A
Sbjct: 328 IVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAV 387
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
E+M G+ D+ +YN LI+ +C+ KL A L D M+K G + T+ L+ G
Sbjct: 388 CLFEEMADSGLP-DVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGY 446
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G + A M GF N+ Y ++ D+A + + M+ +
Sbjct: 447 CKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCND 506
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 402
+TY+ +++ +C R+ +L S + G ++++G +G A + +
Sbjct: 507 YTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQ 566
Query: 403 IR 404
+R
Sbjct: 567 MR 568
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 122/314 (38%), Gaps = 38/314 (12%)
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G VP++ + L+ + + A + E+ G+ +A + +M C + ++
Sbjct: 151 RGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHED 210
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+ + M D Y I A K+G A + +M G +Y T+++
Sbjct: 211 AVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVD 270
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
+ K G++E A + DEM G + D T L+ G C + A + K G
Sbjct: 271 VLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVP 330
Query: 310 NLEAYNCIV---DRLG--------------------------------KDGKIDHAINVF 334
Y ++ D++G D + A+ +F
Sbjct: 331 TKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLF 390
Query: 335 ESME---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
E M + D FTY++++H C+A +L A L K+GV+ + +++ G G
Sbjct: 391 EEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKG 450
Query: 392 CRREAKKIQSKIRM 405
C EA K+ S++ M
Sbjct: 451 CMDEAVKLYSEMPM 464
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 151/285 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV+YN+L+ G R L L ML
Sbjct: 147 ILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 206
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN +F +M+ L P TF +++G CKN D A
Sbjct: 207 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 266
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + P+L+TYN LI GLCK G L+ A ++ E+ G P+ ITYTT++
Sbjct: 267 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDG 326
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + E M ++ D Y +I+ + GR +A + +M++ G++ D
Sbjct: 327 CCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 386
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y +IN +CK+G + LL EM++ G T+ +L++G
Sbjct: 387 ARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 160/309 (51%), Gaps = 2/309 (0%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ ++ + + + D + + G+ P V SYN+
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNT 182
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M+ + P T+++++NGLCK D+A +F + G
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 242
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP VT+ LI G CK GR+ A I K++ +P+ ITY T++ + K
Sbjct: 243 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAH 302
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
++ M KG D Y T+I K G L A ++ ++M+ + ++LD V+Y LI+
Sbjct: 303 HLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGL 362
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 310
C+EG+ A +L EM G + D T+T++I+ CK G++ KG++L L+ M + G +
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKL-LKEMQRDGHVPS 421
Query: 311 LEAYNCIVD 319
+ YN +++
Sbjct: 422 VVTYNVLMN 430
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 147/298 (49%), Gaps = 1/298 (0%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E+LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ + G P++ TY++LI GLCK ++ A + E+ G PN +T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 250
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A +++M
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSV 310
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG L++A+ M ++ D+ +T LI GLC+ G
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVD 370
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
A L M +G + Y I++ K G + + + M+ +D S + +N+
Sbjct: 371 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ-RDGHVPSVVTYNV 427
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 130/272 (47%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y + + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWG 172
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ ++Y T+M R G + SAM G D + Y +I K ++ +A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 232
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ + V++ TLI+ +CK G+++ A + +M Q D T+ LI GL
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 292
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K A ++ M+ G + Y ++D K+G +D A + M + D
Sbjct: 293 CKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDE 352
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 142/301 (47%), Gaps = 4/301 (1%)
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
F+ ++ ++ + +A+ +R ++H F + T +++ L K + +E+
Sbjct: 74 VFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWGFYEEI 133
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
+ G+ + + +M ++ +L + A+ + G Y T++ ++++G L
Sbjct: 134 LECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 193
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
E M+ GVQ D+ +Y+ LIN CKE K++ A L DEM +G + T T L
Sbjct: 194 DEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTL 253
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 340
IDG CK G + A + M +L YN ++ L K G + A ++ + M VK
Sbjct: 254 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGL 313
Query: 341 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
D TY++++ CK L SA + ++ +R+ + A A++ GL G +A+K
Sbjct: 314 KPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEK 373
Query: 399 I 399
+
Sbjct: 374 M 374
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 193/404 (47%), Gaps = 6/404 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
++ +L+ M G++P+ + +NS I + +++LL E+ +G+ PD S+NS
Sbjct: 336 WETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNS 395
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
+ + G+ EA + ++M L P ++N + K + AL + R + G
Sbjct: 396 AIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKG 455
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
P +++ NI I+ + GR + +L+++ G PN ITY + +K C + +++ L
Sbjct: 456 LTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKAL 515
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
++L+ MK T D Y + IAA K GR KEA + +M G+ D++SY I+ Y
Sbjct: 516 DLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAY 575
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
K G+ E A LL +M +G + T+ +I + G + A L+ + + +L
Sbjct: 576 GKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDL 635
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLS 367
+YN + GK G+ + A+++ M + D +Y+S + C A+ + LL+
Sbjct: 636 MSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIR-ACNAEGEWEKALGLLN 694
Query: 368 CLKS-GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
+ + GV ++ ++ G R EA + ++ +SH
Sbjct: 695 LMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGLSH 738
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 173/367 (47%), Gaps = 4/367 (1%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
I+A ++ ++L M + + PD ++YNS I R + LL EM +G+
Sbjct: 187 IEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGL 246
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
PD +YNS++ + G+ EA V +M LTP T ++N+ + ++ A+
Sbjct: 247 TPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVE 306
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ R ++ G P++++Y+ IK G+ T+ +L E+ G APN I + + + C
Sbjct: 307 VLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACG 366
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ +++ +E+L + G T D + + IAA K GR KEA + +++M ++ D +
Sbjct: 367 KGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAI 426
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
SYN+ I K G+ E A L +M +G + + I I + G + L M
Sbjct: 427 SYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQM 486
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRL 358
G N+ YN + GK G+ + A+++ M+ DS TY+S + K R
Sbjct: 487 PAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRW 546
Query: 359 PSASKLL 365
A LL
Sbjct: 547 KEAVALL 553
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 161/337 (47%), Gaps = 4/337 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++L M G++P+ ++YN I R+ ++++L +M G+ PDV SY++ +
Sbjct: 271 SVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKAC 330
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
G+ + + + +M + P T FN + K + A+ + R + G P+
Sbjct: 331 GGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDA 390
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
++N I K+GR + A +LKE+ P+AI+Y + ++ C + ++++ LE+
Sbjct: 391 TSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQ 450
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M KG T + I A + GR +E + + QM G+ ++++YN+ I K G+
Sbjct: 451 MPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQ 510
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
E A LL +M++ D T+ I K G K A L M G ++ +Y
Sbjct: 511 WEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTA 570
Query: 317 IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 349
+D GK+G+ + A+ + M K + TY+S++
Sbjct: 571 AIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVI 607
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 137/275 (49%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
+ G +L +M G++P+V+TYNS I + +LDLL +M E+ + PD +YNS
Sbjct: 476 WQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNS 535
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
+ + G+ EA + ++M LTP ++ ++ KN + A+ + R + G
Sbjct: 536 AIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKG 595
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
P ++TYN +IK + G A +LKEL ++ AP+ ++Y + C + +++ L
Sbjct: 596 LTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEAL 655
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
++L M +G T D Y + I A G ++A + M GV SY+ I
Sbjct: 656 DLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEAC 715
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
K G+ E A L+ EM ++G +++++++ L
Sbjct: 716 GKGGRREEAVCLVREMAQRGLSHRNISNSLIVEAL 750
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 153/324 (47%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
I+A + ++ + +M G++P+V++ N I L+LL +M G+
Sbjct: 432 IEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGL 491
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P+V +YNS + + G+ ++A + M +TP + T+N + K A+
Sbjct: 492 TPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVA 551
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ R + G P++++Y I K G+ A +L+++ G PN ITY +++K C
Sbjct: 552 LLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACG 611
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
R +++ L++L +K D Y I+A K GR +EA D + +M +G+ D++
Sbjct: 612 RGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVI 671
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
SY + I EG+ E A LL+ M G ++++ I+ K G + A + M
Sbjct: 672 SYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREM 731
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGK 326
+ G + + IV+ LG D K
Sbjct: 732 AQRGLSHRNISNSLIVEALGDDAK 755
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 128/291 (43%), Gaps = 6/291 (2%)
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL-QKHGFVPELVT 138
GK EA + +M G + C ++ + + + AL + R + ++ G P +
Sbjct: 124 GKWREALGILDEMKEGGVV-CAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFC 182
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
YN I+ + A +L+E+ D P+ I+Y + +K C R +++ + +L M
Sbjct: 183 YNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMP 242
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
G T D Y +VI K G+ KEA + +M G+ + +SYN I + G+ +
Sbjct: 243 SVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWK 302
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A +L +ME QG D ++ I G + + L+ M G N +N +
Sbjct: 303 EAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAI 362
Query: 319 DRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 365
GK G+ + A+ + + D+ +++S + K+ R A +LL
Sbjct: 363 VACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELL 413
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 183/374 (48%), Gaps = 3/374 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC+ S D +L+ M + G++P +Y+ LIAG RN LS +++L EM E G
Sbjct: 414 LINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERG 473
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I + +++ +L++ + K DEA R+F MI ++ P TFN+M+ G C A
Sbjct: 474 IAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAF 533
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + + G P+ TY LI GLC + A + +L +S N + T ++
Sbjct: 534 QLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGL 593
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
FR ++ + M +G D + ++ A +K +++ +M GV+ D
Sbjct: 594 FREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDD 653
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ Y +I+ KE + A D+M G+ + THT+LI+ LCK+G + A L +
Sbjct: 654 IFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKE 713
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDSFTYSSMVHNLCKAKRL 358
M N YNC +D +G ++ A ++ +M + +++ ++ LCKA ++
Sbjct: 714 MLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKI 773
Query: 359 PSASKLLLSCLKSG 372
A L+ +SG
Sbjct: 774 QEAIDLMRKITESG 787
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 183/400 (45%), Gaps = 18/400 (4%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
I AYC+ + D ++ RM G+ V YN L+ G +N + ++++ + M+ +G+
Sbjct: 205 IRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGV 264
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
D +Y +L++ ++ + + A R+ DMI P A + M++ L K + A
Sbjct: 265 TADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS 324
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ L G VP + YN LI LCK R A + KE+ G PN +TY ++
Sbjct: 325 LACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC 384
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ + L + M+ KG + Y ++I + K G L A + MV +G+
Sbjct: 385 KRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAA 444
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
SY+ LI C+ G L +A L EM ++G + YT T LI+G CK + A + M
Sbjct: 445 SYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM 504
Query: 303 -------NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHN 351
N++ F+ +E Y C+V G I A +++ M D++TY S++
Sbjct: 505 IDSNVIPNEVTFNVMIEGY-CLV------GNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
LC + A++ + S + + A++ GL G
Sbjct: 558 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREG 597
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 186/406 (45%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ FD + M G+ P+ VTY LI + ++ +L L D+M + G
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I V+ YNSL++ + G D A + M+ LTP A+++ ++ GLC+N +A+
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAM 463
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ R + + G T+ LI G CK ++ A + ++ DS PN +T+ +++
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ M G D + Y ++I+ + +A +++ + L+
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 583
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
S L+ +EG+ Y L DEM +G + D + TI++ K + + + +
Sbjct: 584 FSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 643
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M + G + Y C++D L K+ + A+N ++ M + ++ T++ +++NLCK+
Sbjct: 644 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGY 703
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L SA L L V K +D G +AK + S +
Sbjct: 704 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 167/340 (49%), Gaps = 2/340 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ +C+ + I + M G P + +I + L+ + L ++ ++G
Sbjct: 274 LVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLG 333
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V++YN+L+ L + + D+A+R+F++M L P T+ I+++ LCK ++AL
Sbjct: 334 MVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDAL 393
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ G + YN LI G CK G L AR +L + G P A +Y+ ++
Sbjct: 394 CLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGL 453
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
RN +E+ M +G ++ + + +I F K ++ EA ++M+ V +
Sbjct: 454 CRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 513
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC-KAGNIKGARLHLE 300
V++N +I YC G + A+ L D+M + G + D YT+ LI GLC +G K +
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVAD 573
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
N +N + ++ L ++G+ ++++ M V+
Sbjct: 574 LENSYAVLNNF-SLTALLYGLFREGRFTETYHLWDEMAVR 612
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 173/403 (42%), Gaps = 41/403 (10%)
Query: 25 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 84
+GI+ + T + ++ + + + DL D+ML+ G+ D + Y + + + D
Sbjct: 157 SGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDG 216
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
A + M + +N+++ GLCKN A+ + + G + VTY L+
Sbjct: 217 ARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVY 276
Query: 145 GLCKAGRLRTARWILKE-----------------------------------LGDSGHAP 169
G C+ L A I + LGD G P
Sbjct: 277 GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVP 336
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
N Y ++ +N ++ + M +G + Y +I A K G +++A
Sbjct: 337 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 396
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
++M G+++ + YN+LIN YCK+G L+ A LL M K+G +++ LI GLC+
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 456
Query: 290 GNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFT 344
G++ A LH E M + G N + +++ KD K+D A +F+ M + + T
Sbjct: 457 GDLSSAMELHRE-MAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 515
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
++ M+ C + A +L ++ G++ ++++ GL
Sbjct: 516 FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 186/433 (42%), Gaps = 48/433 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C+ D + ++M ++ + P+ VT+N +I G + + L D+M+EMG
Sbjct: 484 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG 543
Query: 62 IPPDVWSYNSL-----------------------------------MHCLFQLGKPDEAN 86
+ PD ++Y SL ++ LF+ G+ E
Sbjct: 544 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETY 603
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
++ +M + +F I++ K + + +FR +++ G P+ + Y +I L
Sbjct: 604 HLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 663
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF-D 205
K + A ++ G++PN +T+T ++ ++ Y E+L G +
Sbjct: 664 SKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKS-GYLGSAELLCKEMLAGNVLPN 722
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
F Y + F G +++A D M+ G IVS+N LI CK GK++ A L+
Sbjct: 723 KFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMR 781
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
++ + GF D +++ +I LCK G+I A M G ++ AYN + G
Sbjct: 782 KITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHG 841
Query: 326 KIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLL----SCLKSGVRILKSAQK 381
+ D A+ ++ +M S + N + L S L+L SC + + ++ +
Sbjct: 842 ESDKALGIYTNM------IRSGVQPNWDTYRALLSGISLMLHYDFSCFRGTKQYIQISVY 895
Query: 382 AVVDGLRHSGCRR 394
++D + RR
Sbjct: 896 ELMDSTHNKSHRR 908
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 133/305 (43%), Gaps = 4/305 (1%)
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
T + +L L K R A +F + + G + Y I+ C++ L AR ++ +
Sbjct: 165 TASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRM 224
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
G +A+ Y +M +N + + +E+ + M G T D Y T++ F ++ L
Sbjct: 225 ESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEEL 284
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
+ A M+ G + + +I+ K+ +E A+ L ++ G + + + L
Sbjct: 285 EMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNAL 344
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 340
ID LCK A + M G + N Y ++ L K G I+ A+ +F+ M K
Sbjct: 345 IDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGI 404
Query: 341 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
+ Y+S+++ CK L A LL +K G+ ++ ++ GL +G A +
Sbjct: 405 KVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAME 464
Query: 399 IQSKI 403
+ ++
Sbjct: 465 LHREM 469
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 113/276 (40%), Gaps = 39/276 (14%)
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
SG N T + I+ + R++ L ++ M + G D + Y I A+ + L
Sbjct: 157 SGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDG 216
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A + +M ++GV+ V YN L+ CK +++ A + + M G D+ T+ L+
Sbjct: 217 ARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVY 276
Query: 285 GLCKAGNIKGARLHLEYMNKIGF-----------------------------------DS 309
G C+ ++ A M ++GF
Sbjct: 277 GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVP 336
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
N+ AYN ++D+L K+ + D A +F+ M + + TY+ ++H LCK + A L
Sbjct: 337 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 396
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
G+++ ++++G G A+ + S
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLS 432
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 68/130 (52%), Gaps = 2/130 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ ++ ++ E+G SPD ++Y+++I + ++ + +L +EML
Sbjct: 762 ILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK 821
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV +YN + G+ D+A ++ +MI + P T+ +L+G+ + D
Sbjct: 822 GLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYD-- 879
Query: 121 LRMFRGLQKH 130
FRG +++
Sbjct: 880 FSCFRGTKQY 889
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 192/391 (49%), Gaps = 16/391 (4%)
Query: 34 YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
+NSL+ R L S+ + M G+ P V ++NSL+ L + G+ + A +V+ +M+
Sbjct: 152 FNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEML 211
Query: 94 CG-DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
+TP T TFNI++ G C N D+ R+F L + G P++VTYN L+ GLC+AG++
Sbjct: 212 STYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKV 271
Query: 153 RTARWILKELGDSG--HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
A ++K +G PN +TYTT+++ R+ + L + M +G + Y
Sbjct: 272 TVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYN 331
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGV-QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
T+I + + ++ D +E DG D ++NTL++ +C G L+ A + + M +
Sbjct: 332 TLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSE 391
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYM--NKI-----GFDSNLEAYNCIVDRLG 322
+ D T++ L+ LC+ G+ + A L+ + KI G + AYN I L
Sbjct: 392 LKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLC 451
Query: 323 KDGKIDHAINVFESM---EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
+ GK A F + +D +Y +++ CK S +LL+ L+
Sbjct: 452 ETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFET 511
Query: 380 QKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
+++++GL H + +QS +M + SH
Sbjct: 512 YESLINGLLHMD--KPLLALQSLEKMLRSSH 540
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 164/363 (45%), Gaps = 15/363 (4%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G++PD T+N LI G N ++ + +++ G PDV +YN+L+ L + GK A
Sbjct: 215 GVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVA 274
Query: 86 NRVFQDM--ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
V + M DL P T+ ++ G C R + AL +F + G +TYN LI
Sbjct: 275 YNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLI 334
Query: 144 KGLCKAGRLRTARWILK-ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
KGLC+A + + IL+ GD +P+ T+ T+M C L++ M
Sbjct: 335 KGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKI 394
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT-------DGVQLDIVSYNTLINLYCKEG 255
D Y ++ + + G ++A D +++++ DG + + +YN + C+ G
Sbjct: 395 QPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETG 454
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
K + A ++ ++G + D ++ LI G CK G + L M + F + E Y
Sbjct: 455 KTKKAEKAFRQLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYE 513
Query: 316 CIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
+++ L K A+ E M +S T+ S++ L + R ++ L+ L
Sbjct: 514 SLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRASESASLIQLMLDK 573
Query: 372 GVR 374
+R
Sbjct: 574 NIR 576
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 173/360 (48%), Gaps = 14/360 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C D G+ I N + G PDVVTYN+L+ G R ++ + +++ M +
Sbjct: 225 ILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKK 284
Query: 61 GIP--PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
+ P+V +Y +L+ + ++A VF++M+ L T+N ++ GLC+ R +
Sbjct: 285 SVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFE 344
Query: 119 NALRMFRGLQKHG-FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
+ G G F P+ T+N L+ C AG L A + + + + P++ TY+ +
Sbjct: 345 KIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSAL 404
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI-------GRLKEATDYME 230
++ + Y+ ++L + + G G ++AA+ I G+ K+A
Sbjct: 405 VRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFR 464
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
Q++ G Q D SY TLI +CKEG E+ Y LL M ++ F D T+ LI+GL
Sbjct: 465 QLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLHMD 523
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDSFTYSS 347
A LE M + N ++ I+ +L + G+ + ++ + M ++ + ++S+
Sbjct: 524 KPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRASESASLIQLMLDKNIRQNLSFST 583
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 166/411 (40%), Gaps = 45/411 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
LI C+ F+ IL G SPD T+N+L+ L +L + + M E+
Sbjct: 333 LIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSEL 392
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI------CGD-LTPCTATFNIMLNGLCK 113
I PD +Y++L+ L Q G ++A + ++ GD P A +N + LC+
Sbjct: 393 KIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCE 452
Query: 114 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
T A + FR L + G + +Y LI G CK G + +L + P+ T
Sbjct: 453 TGKTKKAEKAFRQLMRRG-TQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFET 511
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
Y +++ K L L+ L M R + + + +++A ++ GR E+ ++ M+
Sbjct: 512 YESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRASESASLIQLML 571
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-I 292
++ ++ + L G + A+ L+ + +G+ LI LC I
Sbjct: 572 DKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKGYSVKMEE---LIRYLCHCRKVI 628
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
+G++L L + ES + D ++++ L
Sbjct: 629 QGSKLLLFSL--------------------------------ESHQFVDMDLCNTVIFQL 656
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
C+ +L A L ++ GV S Q + L+ G EA+ +Q ++
Sbjct: 657 CEINKLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLKAGGKLEEAESVQKRM 707
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 193/386 (50%), Gaps = 22/386 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ C G+ + G SP++VTYN+LI G +S + L M ++
Sbjct: 109 ILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKL 168
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT-------PCTATFNIMLNGLCK 113
G PDV +Y +L+ L G + A ++ Q+M+ D++ P T+NI+++GLCK
Sbjct: 169 GCTPDVVTYGTLIKGLCGTGNINIALKLHQEML-NDISRYEINCKPNVITYNIIVDGLCK 227
Query: 114 NRYTDNALRMFRGLQKHGFV----------PELVTYNILIKGLCKAGRLRTARWILKELG 163
D A ++F ++ G + P++VT+N+LI LCK G++ A+ +L +
Sbjct: 228 VGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMI 287
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+SG P+ +TY ++++ E+ +M KG D Y +I + K +++
Sbjct: 288 ESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVE 347
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
EA +M+ G + ++++Y++L+ GK++ A L M+ G + YT+ I +
Sbjct: 348 EAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFL 407
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
DGLCK + A + F +E NC++D L K GK++ A +FE + +
Sbjct: 408 DGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHE 467
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLL 365
+ TY+ M+H C+ ++ A+ L+
Sbjct: 468 PNVVTYTIMIHGFCREGQVDKANVLI 493
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 176/391 (45%), Gaps = 51/391 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML--- 58
LI C + RM++ G +PDVVTY +LI G ++ +L L EML
Sbjct: 145 LIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDI 204
Query: 59 ---EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM----------ICGDLTPCTATFN 105
E+ P+V +YN ++ L ++G+ DEA ++F++M + L P TFN
Sbjct: 205 SRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFN 264
Query: 106 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY-------------------------- 139
++++ LCK A ++ + + G VP+LVTY
Sbjct: 265 VLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSK 324
Query: 140 ---------NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
N+LI G K ++ A + E+ G PN ITY +++K F K
Sbjct: 325 GCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDA 384
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
++ S MK G + + Y + K L EA ++ + +L+I + N LI+
Sbjct: 385 KKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDG 444
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
CK GKLE A+ L +++ +G E + T+TI+I G C+ G + A + ++ M G +
Sbjct: 445 LCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPD 504
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVKD 341
+ YN ++ + K++ + + M KD
Sbjct: 505 IITYNTLMRGFYESNKLEEVVQLLHRMAQKD 535
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 143/287 (49%), Gaps = 35/287 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C ++ + M G PDV++YN LI G ++ + ++ L +EML +G
Sbjct: 301 LIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVG 360
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +Y+SL+ +F GK D+A ++F M + + T+ I L+GLCKN A+
Sbjct: 361 KRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAM 420
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F L+ F E+ N LI GLCKAG+L TA + ++L + GH PN +TYT +
Sbjct: 421 KLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIM---- 476
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
I F + G++ +A +++M +G DI
Sbjct: 477 -------------------------------IHGFCREGQVDKANVLIQKMEANGCTPDI 505
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
++YNTL+ + + KLE LL M ++ D T +I++D L K
Sbjct: 506 ITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSK 552
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 185/404 (45%), Gaps = 24/404 (5%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M + +P + ++N L++G + S L ++M G+ D + N L++CL + +
Sbjct: 60 MMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNR 119
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
E F ++ +P T+N ++ GLC A R+F +QK G P++VTY
Sbjct: 120 LREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGT 179
Query: 142 LIKGLCKAGRLRTARWILKE-LGDSGH-----APNAITYTTIM------------KCCFR 183
LIKGLC G + A + +E L D PN ITY I+ K F
Sbjct: 180 LIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFE 239
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
K + G+ I + M +G D + +I K G++ EA + M+ G+ D+V+
Sbjct: 240 EMKTQ-GM-IPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVT 297
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
YN+LI +C G L +A L M +G E D ++ +LI+G K ++ A M
Sbjct: 298 YNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEML 357
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLP 359
+G N+ Y+ ++ + GK+D A +F M+ ++S+TY + LCK L
Sbjct: 358 LVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLF 417
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A KL S ++ ++DGL +G A ++ K+
Sbjct: 418 EAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKL 461
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 175/383 (45%), Gaps = 20/383 (5%)
Query: 42 TRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 101
T N + +L M+ P + S+N L+ L ++ + ++ M L+
Sbjct: 45 TGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDR 104
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
T NI+LN LC F G+ + G+ P +VTYN LIKGLC R+ A +
Sbjct: 105 CTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLR 164
Query: 162 LGDSGHAPNAITYTTIMK-CCFR---NRKYKLGLEILSAMKRKGYT--FDGFGYCTVIAA 215
+ G P+ +TY T++K C N KL E+L+ + R + Y ++
Sbjct: 165 MQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDG 224
Query: 216 FVKIGRLKEATDYMEQMVT----------DGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
K+GR EA E+M T G+Q D+V++N LI+ CKEGK+ A LL
Sbjct: 225 LCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLG 284
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M + G D T+ LI+G C G++ AR M G + ++ +YN +++ K
Sbjct: 285 VMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTL 344
Query: 326 KIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
K++ A+ ++ M + + TY S++ + A ++ A KL G+
Sbjct: 345 KVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYG 404
Query: 382 AVVDGLRHSGCRREAKKIQSKIR 404
+DGL + C EA K+ ++++
Sbjct: 405 IFLDGLCKNDCLFEAMKLFTELK 427
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 161/323 (49%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
I N M + G+ PD+VT+N LI + + + LL M+E GI PD+ +YNSL+
Sbjct: 247 IPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFC 306
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+G + A +F M P ++N+++NG K + A++++ + G P ++
Sbjct: 307 MVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVI 366
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY+ L+KG+ AG++ A+ + + G A N+ TY + +N +++ + +
Sbjct: 367 TYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTEL 426
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K + + +I K G+L+ A + E++ +G + ++V+Y +I+ +C+EG++
Sbjct: 427 KSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQV 486
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A +L+ +ME G D T+ L+ G ++ ++ L M + + + +
Sbjct: 487 DKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIV 546
Query: 318 VDRLGKDGKIDHAINVFESMEVK 340
VD L KD K +++ ++
Sbjct: 547 VDMLSKDEKYQECLHLLPRFPIQ 569
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 151/285 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV+YN+L+ G R L L ML
Sbjct: 147 ILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 206
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN +F +M+ L P TF +++G CKN D A
Sbjct: 207 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 266
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + P+L+TYN LI GLCK G L+ A ++ E+ G P+ ITYTT++
Sbjct: 267 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDG 326
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + E M ++ D Y +I+ + GR +A + +M++ G++ D
Sbjct: 327 CCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 386
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y +IN +CK+G + LL EM++ G T+ +L++G
Sbjct: 387 ARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 159/309 (51%), Gaps = 2/309 (0%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ ++ + + + D + + G+ P V SYN+
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNT 182
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M+ + P T+++++NGLCK D+A +F + G
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 242
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP VT+ LI G CK GR+ A I K++ +P+ ITY T++ + K
Sbjct: 243 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAH 302
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
++ M KG D Y T+I K G L A ++ ++M+ + ++LD V+Y LI+
Sbjct: 303 HLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGL 362
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 310
C+EG+ A +L EM G + D T+T++I+ CK G++ KG +L L+ M + G +
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKL-LKEMQRDGHVPS 421
Query: 311 LEAYNCIVD 319
+ YN +++
Sbjct: 422 VVTYNVLMN 430
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 147/298 (49%), Gaps = 1/298 (0%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E+LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ + G P++ TY++LI GLCK ++ A + E+ G PN +T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 250
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A +++M
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSV 310
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG L++A+ M ++ D+ +T LI GLC+ G
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVD 370
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
A L M +G + Y I++ K G + + + M+ +D S + +N+
Sbjct: 371 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQ-RDGHVPSVVTYNV 427
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 130/272 (47%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y + + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWG 172
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ ++Y T+M R G + SAM G D + Y +I K ++ +A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 232
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ + V++ TLI+ +CK G+++ A + +M Q D T+ LI GL
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 292
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K A ++ M+ G + Y ++D K+G +D A + M + D
Sbjct: 293 CKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDE 352
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 141/301 (46%), Gaps = 4/301 (1%)
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
F+ ++ ++ + +A+ +R ++H F T +++ L K + +E+
Sbjct: 74 VFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEI 133
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
+ G+ + + +M ++ +J + A+ + G Y T++ ++++G L
Sbjct: 134 LECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 193
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
E M+ GVQ D+ +Y+ LIN CKE K++ A L DEM +G + T T L
Sbjct: 194 DEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTL 253
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 340
IDG CK G + A + M +L YN ++ L K G + A ++ + M VK
Sbjct: 254 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGL 313
Query: 341 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
D TY++++ CK L SA + ++ +R+ + A A++ GL G +A+K
Sbjct: 314 KPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEK 373
Query: 399 I 399
+
Sbjct: 374 M 374
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 197/437 (45%), Gaps = 77/437 (17%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ + C D ++ + +R G++PD VTY++L++G ++ L +LDLLDEM
Sbjct: 163 IILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNY 222
Query: 61 GIPPDVWSYNSLMHCLF------------------------------------QLGKPDE 84
G+ D YN+L+ F +LG+ E
Sbjct: 223 GVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKE 282
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
A V+ M+ + T T+ I+++GLC++ D+A R++ + K G V ++ YN LIK
Sbjct: 283 AGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIK 342
Query: 145 GLCKAGR----------------------------------LRTARWILKEL-GDSGHAP 169
G C+ GR + A +LK+L D+ +P
Sbjct: 343 GFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSP 402
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
+ +T+ T++ N EIL + G D F Y ++I F K GR +A +
Sbjct: 403 DKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVY 462
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
+ MV DG + + YN LIN +C+ K+ A + EM G T+ LIDGLCKA
Sbjct: 463 KNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKA 522
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES-----MEVKDSFT 344
+ A + M + GF ++ Y ++ L +D K+D A+ +++ ++V D
Sbjct: 523 EKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQV-DVMV 581
Query: 345 YSSMVHNLCKAKRLPSA 361
++ ++H LC A ++ A
Sbjct: 582 HNILIHGLCSAGKVDEA 598
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 181/413 (43%), Gaps = 41/413 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D C+ F + +RM D VTY LI G R+ + + + +M++
Sbjct: 269 VMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKA 328
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQD--------------MICGDL--------- 97
G+ DV YNSL+ ++G+ EA + + M G L
Sbjct: 329 GLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEAT 388
Query: 98 ------------TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+P TF +++GLC+N Y + A + + G ++ +Y+ +I
Sbjct: 389 ELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINR 448
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
CK GR A + K + G PN+ Y ++ R K ++I M G
Sbjct: 449 FCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPT 508
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y T+I K + +EA+ ++M+ G + DI +Y +LI C++ K++ A + D
Sbjct: 509 IITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWD 568
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
E+ G + D H ILI GLC AG + A ++LE M + NL YN ++D +
Sbjct: 569 EILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLE-MKEKNCSPNLVTYNTLMDGFYEI 627
Query: 325 GKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
G ID A +++ ++ D TY++ + LC R P LL L +G+
Sbjct: 628 GSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGI 680
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 153/325 (47%), Gaps = 15/325 (4%)
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD----LTPCTATFNIMLNGLCKNR 115
+G P V S+N+L+ + + +A+ F + G + P T+NI+L LC
Sbjct: 113 LGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARG 172
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D A+ +F L++ G P+ VTY+ L+ GL K +L A +L E+ + G +A+ Y
Sbjct: 173 DVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYN 232
Query: 176 TIMKCCFRNRKYKLGLEILSAMKR-KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
++ CFR ++ +++ + R G + + Y ++ K+GR KEA + +M+
Sbjct: 233 ALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMA 292
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
+ Q D V+Y LI+ C+ G +++A + +M K G D + LI G C+ G
Sbjct: 293 NNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGE 352
Query: 295 ARLHLEYMNKIGFDS--NLEAYNCIVDRLGKDGKIDHAINVFESME-----VKDSFTYSS 347
A ++ + GF + YN + L G + A + + +E D T+ +
Sbjct: 353 A---WKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGT 409
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSG 372
++H LC+ A ++L SG
Sbjct: 410 LIHGLCENGYANRAFEILEDARNSG 434
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 153/304 (50%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
+A SPD VT+ +LI G N + + ++L++ G DV+SY+S+++ + G+
Sbjct: 397 DASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTH 456
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+AN V+++M+ P + +N ++NG C+ ++A++++ + +G P ++TYN LI
Sbjct: 457 DANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLI 516
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
GLCKA + + A + KE+ + G P+ TY ++++ R++K + L I + G
Sbjct: 517 DGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQ 576
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D + +I G++ EA +M ++V+YNTL++ + + G ++ A L
Sbjct: 577 VDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASL 636
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
+ G + D T+ I GLC L L + G + ++ +V + K
Sbjct: 637 WTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIK 696
Query: 324 DGKI 327
G I
Sbjct: 697 YGPI 700
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 137/292 (46%), Gaps = 35/292 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ +C+ + M + G P+ YN+LI G R S ++ ++ + EM G
Sbjct: 445 MINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNG 504
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + +YN+L+ L + K EA+ + ++M+ P T+ ++ GLC+++ D AL
Sbjct: 505 CCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVAL 564
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R++ + G +++ +NILI GLC AG++ A I E+ + +PN +TY T+M
Sbjct: 565 RIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLM--- 621
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
DG F +IG + +A ++ +G++ DI
Sbjct: 622 -----------------------DG---------FYEIGSIDKAASLWTAILDNGLKPDI 649
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
V+YNT I C + LLL+E+ G T +IL+ + K G I+
Sbjct: 650 VTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQ 701
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 55/113 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C D + I M+E SP++VTYN+L+ G + + L +L+
Sbjct: 584 ILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDN 643
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 113
G+ PD+ +YN+ + L + E + +++ + P T++I++ + K
Sbjct: 644 GLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIK 696
>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
Length = 394
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 181/353 (51%), Gaps = 7/353 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L M+ AGI+P +VT+ SLI + + +L + +M++M + PD + Y ++ L
Sbjct: 1 LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
++ K D A F+ M+ P T+ ++++ L K + ++F + G PELV
Sbjct: 61 KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY ++ G CKAGR+ A +++ L +G +P+ Y+T++ ++ +++ E+
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEMA 180
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
G D Y + I+ K G+L EA +M+ G D VSYN +I CK+ ++
Sbjct: 181 --AGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 238
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS-NLEAYNC 316
A L+D+ ++ T+L+DGLCK+ ++ A + LE M + G + ++ Y+
Sbjct: 239 SEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSA 298
Query: 317 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
++D L K ++D A V + M V D TY++++ CK RL A +L
Sbjct: 299 VIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELF 351
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 180/372 (48%), Gaps = 38/372 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + I ++M + + PD Y +I + + L + ++M++ G
Sbjct: 20 LIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFEQMVQSG 79
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +Y L+H LF+ K ++ +++F++M+ +P T+ ++NG CK D AL
Sbjct: 80 CLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQAL 139
Query: 122 RMFRGLQKHGFVPELVTYNILI---------------------------------KGLCK 148
+ R L+ G P Y+ LI GLCK
Sbjct: 140 SLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEMAAGDVQDVIVYTSFISGLCK 199
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL-SAMKRKGYTFDGF 207
AG+L A+ + ++ ++G AP+ ++Y I+ ++ + E++ AM+RK G
Sbjct: 200 AGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERK--CMPGV 257
Query: 208 GYCTVIA-AFVKIGRLKEATDYMEQMVTDGVQL-DIVSYNTLINLYCKEGKLEAAYLLLD 265
CTV+ K R++EA +E+M+ G + +V+Y+ +I+ CK +L+ AY++L
Sbjct: 258 PVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQ 317
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+M + G D T+T +ID CK G + AR + M++ G S++ AYN ++ +
Sbjct: 318 KMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRAA 377
Query: 326 KIDHAINVFESM 337
K+D AI + E M
Sbjct: 378 KVDEAIAMIEEM 389
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 141/306 (46%), Gaps = 34/306 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL------ 54
+L+ + + ++ G+ I M G SP++VTY +++ G + + +L L+
Sbjct: 89 VLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGT 148
Query: 55 -------------------------DEMLEM--GIPPDVWSYNSLMHCLFQLGKPDEANR 87
E+ EM G DV Y S + L + GK DEA
Sbjct: 149 GRSPSGSLYSTLIDGLCKHDRHEEARELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKA 208
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
V MI P ++N+++ LCK+ A + + +P + +L+ GLC
Sbjct: 209 VHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLC 268
Query: 148 KAGRLRTARWILKELGDSG-HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
K+ R+ A IL+ + ++G AP+ +TY+ ++ + + +L M+R G D
Sbjct: 269 KSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDV 328
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I AF K+GRL EA + ++M G D+V+YN LI YC+ K++ A +++E
Sbjct: 329 VTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEE 388
Query: 267 MEKQGF 272
M +G
Sbjct: 389 MAGRGI 394
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 4/173 (2%)
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+M G+ IV++ +LI C+ A + +M + D + +T++I LCK
Sbjct: 4 EMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKIN 63
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 346
+ A + E M + G + Y +V L K K + +FE M K + TY+
Sbjct: 64 KLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYA 123
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
++V+ CKA R+ A L+ +G S ++DGL EA+++
Sbjct: 124 TVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEAREL 176
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 194/417 (46%), Gaps = 27/417 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG--ATRNSLLSCSLDLLD---- 55
L+ AYC Y +L +M + G +P V YN LI ++SL L+L +
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYS 437
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
EML G+ + + +S CL GK ++A V ++MI P T+T++ +L LC
Sbjct: 438 EMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNAS 497
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
+ A +F +++ G V ++ TY I++ CKAG + AR E+ + G PN +TYT
Sbjct: 498 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 557
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM--- 232
++ + +K E+ M +G + Y +I K G++++A E+M
Sbjct: 558 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGS 617
Query: 233 --VTD------------GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
V D + ++V Y L++ +CK ++E A LLD M +G E ++
Sbjct: 618 KDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIV 677
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+ LIDGLCK G + A+ M++ GF + L Y+ ++DR K + D A V M
Sbjct: 678 YDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 737
Query: 339 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ Y+ M+ LCK + A KL+ + G + A++DG G
Sbjct: 738 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIG 794
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 192/389 (49%), Gaps = 29/389 (7%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D++C+ + N MRE G +P+VVTY +LI + +S + +L + ML
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICG--DLT----------------PC 100
G P++ +Y++L+ HC + G+ ++A ++F+ M CG D+ P
Sbjct: 583 GCLPNIVTYSALIDGHC--KAGQMEKACQIFERM-CGSKDVPDVDMYFKQYDDDNSERPN 639
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
+ +L+G CK + A ++ + G P + Y+ LI GLCK G+L A+ +
Sbjct: 640 VVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKA 699
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
E+ + G TY++++ F+ ++ L ++LS M + Y +I K+G
Sbjct: 700 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 759
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
+ EA M+ M G Q ++V+Y +I+ + + GK+E LL+ M +G + T+
Sbjct: 760 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYR 819
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
+LID CK G + A LE M + + ++ Y +++ K+ ++ + + +
Sbjct: 820 VLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKE--FIESLGLLDEIGQD 877
Query: 341 DSFTYSS----MVHNLCKAKRLPSASKLL 365
D+ + S +V NL KA+RL A +LL
Sbjct: 878 DTAPFLSLYRLLVDNLIKAQRLEMALRLL 906
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 161/349 (46%), Gaps = 17/349 (4%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
C + + + M+ G+ DV TY ++ + L+ + +EM E+G P+V
Sbjct: 494 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV 553
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
+Y +L+H + K AN +F+ M+ P T++ +++G CK + A ++F
Sbjct: 554 VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFER 613
Query: 127 LQKHGFVPEL-----------------VTYNILIKGLCKAGRLRTARWILKELGDSGHAP 169
+ VP++ V Y L+ G CK R+ AR +L + G P
Sbjct: 614 MCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEP 673
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
N I Y ++ + K E+ + M G+ + Y ++I + K+ R A+ +
Sbjct: 674 NQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL 733
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
+M+ + ++V Y +I+ CK GK + AY L+ ME++G + + T+T +IDG +
Sbjct: 734 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRI 793
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
G I+ LE M G N Y ++D K+G +D A N+ E M+
Sbjct: 794 GKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 842
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 161/332 (48%), Gaps = 4/332 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D +C+ + +L+ M G P+ + Y++LI G + L + ++ EM E G
Sbjct: 646 LLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHG 705
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P +++Y+SL+ F++ + D A++V M+ P + M++GLCK TD A
Sbjct: 706 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 765
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + +++ G P +VTY +I G + G++ T +L+ +G G APN +TY ++ C
Sbjct: 766 KLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 825
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N + +L MK+ + GY VI F K E+ ++++ D +
Sbjct: 826 CKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFL 883
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY--THTILIDGLCKAGNIKGARLHL 299
Y L++ K +LE A LL+E+ Y T+ LI+ LC A + A
Sbjct: 884 SLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLF 943
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
M+K G ++ + ++ L ++ KI A+
Sbjct: 944 SEMSKKGVIPEMQTFCSLIKGLFRNSKISEAL 975
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 196/461 (42%), Gaps = 64/461 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ F+ LNRMR P+VVTY++L+ G L +L+ M+ G
Sbjct: 308 LISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEG 367
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYT--- 117
P +NSL+H G A ++ + M+ CG TP +NI++ +C ++ +
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH-TPGYVVYNILIGSICGDKDSLSC 426
Query: 118 ---DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
+ A + + + G V + + + LC AG+ A +++E+ G P+ TY
Sbjct: 427 HLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
+ ++ K +L + MKR G D + Y ++ +F K G +++A + +M
Sbjct: 487 SKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G ++V+Y LI+ Y K K+ A L + M +G + T++ LIDG CKAG ++
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEK 606
Query: 295 A--------------------------------------------RLH--------LEYM 302
A +LH L+ M
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAM 666
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRL 358
+ G + N Y+ ++D L K GK+D A V M +TYSS++ K KR
Sbjct: 667 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQ 726
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
ASK+L L++ ++DGL G EA K+
Sbjct: 727 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 767
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 177/415 (42%), Gaps = 33/415 (7%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM-HCLF 77
L M PD V Y LI+G SL ++D L+ M P+V +Y++L+ CL
Sbjct: 290 LTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349
Query: 78 --QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
QLG+ RV M+ P FN +++ C + A ++ + + K G P
Sbjct: 350 KKQLGR---CKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPG 406
Query: 136 LVTYNILIKGLC------KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
V YNILI +C L A E+ +G N I ++ +C KY+
Sbjct: 407 YVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEK 466
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
++ M +G+ D Y V+ +++ A E+M G+ D+ +Y +++
Sbjct: 467 AFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVD 526
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
+CK G +E A +EM + G + T+T LI KA + A E M G
Sbjct: 527 SFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 586
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESM---------------------EVKDSFTYSSM 348
N+ Y+ ++D K G+++ A +FE M E + Y ++
Sbjct: 587 NIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGAL 646
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ CK R+ A KLL + G + A++DGL G EA+++++++
Sbjct: 647 LDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEM 701
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 171/410 (41%), Gaps = 48/410 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ YC+ SF L R+++ P TYN LI + L + + EM
Sbjct: 205 VLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLA 264
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ D ++ + L ++GK EA + M + P T + +++GLC+ + A
Sbjct: 265 NLRMDGFTLRCYAYSLCKVGKWREALTL---METENFVPDTVFYTKLISGLCEASLFEEA 321
Query: 121 LRMFRGLQKHGFVPELVTY-----------------------------------NILIKG 145
+ ++ +P +VTY N L+
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIM------KCCFRNRKYKLGLEILSAMKR 199
C +G A +LK++ GH P + Y ++ K +L + S M
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLA 441
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
G + + G+ ++A + +M+ G D +Y+ ++ C K+E
Sbjct: 442 TGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMEL 501
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A+LL +EM++ G D YT+TI++D CKAG I+ AR M ++G N+ Y ++
Sbjct: 502 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIH 561
Query: 320 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
K K+ +A +FE+M + + TYS+++ CKA ++ A ++
Sbjct: 562 AYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIF 611
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 78/161 (48%), Gaps = 4/161 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ + D + +L M++ Y +I G + + S L LLDE+ +
Sbjct: 820 VLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEFIES--LGLLDEIGQD 877
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM--ICGDLTPCTATFNIMLNGLCKNRYTD 118
P + Y L+ L + + + A R+ +++ L ++T+N ++ LC D
Sbjct: 878 DTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVD 937
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL 159
A R+F + K G +PE+ T+ LIKGL + ++ A +L
Sbjct: 938 KAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLL 978
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 148/386 (38%), Gaps = 58/386 (15%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
YN+L+ + + + Q + D N+++ C++ AL L+
Sbjct: 168 YNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFSIALEELGRLK 227
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
F P TYN LI+ KA L +A + +E+ + + T C+ K
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLR-----CYAYSLCK 282
Query: 189 LG--LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY-- 244
+G E L+ M+ + + D Y +I+ + +EA D++ +M ++V+Y
Sbjct: 283 VGKWREALTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYST 342
Query: 245 ---------------------------------NTLINLYCKEGKLEAAYLLLDEMEKQG 271
N+L++ YC G AY LL +M K G
Sbjct: 343 LLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG 402
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG--------- 322
+ ILI +C G+ HL + + + S + A +++++
Sbjct: 403 HTPGYVVYNILIGSIC--GDKDSLSCHLLELAEKAY-SEMLATGVVLNKINVSSFTRCLC 459
Query: 323 KDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
GK + A +V M + D+ TYS ++ LC A ++ A L + G+
Sbjct: 460 SAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVY 519
Query: 379 AQKAVVDGLRHSGCRREAKKIQSKIR 404
+VD +G +A+K +++R
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMR 545
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI++ C D + + + M + G+ P++ T+ SLI G RNS +S +L LLD + M
Sbjct: 926 LIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLDFISHMV 985
Query: 62 IP 63
P
Sbjct: 986 CP 987
>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 194/395 (49%), Gaps = 11/395 (2%)
Query: 18 ILNRMREAGISPDVVTYNSL--IAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
++ +M++ PD +YN++ + R+ S+D L+E+LE G+ P +YN+++H
Sbjct: 214 LIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHG 273
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
+ G+ ++A + M+ P T NI+L GLC DNAL++F G +
Sbjct: 274 YCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAID 333
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL--GLEI 193
VTYN +I GLCK GR A +L E+ + P+ TY I+ C + + ++ +
Sbjct: 334 AVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAIL-CALADAEGQVEKAFQF 392
Query: 194 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 253
+ M K + D F ++ G L A ++ G +D V+YNT+I+ CK
Sbjct: 393 RNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCK 452
Query: 254 EGKLEAAYLLLDEM-EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
EG+ E A+ LL EM EK G D+ T+ +I G C+ G ++ A M + F +L
Sbjct: 453 EGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLF 512
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 368
N ++ L ++G + A+ +F + K D+ TY++++ LCK R A LL
Sbjct: 513 TCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEM 572
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ + A++ L +G R EA++ SKI
Sbjct: 573 KEKKLGPDCYTYNAILCALADAG-RMEAEEFMSKI 606
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 153/307 (49%), Gaps = 6/307 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C D + N G + D VTYN++I+G + + DLL EM E
Sbjct: 304 ILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEK 363
Query: 61 GIPPDVWSYNSLMHCLFQL-GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ PD ++YN+++ L G+ ++A + M+ P T NI+L GLC DN
Sbjct: 364 KLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDN 423
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD-SGHAPNAITYTTIM 178
AL++F G + VTYN +I GLCK GR A +L E+ + +G P+ TY TI+
Sbjct: 424 ALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTII 483
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
R + + + + M K + D F ++ + G L +A ++ G
Sbjct: 484 LGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKA 543
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+D V+YNT+I+ CKEG+ E A+ LL EM+++ D YT+ ++ L AG ++
Sbjct: 544 IDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRMEAE--- 600
Query: 299 LEYMNKI 305
E+M+KI
Sbjct: 601 -EFMSKI 606
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 180/361 (49%), Gaps = 8/361 (2%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
C+ D LN + E+G+ P +TYN++I G R + + ++M+E PD+
Sbjct: 240 CRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDL 299
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
++ N L+ L G D A ++F I T+N +++GLCK + A +
Sbjct: 300 FTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAE 359
Query: 127 LQKHGFVPELVTYNILIKGLCKA-GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 185
+++ P+ TYN ++ L A G++ A ++ + P+ T +++
Sbjct: 360 MEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEG 419
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT-DGVQLDIVSY 244
L++ + KG D Y T+I+ K GR +EA D + +M +G+ D +Y
Sbjct: 420 MLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTY 479
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHLEYMN 303
NT+I YC+EG++E A+ ++M ++ F+ D +T IL+ GLC+ G +K +L +++
Sbjct: 480 NTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWIS 539
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLP 359
K G + YN I+ L K+G+ + A ++ M+ K D +TY++++ L A R+
Sbjct: 540 K-GKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRME 598
Query: 360 S 360
+
Sbjct: 599 A 599
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 92/228 (40%), Gaps = 32/228 (14%)
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK----------------- 253
T I A+V R A +M ++ ++++ NTLIN +
Sbjct: 140 TSIGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNV 199
Query: 254 -----EGKLEAAYLLLDEMEKQGFEC--DKYTHTILID--GLCKAGNIKGARLHLEYMNK 304
+ KL A L+ +M + F C D ++ ++D LC++G + L + +
Sbjct: 200 IKFGVKNKLSEAIGLIGKM--KDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLE 257
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPS 360
G + YN I+ ++G+++ A M K D FT + ++ LC L +
Sbjct: 258 SGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDN 317
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
A KL + + G I ++ GL G EA + +++ K+
Sbjct: 318 ALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKL 365
>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 418
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 142/284 (50%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E LE G P ++ +N LMH + G+ A VF + L P +FN ++NG K
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ +Q G P++ TY++LI GLCK ++ A + E+ D+G PN +T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A D +++M
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG LE A+ M K+ D +T LI GLC+ G
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K G + + + M+
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 140/256 (54%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + + + + P VV++N+L+ G + L L + M G+ PDV++Y+ L++ L
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ K D+AN +F +M+ L P TF +++G CKN D A+ +++ + P+L
Sbjct: 217 CKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+TYN LI GLCK G L+ A+ ++ E+ G P+ ITYTT++ + + E
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKR 336
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M ++ D Y +I+ + GR +A + +M++ G++ +I +Y +IN +CK+G
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396
Query: 257 LEAAYLLLDEMEKQGF 272
+ LL EM++ G+
Sbjct: 397 VWTGSKLLKEMQRDGY 412
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 146/284 (51%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + + P V S+N+LM+ +LG D
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M + P T+++++NGLCK D+A +F + +G VP VT+ LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I K++ +P+ ITY T++ + K +++ M KG
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A +Y ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
L EM G + + T+T++I+ CK G++ L+ M + G+
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 124/271 (45%), Gaps = 31/271 (11%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
FNI+++ K A +F + K P +V++N L+ G K G L + +
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
SG P+ TY+ ++ + K E+ M G +G + T+I K GR+
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A + +QM++ + D+++YNTLI CK+G L+ A L+DEM +G + DK T+T LI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF 343
DG CK G+++ A EY ++ I I + D
Sbjct: 319 DGNCKEGDLETA---FEYRKRM---------------------IKENIRL-------DDV 347
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 348 AYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 136/300 (45%), Gaps = 4/300 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F+ ++ ++ + +A+ +R ++H F T +++ L K + +E
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+ G+ + + +M + + +L + A+ + + T++ ++K+G L
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
E M GVQ D+ +Y+ LIN CKE K++ A L DEM G + T T LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
DG CK G + A + M +L YN ++ L K G + A ++ + M +K
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D TY++++ CK L +A + +K +R+ A A++ GL G +A+K+
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 39/238 (16%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ Y + D G+ + N M+ +G+ PDV TY+ LI G + S + + +L DEML+ G
Sbjct: 177 LMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNG 236
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ P+ ++ +L+ HC + G+ D A +++ M+ L+P T+N ++ GLCK
Sbjct: 237 LVPNGVTFTTLIDGHC--KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQ 294
Query: 120 ALRMFRGLQKHGFVPELVTYNIL-----------------------------------IK 144
A + + G P+ +TY L I
Sbjct: 295 AQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALIS 354
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
GLC+ GR A +L+E+ G P TYT I+ + G ++L M+R GY
Sbjct: 355 GLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 418
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 146/292 (50%), Gaps = 1/292 (0%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E LE G P ++ +N LMH + G+ A VF + L P +FN ++NG K
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ +Q G P++ TY++LI GLCK ++ A + +E+ D+G PN +T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A D +++M
Sbjct: 245 TTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG LE A M K+ D +T LI GLC+ G
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYS 346
A L M +G + Y I++ K G + + + M+ +D + S
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ-RDGYVPS 415
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 140/256 (54%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + + + G+ P VV++N+L+ G + L L + M G+ PDV++Y+ L++ L
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ K ++AN +F++M+ L P TF +++G CKN A+ +++ + P+L
Sbjct: 217 CKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDL 276
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+TYN LI GLCK G L+ A+ ++ E+ G P+ ITYTT++ + +
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKR 336
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M ++ D Y +I+ + GR +A + +M++ G++ +I +Y +IN +CK+G
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396
Query: 257 LEAAYLLLDEMEKQGF 272
+ LL EM++ G+
Sbjct: 397 VWTGSKLLKEMQRDGY 412
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 146/284 (51%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + G+ P V S+N+LM+ +LG D
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLD 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M + P T+++++NGLCK ++A +F + +G VP VT+ LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I K++ +P+ ITY T++ + K +++ M KG
Sbjct: 249 DGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A Y ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
L EM G + + T+T++I+ CK G++ L+ M + G+
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 127/271 (46%), Gaps = 31/271 (11%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
FNI+++ K A +F + K G P +V++N L+ G K G L + +
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
SG P+ TY+ ++ + K + E+ M G +G + T+I K GR+
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVX 258
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A + +QM++ + D+++YNTLI CK+G L+ A L+DEM +G + DK T+T LI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF 343
DG CK G+++ A + + M K E++ + D
Sbjct: 319 DGSCKEGDLETAXXYRKRMIK------------------------------ENIRL-DDV 347
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 348 AYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 136/300 (45%), Gaps = 4/300 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F+ ++ ++ + +A+ +R ++H F T +++ L K + +E
Sbjct: 69 FSGLIIAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+ G+ + + +M + + +L + A+ + G + T++ ++K+G L
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLD 188
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
E M GVQ D+ +Y+ LIN CKE K+E A L +EM G + T T LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLI 248
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
DG CK G + A + M +L YN ++ L K G + A ++ + M +K
Sbjct: 249 DGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D TY++++ CK L +A +K +R+ A A++ GL G +A+K+
Sbjct: 309 PDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 99/202 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ + + M + G+ P+ VT+ +LI G +N + ++++ +ML
Sbjct: 211 VLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQ 270
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+ +YN+L++ L + G +A + +M L P T+ +++G CK + A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETA 330
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K + V Y LI GLC+ GR A +L+E+ G P TYT I+
Sbjct: 331 XXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 181 CFRNRKYKLGLEILSAMKRKGY 202
+ G ++L M+R GY
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGY 412
>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rhodocnemis]
Length = 428
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 151/285 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV+YN+L+ G R L L ML
Sbjct: 144 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLAS 203
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN +F +M+ L P TF +++G CKN D A
Sbjct: 204 GVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFA 263
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + +P+L+TYN LI GLCK G L+ A ++ E+ G P+ TYTT++
Sbjct: 264 MEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDG 323
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + E M ++ D Y +I+ + GR +A + +M++ G++ D
Sbjct: 324 CCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLKPD 383
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y +IN +CK+G + LL EM++ G T+ +L++G
Sbjct: 384 TGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 428
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 160/309 (51%), Gaps = 2/309 (0%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ ++ + + + D + + G+ P V SYN+
Sbjct: 120 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 179
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M+ + P T+++++NGLCK D+A +F + G
Sbjct: 180 LMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 239
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
+P VT+ LI G CK GR+ A I K + P+ ITY T++ + K
Sbjct: 240 LIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAH 299
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+++ M KG D F Y T+I K G L A ++ ++M+ + ++LD V+Y LI+
Sbjct: 300 DLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGL 359
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 310
C+EG+ A +L EM G + D T+T++I+ CK G++ KG++L L+ M + G +
Sbjct: 360 CQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKL-LKEMQRNGHAPS 418
Query: 311 LEAYNCIVD 319
+ YN +++
Sbjct: 419 VVTYNVLMN 427
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 137/284 (48%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E+LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 128 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 187
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
+ D R+ + G +P++ TY++LI GLCK ++ A + E+ G PN +T+
Sbjct: 188 GHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 247
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + +EI M + D Y T+I K G LK+A D +++M
Sbjct: 248 TTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 307
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D +Y TLI+ CKEG L+ A+ M ++ D + LI GLC+ G
Sbjct: 308 KGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVD 367
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K G + + + M+
Sbjct: 368 AEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQ 411
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 129/272 (47%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y + + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 110 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 169
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ ++Y T+M R G + SAM G D + Y +I K ++ +A
Sbjct: 170 LRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDAN 229
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ + V++ TLI+ +CK G+++ A + M Q D T+ LI GL
Sbjct: 230 ELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGL 289
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K A ++ M+ G + Y ++D K+G +D A + M + D
Sbjct: 290 CKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 349
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 350 VAYAALISGLCQEGRSVDAEKMLREMLSVGLK 381
>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 418
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 141/284 (49%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E LE G P ++ +N LMH + G+ A VF + L P +FN ++NG K
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ +Q G P++ TY++LI GLCK ++ A + E+ D G PN +T+
Sbjct: 185 GDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A D +++M+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G+ D ++Y TLI+ CKEG LE A+ M K+ D +T LI GLC+ G
Sbjct: 305 KGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K G + + + M+
Sbjct: 365 AEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 139/256 (54%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + + + + P VV++N+L+ G + L L + M G+ PDV++Y+ L++ L
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGL 216
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ K D+AN +F +M+ L P TF +++G CKN D A+ +++ + P+L
Sbjct: 217 CKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+TYN LI GLCK G L+ A+ ++ E+ G P+ ITYTT++ + + E
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKR 336
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M ++ D Y +I+ + GR +A + +M+ G++ +I +Y +IN +CK+G
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGD 396
Query: 257 LEAAYLLLDEMEKQGF 272
+ LL EM++ G+
Sbjct: 397 VWTGSKLLKEMQRDGY 412
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 145/284 (51%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + + P V S+N+LM+ +LG D
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M + P T+++++NGLCK D+A +F + G VP VT+ LI
Sbjct: 189 EGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I K++ +P+ ITY T++ + K +++ M KG
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLX 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A +Y ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
L EM G + + T+T++I+ CK G++ L+ M + G+
Sbjct: 369 LREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 137/300 (45%), Gaps = 4/300 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F+ ++ ++ + +A+ +R ++H F T +++ L K + +E
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+ G+ + + +M + + +L + A+ + + T++ ++K+G L
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
E M GVQ D+ +Y+ LIN CKE K++ A L DEM +G + T T LI
Sbjct: 189 EGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLI 248
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
DG CK G + A + M +L YN ++ L K G + A ++ + M +K
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLX 308
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D TY++++ CK L +A + +K +R+ A A++ GL G +A+K+
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 102/202 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ D + + M + G+ P+ VT+ +LI G +N + ++++ +ML
Sbjct: 211 VLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+ +YN+L++ L + G +A + +MI L P T+ +++G CK + A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETA 330
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K + V Y LI GLC+ GR A +L+E+ + G P TYT I+
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINE 390
Query: 181 CFRNRKYKLGLEILSAMKRKGY 202
+ G ++L M+R GY
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGY 412
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ D I +M +SPD++TYN+LI G + L + DL+DEM+ G
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y +L+ + G + A + MI ++ + +++GLC+ + +A
Sbjct: 307 LXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+M R + G PE+ TY ++I CK G + T +LKE+ G+ P+ +T
Sbjct: 367 KMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 199/400 (49%), Gaps = 5/400 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ + + + N M + +SP+ VTYN+LI G +L LLD M G
Sbjct: 1095 LINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAG 1154
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ + +Y +L++ L + K + A R+ + M D+ + ++++GLCKN D A+
Sbjct: 1155 LRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAV 1214
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + K G P+++TY+ LI G C+ G +++A+ I+ + SG N I Y+T++
Sbjct: 1215 QLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNF 1274
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ +++ + M G+ D F ++++ + G+L EA ++ M G+ +
Sbjct: 1275 CQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNS 1334
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y+ +IN Y G A+ D+M K G +T+ L+ GLCK GN+ A+ L
Sbjct: 1335 ITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNR 1394
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
++ I + YN ++ K G + A+ +F+ M + DS+TYSS++ LC+ +
Sbjct: 1395 LHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGK 1454
Query: 358 LPSASKLLLSCLKSGVRILKSAQ-KAVVDGLRHSGCRREA 396
+A L + + G +VDGL +G + A
Sbjct: 1455 AVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAA 1494
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 179/404 (44%), Gaps = 39/404 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C + +L +M E G P +VTYN+L+ + +++L+D M+
Sbjct: 989 ILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICK 1048
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI DV +YN + L + +A + + M ++P T+N ++NG K A
Sbjct: 1049 GIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVA 1108
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F + K P VTYN LI G C G A +L + +G N +TY T++
Sbjct: 1109 AQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNG 1168
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K++L +L M+ Y +I K G L EA + M DGV D
Sbjct: 1169 LCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPD 1228
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF---------------------------- 272
+++Y++LIN +C+ G +++A ++ M + G
Sbjct: 1229 VITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYA 1288
Query: 273 -------ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
D +T +L+ LC+ G + A L +M++IG N Y+CI++ G G
Sbjct: 1289 VMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIG 1348
Query: 326 KIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 365
+A + F+ M + FTY S++ LCK L A K L
Sbjct: 1349 DPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFL 1392
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 167/344 (48%), Gaps = 4/344 (1%)
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+G P V++ N ++ + + + + +F++M + P TFNI++NGLC
Sbjct: 943 VGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKK 1002
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + + ++++GFVP +VTYN L+ CK GR + A ++ + G + TY +
Sbjct: 1003 AGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFID 1062
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
N + +L M+++ + + Y T+I FVK G++ A +M +
Sbjct: 1063 NLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSP 1122
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ V+YN LI +C G E A LLD ME G ++ T+ L++GLCK + A+ L
Sbjct: 1123 NCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLL 1182
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI----NVFESMEVKDSFTYSSMVHNLCKA 355
E M AY ++D L K+G +D A+ N+++ D TYSS+++ C+
Sbjct: 1183 ERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRV 1242
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ SA +++ +SG+ + K ++ G EA K+
Sbjct: 1243 GNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKV 1286
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 162/353 (45%), Gaps = 39/353 (11%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
+++ M + GI P+V T+N LI G L + +LL +M E G P + +YN+L++
Sbjct: 969 WSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNW 1028
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
+ G+ A + MIC + T+N+ ++ LC N + A + + ++K P
Sbjct: 1029 YCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPN 1088
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
VTYN LI G K G++ A + E+ +PN +TY ++
Sbjct: 1089 EVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIG---------------- 1132
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
G+C V G +EA ++ M G++L+ V+Y TL+N CK
Sbjct: 1133 ------------GHCHV-------GDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHE 1173
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
K E A LL+ M +T+LIDGLCK G + A + M K G + ++ Y+
Sbjct: 1174 KFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYS 1233
Query: 316 CIVDRLGKDGKIDHAINV----FESMEVKDSFTYSSMVHNLCKAKRLPSASKL 364
+++ + G I A + + S V + YS++++N C+ + A K+
Sbjct: 1234 SLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKV 1286
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 188/410 (45%), Gaps = 5/410 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ D ++ M + G++PDV+TY+SLI G R + + +++ M
Sbjct: 1199 VLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRS 1258
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + Y++L++ Q G EA +V+ M C T N++++ LC++ A
Sbjct: 1259 GLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEA 1318
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + G VP +TY+ +I G G A ++ G P+ TY +++K
Sbjct: 1319 EKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKG 1378
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + L+ + D Y T++A K G L EA ++MV + V D
Sbjct: 1379 LCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPD 1438
Query: 241 IVSYNTLINLYCKEGKLEAAYLLL-DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+Y++L+ C++GK A L M + + +T L+DGL KAG+ K A
Sbjct: 1439 SYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFF 1498
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
E M K G + A+N I+D + G++ A + F +M + TY+ ++H K
Sbjct: 1499 EEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKK 1558
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
+ L L + ++ G+ K +++ GL SG K+ K+ M
Sbjct: 1559 QALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIM 1608
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 150/335 (44%), Gaps = 39/335 (11%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
++ L+ + G D A F+ + P T N++L + K++ T+ +FR +
Sbjct: 917 FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 976
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
G P + T+NILI GLC G L+ A +LK++ ++G P +TY T++
Sbjct: 977 DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLN--------- 1027
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
YC K GR K A + ++ M+ G++ D+ +YN I
Sbjct: 1028 -------------------WYC-------KKGRYKAAIELIDYMICKGIEADVCTYNVFI 1061
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
+ C + AYLLL +M K+ ++ T+ LI+G K G I A M+K
Sbjct: 1062 DNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLS 1121
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
N YN ++ G + A+ + + ME + TY ++++ LCK ++ A +L
Sbjct: 1122 PNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRL 1181
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L + + + A ++DGL +G EA ++
Sbjct: 1182 LERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQL 1216
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 189/408 (46%), Gaps = 5/408 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ + + ++M + + PD TY+SL+ G R ++ L + G
Sbjct: 1410 LLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRG 1469
Query: 62 -IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P+ Y L+ L + G P A F++M+ P T FN +++ + A
Sbjct: 1470 TLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKA 1529
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
F ++ G P L TYNIL+ G K L + + G P+ +T+ +++
Sbjct: 1530 NDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILG 1589
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ LG+++L M +G D F + +I + + G++++A D + M T GV D
Sbjct: 1590 LSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPD 1649
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+YN + N K+ + ++L EM + G + LI+G+C+ G+I+GA +
Sbjct: 1650 RDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKD 1709
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
M +GF S+ A + +V L GK + A+ V + M + T+++++H C+
Sbjct: 1710 EMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDA 1769
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++ A KL G+++ A ++ G+ +G A ++ ++R
Sbjct: 1770 KIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMR 1817
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 136/304 (44%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ MR G+ P++ TYN L+ G ++ L L L M+ GI PD +++SL+ L
Sbjct: 1532 FFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLS 1591
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G PD ++ MI TFNI++N ++ A + + G P+
Sbjct: 1592 KSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRD 1651
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN + GL K R + +L E+ ++G P Y T++ R + ++ M
Sbjct: 1652 TYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEM 1711
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ G+ ++ + G+ ++A ++ M+ + I ++ TL++ +C++ K+
Sbjct: 1712 EALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKI 1771
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A L ME G + D + +LI G+C G+ A E M N+ Y +
Sbjct: 1772 AEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVL 1831
Query: 318 VDRL 321
VD +
Sbjct: 1832 VDAI 1835
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 125/286 (43%), Gaps = 36/286 (12%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D G +L +M G D T+N LI + + + + DL++ M +G+ PD +YN +
Sbjct: 1597 DLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHI 1656
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ L + E+ V +M+ + P A + ++NG+C+ A ++ ++ GF
Sbjct: 1657 FNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGF 1716
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
V + +++GL G+ A +L + P T+TT+M R+ K
Sbjct: 1717 GSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAK------ 1770
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
I A+K KG M G++LD+V+YN LI C
Sbjct: 1771 IAEALKLKGV-----------------------------MELCGLKLDVVAYNVLIMGMC 1801
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARL 297
G AA+ L +EM + + T+ +L+D + A N I+G +L
Sbjct: 1802 ANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKL 1847
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 88/191 (46%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
+F +L+ M E G+ P Y +LI G R + + L DEM +G + +
Sbjct: 1665 AFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAES 1724
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+++ L GK ++A V M+ L P ATF +++ C++ AL++ ++
Sbjct: 1725 AMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELC 1784
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G ++V YN+LI G+C G A + +E+ PN TY ++ G
Sbjct: 1785 GLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQG 1844
Query: 191 LEILSAMKRKG 201
++L+ ++ +G
Sbjct: 1845 EKLLTDLQERG 1855
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 2/166 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ + + + M G V ++++ G ++ +LD ML M
Sbjct: 1691 LINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMR 1750
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P + ++ +LMH + K EA ++ M +CG L +N+++ G+C N + A
Sbjct: 1751 LLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCG-LKLDVVAYNVLIMGMCANGDSAAA 1809
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
++ ++ P + TY +L+ + A L +L +L + G
Sbjct: 1810 FELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERG 1855
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 76/170 (44%), Gaps = 4/170 (2%)
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
++ LI +Y KEG ++ A + + GF+ YT +++ + K + M+
Sbjct: 917 FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 976
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLP 359
G N+ +N +++ L +G + A N+ + ME V TY+++++ CK R
Sbjct: 977 DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 1036
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+A +L+ + G+ +D L + +A + K+R IS
Sbjct: 1037 AAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMIS 1086
>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 418
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 142/284 (50%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E LE G P ++ +N LMH + G+ A VF + L P +FN ++NG K
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ +Q G P++ TY++LI GLCK ++ A + E+ D+G PN +T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A D +++M
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG LE A+ M K+ D +T LI GLC+ G
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K G + + + M+
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 140/256 (54%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + + + + P VV++N+L+ G + L L + M G+ PDV++Y+ L++ L
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ K D+AN +F +MI L P TF +++G CKN D A+ +++ + P+L
Sbjct: 217 CKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+TYN LI GLCK G L+ A+ ++ E+ G P+ ITYTT++ + + E
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKR 336
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M ++ D Y +I+ + GR +A + +M++ G++ +I +Y +IN +CK+G
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396
Query: 257 LEAAYLLLDEMEKQGF 272
+ LL EM++ G+
Sbjct: 397 VWTGSKLLKEMQRDGY 412
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 146/284 (51%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + + P V S+N+LM+ +LG D
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M + P T+++++NGLCK D+A +F + +G VP VT+ LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I K++ +P+ ITY T++ + K +++ M KG
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A +Y ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
L EM G + + T+T++I+ CK G++ L+ M + G+
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 124/271 (45%), Gaps = 31/271 (11%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
FNI+++ K A +F + K P +V++N L+ G K G L + +
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
SG P+ TY+ ++ + K E+ M G +G + T+I K GR+
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A + +QM++ + D+++YNTLI CK+G L+ A L+DEM +G + DK T+T LI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF 343
DG CK G+++ A EY ++ I I + D
Sbjct: 319 DGNCKEGDLETA---FEYRKRM---------------------IKENIRL-------DDV 347
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 348 AYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 136/300 (45%), Gaps = 4/300 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F+ ++ ++ + +A+ +R ++H F T +++ L K + +E
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+ G+ + + +M + + +L + A+ + + T++ ++K+G L
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
E M GVQ D+ +Y+ LIN CKE K++ A L DEM G + T T LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLI 248
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
DG CK G + A + M +L YN ++ L K G + A ++ + M +K
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D TY++++ CK L +A + +K +R+ A A++ GL G +A+K+
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 108/238 (45%), Gaps = 39/238 (16%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ Y + D G+ + N M+ +G+ PDV TY+ LI G + S + + +L DEM++ G
Sbjct: 177 LMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNG 236
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ P+ ++ +L+ HC + G+ D A +++ M+ L+P T+N ++ GLCK
Sbjct: 237 LVPNGVTFTTLIDGHC--KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQ 294
Query: 120 ALRMFRGLQKHGFVPELVTYNIL-----------------------------------IK 144
A + + G P+ +TY L I
Sbjct: 295 AQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALIS 354
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
GLC+ GR A +L+E+ G P TYT I+ + G ++L M+R GY
Sbjct: 355 GLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 418
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 141/284 (49%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E LE G P ++ +N LMH + G+ A VF + L P +FN ++NG K
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ +Q G P++ TY++LI GLCK ++ A + E+ D G PN +T+
Sbjct: 185 GDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A D +++M+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G+ D ++Y TLI+ CKEG LE A+ M K+ D +T LI GLC+ G
Sbjct: 305 KGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K G + + + M+
Sbjct: 365 AEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 139/256 (54%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + + + + P VV++N+L+ G + L L + M G+ PDV++Y+ L++ L
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGL 216
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ K D+AN +F +M+ L P TF +++G CKN D A+ +++ + P+L
Sbjct: 217 CKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+TYN LI GLCK G L+ A+ ++ E+ G P+ ITYTT++ + + E
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKR 336
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M ++ D Y +I+ + GR +A + +M+ G++ +I +Y +IN +CK+G
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGD 396
Query: 257 LEAAYLLLDEMEKQGF 272
+ LL EM++ G+
Sbjct: 397 VWTGSKLLKEMQRDGY 412
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 145/284 (51%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + + P V S+N+LM+ +LG D
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M + P T+++++NGLCK D+A +F + G VP VT+ LI
Sbjct: 189 EGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I K++ +P+ ITY T++ + K +++ M KG
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLX 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A +Y ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
L EM G + + T+T++I+ CK G++ L+ M + G+
Sbjct: 369 LREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 138/300 (46%), Gaps = 4/300 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F+ ++ ++ + +A+ +R ++H F T +++ L K + +E
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+ G+ + + +M + + +L + A+ + + T++ ++K+G L
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
E M GVQ D+ +Y+ LIN CKE K++ A +L DEM +G + T T LI
Sbjct: 189 EGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLI 248
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
DG CK G + A + M +L YN ++ L K G + A ++ + M +K
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLX 308
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D TY++++ CK L +A + +K +R+ A A++ GL G +A+K+
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 102/202 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ D + + M + G+ P+ VT+ +LI G +N + ++++ +ML
Sbjct: 211 VLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+ +YN+L++ L + G +A + +MI L P T+ +++G CK + A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETA 330
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K + V Y LI GLC+ GR A +L+E+ + G P TYT I+
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINE 390
Query: 181 CFRNRKYKLGLEILSAMKRKGY 202
+ G ++L M+R GY
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGY 412
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ D I +M +SPD++TYN+LI G + L + DL+DEM+ G
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y +L+ + G + A + MI ++ + +++GLC+ + +A
Sbjct: 307 LXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+M R + G PE+ TY ++I CK G + T +LKE+ G+ P+ +T
Sbjct: 367 KMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 418
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 142/284 (50%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E LE G P ++ +N LMH + G+ A VF + L P +FN ++NG K
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ +Q G P++ TY++LI GLCK ++ A + E+ D+G PN +T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A D +++M
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG LE A+ M K+ D +T LI GLC+ G
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K G + + + M+
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 139/255 (54%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + + + + P VV++N+L+ G + L L + M G+ PDV++Y+ L++ L
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ K D+AN +F +M+ L P TF +++G CKN D A+ +++ + P+L
Sbjct: 217 CKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+TYN LI GLCK G L+ A+ ++ E+ G P+ ITYTT++ + + E
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKR 336
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M ++ D Y +I+ + GR +A + +M++ G++ +I +Y +IN +CK+G
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396
Query: 257 LEAAYLLLDEMEKQG 271
+ LL EM++ G
Sbjct: 397 VWTGSKLLKEMQRDG 411
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 145/283 (51%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + + P V S+N+LM+ +LG D
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M + P T+++++NGLCK D+A +F + +G VP VT+ LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I K++ +P+ ITY T++ + K +++ M KG
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A +Y ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
L EM G + + T+T++I+ CK G++ L+ M + G
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 124/271 (45%), Gaps = 31/271 (11%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
FNI+++ K A +F + K P +V++N L+ G K G L + +
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
SG P+ TY+ ++ + K E+ M G +G + T+I K GR+
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A + +QM++ + D+++YNTLI CK+G L+ A L+DEM +G + DK T+T LI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF 343
DG CK G+++ A EY ++ I I + D
Sbjct: 319 DGNCKEGDLETA---FEYRKRM---------------------IKENIRL-------DDV 347
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 348 AYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 136/300 (45%), Gaps = 4/300 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F+ ++ ++ + +A+ +R ++H F T +++ L K + +E
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+ G+ + + +M + + +L + A+ + + T++ ++K+G L
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
E M GVQ D+ +Y+ LIN CKE K++ A L DEM G + T T LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
DG CK G + A + M +L YN ++ L K G + A ++ + M +K
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D TY++++ CK L +A + +K +R+ A A++ GL G +A+K+
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 107/237 (45%), Gaps = 39/237 (16%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ Y + D G+ + N M+ +G+ PDV TY+ LI G + S + + +L DEML+ G
Sbjct: 177 LMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNG 236
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ P+ ++ +L+ HC + G+ D A +++ M+ L+P T+N ++ GLCK
Sbjct: 237 LVPNGVTFTTLIDGHC--KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQ 294
Query: 120 ALRMFRGLQKHGFVPELVTYNIL-----------------------------------IK 144
A + + G P+ +TY L I
Sbjct: 295 AQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALIS 354
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
GLC+ GR A +L+E+ G P TYT I+ + G ++L M+R G
Sbjct: 355 GLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 187/370 (50%), Gaps = 5/370 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I A+C+ + +++ + G+SP+++ Y+S+I+G + + + +LL+EM++
Sbjct: 871 LIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKN 930
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD-LTPCTATFNIMLNGLCKNRYTDN 119
G P+V+++ SL+H L + G + A R+F +I D P T+ M++G CK
Sbjct: 931 GWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSR 990
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +F +++ G VP TY LI G CKAG A +++ + + G PN TY +I+
Sbjct: 991 AEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVD 1050
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + + ++L+ + DG Y +I+ K + +A ++ +M G Q
Sbjct: 1051 GLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQP 1110
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DI Y TLI +C++ ++ + L DE+ K G K T+T +I G C+ + A
Sbjct: 1111 DIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFF 1170
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKA 355
+ M+ G + +Y ++ L K+ ++D A ++++M K T ++ + CK
Sbjct: 1171 QKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKT 1230
Query: 356 KRLPSASKLL 365
+ SA +L
Sbjct: 1231 EDFASAMVIL 1240
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 191/413 (46%), Gaps = 42/413 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRN---------------- 44
+L+ A + V + AG + + M G+ PD TY +I G RN
Sbjct: 803 ILVAAEMRLVEY-AG-NVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMER 860
Query: 45 -------------------SLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
SL++ ++ ++ +MG+ P++ +Y+S++ L + G +A
Sbjct: 861 GFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQA 920
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF-RGLQKHGFVPELVTYNILIK 144
+ ++M+ P T +++GLCK +T+ A R+F + ++ + P + TY +I
Sbjct: 921 FELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMIS 980
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
G CK +L A + + + + G PN TYTT++ + + E++ M +G+
Sbjct: 981 GYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFP 1040
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ Y +++ K GR +EA + + ++ D V+Y LI+ CK + A + L
Sbjct: 1041 NTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFL 1100
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
++M K GF+ D + +T LI C+ +K + + + K+G E Y ++ ++
Sbjct: 1101 NKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCRE 1160
Query: 325 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
K+ A+ F+ M DS +Y +++ LCK RL A +L + + G+
Sbjct: 1161 KKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGL 1213
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 164/357 (45%), Gaps = 38/357 (10%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
MR G+ N +I A L+ + ++ DEM G+ PD +Y ++ + G
Sbjct: 787 MRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGN 846
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
EA+R +M+ AT +++ C+ + A+ F + K G P L+ Y+
Sbjct: 847 VLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSS 906
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
+I GLCK G ++ A +L+E+ +G PN T+T+ ++ + +KG
Sbjct: 907 MISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTS----------------LIHGLCKKG 950
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+T F F+K+ R +D + ++ +Y +I+ YCKE KL A
Sbjct: 951 WTERAF------RLFLKLIR------------SDNYKPNVHTYTAMISGYCKEEKLSRAE 992
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+L + M++QG + T+T LIDG CKAGN A +E M+ GF N YN IVD L
Sbjct: 993 MLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGL 1052
Query: 322 GKDGKIDHAINV----FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
K G+ + A + F++ D TY+ ++ CK + A L K G +
Sbjct: 1053 CKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQ 1109
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 135/290 (46%), Gaps = 11/290 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I YC+ + RM+E G+ P+ TY +LI G + S + +L++ M G
Sbjct: 978 MISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEG 1037
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEA----NRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
P+ +YNS++ L + G+ +EA N FQ+ I D T+ I+++ CK
Sbjct: 1038 FFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEAD----GVTYTILISEQCKRADM 1093
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
+ AL + K GF P++ Y LI C+ ++ + + E+ G AP TYT++
Sbjct: 1094 NQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSM 1153
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ R +K L ++ M G D Y +I+ K RL EA + M+ G+
Sbjct: 1154 ICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGL 1213
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
V+ TL YCK +A ++L+ + K+ + + HT LI LC
Sbjct: 1214 SPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLW--IRTVHT-LIRKLC 1260
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 132/289 (45%), Gaps = 4/289 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HC 75
L +R P+V TY ++I+G + LS + L + M E G+ P+ +Y +L+ HC
Sbjct: 959 FLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHC 1018
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
+ G +A + + M P T T+N +++GLCK + A ++ ++ +
Sbjct: 1019 --KAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEAD 1076
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
VTY ILI CK + A L ++ G P+ YTT++ R K ++
Sbjct: 1077 GVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFD 1136
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
+ + G Y ++I + + ++ A + ++M G D +SY LI+ CKE
Sbjct: 1137 EVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKES 1196
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
+L+ A L D M +G + T L CK + A + LE +NK
Sbjct: 1197 RLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNK 1245
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 35/200 (17%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ + LN+M + G PD+ Y +LIA R +++ S L DE++++
Sbjct: 1082 ILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKL 1141
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P +Y S MIC G C+ + A
Sbjct: 1142 GLAPTKETYTS--------------------MIC---------------GYCREKKVSLA 1166
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ F+ + HG P+ ++Y LI GLCK RL AR + + D G +P +T T+
Sbjct: 1167 VKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYE 1226
Query: 181 CFRNRKYKLGLEILSAMKRK 200
+ + + IL + +K
Sbjct: 1227 YCKTEDFASAMVILERLNKK 1246
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 41/200 (20%)
Query: 212 VIAAFVKIGRLKEATDYM-----------------------------------EQMVTDG 236
++ F +IG+LKEA D + ++M G
Sbjct: 767 MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 826
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
V D +Y +I YC+ G + A + EM ++GF D T T++I C+ + A
Sbjct: 827 VYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAV 886
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-----FTYSSMVHN 351
+ K+G NL Y+ ++ L K G + A + E M VK+ +T++S++H
Sbjct: 887 WFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEM-VKNGWKPNVYTHTSLIHG 945
Query: 352 LCKAKRLPSASKLLLSCLKS 371
LCK A +L L ++S
Sbjct: 946 LCKKGWTERAFRLFLKLIRS 965
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 195/418 (46%), Gaps = 30/418 (7%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD------ 55
L+ AYC+ + Y + +M + G P + YN I N L S DLL+
Sbjct: 348 LVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGS-DLLELAEKAY 406
Query: 56 -EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
EML++G+ + + ++ CL GK D+A + +M+ P +T++ ++ LC
Sbjct: 407 SEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDA 466
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
+ A +F ++K+G VP + TY ILI CKAG ++ AR E+ PN +TY
Sbjct: 467 SKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTY 526
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
T+++ + RK ++ M +G + Y +I K G++ +A +M
Sbjct: 527 TSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQG 586
Query: 235 DGVQLD----------------IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
D D I++Y L++ CK ++E A+ LLD M G E ++
Sbjct: 587 DIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIV 646
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+ LIDG CK G ++ A+ M++ G+ NL Y+ +++ L K+ ++D + V M
Sbjct: 647 YDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKM- 705
Query: 339 VKDSFT-----YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+++S T Y+ M+ LCK + A +L+L + G A++DG G
Sbjct: 706 LENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIG 763
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 207/461 (44%), Gaps = 61/461 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID++C+ + M +P+VVTY SLI + + + L + ML
Sbjct: 493 ILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLE 552
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDL-----------------TPCT 101
G P+V +Y +L+ HC + G+ D+A +++ M GD+ TP
Sbjct: 553 GSKPNVVTYTALIDGHC--KAGQIDKACQIYARMQ-GDIESSDIDMYFKLDDNDCETPNI 609
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
T+ +++GLCK + A + + +G P + Y+ LI G CK G+L A+ + +
Sbjct: 610 ITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVK 669
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ + G+ PN TY++++ F+ ++ L L++LS M T + Y +I K+G+
Sbjct: 670 MSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGK 729
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
+EA M +M G ++++Y +I+ + K GK+E L +M +G + T+ +
Sbjct: 730 TEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRV 789
Query: 282 LIDGLCKAGNIKGAR------------------------LHLEYMNKIGFDSNLEA---- 313
LI+ C G + A + E++ IG L
Sbjct: 790 LINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIGLLDELSENESV 849
Query: 314 -----YNCIVDRLGKDGKIDHAINVFE------SMEVKDSFTYSSMVHNLCKAKRLPSAS 362
Y ++D K G+++ A+N+ E S+ V + + Y+S++ +L A ++ A
Sbjct: 850 PVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKAF 909
Query: 363 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+L S + V S ++ GL G +EA ++ I
Sbjct: 910 ELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSDSI 950
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 177/411 (43%), Gaps = 26/411 (6%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
L+ + + PD V YN +++G SL ++D+LD M + P+V +Y L+
Sbjct: 260 LSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLG 319
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
G+ R+ M+ P FN +++ CK+R A ++F+ + K G P +
Sbjct: 320 KGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLL 379
Query: 139 YNILIKGLCK------AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
YNI I +C + L A E+ D G N + + +C K+ E
Sbjct: 380 YNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFE 439
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
I+ M KG+ D Y VI ++++A E+M +G+ + +Y LI+ +C
Sbjct: 440 IICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFC 499
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K G ++ A DEM + + T+T LI KA + A E M G N+
Sbjct: 500 KAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVV 559
Query: 313 AYNCIVDRLGKDGKIDHAINVFESM--------------------EVKDSFTYSSMVHNL 352
Y ++D K G+ID A ++ M E + TY ++V L
Sbjct: 560 TYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGL 619
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
CKA R+ A +LL + +G + A++DG +G A+++ K+
Sbjct: 620 CKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKM 670
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 202/464 (43%), Gaps = 61/464 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ C+ F IL+RMR P+VVTY L++G L +L M+ G
Sbjct: 278 MVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEG 337
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR------ 115
P+ +NSL+H + A ++F+ MI P +NI + +C N
Sbjct: 338 CYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSD 397
Query: 116 --------YT---------------------------DNALRMFRGLQKHGFVPELVTYN 140
Y+ D A + + GFVP+ TY+
Sbjct: 398 LLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYS 457
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
+I LC A ++ A + +E+ +G P+ TYT ++ + + M R
Sbjct: 458 KVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRD 517
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
T + Y ++I A++K ++ +A E M+ +G + ++V+Y LI+ +CK G+++ A
Sbjct: 518 NCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKA 577
Query: 261 YLLLDEMEK--QGFECDKY--------------THTILIDGLCKAGNIKGARLHLEYMNK 304
+ M+ + + D Y T+ L+DGLCKA ++ A L+ M+
Sbjct: 578 CQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSV 637
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPS 360
G + N Y+ ++D K GK+++A VF M + + +TYSS++++L K KRL
Sbjct: 638 NGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDL 697
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
K+L L++ ++DGL G EA ++ K+
Sbjct: 698 VLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKME 741
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 186/416 (44%), Gaps = 17/416 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
LI C+ ++ L R+++ G TYN+LI R L + + EM
Sbjct: 175 FLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNS 234
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D + + L + G+ +A + + + P T +N M++GLC+ A
Sbjct: 235 GFRMDGCTLGCFAYSLCKAGRCGDALSLLEK---EEFVPDTVFYNRMVSGLCEASLFQEA 291
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + ++ +P +VTY IL+ G G+L + IL + G PN + +++
Sbjct: 292 MDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHA 351
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME-------QMV 233
++R Y ++ M + G Y I + L +D +E +M+
Sbjct: 352 YCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELP-GSDLLELAEKAYSEML 410
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
GV L+ V+ + C GK + A+ ++ EM +GF D T++ +I LC A ++
Sbjct: 411 DLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVE 470
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-----FTYSSM 348
A L E M K G ++ Y ++D K G I A N F+ M ++D+ TY+S+
Sbjct: 471 KAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEM-LRDNCTPNVVTYTSL 529
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+H KA+++ A+KL L G + A++DG +G +A +I ++++
Sbjct: 530 IHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQ 585
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 129/337 (38%), Gaps = 44/337 (13%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
N ++ C+N + AL L+ G+ TYN LI+ +A +L TA + +E+
Sbjct: 173 LNFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMS 232
Query: 164 DSG--------------------------------HAPNAITYTTIMKCCFRNRKYKLGL 191
+SG P+ + Y ++ ++ +
Sbjct: 233 NSGFRMDGCTLGCFAYSLCKAGRCGDALSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAM 292
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+IL M+ + Y +++ + G+L + M+T+G + +N+L++ Y
Sbjct: 293 DILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAY 352
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK------- 304
CK AY L +M K G + + I I +C + G+ L LE K
Sbjct: 353 CKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDL-LELAEKAYSEMLD 411
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPS 360
+G N + L GK D A + M V D TYS ++ LC A ++
Sbjct: 412 LGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEK 471
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
A L K+G+ ++D +G ++A+
Sbjct: 472 AFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQAR 508
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 91/230 (39%), Gaps = 27/230 (11%)
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKG--LCKAGRLRTARWILKELGDSGHAPNAITY 174
T N LR FRG V E++ L+K C L W +++G S H P
Sbjct: 87 TQNFLRQFRGRLSEPLVVEVMN---LVKHPEFCVEFFL----WASRQIGYS-HTPVVYNA 138
Query: 175 TTIMKCCFRNRKYKLGLEILSAMK-------RKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
+ CC ++ + L ++ RK F +I + G A +
Sbjct: 139 LIELLCCNAVNNDRVSHKFLMQIRDDDRELLRKLLNF-------LIQKCCRNGMWNVALE 191
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
+ ++ G + +YN LI ++ + KL+ A+L+ EM GF D T LC
Sbjct: 192 ELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLC 251
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
KAG A L + K F + YN +V L + A+++ + M
Sbjct: 252 KAGRCGDA---LSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRM 298
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 193/426 (45%), Gaps = 42/426 (9%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
L RM+ AGI PD+V+YN LI G + +L+L+ EM G PPD SY ++M L
Sbjct: 289 FLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLC 348
Query: 78 QLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF---- 132
+ K +E R+ ++M+ +L P T+N ++ L K+ + D+AL R ++ GF
Sbjct: 349 KDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDK 408
Query: 133 -------------------------------VPELVTYNILIKGLCKAGRLRTARWILKE 161
P++VTY +I G C+ G++ A+ +L++
Sbjct: 409 VGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQ 468
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ G PN +TYT ++ N K E+++ + +T + Y V+ + G+
Sbjct: 469 MYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGK 528
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
L EA D +M+ G + V N LI C+ + A L+E +G + T
Sbjct: 529 LSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTS 588
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 340
+I G C+ G++ A LE M + Y + D LGK ++D A + M K
Sbjct: 589 VIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKG 648
Query: 341 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
TY +++H C+ R+ KLL + + K+ V++ L + G R EA+
Sbjct: 649 IDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIAR--QPFKTVYNQVIEKLCYFGNREEAE 706
Query: 398 KIQSKI 403
K+ K+
Sbjct: 707 KLLGKV 712
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 178/362 (49%), Gaps = 9/362 (2%)
Query: 18 ILNRMREAGI--SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
IL M GI SP+ +Y ++ +R +L +L +L M + G+ PD+ N+ ++
Sbjct: 219 ILRLMTRRGIERSPEAFSY--VMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYV 276
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
L + K ++A R + M + P ++N ++ G C D+AL + + G P+
Sbjct: 277 LVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPD 336
Query: 136 LVTYNILIKGLCKAGRLRTARWILKEL-GDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
V+Y ++ LCK ++ + +++ + +S P+ +TY T++ ++ L L
Sbjct: 337 KVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFL 396
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
+ KG+ D GY V+ +F K + +A + M + G D+V+Y +I+ +C+
Sbjct: 397 REAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRV 456
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
GK++ A +L +M K G + + T+T+L++GLC G AR + + + N Y
Sbjct: 457 GKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITY 516
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
+ ++ L ++GK+ A ++ M K + + ++ +LC+ + + A K L CL
Sbjct: 517 SAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLH 576
Query: 371 SG 372
G
Sbjct: 577 KG 578
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 148/320 (46%), Gaps = 2/320 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI A + D L E G D V Y++++ +N + + L+ +M G
Sbjct: 379 LIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKG 438
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV +Y +++ ++GK DEA ++ Q M P T T+ ++LNGLC N + A
Sbjct: 439 CNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAR 498
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M ++H + P +TY+ ++ GL + G+L A + +E+ + G PN + +++
Sbjct: 499 EMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSL 558
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
RN+ + L KG + + +VI F +IG L A +E M D
Sbjct: 559 CRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDA 618
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y TL + K+ +L+ A L+ +M +G + T+ +I C+ G + LE
Sbjct: 619 ITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEK 678
Query: 302 MNKIGFDSNLEAYNCIVDRL 321
M I YN ++++L
Sbjct: 679 M--IARQPFKTVYNQVIEKL 696
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 164/350 (46%), Gaps = 9/350 (2%)
Query: 30 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI--PPDVWSYNSLMHCLFQLGKPDEANR 87
D + Y +++ ++ L + +L M GI P+ +SY +M + G A R
Sbjct: 196 DAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSY--VMVSYSRAGMLRNALR 253
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
+ M + P + N + L K + ALR ++ G P++V+YN LIKG C
Sbjct: 254 ILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYC 313
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM-KRKGYTFDG 206
R+ A ++ E+ G P+ ++Y T+M ++RK + ++ M + D
Sbjct: 314 DVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQ 373
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T+I A K G +A ++ + G +D V Y+ +++ +CK ++ A L+ +
Sbjct: 374 VTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVID 433
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M +G D T+T +IDG C+ G I A+ L+ M K G N Y +++ L +GK
Sbjct: 434 MYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGK 493
Query: 327 IDHA---INVFES-MEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
A INV E ++ TYS+++H L + +L A L ++ G
Sbjct: 494 SLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKG 543
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 133/294 (45%), Gaps = 2/294 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID +C+ D +L +M + G P+ VTY L+ G N + ++++ E
Sbjct: 449 IIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHW 508
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y+++MH L + GK EA + ++MI P N+++ LC+N+ A
Sbjct: 509 WTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAK 568
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ G +V + +I G C+ G L A +L+++ S P+AITYTT+
Sbjct: 569 KYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDAL 628
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + E++ M KG Y VI F + GR+ + +E+M+ Q
Sbjct: 629 GKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIAR--QPFK 686
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
YN +I C G E A LL ++ + + D T ILI+ GN A
Sbjct: 687 TVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLIDGNALSA 740
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 136/302 (45%), Gaps = 5/302 (1%)
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
+ ML+ L K R A R+ R + + G ++ ++ +AG LR A IL +
Sbjct: 199 VYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLM 258
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
+G P+ T + + K + L L MK G D Y +I + + R+
Sbjct: 259 QKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRI 318
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDKYTHTI 281
+A + + +M G D VSY T++ CK+ K+E L++ M + D+ T+
Sbjct: 319 DDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNT 378
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 340
LI L K G+ A + L + GF + Y+ +VD K+ ID A ++ M K
Sbjct: 379 LIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKG 438
Query: 341 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
D TY++++ C+ ++ A K+L K G + +++GL H+G EA+
Sbjct: 439 CNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAR 498
Query: 398 KI 399
++
Sbjct: 499 EM 500
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 46/277 (16%)
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY--TFDGFGYC----------------- 210
+AI Y T++ + R + IL M R+G + + F Y
Sbjct: 196 DAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRIL 255
Query: 211 ----------------TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
T I VK +L++A ++E+M G++ DIVSYN LI YC
Sbjct: 256 TLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDV 315
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL--- 311
+++ A L+ EM +G DK ++ ++ LCK ++ + +E M + +SNL
Sbjct: 316 HRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQ---NSNLIPD 372
Query: 312 -EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
YN ++ L K G D A+ E K D YS++V + CK K + A L++
Sbjct: 373 QVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVI 432
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
G A++DG G EAKK+ ++
Sbjct: 433 DMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQM 469
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 99/240 (41%), Gaps = 2/240 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + C+ + L G + +VV + S+I G + L +L +L++M
Sbjct: 553 LLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLS 612
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PD +Y +L L + + DEA+ + M+ + P T+ +++ C+ D+
Sbjct: 613 NKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDM 672
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + P YN +I+ LC G A +L ++ + +A T +++
Sbjct: 673 MKLLEKMIARQ--PFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIES 730
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ M R+ D V V G EA D M + V G+Q +
Sbjct: 731 YLIDGNALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGMPAEADDLMLRFVERGIQTE 790
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 4/168 (2%)
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
Y D Y T++ K + A + M G++ +++ ++ Y + G L A
Sbjct: 193 YRHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNAL 252
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+L M+K G E D I L K ++ A LE M G + ++ +YNC++
Sbjct: 253 RILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGY 312
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
+ID A+ + M K D +Y +++ LCK +++ +L+
Sbjct: 313 CDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLM 360
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 198/438 (45%), Gaps = 37/438 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI A C DA + + M E G P+ T+ L+ G + L L+LL+ M
Sbjct: 152 LLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESF 211
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ YN+++ + G+ D++ ++ + M L P TFN ++ LCK +A
Sbjct: 212 GVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDA 271
Query: 121 LRMFRGLQKHGFV----PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
R+F ++ ++ P +TYN+++KG CK G L A+ + + + ++ + +Y
Sbjct: 272 SRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNI 331
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ R+ K+ +L M KG + Y ++ K+G L +A + M +G
Sbjct: 332 WLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNG 391
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
V D V+Y L++ YC GK++AA LL EM + + YT IL+ L K G I A
Sbjct: 392 VCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAE 451
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----------------- 339
L MN+ G+ + N IVD L G++D AI + + M V
Sbjct: 452 ELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLV 511
Query: 340 ----------KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
D TYS++++ LCKA R A L + ++ A + H
Sbjct: 512 DDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFI----H 567
Query: 390 SGCRREAKKIQSKIRMAK 407
C++ KI S R+ K
Sbjct: 568 HFCKQ--GKISSAFRVLK 583
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 200/439 (45%), Gaps = 31/439 (7%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ TI+ M+ G+ PD VTY L+ G + + LL EM+
Sbjct: 366 ILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRN 425
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+ ++ N L+H L+++G+ EA + + M T T NI+++GLC + D A
Sbjct: 426 NCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKA 485
Query: 121 LRMFRGLQKHGF-----------------------VPELVTYNILIKGLCKAGRLRTARW 157
+ + +G++ HG +P+L+TY+ L+ GLCKAGR A+
Sbjct: 486 IEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKN 545
Query: 158 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 217
+ E+ P+++ Y + + K +L M++KG Y ++I
Sbjct: 546 LFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLG 605
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 277
++ E M++M G+ +I +YNT I C+ K+E A LLDEM ++ + +
Sbjct: 606 IKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVF 665
Query: 278 THTILIDGLCKAGNIKGARLHLEYMNKI-GFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
+ LI+ CK + A+ E I G L Y+ + + L G++ A + E+
Sbjct: 666 SFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL--YSLMFNELLAAGQLLKATELLEA 723
Query: 337 MEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 392
+ + +F Y +V +LCK L AS +L + G +A V+DGL G
Sbjct: 724 VLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGN 783
Query: 393 RREAKKIQSK-IRMAKISH 410
++EA K + MA +
Sbjct: 784 KKEANSFADKMMEMASVGE 802
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 200/466 (42%), Gaps = 101/466 (21%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ YC+ D G +LN M G+ P+ V YN++++ R S ++++M E
Sbjct: 187 ILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREE 246
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM----ICGDLTPCTATFNIMLNGLCKNRY 116
G+ PD+ ++NS + L + GK +A+R+F DM G P + T+N+ML G CK
Sbjct: 247 GLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGL 306
Query: 117 TDNALRMF-------------------RGLQKHG-FV---------------PELVTYNI 141
++A +F +GL +HG F+ P + +YNI
Sbjct: 307 LEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNI 366
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITY----------------TTIMKCCFRNR 185
L+ GLCK G L A+ I+ + +G P+A+TY ++++ RN
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426
Query: 186 --------------KYKLGL-----EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
+K+G E+L M KGY D ++ G L +A
Sbjct: 427 CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486
Query: 227 DYMEQMVTDGVQL-----------------------DIVSYNTLINLYCKEGKLEAAYLL 263
+ ++ M G D+++Y+TL+N CK G+ A L
Sbjct: 487 EIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNL 546
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
EM + + D + I I CK G I A L+ M K G +LE YN ++ LG
Sbjct: 547 FAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGI 606
Query: 324 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
+I + + M+ K + TY++ + LC+ +++ A+ LL
Sbjct: 607 KNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLL 652
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 178/395 (45%), Gaps = 8/395 (2%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
L R R P V YN L+ + + L +M+ GI P +++N L+ L
Sbjct: 100 LVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCD 159
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
D A +F +M P TF I++ G CK TD L + ++ G +P V
Sbjct: 160 SSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVI 219
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
YN ++ C+ GR + +++++ + G P+ +T+ + + + K I S M+
Sbjct: 220 YNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME 279
Query: 199 RKGY----TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
Y + Y ++ F K+G L++A E + + + SYN + +
Sbjct: 280 LDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRH 339
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
GK A +L +M +G Y++ IL+DGLCK G + A+ + M + G + Y
Sbjct: 340 GKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTY 399
Query: 315 NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
C++ GK+D A ++ + M + +++T + ++H+L K R+ A +LL +
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNE 459
Query: 371 SGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
G + +VDGL SG +A +I +R+
Sbjct: 460 KGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRV 494
>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
Length = 698
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 180/375 (48%), Gaps = 7/375 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ C + G ++ G P V YN LI G R + L LL EM
Sbjct: 86 VMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETK 145
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P V +Y +++H L + G + + +M L+P +N ++N LCK R A
Sbjct: 146 GIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQA 205
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK- 179
M + K F P++VT+N +I G C+ G +R A +L+E G PN ++YT ++
Sbjct: 206 SDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHG 265
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
C R + ++L M +G+T D +I V G++ +A E+M V
Sbjct: 266 FCVRGEAM-VASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMP 324
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D YN LI+ CK+ L AA LL+EM +Q + DK+ +T LIDG ++ + AR
Sbjct: 325 DANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIF 384
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
E+M + ++ AYN ++ K G + A+ SM + D FTY+++V K
Sbjct: 385 EFMEEKAC-PDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKK 443
Query: 356 KRLPSASKLLLSCLK 370
+ ++ +LL +K
Sbjct: 444 GDISASLRLLCDMMK 458
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 182/442 (41%), Gaps = 88/442 (19%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG----------------ATRNS 45
+I+A C+ S +LN+M ++ +PDVVT+N++IAG A R
Sbjct: 192 VINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRG 251
Query: 46 LLSCSL-------------------DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
L L DLL EM+ G PD+ + +L+H L G+ ++A
Sbjct: 252 LEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDAL 311
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH--------------GF 132
V + M + P +N++++GLCK R A + + + GF
Sbjct: 312 IVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGF 371
Query: 133 V--------------------PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
V P++V YN++IKG CK G ++ A + + +G P+
Sbjct: 372 VRSDKLSDARKIFEFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEF 431
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
TYTT++ + L +L M ++ + F Y ++I + IG A D +M
Sbjct: 432 TYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKM 491
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL--CKAG 290
++G+ ++V Y LI K+ K+ A + M + T L++GL C+ G
Sbjct: 492 QSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHG 551
Query: 291 NIKGARLHLEYMNKI-------------GFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
+ R + ++ G D + AYN I+ L + + A+++ + M
Sbjct: 552 MVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKM 611
Query: 338 EVK----DSFTYSSMVHNLCKA 355
K D T+ S+++ A
Sbjct: 612 SNKGCLPDPITFLSLLYGFSSA 633
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 144/317 (45%), Gaps = 4/317 (1%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 112
L EML D +S ++ L G+ +E + + P +N++++G C
Sbjct: 68 LYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYC 127
Query: 113 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
+ L + ++ G +P +VTY +I L + G L +L E+ G +PN
Sbjct: 128 RRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQ 187
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
Y T++ + R ++L+ M + + D + T+IA F + G ++EA + +
Sbjct: 188 IYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREA 247
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
+ G++ + +SY LI+ +C G+ A LL EM +G D T LI GL +G +
Sbjct: 248 IRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQV 307
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EVK---DSFTYSSM 348
A + E M + + YN ++ L K + A N+ E M E K D F Y+++
Sbjct: 308 NDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTL 367
Query: 349 VHNLCKAKRLPSASKLL 365
+ ++ +L A K+
Sbjct: 368 IDGFVRSDKLSDARKIF 384
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 50/228 (21%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I YC+F T ++ MR+AG PD TY +L+ G + +S SL LL +M++
Sbjct: 400 VMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKR 459
Query: 61 GIPPDVWSYNSLM--HC---------------------------------LFQLGKPDEA 85
P++++Y SL+ +C LF+ K +A
Sbjct: 460 RCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQA 519
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRY---------TDNA------LRMFRGLQKH 130
F+ M+ P AT + ++NGL R+ T A L +FRGL
Sbjct: 520 AAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISD 579
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
G P + YN +I LC+ L A + ++ + G P+ IT+ +++
Sbjct: 580 GLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLL 627
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 172/338 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ + + D +++L ++ + G PD VT++SLI G + +++ DEM+
Sbjct: 124 ILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVAS 183
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P++ +YN+++ ++GK A + + M P +N +++GLCK+R A
Sbjct: 184 GYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEA 243
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F ++ G P++ TY+IL+ GLC + + A + E+ P+ +T+ ++
Sbjct: 244 LDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDK 303
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ I+ M KG + Y +++ + ++ EA + M+T G +
Sbjct: 304 LCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPN 363
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+VSYN LIN YCK +++ A L DEM +G + + + LI GLC+AG AR +
Sbjct: 364 VVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFK 423
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
M G +L ++D L K G +D+A+ +F +M+
Sbjct: 424 DMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQ 461
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 177/363 (48%), Gaps = 4/363 (1%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
C + + N M P +V ++ L++ R L L + + I DV
Sbjct: 60 CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
+ +N L++C +L + D A V +I P TF+ ++NGLC A+ F
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
+ G+ P L TYN +IKG CK G+ A +LK++ +G P+ + Y TI+ ++R
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
L+I S +K KG D F Y ++ + +EA+ +M++ + D+V++N
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
L++ CKEG L A ++ M ++G E + T+ L++G C + AR+ + M G
Sbjct: 300 LVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKG 359
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSAS 362
N+ +YN +++ K +ID A +F+ M + ++F Y++++ LC+A R A
Sbjct: 360 CMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAR 419
Query: 363 KLL 365
+L
Sbjct: 420 ELF 422
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 155/326 (47%), Gaps = 35/326 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I +C+ +L +M +AG PD+V YN++I G ++ L+S +LD+ E+ G
Sbjct: 195 IIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKG 254
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV++Y+ LMH L + +EA+ +F +M+ ++ P TFNI+++ LCK A
Sbjct: 255 VRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQ 314
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + + G P TYN L+ G C ++ AR + + G PN ++Y ++
Sbjct: 315 GIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILIN-- 372
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
GYC K R+ EA + ++M G+ +
Sbjct: 373 --------------------------GYC-------KAQRIDEARELFDEMSFRGLIPNT 399
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YNTLI+ C+ G+ A L +M+ QG D T TIL+D LCK G + A
Sbjct: 400 FNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRA 459
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKI 327
M NL Y+ ++ + K GKI
Sbjct: 460 MQDSCLKPNLVTYDILIRAMYKSGKI 485
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 181/380 (47%), Gaps = 8/380 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + + ++ R+ I DV +N LI +R + + +L +++++G
Sbjct: 90 LLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLG 149
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +++SL++ L K A F +M+ P T+N ++ G CK T A+
Sbjct: 150 FEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAV 209
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + K G P++V YN +I GLCK + A I E+ G P+ TY+ +M
Sbjct: 210 GLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGL 269
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + + + M D + ++ K G L EA ++ M+ GV+ +
Sbjct: 270 CNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNY 329
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN+L+N YC + K+ A ++ D M +G + ++ ILI+G CKA I AR +
Sbjct: 330 ATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDE 389
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M+ G N YN ++ L + G+ A +F+ M+ + D T + ++ +LCK
Sbjct: 390 MSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGY 449
Query: 358 LPSASKLLL----SCLKSGV 373
L +A +L SCLK +
Sbjct: 450 LDNALRLFRAMQDSCLKPNL 469
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 107/222 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C + + N M I PDVVT+N L+ + +LS + ++ M+E
Sbjct: 264 ILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEK 323
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ +YNSLM+ K EA VF MI P ++NI++NG CK + D A
Sbjct: 324 GVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEA 383
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G +P YN LI GLC+AGR AR + K++ G +P+ +T T ++
Sbjct: 384 RELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDS 443
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
+ L + AM+ + Y +I A K G++
Sbjct: 444 LCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 4/192 (2%)
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+++A V+I +++ ++ D+ +N LIN + + +++ A+ +L ++ K G
Sbjct: 90 LLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLG 149
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
FE D T + LI+GLC A + M G+ NL YN I+ K GK A+
Sbjct: 150 FEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAV 209
Query: 332 NVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ + M+ D Y++++ LCK + + A + GVR ++ GL
Sbjct: 210 GLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGL 269
Query: 388 RHSGCRREAKKI 399
+S + EA +
Sbjct: 270 CNSDQKEEASAL 281
>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 418
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 142/284 (50%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E LE G P ++ +N LMH + G+ A VF + L P +FN ++NG K
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ +Q G P++ TY++LI GLCK ++ A + E+ D+G PN +T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A D +++M
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG LE A+ M K+ D +T LI GLC+ G
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K G + + + M+
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 140/256 (54%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + + + + P VV++N+L+ G + L L + M G+ PDV++Y+ L++ L
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ K D+AN +F +M+ L P TF +++G CKN D A+ +++ + P+L
Sbjct: 217 CKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDL 276
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+TYN LI GLCK G L+ A+ ++ E+ G P+ ITYTT++ + + E
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKR 336
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M ++ D Y +I+ + GR +A + +M++ G++ +I +Y +IN +CK+G
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396
Query: 257 LEAAYLLLDEMEKQGF 272
+ LL EM++ G+
Sbjct: 397 VWTGSKLLKEMQRDGY 412
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 145/284 (51%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + + P V S+N+LM+ +LG D
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M + P T+++++NGLCK D+A +F + +G VP VT+ LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I K + +P+ ITY T++ + K +++ M KG
Sbjct: 249 DGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A +Y ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
L EM G + + T+T++I+ CK G++ L+ M + G+
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 123/271 (45%), Gaps = 31/271 (11%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
FNI+++ K A +F + K P +V++N L+ G K G L + +
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
SG P+ TY+ ++ + K E+ M G +G + T+I K GR+
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A + + M++ + D+++YNTLI CK+G L+ A L+DEM +G + DK T+T LI
Sbjct: 259 LAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF 343
DG CK G+++ A EY ++ I I + D
Sbjct: 319 DGNCKEGDLETA---FEYRKRM---------------------IKENIRL-------DDV 347
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 348 AYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 136/300 (45%), Gaps = 4/300 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F+ ++ ++ + +A+ +R ++H F T +++ L K + +E
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+ G+ + + +M + + +L + A+ + + T++ ++K+G L
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
E M GVQ D+ +Y+ LIN CKE K++ A L DEM G + T T LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
DG CK G + A + M +L YN ++ L K G + A ++ + M +K
Sbjct: 249 DGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D TY++++ CK L +A + +K +R+ A A++ GL G +A+K+
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 39/238 (16%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ Y + D G+ + N M+ +G+ PDV TY+ LI G + S + + +L DEML+ G
Sbjct: 177 LMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNG 236
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ P+ ++ +L+ HC + G+ D A +++ M+ L+P T+N ++ GLCK
Sbjct: 237 LVPNGVTFTTLIDGHC--KNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQ 294
Query: 120 ALRMFRGLQKHGFVPELVTYNIL-----------------------------------IK 144
A + + G P+ +TY L I
Sbjct: 295 AQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALIS 354
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
GLC+ GR A +L+E+ G P TYT I+ + G ++L M+R GY
Sbjct: 355 GLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 153/285 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV+YN+L+ G R L L ML
Sbjct: 147 ILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 206
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN +F +M+ L P + TF +++G CKN D A
Sbjct: 207 GVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLA 266
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + P+L+TYN LI GLCK G L+ A ++ E+ G P+ ITYTT++
Sbjct: 267 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDG 326
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C ++ E M ++ D Y +I+ + G+ +A + +M++ G++ D
Sbjct: 327 CCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPD 386
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y +IN +CK+G + LL EM++ G T+ +L++G
Sbjct: 387 ARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 158/309 (51%), Gaps = 2/309 (0%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ ++ + + + D + + G+ P V SYN+
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNT 182
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M+ + P T+++++NGLCK D+A +F + G
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKG 242
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP VT+ LI G CK GR+ A I K++ +P+ ITY T++ + K
Sbjct: 243 LVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAH 302
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
++ M KG D Y T+I K G L A ++ ++M+ + +LD V Y LI+
Sbjct: 303 HLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGL 362
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 310
C+EG+ A +L EM G + D T+T++I+ CK G++ KG++L L+ M + G +
Sbjct: 363 CREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKL-LKEMQRDGHVPS 421
Query: 311 LEAYNCIVD 319
+ YN +++
Sbjct: 422 VVTYNVLMN 430
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 146/298 (48%), Gaps = 1/298 (0%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E+LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ + G P++ TY++LI GLCK ++ A + E+ G PN++T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTF 250
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A +++M
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSM 310
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CK+G L+ A+ M ++ D +T LI GLC+ G
Sbjct: 311 KGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVD 370
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
A L M +G + Y I++ K G + + + M+ +D S + +N+
Sbjct: 371 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ-RDGHVPSVVTYNV 427
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 130/272 (47%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y + + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWG 172
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ ++Y T+M R G + SAM G D + Y +I K ++ +A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDAN 232
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ + V++ TLI+ +CK G+++ A + +M Q D T+ LI GL
Sbjct: 233 ELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 292
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K A ++ M+ G + Y ++D KDG +D A + M + D
Sbjct: 293 CKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDD 352
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ + A K+L L G++
Sbjct: 353 VVYTALISGLCREGQSVDAEKMLREMLSVGLK 384
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 138/300 (46%), Gaps = 4/300 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F+ ++ ++ + +A+ +R ++H F T +++ L K + +E+
Sbjct: 75 FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 134
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+ G+ + + +M ++ ++ + A+ + G Y T++ ++++G L
Sbjct: 135 ECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 194
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
E M+ GVQ D+ +Y+ LIN CKE K++ A L DEM +G + T T LI
Sbjct: 195 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLI 254
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
DG CK G + A + M +L YN ++ L K G + A ++ + M +K
Sbjct: 255 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLK 314
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D TY++++ CK L +A + ++ R+ A++ GL G +A+K+
Sbjct: 315 PDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKM 374
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 174/360 (48%), Gaps = 4/360 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+A C+ + G IL+ M E G+ P V TYN+LI G + ++ + ++LD M
Sbjct: 114 VMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSN 173
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+ +YN L+ + A + M+ LTP T+N +++G CK Y D+A
Sbjct: 174 SCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSA 233
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+ + ++G VP+ TY++ I LCK GR+ A + L + G N + YT ++
Sbjct: 234 YRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDG 293
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K +L M + + Y +I K +++EA ME M+ G++
Sbjct: 294 YCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCT 353
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +Y LI KEG + A+ +LD+M G++ D Y +T I C GNIK A +
Sbjct: 354 VPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMS 413
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV----FESMEVKDSFTYSSMVHNLCKAK 356
M + G + Y ++D G G ++ A +V F++ TYS ++ +L K +
Sbjct: 414 MMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEE 473
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 119/425 (28%), Positives = 193/425 (45%), Gaps = 37/425 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ +A IL+ M +P+ TYN LI G R + ++ LL +MLE
Sbjct: 150 LIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESR 209
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P V +YNSL+H ++G D A R+ M + P T+++ ++ LCK + A
Sbjct: 210 LTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEAN 269
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F L++ G V Y LI G CKAG++ A +L + PN+ TY ++
Sbjct: 270 VLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGL 329
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ RK + L ++ +M +KG Y +I A +K G A ++QMV+ G Q D+
Sbjct: 330 CKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDV 389
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
Y I+ +C G ++ A ++ M ++G D T+T++ID G + A L+
Sbjct: 390 YIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKR 449
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDG-----------------------------KIDHAIN 332
M G D + Y+C++ L K+ K + A+
Sbjct: 450 MFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALE 509
Query: 333 VFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
+FE M + TY+ ++ LCK RL A KL + GV S +A+ + L
Sbjct: 510 LFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGV----SPSEAIYNSLL 565
Query: 389 HSGCR 393
+ C
Sbjct: 566 NCCCE 570
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 194/413 (46%), Gaps = 13/413 (3%)
Query: 2 LIDAYCQFVSF---------DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 52
+++ YC+ + ++ +++ N M + G + V+Y +LI G + ++
Sbjct: 1 MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 112
+ +M E P V +Y ++H LF+ G+ EA +F +M P T+ +M+N +C
Sbjct: 61 IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120
Query: 113 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
K + R+ + + G VP + TYN LI G CK G + A+ IL + + PN
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
TY ++ R + + +LS M T Y ++I KIG L A + M
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
+GV D +Y+ I+ CK+G++E A +L + ++++G + ++ +T LIDG CKAG +
Sbjct: 241 NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKM 300
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 348
A L+ M N YN ++D L K+ K+ A+ + ESM K TY+ +
Sbjct: 301 DDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTIL 360
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
+ + K A ++L + SG + A + G +EA+ + S
Sbjct: 361 IVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMS 413
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 168/337 (49%), Gaps = 4/337 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
+ + MRE G P++ TY +I + + L +LDEM+E G+ P V +YN+L+
Sbjct: 95 NLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGY 154
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ G + A + M P T+N ++ G C+ + A+ + + + P +
Sbjct: 155 CKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSV 214
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
VTYN LI G CK G L +A +L + ++G P+ TY+ + + + + + ++
Sbjct: 215 VTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNS 274
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
+K KG + Y +I + K G++ +A +++M+T+ + +YN LI+ CKE K
Sbjct: 275 LKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERK 334
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
++ A LL++ M ++G +C T+TILI + K G+ A L+ M G+ ++ Y
Sbjct: 335 VQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTA 394
Query: 317 IVDRLGKDGKIDHAIN----VFESMEVKDSFTYSSMV 349
+ G I A + +FE + D+ TY+ ++
Sbjct: 395 FIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVI 431
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 146/310 (47%), Gaps = 13/310 (4%)
Query: 107 MLNGLCK---------NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 157
M+NG CK N ++A +F + K G V+Y LI GLC+ GR+
Sbjct: 1 MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60
Query: 158 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 217
I K++ + P TYT I+ F + + + + S M+ +G + Y +I A
Sbjct: 61 IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 277
K +L+E +++MV G+ + +YN LI+ YCKEG +EAA +LD M ++
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180
Query: 278 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
T+ LI G C+ N+ A L M + ++ YN ++ K G +D A + M
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240
Query: 338 E----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 393
V D +TYS + LCK R+ A+ L S + G++ + A++DG +G
Sbjct: 241 NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKM 300
Query: 394 REAKKIQSKI 403
+A + ++
Sbjct: 301 DDANSLLDRM 310
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 157/368 (42%), Gaps = 29/368 (7%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ D ++L+RM P+ TYN+LI G + + +L L++ M++ G
Sbjct: 290 LIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKG 349
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ V +Y L+ + + G D A+R+ M+ P + ++ C A
Sbjct: 350 LKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAE 409
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + + G +P+ +TY ++I G L A +LK + D+G P+ TY+ ++K
Sbjct: 410 DMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHL 469
Query: 182 FRNR-----------------------------KYKLGLEILSAMKRKGYTFDGFGYCTV 212
+ K++ LE+ M G + + Y +
Sbjct: 470 LKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKL 529
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I K+GRL A + M GV YN+L+N C+ G A L+ M + G
Sbjct: 530 IIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGH 589
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
+ +L GL + G+ + A++ + + G++ + A+ ++D L K+G D
Sbjct: 590 LPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSE 649
Query: 333 VFESMEVK 340
+ ME +
Sbjct: 650 LLGVMEAR 657
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 131/315 (41%), Gaps = 29/315 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI A + FD + IL++M +G PDV Y + I + + D++ M E
Sbjct: 359 ILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFER 418
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT--- 117
G+ PD +Y ++ LG + A V + M P T++ ++ L K T
Sbjct: 419 GVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKY 478
Query: 118 --------------------------DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
+ AL +F + +HG P + TY LI GLCK GR
Sbjct: 479 KNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGR 538
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
L A+ + + + G +P+ Y +++ CC Y + ++ AM G+
Sbjct: 539 LGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNV 598
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+ + G ++A ++ G D V++ LI+ K G + LL ME +G
Sbjct: 599 LFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARG 658
Query: 272 FECDKYTHTILIDGL 286
+ T+ +LI+GL
Sbjct: 659 CQIHPQTYRMLIEGL 673
>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
Length = 671
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 199/401 (49%), Gaps = 39/401 (9%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
I A+CQ D +L +M + G +PDV+ Y++L+ G + + + +L LL+ ML
Sbjct: 258 IRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---C 314
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P+ YN+ + L G+ +E + +M+ D P ATF+ ++N LC+NR + A+
Sbjct: 315 RPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVE 374
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ +QK+G++P++V+YN +I R A +LK + P+ I++ ++KC
Sbjct: 375 VLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSM---LCKPDTISFNAVLKCLC 431
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ +++ +E+++ M +K + + +I + + G++K+A + E M DIV
Sbjct: 432 KAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIV 491
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQG------------------------------F 272
+Y++LIN + ++G E A+ L M +
Sbjct: 492 TYSSLINGFSEQGLDEMAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTE 551
Query: 273 EC--DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
+C ++ T ILI LC+ G + A E M K G ++ YN +++ + G++D A
Sbjct: 552 DCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDA 611
Query: 331 INVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
+ +M + D+ +Y+S++ LC+A+R A KL+ L+
Sbjct: 612 LKFLSTMPCEPDTISYNSILKGLCRAERWKDAEKLVTEMLR 652
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 186/397 (46%), Gaps = 40/397 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ YC+ S ++ R +G + +VVTY +LI G R+ L+ +L L+ M
Sbjct: 156 LVAGYCRDGSLGDAERVVEAARASGTA-NVVTYTALIDGYCRSGRLADALRLI---ASMP 211
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD ++YN+++ L + ++A + ++MI P TF + C+N D A+
Sbjct: 212 VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 271
Query: 122 RMFRGLQKHGFVPELVTYNILI--------------------------------KGLCKA 149
+ + K+G P+++ Y+ L+ KGLC A
Sbjct: 272 ELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALKGLCIA 331
Query: 150 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 209
GR ++ E+ PN T++T++ +NR + +E+L M++ GY D Y
Sbjct: 332 GRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSY 391
Query: 210 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
T+I+ F R +A ++ M+ + D +S+N ++ CK + A L+ +M K
Sbjct: 392 NTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLK 448
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 329
+ ++ T ILID LC+ G +K A E M K ++ Y+ +++ + G +
Sbjct: 449 KDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEM 508
Query: 330 AINVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLL 365
A ++F SM + D F+Y++ + LC A R A +L+
Sbjct: 509 AFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELI 545
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 183/376 (48%), Gaps = 9/376 (2%)
Query: 25 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 84
A P V++ N LI L+ + +L E L+ D S+N+L+ + G +
Sbjct: 110 APEPPAVISCNILIKKLCARRRLADAERVL-EALKASGAADAVSHNTLVAGYCRDGSLGD 168
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
A RV + T T+ +++G C++ +ALR+ + P+ TYN ++K
Sbjct: 169 AERVVEAARASG-TANVVTYTALIDGYCRSGRLADALRLIASMP---VAPDTYTYNTVLK 224
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
GLC A + A +++E+ + PN +T+ T ++ +N +E+L M + G T
Sbjct: 225 GLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTP 284
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D Y T++ F + GR+ EA + M+ + + V YN + C G+ E L+
Sbjct: 285 DVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELI 341
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
EM ++ + T + LI+ LC+ ++ A LE M K G+ ++ +YN I+
Sbjct: 342 AEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQ 401
Query: 325 GKIDHAINVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
+ D A+ + +SM K D+ ++++++ LCKAKR A +L+ LK RI + +
Sbjct: 402 ARADDALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNIL 461
Query: 384 VDGLRHSGCRREAKKI 399
+D L +G ++A ++
Sbjct: 462 IDSLCQNGQVKDAIEV 477
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 6/218 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID+ CQ + M + PD+VTY+SLI G + L + DL M
Sbjct: 460 ILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCR 519
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
D++SYN+ + L + D+A + DM+ D P TFNI+++ LC+ + A
Sbjct: 520 A---DIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRA 576
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++ + K+G P++ TYN LI G + GRL A LK L P+ I+Y +I+K
Sbjct: 577 IDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDA---LKFLSTMPCEPDTISYNSILKG 633
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 218
R ++K ++++ M RK T + + F+K
Sbjct: 634 LCRAERWKDAEKLVTEMLRKNCTPNEVTFKYANQLFIK 671
>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Brachypodium distachyon]
Length = 597
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 193/413 (46%), Gaps = 10/413 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM--LE 59
L+DA Q + MR+A + P+VVTY L+ G + + +L +LD M E
Sbjct: 143 LLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSVLDGMSGPE 202
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYT 117
+ PDV N+++ L + G+ +A + ++ + P T T+N + + C+
Sbjct: 203 SDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNV 262
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP--NAITYT 175
A + ++K P VT N ++ GLC GR+ A +E NA+TY+
Sbjct: 263 GMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYS 322
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T++ + +E+ M +G + D Y T+I+ + GRL +A M
Sbjct: 323 TLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKA 382
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G QLD +YN LI +C+ +L AY LL EM++ G + D YT+ L+ GLCKAG+
Sbjct: 383 GFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAV 442
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 351
L M G ++ + ++ K G+ID A+ +F SM+ ++ Y++++
Sbjct: 443 DELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDF 502
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
LCK++ A +L + V + A++ GLR +A ++ +R
Sbjct: 503 LCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMR 555
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 155/332 (46%), Gaps = 10/332 (3%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 112
L D + PPD ++N+L+ L Q G ++F M + P T+ I++ GLC
Sbjct: 124 LRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLC 183
Query: 113 KNRYTDNALRMFRGLQ--KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH--A 168
K +AL + G+ + P++V N ++ GLCK GRL+ A ++E S H A
Sbjct: 184 KAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCA 243
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
PN +TY + R + E+++ M+++ T + T++ +GR+ A ++
Sbjct: 244 PNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEF 303
Query: 229 MEQ--MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ V + + V+Y+TL+ + + A L EM +G D + +I GL
Sbjct: 304 FREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGL 363
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDS 342
+AG + A M K GF + +AYN ++ + +++ A + M+ D
Sbjct: 364 TQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDV 423
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
+TY++++ LCKA + +LL + G R
Sbjct: 424 YTYNTLLSGLCKAGDFLAVDELLGKMIDGGCR 455
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 104/233 (44%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I Q D +++ M++AG D YN LI G R L+ + +LL EM E G
Sbjct: 359 MISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAG 418
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV++YN+L+ L + G + + MI G P TF +++G CK D AL
Sbjct: 419 LQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEAL 478
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+FR + + G P V YN LI LCK+ A + E+ + N T+ ++K
Sbjct: 479 RIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGL 538
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
+ E++ M+ T D ++ IG +M+ T
Sbjct: 539 RDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIGETDRLKHFMQHDTT 591
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 98/179 (54%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C+ + Y +L M+EAG+ PDV TYN+L++G + +LL +M++
Sbjct: 393 ILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDG 452
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P V ++ +L+H ++G+ DEA R+F+ M + P T +N +++ LCK+R T A
Sbjct: 453 GCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLA 512
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+ +F +++ + T+N L+KGL A ++ + + P+ +T +M+
Sbjct: 513 IELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILME 571
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI YC+ D I M E+GI P+ V YN+LI ++ S +++L DEM E
Sbjct: 464 LIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKH 523
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+P +V ++N+L+ L P++A + M G TP T +I++ L TD
Sbjct: 524 VPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIGETDR-- 581
Query: 122 RMFRGLQKHGFVPELVT 138
+ +H P+ +T
Sbjct: 582 --LKHFMQHDTTPKRMT 596
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 169/357 (47%), Gaps = 4/357 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D Y I+ RM + G PDVVTY LI L ++ L +M PD +Y +L
Sbjct: 281 DEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTL 340
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ G D+ +++ +M P TF I++N LCK + A + ++K G
Sbjct: 341 LDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGV 400
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+P L TYN LI GL +A RL A + + G P A TY ++ ++ LE
Sbjct: 401 LPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALE 460
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
MK +G + + + ++GRL EA ++ + G+ D V+YN ++ Y
Sbjct: 461 TFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYS 520
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K G+++ A LL EM K E D LID L KAG ++ A M ++ +
Sbjct: 521 KVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVV 580
Query: 313 AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
YN ++ LGK+G+I A+ +FESM ++ T+++++ LCK + A K+
Sbjct: 581 TYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMF 637
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 153/324 (47%), Gaps = 4/324 (1%)
Query: 54 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 113
L++M E G + +SYN L+H L Q G EA V++ M+ L P TF+ ++ K
Sbjct: 182 LEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGK 241
Query: 114 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
R + + ++ G P + TY I I+ L + G++ A I+K + D G P+ +T
Sbjct: 242 RRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVT 301
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
YT ++ RK + + + MK + D Y T++ F G L + +M
Sbjct: 302 YTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEME 361
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
DG D+V++ L+N CK G++ A+ LLD M KQG + +T+ LI GL +A +
Sbjct: 362 ADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLD 421
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 349
A M +G + Y ++D GK G A+ FE M+ + + ++ +
Sbjct: 422 DALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASL 481
Query: 350 HNLCKAKRLPSASKLLLSCLKSGV 373
++L + RL A + SG+
Sbjct: 482 YSLAEMGRLGEAKAMFNELKSSGL 505
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 170/364 (46%), Gaps = 39/364 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D + D I M G +PDVVT+ L+ + ++ + DLLD M + G
Sbjct: 340 LLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQG 399
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++ +YN+L+ L + + D+A +F +M + P T+ ++++ K+ + AL
Sbjct: 400 VLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKAL 459
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F ++ G P +V N + L + GRL A+ + EL SG AP+++TY +MKC
Sbjct: 460 ETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKC- 518
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K+G++ EA + +M + D+
Sbjct: 519 ----------------------------------YSKVGQVDEAIKLLSEMSKVQCEPDV 544
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ N+LI+ K G++E A+ + ME+ T+ IL+ GL K G I+ A E
Sbjct: 545 IVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFES 604
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
MN G N +N ++D L K+ ++D A+ +F M D T+++++H K +
Sbjct: 605 MNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQ 664
Query: 358 LPSA 361
+ +A
Sbjct: 665 IKNA 668
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 159/339 (46%), Gaps = 35/339 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID + + + + + + M+ AG +PD TYNSLI ++ ++ DL DEML
Sbjct: 795 LLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTR 854
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ +YN ++ L + + D+A ++ +++ GD +P TF +++GL K+ D+A
Sbjct: 855 GCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDA 914
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
MF G+ +G P YNIL+ G K G + TA K + G P+ +YT +
Sbjct: 915 HEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTIL--- 971
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++IL C GR+ +A Y E++ G+ D
Sbjct: 972 ----------VDIL---------------CIA-------GRVDDALHYFEKLKQAGLDPD 999
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YN +IN + + E A L EM+ +G D YT+ LI L G I+ A E
Sbjct: 1000 LVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYE 1059
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
+ IG N+ YN ++ G + A +++ M V
Sbjct: 1060 ELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMV 1098
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 172/386 (44%), Gaps = 39/386 (10%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ RM G+ P + T+++L+ + + + + LL+EM MG+ P++++Y + L
Sbjct: 216 VYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLG 275
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ GK DEA R+ + M P T+ ++++ LC R D+A+ +F ++ P+ V
Sbjct: 276 RDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKV 335
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY L+ G L I E+ G+AP+ +T+T +
Sbjct: 336 TYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTIL-------------------- 375
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ A K GR+ EA D ++ M GV ++ +YNTLI+ + +L
Sbjct: 376 ---------------VNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRL 420
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A L ME G E YT+ +LID K+G+ A E M G N+ A N
Sbjct: 421 DDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNAS 480
Query: 318 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ L + G++ A +F ++ DS TY+ M+ K ++ A KLL K
Sbjct: 481 LYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQC 540
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKI 399
+++D L +G EA ++
Sbjct: 541 EPDVIVINSLIDTLYKAGRVEEAWQM 566
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 169/347 (48%), Gaps = 7/347 (2%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ N ++ +G++PD VTYN ++ ++ + ++ LL EM ++ PDV NSL+ L+
Sbjct: 496 MFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLY 555
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G+ +EA ++F M +L P T+NI+L GL K A+++F + HG P +
Sbjct: 556 KAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTI 615
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T+N L+ LCK + A + ++ P+ +T+ TI+ + + K + + M
Sbjct: 616 TFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM 675
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGK 256
K K D CT++ +K G++++A E G +D + ++ E
Sbjct: 676 K-KLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAG 734
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLEYMNKIGFDSNLEAYN 315
E A L + + + D +I LCK AR + +++ ++G L+ YN
Sbjct: 735 TEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYN 794
Query: 316 CIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRL 358
++D + ++ A N+FE M+ D+FTY+S++ K+ ++
Sbjct: 795 LLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKI 841
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 142/280 (50%), Gaps = 2/280 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LIDA+ + + + + + M G P+ +TYN +I+ +++ L ++DL ++
Sbjct: 831 LIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGD 890
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P ++ L+ L + G+ D+A+ +F M+ P +A +NI++NG K + D A
Sbjct: 891 FSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTAC 950
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F+ + K G P+L +Y IL+ LC AGR+ A ++L +G P+ + Y ++
Sbjct: 951 EFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGL 1010
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+++ + L + M+ +G D + Y ++I +G ++EA E++ G++ ++
Sbjct: 1011 GRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNV 1070
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
+YN LI Y G E AY + +M G CD T T
Sbjct: 1071 FTYNALIRGYTLSGNSELAYGIYKKMMVGG--CDPNTGTF 1108
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 142/305 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++A C+ + + +L+ MR+ G+ P++ TYN+LI+G R + L +LDL M +
Sbjct: 374 ILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESL 433
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P ++Y L+ + G P +A F+ M + P N L L + A
Sbjct: 434 GVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEA 493
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
MF L+ G P+ VTYN+++K K G++ A +L E+ P+ I +++
Sbjct: 494 KAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDT 553
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ + + ++ M+ Y ++A K G++++A E M G +
Sbjct: 554 LYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPN 613
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++NTL++ CK +++ A + +M D T +I G K IK A
Sbjct: 614 TITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFH 673
Query: 301 YMNKI 305
M K+
Sbjct: 674 QMKKL 678
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 154/349 (44%), Gaps = 39/349 (11%)
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
E+G+ P + YN L+ ++ + A +F++M P T T+N +++ K+ +
Sbjct: 783 ELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKIN 842
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
++ + G P +TYN++I L K+ RL A + L +P T+
Sbjct: 843 ELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTF---- 898
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
G DG +K GRL +A + + MV G +
Sbjct: 899 ----------------------GPLIDG---------LLKSGRLDDAHEMFDGMVHYGCR 927
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+ YN L+N Y K G ++ A M K+G D ++TIL+D LC AG + A +
Sbjct: 928 PNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHY 987
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 354
E + + G D +L AYN +++ LG+ + + A+++F M+ V D +TY+S++ NL
Sbjct: 988 FEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGI 1047
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ A K+ G++ A++ G SG A I K+
Sbjct: 1048 VGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKM 1096
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 153/340 (45%), Gaps = 9/340 (2%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL---TPCTATFNIMLNGL 111
+E++ G P S + ++ L + P A F+ + G+L T T N ML L
Sbjct: 77 EELVVNGKPRKGSSSDEVLGVLHSISDPIHALFYFKSV--GELPNVVHTTETCNHMLEIL 134
Query: 112 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 171
+R ++ +F +Q+ + TY I+ K L G LR A L+++ ++G NA
Sbjct: 135 RVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNA 194
Query: 172 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 231
+Y ++ ++ K LE+ M +G + ++ A K +K +E+
Sbjct: 195 YSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEE 254
Query: 232 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
M + G++ +I +Y I + ++GK++ AY ++ M+ G D T+T+LID LC A
Sbjct: 255 MESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARK 314
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSS 347
+ A M + Y ++D+ G +D ++ ME D T++
Sbjct: 315 LDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTI 374
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+V+ LCKA R+ A LL + K GV ++ GL
Sbjct: 375 LVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGL 414
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 35/211 (16%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID + D + + + M G P+ YN L+ G + + + + M++ G
Sbjct: 901 LIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEG 960
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+ SY L+ L G+ D+A F+ + L P +N+M+NGL +++ T+ AL
Sbjct: 961 IRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEAL 1020
Query: 122 RMFRGLQKHGFVPEL-----------------------------------VTYNILIKGL 146
+F +Q G VP+L TYN LI+G
Sbjct: 1021 SLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGY 1080
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTI 177
+G A I K++ G PN T+ +
Sbjct: 1081 TLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 73/139 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C D ++++AG+ PD+V YN +I G R+ +L L EM
Sbjct: 970 ILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNR 1029
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD+++YNSL+ L +G +EA ++++++ L P T+N ++ G + ++ A
Sbjct: 1030 GIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELA 1089
Query: 121 LRMFRGLQKHGFVPELVTY 139
+++ + G P T+
Sbjct: 1090 YGIYKKMMVGGCDPNTGTF 1108
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 4/200 (2%)
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y + + G L++A +E+M G L+ SYN LI+ + G + A + M
Sbjct: 162 YLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMV 221
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
+G + T + L+ K NIK LE M +G N+ Y + LG+DGKID
Sbjct: 222 SEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKID 281
Query: 329 HAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 384
A + + M+ D TY+ ++ LC A++L A L S + K ++
Sbjct: 282 EAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLL 341
Query: 385 DGLRHSGCRREAKKIQSKIR 404
D G + +KI +++
Sbjct: 342 DKFSDCGHLDKVEKIWTEME 361
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 191/389 (49%), Gaps = 4/389 (1%)
Query: 20 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 79
+M GIS D+ ++ LI R S LS +L +L +M+++G P + ++ SL+H +
Sbjct: 95 QKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
+ +A + M+ P +N +++GLCKN + AL + ++K G ++VTY
Sbjct: 155 NRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
N L+ GLC +GR A +L+++ P+ +T+T ++ + E+ M +
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
+ Y ++I GRL +A + M + G ++V+YNTLI+ +CK ++
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
L M +GF D +T+ LI G C+ G ++ A +M ++ + ++
Sbjct: 335 GMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394
Query: 320 RLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
L +G+I+ A+ F+ M + + Y+ M+H LCKA ++ A +L GV+
Sbjct: 395 GLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKP 454
Query: 376 LKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++ GL +G RREA ++ +++
Sbjct: 455 DARTYTIMILGLCKNGPRREADELIRRMK 483
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 192/400 (48%), Gaps = 8/400 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C+ ++L +M + G P +VT+ SL+ G + + + L+ M++
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V YN+L+ L + G+ + A + +M L T+N +L GLC + +A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK- 179
RM R + K P++VT+ LI K G L A+ + KE+ S PN +TY +I+
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
C R Y + M KG + Y T+I+ F K + E ++M +G
Sbjct: 291 LCMHGRLYD-AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DI +YNTLI+ YC+ GKL A + M + D TH IL+ GLC G I+ A +
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF 409
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ M + + AYN ++ L K K++ A +F + V+ D+ TY+ M+ LCK
Sbjct: 410 DDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN 469
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
A +L+ + G+ +A+ ++ HS +E
Sbjct: 470 GPRREADELIRRMKEEGIICQMNAEDDHLE--EHSSSNKE 507
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 4/258 (1%)
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
G + R A + E+ S P+ + +T ++ R+Y+ + M+ G +
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D + + +I F + RL A + +M+ G + IV++ +L++ +C ++ A+ L+
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
M K G+E + + LIDGLCK G + A L M K G +++ YN ++ L
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
G+ A + M + D T+++++ K L A +L ++S V
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 381 KAVVDGLRHSGCRREAKK 398
++++GL G +AKK
Sbjct: 285 NSIINGLCMHGRLYDAKK 302
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 194/411 (47%), Gaps = 10/411 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D + F + + E+ P Y I A + S + L+L + M
Sbjct: 149 LLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHD 208
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P V+ YN L+ L + + ++A ++F +M+ L P T+N +++G CK + +
Sbjct: 209 RIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKS 268
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ ++ P L+T+N L+KGL KAG + A +LKE+ D G P+A T++ +
Sbjct: 269 FKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDG 328
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
N K + L + G + + ++ A K G++++A + + + + G+ +
Sbjct: 329 YSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPN 388
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V YNT+I+ YC++G L A + ++ MEKQG + D + LI C+ G ++ A +
Sbjct: 389 EVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVN 448
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M G ++E YN ++ G+ + D ++ + ME + + +Y ++++ LCK
Sbjct: 449 KMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGS 508
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
+L A + GV ++DG G KI+ R +K
Sbjct: 509 KLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKG------KIEDAFRFSK 553
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 185/428 (43%), Gaps = 39/428 (9%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
I A + G + NRM+ I P V YN LI G + ++ + L DEML +
Sbjct: 186 IQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRL 245
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P + +YN+L+ + G P+++ +V + M + P TFN +L GL K ++A
Sbjct: 246 LPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAEN 305
Query: 123 MFRGLQKHGFVPELVTYNILIKG-----------------------------------LC 147
+ + ++ GFVP+ T++IL G LC
Sbjct: 306 VLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALC 365
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K G++ A IL G PN + Y T++ R + AM+++G D
Sbjct: 366 KEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHL 425
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y +I F ++G ++ A + +M GV + +YN LI Y ++ + + + +L EM
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM 485
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
E G + ++ LI+ LCK + A++ M G + YN ++D GKI
Sbjct: 486 EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKI 545
Query: 328 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
+ A + M K + TY++++ L +L A LLL + G++ ++
Sbjct: 546 EDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSL 605
Query: 384 VDGLRHSG 391
+ G +G
Sbjct: 606 ISGYGFAG 613
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 154/319 (48%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
+R GI P + L+ + ++++ +LE P + Y + +L
Sbjct: 135 LRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSD 194
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
+ +F M + P +N++++GLCK + ++A ++F + +P L+TYN
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
LI G CKAG + + + + P+ IT+ T++K F+ + +L MK G
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ D F + + + + + A E V GV+++ + + L+N CKEGK+E A
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+L +G ++ + +IDG C+ G++ GAR+ +E M K G + AYNC++ R
Sbjct: 375 EILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF 434
Query: 322 GKDGKIDHAINVFESMEVK 340
+ G++++A M++K
Sbjct: 435 CELGEMENAEKEVNKMKLK 453
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 172/362 (47%), Gaps = 8/362 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++A C+ + IL R G+ P+ V YN++I G R L + ++ M +
Sbjct: 359 ILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQ 418
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD +YN L+ +LG+ + A + M ++P T+NI++ G + D
Sbjct: 419 GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 478
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + ++ +G +P +V+Y LI LCK +L A+ + +++ D G +P Y ++
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C K + M +KG + Y T+I G+L EA D + ++ G++ D
Sbjct: 539 CCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +YN+LI+ Y G ++ L +EM++ G + T+ +LI LC +G L
Sbjct: 599 VFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTK---EGIELTER 654
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
++ +L YN ++ G ++ A N+ + M K D TY+S++ K
Sbjct: 655 LFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVG 714
Query: 357 RL 358
+L
Sbjct: 715 KL 716
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 178/402 (44%), Gaps = 38/402 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ + + + + RM+ I P ++T+N+L+ G + ++ + ++L EM ++G
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 62 IPPDVWSYNSL-----------------------------------MHCLFQLGKPDEAN 86
PD ++++ L ++ L + GK ++A
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ + L P +N M++G C+ A ++K G P+ + YN LI+
Sbjct: 375 EILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF 434
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C+ G + A + ++ G +P+ TY ++ R ++ +IL M+ G +
Sbjct: 435 CELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNV 494
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T+I K +L EA M GV + YN LI+ C +GK+E A+ E
Sbjct: 495 VSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKE 554
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M K+G E + T+ LIDGL G + A L +++ G ++ YN ++ G G
Sbjct: 555 MLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGN 614
Query: 327 IDHAINVFESME---VKDSFTYSSMVHNLCKAKRLPSASKLL 365
+ I ++E M+ +K + ++ +LC + + +L
Sbjct: 615 VQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLF 656
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 167/367 (45%), Gaps = 31/367 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ + +N+M+ G+SP V TYN LI G R D+L EM + G
Sbjct: 430 LIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V SY +L++CL + K EA V +DM ++P +N++++G C ++A
Sbjct: 490 TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAF 549
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R + + K G LVTYN LI GL G+L A +L E+ G P+ TY +++
Sbjct: 550 RFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGY 609
Query: 182 FRNRKYKLGLEILSAMKRKGY--------------TFDG-------FG----------YC 210
+ + + MKR G T +G FG Y
Sbjct: 610 GFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYN 669
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
V+ + G +++A + +QM+ + LD +YN+LI K GKL L+DEM +
Sbjct: 670 GVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAR 729
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
E + T+ I++ G C+ + A + M + GF ++ N +V L ++ + A
Sbjct: 730 EMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEA 789
Query: 331 INVFESM 337
V M
Sbjct: 790 EIVISEM 796
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 163/394 (41%), Gaps = 37/394 (9%)
Query: 31 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP--DVWSYNSL--MHCLFQLGKPDEAN 86
V + ++ + L S S D E PP V L + L Q + + A
Sbjct: 16 TVKFTDSVSACSCRRLFSASTDPEPESQPEQAPPTNPVTGDEKLRNLRVLLQQNRIETAR 75
Query: 87 RVFQDMICGDLTPCTAT----------------------FNIMLNGLCKNRYTDNALRMF 124
V ++ D TP + +++LN +++ A +F
Sbjct: 76 GVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLN---ESKMISEAADLF 132
Query: 125 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
L+ G P + +L+ L K + R + + +S P+ Y ++ +
Sbjct: 133 FALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKL 192
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
GLE+ + MK F Y +I K R+ +A ++M+ + +++Y
Sbjct: 193 SDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITY 252
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
NTLI+ YCK G E ++ + + M+ E T L+ GL KAG ++ A L+ M
Sbjct: 253 NTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKD 312
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVK-DSFTYSSMVHNLCKAKRLPS 360
+GF + ++ + D + K + A+ V+E+ VK +++T S +++ LCK ++
Sbjct: 313 LGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEK 372
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
A ++L + G+ + ++DG CR+
Sbjct: 373 AEEILGREMAKGLVPNEVIYNTMIDGY----CRK 402
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 192/391 (49%), Gaps = 16/391 (4%)
Query: 34 YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
+NSL+ R L S+ + M G+ P V ++NSL+ L + G+ + A +V+ +M+
Sbjct: 152 FNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEML 211
Query: 94 CG-DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
+TP T TFNI++ G C N D+ R+F L + G P++VTYN L+ GLC+AG++
Sbjct: 212 STYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKV 271
Query: 153 RTARWILKELGDSG--HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
A ++K +G PN +TYTT+++ R+ + L + M +G + Y
Sbjct: 272 TVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYN 331
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGV-QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
T+I + + ++ D +E DG D ++NTL++ +C G L+ A + + M +
Sbjct: 332 TLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSE 391
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYM--NKI-----GFDSNLEAYNCIVDRLG 322
+ D T++ L+ LC+ G+ + A L+ + KI G + AYN I L
Sbjct: 392 LKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLC 451
Query: 323 KDGKIDHAINVFESM---EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
+ GK A F + +D +Y +++ CK S +LL+ L+
Sbjct: 452 ETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFET 511
Query: 380 QKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
+++++GL H + +QS +M + SH
Sbjct: 512 YESLINGLLHMD--KPLLALQSLEKMLRSSH 540
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 173/360 (48%), Gaps = 14/360 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C D G+ I N + G PDVVTYN+L+ G R ++ + +++ M +
Sbjct: 225 ILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKK 284
Query: 61 GIP--PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
+ P+V +Y +L+ + ++A VF++M+ L T+N ++ GLC+ R +
Sbjct: 285 SVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFE 344
Query: 119 NALRMFRGLQKHG-FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
+ G G F P+ T+N L+ C AG L A + + + + P++ TY+ +
Sbjct: 345 KIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSAL 404
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI-------GRLKEATDYME 230
++ + Y+ ++L + + G G ++AA+ I G+ K+A
Sbjct: 405 VRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFR 464
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
Q++ G Q D SY TLI +CKEG E+ Y LL M ++ F D T+ LI+GL
Sbjct: 465 QLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHMD 523
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDSFTYSS 347
A LE M + N ++ I+ +L + G+ + ++ + M ++ + ++S+
Sbjct: 524 KPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRTSESASLIQLMLDKNIRQNLSFST 583
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 164/363 (45%), Gaps = 15/363 (4%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G++PD T+N LI G N ++ + +++ G PDV +YN+L+ L + GK A
Sbjct: 215 GVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVA 274
Query: 86 NRVFQDM--ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
V + M DL P T+ ++ G C R + AL +F + G +TYN LI
Sbjct: 275 YNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLI 334
Query: 144 KGLCKAGRLRTARWILK-ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
KGLC+A + + IL+ GD +P+ T+ T+M C L++ M
Sbjct: 335 KGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKI 394
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT-------DGVQLDIVSYNTLINLYCKEG 255
D Y ++ + + G ++A D +++++ DG + + +YN + C+ G
Sbjct: 395 QPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETG 454
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
K + A ++ ++G + D ++ LI G CK G + L M + F + E Y
Sbjct: 455 KTKKAEKAFRQLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYE 513
Query: 316 CIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
+++ L K A+ E M +S T+ S++ L + R ++ L+ L
Sbjct: 514 SLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRTSESASLIQLMLDK 573
Query: 372 GVR 374
+R
Sbjct: 574 NIR 576
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 150/342 (43%), Gaps = 14/342 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
LI C+ F+ IL G SPD T+N+L+ L +L + + M E+
Sbjct: 333 LIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSEL 392
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI------CGD-LTPCTATFNIMLNGLCK 113
I PD +Y++L+ L Q G ++A + ++ GD P A +N + LC+
Sbjct: 393 KIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCE 452
Query: 114 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
T A + FR L + G + +Y LI G CK G + +L + P+ T
Sbjct: 453 TGKTKKAEKAFRQLMRRG-TQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFET 511
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
Y +++ K L L+ L M R + + + +++A ++ GR E+ ++ M+
Sbjct: 512 YESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRTSESASLIQLML 571
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-I 292
++ ++ + L G + A+ L+ + +G+ LI LC I
Sbjct: 572 DKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKGYSVKMEE---LIRYLCHCRKVI 628
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
+G++L L + F +++ N ++ +L + K+ A +++
Sbjct: 629 QGSKLLLFSLESHQF-VDMDLCNTVIFQLCEINKLSEAFSLY 669
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 170/320 (53%), Gaps = 4/320 (1%)
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+A ++ +M TP T+N+++NG+C+ D+A+ + L +G P V+YNI++
Sbjct: 10 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 69
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
KGLC A R A ++ E+G G PN +T+ ++ R + LE+L + + G T
Sbjct: 70 KGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCT 129
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
+ Y ++ AF K ++ +A +++ MV+ G DIVSYNTL+ C+ G+++ A L
Sbjct: 130 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 189
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
L +++ +G ++ +IDGL KAG K A L M G ++ Y+ I L +
Sbjct: 190 LHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR 249
Query: 324 DGKIDHAINVF---ESMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
+ +I+ AI F + M ++ ++ Y++++ LCK + SA L + +G +S
Sbjct: 250 EDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNEST 309
Query: 380 QKAVVDGLRHSGCRREAKKI 399
+++GL + G +EA+ +
Sbjct: 310 YTILIEGLAYEGLIKEARDL 329
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 163/333 (48%)
Query: 5 AYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP 64
A C+ + +L+ MR+ G +PD+VTYN ++ G + + +++ L + G P
Sbjct: 1 ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 124
+ SYN ++ L + ++A + +M P TFN++++ LC+ + AL +
Sbjct: 61 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 120
Query: 125 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
+ K+G P ++YN L+ CK ++ A L + G P+ ++Y T++ R+
Sbjct: 121 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 180
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
+ + +E+L +K KG Y TVI K G+ KEA + + +MV+ G+Q DI++Y
Sbjct: 181 GEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITY 240
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
+T+ C+E ++E A +++ G + + +I GLCK A YM
Sbjct: 241 STIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIG 300
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
G N Y +++ L +G I A ++ + +
Sbjct: 301 NGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 333
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 148/296 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++ CQ D L + G P+ V+YN ++ G + +L+ EM +
Sbjct: 32 VVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQK 91
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PP+V ++N L+ L + G + A V + + TP + ++N +L+ CK + D A
Sbjct: 92 GCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKA 151
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P++V+YN L+ LC++G + A +L +L D G AP I+Y T++
Sbjct: 152 MAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDG 211
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K K LE+L+ M KG D Y T+ A + R+++A ++ G++ +
Sbjct: 212 LTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPN 271
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
V YN +I CK + +A L M G ++ T+TILI+GL G IK AR
Sbjct: 272 TVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEAR 327
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 130/271 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ C ++ ++ M + G P+VVT+N LI+ R L+ +L++L+++ +
Sbjct: 67 IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKY 126
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ SYN L+H + K D+A M+ P ++N +L LC++ D A
Sbjct: 127 GCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 186
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + L+ G P L++YN +I GL KAG+ + A +L E+ G P+ ITY+TI
Sbjct: 187 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 246
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + + + ++ G + Y +I K A D M+ +G +
Sbjct: 247 LCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPN 306
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+Y LI EG ++ A LLDE+ +G
Sbjct: 307 ESTYTILIEGLAYEGLIKEARDLLDELCSRG 337
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 114/237 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLI C+ + +L ++ + G +P+ ++YN L+ + + ++ LD M+
Sbjct: 102 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 161
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ SYN+L+ L + G+ D A + + P ++N +++GL K T A
Sbjct: 162 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 221
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + G P+++TY+ + GLC+ R+ A ++ D G PN + Y I+
Sbjct: 222 LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILG 281
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ R+ +++ + M G + Y +I G +KEA D ++++ + GV
Sbjct: 282 LCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGV 338
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 182/368 (49%), Gaps = 7/368 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ A C + + + M PDVVTY ++ G S L ++ LL EM
Sbjct: 258 ILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAAR 314
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + +Y S++ L G+ +A RV +DM+ + A F +++G C+ A
Sbjct: 315 GLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAA 374
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
F +QK G + VTY LI GLC+AG L+ A +L+E+ D G +A+TYT ++
Sbjct: 375 RNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDG 434
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + + M +K T + Y + K G + A + + +M + G++L+
Sbjct: 435 YCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELN 494
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I +YN+LIN CK G LE A + +M++ G + D YT+T +I LC++ + A L+
Sbjct: 495 IFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQ 554
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G + YN +++ G+++ + E M K ++ TY+S++ C K
Sbjct: 555 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEK 614
Query: 357 RLPSASKL 364
+ S +++
Sbjct: 615 NMKSTTEI 622
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 189/392 (48%), Gaps = 21/392 (5%)
Query: 10 VSFD------AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP 63
VSFD +L R+R+ GISP + N+++ L ++ L E+ E
Sbjct: 199 VSFDLLLLCLPSAPLLLRLRQYGISPSPESCNAVLCRLP----LDEAVQLFQELPEK--- 251
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
+ SYN L+ L G+ +A+++F +M P T+ IM++G C + A+++
Sbjct: 252 -NTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKL 307
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
+ G V Y +I LC G++ A +++++ G +A +TT+M R
Sbjct: 308 LSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCR 367
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
M+++G DG Y +I + G LKEA +++M G+ +D V+
Sbjct: 368 KGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVT 427
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
Y LI+ YCK GK+ A+L+ ++M ++ + T+T L DGLCK G++ A L M
Sbjct: 428 YTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMC 487
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLP 359
G + N+ YN +++ L K G ++ A+ M+ D +TY++++ LC++K L
Sbjct: 488 SKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELD 547
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
A LL L G++ +++G SG
Sbjct: 548 RAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSG 579
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 194/413 (46%), Gaps = 4/413 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ YC + +L+ M G+ + V Y S+IA +S ++ ++++M+
Sbjct: 290 IMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMH 349
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ D + ++M + G A F +M L T+ ++NGLC+ A
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+ + ++ G + VTY +LI G CK G++ A + ++ PN +TYT +
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ E+L M KG + F Y ++I K G L++A M M G++ D
Sbjct: 470 LCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +Y T+I C+ +L+ A+ LL EM +G + T+ +L++G C +G ++G + LE
Sbjct: 530 VYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
+M + N YN ++ + + + +++ M V + TY+ ++ CKA+
Sbjct: 590 WMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKAR 649
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+ A ++ G R+ S+ A++ L EA+++ K+R +++
Sbjct: 650 NMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLT 702
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 164/351 (46%), Gaps = 1/351 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ +C+ A + M++ G++ D VTY +LI G R L + +L EM + G
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG 420
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D +Y L+ ++GK EA V M+ +TP T+ + +GLCK A
Sbjct: 421 LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAAN 480
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G + TYN LI GLCKAG L A + ++ ++G P+ TYTTI+
Sbjct: 481 ELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGAL 540
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++++ +L M KG Y ++ F GR++ +E M+ + +
Sbjct: 541 CQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNT 600
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN+L+ YC E +++ + M Q ++ T+ ILI G CKA N+K A
Sbjct: 601 TTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSE 660
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
M + GF +YN ++ L K K A +FE M K+ T V+N
Sbjct: 661 MIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMR-KERLTAEPDVYNF 710
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 141/284 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID YC+ + + N+M + ++P+VVTY +L G + + + +LL EM
Sbjct: 430 VLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSK 489
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ ++++YNSL++ L + G ++A R DM L P T+ ++ LC+++ D A
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + G P +VTYN+L+ G C +GR+ + +L+ + + PN TY ++MK
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K EI M + + Y +I K +KEA + +M+ G +L
Sbjct: 610 YCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLT 669
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
SYN LI L K+ K A L ++M K+ + + ID
Sbjct: 670 ASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYID 713
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 147/285 (51%), Gaps = 11/285 (3%)
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
D A+++F+ L + +YNIL+K LC AGR++ A + E+ P+ +TY +
Sbjct: 239 DEAVQLFQELPEKN----TCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIM 291
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + + +++LS M +G + Y +VIA G++ +A +E MV GV
Sbjct: 292 VHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGV 351
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
LD + T+++ +C++G L AA DEM+K+G D T+T LI+GLC+AG +K A
Sbjct: 352 VLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAER 411
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 353
L+ M G D + Y ++D K GK+ A V M K + TY+++ LC
Sbjct: 412 VLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLC 471
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
K + +A++LL G+ + ++++GL +G +A +
Sbjct: 472 KQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMR 516
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 123/266 (46%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L D C+ A +L+ M G+ ++ TYNSLI G + L ++ + +M E G
Sbjct: 466 LSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAG 525
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV++Y +++ L Q + D A+ + Q+M+ + P T+N+++NG C + +
Sbjct: 526 LKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGK 585
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + + P TYN L+K C +++ I K + PN TY ++K
Sbjct: 586 RLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGH 645
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R K L S M KG+ Y +I K + EA E+M + + +
Sbjct: 646 CKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEP 705
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEM 267
YN I+L E LE+ L DE+
Sbjct: 706 DVYNFYIDLSFNEDNLESTLALCDEL 731
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 182/368 (49%), Gaps = 7/368 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ A C + + + M PDVVTY ++ G S L ++ LL EM
Sbjct: 258 ILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAAR 314
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + +Y S++ L G+ +A RV +DM+ + A F +++G C+ A
Sbjct: 315 GLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAA 374
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
F +QK G + VTY LI GLC+AG L+ A +L+E+ D G +A+TYT ++
Sbjct: 375 RNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDG 434
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + + M +K T + Y + K G + A + + +M + G++L+
Sbjct: 435 YCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELN 494
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I +YN+LIN CK G LE A + +M++ G + D YT+T +I LC++ + A L+
Sbjct: 495 IFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQ 554
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G + YN +++ G+++ + E M K ++ TY+S++ C K
Sbjct: 555 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEK 614
Query: 357 RLPSASKL 364
+ S +++
Sbjct: 615 NMKSTTEI 622
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 189/392 (48%), Gaps = 21/392 (5%)
Query: 10 VSFD------AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP 63
VSFD +L R+R+ GISP + N+++ L ++ L E+ E
Sbjct: 199 VSFDLLLLCLPSAPLLLRLRQYGISPSPESCNAVLCRLP----LDEAVQLFQELPEK--- 251
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
+ SYN L+ L G+ +A+++F +M P T+ IM++G C + A+++
Sbjct: 252 -NTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKL 307
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
+ G V Y +I LC G++ A +++++ G +A +TT+M R
Sbjct: 308 LSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCR 367
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
M+++G DG Y +I + G LKEA +++M G+ +D V+
Sbjct: 368 KGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVT 427
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
Y LI+ YCK GK+ A+L+ ++M ++ + T+T L DGLCK G++ A L M
Sbjct: 428 YTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMC 487
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLP 359
G + N+ YN +++ L K G ++ A+ M+ D +TY++++ LC++K L
Sbjct: 488 SKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELD 547
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
A LL L G++ +++G SG
Sbjct: 548 RAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSG 579
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 194/413 (46%), Gaps = 4/413 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ YC + +L+ M G+ + V Y S+IA +S ++ ++++M+
Sbjct: 290 IMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMH 349
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ D + ++M + G A F +M L T+ ++NGLC+ A
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+ + ++ G + VTY +LI G CK G++ A + ++ PN +TYT +
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ E+L M KG + F Y ++I K G L++A M M G++ D
Sbjct: 470 LCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +Y T+I C+ +L+ A+ LL EM +G + T+ +L++G C +G ++G + LE
Sbjct: 530 VYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
+M + N YN ++ + + + +++ M V + TY+ ++ CKA+
Sbjct: 590 WMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKAR 649
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+ A ++ G R+ S+ A++ L EA+++ K+R +++
Sbjct: 650 NMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLT 702
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 164/351 (46%), Gaps = 1/351 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ +C+ A + M++ G++ D VTY +LI G R L + +L EM + G
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG 420
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D +Y L+ ++GK EA V M+ +TP T+ + +GLCK A
Sbjct: 421 LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAAN 480
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G + TYN LI GLCKAG L A + ++ ++G P+ TYTTI+
Sbjct: 481 ELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGAL 540
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++++ +L M KG Y ++ F GR++ +E M+ + +
Sbjct: 541 CQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNT 600
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN+L+ YC E +++ + M Q ++ T+ ILI G CKA N+K A
Sbjct: 601 TTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSE 660
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
M + GF +YN ++ L K K A +FE M KD T V+N
Sbjct: 661 MIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMR-KDRLTAEPDVYNF 710
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 140/284 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID YC+ + + N+M + ++P+VVTY +L G + + + +LL EM
Sbjct: 430 VLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSK 489
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ ++++YNSL++ L + G ++A R DM L P T+ ++ LC+++ D A
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + G P +VTYN+L+ G C +GR+ + +L+ + + PN TY ++MK
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K EI M + + Y +I K +KEA + +M+ G +L
Sbjct: 610 YCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLT 669
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
SYN LI L K+ K A L ++M K + + ID
Sbjct: 670 ASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYID 713
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 147/285 (51%), Gaps = 11/285 (3%)
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
D A+++F+ L + +YNIL+K LC AGR++ A + E+ P+ +TY +
Sbjct: 239 DEAVQLFQELPEKN----TCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIM 291
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + + +++LS M +G + Y +VIA G++ +A +E MV GV
Sbjct: 292 VHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGV 351
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
LD + T+++ +C++G L AA DEM+K+G D T+T LI+GLC+AG +K A
Sbjct: 352 VLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAER 411
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 353
L+ M G D + Y ++D K GK+ A V M K + TY+++ LC
Sbjct: 412 VLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLC 471
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
K + +A++LL G+ + ++++GL +G +A +
Sbjct: 472 KQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMR 516
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 123/266 (46%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L D C+ A +L+ M G+ ++ TYNSLI G + L ++ + +M E G
Sbjct: 466 LSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAG 525
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV++Y +++ L Q + D A+ + Q+M+ + P T+N+++NG C + +
Sbjct: 526 LKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGK 585
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + + P TYN L+K C +++ I K + PN TY ++K
Sbjct: 586 RLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGH 645
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R K L S M KG+ Y +I K + EA E+M D + +
Sbjct: 646 CKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEP 705
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEM 267
YN I+L E LE+ L DE+
Sbjct: 706 DVYNFYIDLSFNEDNLESTLALCDEL 731
>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
gi|223945505|gb|ACN26836.1| unknown [Zea mays]
Length = 462
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 199/401 (49%), Gaps = 39/401 (9%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
I A+CQ D +L +M + G +PDV+ Y++L+ G + + + +L LL+ ML
Sbjct: 49 IRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---C 105
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P+ YN+ + L G+ +E + +M+ D P ATF+ ++N LC+NR + A+
Sbjct: 106 RPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVE 165
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ +QK+G++P++V+YN +I R A +LK + P+ I++ ++KC
Sbjct: 166 VLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSM---LCKPDTISFNAVLKCLC 222
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ +++ +E+++ M +K + + +I + + G++K+A + E M DIV
Sbjct: 223 KAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIV 282
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQG------------------------------F 272
+Y++LIN + ++G E A+ L M +
Sbjct: 283 TYSSLINGFSEQGLDEMAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTE 342
Query: 273 EC--DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
+C ++ T ILI LC+ G + A E M K G ++ YN +++ + G++D A
Sbjct: 343 DCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDA 402
Query: 331 INVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
+ +M + D+ +Y+S++ LC+A+R A KL+ L+
Sbjct: 403 LKFLSTMPCEPDTISYNSILKGLCRAERWKDAEKLVTEMLR 443
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 157/339 (46%), Gaps = 36/339 (10%)
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
M + PD ++YN+++ L + ++A + ++MI P TF + C+N D
Sbjct: 1 MPVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDR 60
Query: 120 ALRMFRGLQKHGFVPELVTYNILI--------------------------------KGLC 147
A+ + + K+G P+++ Y+ L+ KGLC
Sbjct: 61 AVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALKGLC 120
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
AGR ++ E+ PN T++T++ +NR + +E+L M++ GY D
Sbjct: 121 IAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVV 180
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y T+I+ F R +A ++ M+ + D +S+N ++ CK + A L+ +M
Sbjct: 181 SYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKM 237
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
K+ ++ T ILID LC+ G +K A E M K ++ Y+ +++ + G
Sbjct: 238 LKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLD 297
Query: 328 DHAINVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLL 365
+ A ++F SM + D F+Y++ + LC A R A +L+
Sbjct: 298 EMAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELI 336
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 6/218 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID+ CQ + M + PD+VTY+SLI G + L + DL M
Sbjct: 251 ILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSM--- 307
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
D++SYN+ + L + D+A + DM+ D P TFNI+++ LC+ + A
Sbjct: 308 PCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRA 367
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++ + K+G P++ TYN LI G + GRL A LK L P+ I+Y +I+K
Sbjct: 368 IDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDA---LKFLSTMPCEPDTISYNSILKG 424
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 218
R ++K ++++ M RK T + + F+K
Sbjct: 425 LCRAERWKDAEKLVTEMLRKNCTPNEVTFKYANQLFIK 462
>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 418
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 141/284 (49%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E LE G P ++ +N LMH + G+ A VF + L P +FN ++NG K
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ +Q G P++ TY++LI GLCK ++ A + E+ D+G PN +T+
Sbjct: 185 GNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A D ++M
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG LE A+ M K+ D +T LI GLC+ G
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K G + + + M+
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 140/256 (54%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + + + G+ P VV++N+L+ G + L L + M G+ PDV++Y+ L++ L
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ K D+AN +F +M+ L P TF +++G CKN D A+ +++ + P+L
Sbjct: 217 CKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+TYN LI GLCK G L+ A+ + E+ G P+ ITYTT++ + + E
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKR 336
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M ++ D Y +I+ + GR +A + +M++ G++ +I +Y +IN +CK+G
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396
Query: 257 LEAAYLLLDEMEKQGF 272
+ LL EM++ G+
Sbjct: 397 VWTGSKLLKEMQRDGY 412
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 146/284 (51%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + G+ P V S+N+LM+ +LG D
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLD 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M + P T+++++NGLCK D+A +F + +G VP VT+ LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I K++ +P+ ITY T++ + K ++ M KG
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A +Y ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
L EM G + + T+T++I+ CK G++ L+ M + G+
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 124/271 (45%), Gaps = 31/271 (11%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
FNI+++ K A +F + K G P +V++N L+ G K G L + +
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQ 198
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
SG P+ TY+ ++ + K E+ M G +G + T+I K GR+
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A + +QM++ + D+++YNTLI CK+G L+ A L DEM +G + DK T+T LI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLI 318
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF 343
DG CK G+++ A EY ++ I I + D
Sbjct: 319 DGSCKEGHLETA---FEYRKRM---------------------IKENIRL-------DDV 347
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 348 AYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 137/300 (45%), Gaps = 4/300 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F+ ++ ++ + +A+ +R ++H F T +++ L K + +E
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+ G+ + + +M + + +L + A+ + G + T++ ++K+G L
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLD 188
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
E M GVQ D+ +Y+ LIN CKE K++ A L DEM G + T T LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
DG CK G + A + M +L YN ++ L K G + A ++ + M +K
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLK 308
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D TY++++ CK L +A + +K +R+ A A++ GL G +A+K+
Sbjct: 309 PDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ D + + M + G+ P+ VT+ +LI G +N + ++++ +ML
Sbjct: 211 VLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+ +YN+L++ L + G +A + +M L P T+ +++G CK + + A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETA 330
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K + V Y LI GLC+ GR A +L+E+ G P TYT I+
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 181 CFRNRKYKLGLEILSAMKRKGY 202
+ G ++L M+R GY
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGY 412
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 186/364 (51%), Gaps = 9/364 (2%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
++D ++ + M GI D+ +YN +I R S +L ++ +M++ G PDV + +
Sbjct: 25 NYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVS 84
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
SL++ Q + +A + M P +N +++G CK ++A+ +F +++
Sbjct: 85 SLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD 144
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G + VTYN L+ GLC +GR A +++++ PN IT+T ++ + K+
Sbjct: 145 GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEA 204
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+++ M R+ D F Y ++I GR+ EA ++ MVT G D+V+YNTLIN
Sbjct: 205 MKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLING 264
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+CK +++ L EM ++G D T+ +I G +AG A+ E +++ N
Sbjct: 265 FCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ---EIFSRMDSRPN 321
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL- 365
+ Y+ ++ L + +++ A+ +FE+M+ D TY+ ++H +CK + A L
Sbjct: 322 IRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFR 381
Query: 366 -LSC 368
LSC
Sbjct: 382 SLSC 385
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 157/317 (49%), Gaps = 6/317 (1%)
Query: 92 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
MI P F+ +L+ + K++ D + +F ++ G +L +YNI+I LC+ R
Sbjct: 1 MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
A ++ ++ G+ P+ +T ++++ C NR + ++++S M+ G+ D Y
Sbjct: 61 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFD-AIDLVSKMEEMGFRPDVVIYN 119
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
T+I KIG + +A + ++M DGV+ D V+YN+L+ C G+ A L+ +M +
Sbjct: 120 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 179
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
+ T T +ID K G A E M + D ++ YN +++ L G++D A
Sbjct: 180 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 239
Query: 331 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+ + M K D TY+++++ CK+KR+ +KL + G+ ++ G
Sbjct: 240 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 299
Query: 387 LRHSGCRREAKKIQSKI 403
+G A++I S++
Sbjct: 300 YFQAGRPDAAQEIFSRM 316
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C D +L+ M G PDVVTYN+LI G ++ + L EM + G
Sbjct: 226 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 285
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM---------------IC------------ 94
+ D +YN+++ FQ G+PD A +F M +C
Sbjct: 286 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLF 345
Query: 95 -----GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
++ T+NI+++G+CK ++A +FR L G P++V+Y +I G C+
Sbjct: 346 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 405
Query: 150 GRLRTARWILKELGDSGHAP 169
+ + + +++ + G P
Sbjct: 406 RQWDKSDLLYRKMQEDGLLP 425
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 76/172 (44%), Gaps = 4/172 (2%)
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV ++ +++ K + L ME G D Y++ I+I+ LC+ A +
Sbjct: 10 IVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVG 69
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
M K G++ ++ + +++ + ++ AI++ ME D Y++++ CK
Sbjct: 70 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 129
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+ A +L + GVR ++V GL SG +A ++ + M I
Sbjct: 130 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDI 181
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 172/341 (50%), Gaps = 4/341 (1%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
NRM P ++++++ +N + L + G+ P++ + N L++C
Sbjct: 81 FNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCH 140
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
L A VF +++ P T N ++ GLC AL + GF + V+
Sbjct: 141 LAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVS 200
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
Y LI GLCKAG + +L++L P+ + YTTI+ C +N++ ++ S M
Sbjct: 201 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMI 260
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
KG + + F Y T+I F +G LKEA + +M + D+ ++N LI+ KEGK++
Sbjct: 261 VKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKID 320
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A L +EM+ + + T+T LIDGLCK +++ A + M + G ++ +Y ++
Sbjct: 321 EAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILL 380
Query: 319 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
D L K G++++A F+ + VK + TY+ M++ LCKA
Sbjct: 381 DALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKA 421
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 169/355 (47%), Gaps = 4/355 (1%)
Query: 54 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 113
+ ML M PP + +++++ L + +F+ +TP T NI++N C
Sbjct: 81 FNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCH 140
Query: 114 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+ A +F + K G+ P+ +T N LIKGLC G ++ A + ++ G + ++
Sbjct: 141 LAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVS 200
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
Y T++ + + K +L ++ D Y T+I K R+ +A D +M+
Sbjct: 201 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMI 260
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
G+ ++ +YNTLI +C G L+ A+ LL+EM+ + D YT ILID L K G I
Sbjct: 261 VKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKID 320
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 349
A E M N+ Y ++D L K+ ++ AI + + M+ + D ++Y+ ++
Sbjct: 321 EAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILL 380
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
LCK RL +A + L G + +++GL +G + ++SK+
Sbjct: 381 DALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKME 435
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 137/290 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C +++ + + G PD +T N+LI G + +L D+++
Sbjct: 133 ILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQ 192
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D SY +L++ L + G+ R+ + + + P + +++ LCKN+ +A
Sbjct: 193 GFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDA 252
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G P + TYN LI G C G L+ A +L E+ P+ T+ ++
Sbjct: 253 CDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDA 312
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + + MK K + Y ++I K L+ A ++M G+Q D
Sbjct: 313 LGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPD 372
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+ SY L++ CK G+LE A + +G+ + T+ ++I+GLCKAG
Sbjct: 373 VYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAG 422
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 128/267 (47%)
Query: 20 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 79
+++ G D V+Y +LI G + LL ++ + PDV Y +++HCL +
Sbjct: 187 DKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKN 246
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
+ +A ++ +MI ++P T+N ++ G C A + ++ P++ T+
Sbjct: 247 KRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTF 306
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
NILI L K G++ A + +E+ PN +TYT+++ +N + + + MK
Sbjct: 307 NILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKE 366
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
+G D + Y ++ A K GRL+ A + + ++ G L++ +YN +IN CK G
Sbjct: 367 QGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGD 426
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGL 286
L +ME +G D T +I L
Sbjct: 427 VMDLKSKMEGKGCMPDAITFKTIICAL 453
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDA + D ++ M+ + P++VTY SLI G +N L ++ L +M E
Sbjct: 308 ILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQ 367
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PDV+SY L+ L + G+ + A + FQ ++ T+N+M+NGLCK +
Sbjct: 368 GIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDV 427
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+ + ++ G +P+ +T+ +I L + A L+E+ G
Sbjct: 428 MDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARG 473
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 4/207 (1%)
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
F + ++++ VK +Q ++GV ++ + N LIN +C + A+ +
Sbjct: 94 FHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFAN 153
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
+ K+G+ D T LI GLC G IK A + + GF + +Y +++ L K G+
Sbjct: 154 ILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGE 213
Query: 327 IDHAINVFESME---VK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+ +E VK D Y++++H LCK KR+ A L + G+
Sbjct: 214 TKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNT 273
Query: 383 VVDGLRHSGCRREAKKIQSKIRMAKIS 409
++ G G +EA + +++++ I+
Sbjct: 274 LIYGFCIMGNLKEAFSLLNEMKLKNIN 300
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 158/314 (50%), Gaps = 4/314 (1%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
E+ + P V NSL+ +LG +E V++ M + P T+N ++NGL
Sbjct: 177 EIRKFEFPMTVSPGNSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAM 236
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
+ D+A R+F ++ P++VTYN +IKG CKAG+ + A L+ + G + ITY
Sbjct: 237 FVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYM 296
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T+++ C+ + + + + M KG + VI K G+L E E M+
Sbjct: 297 TMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRK 356
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G + ++ Y LI+ Y K G +E A LL M +GF D T++++++GLCK G ++ A
Sbjct: 357 GSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEA 416
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 351
+ + G N Y+ ++D LGK G++D A +FE M K DS+ Y++++
Sbjct: 417 MDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDA 476
Query: 352 LCKAKRLPSASKLL 365
K ++ A L
Sbjct: 477 FTKHGKVDEALALF 490
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 183/403 (45%), Gaps = 5/403 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D D I + +R+ V NSLI + ++ L + +M E G
Sbjct: 158 LVDVLALAKDVDRIRFICSEIRKFEFPMTVSPGNSLIKSFGKLGMVEELLWVWRKMKENG 217
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P +++YN LM+ L D A RVF+ M G + P T+N M+ G CK T AL
Sbjct: 218 IEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQKAL 277
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R ++ G + +TY +I+ + + +E+ + G ++ ++
Sbjct: 278 EKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGL 337
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K G + M RKG + Y +I + K G +++A + +M+ +G D+
Sbjct: 338 CKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDV 397
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y+ ++N CK G++E A G + ++ LIDGL KAG + A E
Sbjct: 398 VTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEE 457
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-----FTYSSMVHNLCKAK 356
M++ G + YN ++D K GK+D A+ +F+ ME ++ +TY+ ++ + K
Sbjct: 458 MSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEH 517
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
R A KL + G+ + +A+ GL SG A KI
Sbjct: 518 RNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKI 560
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 173/397 (43%), Gaps = 45/397 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I YC+ L M G+ D +TY ++I +S S + L EM E G
Sbjct: 263 MIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKG 322
Query: 62 --IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+PP +S ++ L + GK +E VF++MI P A + ++++G K ++
Sbjct: 323 LQVPPHAFSL--VIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVED 380
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+R+ + GF P++VTY++++ GLCK GR+ A + +G A N++ Y++++
Sbjct: 381 AIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLI- 439
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
DG G K GR+ EA E+M G
Sbjct: 440 -------------------------DGLG---------KAGRVDEAERLFEEMSEKGCTR 465
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK--YTHTILIDGLCKAGNIKGARL 297
D YN LI+ + K GK++ A L ME++ CD+ YT+TILI G+ K + A
Sbjct: 466 DSYCYNALIDAFTKHGKVDEALALFKRMEEEE-GCDQTVYTYTILISGMFKEHRNEEALK 524
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES---MEVKDSFTYSSMVHNLCK 354
+ M G + L GK+ A + + M V M++ LCK
Sbjct: 525 LWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCK 584
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
A R+ A KL + G + + +++ LR G
Sbjct: 585 AGRIKEACKLADGITERGREVPGRIRTVMINALRKVG 621
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 143/308 (46%), Gaps = 6/308 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I C+ + GY + M G P+V Y LI G + + ++ LL M++
Sbjct: 332 LVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDE 391
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +Y+ +++ L + G+ +EA FQ L + ++ +++GL K D A
Sbjct: 392 GFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEA 451
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL-GDSGHAPNAITYTTIMK 179
R+F + + G + YN LI K G++ A + K + + G TYT ++
Sbjct: 452 ERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILIS 511
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
F+ + + L++ M KG T + G++ A ++++ GV L
Sbjct: 512 GMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDELAPMGVIL 571
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D + +IN CK G+++ A L D + ++G E T++I+ L K G A L +
Sbjct: 572 D-AACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGK---ADLAM 627
Query: 300 EYM-NKIG 306
+ M +KIG
Sbjct: 628 KLMHSKIG 635
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 182/374 (48%), Gaps = 3/374 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC+ S D +L+ M + G++P +Y+ LIAG RN LS ++L EM E G
Sbjct: 414 LINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERG 473
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I + +++ +L++ + K DEA R+F MI ++ P TFN+M+ G C A
Sbjct: 474 IAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAF 533
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + + G P+ TY LI GLC + A + +L +S N + T ++
Sbjct: 534 QLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGF 593
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
FR ++ + M +G D + ++ A +K +++ +M GV+ D
Sbjct: 594 FREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDD 653
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ Y +I+ KE + A D+M G+ + THT+LI+ LCK+G + A L +
Sbjct: 654 IFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKE 713
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDSFTYSSMVHNLCKAKRL 358
M N YNC +D +G ++ A ++ +M + +++ ++ LCKA ++
Sbjct: 714 MLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKI 773
Query: 359 PSASKLLLSCLKSG 372
A L+ +SG
Sbjct: 774 QEAIDLMSKITESG 787
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 173/374 (46%), Gaps = 18/374 (4%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
I AYC+ + D ++ RM G+ V YN L+ G +N + ++++ + M+ +G+
Sbjct: 205 IRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGV 264
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
D +Y +L++ ++ + + A R+ DMI P A + M++ L K + A
Sbjct: 265 TADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS 324
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ L G VP + YN LI LCK R A + KE+ G PN +TY ++
Sbjct: 325 LACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC 384
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ + L + M+ KG + Y ++I + K G L A + MV +G+
Sbjct: 385 KRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAA 444
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
SY+ LI C+ G L + L EM ++G + YT T LI+G CK + A + M
Sbjct: 445 SYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM 504
Query: 303 -------NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHN 351
N++ F+ +E Y C+V G I A +++ M D++TY S++
Sbjct: 505 IDSNVIPNEVTFNVMIEGY-CLV------GNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557
Query: 352 LCKAKRLPSASKLL 365
LC + A++ +
Sbjct: 558 LCLTSGVSKANEFV 571
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 186/406 (45%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ FD + M G+ P+ VTY LI + ++ +L L D+M + G
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I V+ YNSL++ + G D A + M+ LTP A+++ ++ GLC+N + +
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 463
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ R + + G T+ LI G CK ++ A + ++ DS PN +T+ +++
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ M G D + Y ++I+ + +A +++ + L+
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 583
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
S L+ + +EG+ Y L DEM +G + D + TI++ K + + + +
Sbjct: 584 FSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 643
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M + G + Y C++D L K+ + A+N ++ M V ++ T++ +++NLCK+
Sbjct: 644 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGY 703
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L SA L L V K +D G +AK + S +
Sbjct: 704 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 147/294 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ +C+ + I + M G P + +I + L+ + L ++ ++G
Sbjct: 274 LVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLG 333
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V++YN+L+ L + + D+A+R+F++M L P T+ I+++ LCK ++AL
Sbjct: 334 MVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDAL 393
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ G + YN LI G CK G L AR +L + G P A +Y+ ++
Sbjct: 394 CLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGL 453
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
RN +E+ M +G ++ + + +I F K ++ EA ++M+ V +
Sbjct: 454 CRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 513
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
V++N +I YC G + A+ L D+M + G + D YT+ LI GLC + A
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKA 567
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 172/403 (42%), Gaps = 41/403 (10%)
Query: 25 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 84
+GI+ + T + ++ + + + DL D+ML+ G+ D + Y + + + D
Sbjct: 157 SGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDG 216
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
A + M + +N+++ GLCKN A+ + + G + VTY L+
Sbjct: 217 ARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVY 276
Query: 145 GLCKAGRLRTARWILKE-----------------------------------LGDSGHAP 169
G C+ L A I + LGD G P
Sbjct: 277 GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVP 336
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
N Y ++ +N ++ + M +G + Y +I A K G +++A
Sbjct: 337 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 396
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
++M G+++ + YN+LIN YCK+G L+ A LL M K+G +++ LI GLC+
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 456
Query: 290 GNIKG-ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFT 344
G++ LH E M + G N + +++ KD K+D A +F+ M + + T
Sbjct: 457 GDLSSCMELHRE-MAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 515
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
++ M+ C + A +L ++ G++ ++++ GL
Sbjct: 516 FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 185/433 (42%), Gaps = 48/433 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C+ D + ++M ++ + P+ VT+N +I G + + L D+M+EMG
Sbjct: 484 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG 543
Query: 62 IPPDVWSYNSL-----------------------------------MHCLFQLGKPDEAN 86
+ PD ++Y SL ++ F+ G+ E
Sbjct: 544 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETY 603
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
++ +M + +F I++ K + + +FR +++ G P+ + Y +I L
Sbjct: 604 HLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 663
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF-D 205
K + A ++ G++PN +T+T ++ ++ Y E+L G +
Sbjct: 664 SKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKS-GYLGSAELLCKEMLAGNVLPN 722
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
F Y + F G +++A D M+ G IVS+N LI CK GK++ A L+
Sbjct: 723 KFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMS 781
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
++ + GF D +++ +I LCK G+I A M G ++ AYN + G
Sbjct: 782 KITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHG 841
Query: 326 KIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLL----SCLKSGVRILKSAQK 381
+ D A+ ++ +M S + N + L S L+L SC + + ++ +
Sbjct: 842 ESDKALGIYTNM------IRSGVQPNWDTYRALLSGISLMLHYDFSCFRGTKQYIQISVY 895
Query: 382 AVVDGLRHSGCRR 394
++D + RR
Sbjct: 896 ELMDSTHNKSHRR 908
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 128/293 (43%), Gaps = 4/293 (1%)
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
T + +L L K R A +F + + G + Y I+ C++ L AR ++ +
Sbjct: 165 TASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRM 224
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
G +A+ Y +M +N + + +E+ + M G T D Y T++ F ++ L
Sbjct: 225 ESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEEL 284
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
+ A M+ G + + +I+ K+ +E A+ L ++ G + + + L
Sbjct: 285 EMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNAL 344
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 340
ID LCK A + M G + N Y ++ L K G I+ A+ +F+ M K
Sbjct: 345 IDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGI 404
Query: 341 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ Y+S+++ CK L A LL +K G+ ++ ++ GL +G
Sbjct: 405 KVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 113/276 (40%), Gaps = 39/276 (14%)
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
SG N T + I+ + R++ L ++ M + G D + Y I A+ + L
Sbjct: 157 SGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDG 216
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A + +M ++GV+ V YN L+ CK +++ A + + M G D+ T+ L+
Sbjct: 217 ARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVY 276
Query: 285 GLCKAGNIKGARLHLEYMNKIGF-----------------------------------DS 309
G C+ ++ A M ++GF
Sbjct: 277 GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVP 336
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
N+ AYN ++D+L K+ + D A +F+ M + + TY+ ++H LCK + A L
Sbjct: 337 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 396
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
G+++ ++++G G A+ + S
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLS 432
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 69/130 (53%), Gaps = 2/130 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ +++++ E+G SPD ++Y+++I + ++ + +L +EML
Sbjct: 762 ILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK 821
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV +YN + G+ D+A ++ +MI + P T+ +L+G+ + D
Sbjct: 822 GLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYD-- 879
Query: 121 LRMFRGLQKH 130
FRG +++
Sbjct: 880 FSCFRGTKQY 889
>gi|297844198|ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335822|gb|EFH66239.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 172/369 (46%), Gaps = 5/369 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
I C+ F+ +L M G PD+ +N + R + + ++ M++ G
Sbjct: 85 FISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRG 144
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV SY L++ LF+ GK +A ++ MI ++P ++ GLC R D A
Sbjct: 145 REPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAY 204
Query: 122 RMFRGLQKHGFVP-ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
M K V +V YN LI G CKAGR+ A + + G P+ +TY ++
Sbjct: 205 EMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNY 264
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ N K +++ M R G D + Y ++ ++ +M + + D
Sbjct: 265 YYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEPRGFCD 324
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+VSY+TLI +C+ + AY L +EM ++G + T T LI + GN A+ L+
Sbjct: 325 VVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLD 384
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EV-KDSFTYSSMVHNLCKAK 356
M ++G + Y I+D L K G +D A +F M E+ D+ +Y+S++ LC++
Sbjct: 385 QMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSG 444
Query: 357 RLPSASKLL 365
R+ A KL
Sbjct: 445 RVTEAIKLF 453
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 141/292 (48%), Gaps = 12/292 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ + + + M + G PD+VTYN L+ N++L + ++ EM+ G
Sbjct: 226 LISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSG 285
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTP---C-TATFNIMLNGLCKNR 115
I D +SYN L+ HC ++ PD R + M+ ++ P C +++ ++ C+
Sbjct: 286 IQLDAYSYNQLLKRHC--RVSHPD---RCYSFML-KEMEPRGFCDVVSYSTLIETFCRAS 339
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
T A ++F +++ G V +VT+ LIK + G A+ +L ++ + G +P+ I YT
Sbjct: 340 NTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYT 399
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
TI+ ++ I + M T D Y ++I+ + GR+ EA E M
Sbjct: 400 TILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGK 459
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
D +++ +I +E KL AAY + D+M +GF D+ LI C
Sbjct: 460 ECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 145/310 (46%), Gaps = 7/310 (2%)
Query: 2 LIDAYCQFVSFDAGYTIL-NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L+ C D Y ++ ++ A + +V YN+LI+G + + + L M ++
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKI 249
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN L++ + A V +M+ + ++N +L C+ + D
Sbjct: 250 GCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRC 309
Query: 121 LR-MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
M + ++ GF ++V+Y+ LI+ C+A + A + +E+ G N +T+T+++K
Sbjct: 310 YSFMLKEMEPRGFC-DVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIK 368
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
R + ++L M G + D Y T++ K G + +A M+ +
Sbjct: 369 AFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITP 428
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHTILIDGLCKAGNIKGARL 297
D +SYN+LI+ C+ G++ A L ++M +G EC D+ T +I GL + + A
Sbjct: 429 DAISYNSLISGLCRSGRVTEAIKLFEDM--KGKECCPDELTFKFIIGGLIREKKLSAAYK 486
Query: 298 HLEYMNKIGF 307
+ M GF
Sbjct: 487 VWDQMMDKGF 496
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 128/293 (43%), Gaps = 5/293 (1%)
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+Y S + L + G D A +VF +M ++ +N + L K + A ++R +
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRDM 70
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
GF TY+ I GLCK + +L+++ G P+ + + R K
Sbjct: 71 MPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENKV 130
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
++ M ++G D Y +I + G++ +A + M+ GV D + L
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAAL 190
Query: 248 INLYCKEGKLEAAY-LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
+ C K++ AY ++ +E++ + + LI G CKAG I+ A +M+KIG
Sbjct: 191 VVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKIG 250
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ +L YN +++ + + A V M D+++Y+ ++ C+
Sbjct: 251 CEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRV 303
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 5/233 (2%)
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+ Y I L K+G + A + E+ S + + Y + + +++L I
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRD 69
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M G++ F Y I+ K+ + + + M T G DI ++N ++L C+E K
Sbjct: 70 MMPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENK 129
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+ A M ++G E D ++TILI+GL +AG + A M + G + +A
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189
Query: 317 IVDRLGKDGKIDHAINV----FESMEVKDSF-TYSSMVHNLCKAKRLPSASKL 364
+V L K+D A + +S VK S Y++++ CKA R+ A L
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEAL 242
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 177/376 (47%), Gaps = 7/376 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHC 75
+L+RM E PD ++YN++I +S +LD++ M + G PDV S+N+++H
Sbjct: 182 LLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHG 241
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
F+ G+ +A +F +M+ + P T+N +++ LCK R D A + R + G P+
Sbjct: 242 FFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPD 301
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
VTYN +I G +G + + + +++ G P+ +T+++ M ++ + K EI
Sbjct: 302 GVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQ 361
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M KG+ D Y ++ + GR + + M G+ + N LI+ + K G
Sbjct: 362 YMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRG 421
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
++ A L+ EM+ QG + T++ LI C+ G + A M IG + N Y+
Sbjct: 422 MMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYH 481
Query: 316 CIVDRLGKDGKIDHAINVFESMEVK-----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
++ G + A M K + +SS++H+LC R+ A + +
Sbjct: 482 SLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIH 541
Query: 371 SGVRILKSAQKAVVDG 386
G R +++DG
Sbjct: 542 IGDRPTIVTFNSLIDG 557
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 194/400 (48%), Gaps = 11/400 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++DA C+ + D +L +M + G+ PD VTYN++I G + + S + +M G
Sbjct: 273 IVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKG 332
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC-KNRYTDNA 120
+ PD +++S M L + G+ +A +FQ M P +++I+L+G + R+ D
Sbjct: 333 LIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMN 392
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G V NILI K G + A + E+ G PN +TY+T++
Sbjct: 393 -NLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISA 451
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV-QL 239
R + +E S M G + Y ++I F G L +A +++ +M++ G+ +
Sbjct: 452 FCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRP 511
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+IV ++++I+ C EG++ A + + + G T LIDG C G ++ A L
Sbjct: 512 NIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVL 571
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKD-SFTYSSMVHNLCKA 355
+ M +G + ++ N +V K GKID + +F M +VK + TY+ ++ L +A
Sbjct: 572 DAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRA 631
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
R +A K+ + SG + K ++ GL CR +
Sbjct: 632 GRTSAAKKMFHEMIDSGTAVDIDTYKILLKGL----CRND 667
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 152/339 (44%), Gaps = 1/339 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI A+ + D + M+ G+ P+VVTY++LI+ R L+ +++ +M+ +
Sbjct: 412 ILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISI 471
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL-TPCTATFNIMLNGLCKNRYTDN 119
GI P+ Y+SL+H G +A +M+ L P F+ +++ LC +
Sbjct: 472 GIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMD 531
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +F + G P +VT+N LI G C G++ A +L + G P+ +T T++
Sbjct: 532 AQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVS 591
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
++ K GL + M K Y V+ ++ GR A +M+ G +
Sbjct: 592 GYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAV 651
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DI +Y L+ C+ + A L ++ + D +I+ L K + A
Sbjct: 652 DIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLF 711
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
++ G N+ Y ++ L K+G ++ A +F SME
Sbjct: 712 AAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSME 750
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 121/255 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC + + +L+ M GI PDVVT N+L++G ++ + L L EML
Sbjct: 554 LIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKK 613
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P +YN ++ L + G+ A ++F +MI T+ I+L GLC+N TD A+
Sbjct: 614 VKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAI 673
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F L ++ N +I L K R A + + SG PN TY +++
Sbjct: 674 TLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNL 733
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + S+M++ G +I ++ G + +A YM ++ + L+
Sbjct: 734 LKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEA 793
Query: 242 VSYNTLINLYCKEGK 256
+ + L++L+ +GK
Sbjct: 794 STTSLLMSLFSSKGK 808
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 137/297 (46%), Gaps = 39/297 (13%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ N + G P +VT+NSLI G + + +LD M+ +GI PDV + N+L+
Sbjct: 535 VFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYC 594
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ GK D+ +F++M+ + P T T+NI+L+GL + T A +MF + G ++
Sbjct: 595 KSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDID 654
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY IL+KGLC+ A + +LG M C K + IL+
Sbjct: 655 TYKILLKGLCRNDLTDEAITLFHKLG-------------AMDC-------KFDITILN-- 692
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
T+I A K+ R +EA D + T G+ ++ +Y +I KEG +
Sbjct: 693 -------------TMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSV 739
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI-GFDSNLEA 313
E A + MEK G +I L + G+I A YM+K+ G +LEA
Sbjct: 740 EEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGY---YMSKVDGTIISLEA 793
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 140/327 (42%), Gaps = 1/327 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI A+C+ ++M GI P+ Y+SLI G + L + + + EM+ G
Sbjct: 448 LISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKG 507
Query: 62 IP-PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P++ ++S++H L G+ +A VF +I P TFN +++G C + A
Sbjct: 508 LHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKA 567
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P++VT N L+ G CK+G++ + +E+ P +TY ++
Sbjct: 568 FGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDG 627
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + ++ M G D Y ++ + EA ++ + D
Sbjct: 628 LLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFD 687
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I NT+IN K + E A L + G + T+ ++I L K G+++ A
Sbjct: 688 ITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFS 747
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKI 327
M K G + N I+ L + G I
Sbjct: 748 SMEKSGCAPSSRLLNDIIRMLLQKGDI 774
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 128/281 (45%), Gaps = 3/281 (1%)
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P V +Y LM C + +PD ++ L T L LC + TD A+
Sbjct: 121 PLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVD 180
Query: 123 -MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH--APNAITYTTIMK 179
+ + + VP+ ++YN +IK LC R + A +++ + G +P+ +++ T++
Sbjct: 181 VLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIH 240
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
F+ + + + M +KG D Y +++ A K + +A + QMV GV+
Sbjct: 241 GFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEP 300
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D V+YN +I+ Y G + + + +M +G D T + + LCK G K A
Sbjct: 301 DGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIF 360
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
+YM G ++ +Y+ ++ +G+ N+F SM K
Sbjct: 361 QYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADK 401
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 149/362 (41%), Gaps = 37/362 (10%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLS----CSLD---LLDEMLEMGIPPDVWSYN 70
+L R A SP + ++ +A + + C+ D L DE+L G P S N
Sbjct: 22 LLPRRSSATTSPPLRCWDPQVAFVAAIARVRAGTFCTDDAHHLFDELLRQGTPVHNRSLN 81
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+ L + PD + C + A + N +C+ +
Sbjct: 82 DFLAALAR--APDSVS-------CSN---GPALVLALFNRICREEAGPRVAPL------- 122
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKL 189
+ TY IL+ C+A R + L +G I TT +KC C R +
Sbjct: 123 ----TVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEA 178
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG--VQLDIVSYNTL 247
+L M D Y TVI + R +EA D +++M +G D+VS+NT+
Sbjct: 179 VDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTV 238
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
I+ + K+G++ A L +EM ++G D T+ ++D LCKA + A L M G
Sbjct: 239 IHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGV 298
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASK 363
+ + YN I+ G + +F M K D+ T+SS + +LCK R A +
Sbjct: 299 EPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEE 358
Query: 364 LL 365
+
Sbjct: 359 IF 360
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 116/304 (38%), Gaps = 50/304 (16%)
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR-----------LRTARWILKELGDS 165
TD+A +F L + G + N + L +A L I +E
Sbjct: 58 TDDAHHLFDELLRQGTPVHNRSLNDFLAALARAPDSVSCSNGPALVLALFNRICREEAGP 117
Query: 166 GHAPNAI-TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
AP + TY +M CC R R+ LG ++ + R G T + R E
Sbjct: 118 RVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDE 177
Query: 225 ATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A D + +M D +SYNT+I C + + + A ++ M K+G C
Sbjct: 178 AVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSP------- 230
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----V 339
++ ++N ++ K G++ A N+F M V
Sbjct: 231 --------------------------DVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVV 264
Query: 340 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D TY+S+V LCKA+ + A +L + GV A++ G SG +E+ K+
Sbjct: 265 PDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKM 324
Query: 400 QSKI 403
K+
Sbjct: 325 FRKM 328
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 89/183 (48%)
Query: 14 AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 73
A + + M ++G + D+ TY L+ G RN L ++ L ++ M D+ N+++
Sbjct: 636 AAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMI 695
Query: 74 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 133
+ L+++ + +EAN +F + L P +T+ +M+ L K + A MF ++K G
Sbjct: 696 NALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCA 755
Query: 134 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 193
P N +I+ L + G + A + + ++ + + A T + +M K++ ++
Sbjct: 756 PSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIKF 815
Query: 194 LSA 196
L A
Sbjct: 816 LPA 818
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 196/416 (47%), Gaps = 10/416 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + RM++ G P+VVTY +LI G R ++ +L L EML
Sbjct: 167 LIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGT 226
Query: 62 IP------PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
P P+++SYN ++ L ++GK EA R+F +M+ + P TF+ +++ LCK
Sbjct: 227 SPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEG 286
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
A + + G VP+L T+ LI+G C G L +A+ + + G+ P+ I+YT
Sbjct: 287 MVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYT 346
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
++ + + +++ + M R G D +C ++ G++ +A +
Sbjct: 347 VLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPH 406
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
V ++ + ++ CK G L A L +E++ + D + LIDGLCKA ++ A
Sbjct: 407 AVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETA 466
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 351
E +++ G ++ Y +++ K+G++D+A +F+ ME + TYS+++H
Sbjct: 467 WELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHG 526
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
K +L KLL ++ V + S V D + RE I + + K
Sbjct: 527 FYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDILQRFPVQK 582
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 180/384 (46%), Gaps = 10/384 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ A + + +++ +M AG+SP+ T N LI + + L + ++
Sbjct: 96 LLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRR 155
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +Y SL+ L + EA R+F M P T+ ++ GLC+ + A
Sbjct: 156 GYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLA 215
Query: 121 LR----MFRGLQKHGF--VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
L+ M G + P + +YNI+I LCK G+ + A+ + E+ D G P+ +T+
Sbjct: 216 LKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTF 275
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
+ ++ + + L M +G D F + ++I F +G L A + M +
Sbjct: 276 SALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPS 335
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G + D++SY LI YCK +E A L +EM + G D T +L+ GL AG +
Sbjct: 336 KGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGD 395
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 350
A+ + NL + +D L K+G + A+ +F ++ D +++ ++
Sbjct: 396 AKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLID 455
Query: 351 NLCKAKRLPSASKLLLSCLKSGVR 374
LCKA++L +A +L + G++
Sbjct: 456 GLCKARKLETAWELFEKLSQEGLQ 479
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 170/365 (46%), Gaps = 15/365 (4%)
Query: 50 SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 109
+L D M+ + S+N L+ L ++ + +++ M L+P T NI++N
Sbjct: 80 ALQFFDLMMR-----SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILIN 134
Query: 110 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 169
LC L G+ + G++P++VTY LIKGLC R+ A + + G P
Sbjct: 135 CLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWP 194
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF------DGFGYCTVIAAFVKIGRLK 223
N +TY T++K R L L++ M + + F Y +I KIG+ K
Sbjct: 195 NVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWK 254
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
EA +MV GV+ D+V+++ LI+ CKEG + A L+ M +G D +T T LI
Sbjct: 255 EAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLI 314
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EV 339
+G C G++ A+ M G++ ++ +Y ++ K ++ A+ ++ M +
Sbjct: 315 EGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKW 374
Query: 340 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D T+ ++ L A ++ A KL V +DGL +GC EA ++
Sbjct: 375 PDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMEL 434
Query: 400 QSKIR 404
++++
Sbjct: 435 FNELK 439
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 164/341 (48%), Gaps = 35/341 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ + + N M + G+ PDVVT+++LI + ++ + L+ M+
Sbjct: 242 IIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLR 301
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD++++ SL+ +G D A +F M P ++ +++ G CK + A
Sbjct: 302 GIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEA 361
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++++ + + G P++ T+ +L+KGL AG++ A+ + + P+A+ +
Sbjct: 362 MKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVV-----KPHAVPKNLYICS 416
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F + G C K G L EA + ++ + ++LD
Sbjct: 417 VFLD-----------------------GLC-------KNGCLFEAMELFNELKSYNMKLD 446
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I S+N LI+ CK KLE A+ L +++ ++G + D T+ I+I+G CK G + A + +
Sbjct: 447 IESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQ 506
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 341
M + G NL Y+ ++ K+ K++ + + M KD
Sbjct: 507 MMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKD 547
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 173/368 (47%), Gaps = 10/368 (2%)
Query: 30 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 89
++++N L+ + S L +M G+ P+ ++ N L++CL + + E
Sbjct: 90 SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149
Query: 90 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
++ P T+ ++ GLC A R+F +QK G P +VTY LIKGLC+
Sbjct: 150 AGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRT 209
Query: 150 GRLRTARWILKEL--GDSGHA----PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G + A + +E+ G S +A PN +Y I+ + K+K + + M +G
Sbjct: 210 GNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVR 269
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D + +I K G + EA ++E M+ G+ D+ ++ +LI +C G L++A L
Sbjct: 270 PDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKEL 329
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
M +G+E D ++T+LI G CK N++ A M ++G +++ + ++ L
Sbjct: 330 FLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFL 389
Query: 324 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
GK+ A +F ++ K+ + S + LCK L A +L +++ +
Sbjct: 390 AGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIES 449
Query: 380 QKAVVDGL 387
++DGL
Sbjct: 450 FNCLIDGL 457
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 182/374 (48%), Gaps = 3/374 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC+ S D +L+ M + G++P +Y+ LIAG RN LS ++L EM E G
Sbjct: 437 LINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERG 496
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I + +++ +L++ + K DEA R+F MI ++ P TFN+M+ G C A
Sbjct: 497 IAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAF 556
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + + G P+ TY LI GLC + A + +L +S N + T ++
Sbjct: 557 QLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGF 616
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
FR ++ + M +G D + ++ A +K +++ +M GV+ D
Sbjct: 617 FREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDD 676
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ Y +I+ KE + A D+M G+ + THT+LI+ LCK+G + A L +
Sbjct: 677 IFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKE 736
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDSFTYSSMVHNLCKAKRL 358
M N YNC +D +G ++ A ++ +M + +++ ++ LCKA ++
Sbjct: 737 MLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKI 796
Query: 359 PSASKLLLSCLKSG 372
A L+ +SG
Sbjct: 797 QEAIDLMSKITESG 810
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 173/374 (46%), Gaps = 18/374 (4%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
I AYC+ + D ++ RM G+ V YN L+ G +N + ++++ + M+ +G+
Sbjct: 228 IRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGV 287
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
D +Y +L++ ++ + + A R+ DMI P A + M++ L K + A
Sbjct: 288 TADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS 347
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ L G VP + YN LI LCK R A + KE+ G PN +TY ++
Sbjct: 348 LACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC 407
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ + L + M+ KG + Y ++I + K G L A + MV +G+
Sbjct: 408 KRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAA 467
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
SY+ LI C+ G L + L EM ++G + YT T LI+G CK + A + M
Sbjct: 468 SYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM 527
Query: 303 -------NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHN 351
N++ F+ +E Y C+V G I A +++ M D++TY S++
Sbjct: 528 IDSNVIPNEVTFNVMIEGY-CLV------GNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 580
Query: 352 LCKAKRLPSASKLL 365
LC + A++ +
Sbjct: 581 LCLTSGVSKANEFV 594
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 186/406 (45%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ FD + M G+ P+ VTY LI + ++ +L L D+M + G
Sbjct: 367 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 426
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I V+ YNSL++ + G D A + M+ LTP A+++ ++ GLC+N + +
Sbjct: 427 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 486
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ R + + G T+ LI G CK ++ A + ++ DS PN +T+ +++
Sbjct: 487 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 546
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ M G D + Y ++I+ + +A +++ + L+
Sbjct: 547 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 606
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
S L+ + +EG+ Y L DEM +G + D + TI++ K + + + +
Sbjct: 607 FSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 666
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M + G + Y C++D L K+ + A+N ++ M V ++ T++ +++NLCK+
Sbjct: 667 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGY 726
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L SA L L V K +D G +AK + S +
Sbjct: 727 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 772
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 147/294 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ +C+ + I + M G P + +I + L+ + L ++ ++G
Sbjct: 297 LVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLG 356
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V++YN+L+ L + + D+A+R+F++M L P T+ I+++ LCK ++AL
Sbjct: 357 MVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDAL 416
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ G + YN LI G CK G L AR +L + G P A +Y+ ++
Sbjct: 417 CLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGL 476
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
RN +E+ M +G ++ + + +I F K ++ EA ++M+ V +
Sbjct: 477 CRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 536
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
V++N +I YC G + A+ L D+M + G + D YT+ LI GLC + A
Sbjct: 537 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKA 590
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 172/403 (42%), Gaps = 41/403 (10%)
Query: 25 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 84
+GI+ + T + ++ + + + DL D+ML+ G+ D + Y + + + D
Sbjct: 180 SGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDG 239
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
A + M + +N+++ GLCKN A+ + + G + VTY L+
Sbjct: 240 ARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVY 299
Query: 145 GLCKAGRLRTARWILKE-----------------------------------LGDSGHAP 169
G C+ L A I + LGD G P
Sbjct: 300 GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVP 359
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
N Y ++ +N ++ + M +G + Y +I A K G +++A
Sbjct: 360 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 419
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
++M G+++ + YN+LIN YCK+G L+ A LL M K+G +++ LI GLC+
Sbjct: 420 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 479
Query: 290 GNIKG-ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFT 344
G++ LH E M + G N + +++ KD K+D A +F+ M + + T
Sbjct: 480 GDLSSCMELHRE-MAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 538
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
++ M+ C + A +L ++ G++ ++++ GL
Sbjct: 539 FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 581
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 163/372 (43%), Gaps = 38/372 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C+ D + ++M ++ + P+ VT+N +I G + + L D+M+EMG
Sbjct: 507 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG 566
Query: 62 IPPDVWSYNSL-----------------------------------MHCLFQLGKPDEAN 86
+ PD ++Y SL ++ F+ G+ E
Sbjct: 567 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETY 626
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
++ +M + +F I++ K + + +FR +++ G P+ + Y +I L
Sbjct: 627 HLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 686
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF-D 205
K + A ++ G++PN +T+T ++ ++ Y E+L G +
Sbjct: 687 SKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKS-GYLGSAELLCKEMLAGNVLPN 745
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
F Y + F G +++A D M+ G IVS+N LI CK GK++ A L+
Sbjct: 746 KFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMS 804
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
++ + GF D +++ +I LCK G+I A M G ++ AYN + G
Sbjct: 805 KITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHG 864
Query: 326 KIDHAINVFESM 337
+ D A+ ++ +M
Sbjct: 865 ESDKALGIYTNM 876
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 126/275 (45%), Gaps = 1/275 (0%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F Y + + M G+ D+V++ ++ A + S L EM E G+ PD Y
Sbjct: 622 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTC 681
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
++ L + +A + M+ +P T T +++N LCK+ Y +A + + +
Sbjct: 682 MIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 741
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
+P TYN + G + A+ L GH + +++ ++K + K + +
Sbjct: 742 VLPNKFTYNCFLDYFATEGDMEKAK-DLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAI 800
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+++S + G++ D Y T+I K+G + +A + +M+ G++ D+V+YN I
Sbjct: 801 DLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWC 860
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
G+ + A + M + G + + T+ L+ G+
Sbjct: 861 NVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 895
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 1/200 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+IDA + + ++M G SP+ VT+ LI ++ L + L EML
Sbjct: 682 MIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 741
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ ++YN + G ++A + M+ G L +FNI++ GLCK A+
Sbjct: 742 VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAI 800
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + GF P+ ++Y+ +I LCK G + A + E+ G P+ + Y ++ C
Sbjct: 801 DLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWC 860
Query: 182 FRNRKYKLGLEILSAMKRKG 201
+ + L I + M R G
Sbjct: 861 NVHGESDKALGIYTNMIRSG 880
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 128/293 (43%), Gaps = 4/293 (1%)
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
T + +L L K R A +F + + G + Y I+ C++ L AR ++ +
Sbjct: 188 TASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRM 247
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
G +A+ Y +M +N + + +E+ + M G T D Y T++ F ++ L
Sbjct: 248 ESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEEL 307
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
+ A M+ G + + +I+ K+ +E A+ L ++ G + + + L
Sbjct: 308 EMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNAL 367
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 340
ID LCK A + M G + N Y ++ L K G I+ A+ +F+ M K
Sbjct: 368 IDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGI 427
Query: 341 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ Y+S+++ CK L A LL +K G+ ++ ++ GL +G
Sbjct: 428 KVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 480
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 113/276 (40%), Gaps = 39/276 (14%)
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
SG N T + I+ + R++ L ++ M + G D + Y I A+ + L
Sbjct: 180 SGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDG 239
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A + +M ++GV+ V YN L+ CK +++ A + + M G D+ T+ L+
Sbjct: 240 ARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVY 299
Query: 285 GLCKAGNIKGARLHLEYMNKIGF-----------------------------------DS 309
G C+ ++ A M ++GF
Sbjct: 300 GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVP 359
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
N+ AYN ++D+L K+ + D A +F+ M + + TY+ ++H LCK + A L
Sbjct: 360 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 419
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
G+++ ++++G G A+ + S
Sbjct: 420 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLS 455
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 61/111 (54%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ +++++ E+G SPD ++Y+++I + ++ + +L +EML
Sbjct: 785 ILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK 844
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 111
G+ PDV +YN + G+ D+A ++ +MI + P T+ +L+G+
Sbjct: 845 GLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 895
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 159/309 (51%), Gaps = 5/309 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ + Y + + M I P+V+TYN+LI L + LL EM+
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKN 215
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV++++ L+ L + GK A ++F M+ + P ++NIM+NGLCK + D A+
Sbjct: 216 INPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAM 273
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ R + VP+ VTYN LI GLCK+GR+ +A ++ E+ G + +TYT+++
Sbjct: 274 NLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDAL 333
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N+ + MK +G + Y +I K GRLK A + + ++ G +D+
Sbjct: 334 CKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDV 393
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC-KAGNIKGARLHLE 300
+Y +I+ CKEG + A + +ME G + T I+I L K N K +L E
Sbjct: 394 WTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHE 453
Query: 301 YMNK--IGF 307
+ K +GF
Sbjct: 454 MIAKGLLGF 462
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 180/366 (49%), Gaps = 8/366 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C +++L ++ + G P+ +T+ +L+ G + L D+++
Sbjct: 50 ILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQ 109
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ SY +L++ L + G+ A ++ + + P ++ +++GLCK++ + A
Sbjct: 110 AFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEA 169
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + P ++TYN LI C AG+L A +L E+ P+ T++ ++
Sbjct: 170 YDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDA 229
Query: 181 -CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
C + K +I AM + G + + Y +I K R+ EA + + +M+ +
Sbjct: 230 LCKEGKNAK---QIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVP 286
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D V+YN+LI+ CK G++ +A L++EM +G D T+T L+D LCK N+ A
Sbjct: 287 DTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALF 346
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
M + G + Y ++D L K G++ +A +F+ + VK D +TY+ M+ LCK
Sbjct: 347 MKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKE 406
Query: 356 KRLPSA 361
A
Sbjct: 407 GMFDEA 412
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 184/389 (47%), Gaps = 8/389 (2%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
+M GI ++VT + LI ++ S LL ++L++G P+ ++ +LM L G
Sbjct: 35 QMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKG 94
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
+ + ++ ++ +LNGLCK T A+++ R ++ P +V Y+
Sbjct: 95 EVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYS 154
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG-LEILSAMKR 199
+I GLCK + A + E+ PN ITY T++ C F +G +L M
Sbjct: 155 AIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLI-CAFCLAGQLMGAFSLLHEMIL 213
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
K D + + +I A K G K A MV GV ++ SYN +IN CK +++
Sbjct: 214 KNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDE 271
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A LL EM + D T+ LIDGLCK+G I A + M+ G +++ Y ++D
Sbjct: 272 AMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLD 331
Query: 320 RLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
L K+ +D A +F M+ + +TY++++ LCK RL +A +L L G I
Sbjct: 332 ALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCI 391
Query: 376 LKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++ GL G EA I+SK+
Sbjct: 392 DVWTYTVMISGLCKEGMFDEALAIKSKME 420
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 169/340 (49%), Gaps = 4/340 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ +L + + P+VV Y+++I G ++ L++ + DL EM
Sbjct: 121 LLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDARE 180
Query: 62 IPPDVWSYNSLMHCLFQL-GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P+V +YN+L+ C F L G+ A + +MI ++ P TF+I+++ LCK NA
Sbjct: 181 IFPNVITYNTLI-CAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKE--GKNA 237
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F + + G P + +YNI+I GLCK R+ A +L+E+ P+ +TY +++
Sbjct: 238 KQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDG 297
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ + L +++ M +G D Y +++ A K L +AT +M G+Q
Sbjct: 298 LCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPT 357
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +Y LI+ CK G+L+ A L + +G D +T+T++I GLCK G A
Sbjct: 358 MYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKS 417
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
M G N + I+ L + + D A + M K
Sbjct: 418 KMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAK 457
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 173/376 (46%), Gaps = 7/376 (1%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
SP ++ +N ++ + + L +M GI ++ + + L++C LG+ +
Sbjct: 8 SP-IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFS 66
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
+ ++ P T T+ ++ GLC L + F V+Y L+ GLC
Sbjct: 67 LLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLC 126
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K G R A +L+ + D PN + Y+ I+ +++ ++ S M + +
Sbjct: 127 KTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVI 186
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y T+I AF G+L A + +M+ + D+ +++ LI+ CKEGK A + M
Sbjct: 187 TYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAM 244
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
+ G + Y++ I+I+GLCK + A L M + YN ++D L K G+I
Sbjct: 245 VQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRI 304
Query: 328 DHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
A+N+ M + D TY+S++ LCK + L A+ L + + G++ A+
Sbjct: 305 TSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTAL 364
Query: 384 VDGLRHSGCRREAKKI 399
+DGL G + A+++
Sbjct: 365 IDGLCKGGRLKNAQEL 380
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 104/201 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ D +L M + PD VTYNSLI G ++ ++ +L+L++EM
Sbjct: 258 IMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHR 317
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P DV +Y SL+ L + D+A +F M + P T+ +++GLCK NA
Sbjct: 318 GQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNA 377
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ L G ++ TY ++I GLCK G A I ++ D+G PNA+T+ I++
Sbjct: 378 QELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRS 437
Query: 181 CFRNRKYKLGLEILSAMKRKG 201
F + ++L M KG
Sbjct: 438 LFEKDENDKAEKLLHEMIAKG 458
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 108/237 (45%), Gaps = 6/237 (2%)
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
H I + I+ + + Y + + M KG + +I F +G++ +
Sbjct: 6 HTSPIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSF 65
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ +++ G + +++ TL+ C +G+++ D++ Q F+ ++ ++ L++GL
Sbjct: 66 SLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGL 125
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF--- 343
CK G + A L + N+ Y+ I+D L KD ++ A +++ M+ ++ F
Sbjct: 126 CKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNV 185
Query: 344 -TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
TY++++ C A +L A LL + + ++D L G + AK+I
Sbjct: 186 ITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQI 240
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 182/368 (49%), Gaps = 7/368 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ A C + + + M PDVVTY ++ G S L ++ LL EM
Sbjct: 258 ILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAAR 314
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + +Y S++ L G+ +A RV +DM+ + A F +++G C+ A
Sbjct: 315 GLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAA 374
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
F +QK G + VTY LI GLC+AG L+ A +L+E+ D G +A+TYT ++
Sbjct: 375 RNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDG 434
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + + M +K T + Y + K G + A + + +M + G++L+
Sbjct: 435 YCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELN 494
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I +YN+LIN CK G LE A + +M++ G + D YT+T +I LC++ + A L+
Sbjct: 495 IFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQ 554
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G + YN +++ G+++ + E M K ++ TY+S++ C K
Sbjct: 555 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEK 614
Query: 357 RLPSASKL 364
+ S +++
Sbjct: 615 NMKSTTEI 622
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 189/392 (48%), Gaps = 21/392 (5%)
Query: 10 VSFD------AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP 63
VSFD +L R+R+ GISP + N+++ L ++ L E+ E
Sbjct: 199 VSFDLLLLCLPSAPLLLRLRQYGISPSPESCNAVLCRLP----LDEAVQLFQELPEK--- 251
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
+ SYN L+ L G+ +A+++F +M P T+ IM++G C + A+++
Sbjct: 252 -NTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKL 307
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
+ G V Y +I LC G++ A +++++ G +A +TT+M R
Sbjct: 308 LSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCR 367
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
M+++G DG Y +I + G LKEA +++M G+ +D V+
Sbjct: 368 KGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVT 427
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
Y LI+ YCK GK+ A+L+ ++M ++ + T+T L DGLCK G++ A L M
Sbjct: 428 YTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMC 487
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLP 359
G + N+ YN +++ L K G ++ A+ M+ D +TY++++ LC++K L
Sbjct: 488 SKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELD 547
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
A LL L G++ +++G SG
Sbjct: 548 RAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSG 579
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 194/413 (46%), Gaps = 4/413 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ YC + +L+ M G+ + V Y S+IA +S ++ ++++M+
Sbjct: 290 IMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMH 349
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ D + ++M + G A F +M L T+ ++NGLC+ A
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+ + ++ G + VTY +LI G CK G++ A + ++ PN +TYT +
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ E+L M KG + F Y ++I K G L++A M M G++ D
Sbjct: 470 LCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +Y T+I C+ +L+ A+ LL EM +G + T+ +L++G C +G ++G + LE
Sbjct: 530 VYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
+M + N YN ++ + + + +++ M V + TY+ ++ CKA+
Sbjct: 590 WMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKAR 649
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+ A ++ G R+ S+ A++ L EA+++ K+R +++
Sbjct: 650 NMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLT 702
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 164/351 (46%), Gaps = 1/351 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ +C+ A + M++ G++ D VTY +LI G R L + +L EM + G
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG 420
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D +Y L+ ++GK EA V M+ +TP T+ + +GLCK A
Sbjct: 421 LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAAN 480
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G + TYN LI GLCKAG L A + ++ ++G P+ TYTTI+
Sbjct: 481 ELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGAL 540
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++++ +L M KG Y ++ F GR++ +E M+ + +
Sbjct: 541 CQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNT 600
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN+L+ YC E +++ + M Q ++ T+ ILI G CKA N+K A
Sbjct: 601 TTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSE 660
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
M + GF +YN ++ L K K A +FE M K+ T V+N
Sbjct: 661 MIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMR-KERLTAEPDVYNF 710
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 141/284 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID YC+ + + N+M + ++P+VVTY +L G + + + +LL EM
Sbjct: 430 VLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSK 489
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ ++++YNSL++ L + G ++A R DM L P T+ ++ LC+++ D A
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + G P +VTYN+L+ G C +GR+ + +L+ + + PN TY ++MK
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K EI M + + Y +I K +KEA + +M+ G +L
Sbjct: 610 YCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLT 669
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
SYN LI L K+ K A L ++M K+ + + ID
Sbjct: 670 ASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYID 713
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 147/285 (51%), Gaps = 11/285 (3%)
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
D A+++F+ L + +YNIL+K LC AGR++ A + E+ P+ +TY +
Sbjct: 239 DEAVQLFQELPEKN----TCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIM 291
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + + +++LS M +G + Y +VIA G++ +A +E MV GV
Sbjct: 292 VHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGV 351
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
LD + T+++ +C++G L AA DEM+K+G D T+T LI+GLC+AG +K A
Sbjct: 352 VLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAER 411
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 353
L+ M G D + Y ++D K GK+ A V M K + TY+++ LC
Sbjct: 412 VLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLC 471
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
K + +A++LL G+ + ++++GL +G +A +
Sbjct: 472 KQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMR 516
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 123/266 (46%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L D C+ A +L+ M G+ ++ TYNSLI G + L ++ + +M E G
Sbjct: 466 LSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAG 525
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV++Y +++ L Q + D A+ + Q+M+ + P T+N+++NG C + +
Sbjct: 526 LKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGK 585
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + + P TYN L+K C +++ I K + PN TY ++K
Sbjct: 586 RLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGH 645
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R K L S M KG+ Y +I K + EA E+M + + +
Sbjct: 646 CKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEP 705
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEM 267
YN I+L E LE+ L DE+
Sbjct: 706 DVYNFYIDLSFNEDNLESTLALCDEL 731
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 207/445 (46%), Gaps = 39/445 (8%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
I A + ++ M+ G+SP V YN +I G + + + L DEML+ +
Sbjct: 189 IQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRV 248
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P+ +YN+L+ ++G+ +EA + + M ++ P TFN +LNGLC+ + + A R
Sbjct: 249 APNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQR 308
Query: 123 MFRGLQKHGFVPELVTY-----------------------------------NILIKGLC 147
+ ++ +GFVP+ TY +IL+ LC
Sbjct: 309 VLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALC 368
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K G + A +LK+ ++G AP + + TI+ + + M+ G +
Sbjct: 369 KEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHV 428
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y +++ F ++ ++EA +++MV GV ++ +YNTLI+ Y + + + +L+EM
Sbjct: 429 TYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEM 488
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
EK+G + + ++ LI+ LCK NI A + L M G N + YN ++D GK+
Sbjct: 489 EKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKL 548
Query: 328 DHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
A F+ M ++ TY+ +++ LCK ++ A L + G+ ++
Sbjct: 549 KDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSL 608
Query: 384 VDGLRHSGCRREAKKIQSKIRMAKI 408
+ G +G ++A ++ ++ + I
Sbjct: 609 ISGYSSAGNVQKALELYETMKKSGI 633
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 192/406 (47%), Gaps = 9/406 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ + + I RM+ + P ++T+NSL+ G R ++ + +L+EM G
Sbjct: 258 LIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYG 317
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD ++Y +L + G D + + ++ + + T +I+LN LCK + A
Sbjct: 318 FVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAE 377
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + ++G P V +N ++ G C+ G + A ++++ G PN +TY +++K
Sbjct: 378 EVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKF 437
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + + M KG + Y T+I + + +E+M G++ ++
Sbjct: 438 CEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNV 497
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+SY LIN CK+ + A ++L +M +G + + +LIDG C AG +K A +
Sbjct: 498 ISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDE 557
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M L YN +++ L K GK+ A N+ + K D TY+S++ A
Sbjct: 558 MVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGN 617
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ A +L + KSG++ + ++ +GC +E + KI
Sbjct: 618 VQKALELYETMKKSGIKPTLNTYHRLI-----AGCGKEGLVLVEKI 658
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 183/379 (48%), Gaps = 4/379 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
++ + + + E+G+ PD Y I A + L +++L+ M G+ P V+ YN
Sbjct: 163 YEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNV 222
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
++ L + + +A ++F +M+ + P T+N +++G CK + A + ++
Sbjct: 223 VIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVEN 282
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
P ++T+N L+ GLC+A + A+ +L+E+ G P+ TYTT+ + +
Sbjct: 283 VEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASI 342
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+ RKG + ++ A K G +++A + +++ + +G+ V +NT++N Y
Sbjct: 343 TLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGY 402
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
C+ G + AY +++ME G + T+ L+ C+ N++ A ++ M + G N+
Sbjct: 403 CQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNV 462
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLS 367
E YN ++D G+ D + E ME K + +Y +++ LCK + A +L
Sbjct: 463 ETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGD 522
Query: 368 CLKSGVRILKSAQKAVVDG 386
+ GV ++DG
Sbjct: 523 MVHRGVVPNAQIYNMLIDG 541
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 179/404 (44%), Gaps = 32/404 (7%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ +C+ + + + +M E G+ P+V TYN+LI G R+ L +L+EM + G
Sbjct: 433 LVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKG 492
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V SY L++CL + EA + DM+ + P +N++++G C +A
Sbjct: 493 LKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAF 552
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R F + VP LVTYNILI GLCK G++ A + E+ G + + ITY +++
Sbjct: 553 RFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGY 612
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ LE+ MK+ G Y +IA K G + Y E + + V D
Sbjct: 613 SSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVP-DR 671
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V YN LI+ Y + G ++ A L ME QG + DK T+ LI G+ K R+H
Sbjct: 672 VIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLI-----LGHFKEGRMHK-- 724
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSA 361
V L D KI I E TY ++ CK K A
Sbjct: 725 ----------------VKNLVNDMKIRGLIPKTE--------TYDILIVGHCKLKDFDGA 760
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
++G S ++ GLR G +A I S++ M
Sbjct: 761 YVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMNM 804
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 166/354 (46%), Gaps = 40/354 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++A C+ + + +L + E G++P V +N+++ G + ++ + +++M +
Sbjct: 362 ILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAV 421
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ +YNSL+ ++ +EA + + M+ + P T+N +++G ++ D
Sbjct: 422 GLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRC 481
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ ++K G P +++Y LI LCK + A IL ++ G PNA Y ++
Sbjct: 482 FQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLID- 540
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
G C G+LK+A + ++MV +
Sbjct: 541 ---------------------------GSCIA-------GKLKDAFRFFDEMVAREIVPT 566
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YN LIN CK+GK+ A L E+ ++G D T+ LI G AGN++ A E
Sbjct: 567 LVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYE 626
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVH 350
M K G L Y+ ++ GK+G + +++ M V D Y++++H
Sbjct: 627 TMKKSGIKPTLNTYHRLIAGCGKEGLV-LVEKIYQEMLQMNLVPDRVIYNALIH 679
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 173/394 (43%), Gaps = 76/394 (19%)
Query: 37 LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 96
L++ + + ++S S +L M + G+ P V S N + L + ++ ++F +++
Sbjct: 118 LLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESG 177
Query: 97 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 156
L P + + K A+ + +++ G P + YN++I GLCK R++ A
Sbjct: 178 LRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAE 237
Query: 157 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 216
+ E+ D APN ITY T++ GYC
Sbjct: 238 KLFDEMLDRRVAPNRITYNTLID----------------------------GYC------ 263
Query: 217 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
K+G+L+EA + E+M + V+ I+++N+L+N C+ +E A +L+EME GF D+
Sbjct: 264 -KVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDR 322
Query: 277 YTHTILIDGLCKAGNI------------KGARLHLEY-----MNKIGFDSNLEA------ 313
+T+T L DG K GN+ KG ++ L+Y +N + + N+E
Sbjct: 323 FTYTTLFDGHLKCGNVDASITLSEEAVRKGVQI-LDYTCSILLNALCKEGNMEKAEEVLK 381
Query: 314 -------------YNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
+N IV+ + G I+ A E ME + TY+S+V C+ K
Sbjct: 382 KFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMK 441
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
+ A K + ++ GV ++DG S
Sbjct: 442 NMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRS 475
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 156/332 (46%), Gaps = 21/332 (6%)
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC-KNRYTD 118
M +P +S S ++ LF L TP F+ ML +C +++
Sbjct: 86 MLLPKSPFSSPSHLYTLFSLSS----------------TPMKPLFSDMLLSICSESKMVS 129
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
+ ++ ++K G +P + + N+ ++ L R + E+ +SG P+ Y +
Sbjct: 130 ESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAI 189
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ + K +E+++ MKR G + F Y VI K R+K+A ++M+ V
Sbjct: 190 QAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVA 249
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+ ++YNTLI+ YCK G+LE A+ + + M+ + E T L++GLC+A ++ A+
Sbjct: 250 PNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRV 309
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCK 354
LE M GF + Y + D K G +D +I + E K +T S +++ LCK
Sbjct: 310 LEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCK 369
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+ A ++L L++G+ + +V+G
Sbjct: 370 EGNMEKAEEVLKKFLENGLAPVGVFFNTIVNG 401
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 120/308 (38%), Gaps = 36/308 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLID C + + M I P +VTYN LI G + + + +L E+
Sbjct: 537 MLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRK 596
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ DV +YNSL+ G +A +++ M + P T++ ++ G C
Sbjct: 597 GLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG-CGKEGLVLV 655
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++++ + + VP+ V YN LI + G ++ A C
Sbjct: 656 EKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKA------------------------C 691
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
SAM+ +G D Y +I K GR+ + + + M G+
Sbjct: 692 SLH-----------SAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPK 740
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y+ LI +CK + AY+ EM + GF LI GL + G A +
Sbjct: 741 TETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICS 800
Query: 301 YMNKIGFD 308
MN G D
Sbjct: 801 EMNMKGKD 808
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 152/285 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV+YN+L+ G R L L ML
Sbjct: 130 ILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 189
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN +F +M+ L P + TF +++G CKN D A
Sbjct: 190 GVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLA 249
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + P+L+TYN LI GLCK G L+ A ++ E+ G P+ ITYTT++
Sbjct: 250 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDG 309
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C ++ E M ++ D Y +I+ + G +A + +M++ G++ D
Sbjct: 310 CCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVGLKPD 369
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y +IN +CK+G + LL EM++ G T+ +L++G
Sbjct: 370 ARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 157/309 (50%), Gaps = 2/309 (0%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ ++ + + + D + + G+ P V SYN+
Sbjct: 106 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNT 165
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M+ + P T+++++NGLCK D+A +F + G
Sbjct: 166 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKG 225
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP VT+ LI G CK GR+ A I K++ +P+ ITY T++ + K
Sbjct: 226 LVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAH 285
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
++ M KG D Y T+I K G L A ++ ++M+ + +LD V Y LI+
Sbjct: 286 HLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGL 345
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 310
C+EG A +L EM G + D T+T++I+ CK G++ KG++L L+ M + G +
Sbjct: 346 CREGXSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKL-LKEMQRDGHVPS 404
Query: 311 LEAYNCIVD 319
+ YN +++
Sbjct: 405 VVTYNVLMN 413
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 146/298 (48%), Gaps = 1/298 (0%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E+LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 114 EEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 173
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ + G P++ TY++LI GLCK ++ A + E+ G PN++T+
Sbjct: 174 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTF 233
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A +++M
Sbjct: 234 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSM 293
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CK+G L+ A+ M ++ D +T LI GLC+ G
Sbjct: 294 KGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVD 353
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
A L M +G + Y I++ K G + + + M+ +D S + +N+
Sbjct: 354 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ-RDGHVPSVVTYNV 410
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 129/272 (47%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y + + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 96 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWG 155
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ ++Y T+M R G + SAM G D + Y +I K ++ +A
Sbjct: 156 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDAN 215
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ + V++ TLI+ +CK G+++ A + +M Q D T+ LI GL
Sbjct: 216 ELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 275
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K A ++ M+ G + Y ++D KDG +D A + M + D
Sbjct: 276 CKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDD 335
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ A K+L L G++
Sbjct: 336 VVYTALISGLCREGXSVDAEKMLREMLSVGLK 367
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 138/301 (45%), Gaps = 4/301 (1%)
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
F+ ++ ++ + +A+ +R ++H F T +++ L K + +E+
Sbjct: 57 VFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEI 116
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
+ G+ + + +M ++ ++ + A+ + G Y T++ ++++G L
Sbjct: 117 LECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 176
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
E M+ GVQ D+ +Y+ LIN CKE K++ A L DEM +G + T T L
Sbjct: 177 DEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTL 236
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 340
IDG CK G + A + M +L YN ++ L K G + A ++ + M +K
Sbjct: 237 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGL 296
Query: 341 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
D TY++++ CK L +A + ++ R+ A++ GL G +A+K
Sbjct: 297 KPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEK 356
Query: 399 I 399
+
Sbjct: 357 M 357
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 200/439 (45%), Gaps = 31/439 (7%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ TI+ M+ G+SPD VTY L+ G + + LL EM+
Sbjct: 366 ILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRN 425
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+ ++ N L+H L+ +G+ EA + + M T T NI+++GLC + D A
Sbjct: 426 NCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKA 485
Query: 121 LRMFRGLQKHGF-----------------------VPELVTYNILIKGLCKAGRLRTARW 157
+ + +G++ HG +P+L+TY+ L+ GLCKAGR A+
Sbjct: 486 IEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKT 545
Query: 158 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 217
+ E+ P+++ Y + + K +L M++KG Y ++I
Sbjct: 546 LFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLG 605
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 277
++ E M++M G+ +I +YNT I C+ GK+E A LLDEM ++ + +
Sbjct: 606 IKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVF 665
Query: 278 THTILIDGLCKAGNIKGARLHLEYMNKI-GFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
+ LI CK + A+ E I G L Y+ + + L G++ A + E+
Sbjct: 666 SFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGL--YSLMFNELLAAGQLLKATELLEA 723
Query: 337 MEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 392
+ + +F Y +V +LCK L AS +L + G +A V+DGL G
Sbjct: 724 VLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGN 783
Query: 393 RREAKKIQSK-IRMAKISH 410
++EA K + MA +
Sbjct: 784 KKEANNFAEKMMEMASVGE 802
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 197/438 (44%), Gaps = 37/438 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI A C DA + + M E G P+ T+ L+ G + L L+LL+ M
Sbjct: 152 LLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESF 211
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ YN+++ + G+ D++ ++ + M L P TFN ++ LCK +A
Sbjct: 212 GVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDA 271
Query: 121 LRMFRGLQKHGFV----PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
R+F ++ ++ P +TYN+++KG CK G L A+ + + + ++ + +Y
Sbjct: 272 SRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNI 331
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ R+ K+ +L M KG + Y ++ K+G L +A + M +G
Sbjct: 332 WLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNG 391
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
V D V+Y L++ YC GK++AA LL EM + + YT IL+ L G I A
Sbjct: 392 VSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAE 451
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----------------- 339
L MN+ G+ + N IVD L G++D AI + + M V
Sbjct: 452 ELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLV 511
Query: 340 ----------KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
D TYS++++ LCKA R A L + ++ A + H
Sbjct: 512 DDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFI----H 567
Query: 390 SGCRREAKKIQSKIRMAK 407
C++ KI S R+ K
Sbjct: 568 HFCKQ--GKISSAFRVLK 583
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 196/466 (42%), Gaps = 101/466 (21%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ YC+ D G +LN M G+ P+ V YN++++ R S L+++M E
Sbjct: 187 ILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREE 246
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM----ICGDLTPCTATFNIMLNGLCKNRY 116
G+ PD+ ++NS + L + GK +A+R+F DM G P + T+N+ML G CK
Sbjct: 247 GLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGL 306
Query: 117 TDNALRMF-------------------RGLQKHG-FV---------------PELVTYNI 141
++A +F +GL +HG F+ P + +YNI
Sbjct: 307 LEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNI 366
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITY----------------TTIMKCCFRNR 185
L+ GLCK G L A+ I+ + +G +P+A+TY ++++ RN
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426
Query: 186 -------------------KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
+ E+L M KGY D ++ G L +A
Sbjct: 427 CLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486
Query: 227 DYMEQMVTDGVQL-----------------------DIVSYNTLINLYCKEGKLEAAYLL 263
+ ++ M G D+++Y+TL+N CK G+ A L
Sbjct: 487 EIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTL 546
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
EM + + D + I I CK G I A L+ M K G +LE YN ++ LG
Sbjct: 547 FAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGI 606
Query: 324 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
+I + + M K + TY++ + LC+ ++ A+ LL
Sbjct: 607 KNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLL 652
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 178/393 (45%), Gaps = 8/393 (2%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
R R P + YN L+ R + L +M+ GI P+ +++N L+ L
Sbjct: 102 RSRFPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSS 161
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
D A +F +M P TF I++ G CK TD L + ++ G +P V YN
Sbjct: 162 CVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYN 221
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
++ C+ GR + +++++ + G P+ +T+ + + + K I S M+
Sbjct: 222 TIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELD 281
Query: 201 GY----TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
Y + Y ++ F K+G L++A E + + + + SYN + + GK
Sbjct: 282 EYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGK 341
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
A +L +M +G Y++ IL+DGLCK G + A+ + M + G + Y C
Sbjct: 342 FIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGC 401
Query: 317 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++ GK+D A ++ + M + +++T + ++H+L R+ A +LL + G
Sbjct: 402 LLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKG 461
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
+ +VDGL SG +A +I +R+
Sbjct: 462 YGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRV 494
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 186/364 (51%), Gaps = 9/364 (2%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
++D ++ + M GI D+ +YN +I R S +L ++ +M++ G PDV + +
Sbjct: 84 NYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVS 143
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
SL++ Q + +A + M P +N +++G CK ++A+ +F +++
Sbjct: 144 SLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD 203
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G + VTYN L+ GLC +GR A +++++ PN IT+T ++ + K+
Sbjct: 204 GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEA 263
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+++ M R+ D F Y ++I GR+ EA ++ MVT G D+V+YNTLIN
Sbjct: 264 MKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLING 323
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+CK +++ L EM ++G D T+ +I G +AG A+ E +++ N
Sbjct: 324 FCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ---EIFSRMDSRPN 380
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL- 365
+ Y+ ++ L + +++ A+ +FE+M+ D TY+ ++H +CK + A L
Sbjct: 381 IRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFR 440
Query: 366 -LSC 368
LSC
Sbjct: 441 SLSC 444
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 161/326 (49%), Gaps = 6/326 (1%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
+E +F MI P F+ +L+ + K++ D + +F ++ G +L +YNI+
Sbjct: 51 EEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKG 201
I LC+ R A ++ ++ G+ P+ +T ++++ C NR + ++++S M+ G
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFD-AIDLVSKMEEMG 169
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ D Y T+I KIG + +A + ++M DGV+ D V+YN+L+ C G+ A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
L+ +M + + T T +ID K G A E M + D ++ YN +++ L
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
G++D A + + M K D TY+++++ CK+KR+ +KL + G+
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 378 SAQKAVVDGLRHSGCRREAKKIQSKI 403
++ G +G A++I S++
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRM 375
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C D +L+ M G PDVVTYN+LI G ++ + L EM + G
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM---------------IC------------ 94
+ D +YN+++ FQ G+PD A +F M +C
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLF 404
Query: 95 -----GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
++ T+NI+++G+CK ++A +FR L G P++V+Y +I G C+
Sbjct: 405 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 464
Query: 150 GRLRTARWILKELGDSGHAP 169
+ + + +++ + G P
Sbjct: 465 RQWDKSDLLYRKMQEDGLLP 484
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 90/221 (40%), Gaps = 39/221 (17%)
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
L+E D +M+ IV ++ +++ K + L ME G D Y++ I
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 282 LIDGLCK------AGNIKGARLHLEY-----------------------------MNKIG 306
+I+ LC+ A ++ G + Y M ++G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 362
F ++ YN I+D K G ++ A+ +F+ ME D+ TY+S+V LC + R A+
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 363 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+L+ + + AV+D G EA K+ ++
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270
>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 184/369 (49%), Gaps = 7/369 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L+ M G+ P+ TY + + G R + + + L + + G P + + +N+++H
Sbjct: 235 LLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFC 294
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
G+ +A VF M P +++I+++GLCK M + ++G P LV
Sbjct: 295 HDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLV 354
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
+Y+ L+ GLC+AGR+ A + K L D G + I Y+ ++ C ++ ++ ++ + M
Sbjct: 355 SYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDM 414
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ D + Y ++I A+ + +LKEA + E M+ DG+ ++V+ L++ + EG +
Sbjct: 415 VHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLI 474
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A+L LD++ + G + T+ ++I+GLCK M K G+ + Y+ I
Sbjct: 475 GEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSII 534
Query: 318 VDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+D K + A ++ M + + FTY+S+++ LC +LP L + G+
Sbjct: 535 IDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGL 594
Query: 374 ---RILKSA 379
RIL ++
Sbjct: 595 TPDRILYTS 603
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 155/336 (46%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ + + + R+++ G D + Y+ ++ G ++ L DL ++M+
Sbjct: 359 LLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHN 418
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD ++Y+SL++ + + EA VF+ MIC + P T I+++G A
Sbjct: 419 FVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAF 478
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ G VP L TY ++I GLCK + I ++ G+ P+ + Y+ I+
Sbjct: 479 LFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGF 538
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + M +G + F Y ++I +L E + M+ +G+ D
Sbjct: 539 VKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDR 598
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ Y +LI YCK ++AA + EME +G D + +T LI G K + GA+L +E
Sbjct: 599 ILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEE 658
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M G + Y ++ K G A+ ++ SM
Sbjct: 659 MMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSM 694
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 137/281 (48%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI AYC+ + M GI P+VVT L+ G + L+ + LD++ + G
Sbjct: 429 LIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFG 488
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++ +Y +++ L ++ KP++ +F DMI P T ++I+++G K A
Sbjct: 489 VVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAF 548
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R++ + G P + TY LI GLC +L + K + G P+ I YT+++ C
Sbjct: 549 RLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACY 608
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K LEI M+ +G + D F Y +I F K+ + A +ME+M+ G+ +
Sbjct: 609 CKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTV 668
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
V+Y LI Y K G + A ++ + M + G D IL
Sbjct: 669 VTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPDAKLSCIL 709
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 159/335 (47%), Gaps = 7/335 (2%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
CQ + + Y + N M PD Y+SLI R+ L +L++ + M+ GI P+V
Sbjct: 399 CQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNV 458
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
+ L+H G EA + + P T+ +++NGLCK ++ +F
Sbjct: 459 VTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFAD 518
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
+ K G+VP+ V Y+I+I G KA L+ A + ++ D G PN TYT+++ + K
Sbjct: 519 MIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDK 578
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
+ + M +G T D Y ++IA + K +K A + +M T+G+ D Y
Sbjct: 579 LPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTC 638
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
LI + K ++ A L ++EM +G T+T LI G K G+ K A + M + G
Sbjct: 639 LIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAG 698
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 341
+ + +CI+ LG DG + +S E KD
Sbjct: 699 IAPDAKL-SCILG-LGNDGD-----DFADSQEEKD 726
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 39/222 (17%)
Query: 209 YCTVIAAFVKIGRLKEA-TDYME--------------------------------QMVTD 235
Y TVI FV++ ++A Y+E M
Sbjct: 146 YATVIRVFVELSMFEDALVTYVEAKKVGVELQVCNFLLKGLVEGNQIMYVRSLFDDMKIS 205
Query: 236 GVQLDIVSYNTLINLYCKEGK--LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
G +I SY+ L+++Y K LE A LL EME +G + T+ + GLC+A +K
Sbjct: 206 GPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVK 265
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
A L+ + + G+ N +N ++ DG++ A+ VF+ M+ V D +YS +V
Sbjct: 266 SAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILV 325
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
LCK + + +L+ ++G+ + +++ GL +G
Sbjct: 326 DGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAG 367
>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
micromera]
Length = 431
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 149/285 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV+YN+L+ G R L L M
Sbjct: 147 ILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMXAS 206
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN +F +M+ L P TF +++G CKN D A
Sbjct: 207 GVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLA 266
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + +P+L+TYN LI GLCK G L+ A ++ E+ G P+ ITYTT++
Sbjct: 267 MEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLIDG 326
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + E M + D Y +I+ + GR +A + M++ G++ D
Sbjct: 327 CCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSVGLKPD 386
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y +IN +CK+G + LL EM++ G T+ +L++G
Sbjct: 387 AXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 156/309 (50%), Gaps = 2/309 (0%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ ++ + + + D + + G+ P V SYN+
Sbjct: 123 FKLVWGFYKEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNT 182
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M + P T+++++NGLCK D+A +F + G
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKG 242
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP VT+ LI G CK GR+ A I K++ P+ ITY ++ + K
Sbjct: 243 LVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQAN 302
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+++ M KG D Y T+I K G L A ++ +M+ + ++LD V+Y LI+
Sbjct: 303 DLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGL 362
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 310
C+EG+ A +L M G + D T+T++I+ CK G++ KG++L L+ M + G +
Sbjct: 363 CQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKL-LKEMQRDGHVPS 421
Query: 311 LEAYNCIVD 319
+ YN +++
Sbjct: 422 VVTYNVLMN 430
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 142/297 (47%), Gaps = 1/297 (0%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
E+LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 132 EILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLG 191
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D R+ + G P++ TY++LI GLCK ++ A + E+ G PN +T+T
Sbjct: 192 DLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFT 251
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T++ +N + L +EI M + D Y +I K G LK+A D + +M
Sbjct: 252 TLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMK 311
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G++ D ++Y TLI+ CKEG L+ A+ M ++ D +T LI GLC+ G A
Sbjct: 312 GLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDA 371
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
L M +G + Y I++ K G + + + M+ +D S + +N+
Sbjct: 372 EKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQ-RDGHVPSVVTYNV 427
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 128/272 (47%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y ++ + + G+ L +NIL+ CK G +R A + + G
Sbjct: 113 VLEHLMKLKYFKLVWGFYKEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWG 172
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ ++Y T+M R G + SAM G D + Y +I K ++ +A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDAN 232
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ + V++ TLI+ +CK G+++ A + +M Q D T+ LI GL
Sbjct: 233 ELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGL 292
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID----HAINVFESMEVKDS 342
CK G++K A + M+ G + Y ++D K+G +B H + E D
Sbjct: 293 CKKGDLKQANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDD 352
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 353 VAYTALISGLCQEGRXVDAEKMLRXMLSVGLK 384
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 138/301 (45%), Gaps = 4/301 (1%)
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
F+ ++ ++ + +A+ +R ++H F T +++ L K + KE+
Sbjct: 74 VFSGLIXAYLESGFLRDAIECYRLTREHKFXXPFDTCRKVLEHLMKLKYFKLVWGFYKEI 133
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
+ G+ + + +M ++ ++ + A+ + G Y T++ ++++G L
Sbjct: 134 LECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 193
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
E M GVQ D+ +Y+ LIN CKE K++ A L DEM +G + T T L
Sbjct: 194 DEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTL 253
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 340
IDG CK G + A + M +L YN ++ L K G + A ++ M +K
Sbjct: 254 IDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGL 313
Query: 341 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
D TY++++ CK L +A + ++ +R+ A A++ GL G +A+K
Sbjct: 314 KPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEK 373
Query: 399 I 399
+
Sbjct: 374 M 374
>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g31840
gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 840
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 181/369 (49%), Gaps = 4/369 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI CQ + + ++ + G+ P +VTY+SLI G + L L ++M++M
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PPDV Y L+ L + G A R M+ + FN +++G C+ D A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L++FR + +G P++ T+ +++ GRL A ++ + G P+A+ Y T++
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA 575
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K +GL++ M+R + D VI K R+++A+ + ++ ++ D
Sbjct: 576 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 635
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+YNT+I YC +L+ A + + ++ F + T TILI LCK ++ GA
Sbjct: 636 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFS 695
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + G N Y C++D K I+ + +FE M+ K +YS ++ LCK
Sbjct: 696 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 755
Query: 357 RLPSASKLL 365
R+ A+ +
Sbjct: 756 RVDEATNIF 764
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 170/368 (46%), Gaps = 4/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C+ D + + M + GI PD++ Y++LI G + +L L + L G
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ DV ++S + + G A+ V++ M+C ++P T+ I++ GLC++ A
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M+ + K G P +VTY+ LI G CK G LR+ + +++ G+ P+ + Y ++
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + M + + + ++I + ++ R EA M G++ D+
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV 531
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++ T++ + EG+LE A L M K G E D + LID CK +
Sbjct: 532 ATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDL 591
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAI----NVFESMEVKDSFTYSSMVHNLCKAKR 357
M + +++ N ++ L K +I+ A N+ E D TY++M+ C +R
Sbjct: 592 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 651
Query: 358 LPSASKLL 365
L A ++
Sbjct: 652 LDEAERIF 659
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 139/309 (44%), Gaps = 35/309 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ FD + M GI PDV T+ +++ + L +L L M +MG
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMG 561
Query: 62 IPPDVWSY-----------------------------------NSLMHCLFQLGKPDEAN 86
+ PD +Y N ++H LF+ + ++A+
Sbjct: 562 LEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDAS 621
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ F ++I G + P T+N M+ G C R D A R+F L+ F P VT ILI L
Sbjct: 622 KFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 681
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK + A + + + G PNA+TY +M ++ + ++ M+ KG +
Sbjct: 682 CKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSI 741
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I K GR+ EAT+ Q + + D+V+Y LI YCK G+L A LL +
Sbjct: 742 VSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEH 801
Query: 267 MEKQGFECD 275
M + G + D
Sbjct: 802 MLRNGVKPD 810
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 172/379 (45%), Gaps = 14/379 (3%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLM 73
+ +L +R+ + DV + L+ R ++ +L++ ++G IP D S ++
Sbjct: 133 FNVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQD--SVYRML 188
Query: 74 HCLFQLGKPDEANRVFQDMICGDLTPC-TATFNIMLNGL-CKNRYTDNALRMFRGLQKHG 131
+ L + D F + G + P + +L+ L CK T AL R + + G
Sbjct: 189 NSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVT-KALDFHRLVMERG 247
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
F +V+ N ++KGL ++ A +L + D G APN +T+ T++ + +
Sbjct: 248 FRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAF 306
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
++ M+++G D Y T+I + K G L Q + GV+LD+V +++ I++Y
Sbjct: 307 DLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVY 366
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
K G L A ++ M QG + T+TILI GLC+ G I A + K G + ++
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
Y+ ++D K G + ++E M D Y +V L K + A + +
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK 486
Query: 368 CLKSGVRILKSAQKAVVDG 386
L +R+ +++DG
Sbjct: 487 MLGQSIRLNVVVFNSLIDG 505
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 156/392 (39%), Gaps = 61/392 (15%)
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI----------------MLNGL 111
S+ ++ H L + G D A++VF +MI T FN+ ++
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEMI----TNRGKDFNVLGSIRDRSLDADVCKFLMECC 156
Query: 112 CKNRYTDNALRMFRGLQKHGFV-PELVTYNIL---------------IKGLCKAG----R 151
C+ D AL +F + G V P+ Y +L LC+ G
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSG 216
Query: 152 LRTARWILKELGDSGHAPNAITY-TTIMKCCFR------NRKYK--------LGLEILSA 196
+ ++L L G A+ + +M+ FR N+ K + +LS
Sbjct: 217 VSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSL 276
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
+ G + +CT+I F K G + A D + M G++ D+++Y+TLI+ Y K G
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
L + L + +G + D + ID K+G++ A + + M G N+ Y
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 317 IVDRLGKDGKIDHAINVF-----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++ L +DG+I A ++ ME TYSS++ CK L S L +K
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGME-PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 372 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
G +VDGL G A + K+
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM 487
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ D + + M E G P+ VTY L+ +++ + S L +EM E
Sbjct: 676 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 735
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P + SY+ ++ L + G+ DEA +F I L P + I++ G CK A
Sbjct: 736 GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 795
Query: 121 LRMFRGLQKHGFVPE 135
++ + ++G P+
Sbjct: 796 ALLYEHMLRNGVKPD 810
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 177/376 (47%), Gaps = 5/376 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ F L +M G+ PD TYN+LIAG + ++ + ++ + + G
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD ++Y SL+ L G+ + A +F + + + P +N ++ GL A
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + + G +PE+ T+NIL+ GLCK G + A ++K + G+ P+ T+ ++
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY 471
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K + LEIL M G D + Y +++ K + ++ + + MV G ++
Sbjct: 472 STQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNL 531
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++N L+ C+ KL+ A LL+EM+ + D T LIDG CK G++ GA
Sbjct: 532 FTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591
Query: 302 MNKI-GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + S+ YN I+ + + A +F+ M + D +TY MV CK
Sbjct: 592 MEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTG 651
Query: 357 RLPSASKLLLSCLKSG 372
+ K LL +++G
Sbjct: 652 NVNLGYKFLLEMMENG 667
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 187/397 (47%), Gaps = 6/397 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C + + N GI P+V+ YN+LI G + ++ + L +EM E G
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 421
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V ++N L++ L ++G +A+ + + MI P TFNI+++G +NAL
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +G P++ TYN L+ GLCK + K + + G APN T+ +++
Sbjct: 482 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLD 240
R RK L +L MK K D + T+I F K G L A +M V
Sbjct: 542 CRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSS 601
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK-GARLHL 299
+YN +I+ + ++ + A L EM + D YT+ +++DG CK GN+ G + L
Sbjct: 602 TPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLL 661
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA-KRL 358
E M GF +L +++ L + ++ A + M K V+ +C K+
Sbjct: 662 EMMEN-GFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKG--LVPEAVNTICDVDKKE 718
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
+A KL+L L I A + + DGLR R++
Sbjct: 719 VAAPKLVLEDLLKKSCITYYAYELLFDGLRDKRLRKK 755
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 183/380 (48%), Gaps = 4/380 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
FD + + RMR+ GI+PDV ++ + + S +L LL+ M G +V +Y +
Sbjct: 127 FDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCT 186
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
++ ++ E +F M+ ++ C +TFN +L LCK ++ + K G
Sbjct: 187 VVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRG 246
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
+P L TYN+ I+GLC+ G L A ++ L + G P+ ITY ++ +N K++
Sbjct: 247 VLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAE 306
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
L M +G D + Y T+IA + K G ++ A + V +G D +Y +LI+
Sbjct: 307 VYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGL 366
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
C EG+ A L +E +G + + + LI GL G I A M++ G +
Sbjct: 367 CHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEV 426
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLS 367
+ +N +V+ L K G + A + + M K D FT++ ++H ++ +A ++L
Sbjct: 427 QTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDV 486
Query: 368 CLKSGVRILKSAQKAVVDGL 387
L +GV ++++GL
Sbjct: 487 MLDNGVDPDVYTYNSLLNGL 506
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 180/374 (48%), Gaps = 4/374 (1%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
+ ++C+ A +LN M G +VV Y +++ G + + +L +ML G+
Sbjct: 153 MKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGV 212
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
+ ++N L+ L + G E ++ +I + P T+N+ + GLC+ D A+R
Sbjct: 213 SLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVR 272
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
M L + G P+++TYN LI GLCK + + A L ++ + G P++ TY T++
Sbjct: 273 MVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYC 332
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ +L I+ G+ D F Y ++I G A + + G++ +++
Sbjct: 333 KGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
YNTLI +G + A L +EM ++G + T IL++GLCK G + A ++ M
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRL 358
G+ ++ +N ++ K+++A+ + + M D +TY+S+++ LCK +
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKF 512
Query: 359 PSASKLLLSCLKSG 372
+ + ++ G
Sbjct: 513 EDVMETYKTMVEKG 526
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 171/396 (43%), Gaps = 14/396 (3%)
Query: 18 ILNRMR-EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE-MGIPPDVWSYNSLMHC 75
+ N MR E G + TY S+I ++L +M E +G Y M
Sbjct: 26 MFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKN 85
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
+ GK EA VF+ M D P ++N +++ L + Y D A +++ ++ G P+
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
+ ++ I +K CK R A +L + G N + Y T++ + G E+
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M G + + ++ K G +KE +++++ GV ++ +YN I C+ G
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
+L+ A ++ + +QG + D T+ LI GLCK + A ++L M G + + YN
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 316 CIVDRLGKDGKI--------DHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
++ K G + D N F V D FTY S++ LC A L
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGF----VPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L G++ ++ GL + G EA ++ +++
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+++ C++ D +L M+ ++PD VT+ +LI G +N L + L +M E
Sbjct: 536 ILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEA 595
Query: 61 -GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ +YN ++H + A ++FQ+M+ L P T+ +M++G CK +
Sbjct: 596 YKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNL 655
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
+ + ++GF+P L T +I LC R+ A I+ + G P A+
Sbjct: 656 GYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
>gi|388490582|gb|AFK33357.1| unknown [Medicago truncatula]
Length = 389
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 183/360 (50%), Gaps = 5/360 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
IL+R+ + G+ P+VVTY+ LI A + + ++ LLD+++ G P++ SYN L+ L
Sbjct: 11 ILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSYNVLLTGLC 70
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G+ ++A ++F+++ PC + NI+L LC D A + G+ + G P +V
Sbjct: 71 KEGRTEDAIKLFKELPEKGFKPCVVSHNILLRSLCYEGRWDEAYELMAGMDRDGQAPSVV 130
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN+LI L GR+ A +L E+ SG +A +Y I+ + + L ++ L M
Sbjct: 131 TYNVLITSLSIDGRIEQAFKVLDEMTKSGFKVSANSYNPIIARLCKEGRVDLVVQCLDQM 190
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ + +G G IA + G +KEA +E++ Y +I L C++G
Sbjct: 191 INRRFHLNG-GTYNAIALLCERGMVKEAFLILERLGKKQNYPISDFYKNVITLLCRKGST 249
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A+ +L EM GF D YT++ LI G+C+ G + A + + G+ +++ YN +
Sbjct: 250 YPAFQILYEMTVHGFTPDSYTYSSLIRGMCREGMLDEALQIFGILEEHGYVPHVDNYNAL 309
Query: 318 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ L K +ID +I +F+ M K + TY+ V L + + A+ LL GV
Sbjct: 310 ILGLCKSQRIDMSIEIFQMMVNKGCMPNEMTYNIFVEALAFEEEMELAATLLNELYLKGV 369
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 142/290 (48%), Gaps = 5/290 (1%)
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
GK +++ ++ +I L P T++I++ K R D A+++ + G P LV+Y
Sbjct: 3 GKLNQSMQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSY 62
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
N+L+ GLCK GR A + KEL + G P +++ +++ ++ E+++ M R
Sbjct: 63 NVLLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNILLRSLCYEGRWDEAYELMAGMDR 122
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
G Y +I + GR+++A +++M G ++ SYN +I CKEG+++
Sbjct: 123 DGQAPSVVTYNVLITSLSIDGRIEQAFKVLDEMTKSGFKVSANSYNPIIARLCKEGRVDL 182
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
LD+M + F + T+ I LC+ G +K A L LE + K + Y ++
Sbjct: 183 VVQCLDQMINRRFHLNGGTYNA-IALLCERGMVKEAFLILERLGKKQNYPISDFYKNVIT 241
Query: 320 RLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 365
L + G A + M V DS+TYSS++ +C+ L A ++
Sbjct: 242 LLCRKGSTYPAFQILYEMTVHGFTPDSYTYSSLIRGMCREGMLDEALQIF 291
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 88/206 (42%), Gaps = 31/206 (15%)
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
K ++IL + +KG + Y +I A K + EA ++ ++ G + ++VSYN
Sbjct: 4 KLNQSMQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSYN 63
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
L+ CKEG+ E A L E+ ++GF+ +H IL+ LC G A + M++
Sbjct: 64 VLLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNILLRSLCYEGRWDEAYELMAGMDRD 123
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 365
G ++ YN ++ L DG+I+ A K+L
Sbjct: 124 GQAPSVVTYNVLITSLSIDGRIEQAF-------------------------------KVL 152
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSG 391
KSG ++ ++ ++ L G
Sbjct: 153 DEMTKSGFKVSANSYNPIIARLCKEG 178
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 182/371 (49%), Gaps = 6/371 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID YC+ G +L M G+ DV Y+SLI+ + +L DEML
Sbjct: 190 VLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRR 249
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P+V +Y+ LM L + G+ EA+ + +DM + P + ++ +GLCKN +A
Sbjct: 250 KVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDA 309
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + + G P +TYN+++ GLCK R+ A +++ + G P+A+TY T++K
Sbjct: 310 IKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKG 369
Query: 181 CFRNRKYKLGLEILSAMKRKGYTF--DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
K +++ + + + D F +I K GR+ +A MV G+Q
Sbjct: 370 LCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQ 429
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+IV+YN LI Y KL A L + GF + T++++I+GLCK + AR
Sbjct: 430 GNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGL 489
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCK 354
M G + YN ++ L ++ ++ A ++F+ M D +++ ++ K
Sbjct: 490 FCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLK 549
Query: 355 AKRLPSASKLL 365
A + SA +LL
Sbjct: 550 AGDVKSAKELL 560
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 166/373 (44%), Gaps = 37/373 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI A+C + G + + M +SP+VVTY+ L+ G R + ++L +M G
Sbjct: 226 LISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARG 285
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +Y L L + G+ +A +V M+ P T T+N+++NGLCK D+A
Sbjct: 286 VRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAF 345
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLC---------------------------------- 147
+ + K G P+ VTYN L+KGLC
Sbjct: 346 GVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQ 405
Query: 148 ---KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
K GR+ A I + + G N +TY +++ RK L++ G++
Sbjct: 406 GLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSP 465
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ Y +I K+ L A +M G++ ++ YN L+ C+E LE A L
Sbjct: 466 NSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLF 525
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
EM D + I+IDG KAG++K A+ L M + + ++ +++R K
Sbjct: 526 QEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKL 585
Query: 325 GKIDHAINVFESM 337
G +D A+ ++E M
Sbjct: 586 GMLDEAMGLYEKM 598
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 190/384 (49%), Gaps = 13/384 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID + +DA ++ ++M A + P + ++L S + +L M + G
Sbjct: 48 LIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRG 107
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI----CGDLTPCTATFNIMLNGLCKNRYT 117
+V++ N ++ + G+ D+A +F M C + P T+N ++NG CK +
Sbjct: 108 FGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDC--VVPDCVTYNTLVNGFCKAKRL 165
Query: 118 DNALRMFRGLQKHGFV-PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
A +F ++K G P LVTY++LI CK+G + +L+E+ G + Y++
Sbjct: 166 AEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSS 225
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ + G E+ M R+ + + Y ++ + GR +EA++ ++ M G
Sbjct: 226 LISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARG 285
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
V+ D+V+Y L + CK G+ A +LD M ++G E T+ ++++GLCK + A
Sbjct: 286 VRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAF 345
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF-----ESMEVK-DSFTYSSMVH 350
+E M K G + YN ++ L GKI A++++ E VK D FT ++++
Sbjct: 346 GVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQ 405
Query: 351 NLCKAKRLPSASKLLLSCLKSGVR 374
LCK R+ A+++ S ++ G++
Sbjct: 406 GLCKEGRVHDAARIHSSMVEMGLQ 429
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 196/414 (47%), Gaps = 11/414 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREA--GISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
+++ +C+ D ++ ++M+ + PD VTYN+L+ G + L+ + L + M
Sbjct: 117 LVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMK 176
Query: 59 EMG-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
+ G P++ +Y+ L+ C + G+ E + ++M L ++ +++ C
Sbjct: 177 KGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDI 236
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
+ +F + + P +VTY+ L++GL + GR R A +LK++ G P+ + YT +
Sbjct: 237 ETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVL 296
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+N + +++L M +KG Y V+ K R+ +A +E MV G
Sbjct: 297 ADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGK 356
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHTILIDGLCKAGNIK-G 294
+ D V+YNTL+ C GK+ A L + + F D +T LI GLCK G +
Sbjct: 357 KPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDA 416
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVH 350
AR+H M ++G N+ YN +++ K+ A+ ++ ES +S TYS M++
Sbjct: 417 ARIH-SSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMIN 475
Query: 351 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
LCK + L A L SG+R A++ L +A+ + ++R
Sbjct: 476 GLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMR 529
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 156/350 (44%), Gaps = 45/350 (12%)
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
PP + ++L+ L + + D V+ M+ + P + + + + A
Sbjct: 39 PPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFS 98
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAG-------------------------------- 150
+ + K GF + N+++KG C++G
Sbjct: 99 VLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNG 158
Query: 151 -----RLRTARWILKELGDSGHA-PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
RL AR + + + G PN +TY+ ++ C ++ + GL +L M+R+G
Sbjct: 159 FCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKA 218
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D F Y ++I+AF G ++ + ++M+ V ++V+Y+ L+ + G+ A +L
Sbjct: 219 DVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEML 278
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+M +G D +T+L DGLCK G A L+ M + G + YN +V+ L K+
Sbjct: 279 KDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKE 338
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS---KLLLS 367
++D A V E M K D+ TY++++ LC A ++ A KLLLS
Sbjct: 339 DRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLS 388
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 128/257 (49%), Gaps = 1/257 (0%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
+ PDV T N+LI G + + + + M+EMG+ ++ +YN L+ K EA
Sbjct: 393 VKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEAL 452
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
++++ + +P + T+++M+NGLCK + A +F ++ G P ++ YN L+ L
Sbjct: 453 KLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSL 512
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C+ L AR + +E+ + H + +++ I+ + K E+LS M D
Sbjct: 513 CREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDA 572
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ +I F K+G L EA E+MV+ G +V +++L+ Y +G+ E LL +
Sbjct: 573 VTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQ 632
Query: 267 MEKQGFECD-KYTHTIL 282
M + D K T TIL
Sbjct: 633 MADKDVVLDSKLTSTIL 649
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 192/383 (50%), Gaps = 13/383 (3%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P+ T++ LIAG + L +++ ++MLE P++ N L+ L Q G D+A +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH-GFVPELVTYNILIKGLC 147
F+ + C +P T NI++NG C+ + D AL +F ++K+ VPE TY +IK C
Sbjct: 61 FRGIQC---SPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM-KRKGYTFDG 206
K RL AR +L+E S + + I T++ + + ++ ++L M ++K D
Sbjct: 118 KMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ +I F K GR++EA + +E +V+ G + V+Y TLI+ +CK G L A L
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKV 235
Query: 267 MEKQGF--ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+ + E + T LI GLCKA ++ A ++ M ++ Y ++D L K
Sbjct: 236 LSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQ 295
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
G+ VFE M + TY+++VH CKA L A +++ S + G+ +
Sbjct: 296 GRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTY 355
Query: 381 KAVVDGLRHSGCRREAKKIQSKI 403
+++GL +G R A + KI
Sbjct: 356 TVLLEGLFENGKVRTATEFFEKI 378
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 187/373 (50%), Gaps = 17/373 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE- 59
+L+ + CQ + D I R SP V+T N LI G LL +L+L EM +
Sbjct: 43 LLLASLCQAGTMDQAMAIF---RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKN 99
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC--GDLTPCTATFNIMLNGLCKNRYT 117
+ P+ +Y +++ C ++ + D+A ++ ++ C D+ T+ + G CK +
Sbjct: 100 FALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSSDVIAITS----VARGFCKAQRV 155
Query: 118 DNALRMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
D A ++ + +K P++V +N++I G CKAGR+R A +L+ L G PNA+TYTT
Sbjct: 156 DEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTT 215
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDG--FGYCTVIAAFVKIGRLKEATDYMEQMVT 234
++ ++ L++ + + + + + +I+ K RL+ A + ++QM
Sbjct: 216 LIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKA 275
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
++ D +Y TL++ CK+G+ + +EM ++G T+T L+ CKAG+++
Sbjct: 276 RDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQD 335
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVH 350
A+ + M G ++ Y +++ L ++GK+ A FE + + + YS++V
Sbjct: 336 AQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVR 395
Query: 351 NLCKAKRLPSASK 363
CKA + A K
Sbjct: 396 GCCKAALVDEAVK 408
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 139/288 (48%), Gaps = 3/288 (1%)
Query: 6 YCQFVSFDAGYTILNRMREA-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP 64
+C+ D Y +L M E PD+V +N +I G + + + ++L+ ++ MG P
Sbjct: 149 FCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVP 208
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGD--LTPCTATFNIMLNGLCKNRYTDNALR 122
+ +Y +L+ + G EA ++F+ + D P TFN +++GLCK ++A
Sbjct: 209 NAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFE 268
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ + ++ + TY L+ GLCK GR + +E+ G P+ +TYTT++
Sbjct: 269 LVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHC 328
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ + +++ +M KG D Y ++ + G+++ AT++ E+++ + V
Sbjct: 329 KAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAV 388
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
Y+ L+ CK ++ A EM + D T +L++ LCK G
Sbjct: 389 VYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRG 436
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+ + M G +P VVTY +L+ + L + ++ M+ G
Sbjct: 288 LMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKG 347
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
IPPDV +Y L+ LF+ GK A F+ ++ PC ++ ++ G CK D A+
Sbjct: 348 IPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAV 407
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
+ + + P+ T +L++ LCK GR
Sbjct: 408 KYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + + ++ +M+ + D TY +L+ G + S + +EML G
Sbjct: 253 LISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREG 312
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y +L+H + G +A +V + M+ + P T+ ++L GL +N A
Sbjct: 313 CNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTAT 372
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
F + + P V Y+ L++G CKA + A E+ D AP+ T
Sbjct: 373 EFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPAT 424
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A+C+ S ++ M GI PDV TY L+ G N + + + +++L
Sbjct: 323 LVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRER 382
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
PP Y++L+ + DEA + + +M+ L P AT +++ LCK TD
Sbjct: 383 CPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439
>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 418
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 141/284 (49%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E LE G P ++ +N LMH + G+ A VF + L P +FN ++NG K
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ +Q G P++ TY++LI GLCK ++ A + E+ D+G PN +T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A D ++M
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG LE A+ M K+ D +T LI GLC+ G
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K G + + + M+
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 139/256 (54%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + + + G+ P VV++N+L+ G + L L + M G+ PDV++Y+ L++ L
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ K D+AN +F +M+ L P TF +++G CKN D A+ ++ + P+L
Sbjct: 217 CKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDL 276
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+TYN LI GLCK G L+ A+ + E+ G P+ ITYTT++ + + E
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKR 336
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M ++ D Y +I+ + GR +A + +M++ G++ +I +Y +IN +CK+G
Sbjct: 337 MIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396
Query: 257 LEAAYLLLDEMEKQGF 272
+ LL EM++ G+
Sbjct: 397 VWTGSKLLKEMQRDGY 412
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 145/284 (51%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + G+ P V S+N+LM+ +LG D
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLD 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M + P T+++++NGLCK D+A +F + +G VP VT+ LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I ++ +P+ ITY T++ + K ++ M KG
Sbjct: 249 DGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A +Y ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
L EM G + + T+T++I+ CK G++ L+ M + G+
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 123/271 (45%), Gaps = 31/271 (11%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
FNI+++ K A +F + K G P +V++N L+ G K G L + +
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
SG P+ TY+ ++ + K E+ M G +G + T+I K GR+
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A + QM++ + D+++YNTLI CK+G L+ A L DEM +G + DK T+T LI
Sbjct: 259 LAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLI 318
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF 343
DG CK G+++ A EY ++ I I + D
Sbjct: 319 DGSCKEGDLETA---FEYRKRM---------------------IKENIRL-------DXV 347
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 348 AYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 136/300 (45%), Gaps = 4/300 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F+ ++ ++ + +A+ +R ++H F T +I+ L K + +E
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESL 128
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+ G+ + + +M + + +L + A+ + G + T++ ++K+G L
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLD 188
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
E M GVQ D+ +Y+ LIN CKE K++ A L DEM G + T T LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
DG CK G + A M +L YN ++ L K G + A ++ + M +K
Sbjct: 249 DGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLK 308
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D TY++++ CK L +A + +K +R+ A A++ GL G +A+K+
Sbjct: 309 PDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKM 368
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 100/202 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ D + + M + G+ P+ VT+ +LI G +N + ++++ +ML
Sbjct: 211 VLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQ 270
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+ +YN+L++ L + G +A + +M L P T+ +++G CK + A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETA 330
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K + V Y LI GLC+ GR A +L+E+ G P TYT I+
Sbjct: 331 FEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 181 CFRNRKYKLGLEILSAMKRKGY 202
+ G ++L M+R GY
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGY 412
>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
Length = 1147
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 183/393 (46%), Gaps = 44/393 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC+ FD + + + M AGI P TYN I + + +LL M
Sbjct: 350 LIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSM---- 405
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV SYN+LMH ++ K EA+ +F D+ G++ P T+N +++GLC++ + A
Sbjct: 406 AAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQ 465
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + P+++TY L+KG K G L A I E+ G P+ YTT
Sbjct: 466 RLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGE 525
Query: 182 FR----NRKYKL--------------------------------GLEILSAMKRKGYTFD 205
R + ++L +E + R G D
Sbjct: 526 LRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPD 585
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y TVI +++ GR K A D ++M++ + +++Y LI+ + K G+LE A+
Sbjct: 586 HVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYST 645
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM+K+G + TH L+ G+CKAGNI A +L M + G N +Y ++ +
Sbjct: 646 EMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLD 705
Query: 326 KIDHAINVFESM---EVK-DSFTYSSMVHNLCK 354
K + + +++ M E++ D +T+ ++ +L K
Sbjct: 706 KWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 738
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 177/378 (46%), Gaps = 9/378 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ + + + M+ +G ++N LI G + L + + DEML
Sbjct: 314 ILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNA 373
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P +YN + L + G+ D+A + M D+ ++N +++G K R A
Sbjct: 374 GIYPTTSTYNIYIRALCEFGRIDDARELLSSMAAPDV----VSYNTLMHGYIKMRKFVEA 429
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F L+ P +VTYN LI GLC++G L A+ + +E+ P+ ITYTT++K
Sbjct: 430 SLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKG 489
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT-DGVQL 239
+N + EI M RKG DG+ Y T +++G ++A E+MV D
Sbjct: 490 FVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAP 549
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+ YN I+ CK G LE A ++ + G D T+T +I G + G K AR
Sbjct: 550 DLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLY 609
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ M ++ Y ++ K G+++ A M+ + + T+++++H +CKA
Sbjct: 610 DEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKA 669
Query: 356 KRLPSASKLLLSCLKSGV 373
+ A + L + G+
Sbjct: 670 GNIDEAYRYLCKMEEEGI 687
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 176/396 (44%), Gaps = 9/396 (2%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
+M G P V N ++ + +++ + ++ + M+ GI P V ++N+++ F+
Sbjct: 227 FEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFK 286
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
G + ++++ +M ++ T+NI++NG K+ + A R +Q+ GF +
Sbjct: 287 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYS 346
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
+N LI+G CK G A + E+ ++G P TY ++ + E+LS+M
Sbjct: 347 FNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMA 406
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
D Y T++ ++K+ + EA+ + + + IV+YNTLI+ C+ G LE
Sbjct: 407 AP----DVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLE 462
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A L +EM Q D T+T L+ G K GN+ A + M + G + AY
Sbjct: 463 GAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRT 522
Query: 319 DRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ G + A + E M +D Y+ + LCK L A + + G+
Sbjct: 523 VGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGL 582
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
V+ G G + A+ + ++ ++S
Sbjct: 583 VPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLS 618
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 141/310 (45%), Gaps = 8/310 (2%)
Query: 42 TRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 101
T+ S+ L ++M+ G P V + N ++ L ++A V++ M+ + P
Sbjct: 215 TKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTV 274
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
TFN ML+ K + +++ +++ VTYNILI G K+G++ AR +
Sbjct: 275 ITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGD 334
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ SG ++ +++ + + + M G Y I A + GR
Sbjct: 335 MQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGR 394
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
+ +A + + M D+VSYNTL++ Y K K A LL D+++ T+
Sbjct: 395 IDDARELLSSMAAP----DVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNT 450
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 340
LIDGLC++GN++GA+ E M ++ Y ++ K+G + A +++ M K
Sbjct: 451 LIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKG 510
Query: 341 ---DSFTYSS 347
D + Y++
Sbjct: 511 IKPDGYAYTT 520
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 119/256 (46%), Gaps = 8/256 (3%)
Query: 113 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
K + L F + + GF+P + NI+++ L + + A+ + + + G P I
Sbjct: 216 KKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVI 275
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
T+ T++ CF+ + +I MKR+ F Y +I F K G+++EA + M
Sbjct: 276 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDM 335
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
G + S+N LI YCK+G + A+ + DEM G T+ I I LC+ G I
Sbjct: 336 QRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRI 395
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSM 348
AR L M ++ +YN ++ K K A +F+ ++ + TY+++
Sbjct: 396 DDARELLSSMAA----PDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTL 451
Query: 349 VHNLCKAKRLPSASKL 364
+ LC++ L A +L
Sbjct: 452 IDGLCESGNLEGAQRL 467
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + + + + M++ G+ P+V+T+N+L+ G + + + L +M E
Sbjct: 626 VLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEE 685
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
GI P+ +SY L+ HC L K +E +++++M+ ++ P T + L K+
Sbjct: 686 GISPNKYSYTILISKHC--DLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 739
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 181/363 (49%), Gaps = 11/363 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ +C+ + + + + + + P VV++N+LI G + L L +M +
Sbjct: 245 ILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKS 304
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV++Y++L++ L + K D A+ +F +M L P F +++G +N D
Sbjct: 305 RTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLM 364
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G P++V YN L+ G CK G L AR I+ + G P+ ITYTT++
Sbjct: 365 KESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDG 424
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + LEI M + G D G+ ++ K GR+ +A + +M+ G++ D
Sbjct: 425 FCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPD 484
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+Y +++ +CK+G + + LL EM+ G T+ +L++GLCK G +K A + L+
Sbjct: 485 DVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLD 544
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHA------INVFESMEVKDSFTYSSMVHNLCK 354
M IG + YN ++ +G HA I E V D +Y S+V+ L +
Sbjct: 545 AMLNIGVVPDDITYNTLL-----EGHHRHANSSKRYIQKPEIGIVADLASYKSIVNELDR 599
Query: 355 AKR 357
A +
Sbjct: 600 ASK 602
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 161/322 (50%), Gaps = 4/322 (1%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
E+L+ G P +V+ +N LM+ + G +A +VF ++ L P +FN ++NG CK
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D R+ ++K P++ TY+ LI LCK ++ A + E+ G PN + +T
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T++ RN + L E M KG D Y T++ F K G L A + ++ M+
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G++ D ++Y TLI+ +C+ G +E A + EM++ G E D+ + L+ G+CK G + A
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 351
L M + G + Y ++D K G + + M+ V TY+ +++
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNG 529
Query: 352 LCKAKRLPSASKLLLSCLKSGV 373
LCK ++ +A LL + L GV
Sbjct: 530 LCKLGQMKNADMLLDAMLNIGV 551
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 8/217 (3%)
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+EIL A G+ + + + ++ F K G + +A +++ +Q +VS+NTLIN
Sbjct: 229 MEILDA----GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLING 284
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
YCK G L+ + L +MEK D +T++ LI+ LCK + GA + M K G N
Sbjct: 285 YCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPN 344
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
+ ++ ++G+ID ++ M K D Y+++V+ CK L +A ++
Sbjct: 345 DVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++ G+R K ++DG G A +I+ ++
Sbjct: 405 GMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEM 441
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 188/416 (45%), Gaps = 26/416 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL------LD 55
L+ AYC+ F Y +L +M + P V YN LI L + +
Sbjct: 384 LVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYN 443
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
EML G + + S CL GK ++A +V +M+ P T+T++ ++ LC
Sbjct: 444 EMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNAS 503
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
+NA +F+ ++ G VP++ TY ILI KAG ++ A L E+ G P +TYT
Sbjct: 504 RVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYT 563
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T++ + +K + E+ M KG + Y +I + K G +++A +M D
Sbjct: 564 TLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGD 623
Query: 236 ----------------GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
+ ++V+Y L++ CK K++ A LL+ M G E + +
Sbjct: 624 ADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVY 683
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME- 338
LIDG CKA + A+ M + G++ N+ Y+ ++DRL KD ++D + V M
Sbjct: 684 DALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLE 743
Query: 339 ---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ Y+ M+ L K + A KL+L + G + A++DG +G
Sbjct: 744 NSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAG 799
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 189/459 (41%), Gaps = 61/459 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C+ F+ LNRMR P+V TY L+ G L +L M+ G
Sbjct: 314 MISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEG 373
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK-------- 113
P +NSL+H + A ++ + M + P +NI++ +C
Sbjct: 374 CYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPV 433
Query: 114 -------------------NRYT--------------DNALRMFRGLQKHGFVPELVTYN 140
N+ + A ++ + +GFVP+ TY+
Sbjct: 434 TFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYS 493
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
+I LC A R+ A ++ KE+ +G P+ TYT ++ C + K L M R
Sbjct: 494 EVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRD 553
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G Y T+I A++K ++ A + E M+ G ++++Y LI+ YCK G +E A
Sbjct: 554 GCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKA 613
Query: 261 YLLLDEMEKQG--FECDKY--------------THTILIDGLCKAGNIKGARLHLEYMNK 304
+ M + D Y T+ L+DGLCKA +K AR LE M
Sbjct: 614 CQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFV 673
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPS 360
G + N Y+ ++D K K+D A VF M + +TYSS++ L K KRL
Sbjct: 674 DGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDL 733
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
K+L L++ ++DGL EA K+
Sbjct: 734 VLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKL 772
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 179/418 (42%), Gaps = 67/418 (16%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM-HCLF 77
L+ + + P+ + YN +I+G S ++D L+ M P+V +Y L+ CL
Sbjct: 296 LSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLN 355
Query: 78 --QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
QLG+ R+ MI P FN +++ CK+ A ++ + ++K P
Sbjct: 356 KKQLGR---CKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPG 412
Query: 136 LVTYNILIKGLCKAGRL-----------------------------------------RT 154
V YNILI +C G L
Sbjct: 413 YVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEK 472
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
A ++ E+ +G P+ TY+ ++ + + + MK G D + Y +I
Sbjct: 473 AYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILID 532
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
F K G +K+A +++++MV DG + +V+Y TLI+ Y K K+ A L + M +G
Sbjct: 533 CFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFP 592
Query: 275 DKYTHTILIDGLCKAGNIKGA----------------RLHLEYMNKIGFDSNLEAYNCIV 318
+ T+T LIDG CK+GNI+ A ++ + N + N+ Y +V
Sbjct: 593 NVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALV 652
Query: 319 DRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
D L K K+ A ++ E+M V ++ Y +++ CKA +L A ++ ++ G
Sbjct: 653 DGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHG 710
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 180/385 (46%), Gaps = 24/385 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID + + + L+ M G P VVTY +LI + +S + +L + M+
Sbjct: 529 ILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAK 588
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL-----------------TPCTAT 103
G P+V +Y +L+ + G ++A +++ M GD P T
Sbjct: 589 GCFPNVITYTALIDGYCKSGNIEKACQIYARMR-GDADIPDVDMYFKIKNNVAEKPNVVT 647
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
+ +++GLCK +A + + G P + Y+ LI G CKA +L A+ + ++
Sbjct: 648 YGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMV 707
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+ G+ PN TY++++ F++++ L L++LS M + Y +I K+ +
Sbjct: 708 EHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTD 767
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
EA M M G + ++V+Y +I+ + K GK++ L EM +G + T+T+LI
Sbjct: 768 EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLI 827
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS- 342
+ C G++ A LE M + + ++ +Y +++ G + ++ + E +E S
Sbjct: 828 NHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIE--GYKREFILSLGLLEEVEKNGSA 885
Query: 343 ---FTYSSMVHNLCKAKRLPSASKL 364
Y ++ N KA RL A +L
Sbjct: 886 PIILLYKVLIDNFVKAGRLEVALEL 910
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 187/419 (44%), Gaps = 23/419 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ ++ L R+++ G P +TYN+L+ R L + + EM E+
Sbjct: 211 VLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSEL 270
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ D ++ L ++GK EA + + D P T +N M++GLC+ + + A
Sbjct: 271 GLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFEEA 327
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++ +P + TY IL+ G +L + IL + G P+ + +++
Sbjct: 328 MDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHA 387
Query: 181 CFRNRKYKLGLEILSAMK----RKGYTFDGFGYCTVIAAFVKIGRLKEATDY------ME 230
++ + ++L M+ + GY Y +I + G L +
Sbjct: 388 YCKSDDFSYAYKLLKKMEKCECKPGYVV----YNILIGSICSGGELPGPVTFELAEKAYN 443
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+M++ G L+ V+ + C GK E AY ++ EM GF D T++ +I LC A
Sbjct: 444 EMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNAS 503
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-----FTY 345
++ A + M G ++ Y ++D K G I A N + M V+D TY
Sbjct: 504 RVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEM-VRDGCEPTVVTY 562
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++++H KAK++ A++L + G A++DG SG +A +I +++R
Sbjct: 563 TTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMR 621
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 130/266 (48%), Gaps = 2/266 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+ +L M G P+ + Y++LI G + + L + ++ +M+E G
Sbjct: 651 LVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHG 710
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V++Y+SL+ LF+ + D +V M+ P + M++GL K TD A
Sbjct: 711 YNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAY 770
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ +++ G P +VTY +I G KAG++ + +E+G G APN +TYT ++ C
Sbjct: 771 KLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHC 830
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+L MK+ + YC VI + + L + +E++ +G I
Sbjct: 831 CATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFIL--SLGLLEEVEKNGSAPII 888
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEM 267
+ Y LI+ + K G+LE A L E+
Sbjct: 889 LLYKVLIDNFVKAGRLEVALELHKEV 914
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 147/376 (39%), Gaps = 67/376 (17%)
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATF-NIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
+F+ G D F I GD N+++ C+N + AL L+ G+ P
Sbjct: 180 VFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKP 239
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
+TYN L++ +A +L TA+ + +E+ + G + + T + + K++ E L
Sbjct: 240 TRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWR---EAL 296
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ----------------------- 231
S ++++ + + Y +I+ + +EA D++ +
Sbjct: 297 SLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNK 356
Query: 232 ------------MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
M+ +G +N+L++ YCK AY LL +MEK + +
Sbjct: 357 KQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVY 416
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR---------------LGKD 324
ILI +C G + G + F+ +AYN ++ L
Sbjct: 417 NILIGSICSGGELPGP---------VTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF 467
Query: 325 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
GK + A V M V D+ TYS ++ LC A R+ +A L +GV
Sbjct: 468 GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTY 527
Query: 381 KAVVDGLRHSGCRREA 396
++D +G ++A
Sbjct: 528 TILIDCFSKAGIIKQA 543
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 7/128 (5%)
Query: 3 IDAYCQFVS-----FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 57
+ +YC+ + F +L + + G +P ++ Y LI + L +L+L E+
Sbjct: 855 VSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEV 914
Query: 58 LE--MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
+ M + Y SL++ K A +F DMI + P TF +L GL + R
Sbjct: 915 ISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVR 974
Query: 116 YTDNALRM 123
+ AL++
Sbjct: 975 RWEEALQL 982
>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
inaguensis]
Length = 431
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 150/285 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV+YN+L+ G R L L ML
Sbjct: 147 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 206
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN +F +M+ L P TF ++ G CKN D A
Sbjct: 207 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVDLA 266
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + +P+L+TYN LI GLCK G L+ A ++ E+ G P+ TYTT++
Sbjct: 267 MEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDG 326
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + + M + D Y +I+ + GR +A + +M++ G++ D
Sbjct: 327 CCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 386
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
I +Y +IN +CK+G + LL EM++ G T+ +L++G
Sbjct: 387 IGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVVTYNVLMNG 431
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 157/309 (50%), Gaps = 2/309 (0%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ ++ + + + D + + G+ P V SYN+
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 182
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M+ + P T+++++NGLCK D+A +F + G
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 242
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
+P VT+ LI G CK GR+ A I K + P+ ITY T++ + K
Sbjct: 243 LIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAH 302
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
++ M KG D F Y T+I K G L A + ++M+ ++LD V+Y LI+
Sbjct: 303 XLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGL 362
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 310
C+EG+ A +L EM G + D T+T++I+ CK G++ KG++L L+ M + G +
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKL-LKEMQRNGHVPS 421
Query: 311 LEAYNCIVD 319
+ YN +++
Sbjct: 422 VVTYNVLMN 430
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 136/284 (47%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E+LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ + G P++ TY++LI GLCK ++ A + E+ G PN +T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 250
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + D Y T+I K G LK+A +++M
Sbjct: 251 TTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSM 310
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D +Y TLI+ CKEG L+ A+ M + D +T LI GLC+ G
Sbjct: 311 KGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVD 370
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G ++ Y I++ K G + + + M+
Sbjct: 371 AEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 129/272 (47%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K RY + + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 113 VLEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 172
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ ++Y T+M R G + SAM G D + Y +I K ++ +A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 232
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ + V++ TLI +CK G+++ A + M Q D T+ LI GL
Sbjct: 233 ELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGL 292
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVK-DS 342
CK G++K A ++ M+ G + Y ++D K+G +D A + M ++ D
Sbjct: 293 CKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDD 352
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 189/412 (45%), Gaps = 39/412 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C +++ + + G P+ +T N+LI G + +L D+++
Sbjct: 97 ILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQ 156
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D SY +L++ L + G+ R+ + + + P +N ++N LCKN+ +A
Sbjct: 157 GFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDA 216
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY------ 174
++ + G P++VTY LI G C G L+ A +L E+ PN T+
Sbjct: 217 CDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDA 276
Query: 175 --------------TTIMKCCFRNRKY---------------KLGLEILSAMKRKGYTFD 205
+MK C + + K + +M ++G T D
Sbjct: 277 LSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPD 336
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y +I K + EA E+M + DIV+YN+LI+ CK LE A L
Sbjct: 337 VQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCK 396
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M++QG + D Y++TIL+DGLCK+G ++ A+ + + G+ N+ AY +++RL K G
Sbjct: 397 RMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAG 456
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
D A+++ ME K D+ T+ ++ L + A K+L + G+
Sbjct: 457 FFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 189/401 (47%), Gaps = 8/401 (1%)
Query: 14 AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 73
A + ++ MR P +N++++ N + L + GI PD+ + + L+
Sbjct: 43 ASFNLMLLMRPP---PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILI 99
Query: 74 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 133
+C A VF +++ P T N ++ GLC AL L GF
Sbjct: 100 NCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQ 159
Query: 134 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 193
+ V+Y LI GLCK G + +L++L P+ + Y TI+ +N+ ++
Sbjct: 160 LDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDV 219
Query: 194 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 253
S M KG + D Y T+I F +G LKEA + +M + ++ ++N LI+ K
Sbjct: 220 YSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSK 279
Query: 254 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
EGK++ A +LL M K + D +T+ LIDG +K A+ M + G +++
Sbjct: 280 EGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQC 339
Query: 314 YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 369
Y +++ L K +D A+++FE M+ + D TY+S++ LCK L A L
Sbjct: 340 YTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMK 399
Query: 370 KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
+ G++ + ++DGL SG +AK+I ++ +AK H
Sbjct: 400 EQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRL-LAKGYH 439
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 188/392 (47%), Gaps = 4/392 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + GI+PD+ T + LI + ++ + + +L+ G P+ + N+L+ L
Sbjct: 78 SLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGL 137
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
G+ +A ++ ++ ++NGLCK T R+ R L+ H P++
Sbjct: 138 CFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDV 197
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
V YN +I LCK L A + E+ G +P+ +TYTT++ K +L+
Sbjct: 198 VMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNE 257
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
MK K + + +I A K G++KEA + M+ ++ D+ +YN+LI+ Y +
Sbjct: 258 MKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDE 317
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
++ A + M ++G D +T +I+GLCK + A E M ++ YN
Sbjct: 318 VKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNS 377
Query: 317 IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++D L K+ ++ AI + + M+ + D ++Y+ ++ LCK+ RL A ++ L G
Sbjct: 378 LIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKG 437
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A +++ L +G EA ++SK+
Sbjct: 438 YHLNVHAYTVLINRLCKAGFFDEALDLKSKME 469
>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like, partial [Glycine max]
Length = 594
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 186/377 (49%), Gaps = 7/377 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM- 60
L+ C D + + M + PDVVTYN+LI G + + LL+EM
Sbjct: 143 LVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEMKSRG 202
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ ++N ++ + GK +EA+ M+ ++P T+N M+NG CK A
Sbjct: 203 GVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEA 262
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
RM + + G P++ T N ++ LC + A + + G+ + +TY T++
Sbjct: 263 FRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMG 322
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+ ++ L++ MK++G Y +I G+ +A D + +++ G+ D
Sbjct: 323 YFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPD 382
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
VS N +I+ YC EG ++ A+ ++M F+ D +T IL+ GLC+ ++ A +L
Sbjct: 383 EVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFN 442
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+++K ++ YN ++ L K+G++D A ++ MEVK D +TY+++V L A
Sbjct: 443 SWISKQN-SVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHA 501
Query: 356 KRLPSASKLLLSCLKSG 372
R A K + ++G
Sbjct: 502 GRTEEAEKFMSKLSETG 518
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 181/384 (47%), Gaps = 11/384 (2%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
S DV TYN+L+ G + ++ + DEM + + PDV +YN+L+ F+ E R
Sbjct: 134 SIDVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFR 193
Query: 88 VFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ ++M G + P T NIM+ K + A + + G P+ TYN +I G
Sbjct: 194 LLEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGF 253
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CKAG+L A ++ E+ G P+ T T++ +K + E+ +++GY D
Sbjct: 254 CKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDE 313
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T+I + K + +A E+M G+ +VSYN LI C GK + A L+E
Sbjct: 314 VTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNE 373
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI---GFDSNLEAYNCIVDRLGK 323
+ ++G D+ + I+I G C G + A ++ NK+ F ++ N ++ L +
Sbjct: 374 LLEKGLVPDEVSCNIIIHGYCWEGMVDKA---FQFHNKMVGNSFKPDIFTRNILLRGLCR 430
Query: 324 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
++ A +F S K D TY++M+ LCK RL A L+ +
Sbjct: 431 VDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYT 490
Query: 380 QKAVVDGLRHSGCRREAKKIQSKI 403
A+V L H+G EA+K SK+
Sbjct: 491 YNAIVRALTHAGRTEEAEKFMSKL 514
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 192/423 (45%), Gaps = 57/423 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMRE-AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
LID ++ G+ +L M+ G+ P+ VT+N ++ + ++ + D + +M+E
Sbjct: 178 LIDGCFKWRGSTEGFRLLEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVES 237
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC-------- 112
G+ PD ++YN++++ + GK EA R+ +M L P T N ML+ LC
Sbjct: 238 GVSPDCFTYNTMINGFCKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEA 297
Query: 113 ---------------------------KNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
K + D AL+++ ++K G VP +V+YN LI+G
Sbjct: 298 YELTVKARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRG 357
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTF 204
LC +G+ A L EL + G P+ ++ I+ C+ K + + M +
Sbjct: 358 LCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDK-AFQFHNKMVGNSFKP 416
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D F ++ ++ L++A ++ +D+V+YNT+I+ CKEG+L+ A+ L+
Sbjct: 417 DIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLM 476
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+ME + FE D+YT+ ++ L AG + A ++M+K L +
Sbjct: 477 TDMEVKKFEPDQYTYNAIVRALTHAGRTEEAE---KFMSK----------------LSET 517
Query: 325 GKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 384
G+ + + ++ YS + +LC + A KL + GV + K ++
Sbjct: 518 GQAVKTHDTSQELDASSDIMYSQQISDLCTQGKYKEAMKLFQESEQKGVSLNKYTYIKLM 577
Query: 385 DGL 387
DG
Sbjct: 578 DGF 580
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 141/299 (47%), Gaps = 12/299 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ C + Y + + R+ G D VTY +LI G + +L L +EM + G
Sbjct: 284 MLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRG 343
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P V SYN L+ L GK D+A +++ L P + NI+++G C D A
Sbjct: 344 IVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAF 403
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + F P++ T NIL++GLC+ L A + ++ + +TY T++
Sbjct: 404 QFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYL 463
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV---- 237
+ + ++++ M+ K + D + Y ++ A GR +EA +M ++ G
Sbjct: 464 CKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKT 523
Query: 238 -----QLDIVS---YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+LD S Y+ I+ C +GK + A L E E++G +KYT+ L+DG K
Sbjct: 524 HDTSQELDASSDIMYSQQISDLCTQGKYKEAMKLFQESEQKGVSLNKYTYIKLMDGFLK 582
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 12/198 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I YC D + N+M PD+ T N L+ G R +L + L + +
Sbjct: 388 IIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISK 447
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
DV +YN+++ L + G+ DEA + DM P T+N ++ L T+ A
Sbjct: 448 QNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEA 507
Query: 121 LRMF-------RGLQKHGFVPEL-----VTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
+ + ++ H EL + Y+ I LC G+ + A + +E G +
Sbjct: 508 EKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQISDLCTQGKYKEAMKLFQESEQKGVS 567
Query: 169 PNAITYTTIMKCCFRNRK 186
N TY +M + RK
Sbjct: 568 LNKYTYIKLMDGFLKRRK 585
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 179/358 (50%), Gaps = 1/358 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ +C+ + + + + + + P VV++N+LI G + L L M +
Sbjct: 245 ILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKS 304
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV++Y++L++ L + K D A+R+F +M L P F +++G +N D
Sbjct: 305 RTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLM 364
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G P++V YN L+ G CK G L AR I+ + G P+ +TYTT++
Sbjct: 365 KESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDG 424
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R LEI M + G D G+ +I K GR+ +A + +M+ G++ D
Sbjct: 425 FCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPD 484
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+Y +++ +CK+G + + LL EM+ G + T+ +L++GLCK G +K A + L+
Sbjct: 485 DVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLD 544
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKID-HAINVFESMEVKDSFTYSSMVHNLCKAKR 357
M +G + YN +++ + H E V D +Y S+V+ L +A +
Sbjct: 545 AMLNVGVVPDDITYNTLLEGHHRHANASKHYKQKPEIGIVADLASYKSLVNELYRASK 602
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 173/348 (49%), Gaps = 5/348 (1%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
E+L+ G P +V+ +N LM+ + G +A +VF ++ L P +FN ++NG CK
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVG 289
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D R+ ++K P++ TY+ LI LCK ++ A + E+ + G PN + +T
Sbjct: 290 NLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFT 349
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T++ RN + L E M KG D Y T++ F K G L A + ++ M+
Sbjct: 350 TLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G++ D V+Y TLI+ +C+ G ++ A + EM++ G E D+ + LI G+CK G + A
Sbjct: 410 GLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDA 469
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 351
L M + G + Y ++D K G + + M+ + + TY+ +++
Sbjct: 470 ERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNG 529
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG-LRHSGCRREAKK 398
LCK ++ +A LL + L GV +++G RH+ + K+
Sbjct: 530 LCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHANASKHYKQ 577
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 134/327 (40%), Gaps = 58/327 (17%)
Query: 52 DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 111
+LLD M+++ VW + + +++ FNI++N
Sbjct: 210 NLLDRMMKLNPTGTVWGF-------------------YMEILDAGFPLNVYVFNILMNKF 250
Query: 112 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 171
CK +A ++F + K P +V++N LI G CK G L + + S P+
Sbjct: 251 CKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDV 310
Query: 172 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 231
TY+ ++ + K + M +G + + T+I + G++ + ++
Sbjct: 311 FTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQK 370
Query: 232 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
M++ G+Q DIV YNT L++G CK G+
Sbjct: 371 MLSKGLQPDIVLYNT-----------------------------------LVNGFCKNGD 395
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSS 347
+ AR ++ M + G + Y ++D + G +D A+ + + M+ D +S+
Sbjct: 396 LVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSA 455
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSGVR 374
++ +CK R+ A + L L++G++
Sbjct: 456 LICGMCKEGRVIDAERALREMLRAGMK 482
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 8/217 (3%)
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+EIL A G+ + + + ++ F K G + +A +++ ++ +VS+NTLIN
Sbjct: 229 MEILDA----GFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLING 284
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
YCK G L+ + L MEK D +T++ LI+ LCK + GA M + G N
Sbjct: 285 YCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPN 344
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
+ ++ ++G+ID ++ M K D Y+++V+ CK L +A ++
Sbjct: 345 DVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++ G+R K ++DG G A +I+ ++
Sbjct: 405 GMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEM 441
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 124/287 (43%), Gaps = 4/287 (1%)
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
+ + ++ FR +KH FV + L+ + K T E+ D+G N +
Sbjct: 185 FIPDVIQCFRLSRKHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFN 244
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
+M + ++ + ++ + T+I + K+G L M
Sbjct: 245 ILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKS 304
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
+ D+ +Y+ LIN CKE K++ A+ L EM ++G + T LI G + G I
Sbjct: 305 RTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLM 364
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 351
+ + M G ++ YN +V+ K+G + A N+ + M + D TY++++
Sbjct: 365 KESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDG 424
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
C+ + +A ++ ++G+ + + A++ G+ G +A++
Sbjct: 425 FCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAER 471
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 182/374 (48%), Gaps = 3/374 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC+ S D +L+ M + G++P +Y+ LIAG RN LS ++L EM E G
Sbjct: 414 LINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERG 473
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I + +++ +L++ + K DEA R+F MI ++ P TFN+M+ G C A
Sbjct: 474 IAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAF 533
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + + G P+ TY LI GLC + A + +L +S N + T ++
Sbjct: 534 QLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGF 593
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
FR ++ + M +G D + ++ A +K +++ +M GV+ D
Sbjct: 594 FREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDD 653
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ Y +I+ KE + A D+M G+ + THT+LI+ LCK+G + A L +
Sbjct: 654 IFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKE 713
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDSFTYSSMVHNLCKAKRL 358
M N YNC +D +G ++ A ++ +M + +++ ++ LCKA ++
Sbjct: 714 MLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKI 773
Query: 359 PSASKLLLSCLKSG 372
A L+ +SG
Sbjct: 774 QEAIDLMSKITESG 787
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 173/374 (46%), Gaps = 18/374 (4%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
I AYC+ + D ++ RM G+ V YN L+ G +N + ++++ + M+ +G+
Sbjct: 205 IRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGV 264
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
D +Y +L++ ++ + + A R+ DMI P A + M++ L K + A
Sbjct: 265 TADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS 324
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ L G VP + YN LI LCK R A + KE+ G PN +TY ++
Sbjct: 325 LACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC 384
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ + L + M+ KG + Y ++I + K G L A + MV +G+
Sbjct: 385 KRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAA 444
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
SY+ LI C+ G L + L EM ++G + YT T LI+G CK + A + M
Sbjct: 445 SYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM 504
Query: 303 -------NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHN 351
N++ F+ +E Y C+V G I A +++ M D++TY S++
Sbjct: 505 IDSNVIPNEVTFNVMIEGY-CLV------GNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557
Query: 352 LCKAKRLPSASKLL 365
LC + A++ +
Sbjct: 558 LCLTSGVSKANEFV 571
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 186/406 (45%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ FD + M G+ P+ VTY LI + ++ +L L D+M + G
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I V+ YNSL++ + G D A + M+ LTP A+++ ++ GLC+N + +
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 463
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ R + + G T+ LI G CK ++ A + ++ DS PN +T+ +++
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ M G D + Y ++I+ + +A +++ + L+
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 583
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
S L+ + +EG+ Y L DEM +G + D + TI++ K + + + +
Sbjct: 584 FSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 643
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M + G + Y C++D L K+ + A+N ++ M V ++ T++ +++NLCK+
Sbjct: 644 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGY 703
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L SA L L V K +D G +AK + S +
Sbjct: 704 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 147/294 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ +C+ + I + M G P + +I + L+ + L ++ ++G
Sbjct: 274 LVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLG 333
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V++YN+L+ L + + D+A+R+F++M L P T+ I+++ LCK ++AL
Sbjct: 334 MVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDAL 393
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ G + YN LI G CK G L AR +L + G P A +Y+ ++
Sbjct: 394 CLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGL 453
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
RN +E+ M +G ++ + + +I F K ++ EA ++M+ V +
Sbjct: 454 CRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 513
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
V++N +I YC G + A+ L D+M + G + D YT+ LI GLC + A
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKA 567
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 174/410 (42%), Gaps = 41/410 (10%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L +GI+ + T + ++ + + + DL D+ML+ G+ D + Y + +
Sbjct: 150 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 209
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ D A + M + +N+++ GLCKN A+ + + G + V
Sbjct: 210 ESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 269
Query: 138 TYNILIKGLCKAGRLRTARWILKE-----------------------------------L 162
TY L+ G C+ L A I + L
Sbjct: 270 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKL 329
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
GD G PN Y ++ +N ++ + M +G + Y +I A K G +
Sbjct: 330 GDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMI 389
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
++A ++M G+++ + YN+LIN YCK+G L+ A LL M K+G +++ L
Sbjct: 390 EDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPL 449
Query: 283 IDGLCKAGNIKG-ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---- 337
I GLC+ G++ LH E M + G N + +++ KD K+D A +F+ M
Sbjct: 450 IAGLCRNGDLSSCMELHRE-MAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSN 508
Query: 338 EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ + T++ M+ C + A +L ++ G++ ++++ GL
Sbjct: 509 VIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 185/433 (42%), Gaps = 48/433 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C+ D + ++M ++ + P+ VT+N +I G + + L D+M+EMG
Sbjct: 484 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG 543
Query: 62 IPPDVWSYNSL-----------------------------------MHCLFQLGKPDEAN 86
+ PD ++Y SL ++ F+ G+ E
Sbjct: 544 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETY 603
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
++ +M + +F I++ K + + +FR +++ G P+ + Y +I L
Sbjct: 604 HLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 663
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF-D 205
K + A ++ G++PN +T+T ++ ++ Y E+L G +
Sbjct: 664 SKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKS-GYLGSAELLCKEMLAGNVLPN 722
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
F Y + F G +++A D M+ G IVS+N LI CK GK++ A L+
Sbjct: 723 KFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMS 781
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
++ + GF D +++ +I LCK G+I A M G ++ AYN + G
Sbjct: 782 KITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHG 841
Query: 326 KIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLL----SCLKSGVRILKSAQK 381
+ D A+ ++ +M S + N + L S L+L SC + + ++ +
Sbjct: 842 ESDKALGIYTNM------IRSGVQPNWDTYRALLSGISLMLHYDFSCFRGTKQYIQISVY 895
Query: 382 AVVDGLRHSGCRR 394
++D + RR
Sbjct: 896 ELMDSTHNKSHRR 908
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 128/293 (43%), Gaps = 4/293 (1%)
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
T + +L L K R A +F + + G + Y I+ C++ L AR ++ +
Sbjct: 165 TASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRM 224
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
G +A+ Y +M +N + + +E+ + M G T D Y T++ F ++ L
Sbjct: 225 ESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEEL 284
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
+ A M+ G + + +I+ K+ +E A+ L ++ G + + + L
Sbjct: 285 EMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNAL 344
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 340
ID LCK A + M G + N Y ++ L K G I+ A+ +F+ M K
Sbjct: 345 IDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGI 404
Query: 341 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ Y+S+++ CK L A LL +K G+ ++ ++ GL +G
Sbjct: 405 KVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 113/276 (40%), Gaps = 39/276 (14%)
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
SG N T + I+ + R++ L ++ M + G D + Y I A+ + L
Sbjct: 157 SGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDG 216
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A + +M ++GV+ V YN L+ CK +++ A + + M G D+ T+ L+
Sbjct: 217 ARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVY 276
Query: 285 GLCKAGNIKGARLHLEYMNKIGF-----------------------------------DS 309
G C+ ++ A M ++GF
Sbjct: 277 GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVP 336
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
N+ AYN ++D+L K+ + D A +F+ M + + TY+ ++H LCK + A L
Sbjct: 337 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 396
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
G+++ ++++G G A+ + S
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLS 432
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 69/130 (53%), Gaps = 2/130 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ +++++ E+G SPD ++Y+++I + ++ + +L +EML
Sbjct: 762 ILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK 821
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV +YN + G+ D+A ++ +MI + P T+ +L+G+ + D
Sbjct: 822 GLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYD-- 879
Query: 121 LRMFRGLQKH 130
FRG +++
Sbjct: 880 FSCFRGTKQY 889
>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 418
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 142/284 (50%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E LE G P ++ +N LMH + G+ A VF + L P +FN ++NG K
Sbjct: 125 EENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
+ R+ +Q G P++ TY++LI GLCK ++ A + E+ D G PN +T+
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A D +++M+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG LE A+ M K+ D +T LI GLC+ G
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K G + + + M+
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 142/256 (55%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + + + G+ P VV++N+L+ G + L+ L + M G+ PDV++Y+ L++ L
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ K D+AN +F +M+ L P TF +++G CKN D A+ +++ + P+L
Sbjct: 217 CKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+TYN LI GLCK G L+ A+ ++ E+ G P+ ITYTT++ + + E
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKR 336
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M ++ D Y +I+ + GR +A + +M++ G++ +I +Y +IN +CK+G
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396
Query: 257 LEAAYLLLDEMEKQGF 272
+ LL EM++ G+
Sbjct: 397 VWTGSKLLKEMQRDGY 412
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 146/284 (51%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + G+ P V S+N+LM+ +LG +
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M + P T+++++NGLCK D+A +F + G VP VT+ LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I K++ +P+ ITY T++ + K +++ M KG
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A +Y ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
L EM G + + T+T++I+ CK G++ L+ M + G+
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 139/300 (46%), Gaps = 4/300 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F+ ++ ++ + +A+ +R ++H F T +++ L K + +E
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENL 128
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+ G+ + + +M + + +L + A+ + G + T++ ++K+G L
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN 188
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
E M GVQ D+ +Y+ LIN CKE K++ A +L DEM +G + T T LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLI 248
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
DG CK G + A + M +L YN ++ L K G + A ++ + M +K
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLK 308
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D TY++++ CK L +A + +K +R+ A A++ GL G +A+K+
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 101/202 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ D + + M + G+ P+ VT+ +LI G +N + ++++ +ML
Sbjct: 211 VLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+ +YN+L++ L + G +A + +MI L P T+ +++G CK + A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETA 330
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K + V Y LI GLC+ GR A +L+E+ G P TYT I+
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 181 CFRNRKYKLGLEILSAMKRKGY 202
+ G ++L M+R GY
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGY 412
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ D I +M +SPD++TYN+LI G + L + DL+DEM+ G
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y +L+ + G + A + MI ++ + +++GLC+ + +A
Sbjct: 307 LKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+M R + G PE+ TY ++I CK G + T +LKE+ G+ P+ +T
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 188/416 (45%), Gaps = 26/416 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL------LD 55
L+ AYC+ F Y +L +M + P V YN LI L + +
Sbjct: 384 LVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYN 443
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
EML G + + S CL GK ++A +V +M+ P T+T++ ++ LC
Sbjct: 444 EMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNAS 503
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
+NA +F+ ++ G VP++ TY ILI KAG ++ A L E+ G P +TYT
Sbjct: 504 RVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYT 563
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T++ + +K + E+ M KG + Y +I + K G +++A +M D
Sbjct: 564 TLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGD 623
Query: 236 ----------------GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
+ ++V+Y L++ CK K++ A LL+ M G E + +
Sbjct: 624 ADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVY 683
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME- 338
LIDG CKA + A+ M + G++ N+ Y+ ++DRL KD ++D + V M
Sbjct: 684 DALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLE 743
Query: 339 ---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ Y+ M+ L K + A KL+L + G + A++DG +G
Sbjct: 744 NSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAG 799
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 190/459 (41%), Gaps = 61/459 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C+ F+ LNRMR P+V TY L+ G L +L M+ G
Sbjct: 314 MISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEG 373
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK-------- 113
P +NSL+H + A ++ + M + P +NI++ +C
Sbjct: 374 CYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPV 433
Query: 114 -------------------NRYT--------------DNALRMFRGLQKHGFVPELVTYN 140
N+ + A ++ + +GFVP+ TY+
Sbjct: 434 TFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYS 493
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
+I LC A R+ A ++ KE+ +G P+ TYT ++ C + K L M R
Sbjct: 494 EVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRD 553
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G Y T+I A++K ++ A + E M+ G ++++Y LI+ YCK G +E A
Sbjct: 554 GCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKA 613
Query: 261 YLLLDEMEKQG--FECDKY--------------THTILIDGLCKAGNIKGARLHLEYMNK 304
+ M + D Y T+ L+DGLCKA +K AR LE M
Sbjct: 614 CQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFV 673
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPS 360
G + N Y+ ++D K K+D A VF M + + +TYSS++ L K KRL
Sbjct: 674 DGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDL 733
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
K+L L++ ++DGL EA K+
Sbjct: 734 VLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKL 772
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 179/418 (42%), Gaps = 67/418 (16%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM-HCLF 77
L+ + + P+ + YN +I+G S ++D L+ M P+V +Y L+ CL
Sbjct: 296 LSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLN 355
Query: 78 --QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
QLG+ R+ MI P FN +++ CK+ A ++ + ++K P
Sbjct: 356 KKQLGR---CKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPG 412
Query: 136 LVTYNILIKGLCKAGRL-----------------------------------------RT 154
V YNILI +C G L
Sbjct: 413 YVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEK 472
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
A ++ E+ +G P+ TY+ ++ + + + MK G D + Y +I
Sbjct: 473 AYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILID 532
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
F K G +K+A +++++MV DG + +V+Y TLI+ Y K K+ A L + M +G
Sbjct: 533 CFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFP 592
Query: 275 DKYTHTILIDGLCKAGNIKGA----------------RLHLEYMNKIGFDSNLEAYNCIV 318
+ T+T LIDG CK+GNI+ A ++ + N + N+ Y +V
Sbjct: 593 NVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALV 652
Query: 319 DRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
D L K K+ A ++ E+M V ++ Y +++ CKA +L A ++ ++ G
Sbjct: 653 DGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERG 710
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 180/385 (46%), Gaps = 24/385 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID + + + L+ M G P VVTY +LI + +S + +L + M+
Sbjct: 529 ILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAK 588
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL-----------------TPCTAT 103
G P+V +Y +L+ + G ++A +++ M GD P T
Sbjct: 589 GCFPNVITYTALIDGYCKSGNIEKACQIYARMR-GDADIPDVDMYFKIKNNVAEKPNVVT 647
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
+ +++GLCK +A + + G P + Y+ LI G CKA +L A+ + ++
Sbjct: 648 YGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMV 707
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+ G+ PN TY++++ F++++ L L++LS M + Y +I K+ +
Sbjct: 708 ERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTD 767
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
EA M M G + ++V+Y +I+ + K GK++ L EM +G + T+T+LI
Sbjct: 768 EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLI 827
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS- 342
+ C G++ A LE M + + ++ +Y +++ G + ++ + E +E S
Sbjct: 828 NHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIE--GYKREFILSLGLLEEVEKNGSA 885
Query: 343 ---FTYSSMVHNLCKAKRLPSASKL 364
Y ++ N KA RL A +L
Sbjct: 886 PTILLYKVLIDNFVKAGRLEVALEL 910
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/465 (22%), Positives = 194/465 (41%), Gaps = 96/465 (20%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C + + + M+ G+ PDV TY LI ++ ++ + + LDEM+ G
Sbjct: 495 VIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDG 554
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y +L+H + K AN +F+ MI P T+ +++G CK+ + A
Sbjct: 555 CEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKAC 614
Query: 122 RMF-----------------------------------------------RGLQKHGFV- 133
+++ R L + FV
Sbjct: 615 QIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVD 674
Query: 134 ---PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
P + Y+ LI G CKA +L A+ + ++ + G+ PN TY++++ F++++ L
Sbjct: 675 GCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLV 734
Query: 191 LEILSAM-----------------------------------KRKGYTFDGFGYCTVIAA 215
L++LS M + KG + Y +I
Sbjct: 735 LKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDG 794
Query: 216 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
F K G++ + + +M + G + V+Y LIN C G L+ AY LL+EM++ +
Sbjct: 795 FGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKH 854
Query: 276 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
++ +I+G K I L LE + K G + Y ++D K G+++ A+ + +
Sbjct: 855 VSSYCKVIEGY-KREFILSLGL-LEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHK 912
Query: 336 -------SMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
SM K + Y+S++++ A ++ A +L ++ GV
Sbjct: 913 EVISASMSMTAKKNL-YTSLIYSFSYASKIDHAFELFYDMIRDGV 956
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 187/419 (44%), Gaps = 23/419 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ ++ L R+++ G P +TYN+L+ R L + + EM E+
Sbjct: 211 VLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSEL 270
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ D ++ L ++GK EA + + D P T +N M++GLC+ + + A
Sbjct: 271 GLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFEEA 327
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++ +P + TY IL+ G +L + IL + G P+ + +++
Sbjct: 328 MDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHA 387
Query: 181 CFRNRKYKLGLEILSAMK----RKGYTFDGFGYCTVIAAFVKIGRLKEATDY------ME 230
++ + ++L M+ + GY Y +I + G L +
Sbjct: 388 YCKSDDFSYAYKLLKKMEKCECKPGYVV----YNILIGSICSGGELPGPVTFELAEKAYN 443
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+M++ G L+ V+ + C GK E AY ++ EM GF D T++ +I LC A
Sbjct: 444 EMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNAS 503
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-----FTY 345
++ A + M G ++ Y ++D K G I A N + M V+D TY
Sbjct: 504 RVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEM-VRDGCEPTVVTY 562
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++++H KAK++ A++L + G A++DG SG +A +I +++R
Sbjct: 563 TTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMR 621
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 147/376 (39%), Gaps = 67/376 (17%)
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATF-NIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
+F+ G D F I GD N+++ C+N + AL L+ G+ P
Sbjct: 180 VFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKP 239
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
+TYN L++ +A +L TA+ + +E+ + G + + T + + K++ E L
Sbjct: 240 TRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWR---EAL 296
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ----------------------- 231
S ++++ + + Y +I+ + +EA D++ +
Sbjct: 297 SLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNK 356
Query: 232 ------------MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
M+ +G +N+L++ YCK AY LL +MEK + +
Sbjct: 357 KQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVY 416
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR---------------LGKD 324
ILI +C G + G + F+ +AYN ++ L
Sbjct: 417 NILIGSICSGGELPGP---------VTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF 467
Query: 325 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
GK + A V M V D+ TYS ++ LC A R+ +A L +GV
Sbjct: 468 GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTY 527
Query: 381 KAVVDGLRHSGCRREA 396
++D +G ++A
Sbjct: 528 TILIDCFSKAGIIKQA 543
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C D Y +L M++ V +Y +I G R +LS L LL+E+ +
Sbjct: 825 VLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILS--LGLLEEVEKN 882
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT--- 117
G P + Y L+ + G+ + A + +++I ++ TA N+ + + Y
Sbjct: 883 GSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMS-MTAKKNLYTSLIYSFSYASKI 941
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 157
D+A +F + + G +P+L T+ L+ GL +R RW
Sbjct: 942 DHAFELFYDMIRDGVIPDLGTFVHLLMGL-----IRVRRW 976
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Query: 3 IDAYCQFVS-----FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 57
+ +YC+ + F +L + + G +P ++ Y LI + L +L+L E+
Sbjct: 855 VSSYCKVIEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEV 914
Query: 58 LE--MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
+ M + Y SL++ K D A +F DMI + P TF +L GL + R
Sbjct: 915 ISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVR 974
Query: 116 YTDNALRM 123
+ AL++
Sbjct: 975 RWEEALQL 982
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 171/332 (51%), Gaps = 1/332 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL-LSCSLDLLDEMLEM 60
LI AY + D + M+ +G+ P++VTYN++I + + + + ++ DEML
Sbjct: 226 LISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRN 285
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD ++NSL+ + G + A +F +M+ + T+N +L+ +CK D A
Sbjct: 286 GVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLA 345
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + + +P +VTY+ +I G KAGRL A + E+ + + ++Y T++
Sbjct: 346 FQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSI 405
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ +++ L + M+ G D Y ++ + K G+ +E E+M + + +
Sbjct: 406 YAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPN 465
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++Y+TLI++Y K G + A + E +K G + D ++ LID LCK G ++ A L+
Sbjct: 466 LLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLD 525
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
M K G N+ YN I+D G+ G + I+
Sbjct: 526 EMTKEGIRPNVVTYNSIIDAFGRSGSAECVID 557
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 160/345 (46%), Gaps = 5/345 (1%)
Query: 52 DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 111
++ + L G V+++++L+ + G DEA +VF+ M L P T+N +++
Sbjct: 206 NVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDAC 265
Query: 112 CKNRYTDN-ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
K N A +F + ++G P+ +T+N L+ + G AR + E+ G +
Sbjct: 266 GKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQD 325
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
TY T++ + + L +I+S M RK + Y TVI + K GRL EA +
Sbjct: 326 IFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFN 385
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+M + LD VSYNTL+++Y K G+ E A + EME G + D T+ L+ G K G
Sbjct: 386 EMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQG 445
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 346
+ + E M NL Y+ ++D K G A+ VF + D YS
Sbjct: 446 KYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYS 505
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+++ LCK + SA L K G+R +++D SG
Sbjct: 506 ALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSG 550
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 179/369 (48%), Gaps = 4/369 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M E G+ D V Y +L+ G + + +L + E++E + PD YN ++CL +LGK
Sbjct: 530 MGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGK 589
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
EA ++M L P AT+N M++ C+ T AL++ ++ P L+TY
Sbjct: 590 FSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTT 649
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
L+ GL +AG + A+++L E+ +G P +TY +++ C +R + LE+ M G
Sbjct: 650 LVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAG 709
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
D Y T++ G ++AT +++M+ G+ D +++N LI +CK L+ A+
Sbjct: 710 LHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAF 769
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+M QG + T L+ GL AG I A + M K+G + N Y+ +V
Sbjct: 770 ATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGY 829
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
K A+ ++ M K + TY+S++ + KA + A +L + GV
Sbjct: 830 AKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTS 889
Query: 378 SAQKAVVDG 386
S +++G
Sbjct: 890 STYDILLNG 898
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 184/377 (48%), Gaps = 4/377 (1%)
Query: 31 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 90
VV +N+LI G + ++ +L +++ M G+ DV YN+L+ F G D A V +
Sbjct: 189 VVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAE 248
Query: 91 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 150
M + P T ++ CK + + A ++ G+ + G +P++VT + L+ GLC+ G
Sbjct: 249 RMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDG 308
Query: 151 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
R A + +E+ G APN +TY T + + ++ L +L M +G D Y
Sbjct: 309 RFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYT 368
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
TV+ K G+++EA D + ++D + + V+Y L++ +C+ G ++ A +L +ME++
Sbjct: 369 TVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEK 428
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
+ T + +++GL K G I A ++ M G N+ Y ++D K + A
Sbjct: 429 SVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAA 488
Query: 331 INVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
++V+ M ++F S+V+ L K + A L + G+ + ++DG
Sbjct: 489 LDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDG 548
Query: 387 LRHSGCRREAKKIQSKI 403
L +G A K+ ++
Sbjct: 549 LFKTGNMPAALKVGQEL 565
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 188/375 (50%), Gaps = 4/375 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+ F Y + M + G++P+ VTY + I + ++ SL LL EM+ G
Sbjct: 300 LVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRG 359
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D+ Y ++M L + GK +EA V + + ++TP T+ ++++ C+ D A
Sbjct: 360 VAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAE 419
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+M +++ P +VT++ ++ GL K G + A ++++ DSG APN +TY T++
Sbjct: 420 QMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGF 479
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ + + L++ M +G + F +++ K G ++EA + M G+ LD
Sbjct: 480 FKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDH 539
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y TL++ K G + AA + E+ ++ D + + I+ LC+ G A+ L+
Sbjct: 540 VNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKE 599
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSF-TYSSMVHNLCKAKR 357
M G + + YN ++ ++G A+ + M+ +K + TY+++V L +A
Sbjct: 600 MRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGV 659
Query: 358 LPSASKLLLSCLKSG 372
+ A LL +G
Sbjct: 660 VEKAKYLLNEMASAG 674
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 191/404 (47%), Gaps = 6/404 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+DA+C+ + D +L +M E +SP+VVT++S++ G + ++ + + +M +
Sbjct: 404 VLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDS 463
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+V +Y +L+ F+ + A V++DM+ + + ++NGL KN + A
Sbjct: 464 GIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEA 523
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ + + G + + V Y L+ GL K G + A + +EL + +P+A+ Y + C
Sbjct: 524 EALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINC 583
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R K+ L M+ G D Y T+I+A + G +A + +M ++ +
Sbjct: 584 LCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPN 643
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL- 299
+++Y TL+ + G +E A LL+EM GF T+ ++ C L +
Sbjct: 644 LITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQA-CSGSRSPYVILEVH 702
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
E M G +++ YN +V L G A V + M D+ T+++++ CK+
Sbjct: 703 ELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKS 762
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L +A L G+ + ++ GL +G EA +
Sbjct: 763 SHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTV 806
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 202/446 (45%), Gaps = 39/446 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ A ++ RM G+S DVV YN+L+AG + + ++ + M G
Sbjct: 195 LIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADG 254
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P V ++ +L+ ++ + +EA +++ M+ + P T + +++GLC++ A
Sbjct: 255 VEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAY 314
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE-------------------L 162
+FR + K G P VTY I L K R+ + +L E L
Sbjct: 315 ALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRL 374
Query: 163 GDSG----------HA------PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
G G HA PN +TYT ++ R ++L M+ K + +
Sbjct: 375 GKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNV 434
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ +++ VK G + +A YM +M G+ ++V+Y TLI+ + K EAA + +
Sbjct: 435 VTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRD 494
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M +G E + + L++GL K GNI+ A + M + G + Y ++D L K G
Sbjct: 495 MLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGN 554
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+ A+ V + + + D+ Y+ ++ LC+ + A L +G+ ++
Sbjct: 555 MPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNT 614
Query: 383 VVDGLRHSGCRREAKKIQSKIRMAKI 408
++ G +A K+ ++++ + I
Sbjct: 615 MISAQCREGNTSKALKLLNEMKWSSI 640
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 171/404 (42%), Gaps = 41/404 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ I+ C+ F + L MR G+ PD TYN++I+ R S +L LL+EM
Sbjct: 579 VFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWS 638
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P++ +Y +L+ L + G ++A + +M TP T+ +L +R
Sbjct: 639 SIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVI 698
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + G ++ YN L+ LC G R A +L E+ G AP+ IT+ ++
Sbjct: 699 LEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALI-- 756
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
G+C K L A QM+ G+ +
Sbjct: 757 --------------------------LGHC-------KSSHLDNAFATYAQMLHQGLSPN 783
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHL 299
I ++NTL+ G++ A ++ EM+K G E + T+ IL+ G K N ++ RL+
Sbjct: 784 IATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYC 843
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
E ++K GF YN ++ K G ++ A +F M+ + S TY +++ K
Sbjct: 844 EMVSK-GFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKL 902
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ LL + G + K ++ G EA+++
Sbjct: 903 RNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRL 946
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 189/441 (42%), Gaps = 43/441 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMR--EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
+I +YC + ++L + ++ D V+YN +AG + + +L EM +
Sbjct: 86 IILSYCSLHALRPALSLLRSSSGPQPQVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCK 145
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG----------------------DL 97
G+P D + ++ + L + G EA + + ++ G D+
Sbjct: 146 RGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDM 205
Query: 98 TPCTAT---------------FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
A +N ++ G + D A + ++ G P +VT+ L
Sbjct: 206 AAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTL 265
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
I CK R+ A + + + SG P+ +T + ++ R+ ++ + M + G
Sbjct: 266 IGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGV 325
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
+ YCT I + K+ R+ E+ + +MV+ GV +D+V Y T+++ KEGK+E A
Sbjct: 326 APNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKD 385
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
+L + T+T+L+D C+AGNI GA L M + N+ ++ I++ L
Sbjct: 386 VLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLV 445
Query: 323 KDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
K G I A M+ + TY +++ K + +A + L GV
Sbjct: 446 KRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNF 505
Query: 379 AQKAVVDGLRHSGCRREAKKI 399
++V+GLR +G EA+ +
Sbjct: 506 IVDSLVNGLRKNGNIEEAEAL 526
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 138/288 (47%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+LN M AG +P +TY ++ + + L++ + M+ G+ D+ YN+L+H L
Sbjct: 666 LLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLC 725
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
G +A V +M+ + P T TFN ++ G CK+ + DNA + + G P +
Sbjct: 726 CHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIA 785
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
T+N L+ GL AGR+ A ++ E+ G PN +TY ++ + L + M
Sbjct: 786 TFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEM 845
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
KG+ Y ++I+ F K G + +A + +M GV +Y+ L+N + K
Sbjct: 846 VSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNG 905
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
+LL +M++ GF+ K T + + K G AR L+ + K+
Sbjct: 906 TEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTLFKV 953
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 107/249 (42%), Gaps = 16/249 (6%)
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAP----NAITYTTIMKCCFRNRKYKLGLE 192
+T N +I C LR A +L+ SG P + ++Y + +L
Sbjct: 81 LTLNSIILSYCSLHALRPALSLLRS--SSGPQPQVAADTVSYNIFLAGLSEQGHGRLAPP 138
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV----TDGVQLDIVSYNTLI 248
+LS M ++G +DG T + + G + EA E +V DG L +V +N LI
Sbjct: 139 VLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDG--LGVVGWNALI 196
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
+ YCK + AA +++ M QG D + L+ G +G+ A E M G +
Sbjct: 197 DGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVE 256
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKL 364
++ + ++ K +I+ A ++E M + D T S++V LC+ R A L
Sbjct: 257 PSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYAL 316
Query: 365 LLSCLKSGV 373
K GV
Sbjct: 317 FREMDKIGV 325
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 75/146 (51%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
T++ M++ G+ P+ +TY+ L+ G + S +L L EM+ G P +YNSL+
Sbjct: 805 TVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDF 864
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ G ++A +F +M + ++T++I+LNG K R + + +++ GF P
Sbjct: 865 AKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSK 924
Query: 137 VTYNILIKGLCKAGRLRTARWILKEL 162
T + + + K G AR +LK L
Sbjct: 925 GTISSMSRAFSKPGMTWEARRLLKTL 950
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 177/333 (53%), Gaps = 10/333 (3%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
+++A P VTYNSLI+G + S + DLL+EM+ G PD+++Y +L+ + K
Sbjct: 45 VQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 104
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF-VPELVTYN 140
D+A RVF+ ++ P T++ +++GLCK A+ +F + K G +P VTYN
Sbjct: 105 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 164
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
LI G C+ G++ A +L+ + ++G +P+ +TYTT+M + + ++L+ M RK
Sbjct: 165 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 224
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G T + + +++ + RL +A + +M + +YNT+++ YC+ +LE A
Sbjct: 225 GLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEA 284
Query: 261 Y-LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
+L+EM+ + + I+I GLCK A +E + + ++ Y ++D
Sbjct: 285 RKFMLEEMDCPP---NVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVID 341
Query: 320 RLGKDGKIDHAINVFESME-----VKDSFTYSS 347
L ++ K+D A V+ M + +S TYS+
Sbjct: 342 VLCREKKVDEACRVYRKMLEEPGCLPNSITYST 374
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 161/317 (50%), Gaps = 6/317 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ Y +L M +G PD+ TY +LI G ++ +L + ++++ G
Sbjct: 60 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 119
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV +Y+ L+ L + G+ EA +F MI G P T T+N +++G C+ D A
Sbjct: 120 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 179
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + + G P++VTY L+ G CK RL A +L ++ G PN +T+T++M
Sbjct: 180 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDG 239
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM-EQMVTDGVQL 239
R + + IL M+RK + + Y T++ + ++ +L+EA +M E+M
Sbjct: 240 LCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEM---DCPP 296
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLH 298
++VS+N +I CK + A L++E ++ D +T +ID LC+ + A R++
Sbjct: 297 NVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVY 356
Query: 299 LEYMNKIGFDSNLEAYN 315
+ + + G N Y+
Sbjct: 357 RKMLEEPGCLPNSITYS 373
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 130/246 (52%), Gaps = 5/246 (2%)
Query: 126 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 185
+Q VP VTYN LI GLCKA R A +L+E+ SG P+ TYTT++ +++
Sbjct: 44 AVQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSK 103
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL-DIVSY 244
K L + + +G+ D Y +I K GRLKEA D +M+ G + + V+Y
Sbjct: 104 KSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTY 163
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
N+LI+ +C+ GK++ A LL+ M + G D T+T L++G CK + A L M +
Sbjct: 164 NSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTR 223
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPS 360
G N+ + ++D L ++ ++ A+++ M K +TY++++ C+ +L
Sbjct: 224 KGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEE 283
Query: 361 ASKLLL 366
A K +L
Sbjct: 284 ARKFML 289
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 124/248 (50%), Gaps = 4/248 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
LID C+ + RM ++G P+ VTYNSLI+G R + +++LL+ M E
Sbjct: 130 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 189
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +Y +LM+ +L + D+A + M LTP TF +++GLC+ +A
Sbjct: 190 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDA 249
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + +++ P + TYN ++ G C+ +L AR + E D PN +++ +++
Sbjct: 250 VHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMDC--PPNVVSFNIMIRG 307
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQL 239
+ + +E++ +R+ D Y TVI + ++ EA +M+ + G
Sbjct: 308 LCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLP 367
Query: 240 DIVSYNTL 247
+ ++Y+T
Sbjct: 368 NSITYSTF 375
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 94/184 (51%), Gaps = 5/184 (2%)
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y ++I+ K R EA D +E+MV G DI +Y TLI +CK K + A + +++
Sbjct: 57 YNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV 116
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF-DSNLEAYNCIVDRLGKDGKI 327
+GF D T++ LIDGLCK G +K A M K G N YN ++ + GK+
Sbjct: 117 ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 176
Query: 328 DHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
D A+N+ E M D TY+++++ CK RL A LL + G+ ++
Sbjct: 177 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSL 236
Query: 384 VDGL 387
+DGL
Sbjct: 237 MDGL 240
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 5/136 (3%)
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN+LI+ CK + AY LL+EM G D +T+T LI G CK+ A E
Sbjct: 55 VTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQ 114
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-----VKDSFTYSSMVHNLCKAK 356
+ GF ++ Y+C++D L K+G++ AI++F M + ++ TY+S++ C+
Sbjct: 115 LVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMG 174
Query: 357 RLPSASKLLLSCLKSG 372
++ A LL ++G
Sbjct: 175 KMDEAMNLLERMAETG 190
>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 418
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 141/284 (49%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E LE G P ++ +N LMH + G+ A VF + L P +FN ++NG K
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ +Q G P++ TY++LI GLCK ++ A + E+ D+G PN +T+
Sbjct: 185 GDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A D ++M
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG LE A+ M K+ D +T LI GLC+ G
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K G + + + M+
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 140/256 (54%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + + + G+ P VV++N+L+ G + L L + M G+ PDV++Y+ L++ L
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGL 216
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ K D+AN +F +M+ L P TF +++G CKN D A+ +++ + P+L
Sbjct: 217 CKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+TYN LI GLCK G L+ A+ + E+ G P+ ITYTT++ + + E
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKR 336
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M ++ D Y +I+ + GR +A + +M++ G++ +I +Y +IN +CK+G
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396
Query: 257 LEAAYLLLDEMEKQGF 272
+ LL EM++ G+
Sbjct: 397 VWTGSKLLKEMQRDGY 412
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 146/284 (51%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + G+ P V S+N+LM+ +LG D
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLD 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M + P T+++++NGLCK D+A +F + +G VP VT+ LI
Sbjct: 189 EGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I K++ +P+ ITY T++ + K ++ M KG
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A +Y ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
L EM G + + T+T++I+ CK G++ L+ M + G+
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 137/300 (45%), Gaps = 4/300 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F+ ++ ++ + +A+ +R ++H F T +J+ L K + +E
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWGFYEESL 128
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+ G+ + + +M + + +L + A+ + G + T++ ++K+G L
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLD 188
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
E M GVQ D+ +Y+ LIN CKE K++ A L DEM G + T T LI
Sbjct: 189 EGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
DG CK G + A + M +L YN ++ L K G + A ++ + M +K
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLK 308
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D TY++++ CK L +A + +K +R+ A A++ GL G +A+K+
Sbjct: 309 PDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ D + + M + G+ P+ VT+ +LI G +N + ++++ +ML
Sbjct: 211 VLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+ +YN+L++ L + G +A + +M L P T+ +++G CK + + A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETA 330
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K + V Y LI GLC+ GR A +L+E+ G P TYT I+
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 181 CFRNRKYKLGLEILSAMKRKGY 202
+ G ++L M+R GY
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGY 412
>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g55840-like [Cucumis sativus]
Length = 1079
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 179/378 (47%), Gaps = 6/378 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ F +++ M GI DV TYN I RNS + +L +M
Sbjct: 216 LLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKM 275
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+ SYN+L++ + GK A RVF +MI +L+P T+NI++NG C N + AL
Sbjct: 276 ITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEAL 335
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ ++ + P VT L+ GL K+ + AR IL+ + + N I++T ++
Sbjct: 336 RLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGL 395
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
RN ++L M + G D + +I F K+G L +A + M ++ +G +
Sbjct: 396 CRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNN 455
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V ++TLI CK G + M G D +T L+ LC+ G + A L +
Sbjct: 456 VIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHH 515
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
+++IG N ++CI++ G A +VF+ M FTY S++ LCK +
Sbjct: 516 ISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQN 575
Query: 358 LPSASKLL--LSCLKSGV 373
A KLL L C+ V
Sbjct: 576 FWEARKLLKKLHCIPLAV 593
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 166/354 (46%), Gaps = 14/354 (3%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
S + ++ LI R ++ +++ ML G P V++ N +M + + +
Sbjct: 102 SSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWX 161
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
F+ M+ + P ++FNI+++ LC A+ + ++++G+VP +V+YN L+ C
Sbjct: 162 FFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCC 221
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K GR + A ++ + G + TY + RN + G +L M+ K T +
Sbjct: 222 KKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEV 281
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y T+I FVK G++ AT +M+ + ++++YN LIN YC G E A LLD M
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVM 341
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI-----VDRLG 322
E ++ T L++GL K+ AR LE + N + NCI +D L
Sbjct: 342 EANDVRPNEVTIGTLLNGLYKSAKFDVARNILER-----YSINRTSLNCISHTVMIDGLC 396
Query: 323 KDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++G +D A + M D T+S +++ CK L A +++ + G
Sbjct: 397 RNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREG 450
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 181/396 (45%), Gaps = 5/396 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ D + +L M + G+ PD++T++ LI G + L+ + +++ ++
Sbjct: 390 VMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYRE 449
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ +++L++ ++G E + + M T N ++ LC+N A
Sbjct: 450 GFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEA 509
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G VP VT++ +I G G A + ++ GH P+ TY +++K
Sbjct: 510 EEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKV 569
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + ++L + D Y T+I K G L EA E+M+ + + D
Sbjct: 570 LCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPD 629
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDE-MEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+Y +++ +EG+L A++ L M+K+ + +T IDGL KAG K A
Sbjct: 630 SYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLF 689
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKA 355
+ M + G +L A N I D + GK+ A ++ K+ T++ ++H +
Sbjct: 690 KEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRG 749
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ + S KL +SG + +++ GL + G
Sbjct: 750 QDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHG 785
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 182/435 (41%), Gaps = 75/435 (17%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ + + + N M E +SP+++TYN LI G N +L LLD M
Sbjct: 286 LINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEAND 345
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRV--------------------------------F 89
+ P+ + +L++ L++ K D A + F
Sbjct: 346 VRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAF 405
Query: 90 QDMI--CGD-LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
Q +I C D + P TF++++NG CK + A + + + GFVP V ++ LI
Sbjct: 406 QLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNS 465
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK G + G++ +AM G D
Sbjct: 466 CKVGNVYE-----------------------------------GMKFYAAMNLNGQNADN 490
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
F +++A+ + G+L EA +++ + G+ + V+++ +IN Y G A+ + D+
Sbjct: 491 FTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDK 550
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M G +T+ L+ LCK N AR L+ ++ I + +YN ++ + K G
Sbjct: 551 MISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGN 610
Query: 327 IDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS-AQK 381
+ A+ +FE M + DS+TY+ ++ L + RL A L ++ + L S
Sbjct: 611 LLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYT 670
Query: 382 AVVDGLRHSGCRREA 396
+DGL +G + A
Sbjct: 671 CFIDGLFKAGQSKAA 685
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 175/406 (43%), Gaps = 46/406 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ +F +L ++ ++ D ++YN+LI +++ L ++ L +EM++
Sbjct: 566 LLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNN 625
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEA----NRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
I PD ++Y ++ L + G+ A R+ Q I LT + + ++GL K +
Sbjct: 626 ILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEI---LTLNSIVYTCFIDGLFKAGQS 682
Query: 118 DNALRMFRGLQKHGF-----------------------------------VPELVTYNIL 142
AL +F+ +++ G +P L T+NIL
Sbjct: 683 KAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNIL 742
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
+ G + + + + + SG PN +TY +++ + +LG+++L +
Sbjct: 743 LHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESS 802
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
T D + +I +I L + D M V LD + + ++ + + ++
Sbjct: 803 TIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFV 862
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
+ EM K+GF + ++ +C+ G+I+GA + M +G + A +V L
Sbjct: 863 FMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLA 922
Query: 323 KDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKL 364
GKI+ A+ + + M ++ + T+++++H CK A L
Sbjct: 923 LCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNL 968
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/320 (19%), Positives = 134/320 (41%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ D Y + + +++++ R + P++ T+N L+ G +R + L + M G
Sbjct: 707 ITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSG 766
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y+SL+ L G + ++ + I T TFN+++ C+ D +
Sbjct: 767 FFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVI 826
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++ + T + L + + + E+ G P + Y T+MK
Sbjct: 827 DLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRM 886
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + ++ M G + D C ++ G+++EA +++M+
Sbjct: 887 CRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTT 946
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++ TL++++CK+ + A+ L ME + D + +LI C G++ A E
Sbjct: 947 STFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEE 1006
Query: 302 MNKIGFDSNLEAYNCIVDRL 321
+ + G N+ Y +V +
Sbjct: 1007 IKQKGLLPNMTTYRVLVSAI 1026
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 134/309 (43%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ Y + + + + N MR +G P+ +TY+SLI G + +L + +L +
Sbjct: 741 ILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAE 800
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
D ++N L+ ++ D+ + +M ++ T + + L + + N
Sbjct: 801 SSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNY 860
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ K GF+P Y ++K +C+ G ++ A + ++ G + + +++
Sbjct: 861 FVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRG 920
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K + + IL M R + T++ F K KEA + M V+LD
Sbjct: 921 LALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLD 980
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+YN LI+ C G + A +E++++G + T+ +L+ + + + L+
Sbjct: 981 IVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLK 1040
Query: 301 YMNKIGFDS 309
+N G S
Sbjct: 1041 DLNDRGLVS 1049
>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 418
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 141/284 (49%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E LE G P ++ +N LMH + G+ A VF + L P +FN ++NG K
Sbjct: 125 EESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ +Q G P++ TY++LI GLCK ++ A + E+ ++G PN +T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A D ++M
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG LE A+ M K+ D +T LI GLC+ G
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K G + + + M+
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 140/256 (54%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + + + G+ P VV++N+L+ G + L L + M G+ PDV++Y+ L++ L
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ K ++AN +F +M+ L P TF +++G CKN D A+ +++ + P+L
Sbjct: 217 CKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+TYN LI GLCK G L+ A+ + E+ G P+ ITYTT++ + + E
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKR 336
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M ++ D Y +I+ + GR +A + +M++ G++ +I +Y +IN +CK+G
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396
Query: 257 LEAAYLLLDEMEKQGF 272
+ LL EM++ G+
Sbjct: 397 VWTGSKLLKEMQRDGY 412
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 146/284 (51%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + G+ P V S+N+LM+ +LG D
Sbjct: 129 EYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLD 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M + P T+++++NGLCK ++A +F + +G VP VT+ LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I K++ +P+ ITY T++ + K ++ M KG
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A +Y ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
L EM G + + T+T++I+ CK G++ L+ M + G+
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 137/300 (45%), Gaps = 4/300 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F+ ++ ++ + +A+ +R ++H F T +I+ L K + +E
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGFYEESL 128
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+ G+ + + +M + + +L + A+ + G + T++ ++K+G L
Sbjct: 129 EYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLD 188
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
E M GVQ D+ +Y+ LIN CKE K+E A L DEM G + T T LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLI 248
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
DG CK G + A + M +L YN ++ L K G + A ++ + M +K
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLK 308
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D TY++++ CK L +A + +K +R+ A A++ GL G +A+K+
Sbjct: 309 PDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 125/250 (50%), Gaps = 4/250 (1%)
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
++G+ L +NIL+ K G +R A+ + + G P+ +++ T+M +
Sbjct: 129 EYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLD 188
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
G + +AM+ G D + Y +I K ++++A + ++M+ +G+ + V++ TLI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLI 248
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
+ +CK G+++ A + +M Q D T+ LI GLCK G++K A+ + M+ G
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLK 308
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
+ Y ++D K+G ++ A + M + D Y++++ LC+ R A K+
Sbjct: 309 PDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 365 LLSCLKSGVR 374
L L G++
Sbjct: 369 LREMLSVGLK 378
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 39/238 (16%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ Y + D G+ + N M+ +G+ PDV TY+ LI G + S + + +L DEML G
Sbjct: 177 LMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNG 236
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ P+ ++ +L+ HC + G+ D A +++ M+ L+P T+N ++ GLCK
Sbjct: 237 LVPNGVTFTTLIDGHC--KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQ 294
Query: 120 ALRMFRGLQKHGFVPELVTYNIL-----------------------------------IK 144
A + + G P+ +TY L I
Sbjct: 295 AQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALIS 354
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
GLC+ GR A +L+E+ G P TYT I+ + G ++L M+R GY
Sbjct: 355 GLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 191/437 (43%), Gaps = 65/437 (14%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML--- 58
L+ ++C+ D ++ RM E G+ PDVVT+NS I+ R + + + +M
Sbjct: 225 LVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDG 284
Query: 59 EMGIP-PDV-----------------------------------WSYNSLMHCLFQLGKP 82
E+G+P P+V SYN+ + L + GK
Sbjct: 285 ELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKL 344
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
E V +M+ + P ++NI+++GLC+N +A R+ + +G P+ VTY L
Sbjct: 345 LEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTL 404
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
+ G C G++ A+ IL E+ G PN T T++ ++ + E+L M K Y
Sbjct: 405 LHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSY 464
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ----------------------LD 240
D V+ + G L++A++ + +M TDG D
Sbjct: 465 QLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPD 524
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++Y TLIN CK GKLE A EM + D T+ + CK G I A L+
Sbjct: 525 VITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLK 584
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + G L+ YN ++ LG G+I + + M + D TY++M++ LC+
Sbjct: 585 DMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGG 644
Query: 357 RLPSASKLLLSCLKSGV 373
+ A+ LL L GV
Sbjct: 645 KTKDATSLLHEMLDKGV 661
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 187/402 (46%), Gaps = 50/402 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATR----------------- 43
+LI + C+ + D + ++M E G P+ T L+ G R
Sbjct: 156 LLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALEFVDGKMGG 215
Query: 44 -------NSLLS--CSLDLLDE-------MLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
N+L+S C D+ DE M E G+ PDV ++NS + L + GK EA+R
Sbjct: 216 NVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASR 275
Query: 88 VFQDM-ICGDL---TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+F+DM + G+L P TFN+ML G C+ + A + ++K G L +YN +
Sbjct: 276 IFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWL 335
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
GL + G+L R +L E+ ++G PN +Y +M RN ++ M G
Sbjct: 336 LGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVY 395
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T++ + G++ EA + +M+ G + + NTL+N KEG+ A +
Sbjct: 396 PDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEM 455
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
L +M ++ ++ D T I+++GLC+ G ++ A + M G +S LGK
Sbjct: 456 LQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNS-----------LGK 504
Query: 324 DGKIDHAINVFE--SMEVKDSFTYSSMVHNLCKAKRLPSASK 363
+ + +N S V D TY+++++ LCK +L A K
Sbjct: 505 ENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKK 546
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 203/434 (46%), Gaps = 30/434 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D C+ +++ M G+ PD VTY +L+ G + + +L+EM+
Sbjct: 368 IVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRK 427
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ ++ N+L++ L++ G+ EA + Q M T T NI++NGLC+N + A
Sbjct: 428 GCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKA 487
Query: 121 LRMFRGLQKHGF----------------------VPELVTYNILIKGLCKAGRLRTARWI 158
+ + G VP+++TY LI GLCK G+L A+
Sbjct: 488 SEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKK 547
Query: 159 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 218
E+ P+++TY T + + K L +L M+R G + Y ++I
Sbjct: 548 FIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGS 607
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF-ECDKY 277
G++ E M++M G+ DI +YN +IN C+ GK + A LL EM +G +
Sbjct: 608 KGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVS 667
Query: 278 THTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE- 335
+ ILI CK+G+ K A L ++ G L Y+ + + L GK+ A +FE
Sbjct: 668 SFKILIKAFCKSGDFKVACELFDVALSVCGHKEAL--YSLMFNELLAGGKLSDAKELFEA 725
Query: 336 SME---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 392
S+E + +F Y ++ LCK RL A LL + G S+ V+DGL G
Sbjct: 726 SLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGN 785
Query: 393 RREAKKIQSKIRMA 406
+++A ++ + +A
Sbjct: 786 KQQADELGRIMELA 799
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 161/335 (48%), Gaps = 10/335 (2%)
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
Q +P ++ DMI + P T TFN+++ LC++ D+A +F + + G P
Sbjct: 127 LQQNRPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNK 186
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
T IL++G C+AGR + A + G G N + Y T++ + +++
Sbjct: 187 FTVGILVRGFCRAGRTKQALEFVD--GKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVER 244
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG----VQLDIVSYNTLINLYC 252
M KG D + + I+A + G++ EA+ M DG + ++V++N ++ +C
Sbjct: 245 MTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFC 304
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
+EG +E A L++ M+K G ++ + GL + G + R L+ M + G + N+
Sbjct: 305 QEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIY 364
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 368
+YN ++D L ++ + A + + M D+ TY++++H C ++ A +L
Sbjct: 365 SYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEM 424
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++ G +++ L G + EA+++ K+
Sbjct: 425 IRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKM 459
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 184/412 (44%), Gaps = 40/412 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
I CQ DA ++ R+ + G PDVVTYN LI G +NS + L +++
Sbjct: 256 FFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNE 315
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD ++YN+L+ + G A R+ + + P T+ +++GLC T+ A
Sbjct: 316 GLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRA 375
Query: 121 LRMF-------------------RGLQKHGFV----------------PELVTYNILIKG 145
L +F +GL G + PE+ T+NIL+ G
Sbjct: 376 LALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNG 435
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCK G + A ++K + G+ P+ T+ ++ K + LEIL M G D
Sbjct: 436 LCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPD 495
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ Y +++ K + ++ + + MV G ++ ++N L+ C+ KL+ A LL+
Sbjct: 496 VYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLE 555
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS-NLEAYNCIVDRLGKD 324
EM+ + D T LIDG CK G++ GA M ++ S + YN I+ +
Sbjct: 556 EMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEK 615
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
+ A +F+ M + D +TY MV CK + K LL +++G
Sbjct: 616 LNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENG 667
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 184/380 (48%), Gaps = 4/380 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
FD + + RMR+ GI+PDV ++ + R S +L LL+ M G +V +Y +
Sbjct: 127 FDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCT 186
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
++ ++ DE +F M+ ++ C +TFN +L+ LCK ++ + K G
Sbjct: 187 VVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRG 246
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
+P L TYN I+GLC+ G L A ++ L D G P+ +TY ++ +N K++
Sbjct: 247 VLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAE 306
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
L + +G D F Y T+IA + K G ++ A + V +G D +Y +LI+
Sbjct: 307 VYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGL 366
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
C EG+ A L +E +G + + + LI GL G I A M++ G +
Sbjct: 367 CHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEV 426
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLS 367
+ +N +V+ L K G + A + + M K D FT++ ++H ++ +A ++L
Sbjct: 427 QTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDV 486
Query: 368 CLKSGVRILKSAQKAVVDGL 387
+ +GV ++++GL
Sbjct: 487 MMDNGVDPDVYTYNSLLNGL 506
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 184/396 (46%), Gaps = 4/396 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C + + N GI P+V+ YN+LI G + L+ + L EM E G
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKG 421
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V ++N L++ L ++G +A+ + + MI P TFNI+++G +NAL
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +G P++ TYN L+ GLCK + K + + G APN T+ +++
Sbjct: 482 EILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV-TDGVQLD 240
R K L +L MK K D + T+I F K G L A +M V
Sbjct: 542 CRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCS 601
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK-GARLHL 299
+YN +I+ + ++ + A L EM + D YT+ +++DG CK GN+ G + L
Sbjct: 602 TPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLL 661
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLP 359
E M GF +L +++ L + ++ A + M V+ ++ K+
Sbjct: 662 EMMEN-GFIPSLTTLGRVINCLCVEDRVYEAAGIIHRM-VQKGLVPEAVNTIFDHDKKEV 719
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
+A KL+L L I A + + DGLR R++
Sbjct: 720 AAPKLVLEDLLKKSCITYYAYELLFDGLRDKRLRKK 755
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 172/359 (47%), Gaps = 4/359 (1%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
+ ++C+ A +LN M G +VV Y +++ G + +L +ML G+
Sbjct: 153 MKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGV 212
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
+ ++N L+H L + G E ++ +I + P T+N + GLC+ D A+R
Sbjct: 213 SLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVR 272
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
M L G P++VTYN LI GLCK + + A L +L + G P++ TY T++
Sbjct: 273 MVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYC 332
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ +L IL G+ D F Y ++I G A + + G++ +++
Sbjct: 333 KGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
YNTLI +G + A L EM ++G + T IL++GLCK G + A ++ M
Sbjct: 393 LYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
G+ ++ +N ++ K+++A+ + + M D +TY+S+++ LCK +
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSK 511
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 176/399 (44%), Gaps = 20/399 (5%)
Query: 18 ILNRMR-EAGISPDVVTYNSLIAG--------ATRNSLLSCSLDLLDEMLEMGIPPDVWS 68
+ N MR E G + TY S+I A L+ ++ + MLE G+
Sbjct: 26 MFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLE-GV------ 78
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
Y M + GK EA VF+ M D P ++N +++ L + Y D A +++ ++
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMR 138
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
G P++ ++ I +K C+ R A +L + G N + Y T++ +
Sbjct: 139 DRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKD 198
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
G E+ M G + + ++ K G +KE +++++ GV ++ +YN I
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFI 258
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
C++G+L+AA ++ + QG + D T+ LI GLCK + A ++L + G +
Sbjct: 259 QGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLE 318
Query: 309 SNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKL 364
+ YN ++ K G + A +N + V D FTY S++ LC A L
Sbjct: 319 PDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALAL 378
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L G++ ++ GL + G EA ++ S++
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEM 417
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 130/276 (47%), Gaps = 7/276 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ C+ ++ M G PD+ T+N LI G + + +L++LD M++
Sbjct: 431 ILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDN 490
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++YNSL++ L + K ++ ++ M+ P TFNI+L LC+ D A
Sbjct: 491 GVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKA 550
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD----SGHAPNAITYTT 176
L + ++ P+ VT+ LI G CK G L A + +++ + S P TY
Sbjct: 551 LGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTP---TYNI 607
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
I+ + ++ M + DG+ Y ++ F K G + ++ +M+ +G
Sbjct: 608 IIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENG 667
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
+ + +IN C E ++ A ++ M ++G
Sbjct: 668 FIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGL 703
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 85/173 (49%), Gaps = 1/173 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+++ C++ D +L M+ ++PD VT+ +LI G +N L + L +M E+
Sbjct: 536 ILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEV 595
Query: 61 -GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ +YN ++H + A ++FQ+M+ L P T+ +M++G CK D
Sbjct: 596 YMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDL 655
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
+ + ++GF+P L T +I LC R+ A I+ + G P A+
Sbjct: 656 GYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 190/390 (48%), Gaps = 17/390 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+AY + + MR+ PD+ +N ++ R +L + ++ML+
Sbjct: 133 VLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKC 192
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PDV +Y L+H L + K +A +F +M + P ++I+L+GLC+ + +A
Sbjct: 193 NLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDA 252
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+F ++ G +L+TYN+L+ G CK+G L A +L+ L GH I Y ++
Sbjct: 253 QRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLING 312
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
FR R+Y+ M R+ D Y +I + GR+ EA + +M G++ D
Sbjct: 313 LFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPD 372
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ YN LI +C G L+ A L E+ K + +T++ILI G+CK G I A+ +
Sbjct: 373 TICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFK 432
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-----------------VKDSF 343
M K+G ++ +N +++ L K +++ A +F ME V D
Sbjct: 433 EMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIA 492
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ M+ LC++ + A KLL+ + SGV
Sbjct: 493 SLQVMMERLCESGMILKAYKLLMQLVDSGV 522
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 179/360 (49%), Gaps = 6/360 (1%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
+F+ + +L ++ + I ++ LI + + +++ M + PD++++N
Sbjct: 108 AFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFN 167
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
++H L + A V+ M+ +L P T+ I+++GLCK T +AL +F +
Sbjct: 168 LILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDR 227
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G +P + Y+I++ GLC+A ++ A+ + ++ SG + ITY ++ ++
Sbjct: 228 GILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDA 287
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+L + + G+ GY +I + R +EA + ++M+ + ++ D++ Y +I
Sbjct: 288 FTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRG 347
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLEYMNKIGFDS 309
+EG++ A LL EM ++G D + LI G C G + A L LE F +
Sbjct: 348 LSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPN 407
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
N Y+ ++ + K+G I+ A ++F+ ME + T++S+++ LCKA RL A L
Sbjct: 408 N-HTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLF 466
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 187/426 (43%), Gaps = 52/426 (12%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
+F + N+M + ++PDVVTY LI G + +L L DEM + GI P+ Y+
Sbjct: 178 AFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYS 237
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
++ L Q K +A R+F M T+N++LNG CK+ Y D+A + + L K
Sbjct: 238 IVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKD 297
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G + ++ Y LI GL +A R A +++ P+ + YT +++ + +
Sbjct: 298 GHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEA 357
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY---------------------- 228
L +L M +G D Y +I F +G L EA
Sbjct: 358 LTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICG 417
Query: 229 -------------MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME------- 268
++M G +V++N+LIN CK +LE A LL +ME
Sbjct: 418 MCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSL 477
Query: 269 ----KQGFE--CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
QG + D + ++++ LC++G I A L + G ++ YN +++
Sbjct: 478 FLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFC 537
Query: 323 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
K G I+ A +F+ M++K DS TY +++ L +A R A ++ +K G S
Sbjct: 538 KFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESS 597
Query: 379 AQKAVV 384
K ++
Sbjct: 598 TYKTIM 603
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 175/388 (45%), Gaps = 19/388 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ CQ + ++MR +G + D++TYN L+ G ++ L + LL + +
Sbjct: 238 IVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKD 297
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G V Y L++ LF+ + +EA+ +Q M+ ++ P + IM+ GL + A
Sbjct: 298 GHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEA 357
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + + G P+ + YN LIKG C G L A + E+ PN TY+ ++
Sbjct: 358 LTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICG 417
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV------- 233
+N I M++ G + ++I K RL+EA QM
Sbjct: 418 MCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSL 477
Query: 234 -------TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
TD V DI S ++ C+ G + AY LL ++ G D T+ ILI+G
Sbjct: 478 FLRLSQGTDKV-FDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGF 536
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDS 342
CK GNI GA + M G + Y ++D L + G+ + A+ +FE M V +S
Sbjct: 537 CKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPES 596
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLK 370
TY +++ C+ + A + + L+
Sbjct: 597 STYKTIMTWSCRENNISLALSVWMKYLR 624
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 156/348 (44%), Gaps = 18/348 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C D ++ + + P+ TY+ LI G +N L++ + + EM ++G
Sbjct: 379 LIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLG 438
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-------------GDLTPCTATFNIML 108
P V ++NSL++ L + + +EA +F M D A+ +M+
Sbjct: 439 CLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMM 498
Query: 109 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
LC++ A ++ L G +P++ TYNILI G CK G + A + KE+ GH
Sbjct: 499 ERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHM 558
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
P+++TY T++ +R + + LEI M +KG + Y T++ + + A
Sbjct: 559 PDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSV 618
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+ + D + + + E +L+ A L EM+ + D +TI + GL +
Sbjct: 619 WMKYLRDFRGWEDEKVRVVAESFDNE-ELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQ 677
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCI--VDRLGKDGKIDHAINVF 334
A A + F N+ + +C+ + RL +D A++VF
Sbjct: 678 AKRDCEAFAIFSVLKD--FKMNISSASCVMLIGRLCMVENLDMAMDVF 723
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 140/343 (40%), Gaps = 40/343 (11%)
Query: 33 TYNSLIAGA-TRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 91
T LI G + + +L E+ I +++ L+ + G ++A F
Sbjct: 94 TVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGL 153
Query: 92 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
M D P FN++L+ L + AL ++ + K P++VTY ILI GLCK +
Sbjct: 154 MRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCK 213
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
+ A + E+ D G PN I Y+ ++ G C
Sbjct: 214 TQDALVLFDEMTDRGILPNQIIYSIVLS----------------------------GLCQ 245
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
F +A +M G D+++YN L+N +CK G L+ A+ LL + K G
Sbjct: 246 AKKIF-------DAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDG 298
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
+ LI+GL +A + A + + M + ++ Y ++ L ++G++ A+
Sbjct: 299 HILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEAL 358
Query: 332 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
+ M + D+ Y++++ C L A L L K
Sbjct: 359 TLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISK 401
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 92/225 (40%), Gaps = 8/225 (3%)
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
R W LK S H I+ + ++L ++L +K +
Sbjct: 78 FRLFIWSLK----SWHLRCRTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSV 133
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+I A+ + G ++A + M + D+ ++N +++ ++ A + ++M K
Sbjct: 134 LIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCN 193
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
D T+ ILI GLCK + A + + M G N Y+ ++ L + KI A
Sbjct: 194 LNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQ 253
Query: 332 NVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
+F M +D TY+ +++ CK+ L A LL K G
Sbjct: 254 RLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDG 298
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 4/156 (2%)
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
KE E + +L E++ + ++LI+ +AG + A M +L
Sbjct: 105 KENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLF 164
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
A+N I+ L + A+ V+ M D TY ++H LCK + A L
Sbjct: 165 AFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEM 224
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
G+ + V+ GL + +A+++ SK+R
Sbjct: 225 TDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMR 260
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 175/365 (47%), Gaps = 4/365 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDA C+ + D +L M E ISP+VVT++S+I G + LL + + M E
Sbjct: 384 VLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKER 443
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+V +Y +L+ F+ D A V+ DM+C + + ++NGL +N + A
Sbjct: 444 GINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEA 503
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +F+ G + V Y LI GL KAG + TA +EL D P+A+ Y + C
Sbjct: 504 MALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINC 563
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K+K IL+ M+ G D Y T+I + + G +A + +M ++ +
Sbjct: 564 LCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPN 623
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++YNTL+ G +E A LL+EM GF TH ++ ++ + E
Sbjct: 624 LITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHE 683
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+M G +++ YN ++ L G A V E M D+ T+++++ CK+
Sbjct: 684 WMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSS 743
Query: 357 RLPSA 361
L +A
Sbjct: 744 HLDNA 748
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 182/385 (47%), Gaps = 11/385 (2%)
Query: 25 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 84
+G+S D V Y +LI G + + + E+++ + PD YN ++CL LGK E
Sbjct: 513 SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKE 572
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
A + +M L P +T+N M+ C+ T AL++ ++ P L+TYN L+
Sbjct: 573 AKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVA 632
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
GL G + A+++L E+ +G +P+++T+ +++ C ++R+ + L+I M G
Sbjct: 633 GLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHA 692
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D Y T++ G ++AT +E+M+ G+ D +++N LI +CK L+ A+
Sbjct: 693 DITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATY 752
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+M Q + T L+ GL G I A L M K G + N Y+ +V GK
Sbjct: 753 AQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQ 812
Query: 325 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR------ 374
A+ ++ M V TY++++ + KA + A +L K GV
Sbjct: 813 SNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTY 872
Query: 375 -ILKSAQKAVVDGLRHSGCRREAKK 398
IL S + +G C ++ K+
Sbjct: 873 DILVSGWSRIRNGTEVKKCLKDMKE 897
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 188/396 (47%), Gaps = 9/396 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISP-DVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L+ C+ DA + +R GI DV+ +N+LIAG R +L + D M
Sbjct: 141 LLAGLCRNGQVDAAAALADR--GGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQ 198
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+P DV YN+L+ + G+ D A V M + P AT+ + C+ + + A
Sbjct: 199 GLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEA 258
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ G+ ++G + ++VT + L+ GLC+ GR A + +E+ G PN +TY T++
Sbjct: 259 FDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDS 318
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + K L +L M +G D Y ++ K G+ E D + ++D + L+
Sbjct: 319 LAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLN 378
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+Y LI+ CK ++ A +L EME++ + T + +I+G K G + A +
Sbjct: 379 GVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKR 438
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF-----ESMEVKDSFTYSSMVHNLCKA 355
M + G + N+ Y ++D K D A+ V+ E +EV + F S+V+ L +
Sbjct: 439 MMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEV-NKFIVDSLVNGLRQN 497
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
++ A L SG+ + ++DGL +G
Sbjct: 498 GKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAG 533
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 123/483 (25%), Positives = 199/483 (41%), Gaps = 76/483 (15%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI YC+ A ++ +RM G+ DVV YN+L+AG R + + +LD M E G
Sbjct: 175 LIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAG 234
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V +Y + + +EA +++ M+ + T + ++ GLC++ A
Sbjct: 235 VDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAY 294
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGR-------------------LRTARWILKEL 162
+FR + K G VP VTY LI L KAGR L T ++ L
Sbjct: 295 ALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWL 354
Query: 163 GDSGHAP----------------NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
G G N +TYT ++ + ++L M+ K + +
Sbjct: 355 GKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNV 414
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK------------- 253
+ +VI FVK G L +AT+Y M G+ ++V+Y TLI+ + K
Sbjct: 415 VTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHD 474
Query: 254 ----------------------EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
GK+E A L + G D +T LIDGL KAG+
Sbjct: 475 MLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGD 534
Query: 292 IKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 346
+ A + E M++ + YN ++ L GK A ++ M D TY+
Sbjct: 535 MPTAFKFGQELMDR-NMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYN 593
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
+M+ + C+ A KLL S ++ +V GL +G +AK + +++ A
Sbjct: 594 TMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSA 653
Query: 407 KIS 409
S
Sbjct: 654 GFS 656
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 159/384 (41%), Gaps = 36/384 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ F Y + M + G P+ VTY +LI + L LL EM+ G
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D+ +Y +LM L + GK DE + + +L+ T+ ++++ LCK D A
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAE 399
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ +++ P +VT++ +I G K G L A + + + G PN +TY T++
Sbjct: 400 QVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGF 459
Query: 182 FRNRKYKLGLEILSAM-----------------------------------KRKGYTFDG 206
F+ + LE+ M G + D
Sbjct: 460 FKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDH 519
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T+I K G + A + ++++ + D V YN IN C GK + A +L E
Sbjct: 520 VNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTE 579
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M G + D+ T+ +I C+ G A L M NL YN +V L G
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGA 639
Query: 327 IDHAINVFESMEVKDSFTYSSMVH 350
++ A + M V F+ SS+ H
Sbjct: 640 VEKAKYLLNEM-VSAGFSPSSLTH 662
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 157/372 (42%), Gaps = 35/372 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ I+ C F +IL MR G+ PD TYN++I R + +L LL EM
Sbjct: 559 VFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMS 618
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P++ +YN+L+ LF G ++A + +M+ +P + T +L ++R D
Sbjct: 619 SIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVI 678
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + G ++ YN L++ LC G R A +L+E+ SG AP+ IT+ ++
Sbjct: 679 LDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILG 738
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ + M + + + + T++ +GR+ EA + +M G++ +
Sbjct: 739 HCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPN 798
Query: 241 -----------------------------------IVSYNTLINLYCKEGKLEAAYLLLD 265
+ +YN LI+ + K G + A L
Sbjct: 799 NLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFK 858
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+M+K+G T+ IL+ G + N + L+ M + GF + + I K G
Sbjct: 859 DMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPG 918
Query: 326 KIDHAINVFESM 337
A + +++
Sbjct: 919 MTWQAQRLLKNL 930
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 80/210 (38%), Gaps = 38/210 (18%)
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL-------------------- 263
A + +M GV D V+ NTL+ C+ G+++AA L
Sbjct: 118 HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIA 177
Query: 264 --------------LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
D M QG D + L+ G C+AG + AR L+ M + G D
Sbjct: 178 GYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDP 237
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 365
N+ Y + + ++ A +++E M + D T S++V LC+ R A L
Sbjct: 238 NVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALF 297
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
K G ++D L +G +E
Sbjct: 298 REMDKVGAVPNHVTYCTLIDSLAKAGRGKE 327
>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 193/403 (47%), Gaps = 4/403 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ G+++L M + G+ P V+T +LI G ++ ++ L D M +M
Sbjct: 117 IVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKM 176
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P DV++Y L++ L + G A + M + P ++ +++GLCK+ A
Sbjct: 177 WYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEA 236
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + G P LVTY LI+GLC GR + A +L E+ G P+ ++
Sbjct: 237 LNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDA 296
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K ++ M G D F Y ++I + ++ EA MV+ G D
Sbjct: 297 FCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPD 356
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV + +LI+ +CK+ + A LL+EM K GF D T T LI G C+AG A+
Sbjct: 357 IVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFL 416
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M+K G NL+ I+D L K+ + A+++ ++ME + YS ++ +C A
Sbjct: 417 NMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAG 476
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+L +A +L S G++I ++ GL G +A+ +
Sbjct: 477 KLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDL 519
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 148/323 (45%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C F + ++L+ M + G+ PD+ N L+ + + + ++ M+ G
Sbjct: 258 LIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTG 317
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV++YNSL+H K +EA RVF M+ P F +++G CK++ + A+
Sbjct: 318 EGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAM 377
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K GFVP++ T+ LI G C+AGR A+ + + G PN T I+
Sbjct: 378 HLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGL 437
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + AM++ + Y ++ G+L A + + G+Q+++
Sbjct: 438 CKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINV 497
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
Y +I CK+G L+ A LL ME+ G + T+ + + GL I + +L
Sbjct: 498 YIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTI 557
Query: 302 MNKIGFDSNLEAYNCIVDRLGKD 324
M GF + I++ L +
Sbjct: 558 MRDKGFSVDAATTEFIINYLSTN 580
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 178/391 (45%), Gaps = 4/391 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ A L +M E P+VV Y++++ G ++ L+S +L+L EM
Sbjct: 187 VLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGK 246
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P++ +Y L+ L G+ EA + +M+ + P NI+++ CK A
Sbjct: 247 GVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQA 306
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P++ TYN LI C ++ A + + G P+ + +T+++
Sbjct: 307 KSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHG 366
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+++ + +L M + G+ D + T+I F + GR A + M G +
Sbjct: 367 WCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPN 426
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ + +++ CKE L A L MEK + + ++IL+DG+C AG + A
Sbjct: 427 LQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFS 486
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ G N+ Y ++ L K G +D A ++ +ME + ++ TY+ V L K
Sbjct: 487 SLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKK 546
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ + K L G + + + +++ L
Sbjct: 547 EIARSIKYLTIMRDKGFSVDAATTEFIINYL 577
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 169/391 (43%), Gaps = 5/391 (1%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE-MGIPPDVWSY 69
+ D + M P V + L+ R + ++ L+ M +GI D +
Sbjct: 56 NIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADTITL 115
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N +++CL +L V M L P T ++NGLC A+ + ++K
Sbjct: 116 NIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEK 175
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
+ ++ TY +LI GLCK G A L+++ + PN + Y+TIM ++
Sbjct: 176 MWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSE 235
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
L + S M KG + Y +I GR KEA +++M+ G++ D+ N L++
Sbjct: 236 ALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVD 295
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
+CKEGK+ A ++ M G D +T+ LI C + A M G
Sbjct: 296 AFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLP 355
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
++ + ++ KD I+ A+++ E M V D T+++++ C+A R +A +L
Sbjct: 356 DIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELF 415
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
L+ K G ++DGL EA
Sbjct: 416 LNMHKYGQVPNLQTCAVILDGLCKENLLSEA 446
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 193/418 (46%), Gaps = 20/418 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ D + +RM +AG+ P+VVTY +LI G + L C+ LL M G
Sbjct: 253 LISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSG 312
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ W+ + L+ L + + EA + +I + + +++GLCK A
Sbjct: 313 LVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAAD 372
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + L GFVP+ TY+ LI GLC+ L A +L ++ + G P+ +TYT I+
Sbjct: 373 RLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDEL 432
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R +IL M G D F Y + ++ GR+++A M MV GV ++
Sbjct: 433 VREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNL 492
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK---AGNIKGAR-- 296
V+YN LI Y G A+ M G + ++ ++T+L+ L K + NI
Sbjct: 493 VTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVS 552
Query: 297 ---------LH--LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKD 341
LH LE M K+ S ++ YNC + L + ++D A + M+
Sbjct: 553 IWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPS 612
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
Y+S++ C+ K L A + S +KSG + + ++ L G + AK++
Sbjct: 613 EDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQV 670
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 174/380 (45%), Gaps = 4/380 (1%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
TY +LI L S L +L G PD +Y S + + G A R+F M
Sbjct: 74 TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLM 133
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
T+ +L+GLC A+ +F G+Q G P+ Y ++ GLC AGR
Sbjct: 134 PLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRT 193
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
R A +L + G PN + Y ++ +L +++ M G + + Y +
Sbjct: 194 REAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTEL 253
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I+ F K +L A +MV G+ ++V+Y LI C +G+L+ AY LL ME G
Sbjct: 254 ISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGL 313
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
+++T ++LID LCK + A+L L + + G N Y ++D L K G+ A
Sbjct: 314 VPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADR 373
Query: 333 VFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
+ +++ V D+ TYSS++ LC+ K L A +L ++ GV+ ++D L
Sbjct: 374 LMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELV 433
Query: 389 HSGCRREAKKIQSKIRMAKI 408
+KKI K+ A I
Sbjct: 434 REVGADGSKKILDKMIAAGI 453
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 171/377 (45%), Gaps = 4/377 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+AYC A L+ + AG +PD Y S + G R LL+ + L M G
Sbjct: 78 LINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRG 137
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
++Y +L+H L G EA VF M P + M++GLC T A
Sbjct: 138 CVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAE 197
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ GF P +V YN LI G C G L A + + + +G +PN TYT ++
Sbjct: 198 TLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGF 257
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++RK + + S M G + Y +I G+L A ++ M G+ +
Sbjct: 258 CKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNE 317
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ + LI+ CK ++ A LLL + ++G + ++ +T LIDGLCKAG A ++
Sbjct: 318 WTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQT 377
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
+ GF + Y+ ++D L + ++ A+ V + M K TY+ ++ L +
Sbjct: 378 LVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVG 437
Query: 358 LPSASKLLLSCLKSGVR 374
+ K+L + +G++
Sbjct: 438 ADGSKKILDKMIAAGIK 454
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 150/321 (46%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
T+L+ G P+VV YN+LI G L ++D+ + M G P+V +Y L+
Sbjct: 198 TLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGF 257
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ K D A +F M+ L P T+ ++ G C + D A R+ + ++ G VP
Sbjct: 258 CKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNE 317
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
T ++LI LCK R+ A+ +L L G N I YT+++ + ++ ++
Sbjct: 318 WTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQT 377
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
+ +G+ D Y ++I + L EA ++ M+ GVQ V+Y +I+ +E
Sbjct: 378 LVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVG 437
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+ + +LD+M G + D +T+TI + C G ++ A + +M G NL YN
Sbjct: 438 ADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNA 497
Query: 317 IVDRLGKDGKIDHAINVFESM 337
++ G A + F+ M
Sbjct: 498 LICGYANLGLTSQAFSTFKHM 518
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 158/362 (43%), Gaps = 26/362 (7%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDA C+ +L + + GI + + Y SLI G + + + L+ ++
Sbjct: 322 VLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQ 381
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD +Y+SL+ L + + EA V DM+ + P T+ I+++ L + D +
Sbjct: 382 GFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGS 441
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G P++ TY I ++ C GR+ A ++ + D G PN +TY ++ C
Sbjct: 442 KKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALI-C 500
Query: 181 CFRNRKYKLGL-----EILSAMKRKGYTFDGFGYCTVIAAFV----------------KI 219
+ N LGL M G + Y ++ + KI
Sbjct: 501 GYAN----LGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKI 556
Query: 220 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
+K +E+MV + +I YN + C+ +L+ A +LL EM+ + +
Sbjct: 557 AEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVY 616
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
T +I C+ + A ++ M K G+ LE+Y I+ L ++G I A VF M
Sbjct: 617 TSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLS 676
Query: 340 KD 341
K+
Sbjct: 677 KE 678
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 130/295 (44%), Gaps = 39/295 (13%)
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI------------------ 177
L TY LI C AG L ++ L L +G AP++ YT+
Sbjct: 72 LRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFV 131
Query: 178 ---MKCCFRNR--------------KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
++ C R + + + + M+ G D Y T++ G
Sbjct: 132 LMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAG 191
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
R +EA + + +G + ++V YN LI+ YC G LE A + + M+ G + T+T
Sbjct: 192 RTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYT 251
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 338
LI G CK+ + A + M G N+ Y ++ DG++D A + +SME
Sbjct: 252 ELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENS 311
Query: 339 --VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
V + +T S ++ LCK +R+ A LL S ++ G+++ + +++DGL +G
Sbjct: 312 GLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAG 366
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 137/309 (44%), Gaps = 16/309 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID + V D IL++M AGI PDV TY + + + ++ M++
Sbjct: 427 IIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDH 486
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P++ +YN+L+ LG +A F+ M+ P ++ ++L L K ++N
Sbjct: 487 GVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNI 546
Query: 121 LRMFRGLQK-------HGFVPELV---------TYNILIKGLCKAGRLRTARWILKELGD 164
+ K HG + E+V YN + LC+ RL A+ +L E+
Sbjct: 547 PANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQS 606
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
+ P+ YT+I+ CC R + L + +M + GY Y +I++ + G ++
Sbjct: 607 ANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQT 666
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A M++ + +++ LI+ ++G + LL ME++ + + L
Sbjct: 667 AKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYARLTG 726
Query: 285 GLCKAGNIK 293
+ A +I+
Sbjct: 727 KITDANDIQ 735
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 4/162 (2%)
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
ME + ++ +Y TLIN YC G L A+ L + + GF D + +T + G C+
Sbjct: 60 MESFASRMPARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCR 119
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 344
AG + A M G Y ++ L G + A++VF M+ D
Sbjct: 120 AGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHV 179
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
Y++MVH LC A R A LL + G A++DG
Sbjct: 180 YATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDG 221
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 149/285 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV+YN+L+ G R L L ML
Sbjct: 147 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 206
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D AN +F +M+ L P TF +++G CKN D A
Sbjct: 207 GVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 266
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + +P+L+TYN LI GLCK G L+ A ++ E+ G P+ TYTT++
Sbjct: 267 MEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDG 326
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + E M ++ D Y +I+ + GR +A + +M++ G++ D
Sbjct: 327 CCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 386
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y +IN +CK+G + LL EM + G T+ +L++G
Sbjct: 387 TGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPSVVTYNVLMNG 431
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 161/309 (52%), Gaps = 2/309 (0%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ ++ + + + D + + G+ P V SYN+
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 182
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M+ + P T+++++NGLCK D A +F + G
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKG 242
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP VT+ LI G CK GR+ A I K++ P+ ITY T++ + K
Sbjct: 243 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAH 302
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+++ M KG D F Y T+I K G L A ++ ++M+ + ++LD V+Y LI+
Sbjct: 303 DLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGL 362
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 310
C+EG+ A +L EM G + D T+T++I+ CK G++ KG++L L+ M++ G +
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKL-LKEMHRDGHAPS 421
Query: 311 LEAYNCIVD 319
+ YN +++
Sbjct: 422 VVTYNVLMN 430
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 143/298 (47%), Gaps = 1/298 (0%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E+LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ + G P++ TY++LI GLCK ++ A + E+ G PN +T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTF 250
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + D Y T+I K G LK+A D +++M
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 310
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D +Y TLI+ CKEG L+ A+ M ++ D +T LI GLC+ G
Sbjct: 311 KGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 370
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
A L M +G + Y I++ K G + + + M +D S + +N+
Sbjct: 371 AEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMH-RDGHAPSVVTYNV 427
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 129/272 (47%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y + + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 172
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ ++Y T+M R G + SAM G D + Y +I K ++ A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGAN 232
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ + V++ TLI+ +CK G+++ A + +M Q D T+ LI GL
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K A ++ M+ G + Y ++D K+G +D A + M + D
Sbjct: 293 CKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 352
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 156/317 (49%)
Query: 23 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 82
+E G+ P + +YN LI G + +L EM G PDV++YN L+ + GK
Sbjct: 782 KELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKI 841
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
+E +++ MIC P T T NI++ L K+ D AL +F L F P TY L
Sbjct: 842 NELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPL 901
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
+ GL K+GRL A+ + +E+ D G PN Y ++ + E+ M R+G
Sbjct: 902 LDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGI 961
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
D Y +++ + GR+ +A Y E++ G+ LD ++YN +I+ + ++E A
Sbjct: 962 RPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALT 1021
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
L DEM+ +G D +T+ LI L AG ++ A E + IG + N+ YN ++
Sbjct: 1022 LYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYS 1081
Query: 323 KDGKIDHAINVFESMEV 339
G D A V++ M V
Sbjct: 1082 MSGNSDSAYAVYKRMMV 1098
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 169/359 (47%), Gaps = 5/359 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
+ N M+ I D+ TY + G L + +M E G + +SYN L+H L
Sbjct: 145 VVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLL 204
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
Q G EA +++ M+ L P TF+ ++ K R T+ + ++ G P +
Sbjct: 205 LQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNI 264
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
TY I I+ L +AGR+ A I+K + D G P+ +TYT ++ K +E+
Sbjct: 265 YTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVK 324
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
MK + D Y T++ F G L ++ +M DG D++++ L+N CK G
Sbjct: 325 MKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGN 384
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
++ A+ LLD M KQG + +T+ LI GL + + A M +G Y
Sbjct: 385 IDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYIL 444
Query: 317 IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
+D GK G+ D A+ FE M+++ + ++ +++L + RL A K++ + LKS
Sbjct: 445 FIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREA-KVIFNRLKS 502
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 164/357 (45%), Gaps = 4/357 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D I+ RM + G PDVVTY LI L +++L +M PD +Y ++
Sbjct: 281 DEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITM 340
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ G + +M P TF I++N LCK D A + ++K G
Sbjct: 341 LDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGV 400
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+P L TYN LI GL + RL A + + G P A TY + ++ + LE
Sbjct: 401 LPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALE 460
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
MK +G + + + ++GRL+EA ++ ++G+ D V+YN ++ Y
Sbjct: 461 TFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYS 520
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K G+++ A LL +M + E D LI+ L KAG + A + + +
Sbjct: 521 KAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVV 580
Query: 313 AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
YN ++ LGK+G++ A+ +F SM ++ T+++++ LCK + A K+L
Sbjct: 581 TYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKML 637
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 166/348 (47%), Gaps = 3/348 (0%)
Query: 20 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 79
+ M G +PDV+T+ L+ + + + LLD M + G+ P++ +YN+L+ L ++
Sbjct: 358 SEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRV 417
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
+ D+A +F +M + P T+ + ++ K+ +D AL F ++ G P +V
Sbjct: 418 NRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVAC 477
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
N + L + GRLR A+ I L +G AP+++TY +MKC + + +E+LS M
Sbjct: 478 NASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSE 537
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
D ++I K GR+ EA ++ + +V+YNTLI KEG+++
Sbjct: 538 NQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQR 597
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A L M G + T ++D LCK + A L M + ++ +N I+
Sbjct: 598 AMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIH 657
Query: 320 RLGKDGKIDHAINVFESME---VKDSFTYSSMVHNLCKAKRLPSASKL 364
L + ++ AI +F M+ D T +++ + K + A K+
Sbjct: 658 GLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAFKI 705
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 166/365 (45%), Gaps = 4/365 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDA C D + +M+ + PD VTY +++ + L + EM
Sbjct: 304 VLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEAD 363
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV ++ L++ L + G DEA + M + P T+N +++GL + D+A
Sbjct: 364 GYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDA 423
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F ++ G VP TY + I K+GR A +++ G APN + +
Sbjct: 424 LDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYS 483
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + I + +K G D Y ++ + K G++ EA + + M + + D
Sbjct: 484 LAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPD 543
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I+ N+LIN K G+++ A+ + ++ T+ LI GL K G ++ A
Sbjct: 544 IIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFA 603
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M G N +N I+D L K+ ++D A+ + M + D T+++++H L K
Sbjct: 604 SMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEK 663
Query: 357 RLPSA 361
R+ A
Sbjct: 664 RVSDA 668
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 161/349 (46%), Gaps = 4/349 (1%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
RM G+ P + T+++L+ + LL+EM +G+ P++++Y + L + G
Sbjct: 219 RMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAG 278
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
+ DEA R+ + M P T+ ++++ LC D+A+ +F ++ P+ VTY
Sbjct: 279 RIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYI 338
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
++ G L + E+ G+AP+ IT+T ++ + +L M+++
Sbjct: 339 TMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQ 398
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G + Y T+I+ +++ RL +A D M T GV +Y I+ Y K G+ + A
Sbjct: 399 GVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKA 458
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
++M+ +G + + L + G ++ A++ + G + YN ++
Sbjct: 459 LETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKC 518
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
K G++D AI + M D +S+++ L KA R+ A K+
Sbjct: 519 YSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMF 567
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/475 (23%), Positives = 188/475 (39%), Gaps = 77/475 (16%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ ID Y + D +M+ GI+P++V N+ + L + + + +
Sbjct: 444 LFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSN 503
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD +YN +M C + G+ DEA + DM P N ++N L K D A
Sbjct: 504 GLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEA 563
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+MF L+ P +VTYN LI GL K G+++ A + + +G PN IT+ TI+ C
Sbjct: 564 WKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDC 623
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+N + L L++L M D + T+I V R+ +A QM + D
Sbjct: 624 LCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM-KKMLTPD 682
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDE-MEKQGFECDKYTHTILIDGL------------- 286
V+ TL+ K G +E A+ + ++ + + G D+ L+ G+
Sbjct: 683 CVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFG 742
Query: 287 --------CKAGNI---------------KGARLHLEYMNKIGFDSNLEAYNCIV----- 318
CK G++ + + + ++G LE+YN ++
Sbjct: 743 DRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLG 802
Query: 319 ------------------------------DRLGKDGKIDHAINVFESMEVK----DSFT 344
D GK GKI+ ++E M ++ T
Sbjct: 803 VHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTIT 862
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
++ ++ NL K+ L A L + ++DGL SG EAK++
Sbjct: 863 HNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKEL 917
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 148/305 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++A C+ + D + +L+ MR+ G+ P++ TYN+LI+G R + L +LDL + M +
Sbjct: 374 ILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETL 433
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P ++Y + + G+ D+A F+ M + P N L L + A
Sbjct: 434 GVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREA 493
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F L+ +G P+ VTYN+++K KAG++ A +L ++ ++ P+ I +++
Sbjct: 494 KVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINT 553
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ + ++ +K Y T+IA K G+++ A + M +G +
Sbjct: 554 LYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPN 613
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++NT+++ CK +++ A +L +M D T +I GL + A
Sbjct: 614 TITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFH 673
Query: 301 YMNKI 305
M K+
Sbjct: 674 QMKKM 678
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 141/281 (50%), Gaps = 2/281 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+DA+ + + + + +M + P+ +T+N +IA +++ L +LDL +++
Sbjct: 830 LLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSG 889
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P +Y L+ L + G+ +EA +F++M+ P A +NI++NG K + A
Sbjct: 890 DFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTA 949
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ + + G P+L +Y L+ LC+AGR+ A ++L +G ++I Y ++
Sbjct: 950 CELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDG 1009
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R+ + + L + M+ +G D F Y ++I G +++A E++ G++ +
Sbjct: 1010 LGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPN 1069
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
+ +YN LI Y G ++AY + M G C T T
Sbjct: 1070 VFTYNALIRGYSMSGNSDSAYAVYKRMMVGG--CSPNTGTF 1108
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 115/487 (23%), Positives = 203/487 (41%), Gaps = 83/487 (17%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG--------------------- 40
LI+ + D + + R+++ ++P VVTYN+LIAG
Sbjct: 550 LINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNG 609
Query: 41 -----ATRNSLLSC---------SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
T N++L C +L +L +M M PDV ++N+++H L + +A
Sbjct: 610 CPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAI 669
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG-------------------- 126
+F M LTP T +L G+ KN ++A ++
Sbjct: 670 WLFHQMK-KMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGG 728
Query: 127 -LQKHG------FVPELVTYNI---------LIKGLCKAGRLRTARWIL----KELGDSG 166
L + G F LV + +IK LCK + A+ + KELG
Sbjct: 729 ILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVK- 787
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P +Y +++ ++ + + MK G D F Y ++ A K G++ E
Sbjct: 788 --PTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELF 845
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ EQM+ + + +++N +I K L+ A L ++ F T+ L+DGL
Sbjct: 846 ELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGL 905
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
K+G ++ A+ E M G N YN +++ GK G ++ A +F+ M + D
Sbjct: 906 LKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDL 965
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 402
+Y+S+V LC+A R+ A ++G+ + A ++DGL S EA + +
Sbjct: 966 KSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDE 1025
Query: 403 IRMAKIS 409
++ I+
Sbjct: 1026 MQSRGIN 1032
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 139/330 (42%), Gaps = 5/330 (1%)
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + S +M L + P +A F + + T T N ML L +R + +
Sbjct: 85 PKNALSSKEVMAVLNSILDPTDAFSYFNSVAEMPFVVHTTETCNHMLEILRIHRRVGDMV 144
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +Q +L TY I+ KGL G LR + ++ ++G NA +Y ++
Sbjct: 145 VVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLL 204
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + LE+ M +G + ++ A K + +E+M + G++ +I
Sbjct: 205 LQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNI 264
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y I + + G+++ A ++ ME G D T+T+LID LC AG + A
Sbjct: 265 YTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVK 324
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M + Y ++D+ G + + ME D T++ +V+ LCKA
Sbjct: 325 MKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGN 384
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ A LL K GV ++ GL
Sbjct: 385 IDEAFHLLDVMRKQGVLPNLHTYNTLISGL 414
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 35/211 (16%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D + + + M + G P+ YN LI G + ++ + +L M+ G
Sbjct: 901 LLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREG 960
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+ SY SL+ CL + G+ D+A F+ + L + +N+M++GL ++ + AL
Sbjct: 961 IRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEAL 1020
Query: 122 RMFRGLQKHGFVPELVTY-----------------------------------NILIKGL 146
++ +Q G P+L TY N LI+G
Sbjct: 1021 TLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGY 1080
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTI 177
+G +A + K + G +PN T+ +
Sbjct: 1081 SMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 179/354 (50%), Gaps = 4/354 (1%)
Query: 23 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 82
+ I P+ +T+N +I R L+ ++++ E+ PD ++Y++LMH L + +
Sbjct: 162 KSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERI 221
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
DEA + +M P FN++++ LCK A ++ + G VP VTYN L
Sbjct: 222 DEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNAL 281
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
+ GLC G+L A +L ++ + PN +T+ T++ + G +L +++ +G+
Sbjct: 282 VHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGH 341
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
+ + Y ++I+ K G+ +A + ++MV G + + Y+ LI+ C+EGKL+ A
Sbjct: 342 RGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARG 401
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
L EM+ +G+ + +T++ L+ G +AG+ A L + M N Y+ +++ L
Sbjct: 402 FLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLC 461
Query: 323 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
KDGK A+ V++ M + D YSSM+H C A + KL L G
Sbjct: 462 KDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQG 515
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 175/364 (48%), Gaps = 7/364 (1%)
Query: 31 VVTYNSLIAGATRNSLLSCSLDLLDEML---EMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
V ++NS++ + L + +L+ + ++ + I P+ ++N ++ + +LG D+A
Sbjct: 132 VKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIE 191
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
VF+++ + P T++ +++GLCK D A+ + +Q G P LV +N+LI LC
Sbjct: 192 VFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALC 251
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K G L A ++ + G PN +TY ++ K + + +L+ M +
Sbjct: 252 KKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDV 311
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
+ T+I FV GR + T + + G + + Y++LI+ CKEGK A L EM
Sbjct: 312 TFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEM 371
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
+G + ++ LIDGLC+ G + AR L M G+ N Y+ ++ + G
Sbjct: 372 VGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDS 431
Query: 328 DHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
AI V++ M + + YS +++ LCK + A + L G+++ A ++
Sbjct: 432 HKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSM 491
Query: 384 VDGL 387
+ G
Sbjct: 492 IHGF 495
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 135/288 (46%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ D ++L+ M+ G P++V +N LI+ + L + L+D M G
Sbjct: 211 LMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKG 270
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +YN+L+H L GK ++A + M+ P TF ++NG +
Sbjct: 271 CVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGT 330
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ L+ G Y+ LI GLCK G+ A + KE+ G PN I Y+ ++
Sbjct: 331 RVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGL 390
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R K LS MK KGY + F Y +++ + + G +A ++M + +
Sbjct: 391 CREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNE 450
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
V Y+ LIN CK+GK A ++ +M +G + D ++ +I G C A
Sbjct: 451 VCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNA 498
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 110/240 (45%), Gaps = 4/240 (1%)
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
PNA+T+ ++K R +E+ + + D + Y T++ K R+ EA
Sbjct: 168 PNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSL 227
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+++M +G ++V++N LI+ CK+G L A L+D M +G ++ T+ L+ GLC
Sbjct: 228 LDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCL 287
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 344
G ++ A L M N + +++ G+ V S+E + + +
Sbjct: 288 KGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYV 347
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
YSS++ LCK + A +L + G A++DGL G EA+ S+++
Sbjct: 348 YSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMK 407
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 68/156 (43%), Gaps = 16/156 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG--ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
+I +C + G + N+M G + PDV+TYN L+ + ++D+L+ ML+
Sbjct: 491 MIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLD 550
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G PD + + + L + P + R F D + L K + T
Sbjct: 551 QGCDPDFITCDIFLKTLRENMNPPQDGREFLDELVVRLV--------------KRQRTIG 596
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 155
A ++ + +P+ T+ ++++ +CK +R A
Sbjct: 597 ASKIIEVMMHKFLLPKASTWAMVVQQVCKPKNVRKA 632
>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
Length = 348
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 156/295 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ A +L R+ + + V YN++I G ++ ++ + DL EM+ G
Sbjct: 48 LIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKG 107
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V +Y++L+ F +GK +A +F +I ++ P TFNI+++G CK+R
Sbjct: 108 ISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGK 167
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + K G +P++VTYN L+ G + TA+ I + G P+ +Y ++
Sbjct: 168 TVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGF 227
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +K + + + M K + Y ++I K GR+ A ++QM GV +I
Sbjct: 228 CKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNI 287
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
++YN++I+ K +++ A L+ + + QG + YT+TILIDGLCK G +K AR
Sbjct: 288 LTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDAR 342
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 173/345 (50%), Gaps = 6/345 (1%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G P+ +T N+LI G + + D+++ +G D SY +L+H L ++G+ A
Sbjct: 2 GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61
Query: 86 NRVFQDMICGDLTPCTAT-FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
+ Q + G L A +N ++ G+CK+++ ++A ++ + G P +VTY+ LI
Sbjct: 62 LDLLQ-RVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 120
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
G G+L+ A + ++ P+ T+ ++ ++RK K G + + M ++G
Sbjct: 121 GFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIP 180
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D Y +++ + + + A M GV DI SYN LIN +CK K++ A L
Sbjct: 181 DVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLF 240
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+EM + + T+ LIDGL K+G I A ++ M+ G N+ YN I+D L K
Sbjct: 241 NEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKT 300
Query: 325 GKIDHAINV---FESMEVKDS-FTYSSMVHNLCKAKRLPSASKLL 365
++D AI + F+ ++ S +TY+ ++ LCK RL A +
Sbjct: 301 HQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIF 345
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 113/215 (52%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ N++ I PD T+N L+ G ++ + + M++ GI PDV +YNSL+
Sbjct: 134 LFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYR 193
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ + + A +F M G + P ++NI++NG CK + D A+ +F + +P +V
Sbjct: 194 LVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVV 253
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN LI GL K+GR+ A ++ ++ D G PN +TY +I+ F+ + + +++
Sbjct: 254 TYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKF 313
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
K +G + Y +I K GRLK+A + E +
Sbjct: 314 KDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 142/293 (48%), Gaps = 4/293 (1%)
Query: 99 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 158
P T T N ++ GLC A L GF + V+Y LI GLCK G R A +
Sbjct: 5 PNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDL 64
Query: 159 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 218
L+ + NA+ Y T++ +++ ++ S M KG + + Y +I+ F
Sbjct: 65 LQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFV 124
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
+G+LK+A D +++ + ++ D ++N L++ +CK+ K++ + M KQG D T
Sbjct: 125 VGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVT 184
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+ L+DG + A+ M + G + ++ +YN +++ K K+D A+N+F M
Sbjct: 185 YNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMH 244
Query: 339 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ + TY+S++ L K+ R+ A +L+ GV +++D L
Sbjct: 245 CKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDAL 297
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 98/178 (55%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D +C+ G T+ M + GI PDVVTYNSL+ G ++ + + + M +
Sbjct: 152 ILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQG 211
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD+ SYN L++ ++ K D+A +F +M C ++ P T+N +++GL K+ A
Sbjct: 212 GVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYA 271
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
L++ + G P ++TYN +I L K ++ A ++ + D G P+ TYT ++
Sbjct: 272 LQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILI 329
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 73/127 (57%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ D + N M I P+VVTYNSLI G +++ +S +L L+D+M +
Sbjct: 222 ILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDR 281
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+PP++ +YNS++ LF+ + D+A + + P T+ I+++GLCK +A
Sbjct: 282 GVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDA 341
Query: 121 LRMFRGL 127
+F L
Sbjct: 342 RNIFEDL 348
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 166/325 (51%), Gaps = 1/325 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ +L +M + G+ P+++ YN ++ G + L++ + L EM+ G
Sbjct: 167 LINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKG 226
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG-DLTPCTATFNIMLNGLCKNRYTDNA 120
I DV++YNSL+H G+ A R+ +M+ D+ P TFNI+++ LCK A
Sbjct: 227 ICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEA 286
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + K G P++V+ N L+ G C G + A+ + + + G PN I+Y+T++
Sbjct: 287 RNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLING 346
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + L +L+ M ++ D Y ++ K GR+ D +E M G D
Sbjct: 347 YCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPD 406
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++YN L++ Y K L+ A L + G + T+ ILIDGLCK G +K A+ +
Sbjct: 407 LITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQ 466
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDG 325
++ G N+ YN +++ L ++G
Sbjct: 467 LLSVKGCRPNIRTYNIMINGLRREG 491
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 183/376 (48%), Gaps = 5/376 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P +VT + I T + + ++ ++++ G D ++ +LM L G+ EA +
Sbjct: 89 PSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNL 148
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
+ + + + ++NGLCK T +A+ + R ++K G P L+ YN+++ GLCK
Sbjct: 149 YDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCK 208
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM-KRKGYTFDGF 207
G + A + E+ G + TY +++ +++ + +L+ M ++ D +
Sbjct: 209 EGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVY 268
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
+ ++ A K+G + EA + M+ G++ D+VS N L+N +C G + A + D M
Sbjct: 269 TFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRM 328
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
++G + +++ LI+G CK + A L M++ + YNC++D L K G++
Sbjct: 329 VERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRV 388
Query: 328 DHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
+ ++ E+M + D TY+ ++ + K + L A L + +G+ +
Sbjct: 389 LYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNIL 448
Query: 384 VDGLRHSGCRREAKKI 399
+DGL G + AK+I
Sbjct: 449 IDGLCKGGRMKAAKEI 464
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 180/396 (45%), Gaps = 5/396 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ I++ ++++ ++ + G D T +L+ G +L+L D +
Sbjct: 96 IFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSK 155
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D Y +L++ L ++GK +A + + M G + P +N++++GLCK A
Sbjct: 156 GFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEA 215
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL-GDSGHAPNAITYTTIMK 179
+ + G ++ TYN LI G C AG+ + A +L E+ P+ T+ ++
Sbjct: 216 CGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVD 275
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + M ++G D ++ + G + EA + ++MV G
Sbjct: 276 ALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLP 335
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+++SY+TLIN YCK ++ A LL EM ++ D T+ L+DGL K+G + +
Sbjct: 336 NVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLV 395
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
E M G +L YN ++D K +D A+ +F+ + + TY+ ++ LCK
Sbjct: 396 EAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKG 455
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
R+ +A ++ G R +++GLR G
Sbjct: 456 GRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREG 491
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 155/342 (45%), Gaps = 6/342 (1%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGK-PDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
ML + PP + S N L+ + + P + G P T +I +N L
Sbjct: 45 RMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHL 104
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
A + + K GF + T L+KGLC GR A + G + + + Y
Sbjct: 105 GQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCY 164
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
T++ + K + +E+L M++ G + Y V+ K G + EA +MV
Sbjct: 165 GTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVG 224
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDKYTHTILIDGLCKAGNIK 293
G+ +D+ +YN+LI+ +C G+ + A LL+EM K+ D YT IL+D LCK G +
Sbjct: 225 KGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVA 284
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMV 349
AR M K G + ++ + N +++ G + A VF+ M ++ + +YS+++
Sbjct: 285 EARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLI 344
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ CK K + A +LL + + ++DGL SG
Sbjct: 345 NGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSG 386
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ A I + G P++ TYN +I G R LL + LL EM++
Sbjct: 447 ILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDD 506
Query: 61 GIPPDVWSYNSLMHCLFQ 78
G PP+ +++ L+ L +
Sbjct: 507 GFPPNAVTFDPLVRALLE 524
>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
turbinata]
Length = 413
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 152/285 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV+YN+L+ G R L L ML
Sbjct: 129 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAN 188
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN +F +M+ L P TF +++G CKN D A
Sbjct: 189 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLA 248
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + +P+L+TYN LI GLCK G L+ A ++ E+ G P+ TYTT++
Sbjct: 249 MEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDG 308
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + + M ++ D Y +I+ + G+ +A + +M++ G++ D
Sbjct: 309 CCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLSVGLKPD 368
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
I +Y +IN +CK+G + LL EM++ G T+ +L++G
Sbjct: 369 IGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 413
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 160/309 (51%), Gaps = 2/309 (0%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ ++ + + + D + + G+ P V SYN+
Sbjct: 105 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 164
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M+ + P T+++++NGLCK D+A +F + G
Sbjct: 165 LMNGYIRLGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 224
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
+P VT+ LI G CK GR+ A I K + P+ ITY T++ +N K
Sbjct: 225 LIPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAH 284
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+++ M KG D F Y T+I K G L A + ++M+ + ++LD V+Y LI+
Sbjct: 285 DLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGL 344
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 310
C+EG+ A +L EM G + D T+T++I+ CK G++ KG++L L+ M + G +
Sbjct: 345 CQEGQSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKL-LKEMQRNGHAPS 403
Query: 311 LEAYNCIVD 319
+ YN +++
Sbjct: 404 VVTYNVLMN 412
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 139/284 (48%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E+LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 113 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 172
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ + +G P++ TY++LI GLCK ++ A + E+ G PN +T+
Sbjct: 173 GDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 232
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + D Y T+I K G LK+A D +++M
Sbjct: 233 TTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSM 292
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D +Y TLI+ CKEG L+ A+ M ++ D +T LI GLC+ G
Sbjct: 293 KGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVD 352
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G ++ Y I++ K G + + + M+
Sbjct: 353 AEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQ 396
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 129/272 (47%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
ML L K RY + + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 95 MLEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 154
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ ++Y T+M R G + SAM G D + Y +I K ++ +A
Sbjct: 155 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDAN 214
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ + V++ TLI+ +CK G+++ A + M Q D T+ LI GL
Sbjct: 215 ELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGL 274
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K A ++ M+ G + Y ++D K+G +D A + M + D
Sbjct: 275 CKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDD 334
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ + A K+L L G++
Sbjct: 335 VAYTALISGLCQEGQSVDAEKMLREMLSVGLK 366
>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 418
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 142/284 (50%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E LE G P ++ +N LMH + G+ A VF + L P +FN ++NG K
Sbjct: 125 EENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
+ R+ +Q G P++ TY++LI GLCK ++ A + E+ D G PN +T+
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A D +++M+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG LE A+ M K+ D +T LI GLC+ G
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K G + + + M+
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 143/257 (55%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + + + G+ P VV++N+L+ G + L+ L + M G+ PDV++Y+ L++ L
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ K D+AN +F +M+ L P TF +++G CKN D A+ +++ + P+L
Sbjct: 217 CKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+TYN LI GLCK G L+ A+ ++ E+ G P+ ITYTT++ + + E
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKR 336
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M ++ D Y +I+ + GR +A + +M++ G++ +I +Y +IN +CK+G
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396
Query: 257 LEAAYLLLDEMEKQGFE 273
+ LL EM++ G++
Sbjct: 397 VWTGSKLLKEMQRDGYK 413
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 149/288 (51%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ G + + + + D + + G+ P V S+N+LM+ +LG +
Sbjct: 129 ECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M + P T+++++NGLCK D+A +F + G VP VT+ LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I K++ +P+ ITY T++ + K +++ M KG
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A +Y ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
L EM G + + T+T++I+ CK G++ L+ M + G+ ++
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSV 416
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 139/300 (46%), Gaps = 4/300 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F+ ++ ++ + +A+ +R ++H F T +++ L K + +E
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENL 128
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+ G+ + + +M + + +L + A+ + G + T++ ++K+G L
Sbjct: 129 ECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN 188
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
E M GVQ D+ +Y+ LIN CKE K++ A +L DEM +G + T T LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLI 248
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
DG CK G + A + M +L YN ++ L K G + A ++ + M +K
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLK 308
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D TY++++ CK L +A + +K +R+ A A++ GL G +A+K+
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 101/202 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ D + + M + G+ P+ VT+ +LI G +N + ++++ +ML
Sbjct: 211 VLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+ +YN+L++ L + G +A + +MI L P T+ +++G CK + A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETA 330
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K + V Y LI GLC+ GR A +L+E+ G P TYT I+
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 181 CFRNRKYKLGLEILSAMKRKGY 202
+ G ++L M+R GY
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGY 412
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ D I +M +SPD++TYN+LI G + L + DL+DEM+ G
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y +L+ + G + A + MI ++ + +++GLC+ + +A
Sbjct: 307 LKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+M R + G PE+ TY ++I CK G + T +LKE+ G+ P+ +T
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 161/331 (48%), Gaps = 5/331 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID +C F + +L M E I+PDV+T+N+LI+ + + L + L DEML
Sbjct: 337 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 396
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD +YNS+++ + + D+A +F M +P TFN +++ C+ + D +
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGM 452
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ R + + G V TYN LI G C+ L A+ + +E+ G P+ IT ++
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N K + LE+ ++ D Y +I K ++ EA D + GV+ D+
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN +I+ +C + + A +L +M+ G E D T+ LI G KAG I + +
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
M GF + + D L DG++D + +
Sbjct: 633 MRSNGFSGDAFTIKMVAD-LITDGRLDKSFS 662
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 181/368 (49%), Gaps = 8/368 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ + +L++M E I PDVV Y+++I ++ S + L EMLE G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V++YN ++ G+ +A R+ +DMI ++ P TFN +++ K A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + P+ VTYN +I G CK R A K + D +P+ +T+ TI+
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVY 442
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R ++ G+++L + R+G + Y T+I F ++ L A D ++M++ GV D
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++ N L+ +C+ KLE A L + ++ + D + I+I G+CK + A
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 562
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G + +++ YN ++ I A +F M+ D+ TY++++ KA
Sbjct: 563 LPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGE 622
Query: 358 LPSASKLL 365
+ + +L+
Sbjct: 623 IDKSIELI 630
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 199/439 (45%), Gaps = 54/439 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL--------- 51
+LI +C + ++ + G PDVVT+N+L+ G +S +L
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 52 ------DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 105
L D+M+E+G+ P V ++N+L++ L G+ EA + M+ L T+
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 106 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
++NG+CK T +AL + +++ P++V Y+ +I LCK G A+++ E+ +
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 166 GHAPNAITYTTIMK--CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
G APN TY ++ C F ++ +L M + D + +I+A VK G+L
Sbjct: 326 GIAPNVFTYNCMIDGFCSF--GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 224 EATDYMEQMV-----TDGVQL--------------------------DIVSYNTLINLYC 252
EA ++M+ D V D+V++NT+I++YC
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYC 443
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
+ +++ LL E+ ++G + T+ LI G C+ N+ A+ + M G +
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 368
N ++ ++ K++ A+ +FE +++ D+ Y+ ++H +CK ++ A L S
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563
Query: 369 LKSGVRILKSAQKAVVDGL 387
GV ++ G
Sbjct: 564 PIHGVEPDVQTYNVMISGF 582
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 176/418 (42%), Gaps = 21/418 (5%)
Query: 9 FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 68
F S D + M + V N +I R + ++ L +M IP +++S
Sbjct: 84 FKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS 143
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
+N L+ C K + F + P TFN +L+GLC AL +F +
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 129 KHGFV---------------PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+ GF+ P ++T+N LI GLC GR+ A ++ ++ G + +T
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
Y TI+ + K L +LS M+ D Y +I K G +A +M+
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI- 292
G+ ++ +YN +I+ +C G+ A LL +M ++ D T LI K G +
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
+ +L E +++ F + YN ++ K + D A ++F+ M D T+++++
Sbjct: 384 EAEKLCDEMLHRCIFPDTV-TYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVY 442
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
C+AKR+ +LL + G+ A + L H C + + ISH
Sbjct: 443 CRAKRVDEGMQLLREISRRGL----VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496
>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
urticoides]
Length = 412
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 150/285 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV+YN+L+ G R L L ML
Sbjct: 128 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 187
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D AN +F +M+ L P TF +++G CKN D A
Sbjct: 188 GVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 247
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + +P+L+TYN LI GLCK G L+ A ++ E+ G P+ TYTT++
Sbjct: 248 MEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDG 307
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + E M ++ D Y +I+ + GR +A + +M++ G++ D
Sbjct: 308 CCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 367
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y ++N +CK+G + LL EM++ G T+ +L++G
Sbjct: 368 TGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 412
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 160/309 (51%), Gaps = 2/309 (0%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ ++ + + + D + + G+ P V SYN+
Sbjct: 104 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 163
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M+ + P T+++++NGLCK D A +F + G
Sbjct: 164 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKG 223
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP VT+ LI G CK GR+ A I K++ P+ ITY T++ + K
Sbjct: 224 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAH 283
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+++ M KG D F Y T+I K G L A ++ ++M+ + ++LD V+Y LI+
Sbjct: 284 DLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGL 343
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 310
C+EG+ A +L EM G + D T+T++++ CK G++ KG++L L+ M + G +
Sbjct: 344 CQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKL-LKEMQRDGHAPS 402
Query: 311 LEAYNCIVD 319
+ YN +++
Sbjct: 403 VVTYNVLMN 411
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 144/298 (48%), Gaps = 1/298 (0%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E+LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 112 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 171
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ + G P++ TY++LI GLCK ++ A + E+ G PN +T+
Sbjct: 172 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTF 231
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + D Y T+I K G LK+A D +++M
Sbjct: 232 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 291
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D +Y TLI+ CKEG L+ A+ M ++ D +T LI GLC+ G
Sbjct: 292 KGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 351
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
A L M +G + Y IV+ K G + + + M+ +D S + +N+
Sbjct: 352 AEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQ-RDGHAPSVVTYNV 408
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 128/272 (47%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y + + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 94 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 153
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ ++Y T+M R G + SAM G D + Y +I K ++ A
Sbjct: 154 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGAN 213
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
++M+ G+ + V++ TLI+ +CK G+++ A + +M Q D T+ LI GL
Sbjct: 214 GLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 273
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K A ++ M+ G + Y ++D K+G +D A + M + D
Sbjct: 274 CKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 333
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 334 VAYTALISGLCQEGRSVDAEKMLREMLSVGLK 365
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 166/317 (52%), Gaps = 4/317 (1%)
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+A ++ +M P T+N+++NG+CK D A++ + +G P ++T+NI++
Sbjct: 100 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIIL 159
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
+ +C GR A +L ++ G +P+ +T+ ++ R ++IL M G T
Sbjct: 160 RSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCT 219
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
+ Y ++ F K ++ A +Y++ MV+ G DIV+YNTL+ CK+GK++ A +
Sbjct: 220 PNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI 279
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
L+++ +G T+ +IDGL K G + A L+ M + G ++ Y+ +V L +
Sbjct: 280 LNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSR 339
Query: 324 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
+GK+D AI F +E ++ TY+S++ LCK+++ A L + + ++
Sbjct: 340 EGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEAT 399
Query: 380 QKAVVDGLRHSGCRREA 396
+++G+ + G +EA
Sbjct: 400 YTILIEGIAYEGLAKEA 416
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 164/335 (48%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
+ C+ +L+ MR G PDVVTYN LI G + L ++ L+ M G
Sbjct: 89 VQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGC 148
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P+V ++N ++ + G+ +A ++ DM+ +P TFNI++N LC+ A+
Sbjct: 149 QPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAID 208
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ + HG P ++YN L+ G CK ++ A L + G P+ +TY T++
Sbjct: 209 ILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALC 268
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
++ K + +EIL+ + KG + Y TVI K+G+ + A +++M G++ DI+
Sbjct: 269 KDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDII 328
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
+Y++L++ +EGK++ A ++E G + T+ ++ GLCK+ A L YM
Sbjct: 329 TYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYM 388
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
Y +++ + +G A+++ +
Sbjct: 389 ISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 423
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 154/305 (50%), Gaps = 3/305 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ D LN M G P+V+T+N ++ + LL +ML
Sbjct: 122 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRK 181
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P V ++N L++ L + G A + + M TP + ++N +L+G CK + D A
Sbjct: 182 GCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRA 241
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P++VTYN L+ LCK G++ A IL +L G +P ITY T++
Sbjct: 242 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDG 301
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + +++L M+RKG D Y ++++ + G++ EA + + G++ +
Sbjct: 302 LSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPN 361
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++YN+++ CK + + A L M + + + T+TILI+G+ G K A L+
Sbjct: 362 AITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEA---LD 418
Query: 301 YMNKI 305
+N++
Sbjct: 419 LLNEL 423
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 121/255 (47%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L+ M G SP VVT+N LI R LL ++D+L++M G P+ SYN L+H
Sbjct: 174 LLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFC 233
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ K D A M+ P T+N +L LCK+ D A+ + L G P L+
Sbjct: 234 KEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLI 293
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN +I GL K G+ A +L E+ G P+ ITY++++ R K ++ +
Sbjct: 294 TYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 353
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ G + Y +++ K + A D++ M++ + +Y LI EG
Sbjct: 354 EGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLA 413
Query: 258 EAAYLLLDEMEKQGF 272
+ A LL+E+ +G
Sbjct: 414 KEALDLLNELCSRGL 428
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 121/237 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ IL +M G +P+ ++YN L+ G + + +++ LD M+
Sbjct: 192 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 251
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN+L+ L + GK D A + + +P T+N +++GL K T+ A
Sbjct: 252 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 311
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ +++ G P+++TY+ L+ GL + G++ A +L G PNAITY +IM
Sbjct: 312 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 371
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
++R+ ++ L+ M K Y +I G KEA D + ++ + G+
Sbjct: 372 LCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 428
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 4/219 (1%)
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+++L M+ KG D Y +I K GRL EA ++ M + G Q +++++N ++
Sbjct: 101 AMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILR 160
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
C G+ A LL +M ++G T ILI+ LC+ G + A LE M G
Sbjct: 161 SMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTP 220
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
N +YN ++ K+ K+D AI + M + D TY++++ LCK ++ A ++L
Sbjct: 221 NSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 280
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
G + V+DGL G A K+ ++R
Sbjct: 281 NQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 319
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 64/132 (48%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID + + +L+ MR G+ PD++TY+SL++G +R + ++ ++ +G
Sbjct: 298 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 357
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+ +YNS+M L + + D A MI P AT+ I++ G+ AL
Sbjct: 358 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 417
Query: 122 RMFRGLQKHGFV 133
+ L G V
Sbjct: 418 DLLNELCSRGLV 429
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 176/401 (43%), Gaps = 39/401 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID YC+ G +L M G+ P VVTY +L++ R L LL EM E
Sbjct: 299 VLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRER 358
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+PP+V YNS++ L + +A V + M G P TF+ +++GLC+ A
Sbjct: 359 RLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEA 418
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT------- 173
R+ R + P L +Y LI G C G + A +L E+ + GH P+ +T
Sbjct: 419 ERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHG 478
Query: 174 ----------------------------YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
Y ++ + + ++ M + D
Sbjct: 479 LVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPD 538
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ Y T+I F++ L EA E M G+ D+V YN +I YC+ G + A +
Sbjct: 539 KYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMS 598
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M K G D++T+T LI G K GNI GA L M K N+ AY+ +++ K G
Sbjct: 599 TMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLG 658
Query: 326 KIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSAS 362
D A +F SME + F TY+ ++ +L K ++ A+
Sbjct: 659 DTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAA 699
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 184/379 (48%), Gaps = 6/379 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
+ G ++ AG P+ V YN LI G R + + LL EM G+ P V +Y +L
Sbjct: 276 EKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTL 335
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
M L + G ++ + +M L P +N +++ LCK R AL + + + G
Sbjct: 336 MSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGC 395
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGL 191
P+ +T++ LI GLC+ GR++ A +L+E PN +YT+++ C R + +
Sbjct: 396 DPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRG-EVIVAS 454
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+L M +G+T D + +I V G++ EA E+M + D YN LI+
Sbjct: 455 NLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGL 514
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
CK+ L AA L++EM +Q DKY +T LIDG + ++ AR E+M + G ++
Sbjct: 515 CKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDV 574
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
YN ++ + G ++ A+ +M + D FTY++++ K + A LL
Sbjct: 575 VGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCD 634
Query: 368 CLKSGVRILKSAQKAVVDG 386
+K + A ++++G
Sbjct: 635 MMKRRCQPNVVAYSSLING 653
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 168/358 (46%), Gaps = 4/358 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+IDA C+ S +L +M G PD +T+++LI+G + + + LL E
Sbjct: 370 VIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWE 429
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++ SY SL+H G+ A+ + +M+ TP TF +++GL AL
Sbjct: 430 LNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEAL 489
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +P+ YN+LI GLCK L AR +++E+ + P+ YTT++
Sbjct: 490 LVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGF 549
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
RN +I M++KG D GY +I + + G + EA + M M G D
Sbjct: 550 IRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDE 609
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y TLI Y K+G + A LL +M K+ + + ++ LI+G CK G+ A
Sbjct: 610 FTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGS 669
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKA 355
M G N+ Y ++ L K K+ A FE M + + +T S+V LC +
Sbjct: 670 MESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNS 727
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 153/356 (42%), Gaps = 4/356 (1%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 112
L DEML D +S ++ L G ++ ++ + P +N++++G C
Sbjct: 246 LYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYC 305
Query: 113 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
+ + + ++ G +P +VTY L+ L + G L +L E+ + PN
Sbjct: 306 RRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQ 365
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
Y +++ + R L +L M G D + T+I+ + GR++EA + +
Sbjct: 366 IYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRET 425
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
+ ++ SY +LI+ +C G++ A LL EM ++G D T LI GL AG +
Sbjct: 426 TRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQV 485
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 348
A L E M + YN ++ L K + A N+ E M + D + Y+++
Sbjct: 486 SEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTL 545
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ + + L A K+ + G+ A++ G G EA + S +R
Sbjct: 546 IDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMR 601
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 123/311 (39%), Gaps = 15/311 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ A ++ M E + PD Y +LI G RN L + + + M +
Sbjct: 509 VLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQK 568
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PDV YN+++ Q G +EA M P T+ ++ G K A
Sbjct: 569 GIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGA 628
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + K P +V Y+ LI G CK G A + + G PN ITYT ++
Sbjct: 629 LSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGS 688
Query: 181 CFRNRKY---KLGLE--ILSAMKRKGYTFDGF--GYCTVIAAF--------VKIGRLKEA 225
F+ K + E +L+ YT G C +A+ V +
Sbjct: 689 LFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGAL 748
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
D +V D +YN +I C L A L ++M +G++ D T L+ G
Sbjct: 749 LDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYG 808
Query: 286 LCKAGNIKGAR 296
C G + R
Sbjct: 809 FCSVGKSREWR 819
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 71/174 (40%), Gaps = 15/174 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC+ DA + M G+ P+V+TY LI + + + + ML
Sbjct: 650 LINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQ 709
Query: 62 IPPDVWSYNSLM-------------HC--LFQLGKPDEANRVFQDMICGDLTPCTATFNI 106
P+ ++ +SL+ HC L +F+ ++ P + +N
Sbjct: 710 CSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNA 769
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
++ LC + AL + + G+ P+ T+ L+ G C G+ R R IL
Sbjct: 770 IIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSREWRTILP 823
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 170/333 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LIDA C+ ++ T+ M I P+V T+NS+I G + + + +++ M+E G
Sbjct: 254 LIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKG 313
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +YN ++ G+ D A +F MI + P ++NI++NG + + D A+
Sbjct: 314 VDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAM 373
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ R + + G P +VT N+L+ GL + GR ++A+ E+ +GH P+ T+ T++
Sbjct: 374 QVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGY 433
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+N + + ++R+ + Y VI K G+L +A E++ G+ D+
Sbjct: 434 FKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDV 493
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y +I+ YC+EG L+ A +L +ME G D T+ +++ G ++ + + LE
Sbjct: 494 ITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEE 553
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
+ F ++D + +D + + I F
Sbjct: 554 IAGKSFSFEAATVELLMDIIAEDPSLLNMIPEF 586
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 168/347 (48%), Gaps = 1/347 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++IDA+C+ D ++LN M++ I PD+ TY++LI + S L EM+ +
Sbjct: 218 IVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHL 277
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P+V ++NS++ L + GK ++A + + MI + P T+N++++G D A
Sbjct: 278 NIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRA 337
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + P +++YNILI G + ++ A + +E+ G P+ +T ++
Sbjct: 338 REIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHG 397
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F + K M G+ D + +CT++ + K G ++EA + ++ +
Sbjct: 398 LFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTN 457
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I Y +I+ CK GKL+ A+ +++ G D T+T +I G C+ G + A+ L
Sbjct: 458 IQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLR 517
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS 347
M G ++ YN IV + K+ E + K SF++ +
Sbjct: 518 KMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGK-SFSFEA 563
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 193/443 (43%), Gaps = 40/443 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++++ C D G+++L + GI + V +N+L+ G + + ++ L +++
Sbjct: 112 IVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRE 171
Query: 61 GI-PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
I P+ Y ++M+ L + G +A + + M G P T ++I+++ CK+ D
Sbjct: 172 NICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDG 231
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + +++ P++ TY+ LI LCK + R + E+ PN T+ +++
Sbjct: 232 ATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVID 291
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ K + EI+ M KG D Y +I + G++ A + + M+ ++
Sbjct: 292 GLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEP 351
Query: 240 DIVSYNTLINLY------------CKE-----------------------GKLEAAYLLL 264
+I+SYN LIN Y C+E G+ ++A
Sbjct: 352 NIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFF 411
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
DEM G D YTH L+ G K G ++ A H + + D+N++ Y ++D L K+
Sbjct: 412 DEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKN 471
Query: 325 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
GK+D A FE + + D TY++M+ C+ L A +L +G
Sbjct: 472 GKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTY 531
Query: 381 KAVVDGLRHSGCRREAKKIQSKI 403
+V G S E K +I
Sbjct: 532 NVIVRGFLRSNKVSEMKAFLEEI 554
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 137/287 (47%), Gaps = 5/287 (1%)
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
D+A +FR + + +P +V+++ L+K L + + +E+ + + +
Sbjct: 54 DDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIV 113
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ C + LG +L+ +KG F+ + T++ ++K+A +++V + +
Sbjct: 114 VNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENI 173
Query: 238 -QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
+ + V Y T++N CK+G + A+ LL ME+ + + ++I+ID CK G + GA
Sbjct: 174 CEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGAT 233
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNL 352
L M + ++ Y+ ++D L K + ++ +F M + + T++S++ L
Sbjct: 234 SLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGL 293
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
CK ++ A +++ ++ GV ++DG G A++I
Sbjct: 294 CKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREI 340
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 169/355 (47%), Gaps = 39/355 (10%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E PDVVTY +++ G L ++ LLDEM G+ + Y S++ L G+
Sbjct: 280 EMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVS 339
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+A RV +DM + F +++G C A R+F +QK G + VT+ LI
Sbjct: 340 DALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALI 399
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
GLC+AG L+ A +L+E+ D G + +TYT ++
Sbjct: 400 NGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLID------------------------ 435
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
GYC K G + EA +MV V ++V+Y L + CK+G + AA L
Sbjct: 436 ----GYC-------KRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANEL 484
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
L EM +G E + YT+ LI+GLCK GN++ A + M G +++ Y ++D L K
Sbjct: 485 LHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCK 544
Query: 324 DGKIDHAINVFESM---EVKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
G+ D A N+ + M +K S TY+ +++ C + R+ KLL L+ VR
Sbjct: 545 SGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVR 599
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 191/407 (46%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ YC + +L+ M G+ + Y S+IA +S +L +L++M G
Sbjct: 293 MVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHG 352
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D + +++ G A R+F++M L T ++NGLC+ A
Sbjct: 353 VALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEAD 412
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + + G ++VTY +LI G CK G + A + E+ APN +TYT +
Sbjct: 413 RVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGL 472
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + E+L M KG + + Y ++I K G L++A M +M G + D+
Sbjct: 473 CKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDV 532
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y TLI+ CK G+ + A+ +L EM +G + T+ +L++G C +G ++G + LE+
Sbjct: 533 YTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEW 592
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKR 357
M + N+ YN ++ + D + +++ M ++ TY+ ++ CKA+
Sbjct: 593 MLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARN 652
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A ++ G+R+ S+ A++ L EA+ K+R
Sbjct: 653 MKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMR 699
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 143/284 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID YC+ + + + N M ++P+VVTY +L G + + + +LL EM
Sbjct: 432 VLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNK 491
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ +V++YNSL++ L + G ++A R+ +M T+ +++ LCK+ D A
Sbjct: 492 GLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRA 551
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
M + + G P + TYN+L+ G C +GR+ + +L+ + + PN +TY ++MK
Sbjct: 552 HNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQ 611
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K EI M + + Y +I K +KEA + ++M+ G++L
Sbjct: 612 YCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLT 671
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
SY+ LI L K+ K A + D+M +G + ++ +D
Sbjct: 672 ASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMD 715
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 159/315 (50%), Gaps = 17/315 (5%)
Query: 97 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 156
L+P + N +L+ L D A+ +FR L + ++NIL+K L AGRL+ A
Sbjct: 224 LSPSPESCNAVLSRLP----LDEAIALFRELPDKN----VCSHNILLKALLSAGRLKDAC 275
Query: 157 WILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 215
E+ P+ +TY T++ C R + + +++L M KG + Y +VIA
Sbjct: 276 QHFDEMSS---PPDVVTYGTMVHGYCVRG-ELENAVKLLDEMAAKGLESNATVYTSVIAL 331
Query: 216 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
G++ +A +E M GV LD V + T+I+ +C +G L AA L +EM+K+G D
Sbjct: 332 LCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAAD 391
Query: 276 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
+ THT LI+GLC+AG +K A L+ M G D ++ Y ++D K G + A V
Sbjct: 392 RVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHN 451
Query: 336 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
M + TY+++ LCK + +A++LL G+ + ++++GL G
Sbjct: 452 EMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFG 511
Query: 392 CRREAKKIQSKIRMA 406
+A +I +++ A
Sbjct: 512 NLEQAMRIMTEMEAA 526
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 70/182 (38%), Gaps = 35/182 (19%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ +C + G +L M E + P+VVTYNSL+
Sbjct: 572 VLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMK--------------------- 610
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+C+ + K +++ M ++ P T+NI++ G CK R A
Sbjct: 611 ------------QYCIDKNMK--STTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEA 656
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + + G +Y+ LI+ L K + AR ++ + G Y+ M
Sbjct: 657 LYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDI 716
Query: 181 CF 182
F
Sbjct: 717 SF 718
>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 143/287 (49%)
Query: 52 DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 111
D E+LE G P ++ +N LM + G+ A VF + L P +FN ++NG
Sbjct: 122 DFYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGY 181
Query: 112 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 171
K D R+ + G P++ TY+ILI GLCK G+L A + E+ D+G PN
Sbjct: 182 IKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNG 241
Query: 172 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 231
+T+TT++ +N K L +EI M +G + D Y T+I K G LK+ D +++
Sbjct: 242 VTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDE 301
Query: 232 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
M+ +G++ D +SY TLI+ CKEG LE A L ++M ++ D +T LI LC+ G
Sbjct: 302 MIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGR 361
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K A + M+
Sbjct: 362 ASDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQ 408
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 148/271 (54%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV++N+LI G + L L M
Sbjct: 141 ILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHAS 200
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV++Y+ L++ L + GK DEAN +F +M+ L P TF +++G CKN D A
Sbjct: 201 GAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLA 260
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + G P+L+TYN LI GLCK G L+ ++ E+ +G P+ I+YTT++
Sbjct: 261 MEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDG 320
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ LE+ + M ++ D Y +I+ + GR +A + +M++ G++ D
Sbjct: 321 SCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPD 380
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+Y +IN +CK+ + A LL EM++ G
Sbjct: 381 NGTYTMIINEFCKKRDSKTASKLLREMQRDG 411
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 146/299 (48%)
Query: 8 QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 67
+F F + + E G + +N L+ + + + + D + + G+ P V
Sbjct: 113 EFRYFKLVWDFYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVV 172
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
S+N+L++ +LG DE R+ M P T++I++NGLCK D A +F +
Sbjct: 173 SFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEM 232
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
+G VP VT+ LI G CK ++ A I K++ G +P+ ITY T++ + +
Sbjct: 233 LDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGEL 292
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
K +++ M G D Y T+I K G L+ A + +M+ + ++LD V+Y L
Sbjct: 293 KQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTAL 352
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
I+ C+EG+ A +L EM G + D T+T++I+ CK + K A L M + G
Sbjct: 353 ISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDG 411
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 159/344 (46%), Gaps = 10/344 (2%)
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 124
D + ++ LM + G +A + F+ + T +L L + RY +
Sbjct: 65 DFYVFSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFY 124
Query: 125 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
+ + + G+ L +NIL++ CK G +R A+ + + G P+ +++ T++ +
Sbjct: 125 KEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKL 184
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
G + SAM G D + Y +I K G+L EA + +M+ +G+ + V++
Sbjct: 185 GDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTF 244
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
TLI+ +CK K++ A + +M QG D T+ LI GLCK G +K ++ M
Sbjct: 245 TTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIM 304
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAIN-----VFESMEVKDSFTYSSMVHNLCKAKRLP 359
G + +Y ++D K+G ++ A+ + ES+ + D Y++++ LC+ R
Sbjct: 305 NGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRL-DDVAYTALISCLCREGRAS 363
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A K+L L G++ +++ C++ K SK+
Sbjct: 364 DAEKMLREMLSVGLKPDNGTYTMIINEF----CKKRDSKTASKL 403
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ D I +M G+SPD++TYN+LI G + L DL+DEM+ G
Sbjct: 247 LIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD SY +L+ + G + A + MI + + +++ LC+ +A
Sbjct: 307 LKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAE 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+M R + G P+ TY ++I CK +TA +L+E+ G P +T
Sbjct: 367 KMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPLPGVVT 418
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 191/390 (48%), Gaps = 17/390 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+AY + + + MR+ PD+ +N ++ R +L + ++ML+
Sbjct: 133 VLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKC 192
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PDV +Y L+H L + K +A +F +M + P ++I+L+GLC+ + +A
Sbjct: 193 NLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDA 252
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+F ++ G +L+TYN+L+ G CK+G L A +L+ L GH I Y ++
Sbjct: 253 QRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLING 312
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
FR R+Y+ M R+ D Y +I + GR+ EA + +M G++ D
Sbjct: 313 LFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPD 372
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ YN LI +C G L+ A L E+ K + +T++ILI G+CK G I A+ +
Sbjct: 373 TICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFK 432
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-----------------VKDSF 343
M K+G ++ +N +++ L K +++ A +F ME V D
Sbjct: 433 EMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIA 492
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ M+ LC++ + A KLL+ + SGV
Sbjct: 493 SLQVMMERLCESGMILKAYKLLMQLVDSGV 522
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 179/360 (49%), Gaps = 6/360 (1%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
+F+ + +L ++ + I ++ LI + + +++ M + PD++++N
Sbjct: 108 AFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFN 167
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
++H L + A V+ M+ +L P T+ I+++GLCK T +AL +F +
Sbjct: 168 LILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDR 227
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G +P + Y+I++ GLC+A ++ A+ + ++ SG + ITY ++ ++
Sbjct: 228 GILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDA 287
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+L + + G+ GY +I + R +EA + ++M+ + ++ D++ Y +I
Sbjct: 288 FTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRG 347
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLEYMNKIGFDS 309
+EG++ A LL EM ++G D + LI G C G + A L LE F +
Sbjct: 348 LSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPN 407
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
N Y+ ++ + K+G I+ A ++F+ ME + T++S+++ LCKA RL A L
Sbjct: 408 N-HTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLF 466
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 187/426 (43%), Gaps = 52/426 (12%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
+F + N+M + ++PDVVTY LI G + +L L DEM + GI P+ Y+
Sbjct: 178 AFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYS 237
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
++ L Q K +A R+F M T+N++LNG CK+ Y D+A + + L K
Sbjct: 238 IVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKD 297
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G + ++ Y LI GL +A R A +++ P+ + YT +++ + +
Sbjct: 298 GHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEA 357
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY---------------------- 228
L +L M +G D Y +I F +G L EA
Sbjct: 358 LTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICG 417
Query: 229 -------------MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME------- 268
++M G +V++N+LIN CK +LE A LL +ME
Sbjct: 418 MCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSL 477
Query: 269 ----KQGFE--CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
QG + D + ++++ LC++G I A L + G ++ YN +++
Sbjct: 478 FLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFC 537
Query: 323 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
K G I+ A +F+ M++K DS TY +++ L +A R A ++ +K G S
Sbjct: 538 KFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESS 597
Query: 379 AQKAVV 384
K ++
Sbjct: 598 TYKTIM 603
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 175/388 (45%), Gaps = 19/388 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ CQ + ++MR +G + D++TYN L+ G ++ L + LL + +
Sbjct: 238 IVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKD 297
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G V Y L++ LF+ + +EA+ +Q M+ ++ P + IM+ GL + A
Sbjct: 298 GHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEA 357
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + + G P+ + YN LIKG C G L A + E+ PN TY+ ++
Sbjct: 358 LTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICG 417
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV------- 233
+N I M++ G + ++I K RL+EA QM
Sbjct: 418 MCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSL 477
Query: 234 -------TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
TD V DI S ++ C+ G + AY LL ++ G D T+ ILI+G
Sbjct: 478 FLRLSQGTDKV-FDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGF 536
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDS 342
CK GNI GA + M G + Y ++D L + G+ + A+ +FE M V +S
Sbjct: 537 CKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPES 596
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLK 370
TY +++ C+ + A + + L+
Sbjct: 597 STYKTIMTWSCRENNISLALSVWMKYLR 624
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 156/348 (44%), Gaps = 18/348 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C D ++ + + P+ TY+ LI G +N L++ + + EM ++G
Sbjct: 379 LIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLG 438
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-------------GDLTPCTATFNIML 108
P V ++NSL++ L + + +EA +F M D A+ +M+
Sbjct: 439 CLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMM 498
Query: 109 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
LC++ A ++ L G +P++ TYNILI G CK G + A + KE+ GH
Sbjct: 499 ERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHM 558
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
P+++TY T++ +R + + LEI M +KG + Y T++ + + A
Sbjct: 559 PDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSV 618
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+ + D + + + E +L+ A L EM+ + D +TI + GL +
Sbjct: 619 WMKYLRDFRGWEDEKVRVVAESFDNE-ELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQ 677
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCI--VDRLGKDGKIDHAINVF 334
A A + F N+ + +C+ + RL +D A++VF
Sbjct: 678 AKRDCEAFAIFSVLKD--FKMNISSASCVMLIGRLCMVENLDMAMDVF 723
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 134/322 (41%), Gaps = 39/322 (12%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 112
+L E+ I +++ L+ + G ++A F M D P FN++L+ L
Sbjct: 115 VLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLV 174
Query: 113 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
+ AL ++ + K P++VTY ILI GLCK + + A + E+ D G PN I
Sbjct: 175 RKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQI 234
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
Y+ ++ G C F +A +M
Sbjct: 235 IYSIVLS----------------------------GLCQAKKIF-------DAQRLFSKM 259
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
G D+++YN L+N +CK G L+ A+ LL + K G + LI+GL +A
Sbjct: 260 RASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRY 319
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 348
+ A + + M + ++ Y ++ L ++G++ A+ + M + D+ Y+++
Sbjct: 320 EEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNAL 379
Query: 349 VHNLCKAKRLPSASKLLLSCLK 370
+ C L A L L K
Sbjct: 380 IKGFCDMGYLDEAESLRLEISK 401
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 131/308 (42%), Gaps = 4/308 (1%)
Query: 100 CTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL 159
C ++++ L K + ++ + L+ +++LI+ +AG A
Sbjct: 92 CRTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESF 151
Query: 160 KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 219
+ D P+ + I+ R + L L + + M + D Y +I K
Sbjct: 152 SLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKT 211
Query: 220 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
+ ++A ++M G+ + + Y+ +++ C+ K+ A L +M G D T+
Sbjct: 212 CKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITY 271
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-- 337
+L++G CK+G + A L+ + K G + Y C+++ L + + + A ++ M
Sbjct: 272 NVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLR 331
Query: 338 -EVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
+K D Y+ M+ L + R+ A LL + G+R A++ G G E
Sbjct: 332 ENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDE 391
Query: 396 AKKIQSKI 403
A+ ++ +I
Sbjct: 392 AESLRLEI 399
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 4/156 (2%)
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
KE E + +L E++ + ++LI+ +AG + A M +L
Sbjct: 105 KENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLF 164
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
A+N I+ L + A+ V+ M D TY ++H LCK + A L
Sbjct: 165 AFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEM 224
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
G+ + V+ GL + +A+++ SK+R
Sbjct: 225 TDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMR 260
>gi|357460285|ref|XP_003600424.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489472|gb|AES70675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 393
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 176/358 (49%), Gaps = 20/358 (5%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
LN + + PDVV YN++I ++ L+S DL EM++ I PDV +YN+L++ L
Sbjct: 27 LNHIERLLVKPDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLN 86
Query: 79 --------------LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 124
LG+ EA + M +TP TF +++GLCK+ A +
Sbjct: 87 FVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVL 146
Query: 125 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
+ K P +VTYN L+ G + A+ + + G PN +Y ++ +N
Sbjct: 147 AIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKN 206
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
+ + M K D Y ++I K R+ + D++ +M G +I++Y
Sbjct: 207 KMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITY 266
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLEYMN 303
N+L++ CK +++ A LL +++ QG + YT+TIL+DGLCK G ++ A+ ++ + +N
Sbjct: 267 NSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLN 326
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
K G+ + Y +++ L K+G +D A+++ ME D TY + L ++ R
Sbjct: 327 K-GYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITIRALFESDR 383
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 149/272 (54%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+LN+M ++P++ T+ +L+ G ++ + + ++L M++ + P++ +YNSLM F
Sbjct: 110 LLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYF 169
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ + ++A ++F + +TP ++ +M+NGLCKN+ D A +F+ + VP+ V
Sbjct: 170 LVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTV 229
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
YN LI GLCK+ R+ + E+ D G N ITY +++ +N + + +L+ +
Sbjct: 230 AYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKI 289
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K +G + + Y ++ K GRL++A + + ++ G QLD Y +IN CKEG L
Sbjct: 290 KNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFL 349
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
+ A LL +ME D T+ I I L ++
Sbjct: 350 DEALSLLSKMEDNKCTPDGVTYEITIRALFES 381
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 147/324 (45%), Gaps = 18/324 (5%)
Query: 99 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK-------------- 144
P +N +++ LCK++ + ++ + P++VTYN LI
Sbjct: 37 PDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEY 96
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
G G+++ A +L ++ PN T+TT++ ++ + K +L+ M ++
Sbjct: 97 GFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEP 156
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ Y +++ + + + +A + G+ ++ SY +IN CK ++ A L
Sbjct: 157 NIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLF 216
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
EM + D + LIDGLCK+ I + M+ G +N+ YN ++D L K+
Sbjct: 217 KEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKN 276
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
++D AI + ++ + + +TY+ +V LCK RL A ++ L G ++
Sbjct: 277 HQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIY 336
Query: 381 KAVVDGLRHSGCRREAKKIQSKIR 404
+++GL G EA + SK+
Sbjct: 337 TVMINGLCKEGFLDEALSLLSKME 360
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 94/186 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ D + M + PD V YNSLI G ++ + D + EM +
Sbjct: 198 VMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDR 257
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P ++ +YNSL+ L + + D+A + + + P T+ I+++GLCKN +A
Sbjct: 258 GQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDA 317
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ L G+ + Y ++I GLCK G L A +L ++ D+ P+ +TY ++
Sbjct: 318 QEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITIRA 377
Query: 181 CFRNRK 186
F + +
Sbjct: 378 LFESDR 383
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 141/320 (44%), Gaps = 28/320 (8%)
Query: 108 LNGLCKNRYTDNALRMFRGLQKHGF----------VPELVTYNILIKGLCKAGRLRTARW 157
+ GLC N AL + GF P++V YN +I LCK +
Sbjct: 1 MKGLCLNGEVRKALYFHDHVIAKGFHLNHIERLLVKPDVVMYNTIIDILCKDKLVSDGCD 60
Query: 158 ILKELGDSGHAPNAITYTTI----MKCCFRNRKYKLGLEILSAMKR----------KGYT 203
+ E+ D P+ +TY T+ + + + + G IL MK K T
Sbjct: 61 LYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVT 120
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
+ + T++ K G +K+A + + M+ V+ +IV+YN+L++ Y ++ A L
Sbjct: 121 PNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQL 180
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
+ + +G + ++ ++I+GLCK + A + M+ + AYN ++D L K
Sbjct: 181 FNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCK 240
Query: 324 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
+I + M + + TY+S++ LCK ++ A LL G+R
Sbjct: 241 SRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYT 300
Query: 380 QKAVVDGLRHSGCRREAKKI 399
+VDGL +G R+A+++
Sbjct: 301 YTILVDGLCKNGRLRDAQEV 320
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 167/326 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LIDA C+ ++ T+ M I P+V T+NS+I G + + + +++ M+E G
Sbjct: 254 LIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKG 313
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +YN ++ G+ D A +F MI + P ++NI++NG + + D A+
Sbjct: 314 VDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAM 373
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ R + + G P +VT N+L+ GL + GR ++A+ E+ +GH P+ T+ T++
Sbjct: 374 QVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGY 433
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+N + + ++R+ + Y VI K G+L +A E++ G+ D+
Sbjct: 434 FKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDV 493
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y +I+ YC+EG L+ A +L +ME G D T+ +++ G ++ + + LE
Sbjct: 494 ITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEE 553
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKI 327
+ F ++D + +D I
Sbjct: 554 IAGKSFSFEAATVELLMDIIAEDPSI 579
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 169/347 (48%), Gaps = 1/347 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++IDA+C+ D ++LN M++ I PD+ TY++LI + S L EM+ +
Sbjct: 218 IVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHL 277
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P+V ++NS++ L + GK ++A + + MI + P T+N++++G D A
Sbjct: 278 NIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRA 337
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + P++++YNILI G + ++ A + +E+ G P+ +T ++
Sbjct: 338 REIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHG 397
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F + K M G+ D + +CT++ + K G ++EA + ++ +
Sbjct: 398 LFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTN 457
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I Y +I+ CK GKL+ A+ +++ G D T+T +I G C+ G + A+ L
Sbjct: 458 IQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLR 517
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS 347
M G ++ YN IV + K+ E + K SF++ +
Sbjct: 518 KMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGK-SFSFEA 563
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 193/443 (43%), Gaps = 40/443 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++++ C D G+++L + GI + VT+ +LI G + + ++ L +++
Sbjct: 112 IVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRE 171
Query: 61 GI-PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
I P+ Y ++M+ L + G +A + + M G P T T+ I+++ CK+ D
Sbjct: 172 NICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDG 231
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + +++ P++ TY+ LI LCK + R + E+ PN T+ +++
Sbjct: 232 ATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVID 291
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ K + EI+ M KG D Y +I + G++ A + + M+ ++
Sbjct: 292 GLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEP 351
Query: 240 DIVSYNTLINLY------------CKE-----------------------GKLEAAYLLL 264
DI+SYN LIN Y C+E G+ ++A
Sbjct: 352 DIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFF 411
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
DEM G D YTH L+ G K G ++ A H + + D+N++ Y ++D L K+
Sbjct: 412 DEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKN 471
Query: 325 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
GK+D A FE + + D TY++M+ C+ L A +L +G
Sbjct: 472 GKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTY 531
Query: 381 KAVVDGLRHSGCRREAKKIQSKI 403
+V G S E K +I
Sbjct: 532 NVIVRGFLRSNKVSEMKAFLEEI 554
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 174/395 (44%), Gaps = 7/395 (1%)
Query: 9 FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRN-SLLSCSLDLLDEMLEMGIPPDVW 67
F SF A Y+I R V N ++ +N L + L +M+ P V
Sbjct: 15 FFSFFA-YSIAPRHYSTNTCSISVKGNFGVSNEFQNVKCLDDAFSLFRQMVRTKPLPSVA 73
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
S++ L+ + + +F+++ + +I++N C TD +
Sbjct: 74 SFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIH 133
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL-GDSGHAPNAITYTTIMKCCFRNRK 186
K G VT+ LI+GL +++ A + K+L ++ PN + Y T+M +
Sbjct: 134 FKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGH 193
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
+ ++L M++ + Y VI AF K G L AT + +M + DI +Y+T
Sbjct: 194 TQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYST 253
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
LI+ CK + E L EM + T +IDGLCK G ++ A + YM + G
Sbjct: 254 LIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKG 313
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 362
D ++ YN I+D G G++D A +F+SM K D +Y+ +++ + K++ A
Sbjct: 314 VDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAM 373
Query: 363 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
++ + G++ ++ GL G + A+
Sbjct: 374 QVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQ 408
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 191/436 (43%), Gaps = 75/436 (17%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ + C D T+ + +R ++PD +TY++L+ G + L +LDLLDEM
Sbjct: 163 IVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRS 222
Query: 61 GIPPDVWSYNSLMHCLFQLG------------------KPD------------------E 84
+ PDV YN+L+ F+ G +P+ E
Sbjct: 223 RVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKE 282
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
V++ M+ +L P T+ I+++GLC++ D A R++ + K G V + YN L+K
Sbjct: 283 VGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVK 342
Query: 145 GLCKAGR------------------LRTARWILKELGDSGHA-----------------P 169
G C+AGR LRT ++K L DSG P
Sbjct: 343 GFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIP 402
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
+ +T+ T++ +N I + G D F Y ++I +GRL +A
Sbjct: 403 DTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVY 462
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
E+M DG + + YN LI+ +C+ + A + +M G T+ LIDGLCKA
Sbjct: 463 EKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKA 522
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 345
+ A M + GF ++ Y ++ L D KID A+++++ + K D +
Sbjct: 523 EKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMH 582
Query: 346 SSMVHNLCKAKRLPSA 361
+ ++H LC A ++ A
Sbjct: 583 NILIHGLCSAGKVDEA 598
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 175/356 (49%), Gaps = 15/356 (4%)
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD----LTPCTATFNIMLNGLCKNR 115
+G P + S+N+L+ + + +A+ F + G + P T+NI+L LC
Sbjct: 113 LGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARG 172
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D A+ +F L++ P+ +TY+ L+ GL K RL A +L E+ S P+ + Y
Sbjct: 173 DLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYN 232
Query: 176 TIMKCCFRNRKYKLGLEILSAM-KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
++ CF+ +++ + + + K G + Y ++ K GR KE + E+MV
Sbjct: 233 ALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVA 292
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
+ +Q D+++Y LI+ C+ G ++ A + E+ K G D + L+ G C+AG ++
Sbjct: 293 NNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQE 352
Query: 295 ARLHLEYMNKIGFDS--NLEAYNCIVDRLGKDGKIDHAINVFESME-----VKDSFTYSS 347
A ++ + GF NL YN ++ L G +D AI +++ +E + D+ T+ +
Sbjct: 353 A---WKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGT 409
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++H LC+ A + SG ++ + ++++GL + G +A K+ K+
Sbjct: 410 LIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKM 465
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 154/301 (51%), Gaps = 3/301 (0%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
PD VT+ +LI G +N + + + +E G DV+SY+S+++ L +G+ +A +V
Sbjct: 402 PDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKV 461
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
++ M P + +N +++G C+ T +A+R++ + +G P ++TYN LI GLCK
Sbjct: 462 YEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCK 521
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
A + + A + +E+ ++G P+ TY ++++ F ++K L I + KG D
Sbjct: 522 AEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMM 581
Query: 209 YCTVIAAFVKIGRLKEATDYMEQM-VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
+ +I G++ EA M ++V+YNTL++ + G ++ A L +
Sbjct: 582 HNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSI 641
Query: 268 EKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
+ G E D ++ I GLC I +G +L E +++ G + +N +V + K G
Sbjct: 642 TEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSR-GIIPTVITWNILVRAVIKYGP 700
Query: 327 I 327
I
Sbjct: 701 I 701
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 165/339 (48%), Gaps = 5/339 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ +CQ + + AG+ ++ TYN +I G + ++ +++L D +LE
Sbjct: 340 LVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWD-LLEKD 397
Query: 62 IP--PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ PD ++ +L+H L Q G ++A +F++ +++ M+NGLC +
Sbjct: 398 VACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVD 457
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A++++ + K G P YN LI G C+ R A I ++ D+G +P ITY T++
Sbjct: 458 AVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLID 517
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ KY+ + M G+T D Y ++I ++ +A +Q++ G+++
Sbjct: 518 GLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKV 577
Query: 240 DIVSYNTLINLYCKEGKL-EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D++ +N LI+ C GK+ EA ++ D EK+ + T+ L+DGL + G I A
Sbjct: 578 DVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATL 637
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
+ + G + ++ +YN + L +I I + + +
Sbjct: 638 WTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEV 676
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 138/293 (47%), Gaps = 1/293 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI CQ + +TI R +G DV +Y+S+I G L ++ + ++M + G
Sbjct: 410 LIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDG 469
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ YN+L+ Q+ + +A R++ M +P T+N +++GLCK A
Sbjct: 470 CKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEAS 529
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ R + ++GF P++ TY LI+GL ++ A I K++ G + + + ++
Sbjct: 530 SVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGL 589
Query: 182 FRNRKYKLGLEILSAMK-RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K L + S MK +K + Y T++ + G + +A + DG++ D
Sbjct: 590 CSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPD 649
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
I+SYNT I C ++ LLDE+ +G T IL+ + K G I+
Sbjct: 650 IISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 161/331 (48%), Gaps = 5/331 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID +C F + +L M E I+PDV+T+N+LI+ + + L + L DEML
Sbjct: 332 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 391
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD +YNS+++ + + D+A +F M +P TFN +++ C+ + D +
Sbjct: 392 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGM 447
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ R + + G V TYN LI G C+ L A+ + +E+ G P+ IT ++
Sbjct: 448 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 507
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N K + LE+ ++ D Y +I K ++ EA D + GV+ D+
Sbjct: 508 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 567
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN +I+ +C + + A +L +M+ G E D T+ LI G KAG I + +
Sbjct: 568 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 627
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
M GF + + D L DG++D + +
Sbjct: 628 MRSNGFSGDAFTIKMVAD-LITDGRLDKSFS 657
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 181/368 (49%), Gaps = 8/368 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ + +L++M E I PDVV Y+++I ++ S + L EMLE G
Sbjct: 262 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 321
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V++YN ++ G+ +A R+ +DMI ++ P TFN +++ K A
Sbjct: 322 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 381
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + P+ VTYN +I G CK R A K + D +P+ +T+ TI+
Sbjct: 382 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVY 437
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R ++ G+++L + R+G + Y T+I F ++ L A D ++M++ GV D
Sbjct: 438 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 497
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++ N L+ +C+ KLE A L + ++ + D + I+I G+CK + A
Sbjct: 498 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 557
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G + +++ YN ++ I A +F M+ D+ TY++++ KA
Sbjct: 558 LPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGE 617
Query: 358 LPSASKLL 365
+ + +L+
Sbjct: 618 IDKSIELI 625
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 197/432 (45%), Gaps = 45/432 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL--------- 51
+LI +C + ++ + G PDVVT+N+L+ G +S +L
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 52 -DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 110
L D+M+E+G+ P V ++N+L++ L G+ EA + M+ L T+ ++NG
Sbjct: 206 GSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNG 265
Query: 111 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
+CK T +AL + +++ P++V Y+ +I LCK G A+++ E+ + G APN
Sbjct: 266 MCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 325
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
TY ++ ++ +L M + D + +I+A VK G+L EA +
Sbjct: 326 VFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCD 385
Query: 231 QMV-----TDGVQL--------------------------DIVSYNTLINLYCKEGKLEA 259
+M+ D V D+V++NT+I++YC+ +++
Sbjct: 386 EMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDE 445
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
LL E+ ++G + T+ LI G C+ N+ A+ + M G + N ++
Sbjct: 446 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLY 505
Query: 320 RLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
++ K++ A+ +FE +++ D+ Y+ ++H +CK ++ A L S GV
Sbjct: 506 GFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP 565
Query: 376 LKSAQKAVVDGL 387
++ G
Sbjct: 566 DVQTYNVMISGF 577
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 184/410 (44%), Gaps = 18/410 (4%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D ++ +M I ++ ++N LI LS SL ++ ++G PDV ++N+L
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182
Query: 73 MH----------CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
+H L G E +F M+ LTP TFN ++NGLC A
Sbjct: 183 LHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 242
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ + G ++VTY ++ G+CK G ++A +L ++ ++ P+ + Y+ I+
Sbjct: 243 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 302
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
++ + + S M KG + F Y +I F GR +A + M+ + D++
Sbjct: 303 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 362
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
++N LI+ KEGKL A L DEM + D T+ +I G CK A+ + M
Sbjct: 363 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 422
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRL 358
++ +N I+D + ++D + + + V ++ TY++++H C+ L
Sbjct: 423 AS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 478
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+A L + GV ++ G + EA ++ I+M+KI
Sbjct: 479 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 528
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 174/413 (42%), Gaps = 16/413 (3%)
Query: 9 FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 68
F S D + M + V N +I R + ++ L +M IP +++S
Sbjct: 84 FKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS 143
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL------- 121
+N L+ C K + F + P TFN +L+GLC AL
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 122 ---RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
+F + + G P ++T+N LI GLC GR+ A ++ ++ G + +TY TI+
Sbjct: 204 ETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 263
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ K L +LS M+ D Y +I K G +A +M+ G+
Sbjct: 264 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 323
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARL 297
++ +YN +I+ +C G+ A LL +M ++ D T LI K G + + +L
Sbjct: 324 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 383
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKR 357
E +++ F + YN ++ K + D A ++F+ M D T+++++ C+AKR
Sbjct: 384 CDEMLHRCIFPDTV-TYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKR 442
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
+ +LL + G+ A + L H C + + ISH
Sbjct: 443 VDEGMQLLREISRRGL----VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 491
>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
Length = 662
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 184/395 (46%), Gaps = 22/395 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+DA C+ + + + RM + G++P VVT+ LI G R +L EM ++
Sbjct: 51 VLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQL 110
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ YN L+ + G +A R+F +M+ + P T+N++ LCK + A
Sbjct: 111 GVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERA 170
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLC-KAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
R+ + G +N ++ L + RL + I E+ G PN T M+
Sbjct: 171 ERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMR 230
Query: 180 CCFRNRKY-----------------KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
+ K+ K +++ M KG D Y +I K ++
Sbjct: 231 ELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKM 290
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
+EA M G + D+ ++NTL++ YC GK+E + LLD+M+ +G + D ++ +
Sbjct: 291 EEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTI 350
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 340
IDG CKA +I+ A+ +L + G N+ YN ++ G++G I AI+ E+M+
Sbjct: 351 IDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGI 410
Query: 341 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ TY S+++ +C A + A + ++ V
Sbjct: 411 QPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNV 445
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 190/421 (45%), Gaps = 22/421 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ + F +L M + G+SP+ V YN LI R S +L L DEM+
Sbjct: 86 ILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLK 145
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC-KNRYTDN 119
+ P +YN + L + G+ + A R+ +DM+ +T FN ++ L + R ++
Sbjct: 146 KMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLES 205
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGR-----------------LRTARWILKEL 162
+ + + G P ++ LCK G+ ++ A +++ +
Sbjct: 206 VVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTM 265
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
+ G ++ITY +++ C ++ K + +++ M R+G+ D F + T++ A+ +G++
Sbjct: 266 LNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKM 325
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
+E ++QM T+G+Q DIVSY T+I+ +CK + A L E+ +G + + + + L
Sbjct: 326 EETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNAL 385
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD- 341
I G + G+I GA +E M G Y ++ + G ++ A +F +
Sbjct: 386 IGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNV 445
Query: 342 ---SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
Y+ M+ CK ++ A G+ K ++ SG EA K
Sbjct: 446 DLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASK 505
Query: 399 I 399
+
Sbjct: 506 L 506
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 167/371 (45%), Gaps = 22/371 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGA-TRNSLLSCSLDLLDEMLE 59
++ A C+ + IL M G++ +N+++A R L + + +EM+
Sbjct: 156 LIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVT 215
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEA-----------------NRVFQDMICGDLTPCTA 102
G+ P+ + M L + GK EA +V Q M+ + +
Sbjct: 216 RGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSI 275
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
T+NIM+ G CK+ + A+++ + + GF P+L T+N L+ C G++ +L ++
Sbjct: 276 TYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQM 335
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
G P+ ++Y TI+ + + + E L+ + +G + F Y +I + + G +
Sbjct: 336 KTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDI 395
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
A D +E M ++G+Q V+Y +L+ C G +E A + + + + +TI+
Sbjct: 396 SGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIM 455
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----E 338
I G CK G + A + E M G N Y ++ K G + A +F+ M
Sbjct: 456 IQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGV 515
Query: 339 VKDSFTYSSMV 349
+ D+ TY +++
Sbjct: 516 IPDNITYGTLI 526
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 112
++ ML GI D +YN ++ + K +EA ++ DM P TFN +L+ C
Sbjct: 261 VIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYC 320
Query: 113 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
+ + ++ G P++V+Y +I G CKA +R A+ L EL D G PN
Sbjct: 321 NLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVF 380
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
Y ++ RN ++ + MK G Y +++ G ++EA Q
Sbjct: 381 IYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQA 440
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
+ V L ++ Y +I YCK GK+ A +EM +G +K T+T L+ K+GN
Sbjct: 441 RENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNS 500
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+ A + M G + Y ++ R + G
Sbjct: 501 EEASKLFDEMVGSGVIPDNITYGTLIARCSEKG 533
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 159/359 (44%), Gaps = 22/359 (6%)
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
+SY +++ L + GK D + ++ L P T+N++++ LCK+ + A R+
Sbjct: 12 YSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGR 71
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
+++ G P +VT+ ILI GL + R +L+E+ G +PN + Y ++ R
Sbjct: 72 MEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGH 131
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
L + M K Y + A K G ++ A +E M++ G+ + +NT
Sbjct: 132 CSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNT 191
Query: 247 LIN-LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-------------- 291
++ L + +LE+ + +EM +G + T + LCK G
Sbjct: 192 VVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNK 251
Query: 292 ---IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 344
+K A ++ M G + + YN ++ KD K++ AI + M + D FT
Sbjct: 252 GKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFT 311
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+++++H C ++ LL G++ + ++DG + R+AK+ +++
Sbjct: 312 FNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTEL 370
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 124/279 (44%), Gaps = 50/279 (17%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ AYC + + +L++M+ G+ PD+V+Y ++I G + + + + L E+++ G
Sbjct: 315 LLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRG 374
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V+ YN+L+ + G A + M + P T+ ++ +C + A
Sbjct: 375 LKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAK 434
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++ ++ Y I+I+G CK G++ A +E+ G +PN +TYTT+M
Sbjct: 435 TIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLM--- 491
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
A+ K G +EA+ ++MV GV D
Sbjct: 492 --------------------------------YAYSKSGNSEEASKLFDEMVGSGVIPDN 519
Query: 242 VSYNTLI---------------NLYCKEGKLEAAYLLLD 265
++Y TLI L+C KL +A ++D
Sbjct: 520 ITYGTLIARCSEKGGKTTQYGQELHCDLSKLLSADWIMD 558
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 168/355 (47%), Gaps = 39/355 (10%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M G PD+ TYN+LI G + L + +L++EM G P+V +Y L+ + G+
Sbjct: 5 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
+EA V +M L +N +++ LCK+ +AL MF + G P++ T+N
Sbjct: 65 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
LI GLCK + A + +++ G N ITY T+
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL------------------------ 160
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
I AF++ G ++EA + M+ G LD ++YN LI C+ G +E
Sbjct: 161 -----------IHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGL 209
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
L ++M +G + + ILI+GLC+ GNI+ A L M G ++ YN +++ L
Sbjct: 210 ALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGL 269
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
K G+ A+N+F+ ++V+ D+ TY++++ CK A LL + SG
Sbjct: 270 CKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSG 324
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 153/291 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID +C+ + +L+ M G++ + V YN LI+ ++ + +L++ +M
Sbjct: 54 ILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSK 113
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD++++NSL+ L ++ K +EA ++QDM+ + T T+N +++ + A
Sbjct: 114 GCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEA 173
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L++ + G + +TYN LIK LC+AG + + +++ G PN I+ ++
Sbjct: 174 LKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILING 233
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + LE L M +G T D Y ++I K GR +EA + +++ +G+ D
Sbjct: 234 LCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPD 293
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
++YNTLI+ +CKEG + A+LLL GF ++ T IL+ K G+
Sbjct: 294 AITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 344
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 152/324 (46%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + ++N M+ G P+V+TY LI + L + ++LDEM G
Sbjct: 20 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 79
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ + YN L+ L + K +A +F DM P TFN ++ GLCK + AL
Sbjct: 80 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 139
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + G + +TYN LI + G ++ A ++ ++ G + ITY ++K
Sbjct: 140 GLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKAL 199
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + GL + M KG + +I + G ++ A +++ M+ G+ DI
Sbjct: 200 CRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDI 259
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN+LIN CK G+ + A L D+++ +G D T+ LI CK G A L L
Sbjct: 260 VTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSR 319
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDG 325
GF N + +V K+G
Sbjct: 320 GVDSGFIPNEVTWYILVSNFIKEG 343
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
M + G P++ TYN LI GLCK G L +AR ++ E+ G PN ITYT ++
Sbjct: 1 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA--------------------------- 215
+ + + +L M KG + GY +I+A
Sbjct: 61 KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120
Query: 216 --------FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
K+ + +EA + M+ +GV + ++YNTLI+ + + G ++ A L+++M
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
+G D T+ LI LC+AGNI+ E M G + N + N +++ L + G I
Sbjct: 181 LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 240
Query: 328 DHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 365
HA+ M D TY+S+++ LCK R A L
Sbjct: 241 QHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLF 282
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 188/388 (48%), Gaps = 17/388 (4%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
P +YN ++ + + ++ +ML GI P V+++ +M + + D A
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ +DM P + + ++++ L +N + A+++ + G P++ T+N +I GL
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CKAGR+ A + + +A+ +M R K +LS +
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVL-- 338
Query: 207 FGYCTVIAAFVKIGRLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y T+I +V GR +EA D + + MV G + D ++N +I+ CK+G L +A LD
Sbjct: 339 --YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLD 396
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM K+GFE + T+TILIDG CK G+ + A + M+ G N YNC++ L KDG
Sbjct: 397 EMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDG 456
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
KI A+ ++ M K D +T++S+++ LCK ++ A L L GV A
Sbjct: 457 KIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGV----IANT 512
Query: 382 AVVDGLRHSGCR----REAKKIQSKIRM 405
+ L H+ R ++A K+ ++R
Sbjct: 513 VTYNTLIHAFLRLELIQQADKLVGEMRF 540
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 192/445 (43%), Gaps = 71/445 (15%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ A+C D+ ++L M + G P+ + Y LI + N+ ++ ++ LL+EM M
Sbjct: 205 VVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLM 264
Query: 61 GIPPDVWSYNS-----------------------------------LMHCLFQLGKPDEA 85
G PDV ++N LMH L ++GK DEA
Sbjct: 265 GCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEA 324
Query: 86 --------------------------------NRVFQDMICGDLTPCTATFNIMLNGLCK 113
+ ++++M+ P TFNIM++GLCK
Sbjct: 325 RAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCK 384
Query: 114 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
Y +AL + K GF P ++TY ILI G CK G A ++ + G + N +
Sbjct: 385 KGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVG 444
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
Y ++ ++ K + L++ M KG D + + ++I K +++EA M+
Sbjct: 445 YNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDML 504
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
+GV + V+YNTLI+ + + ++ A L+ EM +G D T+ LI LCK G +
Sbjct: 505 LEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATE 564
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMV 349
+E M ++ + N +++ + GK++ A+ M D TY+S++
Sbjct: 565 KCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLI 624
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVR 374
+ LCK R A L G+
Sbjct: 625 NGLCKMGRFQEALNLFNGLQAKGIH 649
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 175/358 (48%), Gaps = 5/358 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNR-MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
LI+ Y F+ +L + M AG PD T+N +I G + L +L+ LDEM++
Sbjct: 342 LINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKK 401
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V +Y L+ + G +EA++V M L+ T +N ++ LCK+ +A
Sbjct: 402 GFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDA 461
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L+M+ + G P++ T+N LI GLCK ++ A + +++ G N +TY T++
Sbjct: 462 LQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHA 521
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + +++ M+ +G D Y +I A K G ++ +EQM + +
Sbjct: 522 FLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPS 581
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I S N LIN +C+ GK+ A L +M ++G D T+ LI+GLCK G + A
Sbjct: 582 INSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFN 641
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN-VFESME---VKDSFTYSSMVHNLCK 354
+ G + YN ++ R +G + A +F+ + + + T+S +++ K
Sbjct: 642 GLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVK 699
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 145/288 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID +C+ F+ ++N M G+S + V YN LI ++ + +L + EM
Sbjct: 412 ILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSK 471
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD++++NSL++ L + K +EA +++DM+ + T T+N +++ + A
Sbjct: 472 GCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQA 531
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ ++ G + +TYN LIK LCK G +++++ P+ + ++
Sbjct: 532 DKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINS 591
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R K L+ L M ++G T D Y ++I K+GR +EA + + G+ D
Sbjct: 592 FCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPD 651
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
V+YNTLI+ YC EG A LL + GF ++ T +ILI+ K
Sbjct: 652 AVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVK 699
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 141/291 (48%), Gaps = 2/291 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ + L+ M + G P+V+TY LI G + + +++ M
Sbjct: 377 IMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAK 436
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + YN L+ L + GK +A +++ +M P TFN ++ GLCKN + A
Sbjct: 437 GLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEA 496
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L ++R + G + VTYN LI + ++ A ++ E+ G + ITY ++K
Sbjct: 497 LGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKA 556
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV-IAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + L ++ M + F C + I +F + G++ +A ++ M+ G+
Sbjct: 557 LCKTGATEKCLGLIEQMFGEE-IFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTP 615
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
DIV+YN+LIN CK G+ + A L + ++ +G D T+ LI C G
Sbjct: 616 DIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEG 666
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 128/271 (47%), Gaps = 2/271 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI A C+ + M G PD+ T+NSLI G +N + +L L +ML G
Sbjct: 448 LIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEG 507
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ + +YN+L+H +L +A+++ +M T+N ++ LCK T+ L
Sbjct: 508 VIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCL 567
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + P + + NILI C+ G++ A L+++ G P+ +TY +++
Sbjct: 568 GLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGL 627
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +++ L + + ++ KG D Y T+I+ + G +A + + V++G +
Sbjct: 628 CKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNE 687
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
++++ LIN + K + +L M GF
Sbjct: 688 ITWSILINYFVKNNSDSEQFTIL--MGNWGF 716
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 141/338 (41%), Gaps = 49/338 (14%)
Query: 80 GKPDEANRVFQDM---ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
G P +A R+ DM C P ++N++L L A +F + G P +
Sbjct: 143 GLPGQATRLLLDMWGVYC--FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTV 200
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
T+ +++K C + +A +L+++ G PN+I Y +
Sbjct: 201 YTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQML------------------- 241
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
I A + R+ EA +E+M G + D+ ++N +I+ CK G+
Sbjct: 242 ----------------IHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGR 285
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+ A L D M + F D L+ GLC+ G + AR L + + N YN
Sbjct: 286 IHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP----NPNTVLYNT 341
Query: 317 IVDRLGKDGKIDHAIN-VFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
+++ G+ + A + ++++M + D+FT++ M+ LCK L SA + L +K
Sbjct: 342 LINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKK 401
Query: 372 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
G ++DG G EA K+ + + +S
Sbjct: 402 GFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLS 439
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+++C+ + L M + G++PD+VTYNSLI G + +L+L + +
Sbjct: 587 ILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAK 646
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD +YN+L+ G ++A ++ + P T++I++N KN
Sbjct: 647 GIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQ 706
Query: 121 LRMFRG 126
+ G
Sbjct: 707 FTILMG 712
>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 418
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 145/292 (49%), Gaps = 1/292 (0%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E LE G P ++ +N LMH + G+ A VF + L P +FN ++NG K
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ +Q G P++ TY++LI GLCK ++ A + E+ D+G PN +T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A D +++M
Sbjct: 245 TTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG LE A M K+ D +T LI GLC+ G
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYS 346
A L M +G + Y I++ K G + + + M+ +D + S
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ-RDGYVPS 415
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 141/256 (55%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + + + G+ P VV++N+L+ G + L L + M G+ PDV++Y+ L++ L
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ K D+AN +F +M+ L P TF +++G CKN A+ +++ + P+L
Sbjct: 217 CKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDL 276
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+TYN LI GLCK G L+ A+ ++ E+ G P+ ITYTT++ + + LE
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKR 336
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M ++ D Y +I+ + GR +A + +M++ G++ +I +Y +IN +CK+G
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396
Query: 257 LEAAYLLLDEMEKQGF 272
+ LL EM++ G+
Sbjct: 397 VWTGSKLLKEMQRDGY 412
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 147/284 (51%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + G+ P V S+N+LM+ +LG D
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLD 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M + P T+++++NGLCK D+A +F + +G VP VT+ LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I K++ +P+ ITY T++ + K +++ M KG
Sbjct: 249 DGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A +Y ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
L EM G + + T+T++I+ CK G++ L+ M + G+
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 146/321 (45%), Gaps = 6/321 (1%)
Query: 85 ANRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
A+ VF +++ G T F+ ++ ++ + +A+ +R ++H F T +
Sbjct: 48 ASAVFAEILETKGTQTSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
++ L K + +E + G+ + + +M + + +L + A+ + G
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGL 167
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
+ T++ ++K+G L E M GVQ D+ +Y+ LIN CKE K++ A
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE 227
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
L DEM G + T T LIDG CK G + A + M +L YN ++ L
Sbjct: 228 LFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLC 287
Query: 323 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
K G + A ++ + M +K D TY++++ CK L +A + +K +R+
Sbjct: 288 KKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDV 347
Query: 379 AQKAVVDGLRHSGCRREAKKI 399
A A++ GL G +A+K+
Sbjct: 348 AYTALISGLCQEGRSVDAEKM 368
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 101/202 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ D + + M + G+ P+ VT+ +LI G +N + ++++ +ML
Sbjct: 211 VLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQ 270
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+ +YN+L++ L + G +A + +M L P T+ +++G CK + A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETA 330
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + K + V Y LI GLC+ GR A +L+E+ G P TYT I+
Sbjct: 331 LEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 181 CFRNRKYKLGLEILSAMKRKGY 202
+ G ++L M+R GY
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGY 412
>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
macrophylla]
Length = 431
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 149/285 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV+YN+L+ G R L L ML
Sbjct: 147 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 206
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN +F +M+ L P F +++G CKN D A
Sbjct: 207 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVDLA 266
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + +P+L+TYN LI GLCK G L+ ++ E+ G P+ ITYTT++
Sbjct: 267 MEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDG 326
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + E M ++ D Y +I+ + GR +A + +M+ G++ D
Sbjct: 327 CCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPD 386
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y +IN +CK+G + LL EM++ G T+ +L++G
Sbjct: 387 ARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 158/309 (51%), Gaps = 2/309 (0%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ ++ + + + D + + G+ P V SYN+
Sbjct: 123 FKLVWGFYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 182
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M+ + P T+++++NGLCK D+A +F + G
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 242
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP V + LI G CK GR+ A I K++ P+ ITY T++ + K
Sbjct: 243 LVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVH 302
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
++ M KG D Y T+I K G L A ++ +QM+ + ++LD V+Y LI+
Sbjct: 303 HLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGL 362
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 310
C+EG+ A +L EM G + D T+T++I+ CK G++ KG++L L+ M + G +
Sbjct: 363 CQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKL-LKEMQRDGHVPS 421
Query: 311 LEAYNCIVD 319
+ YN +++
Sbjct: 422 VVTYNVLMN 430
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 143/297 (48%), Gaps = 1/297 (0%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
E+LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 132 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 191
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D R+ + G P++ TY++LI GLCK ++ A + E+ G PN + +T
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFT 251
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T++ +N + L +EI M + D Y T+I K G LK+ +++M
Sbjct: 252 TLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMK 311
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G++ D ++Y TLI+ CKEG L+ A+ +M ++ D+ +T LI GLC+ G A
Sbjct: 312 GLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDA 371
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
L M +G + Y I++ K G + + + M+ +D S + +N+
Sbjct: 372 EKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ-RDGHVPSVVTYNV 427
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 129/272 (47%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y ++ + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 113 VLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 172
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ ++Y T+M R G + SAM G D + Y +I K ++ +A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 232
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ + V + TLI+ +CK G+++ A + +M Q D T+ LI GL
Sbjct: 233 ELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K ++ M+ G + Y ++D K+G +D A + M + D
Sbjct: 293 CKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDE 352
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMLREMLNVGLK 384
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 152/340 (44%), Gaps = 6/340 (1%)
Query: 66 VWSYNSLMHCLFQLGKPDEANRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
+W SL+ + A+ VF ++ G F+ ++ ++ + +A+
Sbjct: 35 LWEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIEC 94
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
+R ++H F T +++ L K + KE+ + G+ + + +M +
Sbjct: 95 YRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCK 154
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
+ ++ + A+ + G Y T++ ++++G L E M+ GVQ D+ +
Sbjct: 155 DGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYT 214
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
Y+ LIN CKE K++ A L DEM +G + T LIDG CK G + A + M
Sbjct: 215 YSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQML 274
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLP 359
+L YN ++ L K G + ++ + M +K D TY++++ CK L
Sbjct: 275 SQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLD 334
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+A + ++ +R+ + A A++ GL G +A+K+
Sbjct: 335 TAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKM 374
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 150/285 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV+YN+L+ G R L L ML
Sbjct: 147 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 206
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D AN +F +M+ L P TF +++G CKN D A
Sbjct: 207 GVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 266
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + +P+L+TYN LI GLCK G L+ A ++ E+ G P+ TYTT++
Sbjct: 267 MEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDG 326
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + E M ++ D Y +I+ + GR +A + +M++ G++ D
Sbjct: 327 CCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 386
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y ++N +CK+G + LL EM++ G T+ +L++G
Sbjct: 387 TGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 160/309 (51%), Gaps = 2/309 (0%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ ++ + + + D + + G+ P V SYN+
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 182
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M+ + P T+++++NGLCK D A +F + G
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKG 242
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP VT+ LI G CK GR+ A I K++ P+ ITY T++ + K
Sbjct: 243 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAH 302
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+++ M KG D F Y T+I K G L A ++ ++M+ + ++LD V+Y LI+
Sbjct: 303 DLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGL 362
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 310
C+EG+ A +L EM G + D T+T++++ CK G++ KG++L L+ M + G +
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKL-LKEMQRDGHAPS 421
Query: 311 LEAYNCIVD 319
+ YN +++
Sbjct: 422 VVTYNVLMN 430
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 144/298 (48%), Gaps = 1/298 (0%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E+LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ + G P++ TY++LI GLCK ++ A + E+ G PN +T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTF 250
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + D Y T+I K G LK+A D +++M
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 310
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D +Y TLI+ CKEG L+ A+ M ++ D +T LI GLC+ G
Sbjct: 311 KGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 370
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
A L M +G + Y IV+ K G + + + M+ +D S + +N+
Sbjct: 371 AEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQ-RDGHAPSVVTYNV 427
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 128/272 (47%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y + + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 172
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ ++Y T+M R G + SAM G D + Y +I K ++ A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGAN 232
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
++M+ G+ + V++ TLI+ +CK G+++ A + +M Q D T+ LI GL
Sbjct: 233 GLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K A ++ M+ G + Y ++D K+G +D A + M + D
Sbjct: 293 CKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 352
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 168/334 (50%), Gaps = 4/334 (1%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
R+ E G VT N+LI G L + ++ EMLE G+P D +YN+L+ G
Sbjct: 455 RLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEG 514
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K + R+ ++M + P T+N +L GLC D+A++++ + G + + TY
Sbjct: 515 KVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYG 574
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
I+++G CKA R+ + EL N+I Y I+K +N L++L MK K
Sbjct: 575 IMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSK 634
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G + Y ++I IG +++A +++M +G ++V Y LI YCK G+++ A
Sbjct: 635 GILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTA 694
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
EM +K+T+T++IDG CK GN++ A L M + G ++ YN + +
Sbjct: 695 ESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNG 754
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVH 350
K +D+A V + M + D TY+++VH
Sbjct: 755 FCKANDMDNAFKVCDQMATEGLPVDEITYTTLVH 788
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 191/413 (46%), Gaps = 43/413 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ + + I + M I+P VT SL+ G ++ + + + L+E+L G
Sbjct: 331 LIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSG 390
Query: 62 --IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
I PD + S++H L + + A R + M+ + P +++ GLCK+
Sbjct: 391 LSIHPD--NCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLE 448
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM- 178
A ++ L + G VT N LI GLC AG+L A I+KE+ + G + ITY ++
Sbjct: 449 ATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALIL 508
Query: 179 --------KCCFRNR--------------------------KYKLGLEILSAMKRKGYTF 204
+ CFR R K +++ K G
Sbjct: 509 GFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLIS 568
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ Y ++ + K R+++ + ++++ ++L+ + YN +I +C+ G + AA LL
Sbjct: 569 NIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLL 628
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+ M+ +G + T++ LI G+C G ++ A+ ++ M K GF N+ Y ++ K
Sbjct: 629 ENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKL 688
Query: 325 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
G++D A + + M + FTY+ M+ CK + A+ LL+ +SG+
Sbjct: 689 GQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGI 741
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 142/319 (44%), Gaps = 35/319 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C I+ M E G+ D +TYN+LI G + L +EM + G
Sbjct: 471 LIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRG 530
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK-NRYTD-- 118
I PD+++YN L+ L +GK D+A +++ + L T+ IM+ G CK NR D
Sbjct: 531 IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVE 590
Query: 119 --------------------------------NALRMFRGLQKHGFVPELVTYNILIKGL 146
AL++ ++ G +P TY+ LI G+
Sbjct: 591 NLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGV 650
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C G + A+ ++ E+ G PN + YT ++ + + M +
Sbjct: 651 CNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNK 710
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
F Y +I + K+G +++A + + +M G+ D+V+YN L N +CK ++ A+ + D+
Sbjct: 711 FTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQ 770
Query: 267 MEKQGFECDKYTHTILIDG 285
M +G D+ T+T L+ G
Sbjct: 771 MATEGLPVDEITYTTLVHG 789
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 175/394 (44%), Gaps = 35/394 (8%)
Query: 1 MLIDAY-CQF--VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 57
+LI Y QF + F + + G P + T N ++ + + ++ M
Sbjct: 153 LLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVM 212
Query: 58 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
E G PDV+S+ ++++ L + GK + A +F M ++P T+N ++NGLC+N
Sbjct: 213 SE-GACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRL 271
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
DNA + + G P L TY LI GL K IL E+ +G PN + + +
Sbjct: 272 DNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNL 331
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + + L+I M K T +++ F K +++ A + +E++++ G+
Sbjct: 332 IDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGL 391
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+ + ++++ CK+ + +A+ M + F T+L+ GLCK G
Sbjct: 392 SIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGK------ 445
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKR 357
HLE E + ++++ K+ T ++++H LC A +
Sbjct: 446 HLEAT---------ELWFRLLEKGSPASKV----------------TSNALIHGLCGAGK 480
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
LP AS+++ L+ G+ + + A++ G + G
Sbjct: 481 LPEASRIVKEMLERGLPMDRITYNALILGFCNEG 514
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 98/178 (55%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I A+CQ + A +L M+ GI P+ TY+SLI G L+ + L+DEM +
Sbjct: 610 IIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKE 669
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V Y +L+ +LG+ D A + +MI ++ P T+ +M++G CK + A
Sbjct: 670 GFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKA 729
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
+ +++ G VP++VTYN+L G CKA + A + ++ G + ITYTT++
Sbjct: 730 NNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLV 787
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 106/249 (42%), Gaps = 35/249 (14%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++ YC+ + + N + + + + YN +I +N ++ +L LL+ M
Sbjct: 575 IMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSK 634
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+ +Y+SL+H + +G ++A + +M P + ++ G CK D A
Sbjct: 635 GILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTA 694
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + P TY ++I G CK G + A +L ++ +SG P+ +TY +
Sbjct: 695 ESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTN- 753
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
G+C K + A +QM T+G+ +D
Sbjct: 754 ---------------------------GFC-------KANDMDNAFKVCDQMATEGLPVD 779
Query: 241 IVSYNTLIN 249
++Y TL++
Sbjct: 780 EITYTTLVH 788
>gi|410109871|gb|AFV61015.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
barbata]
Length = 429
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 152/285 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV+YN+L+ G R L+ L ML
Sbjct: 145 ILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLAS 204
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN +F +M+ L P TF +++G CKN D A
Sbjct: 205 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVDLA 264
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + +P+L+TYN LI GLCK G L+ A ++ E+ G + ITYTT++
Sbjct: 265 MEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLIDG 324
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + E M ++ D Y +I+ + GR +A + +M++ G++ D
Sbjct: 325 CCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 384
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y +IN +CK+G + LL +M++ G T+ +L++G
Sbjct: 385 TXTYTMIINEFCKKGDVWKGSKLLKDMQRNGHAPSVVTYNVLMNG 429
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 153/287 (53%), Gaps = 2/287 (0%)
Query: 34 YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
+N L+ ++ + + + D + + G+ P V SYN+LM+ +LG +E R+ M+
Sbjct: 143 FNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAML 202
Query: 94 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 153
+ P T+++++NGLCK D+A +F + G P VT+ LI G CK GR+
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVD 262
Query: 154 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
A I K++ P+ ITY T++ + K +++ M KG D Y T+I
Sbjct: 263 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLI 322
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
K G L A ++ ++M+ + ++LD V+Y LI+ C+EG+ A +L EM G +
Sbjct: 323 DGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 382
Query: 274 CDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVD 319
D T+T++I+ CK G++ KG++L L+ M + G ++ YN +++
Sbjct: 383 PDTXTYTMIINEFCKKGDVWKGSKL-LKDMQRNGHAPSVVTYNVLMN 428
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 130/270 (48%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
+N LMH + G A VF + L P ++N ++NG + + R+ +
Sbjct: 143 FNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAML 202
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
G P++ TY++LI GLCK ++ A + E+ G PN +T+TT++ +N +
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVD 262
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
L +EI M + D Y T+I K G LK+A D +++M G++ D ++Y TLI
Sbjct: 263 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLI 322
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
+ CKEG L+AA+ M ++ D +T LI GLC+ G A L M +G
Sbjct: 323 DGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 382
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+ Y I++ K G + + + M+
Sbjct: 383 PDTXTYTMIINEFCKKGDVWKGSKLLKDMQ 412
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 141/273 (51%), Gaps = 4/273 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
FNI+++ CK+ A +F + K G P +V+YN L+ G + G L + +
Sbjct: 143 FNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAML 202
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
SG P+ TY+ ++ + K E+ M KG +G + T+I K GR+
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVD 262
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A + +QM++ + D+++YNTLI CK+G L+ A+ L+DEM +G + DK T+T LI
Sbjct: 263 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLI 322
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK-IDHAINVFESMEV--- 339
DG CK G++ A H + M + + AY ++ L ++G+ +D + E + V
Sbjct: 323 DGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 382
Query: 340 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
D+ TY+ +++ CK + SKLL ++G
Sbjct: 383 PDTXTYTMIINEFCKKGDVWKGSKLLKDMQRNG 415
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 39/265 (14%)
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
+NIL+ CK G +R A+ + + G P+ ++Y T+M
Sbjct: 143 FNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMN------------------- 183
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
++++G L E M+ GVQ D+ +Y+ LIN CKE K++
Sbjct: 184 ----------------GYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMD 227
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A L DEM +G + T T LIDG CK G + A + M +L YN ++
Sbjct: 228 DANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLI 287
Query: 319 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
L K G + A ++ + M +K D TY++++ CK L +A + ++ +R
Sbjct: 288 YGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQENIR 347
Query: 375 ILKSAQKAVVDGLRHSGCRREAKKI 399
+ A A++ GL G +A+K+
Sbjct: 348 LDDVAYTALISGLCQEGRSVDAEKM 372
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 185/406 (45%), Gaps = 9/406 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LIDA + A + + MR+ G+ P+V TYN L+ +N+ + + +LDEM G
Sbjct: 134 LIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKG 193
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PPD +Y +++ L +L + DEA V M P A++N ++ LC+
Sbjct: 194 CPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----PPVAASYNAIVLALCREFRMQEVF 248
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P ++TY ++ CKAG LR A IL + +G PN +T+T +++
Sbjct: 249 SVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGL 308
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F + + L++ M +G+ Y +I +G LK A+ + M G ++
Sbjct: 309 FDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNV 368
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y+TLI+ + K G L A + ++M + G + + +T ++D CK A+ ++
Sbjct: 369 RTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDK 428
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M N +N ++ L ++ A+ VF M V + TY+ ++H L +
Sbjct: 429 MLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGN 488
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A ++ G+ + VV GL + REA K+
Sbjct: 489 CGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKM 534
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 179/406 (44%), Gaps = 48/406 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ A CQ A +L+ M G PD VTY ++++ + C LD LDE E+
Sbjct: 168 LLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVS-------VLCKLDRLDEATEV 220
Query: 61 --GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--------------------CGDL- 97
+PP SYN+++ L + + E V DM+ G+L
Sbjct: 221 LAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELR 280
Query: 98 --------------TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
TP TF ++ GL + +AL M+R + G+ P V+YNILI
Sbjct: 281 MACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILI 340
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
+GLC G L+ A IL + G PN TY+T++ + + I + M R G
Sbjct: 341 RGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCK 400
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
+ Y ++ F K +A +++M+ + + V++NTLI C ++ A +
Sbjct: 401 PNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGV 460
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
EM + G + T+ LI GL + GN A + M G + +L YN +V L +
Sbjct: 461 FHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQ 520
Query: 324 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
A+ M V+ ++FT+S+++H CK + A+ +L
Sbjct: 521 TRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWML 566
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 184/404 (45%), Gaps = 5/404 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ A C+ +++++ M G+ P+V+TY +++ + L + +L M+ G
Sbjct: 234 IVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITG 293
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V ++ +L+ LF G+ +A +++ M+ P T ++NI++ GLC A
Sbjct: 294 CTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGAS 353
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ +++HG P + TY+ LI G KAG L A I ++ SG PN + YT ++
Sbjct: 354 SILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVF 413
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + ++ M + + + T+I + R+ A +M G +
Sbjct: 414 CKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNG 473
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN LI+ +EG A ++ EM+ G E T+ ++ GLC+ + A + +
Sbjct: 474 RTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGK 533
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M G N ++ I+ K+G++ A + +M V ++ Y+ ++ LC +
Sbjct: 534 MIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDK 593
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGL-RHSGCRREAKKIQ 400
L A LL L G+ +V G+ R+ GC + IQ
Sbjct: 594 LVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCIEPSDFIQ 637
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 162/332 (48%), Gaps = 9/332 (2%)
Query: 34 YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
YN LI R +++ + + D M + G+ P+V++YN L+ L Q + A ++ +M
Sbjct: 131 YNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMA 190
Query: 94 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 153
P T+ +++ LCK D A + + P +YN ++ LC+ R++
Sbjct: 191 RKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQ 245
Query: 154 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
++ ++ G PN ITYTTI+ + + ++ IL+ M G T + + ++
Sbjct: 246 EVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALV 305
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
GR+ +A D MV +G VSYN LI C G L+ A +L+ ME+ G
Sbjct: 306 RGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCF 365
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
+ T++ LIDG KAG++ GA M++ G N+ Y +VD K + A ++
Sbjct: 366 PNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSL 425
Query: 334 FESMEVK----DSFTYSSMVHNLCKAKRLPSA 361
+ M ++ ++ T+++++ +LC +R+ A
Sbjct: 426 IDKMLLENCPPNTVTFNTLIRSLCDCRRVGRA 457
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 153/329 (46%), Gaps = 14/329 (4%)
Query: 54 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF----QDMICGDLTPCTATFNIMLN 109
L EM G+P + + + + G PD A + F D+ C T +N +++
Sbjct: 78 LQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPTE-PRLYNHLID 136
Query: 110 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 169
L + + ++ ++K G P + TYN+L++ LC+ R+ AR +L E+ G P
Sbjct: 137 ALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPP 196
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
+ +TY TI+ + + E+L+AM +++ ++ A + R++E +
Sbjct: 197 DDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNA-----IVLALCREFRMQEVFSVV 251
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
MV G+Q ++++Y T+++ +CK G+L A +L M G + T T L+ GL
Sbjct: 252 SDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDD 311
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TY 345
G + A +M G+ + +YN ++ L G + A ++ SME F TY
Sbjct: 312 GRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTY 371
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
S+++ KA L A + +SG +
Sbjct: 372 STLIDGFSKAGDLGGAISIWNDMSRSGCK 400
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 134/286 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C +ILN M + G P+V TY++LI G ++ L ++ + ++M
Sbjct: 338 ILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRS 397
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V Y +++ + ++A + M+ + P T TFN ++ LC R A
Sbjct: 398 GCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRA 457
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F +++HG VP TYN LI GL + G A ++ E+ G + +TY T++
Sbjct: 458 LGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSG 517
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ R + + + M +G + F + +I A+ K G ++ A + M +
Sbjct: 518 LCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRN 577
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
I+ Y L+ C + KL A L +M +G + T +L+ G+
Sbjct: 578 ILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 623
>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Glycine max]
Length = 875
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 197/447 (44%), Gaps = 57/447 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL------ 54
+LI + C+ +FD + +M + G P+ T L+ G R L+ +L+L+
Sbjct: 155 LLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNNNNSC 214
Query: 55 ----------------------------DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
+ M E+G+ PDV ++NS + L + GK EA+
Sbjct: 215 RIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEAS 274
Query: 87 RVFQDMI----CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
R+F+DM G P TFN+ML G CK+ +A + ++K G L YNI
Sbjct: 275 RIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIW 334
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
+ GL + G L AR +L E+ G PNA TY +M RN ++ M R G
Sbjct: 335 LMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGV 394
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
D Y T++ + G++ EA + +M+ +G Q + + NTL++ KEG+ A
Sbjct: 395 YPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEE 454
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
+L +M ++ ++ D T I+++GLC+ G + A + M G S L
Sbjct: 455 MLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTS-----------LD 503
Query: 323 KDGKIDHAINVFESME--VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
K IN ++ + D TY+++++ LCK RL A K + L +R
Sbjct: 504 KGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLR----PD 559
Query: 381 KAVVDGLRHSGCRREAKKIQSKIRMAK 407
D S C++ KI S R+ K
Sbjct: 560 SVTYDTFIWSFCKQ--GKISSAFRVLK 584
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 196/430 (45%), Gaps = 29/430 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D C+ +++ M G+ PD V Y++L+ G + + +L EM+
Sbjct: 368 IMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRN 427
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ ++ N+L+H L++ G+ EA + Q M P T T NI++NGLC+N D A
Sbjct: 428 GCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKA 487
Query: 121 LRMFRGLQKHGF----------------------VPELVTYNILIKGLCKAGRLRTARWI 158
+ + +G +P+ +TY LI GLCK GRL A+
Sbjct: 488 SEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKK 547
Query: 159 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 218
E+ P+++TY T + + K +L M+R G + Y +I
Sbjct: 548 FIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGS 607
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
++ E ++M G+ DI +YN +I C+ GK + A LL EM +G + +
Sbjct: 608 NNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSS 667
Query: 279 HTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE-S 336
ILI K+ + K A L +N G L Y+ + + L G++ A +FE S
Sbjct: 668 FKILIKAFSKSSDFKVACELFEVALNICGRKEAL--YSLMFNELLAGGQLSEAKELFEVS 725
Query: 337 ME---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 393
++ +F Y ++ LC+ +RL A+ LL + G ++ V+DGL G +
Sbjct: 726 LDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNK 785
Query: 394 REAKKIQSKI 403
R+A ++ ++
Sbjct: 786 RQADELAKRM 795
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 170/354 (48%), Gaps = 17/354 (4%)
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P + YN L+ + +P + ++ DM+ + P T TFN++++ LC++R D+AL
Sbjct: 111 LSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHAL 170
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + + G P T IL++GLC+AG ++ A ++ +S N + Y T++
Sbjct: 171 QLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNN-NNSCRIANRVVYNTLVSRF 229
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG----V 237
R ++ M G D + + I+A + G++ EA+ M D
Sbjct: 230 CREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLP 289
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG----FECDKYTHTILIDGLCKAGNIK 293
+ ++V++N ++ +CK G + A L++ M+K G EC + I + GL + G +
Sbjct: 290 RPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLEC----YNIWLMGLLRNGELL 345
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
ARL L+ M G + N YN ++D L ++ + A + + M D+ YS+++
Sbjct: 346 EARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLL 405
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
H C ++ A +L +++G + ++ L G EA+++ K+
Sbjct: 406 HGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKM 459
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 107/233 (45%), Gaps = 3/233 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
I ++C+ + + +L M G S + TYN+LI G N+ + L DEM E G
Sbjct: 566 FIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKG 625
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+ +YN+++ CL + GK +A + +M+ ++P ++F I++ K+ A
Sbjct: 626 ISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVAC 685
Query: 122 RMFR-GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F L G L Y+++ L G+L A+ + + D Y ++
Sbjct: 686 ELFEVALNICGRKEAL--YSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIAR 743
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
++ + +L + KGY FD + VI K G ++A + ++M+
Sbjct: 744 LCQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRMM 796
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 186/409 (45%), Gaps = 43/409 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID+ C+ +FD + +RM + G+ P+ VTY+ LI R L +L L EM++MG
Sbjct: 373 LIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMG 432
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ P V+ YNSL+ HC F G A + +MI L P T+ ++ G C +
Sbjct: 433 LKPSVYPYNSLINGHCKF--GDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
ALR++ + G VP + T+ L+ GL +AG +R A + E+ + PN +TY +++
Sbjct: 491 ALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIE 550
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
E L+ M KG D + Y +I G+ EA +++ + +L
Sbjct: 551 GYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ + Y L++ +C+EGKLE A + +M +G + D + +LIDG K + K L
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLL 670
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
+ M+ G + Y ++D K G A +++ M V + TY+
Sbjct: 671 KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYT--------- 721
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
AV++GL +G EA+ + SK+R
Sbjct: 722 --------------------------AVINGLCKAGFVNEAEILCSKMR 744
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 168/339 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ F+ G +++ M SP +SL+ G + + +L+L+ + E G
Sbjct: 303 LVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFG 362
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+++ YN+L+ L + DEA +F M L P T++I+++ C+ D AL
Sbjct: 363 VSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTAL 422
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ G P + YN LI G CK G + A ++ E+ + P +TYT++M
Sbjct: 423 SFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGY 482
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K L + M KG + + T+++ + G +++A +M V+ +
Sbjct: 483 CSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNR 542
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN +I YC+EG + A+ L+EM ++G D Y++ LI GLC G A++ ++
Sbjct: 543 VTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
++K + N Y ++ ++GK++ A++V + M ++
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLR 641
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 197/441 (44%), Gaps = 39/441 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C+F A +++ M + P VVTY SL+ G ++ +L L EM G
Sbjct: 443 LINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P ++++ +L+ LF+ G +A ++F +M ++ P T+N+M+ G C+ A
Sbjct: 503 IVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAF 562
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G VP+ +Y LI GLC G+ A+ + L N I YT ++
Sbjct: 563 EFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGF 622
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R K + L + M +G D Y +I +K K +++M G++ D
Sbjct: 623 CREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDD 682
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL---- 297
V Y ++I+ K G + A+ + D M +G ++ T+T +I+GLCKAG + A +
Sbjct: 683 VIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSK 742
Query: 298 -----------------------------HLEYMNKI--GFDSNLEAYNCIVDRLGKDGK 326
+E N I G +N YN ++ + G+
Sbjct: 743 MRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGR 802
Query: 327 IDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
++ A + M D TY++M+ LC+ + A +L S + G+R + A
Sbjct: 803 MEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNT 862
Query: 383 VVDGLRHSGCRREAKKIQSKI 403
++ G +G +A ++++++
Sbjct: 863 LIHGCCVAGEMGKATELRNEM 883
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 175/397 (44%), Gaps = 8/397 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I + C+ ++ +M G ++V YN LI G + + ++ + ++
Sbjct: 233 VIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKE 292
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +Y +L+ L ++ + + + +M+ +P A + ++ GL K + AL
Sbjct: 293 LKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEAL 352
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + + G P + YN LI LCK A + +G G PN +TY+ ++
Sbjct: 353 NLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMF 412
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R K L L M G + Y ++I K G + A M +M+ ++ +
Sbjct: 413 CRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTV 472
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y +L+ YC +GK+ A L EM +G YT T L+ GL +AG I+ A
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTE 532
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
M + N YN +++ ++G + A M V D+++Y ++H LC +
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQ 592
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
S +K+ + L G L + GL H CR
Sbjct: 593 -ASEAKVFVDGLHKGNCEL---NEICYTGLLHGFCRE 625
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 186/401 (46%), Gaps = 6/401 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ +F F + + M GI PDV Y +I LS + +++ +M G
Sbjct: 198 LLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATG 257
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
++ YN L+ L + K EA + +D+ +L P T+ ++ GLCK + + L
Sbjct: 258 CDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGL 317
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + + F P + L++GL K G++ A ++K + + G +PN Y ++
Sbjct: 318 EMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSL 377
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R + + M + G + Y +I F + G+L A ++ +M+ G++ +
Sbjct: 378 CKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSV 437
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLE 300
YN+LIN +CK G + AA L+ EM + E T+T L+ G C G I K RL+ E
Sbjct: 438 YPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVK-DSFTYSSMVHNLCKAK 356
K G ++ + ++ L + G I A+ +F M VK + TY+ M+ C+
Sbjct: 498 MTGK-GIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEG 556
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
+ A + L ++ G+ + + ++ GL +G EAK
Sbjct: 557 NMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 170/351 (48%), Gaps = 4/351 (1%)
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
M ++ + P+V + ++L+H L + A +F DMI + P + ++ LC+ +
Sbjct: 183 MTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKD 242
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
A M ++ G +V YN+LI GLCK ++ A I K+L P+ +TY T
Sbjct: 243 LSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCT 302
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ + +++++GLE++ M R ++ +++ K G+++EA + ++++ G
Sbjct: 303 LVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFG 362
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
V +I YN LI+ CK + A LL D M K G + T++ILID C+ G + A
Sbjct: 363 VSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTAL 422
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNL 352
L M +G ++ YN +++ K G I A ++ M K TY+S++
Sbjct: 423 SFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGY 482
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
C ++ A +L G+ ++ GL +G R+A K+ +++
Sbjct: 483 CSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEM 533
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 147/349 (42%), Gaps = 37/349 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ YC+ + + LN M E GI PD +Y LI G S + +D + +
Sbjct: 547 VMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKG 606
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM---------IC----------------- 94
+ Y L+H + GK +EA V QDM +C
Sbjct: 607 NCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVF 666
Query: 95 ---------GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
L P + M++ K A ++ + G VP VTY +I G
Sbjct: 667 LGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVING 726
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN-RKYKLGLEILSAMKRKGYTF 204
LCKAG + A + ++ PN +TY + + K +E+ +A+ KG
Sbjct: 727 LCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAI-LKGLLA 785
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ Y +I F + GR++EA++ + +M+ DGV D ++Y T+I+ C+ ++ A L
Sbjct: 786 NTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELW 845
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
+ M ++G D+ + LI G C AG + A M + G N E
Sbjct: 846 NSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTET 894
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 125/283 (44%), Gaps = 35/283 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ +C+ + ++ M G+ D+V Y LI G+ ++ L LL EM + G
Sbjct: 618 LLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRG 677
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA- 120
+ PD Y S++ + G EA ++ MI P T+ ++NGLCK + + A
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 121 -----LR------------------------MFRGLQKH-----GFVPELVTYNILIKGL 146
+R M + ++ H G + TYN+LI+G
Sbjct: 738 ILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGF 797
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C+ GR+ A ++ + G +P+ ITYTT++ R K +E+ ++M KG D
Sbjct: 798 CRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDR 857
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
Y T+I G + +AT+ +M+ G++ + + T I+
Sbjct: 858 VAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTIS 900
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 132/288 (45%), Gaps = 5/288 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQ-KHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
F++++ ++R + + +F+ + K +PE+ T + L+ GL K A + ++
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDM 218
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
+ G P+ YT +++ + E++ M+ G + Y +I K ++
Sbjct: 219 INVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
EA + + ++ D+V+Y TL+ CK + E ++DEM + F + + L
Sbjct: 279 WEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSL 338
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 338
++GL K G ++ A ++ + + G N+ YN ++D L K D A +F+ M
Sbjct: 339 VEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGL 398
Query: 339 VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+ TYS ++ C+ +L +A L + G++ ++++G
Sbjct: 399 CPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLING 446
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 92/197 (46%), Gaps = 5/197 (2%)
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQL-DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
+I +V+ R+ + + M+T L ++ + + L++ K A L D+M
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINV 221
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
G D Y +T +I LC+ ++ A+ + M G D N+ YN ++D L K K+ A
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 331 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+ + + + K D TY ++V LCK + +++ L+ ++A ++V+G
Sbjct: 282 VGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEG 341
Query: 387 LRHSGCRREAKKIQSKI 403
LR G EA + ++
Sbjct: 342 LRKRGKVEEALNLVKRV 358
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 151/285 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ N + + G+ P VV++N+L+ G R L L M
Sbjct: 130 ILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHAS 189
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN +F +M+ L P TF +++G CK+ D A
Sbjct: 190 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLA 249
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + P+L+TYN LI GLCK G L+ A ++ E+ G P+ ITYTT++
Sbjct: 250 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDG 309
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + + E M ++ D Y +I+ + GR +A + +M++ G++ D
Sbjct: 310 CCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPD 369
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y +IN +CK+G + LL EM++ G T+ +L++G
Sbjct: 370 TGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 146/298 (48%), Gaps = 1/298 (0%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E+LE G P ++ +N LMH + G A VF + L P +FN ++NG +
Sbjct: 114 EEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRL 173
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ + G P++ TY++LI GLCK ++ A + E+ D G PN +T+
Sbjct: 174 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTF 233
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ ++ + L +EI M + + D Y T+I K G LK+A D +++M
Sbjct: 234 TTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 293
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG LE A+ M ++ D +T LI GLC+ G
Sbjct: 294 KGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLD 353
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
A L M G + Y I++ K G + + + M+ +D S + +N+
Sbjct: 354 AEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQ-RDGHVPSVVTYNV 410
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 156/308 (50%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ + + + + + + + G+ P V S+N+
Sbjct: 106 FKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNT 165
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M + P T+++++NGLCK D+A +F + G
Sbjct: 166 LMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKG 225
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP VT+ LI G CK+GR+ A I K++ +P+ ITY T++ + K
Sbjct: 226 LVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAH 285
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+++ M KG D Y T+I K G L+ A ++ ++M+ + ++LD V+Y LI+
Sbjct: 286 DLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGL 345
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
C+EG+ A +L EM G + D T+T++I+ CK G++ L+ M + G ++
Sbjct: 346 CQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSV 405
Query: 312 EAYNCIVD 319
YN +++
Sbjct: 406 VTYNVLMN 413
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 131/272 (48%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L + K +Y + + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 96 VLEHMMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWG 155
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ +++ T+M R G + SAM G D + Y +I K ++ +A
Sbjct: 156 LRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDAN 215
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ + V++ TLI+ +CK G+++ A + +M Q D T+ LI GL
Sbjct: 216 ELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 275
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K A ++ M+ G + Y ++D K+G ++ A + M + D
Sbjct: 276 CKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDD 335
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L +G++
Sbjct: 336 VAYTALISGLCQEGRYLDAEKVLREMLSAGLK 367
>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Cucumis sativus]
Length = 1079
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 180/378 (47%), Gaps = 6/378 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ F +++ M GI DV TYN I RNS + +L +M
Sbjct: 216 LLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKM 275
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+ SYN+L++ + GK A RVF +MI +L+P T+NI++NG C N + AL
Sbjct: 276 ITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEAL 335
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ ++ + P VT L+ GL K+ + AR IL+ + + N I++T ++
Sbjct: 336 RVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGL 395
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
RN ++L M + G D + +I F K+G + +A + M ++ +G +
Sbjct: 396 CRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNN 455
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V ++TLI CK G + A M G D +T L+ LC+ G + A L +
Sbjct: 456 VIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHH 515
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
+++IG N ++CI++ G A +VF+ M FTY S++ LCK +
Sbjct: 516 ISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQN 575
Query: 358 LPSASKLL--LSCLKSGV 373
A KLL L C+ V
Sbjct: 576 FWEARKLLKKLHCIPLAV 593
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 167/351 (47%), Gaps = 8/351 (2%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
S + ++ LI R ++ +++ ML G P V++ N +M + + +
Sbjct: 102 SSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWS 161
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
F+ M+ + P ++FNI+++ LC A+ + ++++G+VP +V+YN L+ C
Sbjct: 162 FFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCC 221
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K GR + A ++ + G + TY + RN + G +L M+ K T +
Sbjct: 222 KKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEV 281
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y T+I FVK G++ AT +M+ + ++++YN LIN YC G E A +LD M
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVM 341
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY--MNKIGFDSNLEAYNCIVDRLGKDG 325
E ++ T L++GL K+ AR LE +N+ N ++ ++D L ++G
Sbjct: 342 EANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSL--NCISHTVMIDGLCRNG 399
Query: 326 KIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
+D A + M D T+S +++ CK + A +++ + G
Sbjct: 400 LLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREG 450
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 181/396 (45%), Gaps = 5/396 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ D + +L M + G+ PD++T++ LI G + ++ + +++ ++
Sbjct: 390 VMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYRE 449
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ +++L++ ++G EA + + M T N ++ LC+N A
Sbjct: 450 GFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEA 509
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G VP VT++ +I G G A + + GH P+ TY +++K
Sbjct: 510 EEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKV 569
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + ++L + D Y T+I K G L EA E+M+ + + D
Sbjct: 570 LCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPD 629
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDE-MEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+Y +++ +EG+L A++ L M+K+ + +T IDGL KAG K A
Sbjct: 630 SYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLF 689
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKA 355
+ M + G +L A N I D + GK+ A ++ K+ T++ ++H +
Sbjct: 690 KEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRG 749
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ + S KL +SG + +++ GL + G
Sbjct: 750 QDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHG 785
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 171/407 (42%), Gaps = 45/407 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI Y + + M G P V T N ++A +N +ML
Sbjct: 110 LLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTS 169
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P+V S+N L+ L GK +A + M P ++N +L+ CK A
Sbjct: 170 RVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFA 229
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + ++ G ++ TYN+ I LC+ R +LK++ + PN ++Y T++
Sbjct: 230 LVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLING 289
Query: 181 CFRNRKYKLGLEILSAMKRKG-------YTFDGFGYC----------------------- 210
+ K + + + M Y GYC
Sbjct: 290 FVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPN 349
Query: 211 -----TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
T++ K + A + +E+ + L+ +S+ +I+ C+ G L+ A+ LL
Sbjct: 350 EVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLI 409
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI---GFDSNLEAYNCIVDRLG 322
EM K G D T ++LI+G CK GNI A+ E M+KI GF N ++ ++
Sbjct: 410 EMCKDGVHPDIITFSVLINGFCKVGNINKAK---EVMSKIYREGFVPNNVIFSTLIYNSC 466
Query: 323 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
K G + A+ + +M + D+FT +S+V +LC+ +L A + L
Sbjct: 467 KVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFL 513
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 177/401 (44%), Gaps = 40/401 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC +F+ +L+ M + P+ VT +L+ G +++ + ++L+
Sbjct: 320 ILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCIN 379
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ S+ ++ L + G DEA ++ +M + P TF++++NG CK + A
Sbjct: 380 RTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKA 439
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + GFVP V ++ LI CK G + A
Sbjct: 440 KEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEA------------------------- 474
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ +AM G D F +++A+ + G+L EA +++ + G+ +
Sbjct: 475 ----------MKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPN 524
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+++ +IN Y G A+ + D M G +T+ L+ LCK N AR L+
Sbjct: 525 SVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLK 584
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
++ I + +YN ++ + K G + A+ +FE M + DS+TY+ ++ L +
Sbjct: 585 KLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREG 644
Query: 357 RLPSASKLLLSCLKSGVRILKS-AQKAVVDGLRHSGCRREA 396
RL A L ++ + L S +DGL +G + A
Sbjct: 645 RLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAA 685
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 175/406 (43%), Gaps = 46/406 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ +F +L ++ ++ D ++YN+LI +++ L ++ L +EM++
Sbjct: 566 LLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNN 625
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEA----NRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
I PD ++Y ++ L + G+ A R+ Q I LT + + ++GL K +
Sbjct: 626 ILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEI---LTLNSIVYTCFIDGLFKAGQS 682
Query: 118 DNALRMFRGLQKHGF-----------------------------------VPELVTYNIL 142
AL +F+ +++ G +P L T+NIL
Sbjct: 683 KAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNIL 742
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
+ G + + + + + SG PN +TY +++ + +LG+++L +
Sbjct: 743 LHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESS 802
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
T D + +I +I L + D M V LD + + ++ + + ++
Sbjct: 803 TIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFV 862
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
+ EM K+GF + ++ +C+ G+I+GA + M +G + A +V L
Sbjct: 863 FMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLA 922
Query: 323 KDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKL 364
GKI+ A+ + + M ++ + T+++++H CK A L
Sbjct: 923 LCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNL 968
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/321 (19%), Positives = 134/321 (41%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ D Y + + +++++ R + P++ T+N L+ G +R + L + M G
Sbjct: 707 ITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSG 766
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y+SL+ L G + ++ + I T TFN+++ C+ D +
Sbjct: 767 FFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVI 826
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++ + T + L + + + E+ G P + Y T+MK
Sbjct: 827 DLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRM 886
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + ++ M G + D C ++ G+++EA +++M+
Sbjct: 887 CRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTT 946
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++ TL++++CK+ + A+ L ME + D + +LI C G++ A E
Sbjct: 947 STFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEE 1006
Query: 302 MNKIGFDSNLEAYNCIVDRLG 322
+ + G N+ Y +V +
Sbjct: 1007 IKQKGLLPNMTTYRVLVSAIS 1027
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 134/309 (43%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ Y + + + + N MR +G P+ +TY+SLI G + +L + +L +
Sbjct: 741 ILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAE 800
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
D ++N L+ ++ D+ + +M ++ T + + L + + N
Sbjct: 801 SSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNY 860
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ K GF+P Y ++K +C+ G ++ A + ++ G + + +++
Sbjct: 861 FVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRG 920
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K + + IL M R + T++ F K KEA + M V+LD
Sbjct: 921 LALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLD 980
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+YN LI+ C G + A +E++++G + T+ +L+ + + + L+
Sbjct: 981 IVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLK 1040
Query: 301 YMNKIGFDS 309
+N G S
Sbjct: 1041 DLNDRGLVS 1049
>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
Length = 1161
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 205/442 (46%), Gaps = 39/442 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ + +L RMR+ ++PD TYN+LI G R ++ + + + ML
Sbjct: 300 IMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQ 359
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P V +Y +++ + + D+A + +M + P T++ +LNG CK A
Sbjct: 360 NLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPA 419
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + L+ G ILI G C+ G + A+ ILK + + G P+ ITY+ ++
Sbjct: 420 IYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALING 479
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD------------- 227
R K EILS M++ G + Y T+I + K G +KEA
Sbjct: 480 MCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVAN 539
Query: 228 -----------YMEQMVTDG-----------VQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y E M+T+ + D VS+N +I+ YC G + A+ + D
Sbjct: 540 PVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYD 599
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+M + G+ + T+ L+ GLC+ G++ AR + + I F + + +N ++ + + G
Sbjct: 600 DMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYG 659
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+D A+++ E M + D TY+ ++ C+ ++ A +L L+ GV A
Sbjct: 660 TLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYT 719
Query: 382 AVVDGLRHSGCRREAKKIQSKI 403
+++GL + G + A + +I
Sbjct: 720 CLLNGLINEGQVKAASYVFHEI 741
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 176/369 (47%), Gaps = 5/369 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-E 59
+L+ +C+ IL M E G+ PD V Y L+ G + + + E++ +
Sbjct: 685 ILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICK 744
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G+ D +YNSLM+ + + R+ DM ++ P +A++NI+++G K
Sbjct: 745 EGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSK 804
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+L +++ + + G P+ VTY +LI GL + G + A L+++ G P+ + + ++
Sbjct: 805 SLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILIT 864
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
K L++ + MK + + +I ++ G L + + +M+ G+Q
Sbjct: 865 AFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQP 924
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ Y L+N C+ G+++ A+ L +EM+ G + + +I GLC+ G ++ A +
Sbjct: 925 NHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVF 984
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKA 355
M + G + + ++ L K+ KI A+++ ME+ D +Y+ ++ LCK
Sbjct: 985 SSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKD 1044
Query: 356 KRLPSASKL 364
K + A L
Sbjct: 1045 KHISDALDL 1053
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 176/369 (47%), Gaps = 7/369 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C++ + D + +M + PD+ TY L++G R + +L +L MLE G
Sbjct: 651 LLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKG 710
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC--GDLTPCTATFNIMLNGLCKNRYTDN 119
+ PD +Y L++ L G+ A+ VF ++IC G C A +N ++NG K+R +
Sbjct: 711 VVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIA-YNSLMNGYLKSRNVNT 769
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
RM + ++ P +YNIL+ G K G+ + ++ K + G P+ +TY ++
Sbjct: 770 IKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLIL 829
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ ++ L M +G D + +I AF + ++ A M +
Sbjct: 830 GLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSP 889
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+++ +IN ++G L+ ++ +L EM + G + + + L++ C+ G I A
Sbjct: 890 SSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLK 949
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKA 355
E M IG A + I+ L + GK++ A+ VF SM V T+++++H+LCK
Sbjct: 950 EEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKE 1009
Query: 356 KRLPSASKL 364
++ A L
Sbjct: 1010 SKIADALHL 1018
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 192/432 (44%), Gaps = 44/432 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID+YC + +++ + M G SP+V TY +L+ G + L + + +L++
Sbjct: 581 IIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIP 640
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
D ++N+L+ + + G DEA + + MI + P T+ I+L+G C+ AL
Sbjct: 641 FAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPAL 700
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL-------GD--------SG 166
+ + + + G VP+ V Y L+ GL G+++ A ++ E+ D +G
Sbjct: 701 VILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNG 760
Query: 167 HA---------------------PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
+ PN+ +Y +M + ++ L + M RKG D
Sbjct: 761 YLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPD 820
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y +I + G + A ++E+MV +G+ D + ++ LI + ++ K+ A + +
Sbjct: 821 NVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFN 880
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M+ T + +I+GL + G + + L M ++G N Y +V+ + G
Sbjct: 881 CMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVG 940
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
+ID A + E M+ V SS++ LC+ +L A + S ++SG+
Sbjct: 941 EIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGM----VPTV 996
Query: 382 AVVDGLRHSGCR 393
A L HS C+
Sbjct: 997 ATFTTLMHSLCK 1008
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 179/410 (43%), Gaps = 40/410 (9%)
Query: 31 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 90
V T N L+ N + D+L +M I V +YN+++H + G+ A V +
Sbjct: 226 VTTCNILLNSLCTNGEFRKAEDMLQKMKSCHISNSV-TYNTILHWYVKKGRFKAALCVLE 284
Query: 91 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 150
DM + T+NIM++ LC+ + + A + + ++K P+ TYN LI G + G
Sbjct: 285 DMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREG 344
Query: 151 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY-----TFD 205
++ AR++ + P+ TYTT++ RNR+ L ILS M+ G T+
Sbjct: 345 KINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYS 404
Query: 206 GF--GYCTV----------------------------IAAFVKIGRLKEATDYMEQMVTD 235
GYC V I F ++G + +A ++ M D
Sbjct: 405 ALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFED 464
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G+ D+++Y+ LIN C+ K+ +L M+K G + +T LI CKAG +K A
Sbjct: 465 GIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEA 524
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI---DHAINVFESMEVK-DSFTYSSMVHN 351
H + + G +N +N ++ ++G I +H M + DS +++ ++ +
Sbjct: 525 LKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDS 584
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
C + A + ++ G + ++ GL G +A++ S
Sbjct: 585 YCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMS 634
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 142/307 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ Y + F + M GI PD VTY LI G + L+ ++ L++M+
Sbjct: 791 ILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLE 850
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD ++ L+ + K A +VF M ++P + TF+ M+NGL + Y D++
Sbjct: 851 GIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHS 910
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + + G P Y L+ C+ G + A + +E+ G P + ++I++
Sbjct: 911 HKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRG 970
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R K + + + S+M R G + T++ + K ++ +A M +++D
Sbjct: 971 LCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVD 1030
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+VSYN LI CK+ + A L EM+ +G + T+ L + G ++ LE
Sbjct: 1031 VVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLE 1090
Query: 301 YMNKIGF 307
+ + G
Sbjct: 1091 DIEERGL 1097
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 147/337 (43%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ Y + + + +++ M + + P+ +YN L+ G + S SL L M+ G
Sbjct: 757 LMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKG 816
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD +Y L+ L + G D A + + M+ + P F+I++ + NAL
Sbjct: 817 IRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNAL 876
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F ++ P T++ +I GL + G L + +L E+ G PN Y ++
Sbjct: 877 QVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAK 936
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + + MK G ++I + G+L+EA M+ G+ +
Sbjct: 937 CRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTV 996
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++ TL++ CKE K+ A L ME D ++ +LI GLCK +I A
Sbjct: 997 ATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGE 1056
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
M G N+ Y + + G++ + + E +E
Sbjct: 1057 MKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIE 1093
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 114/496 (22%), Positives = 199/496 (40%), Gaps = 110/496 (22%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID +CQ IL M E GI PDV+TY++LI G R + + + ++L M +
Sbjct: 440 ILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKS 499
Query: 61 GIPP--------------------------DVWS---------YNSLMHCLFQLGKPDEA 85
GI P D++ +N+L+H ++ G EA
Sbjct: 500 GILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEA 559
Query: 86 -------------------NR----------------VFQDMICGDLTPCTATFNIMLNG 110
NR V+ DM+ +P T+ +L G
Sbjct: 560 EHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRG 619
Query: 111 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
LC+ + A + L F + T+N L+ G+C+ G L A + +++ + P+
Sbjct: 620 LCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPD 679
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT---- 226
TYT ++ R K L IL M KG D Y ++ + G++K A+
Sbjct: 680 IHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFH 739
Query: 227 ----------------------------DYMEQMVTDGVQLDI----VSYNTLINLYCKE 254
+ +++M++D Q ++ SYN L++ Y K
Sbjct: 740 EIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKR 799
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
G+ + L M ++G D T+ +LI GL + G I A LE M G + +
Sbjct: 800 GQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVF 859
Query: 315 NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
+ ++ + K+ +A+ VF M+ S T+S+M++ L + L + K+L L+
Sbjct: 860 DILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQ 919
Query: 371 SGVRILKSAQKAVVDG 386
G++ + A+V+
Sbjct: 920 VGLQPNHTHYIALVNA 935
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 140/308 (45%), Gaps = 5/308 (1%)
Query: 105 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 164
N +LN L + + + R F + T NIL+ LC G R A +L+++
Sbjct: 195 NTILNALVEEGESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKM-K 253
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
S H N++TY TI+ + ++K L +L M+R D + Y +I +I R
Sbjct: 254 SCHISNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTR 313
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A +++M D + D +YNTLIN + +EGK+ A + + M +Q T+T +ID
Sbjct: 314 AFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMID 373
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT 344
G C+ I A L M G + Y+ +++ K + AI + E ++ +
Sbjct: 374 GYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITI 433
Query: 345 YSSM----VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 400
+M + C+ + A ++L S + G+ A+++G+ E K+I
Sbjct: 434 NKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEIL 493
Query: 401 SKIRMAKI 408
S+++ + I
Sbjct: 494 SRMQKSGI 501
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 127/265 (47%), Gaps = 6/265 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI A+ + + N M+ +SP T++++I G R L S +L EML++
Sbjct: 861 ILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQV 920
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ Y +L++ ++G+ D A R+ ++M + P + ++ GLC+ + A
Sbjct: 921 GLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEA 980
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +F + + G VP + T+ L+ LCK ++ A + + + + ++Y ++
Sbjct: 981 VIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITG 1040
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+++ L++ MK KG + Y T+ A GR++ + +E + G+
Sbjct: 1041 LCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGL--- 1097
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLD 265
I +Y NL E ++E A + L+
Sbjct: 1098 IPAYKQPENL---ERRMEDAIIRLN 1119
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 8/214 (3%)
Query: 193 ILSAMKRKGYTFDGFGYCT---VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
I +++ R FD + ++ A+VK ++ +A + M G + VS NT++N
Sbjct: 140 IFTSLLRTISRFDPTNHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILN 199
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
+EG+ + +L L E + F T IL++ LC G + A L+ M S
Sbjct: 200 ALVEEGESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHI-S 258
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
N YN I+ K G+ A+ V E ME D +TY+ M+ LC+ KR A LL
Sbjct: 259 NSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLL 318
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
K + + +++G G A+ +
Sbjct: 319 KRMRKDDLTPDECTYNTLINGFFREGKINHARYV 352
>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
Length = 792
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 191/396 (48%), Gaps = 7/396 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
ML+ YC + + + G++P VTY LI G + + L +M+E
Sbjct: 296 MLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQ 355
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P + +N ++ L + + +A + + ++ P T+ +++ LCK++ A
Sbjct: 356 GLLPSTYEFNLVIKGLLRDKRWKDAIGLLK-LVVDTGVPDVFTYGCLIHWLCKHQKLHEA 414
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++ +++ G P +VTY+ L+ G C+ GR+ A + E+ D G PN +TYTT+MK
Sbjct: 415 VNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKG 474
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + +L+ M++ G + + Y +I + R+ E + +++ +++G
Sbjct: 475 YIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPT 534
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++YN++IN + K G + +A+ + +M K+G + T+T IDG C+ A L
Sbjct: 535 TMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLI 594
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKA 355
Y+ + G ++ AYN +D K G + A++ F + +KD T Y+S V
Sbjct: 595 YVRRDGIQPDIAAYNAFIDTFCKQGNMSRALH-FLVLLLKDGLTPDVTVYNSFVTGYKNL 653
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
K + ASK S +K V ++DG G
Sbjct: 654 KMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVG 689
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 170/388 (43%), Gaps = 49/388 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + ++M+EAG+ P +VTY+SL+ G + +L L EM + G
Sbjct: 401 LIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKG 460
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-----ICGDLTPCTATFNIMLNGLCKNRY 116
PP+ +Y +LM + D A + +M CGD T +NI++NGL
Sbjct: 461 FPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYT-----YNILINGLYMVNR 515
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
M + GFVP +TYN +I G KAG + +A + +++ G PN +TYT+
Sbjct: 516 VCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTS 575
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
+ R L +++L ++R G D Y I F K G + A ++ ++ DG
Sbjct: 576 FIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDG 635
Query: 237 VQLDIVSYN-----------------------------------TLINLYCKEGKLEAAY 261
+ D+ YN TLI+ + K G + A
Sbjct: 636 LTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFAL 695
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
L EM D T T L GLC++G+I GA+ L+ M ++ N+ YN +++
Sbjct: 696 ELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINAC 755
Query: 322 GKDGKIDHAINVFESM----EVKDSFTY 345
+DGK+ A + + M V D TY
Sbjct: 756 VRDGKLQEAFQLHDEMLSSGVVPDDTTY 783
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 180/404 (44%), Gaps = 35/404 (8%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-EMG 61
I C+ D +L +MREAG P +TY+S++ + + +L L D+ML G
Sbjct: 227 ISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATG 286
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
DV LMH G+ +A +F +++ +TP T+ +++ G TD
Sbjct: 287 KKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETY 346
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ R + + G +P +N++IKGL + R + A +LK + D+G P+ TY ++
Sbjct: 347 KLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTG-VPDVFTYGCLIHWL 405
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+++K + + MK G Y +++ + + GR+ EA +M G +
Sbjct: 406 CKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNE 465
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y TL+ Y K+ + AY LL+EM + G C YT+ ILI+GL Y
Sbjct: 466 VTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGL--------------Y 511
Query: 302 M-NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPS 360
M N++ C VD + K V + TY+S+++ KA + S
Sbjct: 512 MVNRV----------CEVDEMLK--------RFLSEGFVPTTMTYNSIINGFVKAGMMGS 553
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
A + K G+ + +DG + C A K+ +R
Sbjct: 554 AFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVR 597
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 174/444 (39%), Gaps = 76/444 (17%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
T+ + MR G D Y+ +I R + ++ L DEM G+ PD Y + L
Sbjct: 171 TLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGL 230
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR-------------- 122
+L D A +V M P T++ +++ L K R D ALR
Sbjct: 231 CKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMD 290
Query: 123 ----------------------MFRGLQKHGFVPELVTYNILIKG------------LCK 148
+F + G P VTY +LIKG LC+
Sbjct: 291 VVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCR 350
Query: 149 A------------------GRLRTARW-----ILKELGDSGHAPNAITYTTIMKCCFRNR 185
G LR RW +LK + D+G P+ TY ++ +++
Sbjct: 351 QMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTG-VPDVFTYGCLIHWLCKHQ 409
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
K + + MK G Y +++ + + GR+ EA +M G + V+Y
Sbjct: 410 KLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYT 469
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
TL+ Y K+ + AY LL+EM + G C YT+ ILI+GL + L+
Sbjct: 470 TLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSE 529
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSA 361
GF YN I++ K G + A ++ M K + TY+S + C+ A
Sbjct: 530 GFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLA 589
Query: 362 SKLLLSCLKSGVRILKSAQKAVVD 385
KLL+ + G++ +A A +D
Sbjct: 590 VKLLIYVRRDGIQPDIAAYNAFID 613
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 135/317 (42%), Gaps = 37/317 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD-LLDEMLEM 60
L+ Y + +FD Y +LN MR+ G+S TYN LI G + + C +D +L L
Sbjct: 471 LMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRV-CEVDEMLKRFLSE 529
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +YNS+++ + G A +++ M +TP T+ ++G C+ D A
Sbjct: 530 GFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLA 589
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ +++ G P++ YN I CK G + A L L G P+ Y + +
Sbjct: 590 VKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTG 649
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + +M ++ D Y T+I F K+G + A + +M+ + V D
Sbjct: 650 YKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPD 709
Query: 241 -----------------------------------IVSYNTLINLYCKEGKLEAAYLLLD 265
IV+YN LIN ++GKL+ A+ L D
Sbjct: 710 DKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHD 769
Query: 266 EMEKQGFECDKYTHTIL 282
EM G D T+ IL
Sbjct: 770 EMLSSGVVPDDTTYDIL 786
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 185/378 (48%), Gaps = 5/378 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ F+ + L++M E G +PD+ Y ++I G ++ + D+L M G
Sbjct: 254 LIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYG 313
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V YN+++ L + +EA + +M D TFNI+++ C+N D +
Sbjct: 314 LKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVI 373
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +HG +P+++TY +I G CK G + A +LK + G PN I+YT ++K
Sbjct: 374 ELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGL 433
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R ++ E++S M ++G + + T+I K G +++A + ++QM+ +G D+
Sbjct: 434 CRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDL 493
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+SY+T+I+ K GK E A LL+ M +G + ++ + L + G +
Sbjct: 494 ISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDS 553
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ S+ YN ++ L K + D AI+ F M + + TY+ ++ L
Sbjct: 554 IQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGL 613
Query: 358 LPSASKLLLS-CLKSGVR 374
+ A LL C + VR
Sbjct: 614 VREAQDLLSELCSRRAVR 631
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 185/377 (49%), Gaps = 4/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++A C+ F + L + G + D N +++ + ++LL ++
Sbjct: 148 VILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSF 207
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ SYN+++ L + D+ + +M+ P ATFN ++ LC+N +
Sbjct: 208 GCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQV 267
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +HG P+L Y +I G+CK G A IL + G PN + Y T++K
Sbjct: 268 HEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKG 327
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+++ ++L+ M ++ D + ++ F + G + + +EQM+ G D
Sbjct: 328 LCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPD 387
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++Y T+IN +CKEG ++ A +LL M G + + ++TI++ GLC+A A+ +
Sbjct: 388 VITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELIS 447
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
+M + G N +N +++ + K G ++ AI + + M V D +YS+++ L KA
Sbjct: 448 HMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 507
Query: 357 RLPSASKLLLSCLKSGV 373
+ A +LL + G+
Sbjct: 508 KTEEALELLNVMINKGI 524
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 167/350 (47%), Gaps = 4/350 (1%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
+ P+ TY ++ L++ +L +LDEM G + ++ + G A
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
R Q + T + N++++ +C+ D + + R L G P++V+YN ++KGL
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C A R ++ E+ G PN T+ T++ RN ++ E LS M G T D
Sbjct: 224 CMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDL 283
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T+I K G + A D + +M + G++ ++V YNT++ C + E A LL E
Sbjct: 284 RMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAE 343
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M ++ D T IL+D C+ G + LE M + G ++ Y +++ K+G
Sbjct: 344 MFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGL 403
Query: 327 IDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
+D A+ + ++M ++ +Y+ ++ LC+A+R A +L+ ++ G
Sbjct: 404 VDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQG 453
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 129/267 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D +CQ D +L +M E G PDV+TY ++I G + L+ ++ LL M
Sbjct: 358 ILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSAC 417
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ SY ++ L + + +A + MI P TFN ++N +CK + A
Sbjct: 418 GCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQA 477
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + + +G P+L++Y+ +I GL KAG+ A +L + + G PN I Y+++
Sbjct: 478 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASA 537
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + +++ +++ D Y VI++ K A D+ MV++G +
Sbjct: 538 LSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPN 597
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEM 267
+Y LI EG + A LL E+
Sbjct: 598 ESTYTILIRGLASEGLVREAQDLLSEL 624
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 128/300 (42%), Gaps = 10/300 (3%)
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
++L+ L G+ +A R GD A +N M+ G C+ A R+ +
Sbjct: 48 SALIRSLCAAGRTADAARALDTA--GDAAGVVA-YNAMIAGYCRAGQVAAARRLAAAVP- 103
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
P TY +++ LC G + A +L E+ G A I++ R ++
Sbjct: 104 --VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+ L + KG T D V++A + G + E + + ++ + G + DIVSYN ++
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
C + + L+ EM + G + T LI LC+ G + L M + G
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTP 281
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 365
+L Y I+D + KDG + A ++ M + Y++++ LC A+R A LL
Sbjct: 282 DLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLL 341
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 192/391 (49%), Gaps = 16/391 (4%)
Query: 34 YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
+NSLI L S+ + M E+G+ P V ++NSL+ + + G+ A ++F +M+
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227
Query: 94 -CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
+TP T TFNI++ G C N D F+ + + P++VTYN L+ GLC+AG++
Sbjct: 228 DTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKV 287
Query: 153 RTARWILKEL--GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
+ A ++K + +PN +TYTT+++ + L +L+ M +G + Y
Sbjct: 288 KIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYN 347
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQL-DIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
T+I + +L + + +E MV DG + D + NTLI +C GKLE A+ + ++M +
Sbjct: 348 TLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSE 407
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLE-------YMNKIGFDSNLEAYNCIVDRLG 322
+ D T+++L+ LC+ G+ + A + ++ +G + AYN + + L
Sbjct: 408 LRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLC 467
Query: 323 KDGKIDHAINVFESME---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
+GK A VF + +D +Y +++ C+ + LL+ L+
Sbjct: 468 SNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAET 527
Query: 380 QKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
++DGL G A K S +M K SH
Sbjct: 528 YGLMIDGLLKKGDPVLAHK--SLEKMLKSSH 556
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 189/407 (46%), Gaps = 23/407 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C D G+ M PDVVTYN+L+ G R + + +++ M++
Sbjct: 241 ILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKK 300
Query: 61 G--IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
+ P+V +Y +L+ +C+ Q EA + +M+ L P T+N ++ GLC+ +
Sbjct: 301 SPNLSPNVVTYTTLIRGYCMKQ--DMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQK 358
Query: 117 TDNALRMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D + G+ GF+P+ T N LIK C G+L A + +++ + P++ TY+
Sbjct: 359 LDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYS 418
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI-------GRLKEATDY 228
+++ + ++ E + K G ++AA+ + G+ K+A
Sbjct: 419 VLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERV 478
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
Q++ G Q D SY TLI +C+EG EA + LL M ++ F D T+ ++IDGL K
Sbjct: 479 FRQLMKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLK 537
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-------- 340
G+ A LE M K ++ I+ L + G + ++ + M +
Sbjct: 538 KGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDL 597
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ T +V LC++++L A K+LL L+ + V+ GL
Sbjct: 598 STHTMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGL 644
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 126/302 (41%), Gaps = 44/302 (14%)
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
+L P + + L L R AL FR ++ GF +Y ++I+ L ++ L
Sbjct: 87 AELAPSLSKTTV-LQTLQLIRTPAKALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNA 145
Query: 155 AR-WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
AR ++ SG A KLG +++ R +G+
Sbjct: 146 ARNFVFSIEKKSGGA------------------VKLGDRFFNSLIR------SYGWA--- 178
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGF 272
G +E+ + M GV +V++N+L+++ K G+ A L DEM + G
Sbjct: 179 ------GLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGV 232
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
D YT ILI G C + + M++ D ++ YN +VD L + GK+ A N
Sbjct: 233 TPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHN 292
Query: 333 VFESMEVKDS-------FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 385
V + M VK S TY++++ C + + A LL + G++ K ++
Sbjct: 293 VVKGM-VKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQ 351
Query: 386 GL 387
GL
Sbjct: 352 GL 353
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 174/356 (48%), Gaps = 2/356 (0%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
++++ + PD VTYN+LI +++ +L L E + G D Y++++H Q G+
Sbjct: 363 VQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGR 422
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
DEA + DM P T+ +++G C+ D A +M + + KHG P V+Y
Sbjct: 423 MDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTA 482
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
L+ GLC +G+ AR ++ + PNAITY +M R K ++ M KG
Sbjct: 483 LLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKG 542
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ +I + + ++ EA Y+E+ + G +++V++ T+I+ +C+ G +EAA
Sbjct: 543 FFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAAL 602
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+L++M D T+T L D L K G + A + M G D + ++ R
Sbjct: 603 SVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRY 662
Query: 322 GKDGKIDHAINVFESMEVKDSF--TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
+ G++D +N+ + M + F Y+ ++ LC L A KLL L++ ++
Sbjct: 663 CQWGRVDDMLNLLDRMVKRKPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKL 718
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 175/363 (48%), Gaps = 5/363 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L M GI + ++ +R L +L +L M + G+ P++ N+ ++ L
Sbjct: 218 VLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLV 277
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ K ++A R + M + P T+N ++ G C ++AL + GL G P+ V
Sbjct: 278 KGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKV 337
Query: 138 TYNILIKGLCKAGRLRTARWILKEL-GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+Y ++ LCK ++ + +++++ DS P+ +TY T++ ++ L L
Sbjct: 338 SYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKE 397
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
+ KG+ D GY ++ +F + GR+ EA + M + D+V+Y +++ +C+ G+
Sbjct: 398 AEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGR 457
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
++ A +L +M K G + + ++T L++GLC +G AR + + + N Y
Sbjct: 458 IDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGV 517
Query: 317 IVDRLGKDGKIDHAINVFESMEVKDSFTYSS----MVHNLCKAKRLPSASKLLLSCLKSG 372
++ ++GK+ A ++ M K F ++ +LC+ +++ A K L CL G
Sbjct: 518 VMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKG 577
Query: 373 VRI 375
I
Sbjct: 578 CAI 580
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 154/317 (48%), Gaps = 4/317 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ ++CQ D +++ M +PDVVTY +++ G R + + +L +M + G
Sbjct: 413 IVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHG 472
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ SY +L++ L GK EA + TP T+ ++++G + A
Sbjct: 473 CKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEAC 532
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ R + + GF P V N+LI+ LC+ ++ A+ L+E + G A N + +TT++
Sbjct: 533 DLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGF 592
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + L +L M D Y + A K GRL EA + + +M++ G+
Sbjct: 593 CQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTP 652
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++ ++I+ YC+ G+++ LLD M K+ Y H +I+ LC GN++ A L
Sbjct: 653 VTFRSVIHRYCQWGRVDDMLNLLDRMVKRKPFRTIYNH--VIEKLCDFGNLEEAEKLLGK 710
Query: 302 MNKIGFDSNLEAYNCIV 318
+ + S L+A C V
Sbjct: 711 VLRTA--SKLDANTCHV 725
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 162/363 (44%), Gaps = 14/363 (3%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D L + G D V Y++++ + + + L+ +M PDV +Y ++
Sbjct: 389 DDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAI 448
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ +LG+ DEA ++ Q M P T ++ +LNGLC + + A M ++H +
Sbjct: 449 VDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWW 508
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P +TY +++ G + G+L A + +E+ + G P + +++ +N+K +
Sbjct: 509 TPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKK 568
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
L KG + + TVI F +IG ++ A +E M D V+Y L +
Sbjct: 569 YLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALG 628
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K+G+L+ A L+ +M +G + T +I C+ G + L+ M K +
Sbjct: 629 KKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKRKPFRTI- 687
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
YN ++++L G ++ A E + K T S + N C L+ SCLK G
Sbjct: 688 -YNHVIEKLCDFGNLEEA----EKLLGKVLRTASKLDANTCHV--------LMESCLKKG 734
Query: 373 VRI 375
V +
Sbjct: 735 VAL 737
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 140/302 (46%), Gaps = 5/302 (1%)
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
+ +L+ L K + A R+ R + + G + ++ +AG+LR A +L +
Sbjct: 198 VYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLM 257
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
+G PN T + + K + L L M+ G D Y ++I + + R+
Sbjct: 258 QKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRI 317
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDKYTHTI 281
++A + + + + G D VSY T++ CKE K+E L+++M + D+ T+
Sbjct: 318 EDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNT 377
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESM 337
LI L K G+ A L+ GF + Y+ IV + G++D A I+++
Sbjct: 378 LIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRS 437
Query: 338 EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
D TY+++V C+ R+ A K+L K G + + A+++GL HSG EA+
Sbjct: 438 CNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAR 497
Query: 398 KI 399
++
Sbjct: 498 EM 499
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 109/275 (39%), Gaps = 44/275 (16%)
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
H P + Y T++ + + + +L M R+G + V+ ++ + G+L+ A
Sbjct: 193 SHHP--LVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNA 250
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ M GV+ ++ NT I + K KLE A L+ M+ G + D T+ LI G
Sbjct: 251 LRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKG 310
Query: 286 LCKAGNIKGARLHL--------------EYMNKIGF-------------------DSNL- 311
C I+ A L L Y +GF DSNL
Sbjct: 311 YCDLNRIEDA-LELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLI 369
Query: 312 ---EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
YN ++ L K G D A+ + E K D YS++VH+ C+ R+ A L
Sbjct: 370 PDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSL 429
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
++ A+VDG G EAKK+
Sbjct: 430 VIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKM 464
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 2/238 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + CQ L G + +VV + ++I G + + +L +L++M
Sbjct: 552 LLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLS 611
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PD +Y +L L + G+ DEA + M+ L P TF +++ C+ D+
Sbjct: 612 NKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDM 671
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + K P YN +I+ LC G L A +L ++ + +A T +M+
Sbjct: 672 LNLLDRMVKRK--PFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMES 729
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
C + ++ M R+ T D V V G L EA M + V G+Q
Sbjct: 730 CLKKGVALSAYKVACQMFRRNLTPDLKLCEKVTKKLVLDGNLVEADKLMLRFVERGIQ 787
>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 418
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 141/284 (49%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E LE G P ++ +N LMH + G+ A VF + L P +FN ++NG K
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ +Q G P++ TY++LI GLCK ++ A + E+ D+ PN +T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A D +++M
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG LE A+ M K+ D +T LI GLC+ G
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K G + + + M+
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 140/256 (54%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + + + + P VV++N+L+ G + L L + M G+ PDV++Y+ L++ L
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ K D+AN +F +M+ L P TF +++G CKN D A+ +++ + P+L
Sbjct: 217 CKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+TYN LI GLCK G L+ A+ ++ E+ G P+ ITYTT++ + + +
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFKYRKR 336
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M ++ D Y +I+ + GR +A + +M++ G++ +I +Y +IN +CK+G
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396
Query: 257 LEAAYLLLDEMEKQGF 272
+ LL EM++ G+
Sbjct: 397 VWTGSKLLKEMQRDGY 412
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 144/284 (50%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + + P V S+N+LM+ +LG D
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M + P T+++++NGLCK D+A +F + + VP VT+ LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I K++ +P+ ITY T++ + K +++ M KG
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A Y ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
L EM G + + T+T++I+ CK G++ L+ M + G+
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 135/300 (45%), Gaps = 4/300 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F+ ++ ++ + +A+ +R ++H F T +++ L K + +E
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+ G+ + + +M + + +L + A+ + + T++ ++K+G L
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
E M GVQ D+ +Y+ LIN CKE K++ A L DEM + T T LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLI 248
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
DG CK G + A + M +L YN ++ L K G + A ++ + M +K
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D TY++++ CK L +A K +K +R+ A A++ GL G +A+K+
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ D I +M +SPD++TYN+LI G + L + DL+DEM G
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y +L+ + G + A + + MI ++ + +++GLC+ + +A
Sbjct: 307 LKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+M R + G PE+ TY ++I CK G + T +LKE+ G+ P+ +T
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 39/238 (16%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ Y + D G+ + N M+ +G+ PDV TY+ LI G + S + + +L DEML+
Sbjct: 177 LMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNX 236
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ P+ ++ +L+ HC + G+ D A +++ M+ L+P T+N ++ GLCK
Sbjct: 237 LVPNGVTFTTLIDGHC--KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQ 294
Query: 120 ALRMFRGLQKHGFVPELVTYNIL-----------------------------------IK 144
A + + G P+ +TY L I
Sbjct: 295 AQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALIS 354
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
GLC+ GR A +L+E+ G P TYT I+ + G ++L M+R GY
Sbjct: 355 GLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 108/219 (49%), Gaps = 9/219 (4%)
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
GY + + ++ +FVK G ++ A + + ++ +VS+NTL+N Y K G L+
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
+ L + M+ G + D YT+++LI+GLCK + A + M N + ++D
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDG 250
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
K+G++D A+ +++ M + D TY+++++ LCK L A L+ G++
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310
Query: 377 KSAQKAVVDGLRHSGCRREAKK-----IQSKIRMAKISH 410
K ++DG G A K I+ IR+ +++
Sbjct: 311 KITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAY 349
>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 418
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 141/284 (49%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E LE G P ++ +N LMH + G+ A VF + L P +FN ++NG K
Sbjct: 125 EENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
+ R+ +Q G P++ TY++LI GLCK ++ A + E+ D G PN +T+
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A D +++M+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D +Y TLI+ CKEG LE A+ M K+ D +T LI GLC+ G
Sbjct: 305 KGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K G + + + M+
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQ 408
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 142/257 (55%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + + + G+ P VV++N+L+ G + L+ L + M G+ PDV++Y+ L++ L
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ K D+AN +F +M+ L P TF +++G CKN D A+ +++ + P+L
Sbjct: 217 CKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+TYN LI GLCK G L+ A+ ++ E+ G P+ TYTT++ + + E
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKR 336
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M ++ D Y +I+ + GR +A + +M++ G++ +I +Y +IN +CK+G
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396
Query: 257 LEAAYLLLDEMEKQGFE 273
+ LL EM++ G++
Sbjct: 397 VWXGSKLLKEMQRDGYK 413
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 149/288 (51%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + G+ P V S+N+LM+ +LG +
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M + P T+++++NGLCK D+A +F + G VP VT+ LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I K++ +P+ ITY T++ + K +++ M KG
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D F Y T+I K G L+ A +Y ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
L EM G + + T+T++I+ CK G++ L+ M + G+ ++
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDGYKPSV 416
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 140/300 (46%), Gaps = 4/300 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F+ ++ ++ + +A+ +R ++H F T +++ L K + +E
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENL 128
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+ G+ + + +M + + +L + A+ + G + T++ ++K+G L
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN 188
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
E M GVQ D+ +Y+ LIN CKE K++ A +L DEM +G + T T LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLI 248
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
DG CK G + A + M +L YN ++ L K G + A ++ + M +K
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLK 308
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D FTY++++ CK L +A + +K +R+ A A++ GL G +A+K+
Sbjct: 309 PDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 101/202 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ D + + M + G+ P+ VT+ +LI G +N + ++++ +ML
Sbjct: 211 VLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+ +YN+L++ L + G +A + +MI L P T+ +++G CK + A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETA 330
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K + V Y LI GLC+ GR A +L+E+ G P TYT I+
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 181 CFRNRKYKLGLEILSAMKRKGY 202
+ G ++L M+R GY
Sbjct: 391 FCKKGDVWXGSKLLKEMQRDGY 412
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 91/172 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ D I +M +SPD++TYN+LI G + L + DL+DEM+ G
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD ++Y +L+ + G + A + MI ++ + +++GLC+ + +A
Sbjct: 307 LKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+M R + G PE+ TY ++I CK G + +LKE+ G+ P+ +T
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDGYKPSVVT 418
>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
Length = 882
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 194/389 (49%), Gaps = 4/389 (1%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
LN + I V +N LI G RN +S +++LL+ M G PD+ +YN+LM+ +
Sbjct: 5 LNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCK 64
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
+G A ++ ++ +L P T+ +++ CK++ ++AL M+ + VP++VT
Sbjct: 65 IGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVT 124
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
Y ++ GLCK+G++ A+ + +E+ + G PN +Y T++ F+ + M
Sbjct: 125 YTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMV 184
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
+G FD Y ++ K G A D + ++ + + + V+Y+ LI+ +CK G +
Sbjct: 185 VRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVN 244
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
LLL EME++ + ++ ++DG K G + A + M + N+ Y ++
Sbjct: 245 KGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLI 304
Query: 319 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
D K + A+++F+ M+ + ++F S V+NL ++ R+ A +L + G+
Sbjct: 305 DGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLL 364
Query: 375 ILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ +++DG +G +A I ++
Sbjct: 365 PDRVNYTSMMDGFFKAGKESDAFNIAQEM 393
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 171/348 (49%), Gaps = 5/348 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M G+ PD V Y S++ G + S + ++ EM E DV +YN L++ LF+LGK
Sbjct: 358 MMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK 417
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
E+ M L P +ATFN M+N CK NAL++ ++ +G P +T NI
Sbjct: 418 Y-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNI 476
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
L++ LC AG + +L ++ G P T+ ++ ++R+ + L + G
Sbjct: 477 LVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMG 536
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
D Y T+I+ F ++G ++ AT + M+ G+ DI++YN LI+ YC L+ A+
Sbjct: 537 VKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAF 596
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+ +M +G + T+ IL+ GL A IK A + M + G N Y+ +V
Sbjct: 597 AVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGH 656
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
GK G + + ++ M K + TY+ ++ K K++ A +L+
Sbjct: 657 GKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELM 704
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 193/407 (47%), Gaps = 5/407 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ + G +L M E I P+V+ Y+S++ G T+ LL+ ++D++ +M++
Sbjct: 233 LIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRN 292
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V+ Y +L+ F+ + A +F++M L + +N L ++ + A
Sbjct: 293 ILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEAD 352
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ + G +P+ V Y ++ G KAG+ A I +E+ + + + Y ++
Sbjct: 353 ELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGL 412
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ KY+ + M++ G D + T+I A+ K G L A + +M + G++ +
Sbjct: 413 FKLGKYE-SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNS 471
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++ N L+ C G++E LL++M GF TH ++D K+ +
Sbjct: 472 ITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQ 531
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
+ +G +L YN ++ + G I A VF+ M K D TY++++H C +
Sbjct: 532 LVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSH 591
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
L A + L GV ++ GL + +EA + ++++
Sbjct: 592 LKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMK 638
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 186/393 (47%), Gaps = 5/393 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ + ++ M E G+ P+ +Y +LI + ++ + L M+ G
Sbjct: 128 IMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRG 187
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I DV Y +LM LF+ G + A +FQ ++ L P T++ +++G CK +
Sbjct: 188 IGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGE 247
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +++ P ++ Y+ ++ G K G L A +++++ PN Y T++
Sbjct: 248 LLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGY 307
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ + + L++ MK +G + F + + + GR++EA + + M++ G+ D
Sbjct: 308 FKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDR 367
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y ++++ + K GK A+ + EM ++ D + +LI+GL K G + H
Sbjct: 368 VNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTG- 426
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M ++G + +N +++ K+G + +A+ + M+ +S T + +V LC A
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
+ LL L G + KAV+D S
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKS 519
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 177/401 (44%), Gaps = 39/401 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID YC+ +L M+ G +PD+VTYN+L+ G + L + L+ E+ +
Sbjct: 22 VLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLV 81
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P+V +Y +L+ + ++A ++ +M L P T+ ++NGLCK+ + A
Sbjct: 82 NLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEA 141
Query: 121 LRMFRGLQKHGFVP-----------------------------------ELVTYNILIKG 145
+FR +++ G VP ++V Y L+ G
Sbjct: 142 KSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDG 201
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
L KAG A + + L + PN +TY+ ++ + G +L M+ K +
Sbjct: 202 LFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPN 261
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y +++ + K G L EA D M +MV + ++ Y TLI+ Y K + A L
Sbjct: 262 VIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFK 321
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM+ +G E + + ++ L ++G ++ A + M G + Y ++D K G
Sbjct: 322 EMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAG 381
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 362
K A N+ + M K D Y+ +++ L K + S S
Sbjct: 382 KESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESES 422
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 155/349 (44%), Gaps = 41/349 (11%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
MR+ G++PD T+N++I + L +L LL+EM G+ P+ + N L+ L G+
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
++ + DM+ P T +L+ K+R D L L G +L TYN
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNT 546
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
LI C+ G +R A + K++ G + ITY ++
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIH---------------------- 584
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
GYC LK+A QM+T+GV ++ +YN L+ ++ A
Sbjct: 585 ------GYCIS-------SHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAA 631
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG-ARLHLEYMNKIGFDSNLEAYNCIVDR 320
L+++M+++G + T+ IL+ G K GN+K +L+ E + K GF YN ++
Sbjct: 632 GLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITK-GFVPKTRTYNVLISC 690
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
K K+ A + + M+V+ +S TY ++ K + P +K L
Sbjct: 691 FAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSL 739
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 151/373 (40%), Gaps = 84/373 (22%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+AYC+ + +LN M+ G+ P+ +T N L+ + ++DLL++ML MG
Sbjct: 442 MINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMG 501
Query: 62 IPP-----------------------------------DVWSYNSLMHCLFQLGKPDEAN 86
P D+ +YN+L+ +LG A
Sbjct: 502 FHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRAT 561
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
VF+DM+ + T+N +++G C + + A + + G P + TYNIL+ GL
Sbjct: 562 LVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGL 621
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
A ++ A ++ ++ + G PNA TY ++ G
Sbjct: 622 SAARLIKEAAGLVNQMKERGLVPNATTYDILV--------------------------SG 655
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
G KIG +KE +M+T G +YN LI+ + K K+ A L+ E
Sbjct: 656 HG---------KIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQE 706
Query: 267 MEKQGFECDKYTHTILIDG-------------LCKAGNIKGARLHLEYMNKIGFDSNLEA 313
M+ +G + T+ ILI G L ++ + RL E MN+ GF
Sbjct: 707 MQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRL-FEEMNEKGFIPCENT 765
Query: 314 YNCIVDRLGKDGK 326
CI L K GK
Sbjct: 766 LACISFTLAKPGK 778
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 12/129 (9%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
M G P TYN LI+ + +S + +L+ EM GIPP+ +Y+ L+ ++L
Sbjct: 671 EMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLS 730
Query: 81 K-PD-----------EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
K P+ EA R+F++M PC T + L K +A R+ L
Sbjct: 731 KQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLY 790
Query: 129 KHGFVPELV 137
K V EL+
Sbjct: 791 KKKTVQELL 799
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 192/391 (49%), Gaps = 16/391 (4%)
Query: 34 YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
+NSLI L S+ + M E+G+ P V ++NSL+ + + G+ A ++F +M+
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227
Query: 94 -CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
+TP T TFNI++ G C N D F+ + + P++VTYN L+ GLC+AG++
Sbjct: 228 DTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKV 287
Query: 153 RTARWILKEL--GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
+ A ++K + +PN +TYTT+++ + L +L+ M +G + Y
Sbjct: 288 KIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYN 347
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQL-DIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
T+I + +L + + +E MV DG + D + NTLI +C GKLE A+ + ++M +
Sbjct: 348 TLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSE 407
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLE-------YMNKIGFDSNLEAYNCIVDRLG 322
+ D T+++L+ LC+ G+ + A + ++ +G + AYN + + L
Sbjct: 408 LRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLC 467
Query: 323 KDGKIDHAINVFESME---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
+GK A VF + +D +Y +++ C+ + LL+ L+
Sbjct: 468 SNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAET 527
Query: 380 QKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
++DGL G A K S +M K SH
Sbjct: 528 YGLMIDGLLKKGDPVLAHK--SLEKMLKSSH 556
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 160/337 (47%), Gaps = 15/337 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C D G+ M PDVVTYN+L+ G R + + +++ M++
Sbjct: 241 ILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKK 300
Query: 61 G--IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
+ P+V +Y +L+ +C+ Q EA + +M+ L P T+N ++ GLC+ +
Sbjct: 301 SPNLSPNVVTYTTLIRGYCMKQ--DMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQK 358
Query: 117 TDNALRMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D + G+ GF+P+ T N LIK C G+L A + +++ + P++ TY+
Sbjct: 359 LDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYS 418
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI-------GRLKEATDY 228
+++ + ++ E + K G ++AA+ + G+ K+A
Sbjct: 419 VLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERV 478
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
Q++ G Q D SY TLI +C+EG EA + LL M ++ F D T+ ++IDGL K
Sbjct: 479 FRQLMKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLK 537
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
G+ A LE M K ++ I+ L + G
Sbjct: 538 KGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKG 574
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 152/340 (44%), Gaps = 11/340 (3%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G++PD T+N LI G NS++ EM PDV +YN+L+ L + GK A
Sbjct: 231 GVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIA 290
Query: 86 NRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+ V + M+ +L+P T+ ++ G C + AL + + G P +TYN LI
Sbjct: 291 HNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLI 350
Query: 144 KGLCKAGRLRTARWILKEL-GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
+GLC+A +L + IL+ + GD G P+ T T++K K + + M
Sbjct: 351 QGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRV 410
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD-------IVSYNTLINLYCKEG 255
D Y ++ + + G + A ++ +++ + L + +YN + C G
Sbjct: 411 QPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNG 470
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
K + A + ++ K+G + D ++ LI G C+ G + L M + F + E Y
Sbjct: 471 KTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYG 529
Query: 316 CIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA 355
++D L K G A E M +++ H++ A
Sbjct: 530 LMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAA 569
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 126/302 (41%), Gaps = 44/302 (14%)
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
+L P + + L L R AL FR ++ GF +Y ++I+ L ++ L
Sbjct: 87 AELAPSLSKTTV-LQTLQLIRTPAKALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNA 145
Query: 155 AR-WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
AR ++ SG A KLG +++ R +G+
Sbjct: 146 ARNFVFSIEKKSGGA------------------VKLGDRFFNSLIR------SYGWA--- 178
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGF 272
G +E+ + M GV +V++N+L+++ K G+ A L DEM + G
Sbjct: 179 ------GLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGV 232
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
D YT ILI G C + + M++ D ++ YN +VD L + GK+ A N
Sbjct: 233 TPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHN 292
Query: 333 VFESMEVKDS-------FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 385
V + M VK S TY++++ C + + A LL + G++ K ++
Sbjct: 293 VVKGM-VKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQ 351
Query: 386 GL 387
GL
Sbjct: 352 GL 353
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 126/312 (40%), Gaps = 42/312 (13%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE-- 59
LI A+C + +++ +M E + PD TY+ L+ + + + DE+ E
Sbjct: 385 LIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKE 444
Query: 60 -----MGIPPDVWSYNSLMHCLFQLGKPDEANRVF-QDMICGDLTPCTATFNIMLNGLCK 113
+G P V +YN + L GK +A RVF Q M G P ++ ++ G C+
Sbjct: 445 ILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDP--PSYKTLILGHCR 502
Query: 114 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+ + + + FVP+ TY ++I GL K G A L+++ S H P
Sbjct: 503 EGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAI 562
Query: 174 YTTIMKCCFR---------------NRKYKLGLEIL---------SAMKRKGYTFDGF-- 207
+ +I+ R+ + +++ S ++ K + G
Sbjct: 563 FHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLY 622
Query: 208 --GYCTVIAAFVKI----GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
GY + V +L EA + + +DI +T+I+ CK K+ A+
Sbjct: 623 ENGYLVKMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAF 682
Query: 262 LLLDEMEKQGFE 273
L E+ ++G +
Sbjct: 683 ALYYELVEKGMQ 694
>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 766
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 169/353 (47%), Gaps = 4/353 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ + ++ M ++ + P +VTY+SL G ++ L SL + +
Sbjct: 363 ILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAE 422
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G DV SYN+L++ A ++ +M P + TFN +++G CK + D A
Sbjct: 423 GYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKA 482
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F + K G + T NI+ + G A ++ E+ D G PN+ TY ++K
Sbjct: 483 LEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKW 542
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ +K + E+L M + Y T+I + K +A +M+ G+
Sbjct: 543 LCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPS 602
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+Y LIN++ K++ AY L EM K+G D+ T +I G CK G++K A E
Sbjct: 603 IVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYE 662
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
M++ G N+ Y C++D K ++D A +F M+ D TY++++
Sbjct: 663 EMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALI 715
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 170/360 (47%), Gaps = 4/360 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L M G SP VVTY + I G R + +L L+ ++ P + + YN+++H
Sbjct: 275 VLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFC 334
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G+ EA + +DM ++P +++I+++GLCK + AL + + + P LV
Sbjct: 335 RNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLV 394
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY+ L GLCK+G + + LG G+ + I+Y T++ R +++ M
Sbjct: 395 TYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEM 454
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ G + F + +I F K RL +A + M+ GVQL+I + N + + + +EG
Sbjct: 455 RMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHF 514
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A L++E++ G + YT+ I+I LCK + A L M K YN +
Sbjct: 515 WEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTL 574
Query: 318 VDRLGKDGKIDHAINVFESM---EVKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+D K A+ ++ M + S TY+ +++ ++ A L +K G+
Sbjct: 575 IDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGL 634
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 184/414 (44%), Gaps = 44/414 (10%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
T+L+ ++A + ++ N LI N++L + D+ + G+ ++ S N L++C
Sbjct: 164 TLLDSPQDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCF 223
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN-----ALRMFRGLQKHG 131
+ + + +F+++ +P T+ IM+N CK + N A + ++ +G
Sbjct: 224 AEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNG 283
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
P +VTY I GLC+AG + A ++++L N+ Y ++ RN +
Sbjct: 284 ESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAF 343
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV------------------ 233
E+L M+ G + + Y +I K G++++A D +E+MV
Sbjct: 344 ELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGL 403
Query: 234 -----------------TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
+G + D++SYNTLIN + + + +A L+ EM G +
Sbjct: 404 CKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNS 463
Query: 277 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
+T LI G CK + A M K+G N+ N + D ++G A+ +
Sbjct: 464 FTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINE 523
Query: 337 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
++ V +S+TY+ ++ LCK ++ A ++L LK+ V ++DG
Sbjct: 524 VQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDG 577
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 142/305 (46%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+++ MR G P+ T+N LI G + L +L++ ML++G+ ++++ N +
Sbjct: 450 LVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFN 509
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G EA ++ ++ + P + T+NI++ LCK + T+ A + + K+ P +
Sbjct: 510 REGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAI 569
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
YN LI G K A + ++ G P+ +TYT ++ K + + M
Sbjct: 570 HYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEM 629
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+KG D + +IA F K+G +K A E+M G ++V+Y LI+ Y K ++
Sbjct: 630 IKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRM 689
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A L ++M++ D T+T LI G G R M + G N AY +
Sbjct: 690 DKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749
Query: 318 VDRLG 322
LG
Sbjct: 750 GLHLG 754
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID Y + + + +M + GI P +VTY LI + S + + L EM++ G
Sbjct: 574 LIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKG 633
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD + ++ ++G A ++++M +P T+ +++G K + D A
Sbjct: 634 LVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKAD 693
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
+F +++ P+ +TY LI G G R + E+ ++G PN Y T+
Sbjct: 694 FLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 126/302 (41%), Gaps = 27/302 (8%)
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
F+ + HGF + + I+I L AG + L+++ N
Sbjct: 108 FFKAVSFHGFSHSIYAFKIIIHVLASAGLQMEVQIFLRDIISYYKEVNLDVSELFSTLLD 167
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ +G I+ A +I F + L +A D Q G++L+I+
Sbjct: 168 SPQDAHMGGSIIVA-------------NVLIKVFAENNMLVDAADVFVQARRFGLELNIL 214
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG-----NIKGARL 297
S N L+N + + + E L +E++ G + +T+TI+++ CK +I A
Sbjct: 215 SCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATE 274
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLC 353
LE M G + Y + L + G ++ A+ + + +++ S+ Y++++H C
Sbjct: 275 VLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFC 334
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA-----KKIQSKIRMAKI 408
+ L A +LL G+ + ++DGL G +A + +QS ++ + +
Sbjct: 335 RNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLV 394
Query: 409 SH 410
++
Sbjct: 395 TY 396
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 68/142 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLI+ + Y + M + G+ PD + + +IAG + + + L +EM +
Sbjct: 608 MLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQW 667
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V +Y L+ F++ + D+A+ +F M ++TP T+ ++ G Y+D
Sbjct: 668 GKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRV 727
Query: 121 LRMFRGLQKHGFVPELVTYNIL 142
MF ++++G P Y L
Sbjct: 728 REMFNEMKENGVFPNYTAYATL 749
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 168/334 (50%), Gaps = 4/334 (1%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
R+ E G VT N+LI G L + ++ EMLE G+P D +YN+L+ G
Sbjct: 478 RLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEG 537
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K + R+ ++M + P T+N +L GLC D+A++++ + G + + TY
Sbjct: 538 KVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYG 597
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
I+++G CKA R+ + EL N+I Y I+K +N L++L MK K
Sbjct: 598 IMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSK 657
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G + Y ++I IG +++A +++M +G ++V Y LI YCK G+++ A
Sbjct: 658 GILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTA 717
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
EM +K+T+T++IDG CK GN++ A L M + G ++ YN + +
Sbjct: 718 ESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNG 777
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVH 350
K +D+A V + M + D TY+++VH
Sbjct: 778 FCKANDMDNAFKVCDQMATEGLPVDEITYTTLVH 811
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 191/413 (46%), Gaps = 43/413 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ + + I + M I+P VT SL+ G ++ + + + L+E+L G
Sbjct: 354 LIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSG 413
Query: 62 --IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
I PD + S++H L + + A R + M+ + P +++ GLCK+
Sbjct: 414 LSIHPD--NCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLE 471
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM- 178
A ++ L + G VT N LI GLC AG+L A I+KE+ + G + ITY ++
Sbjct: 472 ATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALIL 531
Query: 179 --------KCCFRNR--------------------------KYKLGLEILSAMKRKGYTF 204
+ CFR R K +++ K G
Sbjct: 532 GFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLIS 591
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
+ Y ++ + K R+++ + ++++ ++L+ + YN +I +C+ G + AA LL
Sbjct: 592 NIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLL 651
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+ M+ +G + T++ LI G+C G ++ A+ ++ M K GF N+ Y ++ K
Sbjct: 652 ENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKL 711
Query: 325 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
G++D A + + M + FTY+ M+ CK + A+ LL+ +SG+
Sbjct: 712 GQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGI 764
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 142/319 (44%), Gaps = 35/319 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C I+ M E G+ D +TYN+LI G + L +EM + G
Sbjct: 494 LIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRG 553
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK-NRYTD-- 118
I PD+++YN L+ L +GK D+A +++ + L T+ IM+ G CK NR D
Sbjct: 554 IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVE 613
Query: 119 --------------------------------NALRMFRGLQKHGFVPELVTYNILIKGL 146
AL++ ++ G +P TY+ LI G+
Sbjct: 614 NLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGV 673
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C G + A+ ++ E+ G PN + YT ++ + + M +
Sbjct: 674 CNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNK 733
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
F Y +I + K+G +++A + + +M G+ D+V+YN L N +CK ++ A+ + D+
Sbjct: 734 FTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQ 793
Query: 267 MEKQGFECDKYTHTILIDG 285
M +G D+ T+T L+ G
Sbjct: 794 MATEGLPVDEITYTTLVHG 812
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 176/394 (44%), Gaps = 35/394 (8%)
Query: 1 MLIDAY-CQF--VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 57
+LI Y QF + F + + G P + T N L++ + + ++ M
Sbjct: 176 LLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVM 235
Query: 58 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
E G PDV+S+ ++++ L + GK + A +F M ++P T+N ++NGLC+N
Sbjct: 236 SE-GACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRL 294
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
DNA + + G P L TY LI GL K +L E+ SG PN + + +
Sbjct: 295 DNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNL 354
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + + L+I M K T +++ F K +++ A + +E++++ G+
Sbjct: 355 IDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGL 414
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+ + ++++ CK+ + +A+ M + F T+L+ GLCK G
Sbjct: 415 SIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGK------ 468
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKR 357
HLE E + ++++ K+ T ++++H LC A +
Sbjct: 469 HLEAT---------ELWFRLLEKGSPASKV----------------TSNALIHGLCGAGK 503
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
LP AS+++ L+ G+ + + A++ G + G
Sbjct: 504 LPEASRIVKEMLERGLPMDRITYNALILGFCNEG 537
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 98/178 (55%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I A+CQ + A +L M+ GI P+ TY+SLI G L+ + L+DEM +
Sbjct: 633 IIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKE 692
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V Y +L+ +LG+ D A + +MI ++ P T+ +M++G CK + A
Sbjct: 693 GFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKA 752
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
+ +++ G VP++VTYN+L G CKA + A + ++ G + ITYTT++
Sbjct: 753 NNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLV 810
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 106/249 (42%), Gaps = 35/249 (14%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++ YC+ + + N + + + + YN +I +N ++ +L LL+ M
Sbjct: 598 IMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSK 657
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+ +Y+SL+H + +G ++A + +M P + ++ G CK D A
Sbjct: 658 GILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTA 717
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + P TY ++I G CK G + A +L ++ +SG P+ +TY +
Sbjct: 718 ESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTN- 776
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
G+C K + A +QM T+G+ +D
Sbjct: 777 ---------------------------GFC-------KANDMDNAFKVCDQMATEGLPVD 802
Query: 241 IVSYNTLIN 249
++Y TL++
Sbjct: 803 EITYTTLVH 811
>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hermannioides]
Length = 417
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 150/285 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV+YN+L+ G R L L ML
Sbjct: 133 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 192
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN +F +M+ L P TF +++G CKN D A
Sbjct: 193 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDLA 252
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + +P+L+TYN LI GLCK G L+ A ++ E+ G P+ TYTT++
Sbjct: 253 MEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDG 312
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + E M ++ D Y +I+ + GR +A + +M++ ++ D
Sbjct: 313 CCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVDLKPD 372
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y +IN +CK+G + LL EM++ G T+ +L++G
Sbjct: 373 TGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 417
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 159/309 (51%), Gaps = 2/309 (0%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ ++ + + + D + + G+ P V SYN+
Sbjct: 109 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 168
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M+ + P T+++++NGLCK D+A +F + G
Sbjct: 169 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 228
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
+P VT+ LI G CK GR+ A I K + P+ ITY T++ + K
Sbjct: 229 LIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAH 288
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+++ M KG D F Y T+I K G L A ++ ++M+ + ++LD V+Y LI+
Sbjct: 289 DLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGL 348
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 310
C+EG+ A +L EM + D T+T++I+ CK G++ KG++L L+ M + G +
Sbjct: 349 CQEGRSVDAEKMLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKL-LKEMQRDGHAPS 407
Query: 311 LEAYNCIVD 319
+ YN +++
Sbjct: 408 VVTYNVLMN 416
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 143/298 (47%), Gaps = 1/298 (0%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E+LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 117 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 176
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ + G P++ TY++LI GLCK ++ A + E+ G PN +T+
Sbjct: 177 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 236
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + D Y T+I K G LK+A D +++M
Sbjct: 237 TTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 296
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D +Y TLI+ CKEG L+ A+ M ++ D +T LI GLC+ G
Sbjct: 297 KGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 356
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
A L M + + Y I++ K G + + + M+ +D S + +N+
Sbjct: 357 AEKMLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQ-RDGHAPSVVTYNV 413
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 141/273 (51%), Gaps = 4/273 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
FNI+++ CK+ A +F + K G P +V+YN L+ G + G L + +
Sbjct: 131 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 190
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
SG P+ TY+ ++ + K E+ M KG +G + T+I K GR+
Sbjct: 191 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVD 250
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A + ++M++ + D+++YNTLI CK+G L+ A+ L+DEM +G + DK+T+T LI
Sbjct: 251 LAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 310
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK-IDHAINVFESMEV--- 339
DG CK G++ A H + M + + AY ++ L ++G+ +D + E + V
Sbjct: 311 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVDLK 370
Query: 340 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
D+ TY+ +++ CK + SKLL + G
Sbjct: 371 PDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDG 403
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 4/263 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y + + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 99 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 158
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ ++Y T+M R G + SAM G D + Y +I K ++ +A
Sbjct: 159 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 218
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ + V++ TLI+ CK G+++ A + M Q D T+ LI GL
Sbjct: 219 ELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGL 278
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K A ++ M+ G + Y ++D K+G +D A + M + D
Sbjct: 279 CKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 338
Query: 343 FTYSSMVHNLCKAKRLPSASKLL 365
Y++++ LC+ R A K+L
Sbjct: 339 VAYTALISGLCQEGRSVDAEKML 361
>gi|115482518|ref|NP_001064852.1| Os10g0476900 [Oryza sativa Japonica Group]
gi|110289255|gb|AAP54273.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|110289256|gb|ABG66138.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113639461|dbj|BAF26766.1| Os10g0476900 [Oryza sativa Japonica Group]
gi|215737151|dbj|BAG96080.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 599
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 186/391 (47%), Gaps = 6/391 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L M +G PD ++ N LIA R LS +L +L++M G P ++N+L+ C+F
Sbjct: 194 VLEVMVLSGGVPDTISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMF 253
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
D A +++ + P T ++++ +CKN AL + L G P++V
Sbjct: 254 NQRMYDRAISFWKEQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDVV 313
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN LI CKAGRL A++IL L G PN TY ++ R++ ++L M
Sbjct: 314 TYNALISASCKAGRLNDAKFILTRLAAEGLEPNGTTYCILLHALCNMRRWDEVCDLLEDM 373
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ D Y I F K G L +A D +E+MV + DIV+ NTL+N K+G +
Sbjct: 374 NQVNRDPDVTTYNIFINYFCKYGHLDQAIDVLERMVINNCSPDIVTCNTLLNAISKKGMV 433
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
E A + + + G++ T+ LID L K +K A + + M G + Y +
Sbjct: 434 EEALGIARCIRENGYKLVLITYNTLIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSL 493
Query: 318 VDRLGKDGKIDHAINVFESM-----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
V K D A+++ M EVK + T+ ++ LC+ ++ +A+++ L
Sbjct: 494 VMGFCKKDMADEALDLLNQMLTLGFEVKTT-TFVMVIQALCRDGKVEAAAEITKVMLSKN 552
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
S ++V + SG +EA+ + K+
Sbjct: 553 SIPGNSLCSSIVTKVAKSGWNKEAQMLHQKL 583
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 149/330 (45%), Gaps = 35/330 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL-------------- 46
MLI C+ + +L MR +G SP +T+N+LI +
Sbjct: 212 MLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYDRAISFWKEQLRL 271
Query: 47 --------------LSC-------SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
L C +L++LDE+ G PDV +YN+L+ + G+ ++A
Sbjct: 272 GWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNALISASCKAGRLNDA 331
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+ + L P T+ I+L+ LC R D + + + P++ TYNI I
Sbjct: 332 KFILTRLAAEGLEPNGTTYCILLHALCNMRRWDEVCDLLEDMNQVNRDPDVTTYNIFINY 391
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
CK G L A +L+ + + +P+ +T T++ + + L I ++ GY
Sbjct: 392 FCKYGHLDQAIDVLERMVINNCSPDIVTCNTLLNAISKKGMVEEALGIARCIRENGYKLV 451
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y T+I A K +K+A ++M++DG+ D ++Y +L+ +CK+ + A LL+
Sbjct: 452 LITYNTLIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFCKKDMADEALDLLN 511
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
+M GFE T ++I LC+ G ++ A
Sbjct: 512 QMLTLGFEVKTTTFVMVIQALCRDGKVEAA 541
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 90/180 (50%), Gaps = 1/180 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ I+ +C++ D +L RM SPD+VT N+L+ ++ ++ +L + + E
Sbjct: 387 IFINYFCKYGHLDQAIDVLERMVINNCSPDIVTCNTLLNAISKKGMVEEALGIARCIREN 446
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G + +YN+L+ L + + +A +F +M+ ++P T+ ++ G CK D A
Sbjct: 447 GYKLVLITYNTLIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFCKKDMADEA 506
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP-NAITYTTIMK 179
L + + GF + T+ ++I+ LC+ G++ A I K + P N++ + + K
Sbjct: 507 LDLLNQMLTLGFEVKTTTFVMVIQALCRDGKVEAAAEITKVMLSKNSIPGNSLCSSIVTK 566
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 8/244 (3%)
Query: 126 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 185
G KHG Y ++ C +G+L A ++ E+ G P I++ +
Sbjct: 131 GFSKHGGK----CYADNLRRYCNSGKLIQACCVIDEMVLHGQIPETKCCVRIIRGLVKTG 186
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
K +L M G D +IA + G+L A +E M G +++N
Sbjct: 187 KANKARHVLEVMVLSGGVPDTISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFN 246
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
TLI + + A E + G+ + T T+L+D +CK + A L+ ++
Sbjct: 247 TLIRCMFNQRMYDRAISFWKEQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLE 306
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSA 361
G ++ YN ++ K G+++ A + + + + TY ++H LC +R
Sbjct: 307 GCQPDVVTYNALISASCKAGRLNDAKFILTRLAAEGLEPNGTTYCILLHALCNMRRWDEV 366
Query: 362 SKLL 365
LL
Sbjct: 367 CDLL 370
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 61/126 (48%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LIDA + + + M GISPD +TY SL+ G + + +LDLL++ML +G
Sbjct: 458 LIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFCKKDMADEALDLLNQMLTLG 517
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
++ ++ L + GK + A + + M+ + P + + ++ + K+ + A
Sbjct: 518 FEVKTTTFVMVIQALCRDGKVEAAAEITKVMLSKNSIPGNSLCSSIVTKVAKSGWNKEAQ 577
Query: 122 RMFRGL 127
+ + L
Sbjct: 578 MLHQKL 583
>gi|302765375|ref|XP_002966108.1| hypothetical protein SELMODRAFT_85930 [Selaginella moellendorffii]
gi|300165528|gb|EFJ32135.1| hypothetical protein SELMODRAFT_85930 [Selaginella moellendorffii]
Length = 382
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 185/361 (51%), Gaps = 7/361 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ M+ AGI D V Y L++G + L +L +L EM +
Sbjct: 18 ILIDGLCKAKRSIDVLRCFRTMQGAGIVADTVIYTVLLSGLWKEKRLDQALAILHEMRDH 77
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V +YNSL+ L + +PD A +F+ M + +P T+N +L+GL ++A
Sbjct: 78 GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSP-LVTYNTLLDGLFWTGKLESA 136
Query: 121 L--RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
+ + ++ G P+++T IL+ GLCK ++ A +L E+ D+G PN +T +++
Sbjct: 137 MAVELLESMKARGCSPDVITSTILVDGLCKESKVAAAWEVLCEMLDAGCVPNLVTSKSLL 196
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
R R+ L ++ M +G T + Y T+I K+GR+K+A + E M DG
Sbjct: 197 HGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAGNLYEVMTGDGCD 256
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL-IDG-LCKAGNI-KGA 295
D+V+Y+TLI+ CK G+++ A+LLL M + G T+ + +G + K ++ KG
Sbjct: 257 ADVVTYSTLIDGLCKGGRVDEAHLLLARMVRMGTPSSTLTYNLQHFEGKMVKVDSLEKGM 316
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA 355
+H++ K G+ + N +VD K G + A VF SM +++ ++ A
Sbjct: 317 AIHIQAAEK-GYKRDDFLSNTLVDMYAKCGSMVEAERVFRSMPCHSLVSWTVLMLGYVLA 375
Query: 356 K 356
K
Sbjct: 376 K 376
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 143/290 (49%), Gaps = 7/290 (2%)
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
F +M ++ P +I+++GLCK + + + LR FR +Q G V + V Y +L+ GL K
Sbjct: 1 FDEMRSNNMVPNMFLCSILIDGLCKAKRSIDVLRCFRTMQGAGIVADTVIYTVLLSGLWK 60
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
RL A IL E+ D G PN +TY +++ +N + E+ MK +
Sbjct: 61 EKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECS-PLVT 119
Query: 209 YCTVIAAFVKIGRLKE--ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T++ G+L+ A + +E M G D+++ L++ CKE K+ AA+ +L E
Sbjct: 120 YNTLLDGLFWTGKLESAMAVELLESMKARGCSPDVITSTILVDGLCKESKVAAAWEVLCE 179
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M G + T L+ GLC+A + A + M G N+ Y ++D L K G+
Sbjct: 180 MLDAGCVPNLVTSKSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR 239
Query: 327 IDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
+ A N++E M D TYS+++ LCK R+ A LL ++ G
Sbjct: 240 VKDAGNLYEVMTGDGCDADVVTYSTLIDGLCKGGRVDEAHLLLARMVRMG 289
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 152/301 (50%), Gaps = 4/301 (1%)
Query: 54 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 113
DEM + P+++ + L+ L + + + R F+ M + T + ++L+GL K
Sbjct: 1 FDEMRSNNMVPNMFLCSILIDGLCKAKRSIDVLRCFRTMQGAGIVADTVIYTVLLSGLWK 60
Query: 114 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+ D AL + ++ HG P +VTYN LI GLCK A+ + + + +P +T
Sbjct: 61 EKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSP-LVT 119
Query: 174 YTTIMKCCFRNRKYK--LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 231
Y T++ F K + + +E+L +MK +G + D ++ K ++ A + + +
Sbjct: 120 YNTLLDGLFWTGKLESAMAVELLESMKARGCSPDVITSTILVDGLCKESKVAAAWEVLCE 179
Query: 232 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
M+ G ++V+ +L++ C+ ++ A L+ +M +G + T+ LIDGLCK G
Sbjct: 180 MLDAGCVPNLVTSKSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR 239
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHN 351
+K A E M G D+++ Y+ ++D L K G++D A + M V+ S++ +N
Sbjct: 240 VKDAGNLYEVMTGDGCDADVVTYSTLIDGLCKGGRVDEAHLLLARM-VRMGTPSSTLTYN 298
Query: 352 L 352
L
Sbjct: 299 L 299
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 170/346 (49%), Gaps = 5/346 (1%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
GI D+ + + LI + L +L ++L++G+ P + ++ +L++ L GK D+
Sbjct: 92 GIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQV 151
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
++ DM+ L P T+N+++N L K+ + AL + ++K G VP +V Y+ LI G
Sbjct: 152 MMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDG 211
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
C G++ AR + + G PN TYT++M + + + +++L RKG D
Sbjct: 212 YCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPD 271
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ T+I+ + GR A + G +I++Y L++ CK G LE A+ L
Sbjct: 272 IVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQ 331
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM++ + + +TILID LCK G IK + + G N+ Y +V L K+G
Sbjct: 332 EMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEG 391
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
I A +F ME D Y+ ++ + K PS ++ L+
Sbjct: 392 LIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKD-PSMARQLVE 436
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 178/367 (48%), Gaps = 7/367 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P +V ++ L + R + L E+ +GI D+ S + L++C L + D V
Sbjct: 60 PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
++ L P TF +LNGLC D + ++ + G P + TYN++I L K
Sbjct: 120 LSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSK 179
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGF 207
+G+ A LK++ G PN + Y+T++ C R + + + M KG T + +
Sbjct: 180 SGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDE-ARSVFDLMVSKGCTPNVY 238
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y +++ + KI R++EA +++ + G+ DIV++ T+I+ C+ G+ AA L +
Sbjct: 239 TYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYI 298
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
G + T+ +L+DGLCK GN++ A + M + NL Y ++D L K GKI
Sbjct: 299 CAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKI 358
Query: 328 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
+F + + + +TY+++V LCK + A KL + G K A +
Sbjct: 359 KDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVI 418
Query: 384 VDG-LRH 389
+ G L+H
Sbjct: 419 IQGFLQH 425
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 166/345 (48%), Gaps = 35/345 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C D G ++L+++ + G+ P +VT+ +L+ G + + L D+ML
Sbjct: 102 ILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVR 161
Query: 61 GIPPDVWSYNSLMHCLFQLGKP-----------------------------------DEA 85
G+ P+V++YN +++ L + GK DEA
Sbjct: 162 GLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEA 221
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
VF M+ TP T+ ++NG CK + A+++ + G VP++VT+ +I G
Sbjct: 222 RSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISG 281
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LC+AGR A+ + + + GH PN +TY ++ ++ + + M+R +
Sbjct: 282 LCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPN 341
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y +I + K G++K+ + +++ +G++ ++ +Y L+ CKEG + A+ L
Sbjct: 342 LVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFR 401
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+ME+ G DK + ++I G + + AR +E M GF ++
Sbjct: 402 KMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSAD 446
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 135/266 (50%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
L +M + G P+VV Y++LI G + + + D M+ G P+V++Y SLM+ +
Sbjct: 190 LKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCK 249
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
+ + +EA ++ + + L P TF +++GLC+ A ++FR + HG P ++T
Sbjct: 250 IERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMT 309
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
Y +L+ GLCK G L A + +E+ S PN + YT ++ + K K G E+ S +
Sbjct: 310 YGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLI 369
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
+G + + Y ++ A K G + EA +M DG D +YN +I + +
Sbjct: 370 DEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPS 429
Query: 259 AAYLLLDEMEKQGFECDKYTHTILID 284
A L++EM +GF D T +L D
Sbjct: 430 MARQLVEEMVNRGFSADAATRALLND 455
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 157/361 (43%), Gaps = 39/361 (10%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
D+A F+ M+ PC F+ + + + + + + + + + ++ G ++ + +IL
Sbjct: 44 DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
I C R+ +L ++ G P+ +T+TT++ K + + M +G
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGL 163
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI-------------- 248
+ + Y +I + K G+ EA +++QM G ++V+Y+TLI
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARS 223
Query: 249 ---------------------NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
N YCK ++E A LLDE ++G D T T +I GLC
Sbjct: 224 VFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLC 283
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFT 344
+AG A+ Y+ G N+ Y ++D L K G ++ A +F+ M+ VK +
Sbjct: 284 RAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLV 343
Query: 345 -YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
Y+ ++ +LCK ++ +L + G++ A+V L G EA K+ K+
Sbjct: 344 IYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKM 403
Query: 404 R 404
Sbjct: 404 E 404
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 71/142 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ + + + + M+ + + P++V Y LI + + +L +++
Sbjct: 312 VLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDE 371
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V++Y +L+ L + G EA+++F+ M TP +N+++ G +++ A
Sbjct: 372 GLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMA 431
Query: 121 LRMFRGLQKHGFVPELVTYNIL 142
++ + GF + T +L
Sbjct: 432 RQLVEEMVNRGFSADAATRALL 453
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 149/298 (50%), Gaps = 1/298 (0%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E LE G P ++ +N LMH + G+ A VF + L P +FN ++NG K
Sbjct: 129 EESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 188
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
+ R+ + +Q G P++ TY++LI GLCK ++ + E+ D G PN +T+
Sbjct: 189 GDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTF 248
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A D +++M
Sbjct: 249 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSM 308
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG LE A+ M K+ D +T LI GLC+ G
Sbjct: 309 KGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVD 368
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
A L M +G + Y I++ K G + + + M+ +D + S + +N+
Sbjct: 369 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQ-RDGYVPSVVTYNV 425
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 154/285 (54%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ ++C+ ++ + + + G+ P VV++N+L+ G + L+ L M
Sbjct: 145 ILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQAS 204
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+ N +F +M+ L P TF +++G CKN D A
Sbjct: 205 GVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLA 264
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + P+LVTYN LI GLCK G L+ A+ ++ E+ G P+ ITYTT++
Sbjct: 265 MEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDG 324
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + E M ++ D Y +I+ + GR +A + +M++ G++ +
Sbjct: 325 SCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 384
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
I +Y +IN +CK+G + L+ EM++ G+ T+ +L++G
Sbjct: 385 IGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVTYNVLMNG 429
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 152/296 (51%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + G+ P V S+N+LM+ +LG +
Sbjct: 133 ECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN 192
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ + M + P T+++++NGLCK D+ +F + G VP VT+ LI
Sbjct: 193 EXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLI 252
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I K++ +P+ +TY T++ + K +++ M KG
Sbjct: 253 DGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 312
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A +Y +M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 313 PDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 372
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
L EM G + + T+T++I+ CK G++ ++ M + G+ ++ YN +++
Sbjct: 373 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVTYNVLMN 428
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 118/273 (43%), Gaps = 39/273 (14%)
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G+ L +NIL+ CK G +R A+ + + G P+ +++ T+M
Sbjct: 135 GYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMN----------- 183
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
++K+G L E + M GVQ D+ +Y+ LIN
Sbjct: 184 ------------------------GYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLING 219
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
CKE K++ L DEM G + T T LIDG CK G + A + M +
Sbjct: 220 LCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 279
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
L YN ++ L K G + A ++ + M +K D TY++++ CK L +A +
Sbjct: 280 LVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRX 339
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+K +R+ A A++ GL G +A+K+
Sbjct: 340 RMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 372
>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 418
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 141/284 (49%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E LE G P ++ +N LMH + G+ A VF + L P +FN ++NG K
Sbjct: 125 EENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
+ R+ +Q G P++ TY++LI GLCK ++ A + E+ D G PN +T+
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A D +++M+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D +Y TLI+ CKEG LE A+ M K+ D +T LI GLC+ G
Sbjct: 305 KGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K G + + + M+
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 142/257 (55%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + + + G+ P VV++N+L+ G + L+ L + M G+ PDV++Y+ L++ L
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGL 216
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ K D+AN +F +M+ L P TF +++G CKN D A+ +++ + P+L
Sbjct: 217 CKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+TYN LI GLCK G L+ A+ ++ E+ G P+ TYTT++ + + E
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKR 336
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M ++ D Y +I+ + GR +A + +M++ G++ +I +Y +IN +CK+G
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396
Query: 257 LEAAYLLLDEMEKQGFE 273
+ LL EM++ G++
Sbjct: 397 VWTGSKLLKEMQRDGYK 413
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 149/288 (51%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + G+ P V S+N+LM+ +LG +
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M + P T+++++NGLCK D+A +F + G VP VT+ LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I K++ +P+ ITY T++ + K +++ M KG
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D F Y T+I K G L+ A +Y ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
L EM G + + T+T++I+ CK G++ L+ M + G+ ++
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSV 416
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 142/309 (45%), Gaps = 4/309 (1%)
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
G L F+ ++ ++ + +A+ +R ++H F T +++ L K +
Sbjct: 60 GTLRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKL 119
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
+E + G+ + + +M + + +L + A+ + G + T++
Sbjct: 120 VWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMN 179
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
++K+G L E M GVQ D+ +Y+ LIN CKE K++ A +L DEM +G
Sbjct: 180 GYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVP 239
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
+ T T LIDG CK G + A + M +L YN ++ L K G + A ++
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299
Query: 335 ESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
+ M +K D FTY++++ CK L +A + +K +R+ A A++ GL
Sbjct: 300 DEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 391 GCRREAKKI 399
G +A+K+
Sbjct: 360 GRSVDAEKM 368
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 101/202 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ D + + M + G+ P+ VT+ +LI G +N + ++++ +ML
Sbjct: 211 VLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+ +YN+L++ L + G +A + +MI L P T+ +++G CK + A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETA 330
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K + V Y LI GLC+ GR A +L+E+ G P TYT I+
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 181 CFRNRKYKLGLEILSAMKRKGY 202
+ G ++L M+R GY
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGY 412
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 92/172 (53%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ D I +M +SPD++TYN+LI G + L + DL+DEM+ G
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD ++Y +L+ + G + A + MI ++ + +++GLC+ + +A
Sbjct: 307 LKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+M R + G PE+ TY ++I CK G + T +LKE+ G+ P+ +T
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418
>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 153/318 (48%)
Query: 8 QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 67
F + D + NR+ P +V + L+ + S L L +M G+PP+V+
Sbjct: 22 HFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVY 81
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+ N L++ L + A V ++ P TF ++ GLC AL +F +
Sbjct: 82 TLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKM 141
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
GF P +VTY LI GLCK G A +L+ + P+ + YT+I+ ++R+
Sbjct: 142 IDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQV 201
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
+ S M +G + D F Y +++ A + K T + QMV + D+V ++T+
Sbjct: 202 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 261
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
++ CKEGK+ A+ ++D M ++G E D T+T L+DG C + A + M + GF
Sbjct: 262 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 321
Query: 308 DSNLEAYNCIVDRLGKDG 325
++ +Y +++ KDG
Sbjct: 322 APDVISYTTLINAGKKDG 339
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 173/370 (46%), Gaps = 34/370 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ + + + ++ +M G+ P+V T N LI + + + +L ++L++G
Sbjct: 51 LLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLG 110
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD ++ +L+ L GK EA +F MI P T+ ++NGLCK T A+
Sbjct: 111 HQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAI 170
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ R +++ P++V Y +I LCK ++ A + ++ G +P+ TYT+++
Sbjct: 171 RLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHAL 230
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++K +L+ M D + TV+ A K G++ EA + ++ M+ GV+ D+
Sbjct: 231 CNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDV 290
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN---------- 291
V+Y TL++ +C + +++ A + D M ++GF D ++T LI+ K G
Sbjct: 291 VTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGLVSLQEVIG 350
Query: 292 --------IKG----------------ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
+KG R L M N+ ++ +VD L K+GK+
Sbjct: 351 LVKETPDAVKGGAVEVIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKV 410
Query: 328 DHAINVFESM 337
A +V + M
Sbjct: 411 MEAHDVVDMM 420
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 161/372 (43%), Gaps = 53/372 (14%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+++C +++L ++ + G PD T+ +LI G + +L L D+M++
Sbjct: 85 ILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDE 144
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V +Y +L++ L ++G A R+ + M G+ P + +++ LCK+R A
Sbjct: 145 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEA 204
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G P++ TY L+ LC + +L ++ +S P+ + ++T++
Sbjct: 205 FNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDA 264
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K EI+ M ++G D Y T++ + EA + MV G D
Sbjct: 265 LCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPD 324
Query: 241 IVSYNTLINLYCKEGK----------------------------------LEAAYLLLDE 266
++SY TLIN K+G E LL+E
Sbjct: 325 VISYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFEKGRTLLNE 384
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M + + ++D LCK G + +EA++ +VD + K G
Sbjct: 385 MVNSKIMPNVVIFSTVVDALCKEGKV------------------MEAHD-VVDMMIKRGV 425
Query: 327 IDHAINVFESME 338
+A+ VF++M+
Sbjct: 426 EPNAVKVFDTMK 437
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 135/320 (42%), Gaps = 4/320 (1%)
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
ML +P S N+ D+A F ++ P F +L + K ++
Sbjct: 1 MLSPPLPFFSSSQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKH 60
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
L + + G P + T NILI C R+ A +L ++ GH P+ T+TT
Sbjct: 61 YSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTT 120
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
+++ K L + M +G+ + Y T+I K+G A + M
Sbjct: 121 LIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN 180
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
Q D+V Y ++I+ CK+ ++ A+ L +M QG D +T+T L+ LC K
Sbjct: 181 CQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVT 240
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
L M ++ ++ +VD L K+GK+ A + + M + D TY++++
Sbjct: 241 TLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGH 300
Query: 353 CKAKRLPSASKLLLSCLKSG 372
C + A K+ ++ G
Sbjct: 301 CLQSEMDEAVKVFDMMVRKG 320
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 118/274 (43%), Gaps = 6/274 (2%)
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
D+AL F L P +V + L+ + K T + ++ G PN T +
Sbjct: 27 DDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNIL 86
Query: 178 MKC-CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
+ C NR +L+ + + G+ D + T+I G++ EA ++M+ +G
Sbjct: 87 INSFCHLNR-VGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 145
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
Q ++V+Y TLIN CK G AA LL ME+ + D +T +ID LCK + A
Sbjct: 146 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 205
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNL 352
M G ++ Y +V L + H + M + D +S++V L
Sbjct: 206 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 265
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
CK ++ A +++ ++ GV ++DG
Sbjct: 266 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDG 299
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 99/219 (45%), Gaps = 38/219 (17%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A C + T+LN+M + I PDVV +++++ + ++ + +++D M++ G
Sbjct: 226 LVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRG 285
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN----- 114
+ PDV +Y +LM HCL + DEA +VF M+ P ++ ++N K+
Sbjct: 286 VEPDVVTYTTLMDGHCL--QSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGLV 343
Query: 115 ---------RYTDNALR--------------------MFRGLQKHGFVPELVTYNILIKG 145
+ T +A++ + + +P +V ++ ++
Sbjct: 344 SLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDA 403
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
LCK G++ A ++ + G PNA+ MKC +N
Sbjct: 404 LCKEGKVMEAHDVVDMMIKRGVEPNAVKVFDTMKCVEKN 442
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 142/283 (50%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
E+LE G P ++ +N LMH + G+ A VF ++ L P +FN ++NG +
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLG 185
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D R+ + G P++ TY++LI GLCK ++ A + E+ +G PN +T+T
Sbjct: 186 DLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFT 245
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T++ + L +E M R+G++ D Y T+I K G LK+A D +++M
Sbjct: 246 TLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMK 305
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G++ D ++Y TLI+ CKEG LE A+ M K+ D +T LI GLC+ G GA
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGA 365
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
L M +G + Y I++ K G + + + M+
Sbjct: 366 EKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQ 408
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 156/306 (50%), Gaps = 35/306 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV++N+L+ G R L L M
Sbjct: 141 ILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGS 200
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PDV++Y+ L++ L + K ++AN +F +MI L P TF +++G CK D A
Sbjct: 201 GIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLA 260
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++ + + GF P+L+TYN LI GLCK G L+ A+ ++ E+ G P+ ITYTT++
Sbjct: 261 MEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLID- 319
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
G C K G L+ A Y ++M+ + ++LD
Sbjct: 320 ---------------------------GSC-------KEGDLETAFKYKKRMIKENIRLD 345
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+Y LI+ C+EG+ A +L EM G + D T+T++I+ CK G++K L+
Sbjct: 346 DVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLK 405
Query: 301 YMNKIG 306
M + G
Sbjct: 406 EMQRDG 411
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 146/301 (48%), Gaps = 8/301 (2%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L K +Y + ++ + + G+ L +NIL+ CK G +R A+ + E+ G
Sbjct: 107 VLEHFMKLKYFKSVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWG 166
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ +++ T+M R G + SAM G D + Y +I K ++ +A
Sbjct: 167 LRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDAN 226
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ +G+ + V++ TLI+ +CK G ++ A EM +QGF D T+ LI GL
Sbjct: 227 ELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGL 286
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K A+ ++ M+ G + Y ++D K+G ++ A + M + D
Sbjct: 287 CKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDD 346
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 402
Y++++ LC+ + A K+L L G++ +++ C++ K+ SK
Sbjct: 347 VAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIINEF----CKKGDVKMGSK 402
Query: 403 I 403
+
Sbjct: 403 L 403
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 87/172 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ S D M G SPD++TYN+LI G + L + DL+DEM G
Sbjct: 247 LIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y +L+ + G + A + + MI ++ + +++GLC+ + A
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAE 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+M R + G P+ TY ++I CK G ++ +LKE+ GH P +T
Sbjct: 367 KMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVPCVVT 418
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 101/202 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ + + + M G+ P+ VT+ +LI G + + +++ EML
Sbjct: 211 VLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQ 270
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN+L++ L + G +A + +M L P T+ +++G CK + A
Sbjct: 271 GFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETA 330
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + K + V Y LI GLC+ G+ A +L+E+ G P+ TYT I+
Sbjct: 331 FKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIINE 390
Query: 181 CFRNRKYKLGLEILSAMKRKGY 202
+ K+G ++L M+R G+
Sbjct: 391 FCKKGDVKMGSKLLKEMQRDGH 412
>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
Length = 1013
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 185/403 (45%), Gaps = 4/403 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDA C+ + D +L M E ISP+VVT++S+I G + LL + + M E
Sbjct: 384 VLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKER 443
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+V +Y +L+ F+ D A V+ DM+C + + ++NGL +N + A
Sbjct: 444 GINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEA 503
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +F+ G + V Y LI GL KAG + TA +EL D P+A+ Y + C
Sbjct: 504 MALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINC 563
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K+K L+ M+ G D Y T+I + + G +A + +M ++ +
Sbjct: 564 LCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPN 623
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++YNTL+ G +E A LL+EM GF TH ++ ++ + E
Sbjct: 624 LITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHE 683
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+M G +++ YN ++ L G A V E M D+ T+++++ CK+
Sbjct: 684 WMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSS 743
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
L +A L + + ++ GL G EA +
Sbjct: 744 HLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTV 786
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 186/395 (47%), Gaps = 7/395 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISP-DVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L+ C+ DA + +R GI DV+ +N+LIAG R +L + D M
Sbjct: 141 LLAGLCRNGQVDAAAALADR--GGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQ 198
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+P DV YN+L+ + G+ D A V M + P AT+ + C+ + + A
Sbjct: 199 GLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEA 258
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ G+ ++G + ++VT + L+ GLC+ GR A + +E+ G APN +TY T++
Sbjct: 259 FDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDS 318
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + K L +L M +G D Y ++ K G+ E D + ++D + +
Sbjct: 319 LAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPN 378
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+Y LI+ CK ++ A +L EME++ + T + +I+G K G + A +
Sbjct: 379 GVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKR 438
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + G + N+ Y ++D K D A+ V+ M + + F S+V+ L +
Sbjct: 439 MMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNG 498
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
++ A L SG+ + ++DGL +G
Sbjct: 499 KIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAG 533
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 172/366 (46%), Gaps = 4/366 (1%)
Query: 25 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 84
+G+S D V Y +LI G + + + E+++ + PD YN ++CL LGK E
Sbjct: 513 SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKE 572
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
A +M L P +T+N M+ C+ T AL++ ++ P L+TYN L+
Sbjct: 573 AKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVA 632
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
GL G + A+++L E+ +G +P+++T+ +++ C ++R+ + L+I M G
Sbjct: 633 GLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHA 692
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D Y T++ G ++AT +E+M+ G+ D +++N LI +CK L+ A+
Sbjct: 693 DITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATY 752
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+M Q + T L+ GL G I A L M K G + N Y+ + GK
Sbjct: 753 AQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQ 812
Query: 325 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
A+ ++ M V TY++++ + KA + A +L K GV
Sbjct: 813 SNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTY 872
Query: 381 KAVVDG 386
+V G
Sbjct: 873 DILVSG 878
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/483 (25%), Positives = 199/483 (41%), Gaps = 76/483 (15%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI YC+ A ++ +RM G+ DVV YN+L+AG R + + +LD M E G
Sbjct: 175 LIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAG 234
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V +Y + + +EA +++ M+ + T + ++ GLC++ A
Sbjct: 235 VDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAY 294
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGR-------------------LRTARWILKEL 162
+FR + K G P VTY LI L KAGR L T ++ L
Sbjct: 295 ALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWL 354
Query: 163 GDSGH----------------APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
G G +PN +TYT ++ + ++L M+ K + +
Sbjct: 355 GKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNV 414
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK------------- 253
+ +VI FVK G L +AT+Y M G+ ++V+Y TLI+ + K
Sbjct: 415 VTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHD 474
Query: 254 ----------------------EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
GK+E A L + G D +T LIDGL KAG+
Sbjct: 475 MLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGD 534
Query: 292 IKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 346
+ A + E M++ + YN ++ L GK A + M D TY+
Sbjct: 535 MPTAFKFGQELMDR-NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYN 593
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
+M+ + C+ A KLL S ++ +V GL +G +AK + +++ A
Sbjct: 594 TMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSA 653
Query: 407 KIS 409
S
Sbjct: 654 GFS 656
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 160/384 (41%), Gaps = 36/384 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ F Y + M + G +P+ VTY +LI + L LL EM+ G
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D+ +Y +LM L + GK DE + + +L+P T+ ++++ LCK D A
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAE 399
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ +++ P +VT++ +I G K G L A + + + G PN +TY T++
Sbjct: 400 QVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGF 459
Query: 182 FRNRKYKLGLEILSAM-----------------------------------KRKGYTFDG 206
F+ + LE+ M G + D
Sbjct: 460 FKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDH 519
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T+I K G + A + ++++ + D V YN IN C GK + A L E
Sbjct: 520 VNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTE 579
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M G + D+ T+ +I C+ G A L M NL YN +V L G
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGA 639
Query: 327 IDHAINVFESMEVKDSFTYSSMVH 350
++ A + M V F+ SS+ H
Sbjct: 640 VEKAKYLLNEM-VSAGFSPSSLTH 662
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 87/161 (54%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L M +GI+PD +T+N+LI G ++S L + +ML I P++ ++N+L+ L
Sbjct: 716 VLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLE 775
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+G+ EA V +M L P T++I+ G K A+R++ + GFVP++
Sbjct: 776 SVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVS 835
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
TYN LI KAG + A+ + K++ G P + TY ++
Sbjct: 836 TYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILV 876
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 80/210 (38%), Gaps = 38/210 (18%)
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL-------------------- 263
A + +M GV D V+ NTL+ C+ G+++AA L
Sbjct: 118 HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIA 177
Query: 264 --------------LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
D M QG D + L+ G C+AG + AR L+ M + G D
Sbjct: 178 GYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDP 237
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 365
N+ Y + + ++ A +++E M + D T S++V LC+ R A L
Sbjct: 238 NVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALF 297
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
K G ++D L +G +E
Sbjct: 298 REMDKVGAAPNHVTYCTLIDSLAKAGRGKE 327
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
T+L M ++G+ P+ +TY+ L G + S ++ L EM+ G P V +YN+L+
Sbjct: 785 TVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDF 844
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 110
+ G +A +F+DM + P + T++I+++G
Sbjct: 845 TKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878
>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
rugosa]
Length = 414
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 148/285 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV+YN+L+ G R L L ML
Sbjct: 130 ILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 189
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ + K D+AN +F +M+ L P F +++G CKN D A
Sbjct: 190 GVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLA 249
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + P+L+TYN LI GLCK G L+ A ++ E+ G P+ ITYTT++
Sbjct: 250 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDG 309
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + E M ++ D Y +I+ GR +A + +M++ G++ D
Sbjct: 310 CCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPD 369
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y +IN +CK+G + LL EM++ G T+ +L++G
Sbjct: 370 ARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 155/309 (50%), Gaps = 2/309 (0%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ ++ + + + D + + G+ P V SYN+
Sbjct: 106 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNT 165
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M+ + P T+++++NG CK D+A +F + G
Sbjct: 166 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKG 225
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP V + LI G CK GR+ A I K++ +P+ ITY T++ + K
Sbjct: 226 LVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAH 285
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
++ M KG D Y T+I K G L A ++ ++M+ + +LD V Y LI+
Sbjct: 286 HLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGL 345
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 310
C EG+ A +L EM G + D T+T++I+ CK G++ KG++L L+ M + G +
Sbjct: 346 CXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKL-LKEMQRDGHVPS 404
Query: 311 LEAYNCIVD 319
+ YN +++
Sbjct: 405 VVTYNVLMN 413
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 143/298 (47%), Gaps = 1/298 (0%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E+LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 114 EEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 173
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ + G P++ TY++LI G CK + A + E+ G PN + +
Sbjct: 174 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXF 233
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A +++M
Sbjct: 234 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSX 293
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG L++A+ M ++ D+ +T LI GLC G
Sbjct: 294 KGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVD 353
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
A L M +G + Y I++ K G + + + M+ +D S + +N+
Sbjct: 354 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ-RDGHVPSVVTYNV 410
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 127/272 (46%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y + + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 96 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWG 155
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ ++Y T+M R G + SAM G D + Y +I K + +A
Sbjct: 156 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDAN 215
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ + V + TLI+ +CK G+++ A + +M Q D T+ LI GL
Sbjct: 216 ELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 275
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K A ++ M+ G + Y ++D K+G +D A + M + D
Sbjct: 276 CKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDE 335
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC R A K+L L G++
Sbjct: 336 VXYTALISGLCXEGRSVDAEKMLREMLSVGLK 367
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 135/301 (44%), Gaps = 4/301 (1%)
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
F+ ++ ++ + +A+ +R +H F T +++ L K + +E+
Sbjct: 57 VFSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEI 116
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
+ G+ + + +M ++ +J + A+ + G Y T++ ++++G L
Sbjct: 117 LECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 176
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
E M+ GVQ D+ +Y+ LIN CKE K + A L DEM +G + T L
Sbjct: 177 DEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTL 236
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 340
IDG CK G + A + M +L YN ++ L K G + A ++ + M K
Sbjct: 237 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGL 296
Query: 341 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
D TY++++ CK L SA + ++ R+ + A++ GL G +A+K
Sbjct: 297 KPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEK 356
Query: 399 I 399
+
Sbjct: 357 M 357
>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
macropoda]
Length = 412
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 149/285 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV+YN+L+ G R L L ML
Sbjct: 128 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 187
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN +F +M+ L P TF +++G CKN D A
Sbjct: 188 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 247
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + P+L+TYN LI GLCK G L+ A ++ E+ P+ ITYTT++
Sbjct: 248 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDG 307
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + E M ++ D Y +I+ + GR +A + +M+ G++ D
Sbjct: 308 CCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPD 367
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y +IN +CK+G + LL EM++ G T+ +L++G
Sbjct: 368 SRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 412
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 159/309 (51%), Gaps = 2/309 (0%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ ++ + + + D + + G+ P V SYN+
Sbjct: 104 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 163
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M+ + P T+++++NGLCK D+A +F + G
Sbjct: 164 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 223
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP VT+ LI G CK GR+ A I K++ +P+ ITY T++ + K
Sbjct: 224 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAH 283
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
++ M K D Y T+I K G L A ++ ++M+ + ++LD V+Y LI+
Sbjct: 284 HLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGL 343
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 310
C+EG+ A +L EM G + D T+T++I+ CK G++ KG++L L+ M + G +
Sbjct: 344 CQEGRSVDAEKMLREMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKL-LKEMQRDGHVPS 402
Query: 311 LEAYNCIVD 319
+ YN +++
Sbjct: 403 VVTYNVLMN 411
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 146/298 (48%), Gaps = 1/298 (0%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E+LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 112 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 171
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ + G P++ TY++LI GLCK ++ A + E+ G PN +T+
Sbjct: 172 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 231
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A +++M
Sbjct: 232 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSM 291
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
++ D ++Y TLI+ CKEG L++A+ M ++ D+ +T LI GLC+ G
Sbjct: 292 KELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVD 351
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
A L M +G + Y I++ K G + + + M+ +D S + +N+
Sbjct: 352 AEKMLREMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQ-RDGHVPSVVTYNV 408
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 139/273 (50%), Gaps = 4/273 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
FNI+++ CK+ A +F + K G P +V+YN L+ G + G L + +
Sbjct: 126 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 185
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
SG P+ TY+ ++ + K E+ M KG +G + T+I K GR+
Sbjct: 186 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 245
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A + +QM++ + D+++YNTLI CK+G L+ A+ L+DEM + + DK T+T LI
Sbjct: 246 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLI 305
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK-IDHAINVFESMEV--- 339
DG CK G++ A H + M + + AY ++ L ++G+ +D + E + V
Sbjct: 306 DGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLK 365
Query: 340 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
DS TY+ +++ CK + SKLL + G
Sbjct: 366 PDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDG 398
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 129/272 (47%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y + + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 94 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 153
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ ++Y T+M R G + SAM G D + Y +I K ++ +A
Sbjct: 154 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 213
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ + V++ TLI+ +CK G+++ A + +M Q D T+ LI GL
Sbjct: 214 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 273
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K A ++ M+ + Y ++D K+G +D A + M + D
Sbjct: 274 CKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDE 333
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 334 VAYTALISGLCQEGRSVDAEKMLREMLNVGLK 365
>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 450
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 161/331 (48%), Gaps = 5/331 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID +C F + +L M E I+PDV+T+N+LI+ + + L + L DEML
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD +YNS+++ + + D+A +F M +P TFN +++ C+ + D +
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGM 236
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ R + + G V TYN LI G C+ L A+ + +E+ G P+ IT ++
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N K + LE+ ++ D Y +I K ++ EA D + GV+ D+
Sbjct: 297 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 356
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN +I+ +C + + A +L +M+ G E D T+ LI G KAG I + +
Sbjct: 357 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 416
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
M GF + + D L DG++D + +
Sbjct: 417 MRSNGFSGDAFTIKMVAD-LITDGRLDKSFS 446
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 181/368 (49%), Gaps = 8/368 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ + +L++M E I PDVV Y+++I ++ S + L EMLE G
Sbjct: 51 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 110
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V++YN ++ G+ +A R+ +DMI ++ P TFN +++ K A
Sbjct: 111 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 170
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + P+ VTYN +I G CK R A K + D +P+ +T+ TI+
Sbjct: 171 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVY 226
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R ++ G+++L + R+G + Y T+I F ++ L A D ++M++ GV D
Sbjct: 227 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 286
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++ N L+ +C+ KLE A L + ++ + D + I+I G+CK + A
Sbjct: 287 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 346
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G + +++ YN ++ I A +F M+ D+ TY++++ KA
Sbjct: 347 LPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGE 406
Query: 358 LPSASKLL 365
+ + +L+
Sbjct: 407 IDKSIELI 414
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 180/370 (48%), Gaps = 8/370 (2%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M E G++P V+T+N+LI G + + L+++M+ G+ DV +Y ++++ + ++G
Sbjct: 1 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
A + M + P ++ +++ LCK+ + +A +F + + G P + TYN
Sbjct: 61 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
+I G C GR A+ +L+++ + P+ +T+ ++ + K ++ M +
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
D Y ++I F K R +A + M + D+V++NT+I++YC+ +++
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGM 236
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
LL E+ ++G + T+ LI G C+ N+ A+ + M G + N ++
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
++ K++ A+ +FE +++ D+ Y+ ++H +CK ++ A L S GV
Sbjct: 297 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 356
Query: 378 SAQKAVVDGL 387
++ G
Sbjct: 357 QTYNVMISGF 366
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 145/316 (45%), Gaps = 8/316 (2%)
Query: 97 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 156
LTP TFN ++NGLC A + + G ++VTY ++ G+CK G ++A
Sbjct: 6 LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 65
Query: 157 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 216
+L ++ ++ P+ + Y+ I+ ++ + + S M KG + F Y +I F
Sbjct: 66 NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 125
Query: 217 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
GR +A + M+ + D++++N LI+ KEGKL A L DEM + D
Sbjct: 126 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 185
Query: 277 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
T+ +I G CK A+ + M ++ +N I+D + ++D + +
Sbjct: 186 VTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLRE 241
Query: 337 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 392
+ V ++ TY++++H C+ L +A L + GV ++ G +
Sbjct: 242 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 301
Query: 393 RREAKKIQSKIRMAKI 408
EA ++ I+M+KI
Sbjct: 302 LEEALELFEVIQMSKI 317
>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 452
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 155/295 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ A +L + + P+VV Y+++I ++ L+ + DL +ML
Sbjct: 90 LIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKR 149
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV +YN+LM+ +G+ EA +F M+ ++ P TFNI+++GLCK A
Sbjct: 150 ISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKAR 209
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K P+++TYN L+ G + A ++ + G P+ +Y+ ++
Sbjct: 210 NVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGL 269
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + +L M K + Y ++I K GR+ +A D + +M G D+
Sbjct: 270 CKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADV 329
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
++YN+L++ CK +++ A LL +++ QG + D YT+TIL+DGLCK G +K A+
Sbjct: 330 ITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQ 384
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 136/269 (50%), Gaps = 14/269 (5%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ N+M I PD+ T+N L+ G + + + ++L M++ + PDV +YNSLM F
Sbjct: 176 LFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYF 235
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ + ++A VF M +TP ++++M+NGLCK + D A+ + + + P V
Sbjct: 236 LVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTV 295
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY+ LI GL K+GR+ A ++ E+ + G + ITY +++ +N + + +L+ +
Sbjct: 296 TYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKI 355
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K +G D + Y ++ K GRLK+A + + ++ G LD +
Sbjct: 356 KDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSL--------------F 401
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ A LL +ME G + T ILI L
Sbjct: 402 DKALSLLSKMEDNGCTPNPVTFEILIRAL 430
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 178/382 (46%), Gaps = 10/382 (2%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG------K 81
+P + + + A + + + L +M GI D+ + N L++C LG K
Sbjct: 5 TPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDK 64
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
E D+I ++ +++GLCK T A+++ R + P +V Y+
Sbjct: 65 VKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYST 124
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
+I LCK + A + ++ +P+ ITY T+M C + K + + + M K
Sbjct: 125 IIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKN 184
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
D + + ++ K G +K+A + + M+ V D+++YN+L++ Y + A
Sbjct: 185 IKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKAT 244
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+ + M ++G D ++++++I+GLCK + A L+ M+ N Y+ ++D L
Sbjct: 245 FVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGL 304
Query: 322 GKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
K G+I A ++ M + D TY+S++ LCK ++ A LL G++
Sbjct: 305 HKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDI 364
Query: 378 SAQKAVVDGLRHSGCRREAKKI 399
+VDGL +G ++A+++
Sbjct: 365 YTYTILVDGLCKNGRLKDAQEV 386
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 139/261 (53%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
+ + ++M ISPDV+TYN+L+ G L ++ L ++ML I PD++++N L+
Sbjct: 138 AFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVD 197
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
L + G+ +A V MI + P T+N +++G + + A +F + + G P
Sbjct: 198 GLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTP 257
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
++ +Y+++I GLCK + A +LKE+ APN +TY++++ ++ + +++
Sbjct: 258 DVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLV 317
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
+ M +G D Y +++ A K ++ +A + ++ G+Q DI +Y L++ CK
Sbjct: 318 NEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKN 377
Query: 255 GKLEAAYLLLDEMEKQGFECD 275
G+L+ A + + +G+ D
Sbjct: 378 GRLKDAQEVYQILLIKGYHLD 398
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 191/414 (46%), Gaps = 15/414 (3%)
Query: 6 YCQFVSFDAGYTIL---NRMREAGISPDVVTYNSLI------AGATRNSLLSCSLDLLDE 56
+ V + +T++ ++M GI D+V N L+ N + +L D+
Sbjct: 15 FASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKVKETLHFHDD 74
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
++ G + SY +L+ L + G+ A +V +++ + P ++ ++ LCK++
Sbjct: 75 VIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKL 134
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
+A ++ + P+++TYN L+ G GRL+ A + ++ P+ T+
Sbjct: 135 VIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNI 194
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ + + K +L+ M ++ D Y +++ + + + +AT M G
Sbjct: 195 LVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRG 254
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
V D+ SY+ +IN CK ++ A LL EM + + T++ LIDGL K+G I A
Sbjct: 255 VTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAW 314
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
+ M+ G +++ YN ++D L K+ ++D AI + ++ + D +TY+ +V L
Sbjct: 315 DLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGL 374
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKA--VVDGLRHSGCRREAKKIQSKIR 404
CK RL A ++ L G + KA ++ + +GC + IR
Sbjct: 375 CKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIR 428
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 125/272 (45%), Gaps = 14/272 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ +L M + + PDV+TYNSL+ G + + + + M
Sbjct: 194 ILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARR 253
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV SY+ +++ L + DEA + ++M + P T T++ +++GL K+ +A
Sbjct: 254 GVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDA 313
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G +++TYN L+ LCK ++ A +L ++ D G P+ TYT ++
Sbjct: 314 WDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDG 373
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+N + K E+ + KGY D +A + +M +G +
Sbjct: 374 LCKNGRLKDAQEVYQILLIKGYHLDSL--------------FDKALSLLSKMEDNGCTPN 419
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
V++ LI + + A LL EM +G
Sbjct: 420 PVTFEILIRALFENDMNDKAVELLREMIARGL 451
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 22/143 (15%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
FDA + ++N M G DV+TYNSL+ +N + ++ LL ++ + GI PD+++Y
Sbjct: 311 FDA-WDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTI 369
Query: 72 LMHCLFQLGKPDEANRVFQDMIC---------------------GDLTPCTATFNIMLNG 110
L+ L + G+ +A V+Q ++ TP TF I++
Sbjct: 370 LVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRA 429
Query: 111 LCKNRYTDNALRMFRGLQKHGFV 133
L +N D A+ + R + G +
Sbjct: 430 LFENDMNDKAVELLREMIARGLL 452
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 179/365 (49%), Gaps = 4/365 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D + F + + E+ P Y I A + S + L+L + M
Sbjct: 522 LLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHD 581
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P V+ YN L+ L ++ + +A ++F +M+ L P T+N +++G CK+ + +
Sbjct: 582 RISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKS 641
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ ++ P L+T+N L+KGL KAG + A +L E+ D G P+A T++ +
Sbjct: 642 FKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDG 701
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
N K L + G + + ++ A K G++++A + + + + G+ +
Sbjct: 702 YSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPN 761
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V YNT+I+ Y ++G L A + +D MEKQG + D + LI C+ G+++ A +
Sbjct: 762 EVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVN 821
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M G ++E YN ++ G+ + D ++ + ME + + +Y ++++ LCK
Sbjct: 822 KMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGS 881
Query: 357 RLPSA 361
+L A
Sbjct: 882 KLLEA 886
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 173/362 (47%), Gaps = 8/362 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++A C+ + IL R G+ P+ V YN++I G +R L + +D M +
Sbjct: 732 ILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQ 791
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD +YN L+ +LG + A + M ++P T+NI++ G + D
Sbjct: 792 GMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 851
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + ++ +G +P +V+Y LI LCK +L A+ + +++ D G +PN Y ++
Sbjct: 852 FDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDG 911
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C K + M +KG + Y T+I G+L EA D + ++ G++ D
Sbjct: 912 CCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPD 971
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +YN+LI+ Y G ++ L +EM+ G + T+ +LI LC +G L +
Sbjct: 972 VFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLI-SLCTK---EGIELTKK 1027
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
++ +L YN ++ G +D A N+ + M K D TY+S++ K
Sbjct: 1028 IFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVG 1087
Query: 357 RL 358
+L
Sbjct: 1088 KL 1089
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 178/402 (44%), Gaps = 38/402 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ + + + + RM+ I P ++T+N+L+ G + ++ + ++L EM + G
Sbjct: 628 LIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQG 687
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA- 120
PD ++++ L K D A V++ + L T +I+LN LCK + A
Sbjct: 688 FVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAE 747
Query: 121 ----LRMFRGL------------------------------QKHGFVPELVTYNILIKGL 146
M +GL +K G P+ + YN LI+
Sbjct: 748 EILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTF 807
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C+ G + A + ++ G +P+ TY ++ R ++ ++L M+ G +
Sbjct: 808 CELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNV 867
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T+I K +L EA M GV ++ YN LI+ C +GK+E A+ +E
Sbjct: 868 VSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEE 927
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M K+G E + T+ LIDGL G + A L +++ G ++ YN ++ G
Sbjct: 928 MFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGN 987
Query: 327 IDHAINVFESME---VKDSFTYSSMVHNLCKAKRLPSASKLL 365
+ I ++E M+ +K + ++ +LC + + K+
Sbjct: 988 VQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIF 1029
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 166/367 (45%), Gaps = 31/367 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ + +N+M+ G+SP V TYN LI G R DLL EM + G
Sbjct: 803 LIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNG 862
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V SY +L++CL + K EA V +DM ++P +N++++G C ++A
Sbjct: 863 TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAF 922
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R + K G LVTYN LI GL G+L A +L E+ G P+ TY +++
Sbjct: 923 RFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGY 982
Query: 182 FRNRKYKLGLEILSAMKRKGY--------------TFDG-------FG----------YC 210
+ + + MK G T +G FG Y
Sbjct: 983 RFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGEMSLQPDLLVYN 1042
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
V+ + G + +A + +QM+ + LD +YN+LI K GKL L+DEM+ +
Sbjct: 1043 GVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAR 1102
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
E + T+ I++ G C+ + GA + M + G ++ + +V L ++ + A
Sbjct: 1103 EMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEA 1162
Query: 331 INVFESM 337
NV M
Sbjct: 1163 ENVISEM 1169
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 170/419 (40%), Gaps = 39/419 (9%)
Query: 9 FVSFDAGYTILNRMREAGISPD--VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP-- 64
F F T++ R+R S V + + + L S S D E PP
Sbjct: 361 FAEFSGSSTMVTRLRLVSRSSRYATVKFTESFSASCSCRLFSASTDPESESQPAQAPPTN 420
Query: 65 ----DVWSYNSL--MHCLFQLGKPDEANRVFQDMICGDLTPCTAT--------------- 103
D + L + L Q + + A V ++ D P T+
Sbjct: 421 PVTGDEERHEKLRNLRVLLQQNRIETARGVLYSLLRSDSAPFTSPKELFSAFSLSSPSLK 480
Query: 104 -------FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 156
+++LN +++ A +F L+ G P + +L+ L K + R
Sbjct: 481 HDFSYLLLSVLLN---ESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTI 537
Query: 157 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 216
+ + +S P+ Y ++ + GLE+ + MK + F Y +I
Sbjct: 538 NVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGL 597
Query: 217 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
K+ ++K+A ++M+ + +++YNTLI+ YCK+G E ++ + + M+ E
Sbjct: 598 CKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSL 657
Query: 277 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
T L+ GL KAG ++ A L M GF + ++ + D + K D A+ V+E+
Sbjct: 658 ITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYET 717
Query: 337 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+++T S +++ LCK ++ A ++L + G+ + ++DG G
Sbjct: 718 AVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKG 776
>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Vitis vinifera]
Length = 835
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 194/389 (49%), Gaps = 4/389 (1%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
LN + I V +N LI G RN +S +++LL+ M G PD+ +YN+LM+ +
Sbjct: 5 LNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCK 64
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
+G A ++ ++ +L P T+ +++ CK++ ++AL M+ + VP++VT
Sbjct: 65 IGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVT 124
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
Y ++ GLCK+G++ A+ + +E+ + G PN +Y T++ F+ + M
Sbjct: 125 YTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMV 184
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
+G FD Y ++ K G A D + ++ + + + V+Y+ LI+ +CK G +
Sbjct: 185 VRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVN 244
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
LLL EME++ + ++ ++DG K G + A + M + N+ Y ++
Sbjct: 245 KGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLI 304
Query: 319 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
D K + A+++F+ M+ + ++F S V+NL ++ R+ A +L + G+
Sbjct: 305 DGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLL 364
Query: 375 ILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ +++DG +G +A I ++
Sbjct: 365 PDRVNYTSMMDGFFKAGKESDAFNIAQEM 393
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 174/356 (48%), Gaps = 5/356 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M G+ PD V Y S++ G + S + ++ EM E DV +YN L++ LF+LGK
Sbjct: 358 MMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK 417
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
E+ M L P +ATFN M+N CK NAL++ ++ +G P +T NI
Sbjct: 418 Y-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNI 476
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
L++ LC AG + +L ++ G P T+ ++ ++R+ + L + + G
Sbjct: 477 LVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMG 536
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
D Y T+I+ F ++G ++ AT + M+ G+ DI++YN LI+ YC L+ A+
Sbjct: 537 VKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAF 596
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+ +M +G + T+ IL+ GL A IK A + M + G N Y+ +V
Sbjct: 597 AVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGH 656
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
GK G + + ++ M K + TY+ ++ K K++ A +L+ G+
Sbjct: 657 GKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGI 712
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 196/408 (48%), Gaps = 7/408 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ + G +L M E I P+V+ Y+S++ G T+ LL+ ++D++ +M++
Sbjct: 233 LIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRN 292
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V+ Y +L+ F+ + A +F++M L + +N L ++ + A
Sbjct: 293 ILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEAD 352
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ + G +P+ V Y ++ G KAG+ A I +E+ + + + Y ++
Sbjct: 353 ELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGL 412
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ KY+ + M++ G D + T+I A+ K G L A + +M + G++ +
Sbjct: 413 FKLGKYE-SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNS 471
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL-E 300
++ N L+ C G++E LL++M GF TH ++D K+ LH+ +
Sbjct: 472 ITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRAD-VILHMHD 530
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
+ +G +L YN ++ + G I A VF+ M K D TY++++H C +
Sbjct: 531 QLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISS 590
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
L A + L GV ++ GL + +EA + ++++
Sbjct: 591 HLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMK 638
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 188/397 (47%), Gaps = 7/397 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ + ++ M E G+ P+ +Y +LI + ++ + L M+ G
Sbjct: 128 IMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRG 187
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I DV Y +LM LF+ G + A +FQ ++ L P T++ +++G CK +
Sbjct: 188 IGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGE 247
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +++ P ++ Y+ ++ G K G L A +++++ PN Y T++
Sbjct: 248 LLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGY 307
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ + + L++ MK +G + F + + + GR++EA + + M++ G+ D
Sbjct: 308 FKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDR 367
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y ++++ + K GK A+ + EM ++ D + +LI+GL K G + H
Sbjct: 368 VNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTG- 426
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M ++G + +N +++ K+G + +A+ + M+ +S T + +V LC A
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
+ LL L G + KAV+D S RR
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDA--SSKSRR 521
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 177/401 (44%), Gaps = 39/401 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID YC+ +L M+ G +PD+VTYN+L+ G + L + L+ E+ +
Sbjct: 22 VLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLV 81
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P+V +Y +L+ + ++A ++ +M L P T+ ++NGLCK+ + A
Sbjct: 82 NLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEA 141
Query: 121 LRMFRGLQKHGFVP-----------------------------------ELVTYNILIKG 145
+FR +++ G VP ++V Y L+ G
Sbjct: 142 KSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDG 201
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
L KAG A + + L + PN +TY+ ++ + G +L M+ K +
Sbjct: 202 LFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPN 261
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y +++ + K G L EA D M +MV + ++ Y TLI+ Y K + A L
Sbjct: 262 VIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFK 321
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM+ +G E + + ++ L ++G ++ A + M G + Y ++D K G
Sbjct: 322 EMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAG 381
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 362
K A N+ + M K D Y+ +++ L K + S S
Sbjct: 382 KESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESES 422
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 156/349 (44%), Gaps = 41/349 (11%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
MR+ G++PD T+N++I + L +L LL+EM G+ P+ + N L+ L G+
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
++ + DM+ P T +L+ K+R D L M L G +L TYN
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNT 546
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
LI C+ G +R A + K++ G + ITY ++
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIH---------------------- 584
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
GYC LK+A QM+T+GV ++ +YN L+ ++ A
Sbjct: 585 ------GYCIS-------SHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAA 631
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG-ARLHLEYMNKIGFDSNLEAYNCIVDR 320
L+++M+++G + T+ IL+ G K GN+K +L+ E + K GF YN ++
Sbjct: 632 GLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITK-GFVPKTRTYNVLISC 690
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
K K+ A + + M+V+ +S TY ++ K + P +K L
Sbjct: 691 FAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSL 739
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 145/339 (42%), Gaps = 49/339 (14%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C + +LN M G P T+ +++ ++++ L + D+++ M
Sbjct: 476 ILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGM 535
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ D+ +YN+L+ +LG A VF+DM+ + T+N +++G C + + A
Sbjct: 536 GVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKA 595
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P + TYNIL+ GL A ++ A ++ ++ + G PNA TY ++
Sbjct: 596 FAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILV-- 653
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
G G KIG +KE +M+T G
Sbjct: 654 ------------------------SGHG---------KIGNMKECVKLYCEMITKGFVPK 680
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG-------------LC 287
+YN LI+ + K K+ A L+ EM+ +G + T+ ILI G L
Sbjct: 681 TRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLK 740
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
++ + RL E MN+ GF CI L K GK
Sbjct: 741 RSYQAEAKRL-FEEMNEKGFIPCENTLACISFTLAKPGK 778
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 12/129 (9%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
M G P TYN LI+ + +S + +L+ EM GIPP+ +Y+ L+ ++L
Sbjct: 671 EMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLS 730
Query: 81 K-PD-----------EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
K P+ EA R+F++M PC T + L K +A R+ L
Sbjct: 731 KQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLY 790
Query: 129 KHGFVPELV 137
K V EL+
Sbjct: 791 KKKTVQELL 799
>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 933
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 174/365 (47%), Gaps = 4/365 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDA C+ + D +L M E ISP+VVT++S+I G + LL + + M E
Sbjct: 384 VLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKER 443
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+V +Y +L+ F+ D A V+ DM+C + + ++NGL +N + A
Sbjct: 444 GINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEA 503
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +F+ G + V Y LI GL KAG + TA +EL D P+A+ Y + C
Sbjct: 504 MALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINC 563
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K+K L+ M+ G D Y T+I + + G +A + +M ++ +
Sbjct: 564 LCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPN 623
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++YNTL+ G +E A LL+EM GF TH ++ ++ + E
Sbjct: 624 LITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHE 683
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+M G +++ YN ++ L G A V E M D+ T+++++ CK+
Sbjct: 684 WMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSS 743
Query: 357 RLPSA 361
L +A
Sbjct: 744 HLDNA 748
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 186/395 (47%), Gaps = 7/395 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISP-DVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L+ C+ DA + +R GI DV+ +N+LIAG R +L + D M
Sbjct: 141 LLAGLCRNGQVDAAAALADR--GGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQ 198
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+P DV YN+L+ + G+ D A V M + P AT+ + C+ + + A
Sbjct: 199 GLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEA 258
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ G+ ++G + ++VT + L+ GLC+ GR A + +E+ G APN +TY T++
Sbjct: 259 FDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDS 318
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + K L +L M +G D Y ++ K G+ E D + ++D + +
Sbjct: 319 LAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPN 378
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+Y LI+ CK ++ A +L EME++ + T + +I+G K G + A +
Sbjct: 379 GVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKR 438
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + G + N+ Y ++D K D A+ V+ M + + F S+V+ L +
Sbjct: 439 MMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNG 498
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
++ A L SG+ + ++DGL +G
Sbjct: 499 KIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAG 533
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 180/385 (46%), Gaps = 11/385 (2%)
Query: 25 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 84
+G+S D V Y +LI G + + + E+++ + PD YN ++CL LGK E
Sbjct: 513 SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKE 572
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
A +M L P +T+N M+ C+ T AL++ ++ P L+TYN L+
Sbjct: 573 AKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVA 632
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
GL G + A+++L E+ +G +P+++T+ +++ C ++R+ + L+I M G
Sbjct: 633 GLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHA 692
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D Y T++ G ++AT +E+M+ G+ D +++N LI +CK L+ A+
Sbjct: 693 DITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATY 752
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+M Q + T L+ GL G I A L M K G + N Y+ + GK
Sbjct: 753 AQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQ 812
Query: 325 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR------ 374
A+ ++ M V TY++++ + KA + A +L K GV
Sbjct: 813 SNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTY 872
Query: 375 -ILKSAQKAVVDGLRHSGCRREAKK 398
IL S + +G C ++ K+
Sbjct: 873 DILVSGWSRIRNGTEVKKCLKDMKE 897
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/483 (25%), Positives = 199/483 (41%), Gaps = 76/483 (15%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI YC+ A ++ +RM G+ DVV YN+L+AG R + + +LD M E G
Sbjct: 175 LIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAG 234
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V +Y + + +EA +++ M+ + T + ++ GLC++ A
Sbjct: 235 VDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAY 294
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGR-------------------LRTARWILKEL 162
+FR + K G P VTY LI L KAGR L T ++ L
Sbjct: 295 ALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWL 354
Query: 163 GDSGH----------------APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
G G +PN +TYT ++ + ++L M+ K + +
Sbjct: 355 GKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNV 414
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK------------- 253
+ +VI FVK G L +AT+Y M G+ ++V+Y TLI+ + K
Sbjct: 415 VTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHD 474
Query: 254 ----------------------EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
GK+E A L + G D +T LIDGL KAG+
Sbjct: 475 MLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGD 534
Query: 292 IKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 346
+ A + E M++ + YN ++ L GK A + M D TY+
Sbjct: 535 MPTAFKFGQELMDR-NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYN 593
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
+M+ + C+ A KLL S ++ +V GL +G +AK + +++ A
Sbjct: 594 TMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSA 653
Query: 407 KIS 409
S
Sbjct: 654 GFS 656
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 160/384 (41%), Gaps = 36/384 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ F Y + M + G +P+ VTY +LI + L LL EM+ G
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D+ +Y +LM L + GK DE + + +L+P T+ ++++ LCK D A
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAE 399
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ +++ P +VT++ +I G K G L A + + + G PN +TY T++
Sbjct: 400 QVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGF 459
Query: 182 FRNRKYKLGLEILSAM-----------------------------------KRKGYTFDG 206
F+ + LE+ M G + D
Sbjct: 460 FKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDH 519
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T+I K G + A + ++++ + D V YN IN C GK + A L E
Sbjct: 520 VNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTE 579
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M G + D+ T+ +I C+ G A L M NL YN +V L G
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGA 639
Query: 327 IDHAINVFESMEVKDSFTYSSMVH 350
++ A + M V F+ SS+ H
Sbjct: 640 VEKAKYLLNEM-VSAGFSPSSLTH 662
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 156/372 (41%), Gaps = 35/372 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ I+ C F + L MR G+ PD TYN++I R + +L LL EM
Sbjct: 559 VFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMS 618
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P++ +YN+L+ LF G ++A + +M+ +P + T +L ++R D
Sbjct: 619 SIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVI 678
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + G ++ YN L++ LC G R A +L+E+ SG AP+ IT+ ++
Sbjct: 679 LDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILG 738
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ + M + + + + T++ +GR+ EA + +M G++ +
Sbjct: 739 HCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPN 798
Query: 241 -----------------------------------IVSYNTLINLYCKEGKLEAAYLLLD 265
+ +YN LI+ + K G + A L
Sbjct: 799 NLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFK 858
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+M+K+G T+ IL+ G + N + L+ M + GF + + I K G
Sbjct: 859 DMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPG 918
Query: 326 KIDHAINVFESM 337
A + +++
Sbjct: 919 MTWQAQRLLKNL 930
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 80/210 (38%), Gaps = 38/210 (18%)
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL-------------------- 263
A + +M GV D V+ NTL+ C+ G+++AA L
Sbjct: 118 HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIA 177
Query: 264 --------------LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
D M QG D + L+ G C+AG + AR L+ M + G D
Sbjct: 178 GYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDP 237
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 365
N+ Y + + ++ A +++E M + D T S++V LC+ R A L
Sbjct: 238 NVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALF 297
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
K G ++D L +G +E
Sbjct: 298 REMDKVGAAPNHVTYCTLIDSLAKAGRGKE 327
>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
Length = 795
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 194/389 (49%), Gaps = 4/389 (1%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
LN + I V +N LI G RN +S +++LL+ M G PD+ +YN+LM+ +
Sbjct: 5 LNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCK 64
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
+G A ++ ++ +L P T+ +++ CK++ ++AL M+ + VP++VT
Sbjct: 65 IGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVT 124
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
Y ++ GLCK+G++ A+ + +E+ + G PN +Y T++ F+ + M
Sbjct: 125 YTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMV 184
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
+G FD Y ++ K G A D + ++ + + + V+Y+ LI+ +CK G +
Sbjct: 185 VRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVN 244
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
LLL EME++ + ++ ++DG K G + A + M + N+ Y ++
Sbjct: 245 KGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLI 304
Query: 319 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
D K + A+++F+ M+ + ++F S V+NL ++ R+ A +L + G+
Sbjct: 305 DGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLL 364
Query: 375 ILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ +++DG +G +A I ++
Sbjct: 365 PDRVNYTSMMDGFFKAGKESDAFNIAQEM 393
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 172/348 (49%), Gaps = 5/348 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M G+ PD V Y S++ G + S + ++ EM E DV +YN L++ LF+LGK
Sbjct: 358 MMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK 417
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
E+ M L P +ATFN M+N CK NAL++ ++ +G P +T NI
Sbjct: 418 Y-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNI 476
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
L++ LC AG + +L ++ G P T+ ++ ++R+ + L + + G
Sbjct: 477 LVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMG 536
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
D Y T+I+ F ++G ++ AT + M+ G+ DI++YN LI+ YC L+ A+
Sbjct: 537 VKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAF 596
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+ +M +G + T+ IL+ GL A IK A + M + G N Y+ +V
Sbjct: 597 AVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGH 656
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
GK G + + ++ M K + TY+ ++ K K++ A +L+
Sbjct: 657 GKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELM 704
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 196/408 (48%), Gaps = 7/408 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ + G +L M E I P+V+ Y+S++ G T+ LL+ ++D++ +M++
Sbjct: 233 LIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRN 292
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V+ Y +L+ F+ + A +F++M L + +N L ++ + A
Sbjct: 293 ILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEAD 352
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ + G +P+ V Y ++ G KAG+ A I +E+ + + + Y ++
Sbjct: 353 ELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGL 412
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ KY+ + M++ G D + T+I A+ K G L A + +M + G++ +
Sbjct: 413 FKLGKYE-SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNS 471
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL-E 300
++ N L+ C G++E LL++M GF TH ++D K+ LH+ +
Sbjct: 472 ITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRAD-VILHMHD 530
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
+ +G +L YN ++ + G I A VF+ M K D TY++++H C +
Sbjct: 531 QLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISS 590
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
L A + L GV ++ GL + +EA + ++++
Sbjct: 591 HLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMK 638
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 188/397 (47%), Gaps = 7/397 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ + ++ M E G+ P+ +Y +LI + ++ + L M+ G
Sbjct: 128 IMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRG 187
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I DV Y +LM LF+ G + A +FQ ++ L P T++ +++G CK +
Sbjct: 188 IGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGE 247
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +++ P ++ Y+ ++ G K G L A +++++ PN Y T++
Sbjct: 248 LLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGY 307
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ + + L++ MK +G + F + + + GR++EA + + M++ G+ D
Sbjct: 308 FKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDR 367
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y ++++ + K GK A+ + EM ++ D + +LI+GL K G + H
Sbjct: 368 VNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTG- 426
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M ++G + +N +++ K+G + +A+ + M+ +S T + +V LC A
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
+ LL L G + KAV+D S RR
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDA--SSKSRR 521
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 177/401 (44%), Gaps = 39/401 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID YC+ +L M+ G +PD+VTYN+L+ G + L + L+ E+ +
Sbjct: 22 VLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLV 81
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P+V +Y +L+ + ++A ++ +M L P T+ ++NGLCK+ + A
Sbjct: 82 NLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEA 141
Query: 121 LRMFRGLQKHGFVP-----------------------------------ELVTYNILIKG 145
+FR +++ G VP ++V Y L+ G
Sbjct: 142 KSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDG 201
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
L KAG A + + L + PN +TY+ ++ + G +L M+ K +
Sbjct: 202 LFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPN 261
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y +++ + K G L EA D M +MV + ++ Y TLI+ Y K + A L
Sbjct: 262 VIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFK 321
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM+ +G E + + ++ L ++G ++ A + M G + Y ++D K G
Sbjct: 322 EMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAG 381
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 362
K A N+ + M K D Y+ +++ L K + S S
Sbjct: 382 KESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESES 422
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 156/349 (44%), Gaps = 41/349 (11%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
MR+ G++PD T+N++I + L +L LL+EM G+ P+ + N L+ L G+
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
++ + DM+ P T +L+ K+R D L M L G +L TYN
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNT 546
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
LI C+ G +R A + K++ G + ITY ++
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIH---------------------- 584
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
GYC LK+A QM+T+GV ++ +YN L+ ++ A
Sbjct: 585 ------GYCIS-------SHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAA 631
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG-ARLHLEYMNKIGFDSNLEAYNCIVDR 320
L+++M+++G + T+ IL+ G K GN+K +L+ E + K GF YN ++
Sbjct: 632 GLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITK-GFVPKTRTYNVLISC 690
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
K K+ A + + M+V+ +S TY ++ K + P +K L
Sbjct: 691 FAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSL 739
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 145/339 (42%), Gaps = 49/339 (14%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C + +LN M G P T+ +++ ++++ L + D+++ M
Sbjct: 476 ILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGM 535
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ D+ +YN+L+ +LG A VF+DM+ + T+N +++G C + + A
Sbjct: 536 GVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKA 595
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P + TYNIL+ GL A ++ A ++ ++ + G PNA TY ++
Sbjct: 596 FAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILV-- 653
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
G G KIG +KE +M+T G
Sbjct: 654 ------------------------SGHG---------KIGNMKECVKLYCEMITKGFVPK 680
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG-------------LC 287
+YN LI+ + K K+ A L+ EM+ +G + T+ ILI G L
Sbjct: 681 TRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLK 740
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
++ + RL E MN+ GF CI L K GK
Sbjct: 741 RSYQAEAKRL-FEEMNEKGFIPCENTLACISFTLAKPGK 778
>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
viburnoides]
Length = 431
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 148/285 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV+YN+L+ G R L L ML
Sbjct: 147 ILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 206
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ + K D+AN +F +M+ L P F +++G CKN D A
Sbjct: 207 GVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLA 266
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + P+L+TYN LI GLCK G L+ A ++ E+ G P+ ITYTT++
Sbjct: 267 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDG 326
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + E M ++ D Y +I+ GR +A + +M++ G++ D
Sbjct: 327 CCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPD 386
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y +IN +CK+G + LL EM++ G T+ +L++G
Sbjct: 387 ARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 155/309 (50%), Gaps = 2/309 (0%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ ++ + + + D + + G+ P V SYN+
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNT 182
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M+ + P T+++++NG CK D+A +F + G
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKG 242
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP V + LI G CK GR+ A I K++ +P+ ITY T++ + K
Sbjct: 243 LVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAH 302
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
++ M KG D Y T+I K G L A ++ ++M+ + +LD V Y LI+
Sbjct: 303 HLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGL 362
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 310
C EG+ A +L EM G + D T+T++I+ CK G++ KG++L L+ M + G +
Sbjct: 363 CXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKL-LKEMQRDGHVPS 421
Query: 311 LEAYNCIVD 319
+ YN +++
Sbjct: 422 VVTYNVLMN 430
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 141/298 (47%), Gaps = 1/298 (0%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E+LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ + G P++ TY++LI G CK + A + E+ G PN + +
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXF 250
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A +++M
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSX 310
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG L+ A+ M ++ D +T LI GLC G
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVD 370
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
A L M +G + Y I++ K G + + + M+ +D S + +N+
Sbjct: 371 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ-RDGHVPSVVTYNV 427
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 127/272 (46%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y + + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWG 172
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ ++Y T+M R G + SAM G D + Y +I K + +A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDAN 232
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ + V + TLI+ +CK G+++ A + +M Q D T+ LI GL
Sbjct: 233 ELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 292
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K A ++ M+ G + Y ++D K+G +D A + M + D
Sbjct: 293 CKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDX 352
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC R A K+L L G++
Sbjct: 353 VXYTALISGLCXEGRSVDAEKMLREMLSVGLK 384
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 133/301 (44%), Gaps = 4/301 (1%)
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
F+ ++ ++ + +A+ +R +H F T +++ L K + +E+
Sbjct: 74 VFSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEI 133
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
+ G+ + + +M ++ +J + A+ + G Y T++ ++++G L
Sbjct: 134 LECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 193
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
E M+ GVQ D+ +Y+ LIN CKE K + A L DEM +G + T L
Sbjct: 194 DEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTL 253
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 340
IDG CK G + A + M +L YN ++ L K G + A ++ + M K
Sbjct: 254 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGL 313
Query: 341 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
D TY++++ CK L A + ++ R+ A++ GL G +A+K
Sbjct: 314 KPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEK 373
Query: 399 I 399
+
Sbjct: 374 M 374
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 164/322 (50%)
Query: 4 DAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP 63
D +C + N+M I+PDV T+ L+ G + + + ++L M+ GI
Sbjct: 150 DKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIK 209
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
P V +YNSLM F + + ++A +F M ++P +++I++NG CK + D A+ +
Sbjct: 210 PGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMEL 269
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
+ + +P +VTY+ LI GLCK+G++ A ++ E+ D G PN +TY++I+ +
Sbjct: 270 LKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCK 329
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
N + + +L+ MK +G + + Y +I + G+L++A E ++ G L++ +
Sbjct: 330 NHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYT 389
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
Y +I +C +G + A LL +ME G + T+ I+I L K + A L M
Sbjct: 390 YTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMI 449
Query: 304 KIGFDSNLEAYNCIVDRLGKDG 325
+ FD + N ++ + G
Sbjct: 450 ETNFDGRVALTNDLIASIWVTG 471
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 175/367 (47%), Gaps = 14/367 (3%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D ++ NR+ + +P + +N ++ ++ L L +M GI P++ + N L
Sbjct: 44 DDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNIL 103
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN-RYTD---------NALR 122
++ QLG A V ++ P T T N ++ GLC N + D +A+
Sbjct: 104 INSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVD 163
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+F + P++ T+ IL+ G CK GR++ A+ +L + G P +TY ++M F
Sbjct: 164 LFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYF 223
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
++ I + M + G + D Y +I F KI + EA + +++M + ++V
Sbjct: 224 LVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVV 283
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
+Y++LI+ CK GK+ A L+DEM +G + T++ ++D LCK + A L M
Sbjct: 284 TYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQM 343
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 358
G N+ Y ++ L + GK++ A VFE + VK + +TY+ M+ C
Sbjct: 344 KNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLF 403
Query: 359 PSASKLL 365
A LL
Sbjct: 404 DEALTLL 410
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 165/333 (49%), Gaps = 10/333 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL----------LSCS 50
+LI+++CQ + +++L ++ + G P+ +T N+LI G N L +
Sbjct: 102 ILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDA 161
Query: 51 LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 110
+DL ++M+ I PDV+++ L+ + G+ EA V M+ + P T+N +++G
Sbjct: 162 VDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDG 221
Query: 111 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
+ + A +F + + G P++ +Y+ILI G CK + A +LKE+ PN
Sbjct: 222 YFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPN 281
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
+TY++++ ++ K L+++ M +G + Y +++ A K ++ A +
Sbjct: 282 VVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLT 341
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
QM G+Q ++ +Y LI C+ GKLE A + +++ +G + YT+T++I G C G
Sbjct: 342 QMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKG 401
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
A L M G N + Y I+ L K
Sbjct: 402 LFDEALTLLSKMEDNGCIPNAKTYEIIILSLFK 434
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 166/331 (50%), Gaps = 14/331 (4%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
D+A +F ++ + TP FN +L L K+++ L + + ++ G P LV NIL
Sbjct: 44 DDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNIL 103
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNR---------KYKLGLE 192
I C+ G + +A +L ++ G+ PN IT T++K C + K K ++
Sbjct: 104 INSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVD 163
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ + M + D + + ++ F K GR+KEA + + M+ G++ +V+YN+L++ Y
Sbjct: 164 LFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYF 223
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
++ A + + M + G D +++ILI+G CK + A L+ M+ N+
Sbjct: 224 LVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVV 283
Query: 313 AYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
Y+ ++D L K GKI +A+ + + M + + TYSS++ LCK ++ +A LL
Sbjct: 284 TYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQM 343
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
G++ ++ GL SG +A+K+
Sbjct: 344 KNQGIQPNMYTYTILIKGLCQSGKLEDARKV 374
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 150/309 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D +C+ +L M GI P VVTYNSL+ G ++ + + + M ++
Sbjct: 182 ILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQL 241
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD+ SY+ L++ ++ DEA + ++M + P T++ +++GLCK+ A
Sbjct: 242 GVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYA 301
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L++ + G P +VTY+ ++ LCK ++ A +L ++ + G PN TYT ++K
Sbjct: 302 LKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKG 361
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K + ++ + KG+ + + Y +I F G EA + +M +G +
Sbjct: 362 LCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPN 421
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y +I K+ + E A LL EM + F+ LI + G+ G L +
Sbjct: 422 AKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASIWVTGSSPGNSLLCK 481
Query: 301 YMNKIGFDS 309
K +++
Sbjct: 482 KQGKAAYNT 490
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 106/271 (39%), Gaps = 49/271 (18%)
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
N I Y + N + + + + ++ T + ++ + VK
Sbjct: 26 NFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLS 85
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE---------------- 273
++M G++ ++V+ N LIN +C+ G + +A+ +L ++ K G++
Sbjct: 86 QKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLN 145
Query: 274 -----------------------------CDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
D YT TIL+DG CK G +K A+ L M
Sbjct: 146 GKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMI 205
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPS 360
G + YN ++D +++ A ++F +M D +YS +++ CK K +
Sbjct: 206 QGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDE 265
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
A +LL + +++DGL SG
Sbjct: 266 AMELLKEMHHKQIIPNVVTYSSLIDGLCKSG 296
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 177/378 (46%), Gaps = 6/378 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ YC+ + A +++ M GI DV TYN I R+S + LL M
Sbjct: 216 LLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNM 275
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ +YN+L+ + GK + A +VF +M +L P + T+N ++ G C AL
Sbjct: 276 VYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEAL 335
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + HG P VTY L+ GL K IL+ + G + I+YT ++
Sbjct: 336 RLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGL 395
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N + +++L M + D + +I F ++G++ A + M +M G+ +
Sbjct: 396 CKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNG 455
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ Y+TLI YCK G L+ A M G D +T +L+ C+ G ++ A + +
Sbjct: 456 ILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNH 515
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
M+++G D N ++CI++ G G A +VF+ M FTY ++ LC
Sbjct: 516 MSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGH 575
Query: 358 LPSASKLL--LSCLKSGV 373
+ A K L C+ + V
Sbjct: 576 INEALKFFHRLRCIPNAV 593
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 192/438 (43%), Gaps = 44/438 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ ID C+ GY +L RMR + P+ +TYN+LI+G R + + + DEM
Sbjct: 250 VFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLF 309
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
+ P+ +YN+L+ HC G EA R+ M+ L P T+ +LNGL KN
Sbjct: 310 NLLPNSITYNTLIAGHC--TTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFG 367
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
+ ++ G ++Y +I GLCK G L A +L ++ P+ +T++ ++
Sbjct: 368 MVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLI 427
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
FR K EI+ M + G +G Y T+I + K+G LKEA + M G
Sbjct: 428 NGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHV 487
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D + N L+ +C+ GKLE A ++ M + G + + T +I+G +G+ A
Sbjct: 488 ADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSV 547
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-------------------- 338
+ MN G +L Y ++ L G I+ A+ F +
Sbjct: 548 FDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCR 607
Query: 339 -------------------VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
+ D+FTY++++ LCK ++ +A L ++ G+ A
Sbjct: 608 SGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPA 667
Query: 380 -QKAVVDGLRHSGCRREA 396
++VDGL G R A
Sbjct: 668 VYTSLVDGLLKHGHARAA 685
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 176/395 (44%), Gaps = 4/395 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D ++ M GI PDV T+N L+ + LL +M E G+ P +YN+L
Sbjct: 157 DMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTL 216
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
++ + G+ A+++ M + T+N+ ++ LC++ + + + ++++
Sbjct: 217 LNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMV 276
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P +TYN LI G + G++ A + E+ PN+ITY T++ L
Sbjct: 277 YPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALR 336
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
++ M G + Y ++ K + +E+M GV++ +SY +I+ C
Sbjct: 337 LMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLC 396
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K G LE A LLD+M K D T ++LI+G + G I A+ + M K G N
Sbjct: 397 KNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGI 456
Query: 313 AYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
Y+ ++ K G + A+N + M V D FT + +V C+ +L A +
Sbjct: 457 LYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHM 516
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ G+ +++G +SG +A + K+
Sbjct: 517 SRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKM 551
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 161/340 (47%), Gaps = 4/340 (1%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G++P V T N ++ + + ML GI PDV ++N L++ L + GK A
Sbjct: 135 GLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNA 194
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+ + M + P T+N +LN CK A ++ + G ++ TYN+ I
Sbjct: 195 GFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDN 254
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LC+ R +LK + + PN ITY T++ R K ++ ++ M +
Sbjct: 255 LCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPN 314
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y T+IA G + EA M+ MV+ G++ + V+Y L+N K + +L+
Sbjct: 315 SITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILE 374
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M G ++T +IDGLCK G ++ A L+ M K+ + ++ ++ +++ + G
Sbjct: 375 RMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVG 434
Query: 326 KIDHAINV----FESMEVKDSFTYSSMVHNLCKAKRLPSA 361
KI++A + +++ V + YS++++N CK L A
Sbjct: 435 KINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEA 474
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 166/345 (48%), Gaps = 4/345 (1%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
++ LI RN ++ ++ M G+ P V++ N ++ L + K D F+ M
Sbjct: 107 VFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGM 166
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
+ + P ATFNI+LN LC+ NA + R +++ G P VTYN L+ CK GR
Sbjct: 167 LAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRY 226
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
+ A ++ + G + TY + R+ + G +L M+R + Y T+
Sbjct: 227 KAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTL 286
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I+ FV+ G+++ AT ++M + + ++YNTLI +C G + A L+D M G
Sbjct: 287 ISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGL 346
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
++ T+ L++GL K LE M G + +Y ++D L K+G ++ A+
Sbjct: 347 RPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQ 406
Query: 333 VFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ + M D T+S +++ + ++ +A +++ K+G+
Sbjct: 407 LLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGL 451
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 190/407 (46%), Gaps = 5/407 (1%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
+ + C+ + ++N M PD TY +LIAG + + +L L + +E G+
Sbjct: 602 LTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGL 661
Query: 63 -PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ Y SL+ L + G A +F++M+ D+ P T FN++++ + T
Sbjct: 662 LSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVN 721
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++ L TYNIL+ G K + + K++ G P+ ++ +++
Sbjct: 722 DILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGY 781
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+++ + + ++IL + +G+ D F + +I F + +K+A + ++QM V ++
Sbjct: 782 CQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNV 841
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN L N + A+ +L + + G + LI+G+C+ GNIKGA +
Sbjct: 842 DTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDE 901
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M +G S+ A + IV L KI++AI V + M + T+++++H CK
Sbjct: 902 MKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEAN 961
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A +L V++ A ++ GL +G A K+ +++
Sbjct: 962 VAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMK 1008
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 188/414 (45%), Gaps = 5/414 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C++ + +N M G+ P+ VT++ +I G + + + D+M
Sbjct: 495 VLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSF 554
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +++Y L+ L G +EA + F + C FN L C++ +A
Sbjct: 555 GHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDA 614
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH-APNAITYTTIMK 179
+ + + + F+P+ TY LI GLCK G++ A + + + G +PN YT+++
Sbjct: 615 IALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVD 674
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
++ + L I M K D + +I + + G+ + D + M + +
Sbjct: 675 GLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCF 734
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
++ +YN L++ Y K + ++L +M + GF DK++ LI G C++ + A L
Sbjct: 735 NLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKIL 794
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
++ G + +N ++ + + ++ A + + M + + TY+++ + L +
Sbjct: 795 RWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRT 854
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
A ++L L+SG +++G+ G + A K+Q +++ IS
Sbjct: 855 SDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGIS 908
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 142/320 (44%), Gaps = 39/320 (12%)
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+A + F M L P T N++L L K + D F+G+ G P++ T+NIL+
Sbjct: 123 DAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILL 182
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
LC+ G+ + A ++L+++ +SG P A+TY T++
Sbjct: 183 NALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLN------------------------ 218
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
YC K GR K A+ ++ M + G+ +D+ +YN I+ C++ + YLL
Sbjct: 219 ----WYC-------KKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLL 267
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
L M + ++ T+ LI G + G I+ A + M+ N YN ++
Sbjct: 268 LKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCT 327
Query: 324 DGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
G I A+ + + M + TY ++++ L K S +L GVR+ +
Sbjct: 328 TGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHIS 387
Query: 380 QKAVVDGLRHSGCRREAKKI 399
A++DGL +G EA ++
Sbjct: 388 YTAMIDGLCKNGMLEEAVQL 407
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 163/404 (40%), Gaps = 40/404 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGI-SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
LI C+ A + + E G+ SP+ Y SL+ G ++ +L + +EML
Sbjct: 636 LIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNK 695
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD ++N ++ + GK + N + M +L AT+NI+L+G K
Sbjct: 696 DVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARC 755
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA------------ 168
+++ + +HGF+P+ +++ LI G C++ A IL+ + GH
Sbjct: 756 FMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITK 815
Query: 169 -----------------------PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
PN TY + R + +L + G
Sbjct: 816 FCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPT 875
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y T+I ++G +K A ++M T G+ V+ + ++ K+E A +LD
Sbjct: 876 NKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLD 935
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M + T T L+ CK N+ A M ++ AYN ++ L +G
Sbjct: 936 LMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANG 995
Query: 326 KIDHAINVFESMEVKDSFTYSS----MVHNLCKAKRLPSASKLL 365
I+ A ++E M+ +D + +S ++ + C + KLL
Sbjct: 996 DIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLL 1039
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 154/354 (43%), Gaps = 8/354 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG-ATRNSLLSCSLDLLDEMLE 59
++ID Y + IL+ M+ + ++ TYN L+ G A R+++ C + L +M+
Sbjct: 706 VIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFM-LYKDMIR 764
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G PD +S++SL+ Q D A ++ + + TFN+++ C+
Sbjct: 765 HGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKK 824
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + + + + +P + TYN L GL + A +L+ L +SG P Y T++
Sbjct: 825 AFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLIN 884
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
R K +++ MK G + ++ +++ A ++ M+ +
Sbjct: 885 GMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIP 944
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ ++ TL+++YCKE + A L ME + D + +LI GLC G+I+ A
Sbjct: 945 TVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLY 1004
Query: 300 EYMNKIGFDSNLEAYNCIVDRLG------KDGKIDHAINVFESMEVKDSFTYSS 347
E M + N Y ++D + K+ I E M + F YSS
Sbjct: 1005 EEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQDRELMRLNQQFCYSS 1058
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 155/370 (41%), Gaps = 5/370 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ + + + I+ +M + G+ P+ + Y++LI + L +L+ M
Sbjct: 425 VLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHS 484
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D ++ N L+ + GK +EA M L P + TF+ ++NG + A
Sbjct: 485 GHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKA 544
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G P L TY L+KGLC G + A L +A + + + T +
Sbjct: 545 FSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTS 604
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG-VQL 239
R+ + +++ M + D F Y +IA K G++ A + + G +
Sbjct: 605 TCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSP 664
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ Y +L++ K G AA + +EM + E D ++ID + G L
Sbjct: 665 NPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDIL 724
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKA 355
M NL YN ++ K + +++ M + D F++ S++ C++
Sbjct: 725 STMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQS 784
Query: 356 KRLPSASKLL 365
K A K+L
Sbjct: 785 KSFDVAIKIL 794
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 117/282 (41%), Gaps = 41/282 (14%)
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
N + +++ C RNR ++ M +G + V+ + VK ++ +
Sbjct: 104 NPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFF 163
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
+ M+ G+ D+ ++N L+N C+ GK + A LL +ME+ G T+ L++ CK
Sbjct: 164 KGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKK 223
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD------------------------- 324
G K A ++ M G ++ YN +D L +D
Sbjct: 224 GRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITY 283
Query: 325 ----------GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
GKI+ A VF+ M + +S TY++++ C + A +L+ +
Sbjct: 284 NTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVS 343
Query: 371 SGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM--AKISH 410
G+R + A+++GL + I ++RM ++SH
Sbjct: 344 HGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSH 385
>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 143/287 (49%)
Query: 52 DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 111
D E+LE G P ++ +N LM + G+ A VF + L P +FN ++NG
Sbjct: 122 DFYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGY 181
Query: 112 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 171
K D R+ + G P++ TY+ILI GLCK G+L A + E+ D+G PN
Sbjct: 182 IKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNG 241
Query: 172 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 231
+T+TT++ +N K L +EI M +G + D Y T+I K G LK+ D +++
Sbjct: 242 VTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDE 301
Query: 232 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
M+ +G++ D +SY TLI+ CKEG LE A L ++M ++ D +T LI LC+ G
Sbjct: 302 MIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGR 361
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K A + M+
Sbjct: 362 AGDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQ 408
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 148/271 (54%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV++N+LI G + L L M
Sbjct: 141 ILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHAS 200
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV++Y+ L++ L + GK DEAN +F +M+ L P TF +++G CKN D A
Sbjct: 201 GAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLA 260
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + G P+L+TYN LI GLCK G L+ ++ E+ +G P+ I+YTT++
Sbjct: 261 MEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDG 320
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ LE+ + M ++ D Y +I+ + GR +A + +M++ G++ D
Sbjct: 321 SCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPD 380
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+Y +IN +CK+ + A LL EM++ G
Sbjct: 381 NGTYTMIINEFCKKRDSKTASKLLREMQRDG 411
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 146/299 (48%)
Query: 8 QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 67
+F F + + E G + +N L+ + + + + D + + G+ P V
Sbjct: 113 EFRYFKLVWDFYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVV 172
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
S+N+L++ +LG DE R+ M P T++I++NGLCK D A +F +
Sbjct: 173 SFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEM 232
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
+G VP VT+ LI G CK ++ A I K++ G +P+ ITY T++ + +
Sbjct: 233 LDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGEL 292
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
K +++ M G D Y T+I K G L+ A + +M+ + ++LD V+Y L
Sbjct: 293 KQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTAL 352
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
I+ C+EG+ A +L EM G + D T+T++I+ CK + K A L M + G
Sbjct: 353 ISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDG 411
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 157/343 (45%), Gaps = 8/343 (2%)
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 124
D + ++ LM + G +A + F+ + T +L L + RY +
Sbjct: 65 DFYVFSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFY 124
Query: 125 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
+ + + G+ L +NIL++ CK G +R A+ + + G P+ +++ T++ +
Sbjct: 125 KEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKL 184
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
G + SAM G D + Y +I K G+L EA + +M+ +G+ + V++
Sbjct: 185 GDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTF 244
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
TLI+ +CK K++ A + +M QG D T+ LI GLCK G +K ++ M
Sbjct: 245 TTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIM 304
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPS 360
G + +Y ++D K+G ++ A+ + M + D Y++++ LC+ R
Sbjct: 305 NGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGD 364
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A K+L L G++ +++ C++ K SK+
Sbjct: 365 AEKMLREMLSVGLKPDNGTYTMIINEF----CKKRDSKTASKL 403
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ D I +M G+SPD++TYN+LI G + L DL+DEM+ G
Sbjct: 247 LIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD SY +L+ + G + A + MI + + +++ LC+ +A
Sbjct: 307 LKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAE 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+M R + G P+ TY ++I CK +TA +L+E+ G P +T
Sbjct: 367 KMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPVPGVVT 418
>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 418
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 144/283 (50%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
E+LE G P ++ +N LMH + G+ A VF + L P +FN ++NG K
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMG 185
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D R+ + G P++ TY++LI GLCK ++ A + E+ + G PN +T+T
Sbjct: 186 ILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFT 245
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T++ +N K L +EI + +G + D Y T+I F K G LK+ D +++M
Sbjct: 246 TLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMK 305
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G++ D ++Y TLI+ CKEG LE A+ +M ++ D +T LI GLCK G A
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDA 365
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
L M +G + Y +++ K+G ++ + + M+
Sbjct: 366 EKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQ 408
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 153/306 (50%), Gaps = 35/306 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ + + + + G+ P VV++N+L+ G + +L L + M
Sbjct: 141 ILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHAS 200
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV++Y+ L++ L + K DEA+ +F +M+ L P TF +++G CKN D A
Sbjct: 201 GAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLA 260
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + G P+L+TYN LI G CK G L+ R ++ E+ G P+ ITYTT++
Sbjct: 261 MEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLID- 319
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
G C K G L+ A +Y ++M+ + ++LD
Sbjct: 320 ---------------------------GSC-------KEGDLETAFEYRKKMIEENIRLD 345
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V Y LI+ CKEG+ A +L EM G + D T+TI+++ CK G++ L+
Sbjct: 346 DVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLK 405
Query: 301 YMNKIG 306
M + G
Sbjct: 406 EMQRDG 411
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 142/277 (51%), Gaps = 12/277 (4%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
FNI+++ CK A +F + K G P +V++N L+ G K G L + +
Sbjct: 139 FNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMH 198
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
SG P+ TY+ ++ + K E+ M KG +G + T+I K G+L
Sbjct: 199 ASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLD 258
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A + +Q+++ G+ D+++YNTLI +CK+G L+ L+DEM +G + DK T+T LI
Sbjct: 259 LAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLI 318
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLE----AYNCIVDRLGKDGK-IDHAINVFESME 338
DG CK G+++ A EY K+ + N+ Y ++ L K+G+ +D + E +
Sbjct: 319 DGSCKEGDLETA---FEYRKKM-IEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLS 374
Query: 339 V---KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
V DS TY+ +++ CK + + SKLL + G
Sbjct: 375 VGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDG 411
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 103/202 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ D + + + M E G+ P+ VT+ +LI G +N L ++++ ++L
Sbjct: 211 VLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQ 270
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD+ +YN+L++ + G + + +M L P T+ +++G CK + A
Sbjct: 271 GLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETA 330
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + + V Y LI GLCK GR A +L+E+ G P++ TYT +M
Sbjct: 331 FEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMNE 390
Query: 181 CFRNRKYKLGLEILSAMKRKGY 202
+N G ++L M+R G+
Sbjct: 391 FCKNGDVNTGSKLLKEMQRDGH 412
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 149/335 (44%), Gaps = 6/335 (1%)
Query: 71 SLMHCLFQLGKPDEANRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
SL+ + D A+ VF ++ G F+ ++ ++ + +AL FR +
Sbjct: 34 SLIQVIVSRKGKDSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDALECFRLSR 93
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
+H F T ++ L K + KE+ + G+ + + +M + + +
Sbjct: 94 EHKFWVPFDTCRKVLDHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIR 153
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
L + A+ + G + T++ ++K+G L E M G Q D+ +Y+ LI
Sbjct: 154 LAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLI 213
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
N CKE K++ A+ L DEM ++G + T T LIDG CK G + A + + G
Sbjct: 214 NGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLS 273
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
+L YN ++ K G + ++ + M +K D TY++++ CK L +A +
Sbjct: 274 PDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEY 333
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
++ +R+ A++ GL G +A+K+
Sbjct: 334 RKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKM 368
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 90/172 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ D I ++ G+SPD++TYN+LI G + L + DL+DEM G
Sbjct: 247 LIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y +L+ + G + A + MI ++ + +++GLCK + +A
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAE 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+M R + G P+ TY I++ CK G + T +LKE+ GH P+ +T
Sbjct: 367 KMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDGHVPSVVT 418
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 105/219 (47%), Gaps = 9/219 (4%)
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
GY + + ++ F K G ++ A + + G++ +VS+NTL+N Y K G L+
Sbjct: 131 GYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEG 190
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
+ L + M G + D YT+++LI+GLCK + A + M + G N + ++D
Sbjct: 191 FRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDG 250
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
K+GK+D A+ +++ + + D TY+++++ CK L L+ G++
Sbjct: 251 HCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPD 310
Query: 377 KSAQKAVVDGLRHSGCRREA-----KKIQSKIRMAKISH 410
K ++DG G A K I+ IR+ + +
Sbjct: 311 KITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVY 349
>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 181/368 (49%), Gaps = 8/368 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ + +L++M E I PDVV Y+++I ++ S + L EMLE G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V++YN ++ G+ +A R+ +DMI ++ P TFN +++ K A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + P+ VTYN +I G CK R A K + D +P+ +T+ TI+
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVY 442
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R ++ G+++L + R+G + Y T+I F ++ L A D ++M++ GV D
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++ N L+ +C+ KLE A L + ++ + D + I+I G+CK + A
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 562
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G + +++ YN ++ I A +F M+ D+ TY++++ KA
Sbjct: 563 LPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGE 622
Query: 358 LPSASKLL 365
+ + +L+
Sbjct: 623 IDKSIELI 630
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 151/309 (48%), Gaps = 4/309 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID +C F + +L M E I+PDV+T+N+LI+ + + L + L DEML
Sbjct: 337 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 396
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD +YNS+++ + + D+A +F M +P TFN +++ C+ + D +
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGM 452
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ R + + G V TYN LI G C+ L A+ + +E+ G P+ IT ++
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N K + LE+ ++ D Y +I K ++ EA D + GV+ D+
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN +I+ +C + + A +L +M+ G E D T+ LI G KAG I + +
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Query: 302 MNKIGFDSN 310
M GF +
Sbjct: 633 MRSNGFSGD 641
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 199/439 (45%), Gaps = 54/439 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL--------- 51
+LI +C + ++ + G PDVVT+N+L+ G +S +L
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 52 ------DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 105
L D+M+E+G+ P V ++N+L++ L G+ EA + M+ L T+
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 106 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
++NG+CK T +AL + +++ P++V Y+ +I LCK G A+++ E+ +
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 166 GHAPNAITYTTIMK--CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
G APN TY ++ C F ++ +L M + D + +I+A VK G+L
Sbjct: 326 GIAPNVFTYNCMIDGFCSF--GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 224 EATDYMEQMV-----TDGVQL--------------------------DIVSYNTLINLYC 252
EA ++M+ D V D+V++NT+I++YC
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYC 443
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
+ +++ LL E+ ++G + T+ LI G C+ N+ A+ + M G +
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 368
N ++ ++ K++ A+ +FE +++ D+ Y+ ++H +CK ++ A L S
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563
Query: 369 LKSGVRILKSAQKAVVDGL 387
GV ++ G
Sbjct: 564 PIHGVEPDVQTYNVMISGF 582
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 109/206 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID YC+ D G +L + G+ + TYN+LI G L+ + DL EM+ G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD + N L++ + K +EA +F+ + + T +NI+++G+CK D A
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F L HG P++ TYN++I G C + A + ++ D+GH P+ TY T+++ C
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC 617
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGF 207
+ + +E++S M+ G++ D F
Sbjct: 618 LKAGEIDKSIELISEMRSNGFSGDAF 643
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 176/418 (42%), Gaps = 21/418 (5%)
Query: 9 FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 68
F S D + M + V N +I R + ++ L +M IP +++S
Sbjct: 84 FKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS 143
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
+N L+ C K + F + P TFN +L+GLC AL +F +
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 129 KHGFV---------------PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+ GF+ P ++T+N LI GLC GR+ A ++ ++ G + +T
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
Y TI+ + K L +LS M+ D Y +I K G +A +M+
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI- 292
G+ ++ +YN +I+ +C G+ A LL +M ++ D T LI K G +
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
+ +L E +++ F + YN ++ K + D A ++F+ M D T+++++
Sbjct: 384 EAEKLCDEMLHRCIFPDTV-TYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVY 442
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
C+AKR+ +LL + G+ A + L H C + + ISH
Sbjct: 443 CRAKRVDEGMQLLREISRRGL----VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ + +A + M G+ PD +T N L+ G N L +L+L + +
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I D +YN ++H + + K DEA +F + + P T+N+M++G C +A
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+F ++ +G P+ TYN LI+G KAG + + ++ E+ +G + +A T
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 732
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 171/368 (46%), Gaps = 4/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+IDA + ++ + +L M G+ +++TY+ +I + ++ LL EM E G
Sbjct: 297 VIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENG 356
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +Y+S + + G+ +EA + ++M +TP ++ I+++ K A+
Sbjct: 357 VAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAI 416
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +Q HG P+++ Y+ I +A R A W+L+E+ +G PN I+Y + + C
Sbjct: 417 DLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDAC 476
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + K+ +E+L M G D Y VIA+ + +EA D +M G+ D+
Sbjct: 477 AKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDV 536
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
VS NT IN + G E A +L EM G D ++ ID K K L
Sbjct: 537 VSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLRE 596
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M+ +G + +Y + DG A+ + M D TY+S ++ K R
Sbjct: 597 MSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGR 656
Query: 358 LPSASKLL 365
A+ LL
Sbjct: 657 WKEATVLL 664
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 169/370 (45%), Gaps = 4/370 (1%)
Query: 8 QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 67
Q+ + +L+RM+E G+ PD Y+S IA +++LL M G PPDV
Sbjct: 163 QYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVL 222
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+Y+S + ++ + EA + + M + P ++ ++ K + A+ + + +
Sbjct: 223 TYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEM 282
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
G P+++TY+ +I K G+ A +L E+ G N ITY+ ++ C + ++
Sbjct: 283 PAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQW 342
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
+ + +L M+ G D Y + I+A K G+ +EA + +M +GV + +SY +
Sbjct: 343 EEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIV 402
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
I+ K G+ A LL EM+ G D ++ ID +A + A L M G
Sbjct: 403 ISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGL 462
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASK 363
N+ +YN +D K G+ A+ + M D TYS+++ + ++ A
Sbjct: 463 TPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALD 522
Query: 364 LLLSCLKSGV 373
L + G+
Sbjct: 523 LFREMQRQGI 532
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 160/337 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I A ++ ++ +L M+E G++PDV+TY+S I+ + ++ LL EM
Sbjct: 331 IVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPME 390
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ SY ++ + G+ EA + Q+M + P ++ ++ + + A
Sbjct: 391 GVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQA 450
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + R + G P +++YN I K GR + A +L+E+ G AP+ ITY+ ++
Sbjct: 451 LWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIAS 510
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C R+++ L++ M+R+G T D T I A + G +EA D + +M T G+ D
Sbjct: 511 CAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPD 570
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+SY T I+ K + + LL EM G D ++ + G K A + L
Sbjct: 571 AISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLR 630
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M +G ++ YN ++ K G+ A + M
Sbjct: 631 DMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQM 667
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 133/277 (48%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
IDA Q ++ +L M G++P+V++YNS I + +++LL EM G+
Sbjct: 438 IDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGL 497
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
PDV +Y++++ + +EA +F++M +TP + N +N + + + AL
Sbjct: 498 APDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALD 557
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ + G VP+ ++Y I K R + +L+E+ G P+AI+Y M C
Sbjct: 558 VLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACS 617
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ +K L +L M G + D Y + I A K GR KEAT + QM T G+ D+
Sbjct: 618 VDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVN 677
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
S+N I+ + A +L EM G ++ T+
Sbjct: 678 SFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNEATY 714
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 102/219 (46%), Gaps = 3/219 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
++ + M+ GI+PDVV+ N+ I + +LD+L EM MG+ PD SY +
Sbjct: 517 WEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRT 576
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
+ + + E + ++M LTP ++ ++ + AL + R + G
Sbjct: 577 AIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVG 636
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
P++VTYN I K GR + A +L+++ G AP+ ++ + C ++ +
Sbjct: 637 LSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAV 696
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
E+L M+ G + + Y T + A + G E D+M+
Sbjct: 697 EVLFEMRALGVSPNEATYLTAMYACKRCG---EKDDWMQ 732
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 79/181 (43%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
I+A Q ++ +L M G+ PD ++Y + I + +DLL EM +G+
Sbjct: 543 INACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGL 602
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
PD SY M G EA + +DM+ L+P T+N +N K A
Sbjct: 603 TPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATV 662
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ R + G P++ ++N I + TA +L E+ G +PN TY T M C
Sbjct: 663 LLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNEATYLTAMYACK 722
Query: 183 R 183
R
Sbjct: 723 R 723
>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
salviifolia]
Length = 431
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 151/285 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P V+YN+L+ G R +L L ML
Sbjct: 147 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLAS 206
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+A+ +F +M+ L P TF +++G CKN D A
Sbjct: 207 GVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 266
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + +P+L+TYN LI GLCK G L+ A ++ ++ G P+ ITYTT++
Sbjct: 267 MEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDG 326
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + E M ++ D Y +I+ + GR +A + +M++ G+ D
Sbjct: 327 CCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPD 386
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y +IN +CK+G + LL EM++ G T+ +L++G
Sbjct: 387 TGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 157/309 (50%), Gaps = 2/309 (0%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ ++ + + + D + + G+ P SYN+
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNT 182
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M+ + P T+++++NGL K D+A +F + G
Sbjct: 183 LMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKG 242
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP VT+ LI G CK GR+ A I K++ P+ ITY T++ + K
Sbjct: 243 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAH 302
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+++ M RKG D Y T+I K G L A ++ ++M+ + ++LD V Y LI+
Sbjct: 303 DLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGL 362
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 310
C+EG+ A +L EM G D T+T++I+ CK G++ KG++L L+ M + G +
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKL-LKEMQRDGHVPS 421
Query: 311 LEAYNCIVD 319
+ YN +++
Sbjct: 422 VVTYNVLMN 430
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 145/298 (48%), Gaps = 1/298 (0%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E+LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRL 190
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ + G P++ TY++LI GL K ++ A + E+ G PN +T+
Sbjct: 191 GVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTF 250
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + D Y T+I K G LK+A D ++ M
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSR 310
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG L++A+ M ++ D +T LI GLC+ G
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVD 370
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
A L M +G + + Y I++ K G + + + M+ +D S + +N+
Sbjct: 371 AEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQ-RDGHVPSVVTYNV 427
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 139/273 (50%), Gaps = 4/273 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
FNI+++ CK+ A +F + K G P V+YN L+ G + G L + +
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAML 204
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
SG P+ TY+ ++ + K E+ M KG +G + T+I K GR+
Sbjct: 205 ASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A + +QM++ + D+++YNTLI CK+G L+ A+ L+D+M ++G + DK T+T LI
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLI 324
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK-IDHAINVFESMEV--- 339
DG CK G++ A H + M + + Y ++ L ++G+ +D + E + V
Sbjct: 325 DGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLN 384
Query: 340 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
D+ TY+ +++ CK + SKLL + G
Sbjct: 385 PDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDG 417
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 131/271 (48%), Gaps = 4/271 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y + + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 113 VLEYLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 172
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+A++Y T+M R G + SAM G D + Y +I K ++ +A
Sbjct: 173 LRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDAD 232
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ + V++ TLI+ +CK G+++ A + +M Q D T+ LI GL
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K A ++ M++ G + Y ++D K+G +D A + M + D
Sbjct: 293 CKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDD 352
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
Y++++ LC+ R A K+L L G+
Sbjct: 353 VVYTALISGLCQEGRSVDAEKMLREMLSVGL 383
>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 780
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 167/340 (49%), Gaps = 1/340 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL-SCSLDLLDEMLE 59
+LI AY + + RM+E PDV TYN ++ R + + + +EML+
Sbjct: 132 VLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIMMREDVFFMLAFAVYNEMLK 191
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
P+++++ LM L++ G+ +A ++F DM ++P T+ I+++GLC+ ++
Sbjct: 192 CNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPED 251
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A ++F ++ G P+ V +N L+ G CK GR+ A +L+ G Y++++
Sbjct: 252 ARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLID 311
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
FR R+Y E+ + M ++ D Y +I K G++++A + M + G+
Sbjct: 312 GLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITP 371
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D YN +I C G LE L EM + D THTILI +C+ G ++ A
Sbjct: 372 DTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIF 431
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
+ K G ++ +N ++D L K G++ A + MEV
Sbjct: 432 LEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEV 471
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 188/417 (45%), Gaps = 50/417 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID + D + L ++ G+S D + LI+ + L +++ M E
Sbjct: 97 LVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRMKEF 156
Query: 61 GIPPDVWSYNSLMHCL------FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
PDV++YN ++ + F L A V+ +M+ + +P TF I+++GL K
Sbjct: 157 DCRPDVFTYNVILRIMMREDVFFML-----AFAVYNEMLKCNCSPNLYTFGILMDGLYKK 211
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
T +A +MF + G P VTY ILI GLC+ G AR + E+ SG+ P+++ +
Sbjct: 212 GRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAH 271
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
++ DGF K+GR+ EA + +
Sbjct: 272 NALL--------------------------DGF---------CKLGRMVEAFELLRLFEK 296
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
DG L + Y++LI+ + + A+ L M K+ + D +TILI GL KAG I+
Sbjct: 297 DGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIED 356
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVH 350
A L M G + YN ++ L G ++ + + E+ D+ T++ ++
Sbjct: 357 ALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILIC 416
Query: 351 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
++C+ + A ++ L KSG + A++DGL SG +EA+ + K+ + +
Sbjct: 417 SMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGR 473
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 186/445 (41%), Gaps = 49/445 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID + + + + M + I PD++ Y LI G ++ + +L LL M G
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKG 368
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD + YN+++ L G +E + +M + P T I++ +C+N A
Sbjct: 369 ITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAE 428
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL------------------- 162
+F ++K G P + T+N LI GLCK+G L+ AR +L ++
Sbjct: 429 EIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAHSGNRS 488
Query: 163 --------------------GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
D+G++P+ ++Y ++ R L++L+ ++ KG
Sbjct: 489 FDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGL 548
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
+ D Y T+I ++GR +EA D + Y +L+ C+ KL A+
Sbjct: 549 SPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRRRKLLVAFN 606
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
L + K+ D T I+ K G + A L ++ + L Y + L
Sbjct: 607 LWMKYLKKISCLDDETAN-EIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLC 665
Query: 323 KDGKIDHAINVFESMEVKDSFTYSS----MVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
+ G+ A+ VF + K ++H LCK ++L +A + L L + +++
Sbjct: 666 QSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIDVFLYTLDNNFKLMPR 725
Query: 379 AQKAVVDGLRHSGCRREAKKIQSKI 403
++ L S RE +I S++
Sbjct: 726 VCNYLLSSLLQS---REKMEIVSQL 747
>gi|125575133|gb|EAZ16417.1| hypothetical protein OsJ_31886 [Oryza sativa Japonica Group]
Length = 678
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 188/396 (47%), Gaps = 6/396 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L M +G PD ++ N LIA R LS +L +L++M G P ++N+L+ C+F
Sbjct: 273 VLEVMVLSGGVPDTISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMF 332
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
D A +++ + P T ++++ +CKN AL + L G P++V
Sbjct: 333 NQRMYDRAISFWKEQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDVV 392
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN LI CKAGRL A++IL L G PN TY ++ R++ ++L M
Sbjct: 393 TYNALISASCKAGRLNDAKFILTRLAAEGLEPNGTTYCILLHALCNMRRWDEVCDLLEDM 452
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ D Y I F K G L +A D +E+MV + DIV+ NTL+N K+G +
Sbjct: 453 NQVNRDPDVTTYNIFINYFCKYGHLDQAIDVLERMVINNCSPDIVTCNTLLNAISKKGMV 512
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
E A + + + G++ T+ LID L K +K A + + M G + Y +
Sbjct: 513 EEALGIARCIRENGYKLVLITYNTLIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSL 572
Query: 318 VDRLGKDGKIDHAINVFESM-----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
V K D A+++ M EVK + T+ ++ LC+ ++ +A+++ L
Sbjct: 573 VMGFCKKDMADEALDLLNQMLTLGFEVKTT-TFVMVIQALCRDGKVEAAAEITKVMLSKN 631
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
S ++V + SG +EA+ + K+ +I
Sbjct: 632 SIPGNSLCSSIVTKVAKSGWNKEAQMLHQKLVECEI 667
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 149/330 (45%), Gaps = 35/330 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL-------------- 46
MLI C+ + +L MR +G SP +T+N+LI +
Sbjct: 291 MLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYDRAISFWKEQLRL 350
Query: 47 --------------LSC-------SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
L C +L++LDE+ G PDV +YN+L+ + G+ ++A
Sbjct: 351 GWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNALISASCKAGRLNDA 410
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+ + L P T+ I+L+ LC R D + + + P++ TYNI I
Sbjct: 411 KFILTRLAAEGLEPNGTTYCILLHALCNMRRWDEVCDLLEDMNQVNRDPDVTTYNIFINY 470
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
CK G L A +L+ + + +P+ +T T++ + + L I ++ GY
Sbjct: 471 FCKYGHLDQAIDVLERMVINNCSPDIVTCNTLLNAISKKGMVEEALGIARCIRENGYKLV 530
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y T+I A K +K+A ++M++DG+ D ++Y +L+ +CK+ + A LL+
Sbjct: 531 LITYNTLIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFCKKDMADEALDLLN 590
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
+M GFE T ++I LC+ G ++ A
Sbjct: 591 QMLTLGFEVKTTTFVMVIQALCRDGKVEAA 620
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 90/180 (50%), Gaps = 1/180 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ I+ +C++ D +L RM SPD+VT N+L+ ++ ++ +L + + E
Sbjct: 466 IFINYFCKYGHLDQAIDVLERMVINNCSPDIVTCNTLLNAISKKGMVEEALGIARCIREN 525
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G + +YN+L+ L + + +A +F +M+ ++P T+ ++ G CK D A
Sbjct: 526 GYKLVLITYNTLIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFCKKDMADEA 585
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP-NAITYTTIMK 179
L + + GF + T+ ++I+ LC+ G++ A I K + P N++ + + K
Sbjct: 586 LDLLNQMLTLGFEVKTTTFVMVIQALCRDGKVEAAAEITKVMLSKNSIPGNSLCSSIVTK 645
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 8/244 (3%)
Query: 126 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 185
G KHG Y ++ C +G+L A ++ E+ G P I++ +
Sbjct: 210 GFSKHGGK----CYADNLRRYCNSGKLIQACCVIDEMVLHGQIPETKCCVRIIRGLVKTG 265
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
K +L M G D +IA + G+L A +E M G +++N
Sbjct: 266 KANKARHVLEVMVLSGGVPDTISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFN 325
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
TLI + + A E + G+ + T T+L+D +CK + A L+ ++
Sbjct: 326 TLIRCMFNQRMYDRAISFWKEQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLE 385
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSA 361
G ++ YN ++ K G+++ A + + + + TY ++H LC +R
Sbjct: 386 GCQPDVVTYNALISASCKAGRLNDAKFILTRLAAEGLEPNGTTYCILLHALCNMRRWDEV 445
Query: 362 SKLL 365
LL
Sbjct: 446 CDLL 449
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 61/126 (48%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LIDA + + + M GISPD +TY SL+ G + + +LDLL++ML +G
Sbjct: 537 LIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFCKKDMADEALDLLNQMLTLG 596
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
++ ++ L + GK + A + + M+ + P + + ++ + K+ + A
Sbjct: 597 FEVKTTTFVMVIQALCRDGKVEAAAEITKVMLSKNSIPGNSLCSSIVTKVAKSGWNKEAQ 656
Query: 122 RMFRGL 127
+ + L
Sbjct: 657 MLHQKL 662
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 206/451 (45%), Gaps = 60/451 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE- 59
+++ C+ D +L ++RE+G+ +V+TY+ +I G + S + +L++ M
Sbjct: 78 IVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAG 137
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G PDV ++NSL+ L + EA +F+ M P +++ +L+GLCK D
Sbjct: 138 GGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDE 197
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA------------------------ 155
A R++ + + VP+LV Y + GLCKA R+ A
Sbjct: 198 ACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIG 257
Query: 156 ------------RWILKELGDSG----------------HAPNAITYTTIMKCCFRNRKY 187
+++ L SG H P+A + T++ ++++
Sbjct: 258 ILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRL 317
Query: 188 KLGLEILSAMK--RKGYTFDGF-GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
G+ + MK ++ Y Y ++ K +L EA + + +M G+ D+V+Y
Sbjct: 318 PDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTY 377
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
+ L++ CK GKL+ A LL+EM K+G D +T +++ L KAG + A HLE M
Sbjct: 378 SALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKA 437
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPS 360
G +L YN ++D L K G+ID AI M D F+Y+ ++ LC++ +
Sbjct: 438 RGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAG 497
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
A + +K GV +++DGL +G
Sbjct: 498 AHAIFQEMVKRGVLPDTVLYHSLLDGLARNG 528
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 197/433 (45%), Gaps = 25/433 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+DA + + Y +M+ G PD TY+ ++ G + L + +LL ++ E G
Sbjct: 44 FLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESG 103
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNA 120
+ +V +Y+ ++ + + D+A +F+ M G P TFN +L GLC A
Sbjct: 104 VKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEA 163
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + K G P +++Y+ L+ GLCKAGRL A + +E+ + P+ + YT+ +
Sbjct: 164 FVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTG 223
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM----------- 229
+ + + M KG D + TVI K G +EA + M
Sbjct: 224 LCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLD 283
Query: 230 ------EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK-QGFECDK--YTHT 280
E+M++ +NTLI+ CK +L LL M+ + F C T+
Sbjct: 284 EACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYN 343
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 338
I++D LCKA + A+ + M G ++ Y+ +VD L K GK+D A ++ E M
Sbjct: 344 IMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKE 403
Query: 339 --VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
DSFT +S+++ L KA ++ A L + G ++DGL +G EA
Sbjct: 404 GVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEA 463
Query: 397 KKIQSKIRMAKIS 409
+K+ AK +
Sbjct: 464 ITFLAKMVAAKCT 476
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 162/338 (47%), Gaps = 10/338 (2%)
Query: 35 NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 94
N +I R+ +L + +EM+ PP +N+L+H + + + + +FQ M
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKS 329
Query: 95 GD---LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
P T+NIM++ LCK + D A + + +G P++VTY+ L+ GLCK G+
Sbjct: 330 MKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGK 389
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
L A +L+E+ G P++ T +I+ + K L L MK +G T D Y T
Sbjct: 390 LDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNT 449
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
++ K GR+ EA ++ +MV D+ SY +I C+ G+ A+ + EM K+G
Sbjct: 450 LLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRG 509
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
D + L+DGL + G L LE + + + +VD L K GK + A
Sbjct: 510 VLPDTVLYHSLLDGLARNGL---EDLALELLKTSLCKPDFVMHKMVVDGLCKAGKAEDAC 566
Query: 332 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
V E M D+FTY ++V L K ++ A +L+
Sbjct: 567 EVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLV 604
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 180/394 (45%), Gaps = 25/394 (6%)
Query: 23 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 82
R+ G V TYN + + + + + +M G PPD ++Y+ ++ L + G+
Sbjct: 30 RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGEL 89
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG-FVPELVTYNI 141
D+A + + + T++++++G CK D+AL +F+ + G VP++VT+N
Sbjct: 90 DKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNS 149
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
L+KGLC R+ A + + + +G PN I+Y+T++ + + + M K
Sbjct: 150 LLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKS 209
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
D Y + + K R+ EA D +MVT G + D V+++T+I + CK+G E A
Sbjct: 210 CVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ 269
Query: 262 L----------LLDEMEKQGFECDKYTH-------TILIDGLCKAGNIKGARL---HLEY 301
+LDE K E H LI +CK+ + L ++
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKS 329
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M + NLE YN +VD L K ++D A + M D TYS++V LCK +
Sbjct: 330 MKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGK 389
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
L A LL K GV ++++ L +G
Sbjct: 390 LDRACDLLEEMSKEGVFPDSFTDASILNALSKAG 423
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 114/463 (24%), Positives = 199/463 (42%), Gaps = 63/463 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
++ID C+ D I M G PDVVT+NSL+ G +S + L + M +
Sbjct: 113 VVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAK 172
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G P+V SY++L+ L + G+ DEA R++++M+ P + + GLCK
Sbjct: 173 AGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAE 232
Query: 120 ALRMFRGLQKHGFVPELVTY-----------------NILIKGLCKAGRLRTARWILKEL 162
A R + G + V + N +I+ LC++G L A +E+
Sbjct: 233 ACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEM 292
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGL------------------------------- 191
H P+A + T++ ++++ G+
Sbjct: 293 ISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKA 352
Query: 192 -------EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
E+++ M G + D Y ++ K+G+L A D +E+M +GV D +
Sbjct: 353 KQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTD 412
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
+++N K GK++ A L+ M+ +G D T+ L+DGLCKAG I A L M
Sbjct: 413 ASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVA 472
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPS 360
++ +Y I+ L + G+ A +F+ M + D+ Y S++ L +
Sbjct: 473 AKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDL 532
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A +LL + L ++ K VVDGL +G +A ++ ++
Sbjct: 533 ALELLKTSLCKPDFVM---HKMVVDGLCKAGKAEDACEVVERM 572
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 146/298 (48%), Gaps = 6/298 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMR---EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
LI A C+ G + RM+ E P++ TYN ++ + L + +L++EM
Sbjct: 307 LIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMA 366
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G+ PDV +Y++L+ L +LGK D A + ++M + P + T +LN L K D
Sbjct: 367 NYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVD 426
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
AL ++ G P+LVTYN L+ GLCKAGR+ A L ++ + P+ +YT I+
Sbjct: 427 YALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIII 486
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
R+ + I M ++G D Y +++ + G A +E + T +
Sbjct: 487 TALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLA---LELLKTSLCK 543
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
D V + +++ CK GK E A +++ M GF D +T+ ++ GL K G + AR
Sbjct: 544 PDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKAR 601
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 81/164 (49%), Gaps = 3/164 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+ D T L +M A +PDV +Y +I R+ + + + EM++ G
Sbjct: 450 LLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRG 509
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD Y+SL+ L + G D A + + +C P ++++GLCK ++A
Sbjct: 510 VLPDTVLYHSLLDGLARNGLEDLALELLKTSLC---KPDFVMHKMVVDGLCKAGKAEDAC 566
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
+ + GF + TY +++GL K G++ AR ++ + ++
Sbjct: 567 EVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDASET 610
>gi|299471535|emb|CBN80021.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 607
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 187/404 (46%), Gaps = 8/404 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
++ +++ M G++PDV++Y+S I+ R +L+L ++M G+ PDV +Y S
Sbjct: 154 WEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITYGS 213
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
+ G+ EA + + + LTP +++ ++ K AL + R ++
Sbjct: 214 AIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMKAMR 273
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
P ++TYN I K GR + A +L+E+ G P+ ++Y++++ C + ++K +
Sbjct: 274 LAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAI 333
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+IL M G + + Y + I A K G+ KEA + +M T GV ++ YN+ I
Sbjct: 334 DILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAAC 393
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN--IKGARLHLEYMNKIGFDS 309
K + + A LL EM G ++++ ID C GN IK L L M +G
Sbjct: 394 AKGEQWKEALALLREMPTVGLHTTVFSYSSAIDA-CGKGNLWIKAKEL-LREMATVGLAP 451
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 365
N YN +D G+ + + A+++ M D F+YSS + K + A +L
Sbjct: 452 NEVCYNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVL 511
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+G+ + +D G + A + ++R A ++
Sbjct: 512 KEMSAAGLAPDLICYNSAIDACSKGGRWKMAVALLGEMRAAGLT 555
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 168/368 (45%), Gaps = 4/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+IDA + + L M GI+PD +Y + I R +LDLL EML
Sbjct: 74 VIDACAKGGQWKMAVFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDLLREMLARD 133
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V YNS ++ + G+ + A + ++M L P +++ ++ + + AL
Sbjct: 134 VTPNVIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEAL 193
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ G P+++TY I GR + A +L+++ G PN I+Y++++ C
Sbjct: 194 ELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITAC 253
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++K+ L++L MK + Y I A K GR KEA D + +M T G+ D+
Sbjct: 254 AKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDV 313
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
VSY+++I+ K + + A +L EM G + ++ ID K G K A+ L
Sbjct: 314 VSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLRE 373
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M G + YN + K + A+ + M F+YSS + K
Sbjct: 374 MPTAGVTQRVIGYNSAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNL 433
Query: 358 LPSASKLL 365
A +LL
Sbjct: 434 WIKAKELL 441
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 170/377 (45%), Gaps = 13/377 (3%)
Query: 2 LID--AYCQFVS-------FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 52
LID +YC ++ ++ +L M G +PD+ Y+++I + ++
Sbjct: 30 LIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAVIDACAKGGQWKMAVF 89
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 112
L EM GI PD SY + ++ + G+ A + ++M+ D+TP +N +N
Sbjct: 90 FLMEMPTKGIAPDARSYGAAINACARGGRWKIALDLLREMLARDVTPNVIIYNSAINSCA 149
Query: 113 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
K + A+ + + + G P++++Y+ I + GR A + +++ SG AP+ I
Sbjct: 150 KAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVI 209
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
TY + + C ++K + +L + G T + Y +VI A K G+ K A D + +M
Sbjct: 210 TYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLREM 269
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
+ +I++YN I+ K G+ + A LL EM G D +++ +ID K
Sbjct: 270 KAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRW 329
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSM 348
K A L M +G N +YN +D K G+ A + M + Y+S
Sbjct: 330 KEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSA 389
Query: 349 VHNLCKAKRLPSASKLL 365
+ K ++ A LL
Sbjct: 390 IAACAKGEQWKEALALL 406
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 148/316 (46%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
IDA + + +L M G+ PDVV+Y+S+I ++ ++D+L EM +G+
Sbjct: 285 IDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGL 344
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P+ SYNS + + G+ EA + ++M +T +N + K AL
Sbjct: 345 SPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQWKEALA 404
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ R + G + +Y+ I K A+ +L+E+ G APN + Y + + C
Sbjct: 405 LLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCYNSAIDACG 464
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
R +++ +++L M G + D F Y + IAA K + KEA +++M G+ D++
Sbjct: 465 RGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDLI 524
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
YN+ I+ K G+ + A LL EM G + +++ ID + G K LE M
Sbjct: 525 CYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDACVRGGQWKEGIALLEEM 584
Query: 303 NKIGFDSNLEAYNCIV 318
G ++ Y+ ++
Sbjct: 585 RGSGVVPDVITYHALM 600
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 152/341 (44%), Gaps = 4/341 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L M+ ++P+++TYN+ I + ++DLL EM +G+PPDV SY+S++
Sbjct: 265 LLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACS 324
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ + EA + ++M L+P ++N ++ K A + R + G ++
Sbjct: 325 KGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVI 384
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
YN I K + + A +L+E+ G +Y++ + C + + E+L M
Sbjct: 385 GYNSAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREM 444
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
G + Y + I A + + +EA D + +M T G+ D+ SY++ I K +
Sbjct: 445 ATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQW 504
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A +L EM G D + ID K G K A L M G N+ +Y+
Sbjct: 505 KEALAVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSA 564
Query: 318 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 354
+D + G+ I + E M V D TY +++ K
Sbjct: 565 IDACVRGGQWKEGIALLEEMRGSGVVPDVITYHALMVTCAK 605
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 124/282 (43%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+IDA + + IL M G+SP+ ++YNS I + + LL EM G
Sbjct: 319 VIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAG 378
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ V YNS + + + EA + ++M L +++ ++ K A
Sbjct: 379 VTQRVIGYNSAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAK 438
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ R + G P V YN I + + A +L+E+ G +P+ +Y++ + C
Sbjct: 439 ELLREMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAAC 498
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++K L +L M G D Y + I A K GR K A + +M G+ +I
Sbjct: 499 AKGDQWKEALAVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNI 558
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
+SY++ I+ + G+ + LL+EM G D T+ L+
Sbjct: 559 ISYSSAIDACVRGGQWKEGIALLEEMRGSGVVPDVITYHALM 600
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 111/251 (44%), Gaps = 5/251 (1%)
Query: 120 ALRMFRGLQK-HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
ALR G++K G++ + +Y + I + G+ A +L+E+ G AP+ Y+ ++
Sbjct: 16 ALRAVDGMKKLPGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAVI 75
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
C + ++K+ + L M KG D Y I A + GR K A D + +M+ V
Sbjct: 76 DACAKGGQWKMAVFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDLLREMLARDVT 135
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+++ YN+ IN K G+ E A L+ EM G D +++ I + G + A
Sbjct: 136 PNVIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALEL 195
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 354
E M G ++ Y + G+ A+++ + + +YSS++ K
Sbjct: 196 FEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAK 255
Query: 355 AKRLPSASKLL 365
+ A LL
Sbjct: 256 EGQWKIALDLL 266
>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 418
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 145/271 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + +R+ G+ P VV++N+L+ G R L L M
Sbjct: 141 ILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHAS 200
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K DEAN +F +M+ L P TF +++G CKN D A
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLA 260
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + P+L+TYN LI GLCK G L+ AR ++ E+ G P+ ITYTT++
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDG 320
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ + E M + D Y +I+ + GR +A + +M++ G++ D
Sbjct: 321 SCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 380
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+Y +IN +CK+G + LL EM++ G
Sbjct: 381 SGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 139/283 (49%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
E+LE G P ++ +N LMH + G+ + VF + L P +FN ++NG +
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQG 185
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D R+ + G P++ TY++LI GLCK ++ A + E+ D G PN +T+T
Sbjct: 186 DLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFT 245
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T++ +N K L +EI M + + D Y T+I K G LK+A + + +M
Sbjct: 246 TLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMK 305
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G++ D ++Y TLI+ CK+G LE A+ M ++ D +T LI GLC+ G A
Sbjct: 306 GLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
L M +G + Y I++ K G + + + M+
Sbjct: 366 EKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 143/283 (50%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + S + D + + G+ P V S+N+LM+ + G D
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLD 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+ R+ M + P T+++++NGLCK D A +F + G VP VT+ LI
Sbjct: 189 KGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK G++ A I K++ +P+ ITY T++ + K +++ M KG
Sbjct: 249 DGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A +Y ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
L EM G + D T+T++I+ CK G++ L+ M + G
Sbjct: 369 LREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 130/272 (47%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y ++ + + G+ L +NIL+ CK G +R ++ + + G
Sbjct: 107 VLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWG 166
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ +++ T+M R G + SAM G D + Y +I K ++ EA
Sbjct: 167 LRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAN 226
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ +M+ G+ + V++ TLI+ +CK GK++ A + +M Q D T+ LI GL
Sbjct: 227 ELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K AR + M+ G + Y ++D KDG ++ A + M + D
Sbjct: 287 CKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDD 346
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 347 VAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 137/300 (45%), Gaps = 4/300 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F+ ++ ++ + +A+ +R ++H F T +++ L K + KE+
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYKEIL 128
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+ G+ + + +M + + +L + A+++ G + T++ +++ G L
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLD 188
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
+ M GVQ D+ +Y+ LIN CKE K++ A L EM +G + T T LI
Sbjct: 189 KGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLI 248
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
DG CK G + A + M +L YN ++ L K G + A N+ M +K
Sbjct: 249 DGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLK 308
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D TY++++ CK L +A + ++ +R+ A A++ GL G +A+K+
Sbjct: 309 PDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 102/202 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ D + M + G+ P+ VT+ +LI G +N + ++++ +ML
Sbjct: 211 VLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQ 270
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+ +YN+L++ L + G +A + +M L P T+ +++G CK+ + A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETA 330
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + + V Y LI GLC+ GR A +L+E+ G P++ TYT I+
Sbjct: 331 FEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINE 390
Query: 181 CFRNRKYKLGLEILSAMKRKGY 202
+ G ++L M+R G+
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGH 412
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 89/172 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ D I +M +SPD++TYN+LI G + L + +L++EM G
Sbjct: 247 LIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y +L+ + G + A + MI ++ + +++GLC+ + +A
Sbjct: 307 LKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAE 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+M R + G P+ TY ++I CK G + T +LKE+ GH P+ +T
Sbjct: 367 KMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 418
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 174/359 (48%), Gaps = 4/359 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ + +L M + P++V YN +I ++ L + DL ++++MG
Sbjct: 195 LINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMG 254
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+ +Y SL+ + G+ E ++ +M+ ++ P TFN++++ C+ A
Sbjct: 255 IDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQ 314
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
MF + K G P++VT+N LI G C G + AR + + + G P+ +YT ++
Sbjct: 315 GMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGY 374
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ + + + M+ K D Y ++I K GR+ A + + DG ++
Sbjct: 375 CKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNV 434
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN LI+ +CK ++ L M +G T+ ILI+G CK+ I+ A L
Sbjct: 435 ITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSV 494
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + YN + D L K G+I A +F+ M V D TY+ ++ CKA+
Sbjct: 495 MQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQ 553
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 192/414 (46%), Gaps = 10/414 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ I+ YC +++L + + G P+ +T +++ G N + ++D D +
Sbjct: 124 IWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQ 183
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ D Y +L++ L ++G+ +A ++ Q+M + P +N++++ CK+ T A
Sbjct: 184 GMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKA 243
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G P+++TY LI+G C+ G+ + ++ E+ + PN T+ ++
Sbjct: 244 RDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDA 303
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R K + + M ++G D + T+I+ G + EA + + G+ D
Sbjct: 304 FCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPD 363
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ SY LI YCK +++ A L +EM + D ++ LIDGLCK+G I A
Sbjct: 364 VWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFS 423
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
+N G N+ YN ++D K ID I +F+ M K TY+ +++ CK+K
Sbjct: 424 TINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSK 483
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
R+ A LL + ++ DGL SG +I + K+ H
Sbjct: 484 RIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSG------RISDAWELFKVMH 531
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 166/361 (45%), Gaps = 4/361 (1%)
Query: 9 FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 68
F D T+ N + P V+ +N++I + ++ LL +M+ G+ P +++
Sbjct: 62 FNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFT 121
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
+ ++C LG+ A V ++ P T ++ GLC N A+ +
Sbjct: 122 LSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVA 181
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
G + + V Y LI GLCK GR A +L+E+ PN + Y I+ ++
Sbjct: 182 AQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTC 241
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
++ + G D Y ++I F + G+ E M +MV + ++ ++N LI
Sbjct: 242 KARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLI 301
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
+ +C++GK+ A + + M K+G + D T LI G C GN+ AR + + + G
Sbjct: 302 DAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGIL 361
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
++ +Y ++ K +ID A+++F M K D YSS++ LCK+ R+ A +L
Sbjct: 362 PDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWEL 421
Query: 365 L 365
Sbjct: 422 F 422
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 149/293 (50%), Gaps = 4/293 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ + ++ M I+P+V T+N LI R + + + + M++ G
Sbjct: 265 LIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRG 324
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
PD+ ++N+L+ HCL G EA ++F + + P ++ I++ G CK + D
Sbjct: 325 QQPDIVTFNTLISGHCLH--GNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDE 382
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+ +F ++ V ++V Y+ LI GLCK+GR+ A + + + G PN ITY ++
Sbjct: 383 AVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILID 442
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + +G+E+ M KG T Y +I + K R++EA + + M + +
Sbjct: 443 AFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAP 502
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
D ++YN+L + CK G++ A+ L M G D T+ +L+D CKA ++
Sbjct: 503 DSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 129/253 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDA+C+ + N M + G PD+VT+N+LI+G + + + L D + E
Sbjct: 299 VLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFER 358
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PDVWSY L+ + + DEA +F +M C ++ ++ +++GLCK+ A
Sbjct: 359 GILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYA 418
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G P ++TYNILI CK + + K + G P +TY ++
Sbjct: 419 WELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILING 478
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++++ + + +LS M+ K D Y ++ K GR+ +A + + M G +D
Sbjct: 479 YCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVD 538
Query: 241 IVSYNTLINLYCK 253
+ +YN L++ +CK
Sbjct: 539 VATYNVLLDAFCK 551
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 152/329 (46%), Gaps = 10/329 (3%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
D+A +F +I P FN ++ + K ++ A+ + + + G P + T +I
Sbjct: 66 DDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIW 125
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
I C G + A +L + G+ PN IT TT+MK N + + ++ + +G
Sbjct: 126 INCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGM 185
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
D Y T+I KIGR +A +++M V+ +IV YN +I+ +CK+ A
Sbjct: 186 LLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARD 245
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLEYMNKIGFDSNLEAYNCIVDRL 321
L ++ G + D T+T LI G C+ G + L E +NK + N+ +N ++D
Sbjct: 246 LYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNK-NINPNVYTFNVLIDAF 304
Query: 322 GKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
+ GK+ A +F M + D T+++++ C + A KL + + G IL
Sbjct: 305 CRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERG--ILP 362
Query: 378 SAQKAVVDGLRHSGCRR--EAKKIQSKIR 404
+ + + C+R EA + +++R
Sbjct: 363 DVWSYTILIIGYCKCKRIDEAVSLFNEMR 391
>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
Length = 933
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 174/365 (47%), Gaps = 4/365 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDA C+ + D +L M E ISP+VVT++S+I G + LL + + M E
Sbjct: 384 VLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKER 443
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+V +Y +L+ F+ D A V+ DM+C + + ++NGL +N + A
Sbjct: 444 GINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEA 503
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +F+ G + V Y LI GL KAG + TA +EL D P+A+ Y + C
Sbjct: 504 MALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINC 563
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K+K L+ M+ G D Y T+I + + G +A + +M ++ +
Sbjct: 564 LCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPN 623
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++YNTL+ G +E A LL+EM GF TH ++ ++ + E
Sbjct: 624 LITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHE 683
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+M G +++ YN ++ L G A V E M D+ T+++++ CK+
Sbjct: 684 WMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSS 743
Query: 357 RLPSA 361
L +A
Sbjct: 744 HLDNA 748
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 180/385 (46%), Gaps = 11/385 (2%)
Query: 25 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 84
+G+S D V Y +LI G + + + E+++ + PD YN ++CL LGK E
Sbjct: 513 SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKE 572
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
A +M L P +T+N M+ C+ T AL++ ++ P L+TYN L+
Sbjct: 573 AKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVA 632
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
GL G + A+++L E+ +G +P+++T+ +++ C ++R+ + L+I M G
Sbjct: 633 GLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHA 692
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D Y T++ G ++AT +E+M+ G+ D +++N LI +CK L+ A+
Sbjct: 693 DITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATY 752
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+M Q + T L+ GL G I A L M K G + N Y+ + GK
Sbjct: 753 AQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQ 812
Query: 325 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR------ 374
A+ ++ M V TY++++ + KA + A +L K GV
Sbjct: 813 SNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTY 872
Query: 375 -ILKSAQKAVVDGLRHSGCRREAKK 398
IL S + +G C ++ K+
Sbjct: 873 DILVSGWSRIRNGTEVKKCLKDMKE 897
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 184/412 (44%), Gaps = 38/412 (9%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRN--------------------------SLL---- 47
+L M + G+ D VT N+L+AG RN SLL
Sbjct: 122 VLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRAGGITPWMSSAGTLSLLDIAG 181
Query: 48 ----SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT 103
+L + D M G+P DV YN+L+ + G+ D A V M + P AT
Sbjct: 182 FGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVAT 241
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
+ + C+ + + A ++ G+ ++G + ++VT + L+ GLC+ GR A + +E+
Sbjct: 242 YTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMD 301
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
G APN +TY T++ + + K L +L M +G D Y ++ K G+
Sbjct: 302 KVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTD 361
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
E D + ++D + + V+Y LI+ CK ++ A +L EME++ + T + +I
Sbjct: 362 EVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVI 421
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
+G K G + A + M + G + N+ Y ++D K D A+ V+ M +
Sbjct: 422 NGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVK 481
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ F S+V+ L + ++ A L SG+ + ++DGL +G
Sbjct: 482 VNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAG 533
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 160/384 (41%), Gaps = 36/384 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ F Y + M + G +P+ VTY +LI + L LL EM+ G
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D+ +Y +LM L + GK DE + + +L+P T+ ++++ LCK D A
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAE 399
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ +++ P +VT++ +I G K G L A + + + G PN +TY T++
Sbjct: 400 QVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGF 459
Query: 182 FRNRKYKLGLEILSAM-----------------------------------KRKGYTFDG 206
F+ + LE+ M G + D
Sbjct: 460 FKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDH 519
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T+I K G + A + ++++ + D V YN IN C GK + A L E
Sbjct: 520 VNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTE 579
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M G + D+ T+ +I C+ G A L M NL YN +V L G
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGA 639
Query: 327 IDHAINVFESMEVKDSFTYSSMVH 350
++ A + M V F+ SS+ H
Sbjct: 640 VEKAKYLLNEM-VSAGFSPSSLTH 662
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 193/448 (43%), Gaps = 41/448 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ +C+ DA +L+ M+EAG+ P+V TY I R + + DL + M+ G
Sbjct: 210 LVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNG 269
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ DV + ++L+ L + G+ EA +F++M P T+ +++ L K L
Sbjct: 270 VLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELL 329
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G V +LVTY L+ L K G+ + L+ +PN +TYT ++
Sbjct: 330 SLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDAL 389
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++L M+ K + + + +VI FVK G L +AT+Y M G+ ++
Sbjct: 390 CKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNV 449
Query: 242 VSYNTLINLYCK-----------------------------------EGKLEAAYLLLDE 266
V+Y TLI+ + K GK+E A L +
Sbjct: 450 VTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKD 509
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
G D +T LIDGL KAG++ A + E M++ + YN ++ L G
Sbjct: 510 ASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR-NMLPDAVVYNVFINCLCMLG 568
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
K A + M D TY++M+ + C+ A KLL S ++
Sbjct: 569 KFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYN 628
Query: 382 AVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+V GL +G +AK + +++ A S
Sbjct: 629 TLVAGLFGTGAVEKAKYLLNEMVSAGFS 656
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 156/372 (41%), Gaps = 35/372 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ I+ C F + L MR G+ PD TYN++I R + +L LL EM
Sbjct: 559 VFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMS 618
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P++ +YN+L+ LF G ++A + +M+ +P + T +L ++R D
Sbjct: 619 SIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVI 678
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + G ++ YN L++ LC G R A +L+E+ SG AP+ IT+ ++
Sbjct: 679 LDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILG 738
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ + M + + + + T++ +GR+ EA + +M G++ +
Sbjct: 739 HCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPN 798
Query: 241 -----------------------------------IVSYNTLINLYCKEGKLEAAYLLLD 265
+ +YN LI+ + K G + A L
Sbjct: 799 NLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFK 858
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+M+K+G T+ IL+ G + N + L+ M + GF + + I K G
Sbjct: 859 DMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPG 918
Query: 326 KIDHAINVFESM 337
A + +++
Sbjct: 919 MTWQAQRLLKNL 930
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 79/210 (37%), Gaps = 38/210 (18%)
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL-------------------------- 257
A + +M GV D V+ NTL+ C+ G++
Sbjct: 118 HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRAGGITPWMSSAGTLSLL 177
Query: 258 --------EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
AA + D M QG D + L+ G C+AG + AR L+ M + G D
Sbjct: 178 DIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDP 237
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 365
N+ Y + + ++ A +++E M + D T S++V LC+ R A L
Sbjct: 238 NVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALF 297
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
K G ++D L +G +E
Sbjct: 298 REMDKVGAAPNHVTYCTLIDSLAKAGRGKE 327
>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 418
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 146/271 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ N + + G+ P VV++N+L+ G R L L M
Sbjct: 141 ILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHAS 200
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN +F +M+ L P TF +++G CKN D A
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLA 260
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + P+L+TYN LI GLC+ G L+ AR ++ E+ G P+ ITYTT++
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDG 320
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + E M ++ D GY +I+ + GR +A + +M++ G++ D
Sbjct: 321 XCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPD 380
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
++Y +IN +CK+G + LL EM++ G
Sbjct: 381 TITYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 141/284 (49%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E+LE G P ++ +N LMH + G A VF + L P +FN ++NG +
Sbjct: 125 EEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ + G P++ TY++LI GLCK ++ A + E+ D G PN +T+
Sbjct: 185 GDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I + G LK+A D +++M
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG LE A+ M ++ + D +T LI GLC+ G
Sbjct: 305 KGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K G + + + M+
Sbjct: 365 AEKVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 148/295 (50%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ ++ + + + + + + G+ P V S+N+
Sbjct: 117 FKLVWGFYEEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNT 176
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M + P T+++++NGLCK D+A +F + G
Sbjct: 177 LMNGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKG 236
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP VT+ LI G CK GR+ A I K++ +P+ ITY T++ R K
Sbjct: 237 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQAR 296
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+++ M KG D Y T+I K G L+ A ++ ++M+ + +QLD V Y LI+
Sbjct: 297 DLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGL 356
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
C+EG+ A +L EM G + D T+T++I+ CK G++ L+ M + G
Sbjct: 357 CQEGRYLDAEKVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 134/273 (49%), Gaps = 6/273 (2%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y + + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 107 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWG 166
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ +++ T+M R G + +AM G D + Y +I K ++ +A
Sbjct: 167 LRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ + V++ TLI+ +CK G+++ A + +M Q D T+ LI GL
Sbjct: 227 ELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN-----VFESMEVKD 341
C+ G++K AR ++ M+ G + Y ++D K+G ++ A + E++++ D
Sbjct: 287 CRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQL-D 345
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 346 DVGYTALISGLCQEGRYLDAEKVLREMLSVGLK 378
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ D I +M +SPD++TYN+LI G R L + DL+DEM G
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN-RYTDNA 120
+ PD +Y +L+ + G + A + MI ++ + +++GLC+ RY D A
Sbjct: 307 LKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLD-A 365
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
++ R + G P+ +TY ++I CK G + T +LKE+ G P+ +T
Sbjct: 366 EKVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDGQMPSVVT 418
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 178/394 (45%), Gaps = 42/394 (10%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
D +L + G+ D V Y SL+ G + S +L++++EM E IP DV +YN
Sbjct: 499 MDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNV 558
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
L++ L + GK EA V+ MI L P AT+NIM+ CK DNAL ++ ++ H
Sbjct: 559 LINGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHK 617
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
+P +T N L+ GL +AG + A +L E+ G PN + + ++ ++ K L
Sbjct: 618 IMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVL 677
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
++ + G + Y +I F ++ K+AT ++ M+ DG D V+YN LI Y
Sbjct: 678 QMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGY 737
Query: 252 CKEGKLEAAYL-----------------------------------LLDEMEKQGFECDK 276
C+ ++ A L D+M++ G D
Sbjct: 738 CESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDA 797
Query: 277 YTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
T+ LI G K GN K + RL+ E + + GF YN ++ K GK+D A +
Sbjct: 798 STYDTLISGYGKIGNKKESIRLYCEMVAQ-GFVPKTSTYNVLISDFAKVGKMDQARELLN 856
Query: 336 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
M+V+ S TY ++ C + P + L
Sbjct: 857 EMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTL 890
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/461 (22%), Positives = 208/461 (45%), Gaps = 61/461 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ G I++ + G DV+ +N+LI G + +S +LDL++ M +
Sbjct: 117 ILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKE 176
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI-------------- 106
G+ D+ SYN+L++ + G+ D+A + ++ + FNI
Sbjct: 177 GLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEA 236
Query: 107 -------MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL 159
+++ CK + A ++ + +GF+P++VTY+ ++ GLCK GRL A+ +L
Sbjct: 237 DLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELL 296
Query: 160 KELGDSGHAPNAITYTTIMKCCFR-----------------------------------N 184
+E+ G PN + YTT++ F+ +
Sbjct: 297 REMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKS 356
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
K K ++ A+ + + Y +I + K+G ++ +++M + ++++Y
Sbjct: 357 SKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITY 416
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
+++IN Y K+G L+ A ++ +M Q + Y + ILIDG CKAG + A M
Sbjct: 417 SSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKL 476
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPS 360
G N ++ +V+ L + ++D A + + + + D Y+S++ KA + +
Sbjct: 477 SGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESA 536
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
A ++ + + +++GL G + EAK + S
Sbjct: 537 ALNMVEEMTEKSIPFDVVTYNVLINGLLEHG-KYEAKSVYS 576
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 182/390 (46%), Gaps = 28/390 (7%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
MR+ I P ++ +N LI L+S D+ EML +PP+V+++N L+H ++G
Sbjct: 1 MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
A + +++ D+ T T+N ++ G C++ + A + K + +T NI
Sbjct: 61 LILALDLLRNV---DVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
L+KG C+ G + I+ L G + I + T++ + + L L+++ M+++G
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQM-----VTDGV----------------QLD 240
D Y T+I F K G +A + ++ V D V + D
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEAD 237
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++Y T+I+ YCK+ LE A L +EM GF D T++ +++GLCK G + A+ L
Sbjct: 238 LITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLR 297
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M K+G D N AY ++D L K G A + V+ D +++V L K+
Sbjct: 298 EMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSS 357
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+ A + + K + A++DG
Sbjct: 358 KPKEAEDMFRALSKLNLIPNSITYTALIDG 387
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 189/407 (46%), Gaps = 21/407 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ A+C+ + L+ +R + D VTYN++I G ++ L++ + L M++
Sbjct: 50 VLVHAWCKMGNL---ILALDLLRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKK 106
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
D + N L+ ++G R+ +++ G FN +++G CK A
Sbjct: 107 DTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLA 166
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + ++K G + ++V+YN LI G CK G A+ +L E+ +S +++ + +
Sbjct: 167 LDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRI 226
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ L LE D Y T+I+ + K L+EA E+M+ +G D
Sbjct: 227 ---KKDDNLNLEA-----------DLITYTTIISTYCKQHGLEEARALYEEMIINGFLPD 272
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+Y++++N CK+G+L A LL EM+K G + + +T LID L KAG+ A
Sbjct: 273 VVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQS 332
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ G +L +VD L K K A ++F ++ + +S TY++++ CK
Sbjct: 333 QLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVG 392
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ LL + + ++++G G EA + K+
Sbjct: 393 DMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKM 439
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 144/287 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I AYC+ D + N M+ I P +T N+L+ G + + ++++L+EM M
Sbjct: 592 IMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVM 651
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P++ + L++ + GK + ++ + ++ L +N ++ C+ R T A
Sbjct: 652 GIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKA 711
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + + GFV + VTYN LI+G C++ ++ A ++ + G +PN +TY ++
Sbjct: 712 TSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGG 771
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
E+ MK G D Y T+I+ + KIG KE+ +MV G
Sbjct: 772 LLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPK 831
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
+YN LI+ + K GK++ A LL+EM+ +G T+ ILI G C
Sbjct: 832 TSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWC 878
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 116/246 (47%), Gaps = 14/246 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ ++L M G D VTYN+LI G +S + +L +ML G
Sbjct: 698 LIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEG 757
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++ +YN L+ L G E + +F M L P +T++ +++G K ++
Sbjct: 758 VSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESI 817
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R++ + GFVP+ TYN+LI K G++ AR +L E+ G P++ TY I+ C
Sbjct: 818 RLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTY-DILICG 876
Query: 182 FRNRKYKLGLE-------------ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
+ N L+ +++ M KG+ + + F + G++ +A
Sbjct: 877 WCNLSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKL 936
Query: 229 MEQMVT 234
++++ +
Sbjct: 937 LKEIFS 942
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 150/287 (52%), Gaps = 4/287 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C + NRM I+P+V T++ LI G + + + ++L M++
Sbjct: 239 LISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKN 298
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ DV +YNSLM +CL + + ++A +F M +TP +++IM+NG CK + D
Sbjct: 299 VKLDVVTYNSLMDGYCLVK--QVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDE 356
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+++F + P +VTYN L+ GLCK+GR A ++ E+ D G N ITY +I+
Sbjct: 357 AMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILD 416
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+N + +L+ +K KG D F Y +I K+GRL +A E ++ G
Sbjct: 417 AICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSP 476
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+I +Y +LIN +C +G + +L +M+ G + T+ ILI L
Sbjct: 477 NIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSL 523
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 166/341 (48%), Gaps = 4/341 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P + + ++ + +L L +M GI PD + N LM+C QLG + V
Sbjct: 56 PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
F ++ P TF I++ GLC AL + GF + V+Y LI GLC+
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
G + A +L+ + PN + Y+TI+ +++ ++ M K + D
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y ++I+ F +G+LK A D +M++D + ++ +++ LI+ +CKEGK+ A +L M
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
K+ + D T+ L+DG C + A+ M + G ++ +Y+ +++ K +D
Sbjct: 296 KKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVD 355
Query: 329 HAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLL 365
A+ +FE M K F TY+S+V LCK+ R A +L+
Sbjct: 356 EAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELV 396
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 188/376 (50%), Gaps = 4/376 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ A +L R+ + P+VV Y+++I ++ L++ + DL EM+
Sbjct: 169 LINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKR 228
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV +Y+SL+ +GK A +F MI ++ P TF+I+++G CK A
Sbjct: 229 ISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAK 288
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K ++VTYN L+ G C ++ A+ + + G P+ +Y+ ++
Sbjct: 289 NVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGF 348
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + +++ M K + Y +++ K GR A + +++M G +I
Sbjct: 349 CKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNI 408
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN++++ CK ++ A +LL +++++G + D +T+T+LI+GLCK G + A+ E
Sbjct: 409 ITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFED 468
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ G+ N+ Y +++ G D + + M+ + ++ TY ++H+L +
Sbjct: 469 LLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDE 528
Query: 358 LPSASKLLLSCLKSGV 373
A KLL + G+
Sbjct: 529 NDKAEKLLREMIARGL 544
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 199/408 (48%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ + Q +++ ++ + G PD VT+ LI G + +L D+++
Sbjct: 98 LLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQ 157
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D SY +L++ L ++G+ A ++ + + + P ++ +++ +CK++ ++A
Sbjct: 158 GFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDA 217
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + P++VTY+ LI G C G+L+ A + + PN T++ ++
Sbjct: 218 FDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDG 277
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + +L+ M +K D Y +++ + + ++ +A M GV D
Sbjct: 278 FCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPD 337
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ SY+ +IN +CK ++ A L +EM + + T+ L+DGLCK+G A ++
Sbjct: 338 VWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVD 397
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M+ G SN+ YN I+D + K+ +D AI + ++ K D FTY+ +++ LCK
Sbjct: 398 EMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVG 457
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
RL A K+ L G ++++G + G E + SK++
Sbjct: 458 RLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMK 505
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ D + + G SP++ TY SLI G L +L +M +
Sbjct: 448 VLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDN 507
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
G P+ +Y L+H LF+ + D+A ++ ++MI
Sbjct: 508 GCIPNAITYEILIHSLFEKDENDKAEKLLREMI 540
>gi|3152594|gb|AAC17075.1| Contains repeats similar to RECA protein gb|L26100 from
Acinetobacter calcoaceticus [Arabidopsis thaliana]
Length = 566
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 202/414 (48%), Gaps = 7/414 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ + ++ +M + G + VTYN+L+ G L+ SL ++ +++ G
Sbjct: 137 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 196
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ ++Y+ L+ ++ DEA ++ ++I P ++N++L G CK TD+A+
Sbjct: 197 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 256
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR L GF +V+YNIL++ LC GR A +L E+ AP+ +TY ++
Sbjct: 257 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 316
Query: 182 FRNRKYKLGLEILSAMKRKGYTF--DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + + L++L M + + F Y VIA K G++ +++M+ +
Sbjct: 317 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKP 376
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ +YN + +L K++ A+ ++ + + C + +I LC+ GN A L
Sbjct: 377 NEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLL 436
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMVHNLCK 354
M + GFD + Y+ ++ L +G A+ V ME ++ +++M+ LCK
Sbjct: 437 YEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 496
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+R A ++ ++ ++ +V+G+ H AK++ ++R+ K+
Sbjct: 497 IRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKV 550
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 145/293 (49%), Gaps = 2/293 (0%)
Query: 47 LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 106
LS S L+ ++ G P+V L++ L + + +A RV + M+ + P + +
Sbjct: 77 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 136
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
++N LCK A+++ ++ HG+ VTYN L++GLC G L + ++ L G
Sbjct: 137 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 196
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
APNA TY+ +++ ++ R +++L + KG + Y ++ F K GR +A
Sbjct: 197 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 256
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
++ G + ++VSYN L+ C +G+ E A LL EM+ T+ ILI+ L
Sbjct: 257 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 316
Query: 287 CKAGNIKGARLHLEYMNKIG--FDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
G + A L+ M+K F +YN ++ RL K+GK+D + + M
Sbjct: 317 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEM 369
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 148/372 (39%), Gaps = 77/372 (20%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ D + + G +VV
Sbjct: 241 VLLTGFCKEGRTDDAMALFRELPAKGFKANVV---------------------------- 272
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
SYN L+ CL G+ +EAN + +M GD P T+NI++N L + T+ A
Sbjct: 273 -------SYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQA 325
Query: 121 LRMFRGLQK--HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
L++ + + K H F +YN +I LCK G++ L E+ PN TY I
Sbjct: 326 LQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIG 385
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
C N K + I+ ++ K CT D+
Sbjct: 386 SLCEHNSKVQEAFYIIQSLSNKQKC------CT--------------HDF---------- 415
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
Y ++I C++G AA+ LL EM + GF+ D +T++ LI GLC G GA
Sbjct: 416 -----YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEV 470
Query: 299 LEYMNKI-GFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLC 353
L M + ++ +N ++ L K + D A+ VFE M + + TY+ +V +
Sbjct: 471 LSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIA 530
Query: 354 KAKRLPSASKLL 365
L A ++L
Sbjct: 531 HEDELELAKEVL 542
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 119/251 (47%), Gaps = 4/251 (1%)
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
++ L G P + L+ LCKA RL+ A +++ + SG P+A YT ++
Sbjct: 79 DSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLV 138
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ ++++ M+ GY + Y ++ +G L ++ ++E+++ G+
Sbjct: 139 NQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLA 198
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+ +Y+ L+ KE + A LLDE+ +G E + ++ +L+ G CK G A
Sbjct: 199 PNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMAL 258
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCK 354
+ GF +N+ +YN ++ L DG+ + A ++ M+ D TY+ ++++L
Sbjct: 259 FRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAF 318
Query: 355 AKRLPSASKLL 365
R A ++L
Sbjct: 319 HGRTEQALQVL 329
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 4/148 (2%)
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
L ++ ++E +VT G + ++ L+ CK +L+ A +++ M G D +T
Sbjct: 77 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 136
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 340
L++ LCK GN+ A +E M G+ SN YN +V L G ++ ++ E + K
Sbjct: 137 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 196
Query: 341 ---DSFTYSSMVHNLCKAKRLPSASKLL 365
++FTYS ++ K + A KLL
Sbjct: 197 LAPNAFTYSFLLEAAYKERGTDEAVKLL 224
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 254 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
E L ++ L+ + G + + T L+ LCKA +K A +E M G + A
Sbjct: 74 EPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASA 133
Query: 314 YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 369
Y +V++L K G + +A+ + E ME ++ TY+++V LC L + + + +
Sbjct: 134 YTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLM 193
Query: 370 KSGV 373
+ G+
Sbjct: 194 QKGL 197
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 192/387 (49%), Gaps = 4/387 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I C+ F G+ +L + E G+SP+VV Y +LI G ++ + + +L +M +
Sbjct: 163 IMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRL 222
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ +Y+ LM+ F+ G E +++++M + P +N +++ C + D A
Sbjct: 223 GLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKA 282
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F +++ G ++TYNILI GLC+ + A ++ ++ G +PN +TY ++
Sbjct: 283 FKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILING 342
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
RK + + + +K G + Y T+IA + K+ L A D +++M +
Sbjct: 343 FCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPS 402
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+Y LI+ + + E A + MEK G D YT+++L+ GLC GN+K A +
Sbjct: 403 KVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFK 462
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
+ ++ N YN ++ K+G A+ + M V + ++ S + LC+ +
Sbjct: 463 SLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDE 522
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAV 383
+ A LL + SG++ S K V
Sbjct: 523 KWKEAELLLGQMINSGLKPSVSLYKMV 549
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 164/355 (46%), Gaps = 14/355 (3%)
Query: 18 ILNRMREAGISPDVVTYN-SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS--YNSLMH 74
ILN + +G+ P + LI+G +SL+ L L P ++ Y+++++
Sbjct: 44 ILNHLLSSGMLPQAQSLILRLISGRIPSSLM---LQLTQAHFT---PCSTYTPLYDTVVN 97
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
D+A MI P + TFN +L L ++ Y D A +F L K V
Sbjct: 98 AYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNEL-KSKVVL 156
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
+ ++ I+IKG C+AG +L L + G +PN + YTT++ C ++ L +
Sbjct: 157 DAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLF 216
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
M R G + Y ++ F K G +E E M G+ + +YN LI+ YC +
Sbjct: 217 CKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCND 276
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
G ++ A+ + EM ++G C T+ ILI GLC+ A + +NK+G N+ Y
Sbjct: 277 GMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTY 336
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
N +++ K+D A+ +F ++ TY++++ K + L A L+
Sbjct: 337 NILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLV 391
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 176/410 (42%), Gaps = 38/410 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML--- 58
+++AY S D T L+ M G P T+N+L+ R++ + + +E+
Sbjct: 95 VVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELKSKV 154
Query: 59 -------------------------------EMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
E G+ P+V Y +L+ + G A
Sbjct: 155 VLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKN 214
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
+F M L P T+++++NG K +M+ +++ G VP YN LI C
Sbjct: 215 LFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYC 274
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
G + A + E+ + G A +TY ++ R +K+ ++++ + + G + +
Sbjct: 275 NDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIV 334
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y +I F + ++ A Q+ + G+ +V+YNTLI Y K L A L+ EM
Sbjct: 335 TYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEM 394
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
E++ K T+TILID + + + A M K G ++ Y+ ++ L G +
Sbjct: 395 EERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNM 454
Query: 328 DHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
A +F+S+ +S Y++M+H CK A +LL ++SG+
Sbjct: 455 KEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGM 504
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 154/373 (41%), Gaps = 40/373 (10%)
Query: 34 YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
Y++++ + +L L M+ G P ++N+L+ L + D+A +F ++
Sbjct: 92 YDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELK 151
Query: 94 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 153
+ +F IM+ G C+ Y R+ L++ G P +V Y LI G CK G +
Sbjct: 152 -SKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVM 210
Query: 154 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
A+ + ++ G PN TY+ +M F+ + G ++ MKR G + + Y +I
Sbjct: 211 LAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ + G + +A +M G+ +++YN LI C+ K A L+ ++ K G
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
+ T+ ILI+G C + A + G L YN ++ K + A+++
Sbjct: 331 PNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDL 390
Query: 334 FESME---------------------------------------VKDSFTYSSMVHNLCK 354
+ ME V D +TYS ++H LC
Sbjct: 391 VKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCV 450
Query: 355 AKRLPSASKLLLS 367
+ ASKL S
Sbjct: 451 HGNMKEASKLFKS 463
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 35/214 (16%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE- 59
+LI+ +C D+ + N+++ +G+SP +VTYN+LIAG ++ L+ +LDL+ EM E
Sbjct: 338 ILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEER 397
Query: 60 ----------------------------------MGIPPDVWSYNSLMHCLFQLGKPDEA 85
G+ PDV++Y+ L+H L G EA
Sbjct: 398 CIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEA 457
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+++F+ + L P + +N M++G CK + ALR+ + + G VP + ++ I
Sbjct: 458 SKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGL 517
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
LC+ + + A +L ++ +SG P+ Y + K
Sbjct: 518 LCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHK 551
>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 208/423 (49%), Gaps = 29/423 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAG---ISPDVVTYNSLIAGATRNSLLSCSLDLLDEM- 57
LID +C+ + +L +R + PD+V++NSL G ++ + +LDE+
Sbjct: 97 LIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSK-------MKMLDEVF 149
Query: 58 LEMGI-----PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 112
+ MG+ P+V +Y++ + + G+ A + F M L+P TF +++G C
Sbjct: 150 VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYC 209
Query: 113 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
K + A+ +++ +++ +VTY LI G CK G ++ A + + + PN++
Sbjct: 210 KAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSL 269
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
YTTI+ F+ ++ L+ M +G D Y +I+ G+LKEAT+ +E M
Sbjct: 270 VYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDM 329
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
+ D+V + T++N Y K G+++AA + ++ ++GFE D + +IDG+ K G +
Sbjct: 330 EKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQL 389
Query: 293 KGARLH--LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYS 346
A ++ +E N + Y ++D L K+G +F E+ V D F Y+
Sbjct: 390 HEAIVYFCIEKANDV-------MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYT 442
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
S + LCK L A KL ++ G+ + A ++ GL G EA+++ ++ +
Sbjct: 443 SWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNS 502
Query: 407 KIS 409
IS
Sbjct: 503 GIS 505
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 184/386 (47%), Gaps = 8/386 (2%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
L+R+R++ PD T N I ++ SL L ++ G P S+NS++ +
Sbjct: 8 FLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVC 67
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ-KHGFV--P 134
+LG+ A + M P ++N +++G C+N +A + L+ HGF+ P
Sbjct: 68 KLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKP 127
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
++V++N L G K L ++ + +PN +TY+T + ++ + +L L+
Sbjct: 128 DIVSFNSLFNGFSKMKMLDEV-FVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSF 186
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
+MKR + + + +I + K G L+ A ++M + L++V+Y LI+ +CK+
Sbjct: 187 HSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKK 246
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
G+++ A + M + E + +T +IDG + G+ A L M G ++ AY
Sbjct: 247 GEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAY 306
Query: 315 NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
I+ L +GK+ A + E ME V D +++M++ K+ R+ +A + ++
Sbjct: 307 GVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIE 366
Query: 371 SGVRILKSAQKAVVDGLRHSGCRREA 396
G A ++DG+ +G EA
Sbjct: 367 RGFEPDVVALSTMIDGIAKNGQLHEA 392
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 139/315 (44%), Gaps = 5/315 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ + +RM E + P+ + Y ++I G + ++ L +ML G
Sbjct: 239 LIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQG 298
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D+ +Y ++ L GK EA + +DM DL P F M+N K+ A+
Sbjct: 299 MRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAV 358
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M+ L + GF P++V + +I G+ K G+L A N + YT ++
Sbjct: 359 NMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF-----CIEKANDVMYTVLIDAL 413
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + S + G D F Y + IA K G L +A +MV +G+ LD+
Sbjct: 414 CKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDL 473
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y TLI +G + A + DEM G D +LI K GN+ A L
Sbjct: 474 LAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLD 533
Query: 302 MNKIGFDSNLEAYNC 316
M + G + + +C
Sbjct: 534 MQRRGLVTAVSDADC 548
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 125/293 (42%), Gaps = 41/293 (13%)
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
+R A L L S + P+ T + + L L+ L+ + +GYT + +
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME-KQ 270
V++ K+G++K A D + M G + D++SYN+LI+ +C+ G + +A L+L+ +
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 271 GFEC------------------------------------DKYTHTILIDGLCKAGNIKG 294
GF C + T++ ID CK+G ++
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQL 181
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EVKDSF---TYSSMVH 350
A M + N+ + C++D K G ++ A+++++ M V+ S TY++++
Sbjct: 182 ALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALID 241
Query: 351 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
CK + A ++ ++ V ++DG G A K +K+
Sbjct: 242 GFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKM 294
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 115/272 (42%), Gaps = 40/272 (14%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I C I+ M ++ + PD+V + +++ ++ + ++++ +++E
Sbjct: 308 VIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIER 367
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV + ++++ + + G+ EA F D+ + ++++ LCK
Sbjct: 368 GFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDV-----MYTVLIDALCKEGDFIEV 422
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+F + + G VP+ Y I GLCK G L A
Sbjct: 423 ERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDA------------------------- 457
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ + M ++G D Y T+I G + EA ++M+ G+ D
Sbjct: 458 ----------FKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPD 507
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
++ LI Y KEG + AA LL +M+++G
Sbjct: 508 SAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 68/133 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LIDA C+ F + +++ EAG+ PD Y S IAG + L + L M++
Sbjct: 408 VLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQE 467
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ D+ +Y +L++ L G EA +VF +M+ ++P +A F++++ K A
Sbjct: 468 GLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAA 527
Query: 121 LRMFRGLQKHGFV 133
+ +Q+ G V
Sbjct: 528 SDLLLDMQRRGLV 540
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 206/451 (45%), Gaps = 60/451 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE- 59
+++ C+ D +L ++RE+G+ +V+TY+ +I G + S + +L++ M
Sbjct: 78 IVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSG 137
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G PDV ++NSL+ L + EA +F+ M P +++ +L+GLCK D
Sbjct: 138 GGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDE 197
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA------------------------ 155
A R++ + + VP+LV Y + GLCKA R+ A
Sbjct: 198 ACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIG 257
Query: 156 ------------RWILKELGDSG----------------HAPNAITYTTIMKCCFRNRKY 187
+++ L SG H P+A + T++ ++++
Sbjct: 258 ILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRL 317
Query: 188 KLGLEILSAMK--RKGYTFDGF-GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
G+ + MK ++ Y Y ++ K +L EA + + +M G+ D+V+Y
Sbjct: 318 PDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTY 377
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
+ L++ CK GKL+ A LL+EM K+G D +T +++ L KAG + A HLE M
Sbjct: 378 SALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKA 437
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPS 360
G +L YN ++D L K G+ID AI M D F+Y+ ++ LC++ +
Sbjct: 438 RGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAG 497
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
A + +K GV +++DGL +G
Sbjct: 498 AHAIFQEMVKRGVLPDTVLYHSLLDGLARNG 528
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 197/433 (45%), Gaps = 25/433 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+DA + + Y +M+ G PD TY+ ++ G + L + +LL ++ E G
Sbjct: 44 FLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESG 103
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNA 120
+ +V +Y+ ++ + + D+A +F+ M G P TFN +L GLC A
Sbjct: 104 VKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEA 163
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + K G P +++Y+ L+ GLCKAGRL A + +E+ + P+ + YT+ +
Sbjct: 164 FVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTG 223
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM----------- 229
+ + + M KG D + TVI K G +EA + M
Sbjct: 224 LCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLD 283
Query: 230 ------EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK-QGFECDK--YTHT 280
E+M++ +NTLI+ CK +L LL M+ + F C T+
Sbjct: 284 EACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYN 343
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 338
I++D LCKA + A+ + M G ++ Y+ +VD L K GK+D A ++ E M
Sbjct: 344 IMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKE 403
Query: 339 --VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
DSFT +S+++ L KA ++ A L + G ++DGL +G EA
Sbjct: 404 GVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEA 463
Query: 397 KKIQSKIRMAKIS 409
+K+ AK +
Sbjct: 464 ITFLAKMVAAKCT 476
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 162/338 (47%), Gaps = 10/338 (2%)
Query: 35 NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 94
N +I R+ +L + +EM+ PP +N+L+H + + + + +FQ M
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKS 329
Query: 95 GD---LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
P T+NIM++ LCK + D A + + +G P++VTY+ L+ GLCK G+
Sbjct: 330 MKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGK 389
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
L A +L+E+ G P++ T +I+ + K L L MK +G T D Y T
Sbjct: 390 LDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNT 449
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
++ K GR+ EA ++ +MV D+ SY +I C+ G+ A+ + EM K+G
Sbjct: 450 LLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRG 509
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
D + L+DGL + G L LE + + + ++D L K GK + A
Sbjct: 510 VLPDTVLYHSLLDGLARNGL---EDLALELLKTSLCKPDFVMHKMVLDGLCKAGKAEDAC 566
Query: 332 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
V E M D+FTY S+V L K ++ A +L+
Sbjct: 567 EVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLV 604
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 180/394 (45%), Gaps = 25/394 (6%)
Query: 23 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 82
R+ G V TYN + + + + + +M G PPD ++Y+ ++ L + G+
Sbjct: 30 RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGEL 89
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG-FVPELVTYNI 141
D+A + + + T++++++G CK D+AL +F+ + G VP++VT+N
Sbjct: 90 DKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNS 149
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
L+KGLC R+ A + + + +G PN I+Y+T++ + + + M K
Sbjct: 150 LLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKS 209
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
D Y + + K R+ EA D +MVT G + D V+++T+I + CK+G E A
Sbjct: 210 CVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ 269
Query: 262 L----------LLDEMEKQGFECDKYTH-------TILIDGLCKAGNIKGARL---HLEY 301
+LDE K E H LI +CK+ + L ++
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKS 329
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M + NLE YN +VD L K ++D A + M D TYS++V LCK +
Sbjct: 330 MKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGK 389
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
L A LL K GV ++++ L +G
Sbjct: 390 LDRACDLLEEMSKEGVFPDSFTDASILNALSKAG 423
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 199/463 (42%), Gaps = 63/463 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
++ID C+ D I M G PDVVT+NSL+ G +S + L + M +
Sbjct: 113 VVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAK 172
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G P+V SY++L+ L + G+ DEA R++++M+ P + + GLCK
Sbjct: 173 AGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAE 232
Query: 120 ALRMFRGLQKHGFVPELVTY-----------------NILIKGLCKAGRLRTARWILKEL 162
A R + G + V + N +I+ LC++G L A +E+
Sbjct: 233 ACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEM 292
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGL------------------------------- 191
H P+A + T++ ++++ G+
Sbjct: 293 ISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKA 352
Query: 192 -------EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
E+++ M G + D Y ++ K+G+L A D +E+M +GV D +
Sbjct: 353 KQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTD 412
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
+++N K GK++ A L+ M+ +G D T+ L+DGLCKAG I A L M
Sbjct: 413 ASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVA 472
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPS 360
++ +Y I+ L + G+ A +F+ M + D+ Y S++ L +
Sbjct: 473 AKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDL 532
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A +LL + L ++ K V+DGL +G +A ++ ++
Sbjct: 533 ALELLKTSLCKPDFVM---HKMVLDGLCKAGKAEDACEVVERM 572
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 146/298 (48%), Gaps = 6/298 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMR---EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
LI A C+ G + RM+ E P++ TYN ++ + L + +L++EM
Sbjct: 307 LIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMA 366
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G+ PDV +Y++L+ L +LGK D A + ++M + P + T +LN L K D
Sbjct: 367 NYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVD 426
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
AL ++ G P+LVTYN L+ GLCKAGR+ A L ++ + P+ +YT I+
Sbjct: 427 YALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIII 486
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
R+ + I M ++G D Y +++ + G A +E + T +
Sbjct: 487 TALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLA---LELLKTSLCK 543
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
D V + +++ CK GK E A +++ M GF D +T+ ++ GL K G + AR
Sbjct: 544 PDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKAR 601
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 137/266 (51%), Gaps = 3/266 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D C+ D ++N M G+SPDVVTY++L+ G + L + DLL+EM +
Sbjct: 344 IMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKE 403
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD ++ S+++ L + GK D A + M TP T+N +L+GLCK D A
Sbjct: 404 GVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEA 463
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + P++ +Y I+I LC++G+ A I +E+ G P+ + Y +++
Sbjct: 464 ITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDG 523
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
RN L LE+L K D + V+ K G+ ++A + +E+M G D
Sbjct: 524 LARNGLEDLALELLKTSLCKP---DFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPAD 580
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDE 266
+Y ++++ K GK++ A L+D+
Sbjct: 581 AFTYISVVSGLRKLGKVDKARQLVDD 606
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+ D T L +M A +PDV +Y +I R+ + + + EM++ G
Sbjct: 450 LLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRG 509
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD Y+SL+ L + G D A + + +C P ++L+GLCK ++A
Sbjct: 510 VLPDTVLYHSLLDGLARNGLEDLALELLKTSLC---KPDFVMHKMVLDGLCKAGKAEDAC 566
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
+ + GF + TY ++ GL K G++ AR ++ + ++
Sbjct: 567 EVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDDASET 610
>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
Length = 721
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 165/358 (46%), Gaps = 4/358 (1%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
TYN LI + + L EM GI P V +YN+++H L + + + A F +M
Sbjct: 310 TYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEM 369
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
L P T+N +LN CK AL + L++ G P ++TYN LI G C+ G L
Sbjct: 370 RAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDL 429
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
AR + +E+ + G P+ TYT +M + R + E M KG D F Y T
Sbjct: 430 AEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTR 489
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I A + + A E M+ G+ D V+YN +I+ CK G L+ A L +M G
Sbjct: 490 ICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGL 549
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
+ D T+T LI C+ G ++ AR L M G ++ Y +V + G + A
Sbjct: 550 QPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYG 609
Query: 333 VFESM-EV---KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
F M +V + TY+ ++H LC R P A + L+ G+ K ++DG
Sbjct: 610 WFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDG 667
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 164/370 (44%), Gaps = 4/370 (1%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M GI P VVTYN++I G + + EM MG+ PDV +YNSL++ + G
Sbjct: 334 MENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGN 393
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
EA + D+ L P T+N +++G C+ A R+ + + G P++ TY I
Sbjct: 394 LKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTI 453
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
L+ G K L AR E+ G P+ Y T + + ++ M KG
Sbjct: 454 LMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKG 513
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
D Y +I K G LK+A +MV+DG+Q D ++Y LI+ +C+ G L A
Sbjct: 514 IYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREAR 573
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
LL+ M G + T+TIL+ C+ GN+ A M +G + N YN ++ L
Sbjct: 574 KLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHAL 633
Query: 322 GKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
G+ A F M + +TY+ ++ C+ A +L ++G+
Sbjct: 634 CMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDY 693
Query: 378 SAQKAVVDGL 387
A+ G
Sbjct: 694 CTHNALFKGF 703
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 158/337 (46%), Gaps = 38/337 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ + M E G PDV TY L+ G+ + L+ + + DEML G
Sbjct: 419 LIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKG 478
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD ++YN+ + L A ++ + M+ + P T T+N++++GLCK +A
Sbjct: 479 LQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAK 538
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + G P+ +TY LI C+ G LR AR +L + G P+ +TYT ++ C
Sbjct: 539 RLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTC 598
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R G L A + +M+ G++ +
Sbjct: 599 CRR-----------------------------------GNLYSAYGWFRKMLDVGIEPNE 623
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLE 300
++YN LI+ C G+ A+ EM ++G +KYT+T+LIDG C+ GN A RL+ E
Sbjct: 624 ITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFE 683
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M++ G + +N + +G + HAI E++
Sbjct: 684 -MHQNGIPPDYCTHNALFKGF-DEGHMYHAIEYMENI 718
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 178/380 (46%), Gaps = 7/380 (1%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G++PDV N ++ + + EML++ + P + +YN+L+ + G+ DEA
Sbjct: 197 GVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEA 256
Query: 86 NRVFQDMIC--GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+ + ++M G + TFN++++ L + + +NA+++ ++ TYN LI
Sbjct: 257 SMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASSF-TYNPLI 315
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
L + G +R A + E+ + G P +TY I+ + + + + M+ G
Sbjct: 316 TALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLL 375
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y +++ + K G LKEA + + G+ +++YNTLI+ YC+ G L A L
Sbjct: 376 PDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRL 435
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
+EM +QG D T+TIL++G K N+ AR + M G + AYN +
Sbjct: 436 KEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELT 495
Query: 324 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 379
A + E M +K D+ TY+ ++ LCK L A +L + G++
Sbjct: 496 LSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCIT 555
Query: 380 QKAVVDGLRHSGCRREAKKI 399
++ G REA+K+
Sbjct: 556 YTCLIHAHCERGLLREARKL 575
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 150/357 (42%), Gaps = 42/357 (11%)
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
F+ + C + P N +L L D+ ++ + + P +VTYN L+
Sbjct: 189 AFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFL 248
Query: 148 KAGRLRTARWILKELGDS--GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
K GR A +LKE+ G + N +T+ ++ R + ++++ +M R
Sbjct: 249 KEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSM-RLSKKAS 307
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ--------------------------- 238
F Y +I A ++ G +++A +M +G+
Sbjct: 308 SFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFA 367
Query: 239 --------LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
D+++YN+L+N YCK G L+ A LL ++ + G T+ LIDG C+ G
Sbjct: 368 EMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLG 427
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 346
++ AR E M + G ++ Y +++ K + A F+ M K D F Y+
Sbjct: 428 DLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYN 487
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ + P A +L + G+ ++DGL +G ++AK++++K+
Sbjct: 488 TRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKM 544
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ + + +M G+ PD +TY LI LL + LL+ M+
Sbjct: 523 VIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSD 582
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P V +Y L+H + G A F+ M+ + P T+N++++ LC T A
Sbjct: 583 GLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLA 642
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
R F + + G P TY +LI G C+ G A + E+ +G P+ T+ + K
Sbjct: 643 FRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFK 701
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 148/293 (50%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
G+ + +M+ G+ P++ TYNSLI R+ LS + + DE+ + G+ + +YN L+
Sbjct: 196 GFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIG 255
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
L + G+ +A + + M + P T TFN++++GLC D AL L+ G P
Sbjct: 256 GLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCP 315
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
LVTYNILI G K G +++E+ D G +P+ +TYT +M R+ + E+
Sbjct: 316 TLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMF 375
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
MKR G D Y +I G + EA+ + MV +Q + V YNT+IN YCKE
Sbjct: 376 HLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKE 435
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
A L+EM K G + ++ I LCK G A+ L+ M + G
Sbjct: 436 CNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGL 488
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 178/381 (46%), Gaps = 6/381 (1%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
I A+C+ + G+ +L +M G+SP+V Y LI RN + + + M ++G+
Sbjct: 114 IKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGL 173
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
+ + Y +++ F+ G + ++Q M + P T+N ++ C++ A +
Sbjct: 174 AANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFK 233
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+F + K G VTYNILI GLC+ G++ A +L+ + + P T+ +M
Sbjct: 234 VFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLC 293
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ L L +K G Y +I+ F K+G ++ + +M G+ V
Sbjct: 294 NTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKV 353
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
+Y L+N + + +E AY + M++ G D++T+ +LI GLC GN+ A + M
Sbjct: 354 TYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSM 413
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKAKR 357
++ N YN +++ K+ A+ E M VK+ T Y S + LCK +
Sbjct: 414 VEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEM-VKNGVTPNVASYISTIQILCKDGK 472
Query: 358 LPSASKLLLSCLKSGVRILKS 378
A +LL ++G++ +S
Sbjct: 473 SIEAKRLLKEMTEAGLKPPES 493
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 175/381 (45%), Gaps = 4/381 (1%)
Query: 30 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 89
DV ++ I N +S +LL +M MG+ P+V+ Y L+ + G D+A +F
Sbjct: 106 DVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMF 165
Query: 90 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
M L + IM+NG K Y + +++ ++ G +P L TYN LI C+
Sbjct: 166 SRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRD 225
Query: 150 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 209
G+L A + E+ G A NA+TY ++ R + +L MKR +
Sbjct: 226 GKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTF 285
Query: 210 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
++ G+L +A Y+E++ G+ +V+YN LI+ + K G L+ EME
Sbjct: 286 NMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMED 345
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 329
+G K T+TIL++ ++ +I+ A M +IG + Y ++ L G +
Sbjct: 346 RGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVE 405
Query: 330 AINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 385
A +++SM + Y++M++ CK A K L +K+GV ++ + +
Sbjct: 406 ASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQ 465
Query: 386 GLRHSGCRREAKKIQSKIRMA 406
L G EAK++ ++ A
Sbjct: 466 ILCKDGKSIEAKRLLKEMTEA 486
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 158/375 (42%), Gaps = 40/375 (10%)
Query: 35 NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 94
+++I + ++ LL SLD M+ G P +S+N+ + L + G D F + +
Sbjct: 42 DAVINASLQSQLLEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYL- 100
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
G +F I + C+N + ++ G P + Y ILI+ C+ G +
Sbjct: 101 GRTQFDVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQ 160
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
A+ + + D G A N YT ++ F+ K G E+ MK G + + Y ++I
Sbjct: 161 AKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLIT 220
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
+ + G+L A +++ GV + V+YN LI C++G++ A LL+ M++
Sbjct: 221 EYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINP 280
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK-------- 326
T +L+DGLC G + A +LE + IG L YN ++ K G
Sbjct: 281 TTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELV 340
Query: 327 ---------------------------IDHAINVFESME----VKDSFTYSSMVHNLCKA 355
I+ A +F M+ V D TY ++H LC
Sbjct: 341 REMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIK 400
Query: 356 KRLPSASKLLLSCLK 370
+ ASKL S ++
Sbjct: 401 GNMVEASKLYKSMVE 415
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 125/273 (45%), Gaps = 35/273 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ +L RM+ A I+P T+N L+ G L +L L+++ +
Sbjct: 252 ILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLI 311
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P + +YN L+ ++G + + ++M ++P T+ I++N ++ + A
Sbjct: 312 GLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKA 371
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
MF +++ G VP+ TY +LI GLC G + A + K + + PN + Y T++
Sbjct: 372 YEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMIN- 430
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
GYC ++ +A ++E+MV +GV +
Sbjct: 431 ---------------------------GYCKECNSY-------KALKFLEEMVKNGVTPN 456
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ SY + I + CK+GK A LL EM + G +
Sbjct: 457 VASYISTIQILCKDGKSIEAKRLLKEMTEAGLK 489
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 87/169 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + + + ++ M + GISP VTY L+ R+ + + ++ M +
Sbjct: 322 ILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRI 381
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD +Y L+H L G EA+++++ M+ L P +N M+NG CK + A
Sbjct: 382 GLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKA 441
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 169
L+ + K+G P + +Y I+ LCK G+ A+ +LKE+ ++G P
Sbjct: 442 LKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 190/412 (46%), Gaps = 9/412 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+DA + A + + MR+AG+ P+V TYN LI +N + + +LDEM G
Sbjct: 75 LLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKG 134
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD S+ +++ + +LG+ +EA + + P A++N +++ LC
Sbjct: 135 CHPDEVSHGTIVSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHALCGEFRMWEVF 189
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P +VTY ++ CKA LR A IL + G PN +T+T ++K
Sbjct: 190 SVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGF 249
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F + K L + M +G+ Y +I IG LK A D+ M + + +
Sbjct: 250 FEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNA 309
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y+TL++ + G L+ A L+ +EM+ G + + +T +ID LCK A ++
Sbjct: 310 TTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDK 369
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M N +N ++ RL G++ A+NVF M + TY+ ++H L +
Sbjct: 370 MLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGN 429
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
A +++ L +G + V++ L R+ A + ++ + I
Sbjct: 430 HKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQ 481
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 164/365 (44%), Gaps = 35/365 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ A C ++++N M + G+ P+VVTY +++ + L + +L M+ MG
Sbjct: 175 VVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMG 234
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V ++ +L+ F+ GK +A ++ M+ P T ++N+++ GLC AL
Sbjct: 235 CTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGAL 294
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT----- 176
F ++++ +P TY+ L+ G AG L A I E+ SG PN + YT
Sbjct: 295 DFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVL 354
Query: 177 ----------------IMKCCFRNR--------------KYKLGLEILSAMKRKGYTFDG 206
+M C N + L + M+R G +
Sbjct: 355 CKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPND 414
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y ++ + G K+A + +M+ +G +L +V+YNT+IN C+ + A LLL
Sbjct: 415 RTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGR 474
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M QG + D +T +I CK G + A L MN + N+ AY ++ L GK
Sbjct: 475 MMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGK 534
Query: 327 IDHAI 331
+ +A+
Sbjct: 535 LSNAM 539
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 180/399 (45%), Gaps = 10/399 (2%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGI-SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
I A+ + S D R + G P V YN L+ R +++ + + D M + G
Sbjct: 40 IGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAG 99
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V++YN L+ L Q + D A ++ +M P + +++G+CK + A
Sbjct: 100 VDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA- 158
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
RG VP +YN ++ LC R+ ++ E+ G PN +TYTTI+
Sbjct: 159 ---RGFLAET-VPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAF 214
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R+ ++ IL+ M G T + + ++ F + G++ +A MV +G
Sbjct: 215 CKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPST 274
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+SYN LI C G L+ A + M++ + T++ L+DG AG++ GA L
Sbjct: 275 ISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNE 334
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M G N+ Y ++D L K D A ++ + M + ++ T+++++ LC R
Sbjct: 335 MKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGR 394
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ A + ++G ++ GL G ++A
Sbjct: 395 VGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDA 433
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 183/399 (45%), Gaps = 34/399 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG-------------------- 40
+LI A CQ DA +L+ M G PD V++ ++++G
Sbjct: 109 LLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPV 168
Query: 41 -ATRNSLLSC---------SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 90
A+ N+++ +++EM++ G+ P+V +Y +++ + + A +
Sbjct: 169 QASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILA 228
Query: 91 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 150
M+ TP TF ++ G ++ +AL M+ + G+ P ++YN+LI+GLC G
Sbjct: 229 RMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIG 288
Query: 151 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
L+ A + + PNA TY+T++ + I + MK G + Y
Sbjct: 289 DLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYT 348
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
+I K +A +++M+ D + V++NTLI C G++ A + M +
Sbjct: 349 NMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRN 408
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
G + T+ L+ GL + GN K A + M GF+ +L YN +++ L + HA
Sbjct: 409 GCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHA 468
Query: 331 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
+ + M V+ D+FT+++++H CK ++ A+ LL
Sbjct: 469 MLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLL 507
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 136/302 (45%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + M + G +P ++YN LI G L +LD + M + P+ +Y++L+
Sbjct: 260 SMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGF 319
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
G D A ++ +M P + M++ LCK D A + + P
Sbjct: 320 SNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNT 379
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
VT+N LI LC GR+ A + + +G PN TY ++ FR +K ++
Sbjct: 380 VTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIE 439
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M G+ Y TVI ++ K A + +M+ G+Q D ++N +I+ YCKEGK
Sbjct: 440 MLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGK 499
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+ A LL +M + +TILI LC G + A ++L M G N +N
Sbjct: 500 VSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNV 559
Query: 317 IV 318
+V
Sbjct: 560 LV 561
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 138/286 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C N M+ + P+ TY++L+ G + L ++ + +EM
Sbjct: 279 VLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSS 338
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V Y +++ L + D+A + M+ + P T TFN ++ LC A
Sbjct: 339 GCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRA 398
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F G++++G P TYN L+ GL + G + A ++ E+ ++G + +TY T++ C
Sbjct: 399 LNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINC 458
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + +L M +G D F + +I A+ K G++ A + QM +
Sbjct: 459 LCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRN 518
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+V+Y LI+ C +GKL A + L +M +G ++ T +L+ +
Sbjct: 519 VVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAI 564
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 78/183 (42%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + + MR G P+ TYN L+ G R + ++ EML G
Sbjct: 385 LIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNG 444
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ +YN++++CL Q+ A + M+ + P TFN +++ CK A
Sbjct: 445 FELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAA 504
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +V Y ILI LC G+L A L ++ G PN T+ +++
Sbjct: 505 CLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAI 564
Query: 182 FRN 184
F N
Sbjct: 565 FTN 567
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ CQ +L RM GI PD T+N++I + +S + LL +M +
Sbjct: 455 VINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVN 514
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P +V +Y L+ L GK A M+ + P AT+N+++ + N T +
Sbjct: 515 CPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTIGPI 574
Query: 122 RMFR 125
+F+
Sbjct: 575 HLFK 578
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 189/399 (47%), Gaps = 5/399 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D +C+ S D + +L+ + G+ + YNSL+ TR LL EM
Sbjct: 153 VVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENR 212
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P V +Y L+ L + G + V+ +M ++ ++ ++N C+ A
Sbjct: 213 GVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRA 272
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F HG P TY LI G CK G++ A +L ++ G N I + T++
Sbjct: 273 SEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDG 332
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R+ + LEI + M++ G D + Y T+ ++ R+++A + M GV +
Sbjct: 333 YCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPN 392
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
VSY TLI+++ KEG + A L +ME +G T+ ++IDG K G+I+ A +
Sbjct: 393 YVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKK 452
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAK 356
M K G ++ Y +V +GK+D A+ +FE M+ + + Y+++V L K
Sbjct: 453 EMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEG 512
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
R A +L L +G+ + +V L H+ R++
Sbjct: 513 RSEEAFQLYDDMLAAGLTPDDTLYSVLVGSL-HTDSRKD 550
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
V+ F K G + +A ++++ GV L+ YN+L++ Y ++ +A LL EME +G
Sbjct: 154 VVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRG 213
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
E T+TIL+DGL +AG+I + M + ++ Y+ +++ + G + A
Sbjct: 214 VEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRAS 273
Query: 332 NVFES-----MEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
VF+ +E + TY ++++ CK ++ +A LL GV + ++DG
Sbjct: 274 EVFDECVGHGVEPNER-TYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDG 332
Query: 387 LRHSGCRREAKKIQS 401
G +A +I++
Sbjct: 333 YCRHGMVEKALEIKA 347
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 92/196 (46%), Gaps = 5/196 (2%)
Query: 220 GRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
G+L A D + + + + +S + +++ +CK G ++ A+ LLDE+ + G +
Sbjct: 126 GQLPAAADLLGKAIASCPASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACC 185
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+ L+D + N L+ M G + + Y +VD L + G I V++ M+
Sbjct: 186 YNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMK 245
Query: 339 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
K D + YS++++ C+ + AS++ C+ GV + A+++G G
Sbjct: 246 RKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIE 305
Query: 395 EAKKIQSKIRMAKISH 410
A+ + + +++ + H
Sbjct: 306 AAEMLLADMQLRGVGH 321
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 38/87 (43%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ +C D + M+ G P+VV Y +L++G + + L D+ML G
Sbjct: 469 LVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAG 528
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRV 88
+ PD Y+ L+ L + D R
Sbjct: 529 LTPDDTLYSVLVGSLHTDSRKDPLPRT 555
>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 827
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 173/368 (47%), Gaps = 4/368 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+A+C ++ M + I P +V+Y SLI G + ++L ++D+ +
Sbjct: 431 ILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGAS 490
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
D Y +L+ G D A ++ ++MIC +L P + ++ G K D A
Sbjct: 491 SCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQA 550
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F + + G P+ + N ++ G C+AG + A +L++ + G N +Y I+
Sbjct: 551 LEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYK 610
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + LE+L M ++ Y T+I+ F K K A + +MV G+ +
Sbjct: 611 LCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFN 670
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I +Y L++++ K+ AY + EM+++G D+ ++T LI G C +K A E
Sbjct: 671 IATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFE 730
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M++ G N+ Y CI+D K +ID A VF+ M + D TY+ ++ K
Sbjct: 731 EMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHG 790
Query: 357 RLPSASKL 364
A KL
Sbjct: 791 YFDQAHKL 798
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 178/430 (41%), Gaps = 43/430 (10%)
Query: 1 MLIDAYCQFVSFDAGY----TILNRMREAGISPDVVTYNSLIAGA--------------- 41
++++ YC V DAG IL ++ +G P VVTY++ I G
Sbjct: 322 IMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRN 381
Query: 42 ---TRNSLLSCS-----------------LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
T L S S L +L+EM GI PDV+SY+ L++ G
Sbjct: 382 LHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGD 441
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
+ + ++M + P ++ +++GLCK NA+ +F + + Y
Sbjct: 442 VMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYET 501
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
LI G C G + +A +L+E+ + P A + ++++ ++ + LE+ +AM R G
Sbjct: 502 LIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDG 561
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
D ++ + G KEA +E G L+ SYN +I CKEG E A
Sbjct: 562 IWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERAL 621
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
LL M K+ ++ LI G K N K A M K+G N+ Y ++
Sbjct: 622 ELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIF 681
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
K+ A +F+ M+ + D +Y++++ C + + A L + G
Sbjct: 682 SHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNV 741
Query: 378 SAQKAVVDGL 387
++DG
Sbjct: 742 ITYTCIIDGF 751
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 177/383 (46%), Gaps = 14/383 (3%)
Query: 32 VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 91
V ++ LI+ NS+L +LD+ +G+ PD+ + N L+ CL + + + RVF++
Sbjct: 248 VVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEE 307
Query: 92 MICGDLTPCTATFNIMLNGLCKNRYTDNALR----MFRGLQKHGFVPELVTYNILIKGLC 147
+ +P T+ IM+N C + D +R + + + G P +VTY+ I GLC
Sbjct: 308 LKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLC 367
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYT-TIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
K G + A +++ L + N+ ++ I C R ++ L++L MK G D
Sbjct: 368 KVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFE-ALQVLEEMKSSGILPDV 426
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ Y +I AF G + + D ME+M ++ IVSY +LI+ CK+ L+ A +
Sbjct: 427 YSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHS 486
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC--IVDRLGKD 324
+ + D + LIDG C G++ A LE M I + A++C ++ K
Sbjct: 487 IGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEM--ICNELVPTAFSCRSLIRGYYKL 544
Query: 325 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
G D A+ VF +M D+ + ++ C+A A LL + G + +
Sbjct: 545 GLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSY 604
Query: 381 KAVVDGLRHSGCRREAKKIQSKI 403
A++ L G A ++ ++
Sbjct: 605 NAIIYKLCKEGYPERALELLPRM 627
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 103/267 (38%), Gaps = 58/267 (21%)
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
HGF + + I++ AG +R W L L D N Y T +
Sbjct: 186 HGFSHSISCFRIIVHAFALAG-MRLEVWAL--LRDIVGFCNEAKYDTF-------ELFSA 235
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
L+ ++R G FD +I+ F L+ A D G++ DI + N L+
Sbjct: 236 FLDSPQHVERSGVVFD-----VLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLK 290
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL--------------------------- 282
+ ++E + +E++ +G + YT+TI+
Sbjct: 291 CLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRS 350
Query: 283 ------------IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
I GLCK GN++ A + + ++ N ++N ++ K G++ A
Sbjct: 351 GEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEA 410
Query: 331 INVFESME----VKDSFTYSSMVHNLC 353
+ V E M+ + D ++YS +++ C
Sbjct: 411 LQVLEEMKSSGILPDVYSYSILINAFC 437
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 172/342 (50%), Gaps = 4/342 (1%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
+P ++ +N +++ + S +L L +M GI D +++N L++C QLG +
Sbjct: 67 TPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFS 126
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
VF ++ P TFN ++ GLC + AL + GF + V+Y LI GLC
Sbjct: 127 VFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLC 186
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K GR+ A +LK + PNA+ Y I+ + + ++ S M K + D F
Sbjct: 187 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDF 246
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
++I F +G+LKEA + +M+ + + + +++ L++ +CKEGK++ A ++L
Sbjct: 247 TCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVT 306
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
K+ D T+ L+DG C I A+ + M G +N+++Y +++ L K +
Sbjct: 307 MKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMV 366
Query: 328 DHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
D A+N+FE M + + TY+S++ L K ++ KL+
Sbjct: 367 DEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLV 408
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 194/408 (47%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ + Q +++ ++ + G P+ +T+N+LI G + +L+ D+++
Sbjct: 110 ILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQ 169
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D SY +L++ L ++G+ A ++ + + + P +N++++ +CK + ++A
Sbjct: 170 GFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDA 229
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + P+ T N LI G C G+L+ A +L ++ P T++ ++
Sbjct: 230 FDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDA 289
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K K +L +K D Y +++ + + + +A D + M + GV +
Sbjct: 290 FCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIAN 349
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ SY T+IN CK ++ A L +EM + + T+ LIDGL K G I ++
Sbjct: 350 VQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVD 409
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M+ G N+ YN I+D L K+ +D AI + +++ + D +TY+ ++ LC++
Sbjct: 410 EMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSG 469
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+L A K+ L G + ++ G G A + SK+
Sbjct: 470 KLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKME 517
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 150/320 (46%), Gaps = 39/320 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M+ID C+ + + + ++M ISPD T NSLI G L ++ LL +M+
Sbjct: 215 MIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILE 274
Query: 61 GIPP-----------------------------------DVWSYNSLM--HCLFQLGKPD 83
I P DV +YNSLM +CL + + +
Sbjct: 275 NINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVK--EIN 332
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+A +F M + ++ M+NGLCK + D A+ +F ++ +P +VTYN LI
Sbjct: 333 KAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLI 392
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
GL K G++ ++ E+ D G PN ITY +I+ +N + +L+ +K +G
Sbjct: 393 DGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIR 452
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D + Y +I + G+L++A E ++ G LD+ +Y +I +C +G +AA L
Sbjct: 453 PDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALAL 512
Query: 264 LDEMEKQGFECDKYTHTILI 283
L +ME G + T+ I+I
Sbjct: 513 LSKMEDNGCIPNAKTYEIVI 532
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 182/388 (46%), Gaps = 14/388 (3%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
+M GI D T+N LI ++ L S S + ++L+ G P+ ++N+L+ L G
Sbjct: 95 QMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKG 154
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
+A ++ ++ ++NGLCK AL++ + + P V YN
Sbjct: 155 HIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYN 214
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK--CCFRNRKYKLGL---EILS 195
++I +CKA + A + ++ +P+ T +++ C K +GL IL
Sbjct: 215 MIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILE 274
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
+ + YTF ++ AF K G++KEA + + + LD+V+YN+L++ YC
Sbjct: 275 NINPRMYTFS-----ILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVK 329
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
++ A + D M +G + ++T +I+GLCK + A E M N+ YN
Sbjct: 330 EINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYN 389
Query: 316 CIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++D LGK GKI + + + M + + TY+S++ LCK + A LL +
Sbjct: 390 SLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQ 449
Query: 372 GVRILKSAQKAVVDGLRHSGCRREAKKI 399
G+R ++ GL SG +A+K+
Sbjct: 450 GIRPDMYTYTVLIKGLCQSGKLEDAQKV 477
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 182/360 (50%), Gaps = 7/360 (1%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
SF+ ++ N ++ + DV ++ LI G + S DLL E+ E G P+V Y
Sbjct: 144 SFNQWWSFFNE-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYT 202
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+L+ + G+ ++A +F +M L T+ +++NGL KN M+ +Q+
Sbjct: 203 TLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQED 262
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G P L TYN ++ LCK GR + A + E+ + G + N +TY T++ R K
Sbjct: 263 GVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEA 322
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+++ MK G + Y T+I F +G+L +A + + G+ +V+YN L++
Sbjct: 323 NKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSG 382
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDS 309
+C++G A ++ EME++G + K T+TILID ++ N+ K +L L M ++G
Sbjct: 383 FCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS-MEELGLVP 441
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
++ Y+ ++ G+++ A +F+SM K + Y++M+ CK A KLL
Sbjct: 442 DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLL 501
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 186/377 (49%), Gaps = 4/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ + + +L + E G SP+VV Y +LI G + + + DL EM ++
Sbjct: 168 ILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKL 227
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + +Y L++ LF+ G + +++ M + P T+N ++N LCK+ T +A
Sbjct: 228 GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDA 287
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F +++ G +VTYN LI GLC+ +L A ++ ++ G PN ITY T++
Sbjct: 288 FQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDG 347
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K L + +K +G + Y +++ F + G A +++M G++
Sbjct: 348 FCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPS 407
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+Y LI+ + + +E A L ME+ G D +T+++LI G C G + A +
Sbjct: 408 KVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFK 467
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAK 356
M + + N YN ++ K+G A+ + + ME K+ +Y M+ LCK +
Sbjct: 468 SMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKER 527
Query: 357 RLPSASKLLLSCLKSGV 373
+ A +L+ + SG+
Sbjct: 528 KSKEAERLVEKMIDSGI 544
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 152/294 (51%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
G+ + +M+E G+ P++ TYN ++ ++ + + DEM E G+ ++ +YN+L+
Sbjct: 252 GFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIG 311
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
L + K +EAN+V M + P T+N +++G C AL + R L+ G P
Sbjct: 312 GLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
LVTYNIL+ G C+ G A ++KE+ + G P+ +TYT ++ R+ + +++
Sbjct: 372 SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
+M+ G D Y +I F G++ EA+ + MV + + V YNT+I YCKE
Sbjct: 432 LSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKE 491
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
G A LL EME++ + ++ +I+ LCK K A +E M G D
Sbjct: 492 GSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGID 545
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 181/374 (48%), Gaps = 5/374 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I++Y Q S + + N M + G P +N L+ +S + +E +
Sbjct: 99 VIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN-KS 157
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ DV+S+ L+ + G+ +++ + ++ +P + +++G CK + A
Sbjct: 158 KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + K G V TY +LI GL K G + + +++ + G PN TY +M
Sbjct: 218 KDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ + K ++ M+ +G + + Y T+I + +L EA ++QM +DG+ +
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++YNTLI+ +C GKL A L +++ +G T+ IL+ G C+ G+ GA ++
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + G + Y ++D + ++ AI + SME V D TYS ++H C
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKG 457
Query: 357 RLPSASKLLLSCLK 370
++ AS+L S ++
Sbjct: 458 QMNEASRLFKSMVE 471
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 91/171 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ M E GI P VTY LI R+ + ++ L M E+
Sbjct: 378 ILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEEL 437
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV +Y+ L+H G+ +EA+R+F+ M+ + P +N M+ G CK + A
Sbjct: 438 GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRA 497
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 171
L++ + +++ P + +Y +I+ LCK + + A +++++ DSG P+
Sbjct: 498 LKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 118/479 (24%), Positives = 211/479 (44%), Gaps = 71/479 (14%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC+ ++ RM + + PD +YN+L+ G R S + +L D+ML+ G
Sbjct: 339 LINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEG 398
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P V +YN+L+ L ++G D+A +++ M+ + P ++ +L+GL K + A
Sbjct: 399 IEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGAS 458
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + GF +T+N +I GLCK G++ A I ++ D G +P+ ITY T++
Sbjct: 459 TLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGY 518
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ AM+R+ + Y ++I+ K RL E TD + +M G+ +I
Sbjct: 519 CKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNI 578
Query: 242 VSYNTLINLYCKEG-----------------------------------KLEAAYLLLDE 266
V+Y LI+ +CKEG +++ A LL+ +
Sbjct: 579 VTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQK 638
Query: 267 MEKQGF----EC----------------------------DKYTHTILIDGLCKAGNIKG 294
M GF EC + + I I GLCK G +
Sbjct: 639 MVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDD 698
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVH 350
AR ++ GF + Y ++ G +D A + + M V + TY+++++
Sbjct: 699 ARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALIN 758
Query: 351 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
LCK++ + A +L + G+ ++DG G A K++ K+ IS
Sbjct: 759 GLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGIS 817
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 183/377 (48%), Gaps = 5/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMRE-AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
+LI YC+ D +L M+E A + PD Y LI G R + ++ LLDEML
Sbjct: 267 LLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLR 326
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+G+ +++ NSL++ + G+ EA V M+ +L P + ++N +L+G C+ +T
Sbjct: 327 LGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 386
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + + + G P ++TYN L+KGLC+ G A I + G AP+ + Y+T++
Sbjct: 387 AFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLD 446
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
F+ ++ + + +G+T + T+I+ K+G++ EA + ++M G
Sbjct: 447 GLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP 506
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D ++Y TLI+ YCK + A+ + ME++ + LI GL K+ + L
Sbjct: 507 DGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLL 566
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
M G N+ Y ++D K+G +D A + + M + S+MV L +
Sbjct: 567 TEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRL 626
Query: 356 KRLPSASKLLLSCLKSG 372
R+ A+ L+ + G
Sbjct: 627 GRIDEANLLMQKMVDHG 643
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 194/407 (47%), Gaps = 13/407 (3%)
Query: 7 CQFVSFDAGYTILNRM----REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
C+F D G I + + RE SP V ++ ++ L +L + D M + G
Sbjct: 98 CKFK--DRGNVIWDELVGVYREFAFSPTV--FDMILKVYVEKGLTKNALYVFDNMGKCGR 153
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P + S NSL++ L + G+ A+ V+Q MI + P +IM+N CK+ D A
Sbjct: 154 IPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAG 213
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ ++ G P +VTY+ LI G G + A+ +LK + + G + N +TYT ++K
Sbjct: 214 FVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYC 273
Query: 183 RNRKYKLGLEILSAMKRKGYTF-DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K ++L M+ + D Y +I + + G++ +A +++M+ G++ ++
Sbjct: 274 KQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNL 333
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
N+LIN YCK G++ A ++ M + D Y++ L+DG C+ G+ A +
Sbjct: 334 FICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDK 393
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M + G + + YN ++ L + G D A+ ++ M + D YS+++ L K +
Sbjct: 394 MLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMEN 453
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
AS L L G + ++ GL G EA++I K++
Sbjct: 454 FEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 500
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 190/443 (42%), Gaps = 40/443 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++A+C+ D + +M G+ P++VTY+SLI G + + +L M E
Sbjct: 197 IMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEK 256
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDN 119
G+ +V +Y L+ + K DEA +V + M L P + ++++G C+ D+
Sbjct: 257 GVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDD 316
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD--------------- 164
A+R+ + + G L N LI G CK G + A ++ + D
Sbjct: 317 AVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLD 376
Query: 165 ----SGHA----------------PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
GH P +TY T++K R + L+I M ++G
Sbjct: 377 GYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAP 436
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D GY T++ K+ + A+ + ++ G +++NT+I+ CK GK+ A +
Sbjct: 437 DEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIF 496
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
D+M+ G D T+ LIDG CKA N+ A M + ++E YN ++ L K
Sbjct: 497 DKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKS 556
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
++ ++ M ++ + TY +++ CK L A ++G+
Sbjct: 557 RRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIIC 616
Query: 381 KAVVDGLRHSGCRREAKKIQSKI 403
+V GL G EA + K+
Sbjct: 617 STMVSGLYRLGRIDEANLLMQKM 639
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 186/402 (46%), Gaps = 15/402 (3%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + M + G P + + NSL+ +N + + +M+ +GI PDV+ + +++
Sbjct: 144 VFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFC 203
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ GK DEA + M + P T++ ++NG + A + + + + G +V
Sbjct: 204 KDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVV 263
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGLEILSA 196
TY +LIKG CK ++ A +L+ + + P+ Y ++ R K + +L
Sbjct: 264 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 323
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M R G + F ++I + K G + EA + +MV ++ D SYNTL++ YC+EG
Sbjct: 324 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 383
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
A+ L D+M ++G E T+ L+ GLC+ G A M K G + Y+
Sbjct: 384 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYST 443
Query: 317 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL-----LS 367
++D L K + A +++ + K T+++M+ LCK ++ A ++ L
Sbjct: 444 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 503
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
C G+ + ++DG + +A K++ + IS
Sbjct: 504 CSPDGI-----TYRTLIDGYCKASNVGQAFKVKGAMEREPIS 540
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 121/307 (39%), Gaps = 67/307 (21%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ + + + M ISP + YNSLI+G ++ L DLL EM G
Sbjct: 514 LIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRG 573
Query: 62 IPPDVWSYNSLM-----------------------------------HCLFQLGKPDEAN 86
+ P++ +Y +L+ L++LG+ DEAN
Sbjct: 574 LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEAN 633
Query: 87 RVFQDMI-------------------------------CGD-LTPCTATFNIMLNGLCKN 114
+ Q M+ C L P +NI + GLCK
Sbjct: 634 LLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKT 693
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D+A R F L GFVP+ TY LI G AG + A + E+ G PN +TY
Sbjct: 694 GKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTY 753
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
++ ++ + + +KG + Y T+I + KIG + A ++M+
Sbjct: 754 NALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIE 813
Query: 235 DGVQLDI 241
+G+ I
Sbjct: 814 EGISPSI 820
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 148/293 (50%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 74
G+ + +M+ G+ P++ TYNSLI R+ LS + + DE+ + G+ + +YN L+
Sbjct: 196 GFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIG 255
Query: 75 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 134
L + G+ +A + + M + P T TFN++++GLC D AL L+ G P
Sbjct: 256 GLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCP 315
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
LVTYNILI G K G +++E+ D G +P+ +TYT +M R+ + E+
Sbjct: 316 TLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMF 375
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
MKR G D Y +I G + EA+ + MV +Q + V YNT+IN YCKE
Sbjct: 376 HLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKE 435
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
A L+EM K G + ++ I LCK G A+ L+ M + G
Sbjct: 436 CNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGL 488
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 178/381 (46%), Gaps = 6/381 (1%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
I A+C+ + G+ +L +M G+SP+V Y LI RN + + + M ++G+
Sbjct: 114 IKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGL 173
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
+ + Y +++ F+ G + ++Q M + P T+N ++ C++ A +
Sbjct: 174 AANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFK 233
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+F + K G VTYNILI GLC+ G++ A +L+ + + P T+ +M
Sbjct: 234 VFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLC 293
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ L L +K G Y +I+ F K+G ++ + +M G+ V
Sbjct: 294 NTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKV 353
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
+Y L+N + + +E AY + M++ G D++T+ +LI GLC GN+ A + M
Sbjct: 354 TYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSM 413
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKAKR 357
++ N YN +++ K+ A+ E M VK+ T Y S + LCK +
Sbjct: 414 VEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEM-VKNGVTPNVASYISTIQILCKDGK 472
Query: 358 LPSASKLLLSCLKSGVRILKS 378
A +LL ++G++ +S
Sbjct: 473 SIEAKRLLKEMTEAGLKPPES 493
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 175/381 (45%), Gaps = 4/381 (1%)
Query: 30 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 89
DV ++ I N +S +LL +M MG+ P+V+ Y L+ + G D+A +F
Sbjct: 106 DVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMF 165
Query: 90 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
M L + IM+NG K Y + +++ ++ G +P L TYN LI C+
Sbjct: 166 SRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRD 225
Query: 150 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 209
G+L A + E+ G A NA+TY ++ R + +L MKR +
Sbjct: 226 GKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTF 285
Query: 210 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
++ G+L +A Y+E++ G+ +V+YN LI+ + K G L+ EME
Sbjct: 286 NMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMED 345
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 329
+G K T+TIL++ ++ +I+ A M +IG + Y ++ L G +
Sbjct: 346 RGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVE 405
Query: 330 AINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 385
A +++SM + Y++M++ CK A K L +K+GV ++ + +
Sbjct: 406 ASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQ 465
Query: 386 GLRHSGCRREAKKIQSKIRMA 406
L G EAK++ ++ A
Sbjct: 466 ILCKDGKSIEAKRLLKEMTEA 486
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 158/375 (42%), Gaps = 40/375 (10%)
Query: 35 NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 94
+++I + ++ LL SLD M+ G P +S+N+ + L + G D F + +
Sbjct: 42 DAVINASFQSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYL- 100
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
G +F I + C+N + ++ G P + Y ILI+ C+ G +
Sbjct: 101 GRTQFDVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQ 160
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
A+ + + D G A N YT ++ F+ K G E+ MK G + + Y ++I
Sbjct: 161 AKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLIT 220
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
+ + G+L A +++ GV + V+YN LI C++G++ A LL+ M++
Sbjct: 221 EYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINP 280
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK-------- 326
T +L+DGLC G + A +LE + IG L YN ++ K G
Sbjct: 281 TTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELV 340
Query: 327 ---------------------------IDHAINVFESME----VKDSFTYSSMVHNLCKA 355
I+ A +F M+ V D TY ++H LC
Sbjct: 341 REMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIK 400
Query: 356 KRLPSASKLLLSCLK 370
+ ASKL S ++
Sbjct: 401 GNMVEASKLYKSMVE 415
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 125/273 (45%), Gaps = 35/273 (12%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ +L RM+ A I+P T+N L+ G L +L L+++ +
Sbjct: 252 ILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLI 311
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P + +YN L+ ++G + + ++M ++P T+ I++N ++ + A
Sbjct: 312 GLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKA 371
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
MF +++ G VP+ TY +LI GLC G + A + K + + PN + Y T++
Sbjct: 372 YEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMIN- 430
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
GYC ++ +A ++E+MV +GV +
Sbjct: 431 ---------------------------GYCKECNSY-------KALKFLEEMVKNGVTPN 456
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ SY + I + CK+GK A LL EM + G +
Sbjct: 457 VASYISTIQILCKDGKSIEAKRLLKEMTEAGLK 489
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 87/169 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + + + ++ M + GISP VTY L+ R+ + + ++ M +
Sbjct: 322 ILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRI 381
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD +Y L+H L G EA+++++ M+ L P +N M+NG CK + A
Sbjct: 382 GLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKA 441
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 169
L+ + K+G P + +Y I+ LCK G+ A+ +LKE+ ++G P
Sbjct: 442 LKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 154/302 (50%)
Query: 20 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 79
+RM G+ P+VV YN+L+ G L ++ + ++M G P+V +Y++L+ +
Sbjct: 340 DRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKA 399
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
G D A+ V+ MI P + M++ LC+N + A + +Q P VT+
Sbjct: 400 GDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTF 459
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
N IKGLC +GR+ A + ++G+SG PN TY ++ ++R++ ++ M+
Sbjct: 460 NTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEH 519
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
+G + Y T+I + G L EA + + +MV G + D ++ N +I+ YCK+GK+
Sbjct: 520 RGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNI 579
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A L+D + + D +T LI G+C ++ A ++L M G N+ +N +V
Sbjct: 580 AIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVR 639
Query: 320 RL 321
L
Sbjct: 640 HL 641
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 188/421 (44%), Gaps = 34/421 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M+I+ D +L +M+ GIS + S+I R +L M +
Sbjct: 81 MMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDF 140
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P V YN ++ L + N ++ +M + P T+NI+L LCKN D A
Sbjct: 141 RVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGA 200
Query: 121 LRMFRGLQKHG------------------------------FVPELVTYNILIKGLCKAG 150
++ + G F P + YN LI G+CK
Sbjct: 201 HKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEY 260
Query: 151 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
A +L E+ + G PN I+YTTI+ +L L +L+ M +G + + +
Sbjct: 261 TFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFT 320
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
++I F G EA D+ ++M+ +GV ++V+YN L++ C + L A + ++ME
Sbjct: 321 SLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEIN 380
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
G + T++ LIDG KAG++ GA +M G N+ AY C+VD L ++ + A
Sbjct: 381 GCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQA 440
Query: 331 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+ E+M+V+ ++ T+++ + LC + R+ A K+ SG + ++D
Sbjct: 441 YCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDS 500
Query: 387 L 387
L
Sbjct: 501 L 501
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 174/376 (46%), Gaps = 4/376 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ +F+ + +L+ M GI P+V++Y ++I + + SL +L +M G
Sbjct: 252 LINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARG 311
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P++ ++ SL+ F G EA + MI + P +N +++GLC R +A+
Sbjct: 312 CSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAV 371
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ +G P + TY+ LI G KAG L A + + G PN + YT ++
Sbjct: 372 SVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVL 431
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
RN + ++ M+ + + + T I GR+ A +QM G +
Sbjct: 432 CRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNT 491
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN L++ K+ + A+ L+ +ME +G E + T+ +I G C AG + A L
Sbjct: 492 TTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGK 551
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M G + N ++D K GK++ AI + + + D Y+S++ +C
Sbjct: 552 MVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIG 611
Query: 358 LPSASKLLLSCLKSGV 373
+ A L L G+
Sbjct: 612 VEEAIVYLRRMLSEGI 627
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 185/445 (41%), Gaps = 44/445 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++DA F I + M++ G+ P+V TYN L+ +N+ + + LL EM G
Sbjct: 152 ILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKG 211
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD SY +L+ L +LGK EA + TP +N ++NG+CK + A
Sbjct: 212 CDPDEVSYTTLISSLCKLGKVKEARE-----LAMSFTPSVPVYNALINGVCKEYTFEEAF 266
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL------------------- 162
++ + G P +++Y +I L AG + + +L ++
Sbjct: 267 QLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGF 326
Query: 163 ---GDS-------------GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
G S G PN + Y +M R + + + M+ G +
Sbjct: 327 FLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNV 386
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I + K G L A++ M+T G ++V+Y ++++ C+ AY L++
Sbjct: 387 RTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIEN 446
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+ + + T I GLC +G + A + M G N YN ++D L KD +
Sbjct: 447 MQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRR 506
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
A + + ME + + TY+++++ C A L A +LL + G +
Sbjct: 507 FGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNI 566
Query: 383 VVDGLRHSGCRREAKKIQSKIRMAK 407
V+D G A ++ ++ K
Sbjct: 567 VIDAYCKQGKVNIAIQLMDRLSAGK 591
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 128/263 (48%), Gaps = 1/263 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID Y + D + N M G P+VV Y ++ RNS+ + + L++ M
Sbjct: 392 LIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN 451
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PP+ ++N+ + L G+ D A +VF M P T T+N +L+ L K+R A
Sbjct: 452 CPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAF 511
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + ++ G LVTYN +I G C AG L A +L ++ G P+AIT ++
Sbjct: 512 GLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAY 571
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + ++++ + + D Y ++I+ ++EA Y+ +M+++G+ ++
Sbjct: 572 CKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNV 631
Query: 242 VSYNTLI-NLYCKEGKLEAAYLL 263
++N L+ +L+ G A L
Sbjct: 632 ATWNVLVRHLFSNMGHSGAVQFL 654
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 87/195 (44%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
I C D + ++M +G P+ TYN L+ ++ + L+ +M G
Sbjct: 462 FIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRG 521
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I ++ +YN++++ G EA + M+ P T NI+++ CK + A+
Sbjct: 522 IELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAI 581
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ L + P+++ Y LI G+C + A L+ + G +PN T+ +++
Sbjct: 582 QLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHL 641
Query: 182 FRNRKYKLGLEILSA 196
F N + ++ L A
Sbjct: 642 FSNMGHSGAVQFLDA 656
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++IDAYC+ + +++R+ PD++ Y SLI+G + + ++ L ML
Sbjct: 566 IVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSE 625
Query: 61 GIPPDVWSYNSLMHCLFQ 78
GI P+V ++N L+ LF
Sbjct: 626 GISPNVATWNVLVRHLFS 643
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 73/163 (44%), Gaps = 6/163 (3%)
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y +I E +++ LL +M+ +G C + +I +AG+ + A
Sbjct: 77 LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYR 136
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-----FTYSSMVHNLCKAK 356
M ++ YN I+D L + + ++ +M+ KD FTY+ ++ LCK
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMK-KDGMEPNVFTYNILLKALCKNN 195
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
R+ A KLL+ G + + ++ L G +EA+++
Sbjct: 196 RVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL 238
>gi|30699392|ref|NP_178029.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806390|sp|A3KPF8.1|PP131_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g79080, chloroplastic; Flags: Precursor
gi|126352286|gb|ABO09888.1| At1g79080 [Arabidopsis thaliana]
gi|332198080|gb|AEE36201.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 576
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 202/414 (48%), Gaps = 7/414 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ + ++ +M + G + VTYN+L+ G L+ SL ++ +++ G
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ ++Y+ L+ ++ DEA ++ ++I P ++N++L G CK TD+A+
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR L GF +V+YNIL++ LC GR A +L E+ AP+ +TY ++
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326
Query: 182 FRNRKYKLGLEILSAMKRKGYTF--DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + + L++L M + + F Y VIA K G++ +++M+ +
Sbjct: 327 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKP 386
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ +YN + +L K++ A+ ++ + + C + +I LC+ GN A L
Sbjct: 387 NEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLL 446
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMVHNLCK 354
M + GFD + Y+ ++ L +G A+ V ME ++ +++M+ LCK
Sbjct: 447 YEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 506
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+R A ++ ++ ++ +V+G+ H AK++ ++R+ K+
Sbjct: 507 IRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKV 560
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 145/293 (49%), Gaps = 2/293 (0%)
Query: 47 LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 106
LS S L+ ++ G P+V L++ L + + +A RV + M+ + P + +
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
++N LCK A+++ ++ HG+ VTYN L++GLC G L + ++ L G
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
APNA TY+ +++ ++ R +++L + KG + Y ++ F K GR +A
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
++ G + ++VSYN L+ C +G+ E A LL EM+ T+ ILI+ L
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326
Query: 287 CKAGNIKGARLHLEYMNKIG--FDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
G + A L+ M+K F +YN ++ RL K+GK+D + + M
Sbjct: 327 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEM 379
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 148/372 (39%), Gaps = 77/372 (20%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ D + + G +VV
Sbjct: 251 VLLTGFCKEGRTDDAMALFRELPAKGFKANVV---------------------------- 282
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
SYN L+ CL G+ +EAN + +M GD P T+NI++N L + T+ A
Sbjct: 283 -------SYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQA 335
Query: 121 LRMFRGLQK--HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
L++ + + K H F +YN +I LCK G++ L E+ PN TY I
Sbjct: 336 LQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIG 395
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
C N K + I+ ++ K CT D+
Sbjct: 396 SLCEHNSKVQEAFYIIQSLSNKQKC------CT--------------HDF---------- 425
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
Y ++I C++G AA+ LL EM + GF+ D +T++ LI GLC G GA
Sbjct: 426 -----YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEV 480
Query: 299 LEYMNKI-GFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLC 353
L M + ++ +N ++ L K + D A+ VFE M + + TY+ +V +
Sbjct: 481 LSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIA 540
Query: 354 KAKRLPSASKLL 365
L A ++L
Sbjct: 541 HEDELELAKEVL 552
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 119/251 (47%), Gaps = 4/251 (1%)
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
++ L G P + L+ LCKA RL+ A +++ + SG P+A YT ++
Sbjct: 89 DSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLV 148
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ ++++ M+ GY + Y ++ +G L ++ ++E+++ G+
Sbjct: 149 NQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLA 208
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
+ +Y+ L+ KE + A LLDE+ +G E + ++ +L+ G CK G A
Sbjct: 209 PNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMAL 268
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCK 354
+ GF +N+ +YN ++ L DG+ + A ++ M+ D TY+ ++++L
Sbjct: 269 FRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAF 328
Query: 355 AKRLPSASKLL 365
R A ++L
Sbjct: 329 HGRTEQALQVL 339
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 4/148 (2%)
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
L ++ ++E +VT G + ++ L+ CK +L+ A +++ M G D +T
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 340
L++ LCK GN+ A +E M G+ SN YN +V L G ++ ++ E + K
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 341 ---DSFTYSSMVHNLCKAKRLPSASKLL 365
++FTYS ++ K + A KLL
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLL 234
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 254 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
E L ++ L+ + G + + T L+ LCKA +K A +E M G + A
Sbjct: 84 EPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASA 143
Query: 314 YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 369
Y +V++L K G + +A+ + E ME ++ TY+++V LC L + + + +
Sbjct: 144 YTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLM 203
Query: 370 KSGV 373
+ G+
Sbjct: 204 QKGL 207
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 171/344 (49%), Gaps = 7/344 (2%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G + VV Y +L G R L D + M + P+ ++YN L+H L + G+ +A
Sbjct: 130 GPAATVVAYGALTDGYCRAGRLG---DARRVVGGMPVQPNAYTYNPLIHTLCERGQVRDA 186
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
V DM+C P T+NI+L CK R A+ + ++ G P VTYN+L+ G
Sbjct: 187 LSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDG 246
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
+C G + A +L+ L G P+ + Y T++K ++ E+++ M R+ +
Sbjct: 247 MCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPN 306
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ VI + + G L++A +E+M G +IV+YN +IN C++ ++ A LL
Sbjct: 307 EATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLS 366
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+M+ G + D T+ L+ GLC A A ++ M + G + +N ++ L + G
Sbjct: 367 KMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKG 426
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
+ AI VF+ M K +S TYS+++ L KA +L A +L
Sbjct: 427 LMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELF 470
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 181/370 (48%), Gaps = 5/370 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++A C+ + +++ MR G +P+ VTYN L+ G + +L+LL +
Sbjct: 207 ILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSH 266
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +YN+++ L + +A+ + +M+ + P ATFN+++ LC+ A
Sbjct: 267 GCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQA 326
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + KHG +VTYN +I GLC+ + A +L ++ G P+ +TY T++K
Sbjct: 327 IQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKG 386
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ E++ M + G D + T+I + G + +A + +QM G +
Sbjct: 387 LCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPN 446
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++Y+T+I+ K KL+ A L +EM +GF DK + +L + L I+ A +
Sbjct: 447 SITYSTIISGLAKATKLDQALELFNEMGHKGFNPDK-IYQLLAECLNDDDTIEEAIQTVR 505
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ G + YN I+ L ++GK + AI++ M + D TY ++ L
Sbjct: 506 KLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEG 565
Query: 357 RLPSASKLLL 366
L A +LL+
Sbjct: 566 YLNEARELLI 575
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 185/406 (45%), Gaps = 5/406 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ ++L+ M G +PDVVTYN L+ + +++L+D M G
Sbjct: 173 LIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEG 232
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +YN LM + G D+A + +++ P T +N +L GLC +A
Sbjct: 233 CTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDAD 292
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + P T+N++I LC+ G L+ A +L+++ G N +TY I+
Sbjct: 293 ELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGL 352
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + +LS MK G D Y T++ + +A + M+ M +G D
Sbjct: 353 CEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDN 412
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++NTLI C++G + A + +M +G + T++ +I GL KA + A
Sbjct: 413 VTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNE 472
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M GF+ + + Y + + L D I+ AI ++ + Y++++ LC+ +
Sbjct: 473 MGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGK 531
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A ++ + SG +++GL + G EA+++ K+
Sbjct: 532 TEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL 577
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 157/314 (50%), Gaps = 10/314 (3%)
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
PPD N L+ L + G+PD+A RV CG A + + +G C+ +A R
Sbjct: 100 PPDAALANRLVRDLCRRGRPDDAERVVG--ACGPAATVVA-YGALTDGYCRAGRLGDARR 156
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ G+ P TYN LI LC+ G++R A +L ++ G AP+ +TY +++
Sbjct: 157 VVGGMPVQ---PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATC 213
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ R Y+ +E++ M+ +G T + Y ++ G + +A + + + + G + V
Sbjct: 214 KGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTV 273
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
+YNT++ C + A L+ EM ++ ++ T ++I LC+ G ++ A LE M
Sbjct: 274 NYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKM 333
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRL 358
+K G +N+ YN I++ L + +D A+ + M+ D TY++++ LC A +
Sbjct: 334 SKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQW 393
Query: 359 PSASKLLLSCLKSG 372
A +L+ + ++G
Sbjct: 394 VDAEELMDNMTQNG 407
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 145/271 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV+YN+L+ G R L+ L M
Sbjct: 141 ILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHAS 200
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN +F++M+ L P TF +++G CKN D A
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 260
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + +P+L+TYN LI GLCK G L A ++ E+ G P+ ITYTT++
Sbjct: 261 MEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDG 320
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + E M ++ D Y +I+ + GR +A M +M++ G++ D
Sbjct: 321 CCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPD 380
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+Y +IN +CK+G + LL EM++ G
Sbjct: 381 TGTYTMIINEFCKKGDVWKGSKLLKEMQRDG 411
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 137/284 (48%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E+LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 125 EEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
+ ++ + G P++ TY++LI GLCK ++ A + +E+ G PN +T+
Sbjct: 185 GDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +E+ M + D Y T+I K G L +A D M++M
Sbjct: 245 TTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG L+ A+ M ++ D +T LI GLC+ G
Sbjct: 305 KGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A + M G + Y I++ K G + + + M+
Sbjct: 365 AEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQ 408
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 151/296 (51%), Gaps = 2/296 (0%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F+ + + E G + +N L+ + + + + D + + G+ P V SYN+
Sbjct: 117 FNLVWAFYEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNT 176
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG +E ++ M + P T+++++NGLCK D+A +F + G
Sbjct: 177 LMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKG 236
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP VT+ LI G CK GR+ A + K++ P+ ITY T++ +
Sbjct: 237 LVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAH 296
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+++ M KG D Y T+I K G L A ++ ++M+ + ++LD V+Y LI+
Sbjct: 297 DLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGL 356
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIG 306
C+EG+ A ++ EM G + D T+T++I+ CK G++ KG++L L+ M + G
Sbjct: 357 CQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKL-LKEMQRDG 411
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 4/273 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
FNI+++ CK A +F + K G P +V+YN L+ G + G L + +
Sbjct: 139 FNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMH 198
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
SG P+ TY+ ++ + K E+ M KG +G + T+I K GR+
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A + +QM++ + D+++YNTLI CK+G L A+ L+DEM +G + DK T+T LI
Sbjct: 259 LAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLI 318
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV---- 339
DG CK G++ A H + M + + AY ++ L ++G+ A + M
Sbjct: 319 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLK 378
Query: 340 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
D+ TY+ +++ CK + SKLL + G
Sbjct: 379 PDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDG 411
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 130/272 (47%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
ML L K +Y + + + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 107 MLEHLVKLKYFNLVWAFYEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWG 166
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ ++Y T+M R G ++ SAM G D + Y +I K ++ +A
Sbjct: 167 LRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ E+M+ G+ + V++ TLI+ +CK G+++ A + +M Q D T+ LI GL
Sbjct: 227 ELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGL 286
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G + A ++ M+ G + Y ++D K+G +D A + M + D
Sbjct: 287 CKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 346
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K++ L G++
Sbjct: 347 VAYTALISGLCQEGRSVDAEKMMREMLSFGLK 378
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ D + +M + PD++TYN+LI G + L+ + DL+DEM G
Sbjct: 247 LIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y +L+ + G D A + MI ++ + +++GLC+ + +A
Sbjct: 307 LKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+M R + G P+ TY ++I CK G + +LKE+ GHAP+ +T
Sbjct: 367 KMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVT 418
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 164/339 (48%), Gaps = 7/339 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D + FD + ++ M G + T ++ R S +++ M G
Sbjct: 159 MVDILGKLKKFDLMWELVEEMDRLGGYVSLATMTKVMRRLARASRWKDAIEAFRGMERFG 218
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVF---QDMICGDLTPCTATFNIMLNGLCKNRYTD 118
+ D + N+LM L + + AN VF +D I L P TFN++++G CK R D
Sbjct: 219 VKKDTLAMNTLMDALVKENSVEHANDVFVEFKDSIL--LNP--HTFNVLIHGWCKARKMD 274
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
NAL+ +++HGF P++++Y +++ C+ R +L E+ + G PN +TYT +M
Sbjct: 275 NALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTIVM 334
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ ++ LE+ MK D Y ++I K GRLK+A D E M G
Sbjct: 335 HALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQGAI 394
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D+++YNT+I+ C + E A LL +ME+ + D T++ L+ C+ +K
Sbjct: 395 PDVLTYNTMISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMKVLSAL 454
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
L +M K + Y+ +V L K GK++HA FE M
Sbjct: 455 LNHMFKNDISLEVGTYSLLVHGLCKSGKLEHACLFFEEM 493
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 120/237 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C+ D + M+E G PDV++Y S++ R +L+EM E
Sbjct: 262 VLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEK 321
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PP+V +Y +MH L + + +A V++ M P T+ ++ ++ L K +A
Sbjct: 322 GCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDA 381
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + K G +P+++TYN +I C + A +L ++ +S P+ TY+ ++K
Sbjct: 382 RDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKM 441
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
C RN + K+ +L+ M + + + Y ++ K G+L+ A + E+MV+ G+
Sbjct: 442 CCRNNRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCKSGKLEHACLFFEEMVSKGL 498
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 74/142 (52%), Gaps = 7/142 (4%)
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G + + SYN+++++ K K + + L++EM++ G T T ++ L +A K A
Sbjct: 148 GYRHSMNSYNSMVDILGKLKKFDLMWELVEEMDRLGGYVSLATMTKVMRRLARASRWKDA 207
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMVH 350
M + G + A N ++D L K+ ++HA +VF +E KDS T++ ++H
Sbjct: 208 IEAFRGMERFGVKKDTLAMNTLMDALVKENSVEHANDVF--VEFKDSILLNPHTFNVLIH 265
Query: 351 NLCKAKRLPSASKLLLSCLKSG 372
CKA+++ +A K + + G
Sbjct: 266 GWCKARKMDNALKSMAEMKEHG 287
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 183/377 (48%), Gaps = 4/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C+ + G ++ M+ + + P +V+Y+SL G + L SLD+ ++
Sbjct: 365 ILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAA 424
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D +Y+ L+ G D A+++ ++M+ +L P + F +++G CK NA
Sbjct: 425 GYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNA 484
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L F + + G +P + T N++I C+ GR+ A ++ E+ G PN TY ++
Sbjct: 485 LEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINR 544
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ RK + LE+ M ++ Y T+I F K ++A +M+ GV D
Sbjct: 545 LCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPD 604
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+Y LIN+ C ++ AY L +M + G DK ++T +I G C+ G+++ A
Sbjct: 605 MVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFN 664
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M + G + Y +VD K +ID A + + M+ K D TY+ ++ +
Sbjct: 665 EMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRG 724
Query: 357 RLPSASKLLLSCLKSGV 373
L A ++L ++GV
Sbjct: 725 NLDKALEMLNEMKENGV 741
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 184/397 (46%), Gaps = 10/397 (2%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD------LLDEMLEMGIPPDVWSYN 70
++ M+ G P+V TY ++ + + +D +L+EM G P V +Y+
Sbjct: 235 SLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYS 294
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+ ++ L ++G + A + +I + +N +++GLCK D AL++ ++
Sbjct: 295 TYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSC 354
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G P++ TY+ILI G CK G + ++++E+ S P+ ++Y+++ + R +
Sbjct: 355 GISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDIS 414
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
L+I + GY +D Y +I F G L A ME+MV + + D ++ +L++
Sbjct: 415 LDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHG 474
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+CK G A + M + G T ++ID C+ G ++ A + M G N
Sbjct: 475 FCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPN 534
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLL 366
L YN +++RL K+ K + A+ +F M ++ YS+++ K A L
Sbjct: 535 LFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYA 594
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
LK GV A +++ L H EA + K+
Sbjct: 595 RMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKM 631
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 156/295 (52%), Gaps = 1/295 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ +C+ + N M E GI P + T N +I R + +L+L++EM G
Sbjct: 471 LVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQG 530
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P++++YN++++ L + K + A +F M+ ++ P ++ +++G K + AL
Sbjct: 531 IFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKAL 590
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + K G P++V Y ILI LC R+ A + K++ ++G P+ I+YT+++
Sbjct: 591 MLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGF 650
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + + + M ++G+ Y +++ + K+ R+ A +++M G+ D+
Sbjct: 651 CRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDV 710
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
V+YN LI + + G L+ A +L+EM++ G D T+ ++++ L KA +K R
Sbjct: 711 VTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTY-MMLEWLLKAKKLKTRR 764
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 195/443 (44%), Gaps = 49/443 (11%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
+F+ +L ++A S V+ ++ LI NS+L ++D+ + + G+ S N
Sbjct: 161 AFELFPILLESPKDAARS--VIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCN 218
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY------TDNALRMF 124
L+ CL + + + +F++M P T+ IM+N CK + T A +
Sbjct: 219 FLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEIL 278
Query: 125 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
++++G P +VTY+ I GLC+ G + +A ++ L + N Y I+ +
Sbjct: 279 EEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKK 338
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
+ L++L MK G + D + Y +I F K G +++ +E+M ++ +VSY
Sbjct: 339 GELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSY 398
Query: 245 NT-----------------------------------LINLYCKEGKLEAAYLLLDEMEK 269
++ LI +C +G L++A+ L++EM +
Sbjct: 399 SSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVR 458
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 329
D L+ G CK G A M + G ++ N I+D ++G+++
Sbjct: 459 NNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEE 518
Query: 330 AINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 385
A+N+ M+ + + FTY+++++ LCK ++ A +L LK V ++D
Sbjct: 519 ALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLID 578
Query: 386 GLRHSGCRREAKKIQSKIRMAKI 408
G ++A + + RM KI
Sbjct: 579 GFAKQSNSQKALMLYA--RMLKI 599
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 127/247 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++IDA+C+ + ++N M+ GI P++ TYN++I + +L+L ML+
Sbjct: 505 VIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKR 564
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P V Y++L+ + +A ++ M+ +TP + I++N LC A
Sbjct: 565 NVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEA 624
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ + ++G P+ ++Y +I G C+ G +R A + E+ GH P +TYT+++
Sbjct: 625 YNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDG 684
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + ++ MKRKG T D Y +IAA + G L +A + + +M +GV D
Sbjct: 685 YCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPD 744
Query: 241 IVSYNTL 247
++Y L
Sbjct: 745 HMTYMML 751
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 176/396 (44%), Gaps = 37/396 (9%)
Query: 23 REAGISPDVV-TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
R+ +SP VV + SL R+ S + M + G + ++ ++++ L G
Sbjct: 86 RKHVLSPVVVKVFKSLNWEVARHIKFSTT------MKKYGFSRSIDAFRTVVNVLALAGM 139
Query: 82 PDEANRVFQDMIC--------------------GDLTPCTATFNIMLNGLCKNRYTDNAL 121
E + +D++C D F++++ N +NA+
Sbjct: 140 HMEVYALLRDIVCYYNKVNLDAFELFPILLESPKDAARSVIVFDLLIKVFAANSMLENAV 199
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +K G + N L+K L +A R R + +E+ +G PN TYT +M
Sbjct: 200 DVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFY 259
Query: 182 FRNR------KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
+ + EIL M+R G + Y T I ++G ++ A D++ +++
Sbjct: 260 CKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISA 319
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
+++ YN +I+ CK+G+L+ A +L+EM+ G D YT++ILI G CK G+++
Sbjct: 320 NGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKG 379
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 351
+E M + +L +Y+ + L K D ++++F + D YS ++
Sbjct: 380 LYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKG 439
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
C L SA KL+ +++ + S +++V G
Sbjct: 440 FCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGF 475
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 81/198 (40%), Gaps = 25/198 (12%)
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+I F L+ A D Q G++L S N L+ + + E L +EM+ G
Sbjct: 185 LIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTG 244
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
+ +T+TI+++ CK GN A D + I++ + ++G
Sbjct: 245 PPPNVFTYTIMMNFYCK-GNFGEA------------DIDTRQATEILEEMERNG------ 285
Query: 332 NVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
E TYS+ ++ LC+ + SA + S + + + A++ GL G
Sbjct: 286 ------ESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKG 339
Query: 392 CRREAKKIQSKIRMAKIS 409
EA K+ +++ IS
Sbjct: 340 ELDEALKVLEEMKSCGIS 357
>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 701
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 194/448 (43%), Gaps = 79/448 (17%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M+ G++P +T N ++ A L+ + ++ DEM G+ PD SY ++ F+ GK
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
EA+R MI P AT ++L LC+N + A+ FR + GF P L+ +
Sbjct: 233 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 292
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM----KCCFRNRKYKLGLEIL--- 194
LI GLCK G ++ A +L+E+ +G PN T+T ++ K + + ++L L+++
Sbjct: 293 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 352
Query: 195 -----------------------------SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
S MK +G + Y T+I K G A
Sbjct: 353 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 412
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ M M +G +I +YN I+ CK+ + AY LL++ G E D T+TILI
Sbjct: 413 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 472
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNL---------------------------------- 311
CK +I A MNK GF++++
Sbjct: 473 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPT 532
Query: 312 -EAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLL 366
E Y ++ K+G ID A+ F +M+ V DSFTY S++ LCK + A KL
Sbjct: 533 KETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 592
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRR 394
+ + G+ S + L + C+R
Sbjct: 593 AMIDRGL----SPPEVTRVTLAYEYCKR 616
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 159/331 (48%), Gaps = 5/331 (1%)
Query: 47 LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 106
L+ ++ ++ +M G+ P + N ++ +LG + A VF +M + P ++++ +
Sbjct: 163 LNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKL 222
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
M+ G ++ A R G+ + GF+P+ T +++ LC+ G + A W +++ D G
Sbjct: 223 MVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLG 282
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
PN I +T+++ + K E+L M R G+ + + + +I K G ++A
Sbjct: 283 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAF 342
Query: 227 DYMEQMV-TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
++V +D + ++ +Y ++I YCKE KL A +L M++QG + T+T LI+G
Sbjct: 343 RLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLING 402
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV----FESMEVKD 341
CKAG+ A + M GF N+ YN +D L K + A + F D
Sbjct: 403 HCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEAD 462
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
TY+ ++ CK + A K+G
Sbjct: 463 GVTYTILIQEQCKQNDINQALAFFCRMNKTG 493
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 140/276 (50%), Gaps = 5/276 (1%)
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
G+L ML + + A+ M +Q G P +T N +++ + G +
Sbjct: 141 GNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEY 200
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
A + E+ G P++ +Y ++ CFR+ K + L+ M ++G+ D ++
Sbjct: 201 AENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILT 260
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
A + G + A Y +M+ G + +++++ +LI+ CK+G ++ A+ +L+EM + G++
Sbjct: 261 ALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKP 320
Query: 275 DKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
+ YTHT LIDGLCK G + A RL L+ + + N+ Y ++ K+ K++ A +
Sbjct: 321 NVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEML 380
Query: 334 FESMEVKDSF----TYSSMVHNLCKAKRLPSASKLL 365
F M+ + F TY+++++ CKA A +L+
Sbjct: 381 FSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELM 416
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 137/299 (45%), Gaps = 3/299 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I YC+ + + +RM+E G+ P+V TY +LI G + + +L++ M + G
Sbjct: 364 MIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEG 423
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P++++YN+ + L + + EA + L T+ I++ CK + AL
Sbjct: 424 FMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQAL 483
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F + K GF ++ NILI C+ +++ + + + + G P TYT+++ C
Sbjct: 484 AFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCY 543
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ L L+ MKR G D F Y ++I+ K + EA E M+ G+
Sbjct: 544 CKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPE 603
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+ TL YCK A +LL+ ++K+ + T L+ LC + A L +
Sbjct: 604 VTRVTLAYEYCKRNDSANAMILLEPLDKKLW---IRTVRTLVRKLCSEKKVGVAALFFQ 659
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 4/192 (2%)
Query: 216 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
F +IGRL EA + M G+ ++ N ++ + + G +E A + DEM +G D
Sbjct: 157 FSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPD 216
Query: 276 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
++ +++ G + G I+ A L M + GF + I+ L ++G ++ AI F
Sbjct: 217 SSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFR 276
Query: 336 SM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
M + ++S++ LCK + A ++L +++G + A++DGL G
Sbjct: 277 KMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRG 336
Query: 392 CRREAKKIQSKI 403
+A ++ K+
Sbjct: 337 WTEKAFRLFLKL 348
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 190/412 (46%), Gaps = 9/412 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+DA + A + + MR+AG+ P+V TYN LI +N + + +LDEM G
Sbjct: 128 LLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKG 187
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD S+ +++ + +LG+ +EA + + P A++N +++ LC
Sbjct: 188 CHPDEVSHGTIVSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHALCGEFRMWEVF 242
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P +VTY ++ CKA LR A IL + G PN +T+T ++K
Sbjct: 243 SVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGF 302
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F + K L + M +G+ Y +I IG LK A D+ M + + +
Sbjct: 303 FEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNA 362
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y+TL++ + G L+ A L+ +EM+ G + + +T +ID LCK A ++
Sbjct: 363 TTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDK 422
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M N +N ++ RL G++ A+NVF M + TY+ ++H L +
Sbjct: 423 MLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGN 482
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
A +++ L +G + V++ L R+ A + ++ + I
Sbjct: 483 HKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQ 534
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 164/365 (44%), Gaps = 35/365 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ A C ++++N M + G+ P+VVTY +++ + L + +L M+ MG
Sbjct: 228 VVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMG 287
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V ++ +L+ F+ GK +A ++ M+ P T ++N+++ GLC AL
Sbjct: 288 CTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGAL 347
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT----- 176
F ++++ +P TY+ L+ G AG L A I E+ SG PN + YT
Sbjct: 348 DFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVL 407
Query: 177 ----------------IMKCCFRNR--------------KYKLGLEILSAMKRKGYTFDG 206
+M C N + L + M+R G +
Sbjct: 408 CKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPND 467
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y ++ + G K+A + +M+ +G +L +V+YNT+IN C+ + A LLL
Sbjct: 468 RTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGR 527
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M QG + D +T +I CK G + A L MN + N+ AY ++ L GK
Sbjct: 528 MMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGK 587
Query: 327 IDHAI 331
+ +A+
Sbjct: 588 LSNAM 592
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 180/399 (45%), Gaps = 10/399 (2%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGI-SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
I A+ + S D R + G P V YN L+ R +++ + + D M + G
Sbjct: 93 IGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAG 152
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V++YN L+ L Q + D A ++ +M P + +++G+CK + A
Sbjct: 153 VDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA- 211
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
RG VP +YN ++ LC R+ ++ E+ G PN +TYTTI+
Sbjct: 212 ---RGFLAET-VPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAF 267
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R+ ++ IL+ M G T + + ++ F + G++ +A MV +G
Sbjct: 268 CKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPST 327
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+SYN LI C G L+ A + M++ + T++ L+DG AG++ GA L
Sbjct: 328 ISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNE 387
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M G N+ Y ++D L K D A ++ + M + ++ T+++++ LC R
Sbjct: 388 MKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGR 447
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ A + ++G ++ GL G ++A
Sbjct: 448 VGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDA 486
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 183/399 (45%), Gaps = 34/399 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG-------------------- 40
+LI A CQ DA +L+ M G PD V++ ++++G
Sbjct: 162 LLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPV 221
Query: 41 -ATRNSLLSC---------SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 90
A+ N+++ +++EM++ G+ P+V +Y +++ + + A +
Sbjct: 222 QASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILA 281
Query: 91 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 150
M+ TP TF ++ G ++ +AL M+ + G+ P ++YN+LI+GLC G
Sbjct: 282 RMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIG 341
Query: 151 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
L+ A + + PNA TY+T++ + I + MK G + Y
Sbjct: 342 DLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYT 401
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
+I K +A +++M+ D + V++NTLI C G++ A + M +
Sbjct: 402 NMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRN 461
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
G + T+ L+ GL + GN K A + M GF+ +L YN +++ L + HA
Sbjct: 462 GCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHA 521
Query: 331 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
+ + M V+ D+FT+++++H CK ++ A+ LL
Sbjct: 522 MLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLL 560
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 136/302 (45%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ + M + G +P ++YN LI G L +LD + M + P+ +Y++L+
Sbjct: 313 SMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGF 372
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
G D A ++ +M P + M++ LCK D A + + P
Sbjct: 373 SNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNT 432
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
VT+N LI LC GR+ A + + +G PN TY ++ FR +K ++
Sbjct: 433 VTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIE 492
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M G+ Y TVI ++ K A + +M+ G+Q D ++N +I+ YCKEGK
Sbjct: 493 MLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGK 552
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+ A LL +M + +TILI LC G + A ++L M G N +N
Sbjct: 553 VSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNV 612
Query: 317 IV 318
+V
Sbjct: 613 LV 614
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 138/286 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C N M+ + P+ TY++L+ G + L ++ + +EM
Sbjct: 332 VLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSS 391
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V Y +++ L + D+A + M+ + P T TFN ++ LC A
Sbjct: 392 GCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRA 451
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F G++++G P TYN L+ GL + G + A ++ E+ ++G + +TY T++ C
Sbjct: 452 LNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINC 511
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + +L M +G D F + +I A+ K G++ A + QM +
Sbjct: 512 LCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRN 571
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+V+Y LI+ C +GKL A + L +M +G ++ T +L+ +
Sbjct: 572 VVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAI 617
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 78/183 (42%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + + MR G P+ TYN L+ G R + ++ EML G
Sbjct: 438 LIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNG 497
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ +YN++++CL Q+ A + M+ + P TFN +++ CK A
Sbjct: 498 FELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAA 557
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +V Y ILI LC G+L A L ++ G PN T+ +++
Sbjct: 558 CLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAI 617
Query: 182 FRN 184
F N
Sbjct: 618 FTN 620
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ CQ +L RM GI PD T+N++I + +S + LL +M +
Sbjct: 508 VINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVN 567
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P +V +Y L+ L GK A M+ + P AT+N+++ + N T +
Sbjct: 568 CPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTIGPI 627
Query: 122 RMFR 125
+F+
Sbjct: 628 HLFK 631
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 169/394 (42%), Gaps = 39/394 (9%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
TYN LI + L EM GI P + +YN+++H L + + + A F +M
Sbjct: 316 TYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEM 375
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
L P T+N MLNG CK AL + L++ G P ++TYN LI G C+ G L
Sbjct: 376 RAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGL 435
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT- 211
AR + +E+ + G P+ TYT +M + R + E M KG D F Y T
Sbjct: 436 EEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTR 495
Query: 212 ----------------------------------VIAAFVKIGRLKEATDYMEQMVTDGV 237
+I K G LK+A D +MV+DG+
Sbjct: 496 ICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGL 555
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
Q D ++Y LI+ +C+ G L A LL+ M G + T+TILI C+ GN+ A
Sbjct: 556 QPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYG 615
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLC 353
M +G + N YN ++ L + G+ A + F M + +TY+ ++ C
Sbjct: 616 WFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNC 675
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ A +L ++G+ A+ G
Sbjct: 676 REGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF 709
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 159/337 (47%), Gaps = 38/337 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ + + M E G PDV TY L+ G+ + L + + DEML G
Sbjct: 425 LIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKG 484
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD ++YN+ + LG +A ++ + M+ + P T T+N++++GLCK +A
Sbjct: 485 LQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAK 544
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P+ +TY LI C+ G L AR +L + G P+ +TYT ++ C
Sbjct: 545 DLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTC 604
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R G L A + +M+ G++ +
Sbjct: 605 CRR-----------------------------------GNLYSAYGWFRKMLDVGIEPNE 629
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLE 300
++YN LI+ C+ G+ AY EM ++G +KYT+T+LIDG C+ GN A RL+ E
Sbjct: 630 ITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFE 689
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M++ G + +N + K G + HAI E++
Sbjct: 690 -MHQNGIPPDYCTHNALFKGFDK-GHMYHAIEYLENI 724
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 182/399 (45%), Gaps = 13/399 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMRE--AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
L+D++ + D +L M G + VTYN +I+ R L + L+D M
Sbjct: 249 LLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSM-R 307
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ ++YN L+ L + G + + +M + P T+N +++GL K+ +
Sbjct: 308 LSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEA 367
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A F ++ G +P+L+TYN ++ G CKAG L+ A W+L +L +G AP +TY T++
Sbjct: 368 AQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLID 427
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
R + + M +G D Y ++ K+ L A ++ ++M++ G+Q
Sbjct: 428 GYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQP 487
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D +YNT I G A+ L + M +G D T+ ++IDGLCK GN+K A+
Sbjct: 488 DCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLK 547
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMVHNLCK 354
M G + Y C++ + G + A + M V D TY+ ++H C+
Sbjct: 548 MKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGM-VSDGLQPSVVTYTILIHTCCR 606
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 393
L SA L G+ + + L H+ CR
Sbjct: 607 RGNLYSAYGWFRKMLDVGI----EPNEITYNVLIHALCR 641
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 169/355 (47%), Gaps = 7/355 (1%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G++PDV N ++ + + EML++ I P + +YN+L+ + G+ DEA
Sbjct: 203 GVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEA 262
Query: 86 NRVFQDMIC--GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+ + ++M G T+N++++ L + + +NA ++ ++ TYN LI
Sbjct: 263 SMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKASSF-TYNPLI 321
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
L + G ++ + E+ + G P +TY I+ ++ + + + M+ G
Sbjct: 322 TALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLL 381
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y +++ + K G LKEA + + G+ +++YNTLI+ YC+ G LE A L
Sbjct: 382 PDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRL 441
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
+EM +QG D T+TIL++G K N+ AR + M G + AYN +
Sbjct: 442 KEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELI 501
Query: 324 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
G A + E M +K D+ TY+ ++ LCK L A L + + G++
Sbjct: 502 LGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQ 556
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 134/293 (45%), Gaps = 7/293 (2%)
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
F+ + C + P N +L L D+ ++R + + P +VTYN L+
Sbjct: 195 AFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFL 254
Query: 148 KAGRLRTARWILKELGDSGHA--PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
K GR A +LKE+ G N +TY ++ R + +++ +M R
Sbjct: 255 KEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSM-RLSKKAS 313
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
F Y +I A ++ G +++ +M +G+ +V+YN +I+ K ++EAA L
Sbjct: 314 SFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFA 373
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM G D T+ +++G CKAGN+K A L + + G + YN ++D + G
Sbjct: 374 EMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLG 433
Query: 326 KIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
++ A + E M + F TY+ +++ K + LP A + L G++
Sbjct: 434 GLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQ 486
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ + + +M G+ PD +TY LI LLS + LL+ M+
Sbjct: 529 VIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSD 588
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P V +Y L+H + G A F+ M+ + P T+N++++ LC+ T A
Sbjct: 589 GLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLA 648
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
F + + G P TY +LI G C+ G A + E+ +G P+ T+ + K
Sbjct: 649 YHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFK 707
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 126/290 (43%), Gaps = 44/290 (15%)
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L FR + HG P++ N +++ L A R R + +E+ P +TY T++
Sbjct: 193 LAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLD- 251
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG--VQ 238
+F+K GR EA+ +++M T G
Sbjct: 252 ----------------------------------SFLKEGRKDEASMLLKEMETQGGGCL 277
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-L 297
L+ V+YN +I+ +EG LE A L+D M + + +T+ LI L + G ++ L
Sbjct: 278 LNDVTYNVVISFLAREGHLENAAKLVDSM-RLSKKASSFTYNPLITALLERGFVQKVEAL 336
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 353
+E N+ G L YN I+ L K +++ A F M + D TY+SM++ C
Sbjct: 337 QMEMENE-GIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYC 395
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
KA L A LL ++G+ ++DG G EA++++ ++
Sbjct: 396 KAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEM 445
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 66/174 (37%), Gaps = 52/174 (29%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ + + Y +M + GI P+ +TYN LI R + EMLE
Sbjct: 599 ILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLER 658
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ ++Y ++++G C+ +A
Sbjct: 659 GLAPNKYTY-----------------------------------TLLIDGNCREGNWADA 683
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
+R++ + ++G P+ T+N L KG D GH +AI Y
Sbjct: 684 IRLYFEMHQNGIPPDYCTHNALFKGF-----------------DKGHMYHAIEY 720
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 154/302 (50%)
Query: 20 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 79
+RM G+ P+VV YN+L+ G L ++ + ++M G P+V +Y++L+ +
Sbjct: 340 DRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKA 399
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
G D A+ V+ MI P + M++ LC+N + A + +Q P VT+
Sbjct: 400 GDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTF 459
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
N IKGLC +GR+ A + ++G+SG PN TY ++ ++R++ ++ M+
Sbjct: 460 NTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEH 519
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
+G + Y T+I + G L EA + + +MV G + D ++ N +I+ YCK+GK+
Sbjct: 520 RGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNI 579
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A L+D + + D +T LI G+C ++ A ++L M G N+ +N +V
Sbjct: 580 AIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVR 639
Query: 320 RL 321
L
Sbjct: 640 HL 641
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 192/421 (45%), Gaps = 34/421 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M+I+ D +L +M+ GIS + S+I R +L M +
Sbjct: 81 MMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDF 140
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P V YN ++ L + N ++ +M + P T+NI+L LCKN D A
Sbjct: 141 RVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGA 200
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR------------------------ 156
++ + G P+ V+Y LI LCK G+++ AR
Sbjct: 201 HKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEY 260
Query: 157 ------WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
+L E+ + G PN I+YTTI+ +L L +L+ M +G + + +
Sbjct: 261 TFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFT 320
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
++I F G EA D+ ++M+ +GV ++V+YN L++ C + L A + ++ME
Sbjct: 321 SLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEIN 380
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
G + T++ LIDG KAG++ GA +M G N+ AY C+VD L ++ + A
Sbjct: 381 GCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQA 440
Query: 331 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+ E+M+V+ ++ T+++ + LC + R+ A K+ SG + ++D
Sbjct: 441 YCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDS 500
Query: 387 L 387
L
Sbjct: 501 L 501
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 174/376 (46%), Gaps = 4/376 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C+ +F+ + +L+ M GI P+V++Y ++I + + SL +L +M G
Sbjct: 252 LINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARG 311
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P++ ++ SL+ F G EA + MI + P +N +++GLC R +A+
Sbjct: 312 CSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAV 371
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ +G P + TY+ LI G KAG L A + + G PN + YT ++
Sbjct: 372 SVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVL 431
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
RN + ++ M+ + + + T I GR+ A +QM G +
Sbjct: 432 CRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNT 491
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN L++ K+ + A+ L+ +ME +G E + T+ +I G C AG + A L
Sbjct: 492 TTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGK 551
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M G + N ++D K GK++ AI + + + D Y+S++ +C
Sbjct: 552 MVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIG 611
Query: 358 LPSASKLLLSCLKSGV 373
+ A L L G+
Sbjct: 612 VEEAIVYLRRMLSEGI 627
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 185/445 (41%), Gaps = 44/445 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++DA F I + M++ G+ P+V TYN L+ +N+ + + LL EM G
Sbjct: 152 ILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKG 211
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD SY +L+ L +LGK EA + TP +N ++NG+CK + A
Sbjct: 212 CDPDEVSYTTLISSLCKLGKVKEARE-----LAMSFTPSVPVYNALINGVCKEYTFEEAF 266
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL------------------- 162
++ + G P +++Y +I L AG + + +L ++
Sbjct: 267 QLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGF 326
Query: 163 ---GDS-------------GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
G S G PN + Y +M R + + + M+ G +
Sbjct: 327 FLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNV 386
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I + K G L A++ M+T G ++V+Y ++++ C+ AY L++
Sbjct: 387 RTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIEN 446
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+ + + T I GLC +G + A + M G N YN ++D L KD +
Sbjct: 447 MQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRR 506
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
A + + ME + + TY+++++ C A L A +LL + G +
Sbjct: 507 FGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNI 566
Query: 383 VVDGLRHSGCRREAKKIQSKIRMAK 407
V+D G A ++ ++ K
Sbjct: 567 VIDAYCKQGKVNIAIQLMDRLSAGK 591
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 133/273 (48%), Gaps = 2/273 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID Y + D + N M G P+VV Y ++ RNS+ + + L++ M
Sbjct: 392 LIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN 451
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PP+ ++N+ + L G+ D A +VF M P T T+N +L+ L K+R A
Sbjct: 452 CPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAF 511
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + ++ G LVTYN +I G C AG L A +L ++ G P+AIT ++
Sbjct: 512 GLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAY 571
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + ++++ + + D Y ++I+ ++EA Y+ +M+++G+ ++
Sbjct: 572 CKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNV 631
Query: 242 VSYNTLI-NLYCKEGKLEAAYLLLDEMEKQGFE 273
++N L+ +L+ G A LD + GFE
Sbjct: 632 ATWNVLVRHLFSNMGH-SGAVQFLDAVLGSGFE 663
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++IDAYC+ + +++R+ PD++ Y SLI+G + + ++ L ML
Sbjct: 566 IVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSE 625
Query: 61 GIPPDVWSYNSLMHCLFQ 78
GI P+V ++N L+ LF
Sbjct: 626 GISPNVATWNVLVRHLFS 643
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 73/163 (44%), Gaps = 6/163 (3%)
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y +I E +++ LL +M+ +G C + +I +AG+ + A
Sbjct: 77 LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYR 136
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-----FTYSSMVHNLCKAK 356
M ++ YN I+D L + + ++ +M+ KD FTY+ ++ LCK
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMK-KDGMEPNVFTYNILLKALCKNN 195
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
R+ A KLL+ G + + ++ L G +EA+++
Sbjct: 196 RVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL 238
>gi|356564752|ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Glycine max]
Length = 544
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 188/407 (46%), Gaps = 4/407 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
ML+ + CQ ++ + + MR G PD L++ S +LL E
Sbjct: 113 MLLRSLCQAGLHNSAKLLYDSMRSDGQLPDSRLLGFLVSSFALADRFDVSKELLAEAQCS 172
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ DV YN+ ++ L + + D+A +F++++ TFNI++ GLC D A
Sbjct: 173 GVQVDVIVYNNFLNILIKHNRLDDAICLFRELMRSHSCLDAFTFNILIRGLCTAGDVDEA 232
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG-DSGHAPNAITYTTIMK 179
+ + G P++VTYNIL+ GLC+ ++ AR +L+E+ APN ++YTT++
Sbjct: 233 FELLGDMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEEVCLKCEFAPNVVSYTTVIS 292
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
R K + M R G + F + ++ FVK G + A ++++ G
Sbjct: 293 GYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAGDMASALGMHKKILFHGCAP 352
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
++++ +LIN YC+ G + L EM + + YT+++LI LCK+ ++ AR L
Sbjct: 353 NVITLTSLINGYCRAGWVNHGLDLWREMNARNIPANLYTYSVLISALCKSNRLQEARNLL 412
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---DSFTYSSMVHNLCKAK 356
+ + YN ++D K G ID A + ME K D T++ ++ C
Sbjct: 413 RILKQSDIVPLAFVYNPVIDGYCKSGNIDEANAIVAEMEEKCKPDKLTFTILIIGHCMKG 472
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
R P A + L SG + + L SG EA +I+ +
Sbjct: 473 RTPEAIGIFYKMLASGCTPDDITIRTLSSCLLKSGMPGEAARIKETL 519
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 145/345 (42%), Gaps = 46/345 (13%)
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
T+N++L LC+ ++A ++ ++ G +P+ L+ A R ++ +L E
Sbjct: 110 TYNMLLRSLCQAGLHNSAKLLYDSMRSDGQLPDSRLLGFLVSSFALADRFDVSKELLAEA 169
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
SG + I Y + ++ + + + + R D F + +I G +
Sbjct: 170 QCSGVQVDVIVYNNFLNILIKHNRLDDAICLFRELMRSHSCLDAFTFNILIRGLCTAGDV 229
Query: 223 KEATDYMEQMVTDGVQLDIVSYN------------------------------------T 246
EA + + M + G DIV+YN T
Sbjct: 230 DEAFELLGDMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEEVCLKCEFAPNVVSYTT 289
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
+I+ YC+ K++ A L EM + G + + +T + L+DG KAG++ A L KI
Sbjct: 290 VISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAGDMASA---LGMHKKIL 346
Query: 307 FD---SNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLP 359
F N+ +++ + G ++H ++++ M ++ +TYS ++ LCK+ RL
Sbjct: 347 FHGCAPNVITLTSLINGYCRAGWVNHGLDLWREMNARNIPANLYTYSVLISALCKSNRLQ 406
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
A LL +S + L V+DG SG EA I +++
Sbjct: 407 EARNLLRILKQSDIVPLAFVYNPVIDGYCKSGNIDEANAIVAEME 451
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 126/294 (42%), Gaps = 49/294 (16%)
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
R+T L M H F TYN+L++ LC+AG +A+ + + G P++
Sbjct: 96 RFTRERLSM-----SHSFW----TYNMLLRSLCQAGLHNSAKLLYDSMRSDGQLPDS--- 143
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
GF ++++F R + + + +
Sbjct: 144 ----------------------------RLLGF----LVSSFALADRFDVSKELLAEAQC 171
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
GVQ+D++ YN +N+ K +L+ A L E+ + D +T ILI GLC AG++
Sbjct: 172 SGVQVDVIVYNNFLNILIKHNRLDDAICLFRELMRSHSCLDAFTFNILIRGLCTAGDVDE 231
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMV 349
A L M G ++ YN ++ L + ++D A ++ E + +K F +Y++++
Sbjct: 232 AFELLGDMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEEVCLKCEFAPNVVSYTTVI 291
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
C+ ++ AS L ++SG + A+VDG +G A + KI
Sbjct: 292 SGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAGDMASALGMHKKI 345
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 197/410 (48%), Gaps = 15/410 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C + +++L+++ + G PD VT +LI G + +L D++L
Sbjct: 103 ILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQ 162
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT-PCTATFNIMLNGLCKNRYTDN 119
G D SY +L++ + ++G+ A ++ + I G LT P +N +++ LCK +
Sbjct: 163 GFRLDQVSYGTLINGVCKIGETRAAIQLLRR-IDGRLTEPNVVMYNTIIDCLCKRKLVSE 221
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +F + G +VTY+ +I G C G+L A L E+ P+ Y T++
Sbjct: 222 ACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVD 281
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ K K +L+ + + + Y T+I + K + A M GV
Sbjct: 282 ALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAK--HVFNAVGLM------GVTP 333
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+ SYN +IN CK ++E A L EM ++ + T+ LIDGLCK+G I A +
Sbjct: 334 DVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLI 393
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN-LCK 354
+ M+ G +N+ YN +++ L K+G++D AI + M+ + D +T + ++H LCK
Sbjct: 394 DEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCK 453
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
KRL +A L L G ++ G G EA +QSK+
Sbjct: 454 GKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKME 503
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 159/323 (49%), Gaps = 28/323 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ + + M GIS +VVTY+++I G L+ +L L+EM+
Sbjct: 209 IIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKA 268
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRV---------------FQDMICG----------- 95
I PDV+ YN+L+ L + GK EA V + +I G
Sbjct: 269 INPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGL 328
Query: 96 -DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
+TP ++NIM+N LCK + + AL +++ + + VP VTYN LI GLCK+GR+
Sbjct: 329 MGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISY 388
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
A ++ E+ D GH N ITY +++ +N + + +++ MK +G D + ++
Sbjct: 389 AWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLH 448
Query: 215 AFVKIG-RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ G RLK A + ++ G ++ +YN +I +CKEG L+ AY L +ME G
Sbjct: 449 GLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCS 508
Query: 274 CDKYTHTILIDGLCKAGNIKGAR 296
+ T I+I L + G A
Sbjct: 509 PNAITFKIIICALLEKGETDKAE 531
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 186/400 (46%), Gaps = 12/400 (3%)
Query: 9 FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 68
F + D +RM +P ++ +N ++ + + L + I PD ++
Sbjct: 41 FENVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFT 100
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
N L++C LG+ + A V ++ P T T ++ GLC AL L
Sbjct: 101 LNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLL 160
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
GF + V+Y LI G+CK G R A +L+ + PN + Y TI+ C + +
Sbjct: 161 AQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVS 220
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
+ S M KG + + Y +I F +G+L EA ++ +MV + D+ YNTL+
Sbjct: 221 EACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLV 280
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
+ KEGK++ A +L + K + + T+ LIDG A+ + +G
Sbjct: 281 DALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY--------AKHVFNAVGLMGVT 332
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 364
++ +YN +++RL K +++ A+N+++ M V ++ TY+S++ LCK+ R+ A L
Sbjct: 333 PDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDL 392
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ G ++++GL +G +A + +K++
Sbjct: 393 IDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMK 432
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 102/179 (56%), Gaps = 1/179 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ + + M + + P+ VTYNSLI G ++ +S + DL+DEM +
Sbjct: 340 IMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDR 399
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG-LCKNRYTDN 119
G +V +YNSL++ L + G+ D+A + M + P T NI+L+G LCK + N
Sbjct: 400 GHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKN 459
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A +F+ L G+ P + TYNI+I G CK G L A + ++ DSG +PNAIT+ I+
Sbjct: 460 AQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIII 518
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
+ G P+V TYN +I G + LL + L +M + G P+ ++ ++ L + G+ D
Sbjct: 469 DKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETD 528
Query: 84 EANRVFQDMI 93
+A ++ +MI
Sbjct: 529 KAEKLLCEMI 538
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 194/405 (47%), Gaps = 2/405 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS--CSLDLLDEMLE 59
++ Y + FD +L+ MR + PD+V++N+LI ++ L+ + DLL E+ +
Sbjct: 69 MMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCLAPGSAFDLLLEVRQ 128
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+G+ PDV +YN+L+ Q D+A VF++M+ + P T+N M++ + +
Sbjct: 129 VGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCGKAQD 188
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A RMFR L + GF P+ VTYN L+ K G T + +EL +G + ITY T++
Sbjct: 189 AERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYNTMIH 248
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + L L + M+ G T D Y +I + K+ R+ +A +E+M G++
Sbjct: 249 MYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADAGLKP 308
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+V+++ LI Y K G+ E A M G + D+ + +++D + ++G+++
Sbjct: 309 TLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDMRKLMALY 368
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLP 359
+ M G+ + Y ++ L K + D V + MEV + L KA+ +
Sbjct: 369 QTMMNDGYRPDNALYQVMLAALAKGNEYDEIEAVVQDMEVVCQMNPQLVSSILIKAECIS 428
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+KLL G + +++D +G E + IR
Sbjct: 429 QGAKLLKKACLQGHEPDSKSLLSILDAYETTGKHEEGLSLLQFIR 473
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 138/299 (46%), Gaps = 6/299 (2%)
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR--TARWILK 160
FN M+ ++ D+ ++ ++ P+LV++N LI K+G L +A +L
Sbjct: 65 VFNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCLAPGSAFDLLL 124
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
E+ G P+ ITY T++ C + + + M D + Y +++ + G
Sbjct: 125 EVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCG 184
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
+ ++A ++V G + D V+YN+L+ + KEG + + +E+ + GF+ D T+
Sbjct: 185 KAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYN 244
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 338
+I K G + A + M +G + Y ++D LGK +I A V E M
Sbjct: 245 TMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADA 304
Query: 339 -VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
+K + T+S+++ K R A + + SGV+ + A ++D + SG R+
Sbjct: 305 GLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDMRK 363
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 146/337 (43%), Gaps = 1/337 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+AY + + + +++ S D +N+LI + L + + D M+E G
Sbjct: 596 MIEAYGKIKLWQHAENFVKGLKQEP-SIDRRIWNALIHAYAESGLYEHARAVFDIMIEKG 654
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + S N +M L G+ DE + Q++ +T +ML+ K +
Sbjct: 655 PLPTIDSVNGMMRALIIDGRLDELYVIVQELQDMGFKISKSTVILMLDAFTKAGDIFEVM 714
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ G+++ G++P + Y +I LC+ R R ++ E+ +G P+ T++
Sbjct: 715 KIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLLMY 774
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N + +E+ ++ G + Y T+I + + R +E + +M G+ +
Sbjct: 775 TGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPKL 834
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
SY +L+ K E A L +E+ +G+ ++ + +L+ A N A L
Sbjct: 835 ESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDACNHSKAEQLLAS 894
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
M + G + + + ++ G G D A V S++
Sbjct: 895 MKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLK 931
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 144/319 (45%), Gaps = 4/319 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN-SLIAGATRNSLLSCSLDLLDEM-LE 59
+I AYC+ + + +++ ++GIS ++++ ++I + L + + + + E
Sbjct: 560 MISAYCKLGFPETAHQLMDEAVQSGISLNILSSRVTMIEAYGKIKLWQHAENFVKGLKQE 619
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
I +W N+L+H + G + A VF MI P + N M+ L + D
Sbjct: 620 PSIDRRIW--NALIHAYAESGLYEHARAVFDIMIEKGPLPTIDSVNGMMRALIIDGRLDE 677
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+ + LQ GF T +++ KAG + I + ++G+ PN Y +++
Sbjct: 678 LYVIVQELQDMGFKISKSTVILMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMIS 737
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
RN++Y+ ++ M+R G+ D T++ + G + + ++ G++
Sbjct: 738 LLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEP 797
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ +YNTLI +Y + + E + LL+EM K+G ++ L+ KA + A
Sbjct: 798 NEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLF 857
Query: 300 EYMNKIGFDSNLEAYNCIV 318
E + G+ N Y+ ++
Sbjct: 858 EEIRSKGYRLNRSLYHMLM 876
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 124/308 (40%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++DA+ + I N M+EAG P++ Y S+I+ RN ++ EM
Sbjct: 699 LMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEMERA 758
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ N+L+ G D+ V+ ++ L P T+N ++ +N +
Sbjct: 759 GFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLRPEEG 818
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K G P+L +Y L+ KA A + +E+ G+ N Y +MK
Sbjct: 819 FTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKI 878
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++L++MK G ++ ++ G EA + + + +++
Sbjct: 879 YRDACNHSKAEQLLASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSSLEVS 938
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ Y+T+ N Y K G L EM+ G + D T I A L L
Sbjct: 939 TLPYSTVFNAYLKNGDYNLGITKLLEMKADGVKPDHQVWTCFIRAASLCERTADAILLLN 998
Query: 301 YMNKIGFD 308
+ FD
Sbjct: 999 SLRDCEFD 1006
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/439 (20%), Positives = 178/439 (40%), Gaps = 53/439 (12%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
DAG +L M +AG+ P +VT+++LI + ++ M+ G+ PD +Y +
Sbjct: 293 DAG-KVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVM 351
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH-G 131
+ + + G + ++Q M+ P A + +ML L K D + + ++
Sbjct: 352 LDIIARSGDMRKLMALYQTMMNDGYRPDNALYQVMLAALAKGNEYDEIEAVVQDMEVVCQ 411
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
P+LV+ +ILIK C + +LK+ GH P++ + +I+ K++ GL
Sbjct: 412 MNPQLVS-SILIKAEC----ISQGAKLLKKACLQGHEPDSKSLLSILDAYETTGKHEEGL 466
Query: 192 EILSAMKR---------------------------KGYTF------DGFG-----YCTVI 213
+L ++ + Y+ FG Y +I
Sbjct: 467 SLLQFIREHVPSSCNLISECSIMLLCKNQKIAAAMQEYSSMQMLKCGSFGQDCNLYEYLI 526
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ EA+ M G++ Y ++I+ YCK G E A+ L+DE + G
Sbjct: 527 TCLEEAEFFPEASQVFSDMQFIGIEPSRKIYESMISAYCKLGFPETAHQLMDEAVQSGIS 586
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE--AYNCIVDRLGKDGKIDHAI 331
+ + + + + G IK + ++ + + +++ +N ++ + G +HA
Sbjct: 587 LNILSSRVTM--IEAYGKIKLWQHAENFVKGLKQEPSIDRRIWNALIHAYAESGLYEHAR 644
Query: 332 NVFESMEVKDSFTYSSMVHNLCKA----KRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
VF+ M K V+ + +A RL ++ G +I KS ++D
Sbjct: 645 AVFDIMIEKGPLPTIDSVNGMMRALIIDGRLDELYVIVQELQDMGFKISKSTVILMLDAF 704
Query: 388 RHSGCRREAKKIQSKIRMA 406
+G E KI + ++ A
Sbjct: 705 TKAGDIFEVMKIYNGMKEA 723
>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 172/352 (48%), Gaps = 10/352 (2%)
Query: 21 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 80
RMR P +V ++ L+ TR S L L +M GIP + ++ N L++ L
Sbjct: 3 RMRPP---PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLN 59
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
+ A V D++ P TATF ++ GLC AL++F + GF P+++TY
Sbjct: 60 RLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYG 119
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
LI GLCK +L A + ++ G +PN TY++++ +K + + AM +
Sbjct: 120 TLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHR 179
Query: 201 GYTFDGFGYCTVIAAFVKIGRLK---EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
D + T++ A K G ++ +A E+M G+ D V+YNTLI+ C G+L
Sbjct: 180 KIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRL 239
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A L EM G D T+ IL D LCK + A + L+ + D ++ Y+ +
Sbjct: 240 RDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIV 299
Query: 318 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
+D + + G+++ A ++F + K D TY+ M++ LC+ L ASKL
Sbjct: 300 MDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLF 351
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 139/275 (50%), Gaps = 3/275 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + ++M G PDV+TY +LI G ++ L+ +L L +ML G
Sbjct: 86 LIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKG 145
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN---RYTD 118
I P+ ++Y+SL+H L LG EA R+F MI + P TFN +++ LCK + D
Sbjct: 146 ISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMD 205
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A+ +F + + G +P+ VTYN LI GLC GRLR A + E+ G P+ +TY +
Sbjct: 206 KAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILF 265
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+N + + +L ++ D Y V+ + G L+ A D ++ + G+
Sbjct: 266 DYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLH 325
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
D+ +Y +IN C++G L A L EM++ E
Sbjct: 326 PDVRTYTIMINGLCQQGLLAEASKLFGEMDENDIE 360
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 168/358 (46%), Gaps = 38/358 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+++C +++L + + G P T+ +LI G + +L L D+M
Sbjct: 50 ILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGE 109
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +Y +L++ L + + EA +F DM+ ++P T++ +++GLC + A
Sbjct: 110 GFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEA 169
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT---ARWILKELGDSGHAPNAITYTTI 177
+R+F + +P+ +T+N L+ LCK G ++ A + +E+ G P+ +TY
Sbjct: 170 IRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYN-- 227
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
T+I +GRL++A +MV G
Sbjct: 228 ---------------------------------TLIHGLCHVGRLRDAIALFHEMVVYGQ 254
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
D+V+Y L + CK +L A +LL +E + D + ++I++DG+C+AG ++ AR
Sbjct: 255 IPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARD 314
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA 355
++ G ++ Y +++ L + G + A +F M+ D +YS+ N K
Sbjct: 315 LFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENDIESYSTFSRNAFKG 372
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 160/350 (45%), Gaps = 7/350 (2%)
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
ML M PP + ++ L+ + ++ +++ M + T T NI++N C
Sbjct: 1 MLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNR 60
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
A + + K G+ P T+ LI+GLC G++ A + ++ G P+ +TY T
Sbjct: 61 LGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGT 120
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ ++R+ L + S M KG + + F Y ++I +G KEA M+
Sbjct: 121 LINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK 180
Query: 237 VQLDIVSYNTLINLYCKEGKLE---AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
+ D +++NTL++ CKEG ++ A L +EM +QG D T+ LI GLC G ++
Sbjct: 181 IMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLR 240
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMV 349
A M G +L Y + D L K+ ++ A+ + + +E D YS ++
Sbjct: 241 DAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVM 300
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+C+A L +A L G+ +++GL G EA K+
Sbjct: 301 DGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKL 350
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 146/292 (50%), Gaps = 1/292 (0%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
++ LE G P ++ +N LMH + G+ A VF + L P +FN ++NG +
Sbjct: 125 EDSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ +Q G P++ TY++LI GLCK ++ A + E+ D+G PN +T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A D +++M
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D V+Y TLI+ CKEG LE A+ M K+ D +T LI GLC+ G
Sbjct: 305 KGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYS 346
A L M +G + Y I++ K G + + + M+ +D + S
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQ-RDGYVPS 415
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 145/272 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P V++N+L+ G R L L + M
Sbjct: 141 ILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQAS 200
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D AN +F +M+ L P TF +++G CKN D A
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLA 260
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + P+L+TYN LI GLCK G L+ A+ ++ E+ G P+ +TYTT++
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDG 320
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + E M ++ D Y +I+ + GR +A + +M++ G++ +
Sbjct: 321 SCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I +Y +IN +CK+G + L+ EM++ G+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLMKEMQRDGY 412
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 145/284 (51%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + G+ P S+N+LM+ +LG D
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLD 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M + P T+++++NGLCK D A +F + +G VP VT+ LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I K++ +P+ ITY T++ + K +++ M KG
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A +Y ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
L EM G + + T+T++I+ CK G++ ++ M + G+
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGY 412
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 122/248 (49%), Gaps = 4/248 (1%)
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G+ L +NIL+ CK G ++ A+ + + G P A+++ T+M R G
Sbjct: 131 GYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEG 190
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+ +AM+ G D + Y +I K ++ A + +M+ +G+ + V++ TLI+
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDG 250
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+CK G+++ A + +M Q D T+ LI GLCK G++K A+ ++ M+ G +
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
Y ++D K+G ++ A + M + D Y++++ LC+ R A K+L
Sbjct: 311 KVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 367 SCLKSGVR 374
L G++
Sbjct: 371 EMLSVGLK 378
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 90/172 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ D I +M +SPD++TYN+LI G + L + DL+DEM G
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y +L+ + G + A + MI ++ + +++GLC+ + +A
Sbjct: 307 LKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+M R + G PE+ TY ++I CK G + T ++KE+ G+ P+ +T
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 192/407 (47%), Gaps = 7/407 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I YC+ D+ + I NRM E G P+ TY++LI G + ++ +LD + EM G
Sbjct: 269 MILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHG 328
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P V ++ + + L +G+ ++A ++F DM P T+ +++G R + A+
Sbjct: 329 VLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG---QRVSRMAI 385
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + + G VP VTYN L+ L + + +A + +G G PN +Y +++
Sbjct: 386 GLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGY 445
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + +L+ M + T Y +I + G A +E M +G Q D
Sbjct: 446 CTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDE 505
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
SY LI+ +CK K+E A + +EM +G ++ T+T LI G CK + A LE
Sbjct: 506 WSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLER 565
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV----FESMEVKDSFTYSSMVHNLCKAKR 357
M + G N++ YN ++ L K A + E D TYS++++ LC
Sbjct: 566 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGA 625
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+P A ++ +K G +++ L G EA+++ S+++
Sbjct: 626 IPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELK 672
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 186/391 (47%), Gaps = 7/391 (1%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
I A C + + I M++ G P+V TY SLI+G + + ++ L M G+
Sbjct: 340 IVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRM---AIGLFHRMSRDGV 396
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P+ +YN+LM+ L + + D A VF M P T+++N ++ G C T+ A+
Sbjct: 397 VPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMS 456
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
M + K P LVTYNI+IKG C +G A +L+ + +G P+ +YT ++
Sbjct: 457 MLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFC 516
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ K +L + + M +G + Y +I+ + K +L A +E+M G + ++
Sbjct: 517 KISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQ 576
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
+YN LI+ K+ A L M ++ D T++ +I+GLC G I A M
Sbjct: 577 TYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKM 636
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRL 358
K G NL Y+ ++ LG++G+++ A +F ++ + D TY M+ + ++
Sbjct: 637 VKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKV 696
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
A L + +G + ++ GL++
Sbjct: 697 DRAFDFLGEMINAGCQPTLQTYDVLIKGLQN 727
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 182/394 (46%), Gaps = 7/394 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+A C+ + +I+N++ ++G+ PD TY S+I G RN L + ++ + M E G
Sbjct: 234 VINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEG 293
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y++L++ L G+ +EA +M + P TF + LC ++A
Sbjct: 294 CEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAW 353
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F ++K G P + TY LI G + R A + + G PN +TY +M
Sbjct: 354 KIFIDMKKKGCKPNVYTYTSLISGQRVS---RMAIGLFHRMSRDGVVPNTVTYNALMNVL 410
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N + L + + M + G + Y +I + IG ++A + M+ +
Sbjct: 411 MENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTL 470
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN +I YC G + A +L+ M+ G + D++++T LI G CK ++ A
Sbjct: 471 VTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNE 530
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G N Y ++ KD K+D A + E M+ + TY+ ++H L K
Sbjct: 531 MMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNN 590
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
A +L L+ + V++GL ++G
Sbjct: 591 FSGAEELCKVMLEEKISPDVVTYSTVINGLCNNG 624
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 177/380 (46%), Gaps = 26/380 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI YC + ++L M + +P +VTYN +I G + ++ +L+ M G
Sbjct: 441 LIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANG 500
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD WSY L+ ++ K + A+ +F +M+ L P T+ +++G CK+ D A
Sbjct: 501 CQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAA 560
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
RM +++ G P + TYN+LI GL K A + K + + +P+ +TY+T++
Sbjct: 561 RMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGL 620
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N L LE+ + M + G + Y ++I A + GR++EA + ++ G+ D
Sbjct: 621 CNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDE 680
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK----------AGN 291
V+Y +I + GK++ A+ L EM G + T+ +LI GL
Sbjct: 681 VTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNA 740
Query: 292 IKGARLHLEYMNK------------IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-- 337
+ + +NK + F+ + + Y+ ++ RL + G+ A N++ SM
Sbjct: 741 ASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVS 800
Query: 338 --EVKDSFTYSSMVHNLCKA 355
+ + TY + +L +A
Sbjct: 801 QSQCPNQDTYKHFLISLLRA 820
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 184/396 (46%), Gaps = 25/396 (6%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
L+ + G + TY +L+ + ++ S +D ++L G+ P++ YNS+++ L +
Sbjct: 181 LDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCK 240
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
G +A + + + P T T+ M+ G C+NR D+A +F + + G P T
Sbjct: 241 DGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAAT 300
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT-IMKCCFRNRKYKLGLEILSAM 197
Y+ LI GLC +GR+ A + E+ G P T+T I+ C R + +I M
Sbjct: 301 YSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGR-IEDAWKIFIDM 359
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
K+KG + + Y ++I+ ++ R+ A +M DGV + V+YN L+N+ + ++
Sbjct: 360 KKKGCKPNVYTYTSLISG-QRVSRM--AIGLFHRMSRDGVVPNTVTYNALMNVLMENMEI 416
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
++A ++ + M K G + ++ LI G C G+ + A L M K L YN I
Sbjct: 417 DSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNII 476
Query: 318 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ G D AI V E M+ D ++Y+ ++ CK ++ AS + + G+
Sbjct: 477 IKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGL 536
Query: 374 RILKSAQKAVVDG----------------LRHSGCR 393
+ A++ G ++ SGCR
Sbjct: 537 CPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCR 572
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 128/339 (37%), Gaps = 57/339 (16%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + +F + M E ISPDVVTY+++I G N + +L++ ++M++
Sbjct: 580 VLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKH 639
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P++ +Y+SL+ L Q G+ +EA +F ++ L P T+ M+ + D A
Sbjct: 640 GCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRA 699
Query: 121 LR-------------------MFRGLQKHGFVPELVT----------------------- 138
+ +GLQ +LV
Sbjct: 700 FDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVL 759
Query: 139 ---------------YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
Y+ L+ L ++GR A + + + PN TY + R
Sbjct: 760 SSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLR 819
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
K L +++ M + GY +I ++ R KEA E+M++ + D +
Sbjct: 820 ALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIV 879
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
+ LIN G + L ME + TIL
Sbjct: 880 WTILINGLLGAGYKDLCMEFLHIMETNRRNPSSHARTIL 918
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 4/147 (2%)
Query: 254 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
+ ++ A LD ++G + +T+T L+ L K + + G NL
Sbjct: 171 KAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLI 230
Query: 314 YNCIVDRLGKDGKIDHA---IN-VFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 369
YN +++ L KDG + A IN VF+S D+FTY+SM+ C+ + L SA ++
Sbjct: 231 YNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMD 290
Query: 370 KSGVRILKSAQKAVVDGLRHSGCRREA 396
+ G + +++GL +SG EA
Sbjct: 291 EEGCEPNAATYSTLINGLCNSGRVNEA 317
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 169/337 (50%), Gaps = 2/337 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ + + Y + + M++ ISPD +TY ++I G + + + L EM+
Sbjct: 264 LIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 323
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y +L+ + GK EA + M+ LTP T+ + +GLCK D A
Sbjct: 324 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 383
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G + TYN L+ GLCKAG + A ++K++ +G P+A+TYTT+M
Sbjct: 384 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 443
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++R+ E+L M + + ++ F G L++ ++ M+ G+ +
Sbjct: 444 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 503
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLE 300
+YN+LI YC + A + M +G D T+ ILI G CKA N+K A LH +
Sbjct: 504 TTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRD 563
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
+ K GF+ + +YN ++ K K A +FE M
Sbjct: 564 MVGK-GFNLTVSSYNALIKGFYKRKKFLEARELFEQM 599
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 175/391 (44%), Gaps = 39/391 (9%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L M GI+PD V Y +LI G + +S + L DEM + I PD +Y +++ L
Sbjct: 245 VLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLC 304
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
Q G+ EA+++F +M+C L P T+ +++G CK A + + + G P +V
Sbjct: 305 QTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIV 364
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY L GLCK G + TA +L E M
Sbjct: 365 TYTALADGLCKCGEVDTANELLHE-----------------------------------M 389
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
RKG + + Y +++ K G + +A M+ M G D V+Y TL++ YCK ++
Sbjct: 390 CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREM 449
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A+ LL +M + + T +L++G C +G ++ L++M + G N YN +
Sbjct: 450 VRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSL 509
Query: 318 VDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ + + ++ M V D TY+ ++ CKA+ + A L + G
Sbjct: 510 IKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGF 569
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ S+ A++ G EA+++ ++R
Sbjct: 570 NLTVSSYNALIKGFYKRKKFLEARELFEQMR 600
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 144/284 (50%), Gaps = 2/284 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ +++ N+M + G++P++VTY +L G + + + +LL EM G
Sbjct: 334 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 393
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ ++++YNSL++ L + G D+A ++ +DM P T+ +++ CK+R A
Sbjct: 394 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAH 453
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-C 180
+ R + P +VT+N+L+ G C +G L +LK + + G PNA TY +++K
Sbjct: 454 ELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQY 513
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C RN + EI M KG DG Y +I K +KEA MV G L
Sbjct: 514 CIRN-NMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLT 572
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
+ SYN LI + K K A L ++M ++G D+ + I D
Sbjct: 573 VSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFAD 616
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 113/220 (51%), Gaps = 4/220 (1%)
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
L+++ M+ KG + + Y VI K G++ EA + +M+++G+ D V Y TLI+
Sbjct: 208 LKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDG 267
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+CK G + +AY L DEM+K+ D T+T +I GLC+ G + A M + +
Sbjct: 268 FCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 327
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLL 366
Y ++D K+GK+ A ++ M + TY+++ LCK + +A++LL
Sbjct: 328 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH 387
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
+ G+ + ++V+GL +G +A K+ + +A
Sbjct: 388 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVA 427
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 4/144 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ +C + G +L M E GI P+ TYNSLI + + + ++ M
Sbjct: 473 VLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAK 532
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G+ PD +YN L+ HC + K EA + +DM+ +++N ++ G K +
Sbjct: 533 GVVPDGNTYNILIKGHCKARNMK--EAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFL 590
Query: 119 NALRMFRGLQKHGFVPELVTYNIL 142
A +F +++ G V + YNI
Sbjct: 591 EARELFEQMRREGLVADREIYNIF 614
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 179/377 (47%), Gaps = 14/377 (3%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
L++M + ISP+VVTYNS+IA + + ++++L M++ G+ PD +YNS++H
Sbjct: 104 LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCS 163
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
G+P EA + M + P T+N +++ LCKN A ++F + K G P++ T
Sbjct: 164 SGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITT 223
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
Y L++G G L +L + +G PN ++ ++ + K + + + S M+
Sbjct: 224 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMR 283
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
++G + Y TVI K GR+++A Y EQM+ +G++ D + YN+LI+ C K E
Sbjct: 284 QQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWE 343
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A L EM +G +ID CK G + + + M +IG ++
Sbjct: 344 KAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITL---- 399
Query: 319 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
G+ D A ++F + V + +TY M N+ L +L LS +G
Sbjct: 400 ------GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCT 453
Query: 375 ILKSAQKAVVDGLRHSG 391
+ +V L G
Sbjct: 454 VDSGMLNFIVRELLQRG 470
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 185/363 (50%), Gaps = 14/363 (3%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHC 75
+ + + GI PDV +YN L+ G + +L+LL M + G PPDV SY+++++
Sbjct: 39 VFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
F+ G D+ M+ ++P T+N ++ LCK + D A+ + + K G +P+
Sbjct: 98 FFKEGDLDK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 150
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
+TYN ++ G C +G+ + A LK++ G P+ +TY ++M +N + +I
Sbjct: 151 CMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD 210
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
+M ++G D Y T++ + G L E ++ MV +G+ + ++ L+ Y K+
Sbjct: 211 SMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQE 270
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
K+E A L+ +M +QG + T+ +ID LCK+G ++ A L+ E M G + YN
Sbjct: 271 KVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYN 330
Query: 316 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++ L K + A +F M + + ++S++ + CK R+ + KL ++
Sbjct: 331 SLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRI 390
Query: 372 GVR 374
GV+
Sbjct: 391 GVK 393
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 168/355 (47%), Gaps = 19/355 (5%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--CGDLTPCTATFNIMLNG 110
+ DE+L GIP DV+SYN L++ L + EA + M GD P +++ ++NG
Sbjct: 39 VFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97
Query: 111 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
K D L P +VTYN +I LCKA + A +L + SG P+
Sbjct: 98 FFKEGDLDKML-------DQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 150
Query: 171 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 230
+TY +I+ + + K + L M+ G D Y +++ K GR EA +
Sbjct: 151 CMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD 210
Query: 231 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
M G++ DI +Y TL+ Y +G L + LLD M + G + Y +IL+ K
Sbjct: 211 SMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQE 270
Query: 291 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 346
++ A L M + G + N Y ++D L K G+++ A+ FE M + DS Y+
Sbjct: 271 KVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYN 330
Query: 347 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
S++H+LC + A +L L L G+ + +++D S C +E + I+S
Sbjct: 331 SLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIID----SHC-KEGRVIES 380
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 137/281 (48%), Gaps = 8/281 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I A C+ + D +L M ++G+ PD +TYNS++ G + ++ L +M G
Sbjct: 122 IIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDG 181
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +YNSLM L + G+ EA ++F M L P T+ +L G T AL
Sbjct: 182 VEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYA----TKGAL 237
Query: 122 RMFRGL----QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
GL ++G P ++IL+ K ++ A + ++ G PNA+TY T+
Sbjct: 238 VEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTV 297
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ ++ + + + M +G D Y ++I + + ++A + +M+ G+
Sbjct: 298 IDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGI 357
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
L + +N++I+ +CKEG++ + L D M + G + D T
Sbjct: 358 CLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT 398
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 147/345 (42%), Gaps = 25/345 (7%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ +C L +MR G+ PDVVTYNSL+ +N + + + D M + G
Sbjct: 157 IVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRG 216
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ +Y +L+ G E + + M+ + P F+I++ K + A+
Sbjct: 217 LKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAM 276
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++ G P VTY +I LCK+GR+ A +++ D G P++I Y +++
Sbjct: 277 LVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSL 336
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K++ E+ M +G + ++I + K GR+ E+ + MV GV+ DI
Sbjct: 337 CIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDI 396
Query: 242 V---------------SYNTLINLYCK----------EGKLEAAYLLLDEMEKQGFECDK 276
+ S N L+ Y +G LE L ME G D
Sbjct: 397 ITLGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDS 456
Query: 277 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
++ L + G I A +L +++ F + +D L
Sbjct: 457 GMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLL 501
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 123/273 (45%), Gaps = 11/273 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ AY + + + ++MR+ G++P+ VTY ++I ++ + ++ ++M++
Sbjct: 261 ILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDE 320
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD YNSL+H L K ++A +F +M+ + T FN +++ CK +
Sbjct: 321 GLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIES 380
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F + + G P+++T GR A+ + +G PN TY + +
Sbjct: 381 GKLFDLMVRIGVKPDIITL----------GRNDEAKDLFVAFSSNGLVPNYWTYRLMAEN 430
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ +M+ G T D ++ ++ G + A Y+ + L+
Sbjct: 431 IIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLE 490
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ + I+L GK + ++ L E K E
Sbjct: 491 ASTASLFIDLLSG-GKYQEYHIFLPEKYKSFIE 522
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 77/149 (51%), Gaps = 6/149 (4%)
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD--SNLEAYN 315
E A + DE+ ++G D +++ IL++GLC + A L M G D ++ +Y+
Sbjct: 34 EDARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 316 CIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
+++ K+G +D ++ S V TY+S++ LCKA+ + A ++L + +KSGV
Sbjct: 93 TVINGFFKEGDLDKMLDQRISPNV---VTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMP 149
Query: 376 LKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++V G SG +EA K+R
Sbjct: 150 DCMTYNSIVHGFCSSGQPKEAIVFLKKMR 178
>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 447
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 171/364 (46%), Gaps = 12/364 (3%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D + NRM +P ++ +N ++ + S ++ L + GI PD+++ N L
Sbjct: 41 DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYS-TVSLSHRLELKGIQPDLFTLNIL 99
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
++C +G+ V ++ P T T N ++ GLC AL L GF
Sbjct: 100 INCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 159
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
V Y LI G+CK G R A +LK++ P+ + Y+TI+ + +
Sbjct: 160 QLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYG 219
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ S M KG + D Y T+I F +G+LKEA + MV + D+ +Y L++ C
Sbjct: 220 LFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALC 279
Query: 253 KEGKLEAA-------YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
KEGK++ A + L+DEM +G D T++ LIDGLCK G++ A M
Sbjct: 280 KEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQ 339
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSA 361
G N+ + ++D L K G++ A VF+ + K + +TY+ M++ CK L A
Sbjct: 340 GIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEA 399
Query: 362 SKLL 365
+L
Sbjct: 400 LTML 403
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 189/383 (49%), Gaps = 12/383 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D++ + + + ++ +R+ GI PD+ T N LI ++ +L ++L+ G
Sbjct: 65 ILDSFAKMKHY-STVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRG 123
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PP + N+L+ L G+ +A ++ + ++NG+CK T A+
Sbjct: 124 YPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGVCKIGDTRAAI 183
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + + P++V Y+ +I LCK + A + E+ G + + +TY T++
Sbjct: 184 KLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGF 243
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT-------DYMEQMVT 234
K K + +L+ M K D + Y ++ A K G++KEA D +++M
Sbjct: 244 CIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRD 303
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G D+++Y++LI+ CK G L+ A L ++M+ QG + +T TIL+DGL K G +K
Sbjct: 304 RGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKD 363
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVH 350
A+ + + G+ N+ YN +++ K G ++ A+ + ME + ++FT+ +++
Sbjct: 364 AQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIII 423
Query: 351 NLCKAKRLPSASKLLLSCLKSGV 373
L K A KLL + G+
Sbjct: 424 ALFKKDENDKAEKLLRQMIARGL 446
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 185/379 (48%), Gaps = 22/379 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM- 60
+I C+ D+ ++L M + G PD+ T++ LI N L C D + E E
Sbjct: 55 VIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLI-----NEL--CKADKIQEAQEFL 107
Query: 61 -GIPPDV-------WSYNSLMHCLFQLGKPDEANRVFQDMICG-DLTPCTATFNIMLNGL 111
G+ + +SYNSL++ L + K +A +F M+ + P +++I+++G
Sbjct: 108 QGMNRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGF 167
Query: 112 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 171
CK A ++++ + VP + TYN + GL + GR+ A+ + +E+ +G +P+
Sbjct: 168 CKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDV 227
Query: 172 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 231
ITY+T++ RK+ E+ AM +G + Y ++ K + EA + +
Sbjct: 228 ITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRK 287
Query: 232 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
MV G D V+Y TL+ +C GK+E A + DEM +G + D + L+ G +AG
Sbjct: 288 MVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGK 347
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-----VKDSFTYS 346
AR + M + ++N ++D L K ++D A+ VFE ME D TY+
Sbjct: 348 PGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYN 407
Query: 347 SMVHNLCKAKRLPSASKLL 365
S++ LC +RL A K+
Sbjct: 408 SLIFGLCGEQRLSEAMKVF 426
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 145/292 (49%), Gaps = 1/292 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID +C+ + +M + P+V TYN+ + G R ++ + + +EM+
Sbjct: 162 ILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISA 221
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +Y++L+H K D+A+ +F+ MI P T+N +L+GLCK D A
Sbjct: 222 GCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEA 281
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+FR + + G P+ VTY L+ G C G++ A + E+ GH P+ + Y ++K
Sbjct: 282 HELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKG 341
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQL 239
FR K ++ M + D + +I K RL +A + E+M D G
Sbjct: 342 FFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSP 401
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
D+V+YN+LI C E +L A + E+++ D + +L++ + AG+
Sbjct: 402 DLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 163/326 (50%), Gaps = 2/326 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L+++ C+ + I + M E + PDVV+Y+ LI G + L + L +M+++
Sbjct: 127 LLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDL 186
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+V +YN+ ++ L + G+ +A V+++MI +P T++ +++G R D A
Sbjct: 187 NCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQA 246
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + G P VTYN L+ GLCK + A + +++ + G P+ +TYTT++
Sbjct: 247 HELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYG 306
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K + +E+ M KG+ D Y ++ F + G+ EA + MV+ + D
Sbjct: 307 FCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPD 366
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEK-QGFECDKYTHTILIDGLCKAGNIKGARLHL 299
VS+N +I+ K +L+ A + + ME+ G D T+ LI GLC + A
Sbjct: 367 TVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVF 426
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDG 325
+ ++++ + A+N +++ + G
Sbjct: 427 KEIDRLKLSPDPHAFNVLLEAMYAAG 452
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 166/388 (42%), Gaps = 80/388 (20%)
Query: 58 LEMGIPPDVWSYNSLMHCLFQLGKPD---EANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E P + ++ + + L + GK + EA R Q+ + P + T + ++ LCK
Sbjct: 3 VESKAPLNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKA 62
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD--SGHAPNAI 172
D+AL + + K G+ P++ T+++LI LCKA +++ A+ L+ + S A +
Sbjct: 63 GRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCF 122
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAM-KRKGYTFDGFGYCTVIAAFVKI------------ 219
+Y +++ + +K I S M + D Y +I F KI
Sbjct: 123 SYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQ 182
Query: 220 -----------------------GRLKEATDYMEQMVTDGVQLDIVSYNTLINLY----- 251
GR+ +A E+M++ G D+++Y+TLI+ +
Sbjct: 183 MIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARK 242
Query: 252 ------------------------------CKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
CKE K + A+ L +M ++G + DK T+T
Sbjct: 243 HDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTT 302
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD---RLGKDGKIDHAINVFESME 338
L+ G C G I+ A + M G D ++ AYNC++ R GK G+ V S E
Sbjct: 303 LLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRE 362
Query: 339 VK-DSFTYSSMVHNLCKAKRLPSASKLL 365
K D+ +++ M+ L KAKRL A ++
Sbjct: 363 CKPDTVSHNIMIDGLSKAKRLDDAVEVF 390
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 114/249 (45%), Gaps = 12/249 (4%)
Query: 137 VTYNILIKGLCKAGRLRTA----RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
V + + GLCK+G++ A R + + L S + ++ I + C R L
Sbjct: 12 VAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGR-VDSALS 70
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM--VTDGVQLDIVSYNTLINL 250
+L M ++GY D + +I K +++EA ++++ M SYN+L+N
Sbjct: 71 LLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNS 130
Query: 251 YCKEGKLEAAYLLLDEM-EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
CK K+ A+ + M ++ D +++ILIDG CK + A + M +
Sbjct: 131 LCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVP 190
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 365
N+ YN ++ L + G+I A V+E M D TYS+++H A++ A +L
Sbjct: 191 NVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELF 250
Query: 366 LSCLKSGVR 374
+ + G R
Sbjct: 251 EAMISRGCR 259
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 192/436 (44%), Gaps = 71/436 (16%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI A + + +L M G PDV T+N +I G R + + L+D ML G
Sbjct: 249 LIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRG 308
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEA----NRV----------------------------F 89
P+ +Y LM+ L ++GK DEA N+V +
Sbjct: 309 FTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLY 368
Query: 90 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
MI P TFN +++GLCK +A+ M + +G P L+TY L+ G CK
Sbjct: 369 DKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKK 428
Query: 150 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-----YTF 204
+L A ++L E+ G N + Y +++ +N K L++L M KG +TF
Sbjct: 429 NQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTF 488
Query: 205 DG--FGYC----------------------------TVIAAFVKIGRLKEATDYMEQMVT 234
+ FG C T+I AF++ G ++EA + M+
Sbjct: 489 NTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLF 548
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G LD ++YN LI +CK G E A L DEM ++ + +LI+GLC+ G +
Sbjct: 549 RGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCN 608
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 350
A L M G ++ YN +++ L K G I A N+F ++ + D+ TY++++
Sbjct: 609 ALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLIC 668
Query: 351 NLCKAKRLPSASKLLL 366
C+A A LLL
Sbjct: 669 WHCRAGMFDDAYLLLL 684
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 213/446 (47%), Gaps = 38/446 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ A C D ++L M + G P+ V Y +LI ++ ++ +L LL+EM M
Sbjct: 213 VVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLM 272
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV ++N +++ L +L + E ++ M+ TP T+ +++NGLC+ D A
Sbjct: 273 GCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEA 332
Query: 121 --------------------------------LRMFRGLQKHGFVPELVTYNILIKGLCK 148
++ + K+G P++ T+N LI GLCK
Sbjct: 333 QVLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCK 392
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGF 207
G + +A ++ ++ +G PN ITYTT++ C +N+ + G +L+ M KG+ +
Sbjct: 393 KGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGY-VLNEMSAKGFELNIM 451
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
GY ++ A K G++ +A D + +M G + DI ++NTLI CK + E A L +M
Sbjct: 452 GYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDM 511
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
G + T+ LI + G I+ A + M G + YN ++ K G
Sbjct: 512 LLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGAT 571
Query: 328 DHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
+ A+ +F+ M KD + + + +++ LC+ ++ +A +LL + G+ ++
Sbjct: 572 EKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSL 631
Query: 384 VDGLRHSGCRREAKKIQSKIRMAKIS 409
++GL G REA + +K++ I
Sbjct: 632 INGLCKMGNIREAFNLFNKLQAEGIQ 657
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 185/377 (49%), Gaps = 9/377 (2%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
P +YN ++ + S + ++ EML G+ P V+++ +M L + + D A
Sbjct: 170 EPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACS 229
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
+ +DM P + + +++ L K + AL++ + G +P++ T+N +I GLC
Sbjct: 230 LLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLC 289
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
+ R+ ++ + G PN ITY +M R K +L+ + T +
Sbjct: 290 RLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVP----TPNDV 345
Query: 208 GYCTVIAAFVKIGRLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ +I +VK GRL EA ++ ++M+ +G + D+ ++NTLI+ CK+G + +A ++++
Sbjct: 346 HFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVND 405
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M G + T+T L+DG CK ++ A L M+ GF+ N+ YN ++ L K+GK
Sbjct: 406 MSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGK 465
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+ A+++ M K D FT+++++ LCK R A L L GV
Sbjct: 466 VPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNT 525
Query: 383 VVDGLRHSGCRREAKKI 399
++ G +EA K+
Sbjct: 526 LIHAFLRGGAIQEALKL 542
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 173/359 (48%), Gaps = 5/359 (1%)
Query: 1 MLIDAYCQFVSFDAGYTIL-NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
+LI+ Y + D L ++M + G PDV T+N+LI G + L+ ++D++++M
Sbjct: 349 ILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSA 408
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G P++ +Y +L+ + + +EA V +M +N++L LCKN
Sbjct: 409 NGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPK 468
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
AL M + G P++ T+N LI GLCK R A + +++ G N +TY T++
Sbjct: 469 ALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIH 528
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
R + L++++ M +G D Y +I AF K+G ++A ++MV +
Sbjct: 529 AFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVP 588
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+S N LIN C+ GK+ A LL +M +G D T+ LI+GLCK GNI+ A
Sbjct: 589 SNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLF 648
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHNLCK 354
+ G + YN ++ + G D A + E+ + + T+ +V N K
Sbjct: 649 NKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIK 707
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ +L M G++PDVVTYNSLI G + + + +L +++
Sbjct: 595 LLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAE 654
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
GI PD +YN+L+ HC + G D+A + + P T+ I+++ K +
Sbjct: 655 GIQPDAITYNTLICWHC--RAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGKE 712
Query: 119 NAL 121
N +
Sbjct: 713 NGI 715
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 99/233 (42%), Gaps = 9/233 (3%)
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV---QLDI 241
+++K+ ++L +K +G F + ++ + + +AT + M GV +
Sbjct: 116 KEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDM--KGVYCCEPTF 173
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
SYN ++++ A + EM +G YT +++ LC + A L
Sbjct: 174 KSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRD 233
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M K G N Y ++ L K +++ A+ + E M + D T++ +++ LC+ R
Sbjct: 234 MTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNR 293
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
+ +KL+ L G +++GL G EA+ + +K+ H
Sbjct: 294 IHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVH 346
>gi|356518400|ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Glycine max]
Length = 546
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 177/327 (54%), Gaps = 2/327 (0%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP-PDVWSYNSLMHCL 76
+L+ R+ P+V +N L+ +N L + ++++EM P++ +Y++LM L
Sbjct: 220 LLHAKRDLTRKPNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLMDGL 279
Query: 77 FQLGKPDEANRVFQDMICGD-LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
+ G+ EA +F++M+ D + P T+N+++NG C+ D A + + ++ +G P
Sbjct: 280 CRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNGCYPN 339
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
+ Y+ L+ GLCK G+L A+ +L E+ SG P+A+TYT+++ RN K +E+L
Sbjct: 340 VYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIELLE 399
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
MK G D + ++ + G+ +EA D +E++ GV L+ SY ++N ++
Sbjct: 400 EMKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRIVLNSLTQKC 459
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
+L+ A LL M ++GF+ T L+ LCKAG + A + L + ++GF LE +
Sbjct: 460 ELKRAKELLGLMLRRGFQPHYATSNELLVCLCKAGMVDDAAVALFDLVEMGFQPGLETWE 519
Query: 316 CIVDRLGKDGKIDHAINVFESMEVKDS 342
++ + ++ K+ + + + + V ++
Sbjct: 520 VLIGLICRERKLLYVFELLDELVVTNT 546
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 35/267 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ D ++ M+ G P+V Y++L+ G + L + +L E+
Sbjct: 310 VLINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGS 369
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD +Y SL++ L + GK DEA + ++M + TFN++L GLC+ + A
Sbjct: 370 GLKPDAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEA 429
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L M L + G +Y I++ L + L+ A+ +L + G P+ T ++ C
Sbjct: 430 LDMVEKLPQQGVYLNKGSYRIVLNSLTQKCELKRAKELLGLMLRRGFQPHYATSNELLVC 489
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K G + +A + +V G Q
Sbjct: 490 -----------------------------------LCKAGMVDDAAVALFDLVEMGFQPG 514
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEM 267
+ ++ LI L C+E KL + LLDE+
Sbjct: 515 LETWEVLIGLICRERKLLYVFELLDEL 541
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 98/192 (51%), Gaps = 6/192 (3%)
Query: 218 KIGRLKEATDYMEQMVTDGVQL-DIVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECD 275
K G L A + +E+M ++V+Y+TL++ C+ G+++ A+ L +EM + D
Sbjct: 245 KNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLMDGLCRNGRVKEAFDLFEEMVSRDHIVPD 304
Query: 276 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
T+ +LI+G C+ G AR +++M G N+ Y+ +VD L K GK++ A V
Sbjct: 305 PLTYNVLINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLA 364
Query: 336 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
++ D+ TY+S+++ LC+ + A +LL ++G + ++ GL G
Sbjct: 365 EIKGSGLKPDAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREG 424
Query: 392 CRREAKKIQSKI 403
EA + K+
Sbjct: 425 KFEEALDMVEKL 436
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 90/171 (52%), Gaps = 6/171 (3%)
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE-CDKYTHTILIDGLCKAGNIKGA-RL 297
++ +N L+ +CK G L++A+ +++EM F + T++ L+DGLC+ G +K A L
Sbjct: 232 NVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLMDGLCRNGRVKEAFDL 291
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 353
E +++ + YN +++ + GK D A NV + M+ + + YS++V LC
Sbjct: 292 FEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYSALVDGLC 351
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
K +L A +L SG++ ++++ L +G EA ++ +++
Sbjct: 352 KVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIELLEEMK 402
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 110/251 (43%), Gaps = 14/251 (5%)
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG---R 221
+G N TY TI+ R + +L M + F + ++ F K +
Sbjct: 120 NGFQHNNATYATILDKLARCNNFHAVDRVLHQMTYETCKFHEGIFVNLMKHFSKSSLHEK 179
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY-LLLDEMEKQGFECDKYTHT 280
L A ++ +V + +S T +NL +++ A LLL + +
Sbjct: 180 LLHAYFSIQPIVREKPSPKALS--TCLNLLLDSNRVDLARKLLLHAKRDLTRKPNVCVFN 237
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFD-SNLEAYNCIVDRLGKDGKIDHAINVFESME- 338
IL+ CK G++ A +E M F NL Y+ ++D L ++G++ A ++FE M
Sbjct: 238 ILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLMDGLCRNGRVKEAFDLFEEMVS 297
Query: 339 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS-GVRILKSAQKAVVDGLRHSGCR 393
V D TY+ +++ C+ + P ++ ++ +KS G A+VDGL G
Sbjct: 298 RDHIVPDPLTYNVLINGFCRGGK-PDRARNVIQFMKSNGCYPNVYNYSALVDGLCKVGKL 356
Query: 394 REAKKIQSKIR 404
+AK + ++I+
Sbjct: 357 EDAKGVLAEIK 367
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 171/333 (51%), Gaps = 8/333 (2%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G++ + VT N+L+ G + ++L +MLE G+ D SYN+L+ + GK +EA
Sbjct: 496 GLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEA 555
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
++ ++M+ + P T T+N ++ GL D+ R+ +++GFVP + TY +L++G
Sbjct: 556 FKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEG 615
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
CKA R+ A K L +++ Y ++ R ++ AMK +G
Sbjct: 616 YCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPT 675
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y ++I IGR+ EA + E+M +G+ ++ Y LI +CK G+++ +L
Sbjct: 676 CATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILL 735
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM G +K T+TI+IDG CK GN+K AR L M + G + YN + K+
Sbjct: 736 EMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGYCKER 795
Query: 326 KI------DHAINVFESMEVKDSFTYSSMVHNL 352
++ DH N+ + +++ TY++++H L
Sbjct: 796 ELTVTLQSDHKSNI--GLPLEEEITYNTLIHKL 826
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 201/442 (45%), Gaps = 40/442 (9%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
I+A+C+ + +M G+ P+VVTYN++I G ++ +L D M+ +
Sbjct: 262 INAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKV 321
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P V +Y L+ L +L +EAN V +M P FN +++G C+ ALR
Sbjct: 322 NPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALR 381
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ + G P VT+N L++G C++ ++ A +L + SG + N + ++
Sbjct: 382 VRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLM 441
Query: 183 RNRKYKLGLEILSAM--------------------KRKGYT-----------FDGFGYCT 211
+ L+I++ + K +G++ G T
Sbjct: 442 ERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANT 501
Query: 212 VIA-----AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
V + + G ++E + ++QM+ G+ LD +SYNTLI CK GK+E A+ L +E
Sbjct: 502 VTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEE 561
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M +Q F+ D YT+ L+ GL G I L + GF N+ Y +++ K +
Sbjct: 562 MVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADR 621
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
I+ A+ F++++ + S Y+ ++ C+ + A KL + G+ + +
Sbjct: 622 IEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSS 681
Query: 383 VVDGLRHSGCRREAKKIQSKIR 404
++ G+ G EAK+I ++R
Sbjct: 682 LIHGMCCIGRVDEAKEIFEEMR 703
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 179/404 (44%), Gaps = 40/404 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID + F+ +RM + ++P VVTY LI+G + + + ++L EM MG
Sbjct: 296 VIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMG 355
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +N+L+ + G EA RV +M + P TFN +L G C++ + A
Sbjct: 356 FAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAE 415
Query: 122 RMF--------------------RGLQKHGFVP------ELVTYNI---------LIKGL 146
++ R +++ GFV +L++ NI L+ GL
Sbjct: 416 QVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGL 475
Query: 147 CK-AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
CK G K G A N +T ++ + E+L M KG D
Sbjct: 476 CKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLD 535
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y T+I K G+++EA E+MV Q D +YN L+ GK++ + LL
Sbjct: 536 RISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLH 595
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
E ++ GF + YT+ +L++G CKA I+ A + ++ + + YN ++ + G
Sbjct: 596 EAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIG 655
Query: 326 KIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLL 365
+ A + ++M+ + TYSS++H +C R+ A ++
Sbjct: 656 NVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIF 699
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 171/380 (45%), Gaps = 40/380 (10%)
Query: 26 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G++PDV T+ + I + + ++DL +M +G+ P+V +YN+++ LF+ G+ +EA
Sbjct: 250 GVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEA 309
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
R M+ + P T+ ++++GL K + A + + GF P V +N LI G
Sbjct: 310 LRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDG 369
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
C+ G + A + E+ G PN +T+ T+++ R+ + + ++L + G + +
Sbjct: 370 YCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVN 429
Query: 206 ---------------GFGYCTVIAAFVKIGRLKEATDYMEQMV----------------- 233
GF I + G ++ + + +V
Sbjct: 430 MDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWF 489
Query: 234 ----TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
G+ + V+ N L++ C+ G +E + +L +M ++G D+ ++ LI G CK
Sbjct: 490 KLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKW 549
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 345
G I+ A E M + F + YN ++ L GKID + + V + +TY
Sbjct: 550 GKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTY 609
Query: 346 SSMVHNLCKAKRLPSASKLL 365
+ ++ CKA R+ A K
Sbjct: 610 ALLLEGYCKADRIEDAVKFF 629
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 182/414 (43%), Gaps = 44/414 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ + + M G+ P+ VT+N+L+ G R++ + + +L +L G
Sbjct: 366 LIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSG 425
Query: 62 IPP--DVWSYNSLMHCLFQLGKPDEANRVFQDMICGD-------LTPC------------ 100
+ DV SY ++H L + A ++ ++ G+ LTP
Sbjct: 426 LSVNMDVCSY--VIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSE 483
Query: 101 -----------------TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
T T N +L+GLC+ + + + + + G + + ++YN LI
Sbjct: 484 AIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLI 543
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK G++ A + +E+ P+ TY +MK K +L K G+
Sbjct: 544 FGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFV 603
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
+ + Y ++ + K R+++A + + + + V+L V YN LI YC+ G + A+ L
Sbjct: 604 PNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKL 663
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
D M+ +G T++ LI G+C G + A+ E M G N+ Y ++ K
Sbjct: 664 RDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCK 723
Query: 324 DGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
G++D ++ M + TY+ M+ CK + A +LL +++G+
Sbjct: 724 LGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGI 777
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 152/356 (42%), Gaps = 41/356 (11%)
Query: 49 CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 108
C+ D+ + G+ P + + N L+ L + + ++ VF D+ C + P TF +
Sbjct: 204 CAFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVF-DLACQGVAPDVFTFTTAI 262
Query: 109 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
N CK +A+ +F ++ G P +VTYN +I GL K+GR A + S
Sbjct: 263 NAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVN 322
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
P+ +TY ++ + ++ E+L M G+ + + +I + + G + EA
Sbjct: 323 PSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRV 382
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA--------------------YLLLDEME 268
++M G++ + V++NTL+ +C+ ++E A Y++ ME
Sbjct: 383 RDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLME 442
Query: 269 KQGF---------------ECDKYTHTILIDGLCK-AGNIKGARLHLEYMNKIGFDSNLE 312
+ GF T L+ GLCK G+ + L + G +N
Sbjct: 443 RSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTV 502
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
N ++ L + G ++ V + M K D +Y++++ CK ++ A KL
Sbjct: 503 TSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKL 558
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 132/310 (42%), Gaps = 34/310 (10%)
Query: 99 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 158
PC T N++L+ L K + +F L G P++ T+ I CK GR+ A +
Sbjct: 219 PCLKTCNLLLSSLVKANELHKSYEVF-DLACQGVAPDVFTFTTAINAFCKGGRVGDAVDL 277
Query: 159 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 218
++ G PN +TY ++ F++ +++ L M R Y +I+ +K
Sbjct: 278 FCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMK 337
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
+ +EA + + +M + G + V +N LI+ YC++G + A + DEM +G + + T
Sbjct: 338 LEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVT 397
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
L+ G C++ ++ A L Y+ G N++ C
Sbjct: 398 FNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDV--C---------------------- 433
Query: 339 VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
S ++H L + SA K++ L +R+ S +V GL C ++
Sbjct: 434 -------SYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGL--CKCEGHSEA 484
Query: 399 IQSKIRMAKI 408
I+ ++A +
Sbjct: 485 IELWFKLAAV 494
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI AYC+ + + + + M+ GI P TY+SLI G + + ++ +EM
Sbjct: 646 ILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNE 705
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G+ P+V+ Y +L+ HC +LG+ D + +M + P T+ IM++G CK
Sbjct: 706 GLLPNVFCYTALIGGHC--KLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMK 763
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
A + + ++G P+ VTYN L KG CK L
Sbjct: 764 EARELLNEMIRNGIAPDTVTYNALQKGYCKEREL 797
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID YC+ + +LN M GI+PD VTYN+L G + L+ +L D +
Sbjct: 751 IMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGYCKERELTVTLQ-SDHKSNI 809
Query: 61 GIP-PDVWSYNSLMHCL 76
G+P + +YN+L+H L
Sbjct: 810 GLPLEEEITYNTLIHKL 826
>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 188/399 (47%), Gaps = 13/399 (3%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM------LEMGIPPDVWSYNS 71
++ +M++ I P V+T+ LI + + +L++ ++M ++ + PD YN+
Sbjct: 174 LMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNT 233
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
L+ L ++G+ +EA + M P TATFN ++NG C++ + A ++F ++
Sbjct: 234 LIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQ 293
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
P ++T N L+ G+CK R+ TA + + G N +TYT + +
Sbjct: 294 IEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAM 353
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
E L M + G D Y T+I + GRL +A+ + ++ G LD V YN LI+ +
Sbjct: 354 EFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEF 413
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN-KIGFDSN 310
CK+ KL+ A L+EME G + D T+ LI K GN K A ++ M + G
Sbjct: 414 CKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPT 473
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESME------VKDSFTYSSMVHNLCKAKRLPSASKL 364
+ Y ++ + ID AI +F+ M ++ Y+ ++ +LCK ++ A L
Sbjct: 474 VFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSL 533
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L GV + ++ LR +A K+ ++
Sbjct: 534 LDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRM 572
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 151/339 (44%), Gaps = 3/339 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ + ++ +MR +P T+N LI G R+ + + L +EM
Sbjct: 234 LIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQ 293
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V + N+L+ + + + A F+ M L T+ + +N C + A+
Sbjct: 294 IEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAM 353
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ K G P+ V Y LI GL +AGRL A ++ +L ++G + + Y ++
Sbjct: 354 EFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEF 413
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV-TDGVQLD 240
+ K E L+ M+ G D Y T+I+ F KIG K A +M++M +G+
Sbjct: 414 CKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPT 473
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT--HTILIDGLCKAGNIKGARLH 298
+ +Y LI+ YC ++ A + EM + T + ILID LCK + A
Sbjct: 474 VFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSL 533
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
L+ M G N YN I L +D A + + M
Sbjct: 534 LDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRM 572
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 174/409 (42%), Gaps = 46/409 (11%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
ID V D ++++ + I PD + LI+ R+ + + ++LD ++ +
Sbjct: 89 IDGLEGRVKEDEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNG 148
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
D N+L+ L + + + N + + M ++ P TF I++N LCK R D+AL
Sbjct: 149 LKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALE 208
Query: 123 MFRGLQ------KHGFVPELVTYNILIKGLCKAGR------------------------- 151
+F ++ K P+ + YN LI GLCK GR
Sbjct: 209 VFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNC 268
Query: 152 ----------LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
+ A + E+ ++ PN IT T++ ++ + +E M++KG
Sbjct: 269 LINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKG 328
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ Y I AF + + +A +++++M DG D V Y TLI + G+L+ A
Sbjct: 329 LKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDAS 388
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
++ ++++ GF D+ + +LI CK + A+ L M G + YN ++
Sbjct: 389 SVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYF 448
Query: 322 GKDGKIDHAINVFESMEVKDS-----FTYSSMVHNLCKAKRLPSASKLL 365
K G A + M ++ FTY +++H C + A K+
Sbjct: 449 SKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIF 497
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 108/260 (41%), Gaps = 3/260 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ I+A+C + + L+ M + G PD V Y +LI G + L + ++ ++ E
Sbjct: 338 VFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEA 397
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D YN L+ + K D A +M + P + T+N +++ K A
Sbjct: 398 GFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLA 457
Query: 121 LRMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD--SGHAPNAITYTTI 177
+ + + ++ G P + TY LI C + A I KE+ + S PN + Y +
Sbjct: 458 HKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNIL 517
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + + L +L MK +G + Y ++ A L +A M++MV
Sbjct: 518 IDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQAC 577
Query: 238 QLDIVSYNTLINLYCKEGKL 257
D ++ L G++
Sbjct: 578 NPDYITMEILTEWLSAVGEI 597
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 183/389 (47%), Gaps = 17/389 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI AY + + M++ PDV TYN+++ R ++ +L + + ML++
Sbjct: 131 VLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKL 190
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P++ +++ L+ + + GK A ++F +M + P T+ I+++GLC+ + D A
Sbjct: 191 NCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVA 250
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+F ++ HG +P+ VTYN L+ G CK GR+ A +LK + + Y+ ++
Sbjct: 251 YRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDG 310
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
FR R+++ M D Y ++ K G+ K+A + +M G+ D
Sbjct: 311 LFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPD 370
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
YN LI YC G L+ A L E+ K T+TILI G+C++G + A+
Sbjct: 371 THCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFN 430
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-----------------VKDSF 343
M K G ++ +N ++D K G I+ A +F ME V D+
Sbjct: 431 EMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTA 490
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
+ +MV LC + + A +L+ SG
Sbjct: 491 SLQTMVEQLCDSGLILKAYNILMQLTDSG 519
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 179/370 (48%), Gaps = 6/370 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M+ID + F+ + +L ++ G S + LI + ++ +++ + M +
Sbjct: 96 MIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDF 155
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV++YN+++H + + A ++ M+ + P ATF+I+++G+CK+ T NA
Sbjct: 156 DCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNA 215
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L+MF + + +P +TY I+I GLC+A + A + + D G P+++TY ++
Sbjct: 216 LQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHG 275
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + L +L ++ Y D GY +I + R ++A + +M ++ D
Sbjct: 276 FCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPD 335
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHL 299
++ Y ++ K GK + A LL+EM ++G D + + LI G C G + A+ LHL
Sbjct: 336 VILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHL 395
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKA 355
E F S Y ++ + + G + A +F ME + T+++++ CKA
Sbjct: 396 EISKNDCFSSAC-TYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKA 454
Query: 356 KRLPSASKLL 365
+ A L
Sbjct: 455 GNIEKAQLLF 464
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 164/359 (45%), Gaps = 26/359 (7%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID + F+ +M E I PDV+ Y ++ G ++ +L LL+EM E G
Sbjct: 307 LIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERG 366
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD YN+L+ LG DEA + ++ D T+ I++ G+C++ +A
Sbjct: 367 LVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQ 426
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F ++KHG P +VT+N LI G CKAG + A+ + ++ + G P+
Sbjct: 427 QIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKM-EIGRNPS----------- 474
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
L L + R D T++ G + +A + + Q+ G +I
Sbjct: 475 -------LFLRLSQGANR---VLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNI 524
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN LI+ +CK G + A+ L E++ +G D T+ LI+GL A + A L+
Sbjct: 525 ITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQ 584
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAK 356
+ K G E Y + + KI A +++ S+ +DS S+ N K +
Sbjct: 585 ILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEVLKSVEENFEKGE 643
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 172/380 (45%), Gaps = 4/380 (1%)
Query: 32 VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 91
V++N +I +++ +L E+ G ++ L+ ++ ++A F+
Sbjct: 92 VSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEM 151
Query: 92 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
M D P T+N +L+ + + AL ++ + K +P + T++ILI G+CK+G+
Sbjct: 152 MKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGK 211
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
+ A + E+ PN ITYT I+ + +K + + AMK G D Y
Sbjct: 212 TQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNA 271
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
++ F K+GR+ EA ++ D LD Y+ LI+ + + E A + +M +
Sbjct: 272 LLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHN 331
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
+ D +TI++ GL KAG K A L M + G + YN ++ G +D A
Sbjct: 332 IKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAK 391
Query: 332 NVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
++ + D F TY+ ++ +C++ + A ++ K G A++DG
Sbjct: 392 SLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGF 451
Query: 388 RHSGCRREAKKIQSKIRMAK 407
+G +A+ + K+ + +
Sbjct: 452 CKAGNIEKAQLLFYKMEIGR 471
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 119/292 (40%), Gaps = 16/292 (5%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP------------- 64
I N M + G P VVT+N+LI G + + + LL +E+G P
Sbjct: 428 IFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKA-QLLFYKMEIGRNPSLFLRLSQGANRV 486
Query: 65 -DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
D S +++ L G +A + + P T+NI+++G CK + A ++
Sbjct: 487 LDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKL 546
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
F+ LQ G P+ VTY LI GL A R A +L ++ +G P Y + M R
Sbjct: 547 FKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCR 606
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
K L + R D +V F K G ++EA + +M +
Sbjct: 607 RNKITLAFSLWLKYLRSIPGRDSEVLKSVEENFEK-GEVEEAVRGLLEMDFKLNDFQLAP 665
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
Y + C+ G+LE A + +E+ + LI L K GN+ A
Sbjct: 666 YTIWLIGLCQAGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLA 717
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 109/247 (44%), Gaps = 4/247 (1%)
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
R F K + V++N++I L K +LKE+ G + +A +T +++
Sbjct: 75 GFRFFIWASKFRRLRSWVSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQ 134
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + +E MK D F Y TV+ V+ + A +M+
Sbjct: 135 AYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLP 194
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+I +++ LI+ CK GK + A + DEM ++ +K T+TI+I GLC+A A
Sbjct: 195 NIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLF 254
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
M G + YN ++ K G++D A+ + + E V D YS ++ L +A
Sbjct: 255 IAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRA 314
Query: 356 KRLPSAS 362
+R A
Sbjct: 315 RRFEDAQ 321
>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g22960, mitochondrial; Flags: Precursor
gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 718
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 193/412 (46%), Gaps = 53/412 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD---EML 58
LI+ YC+ FD + + + M AGI P TYN I C +D E+L
Sbjct: 314 LIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICAL-------CDFGRIDDARELL 366
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
PDV SYN+LMH ++GK EA+ +F D+ GD+ P T+N +++GLC++ +
Sbjct: 367 SSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A R+ + P+++TY L+KG K G L A + E+ G P+ YTT
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 179 KCCFR----NRKYKLGLEILSA--------------------------------MKRKGY 202
R ++ ++L E+++ + R G
Sbjct: 487 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 546
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
D Y TVI +++ G+ K A + ++M+ + +++Y LI + K G+LE A+
Sbjct: 547 VPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQ 606
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
EM+K+G + TH L+ G+CKAGNI A +L M + G N +Y ++ +
Sbjct: 607 YSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNC 666
Query: 323 KDGKIDHAINVFESM---EVK-DSFTYSSMVHNLCK---AKRLPSASKLLLS 367
K + + +++ M E++ D +T+ ++ +L K ++ + +LLLS
Sbjct: 667 DFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFLERLLLS 718
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 173/390 (44%), Gaps = 9/390 (2%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
+M G P V N ++ + +++ + + + M+E GI P V ++N+++ F+
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
G + ++++ +M ++ T+NI++NG KN + A R +++ GF +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
+N LI+G CK G A + E+ ++G P TY + + E+LS+M
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
D Y T++ ++K+G+ EA+ + + + IV+YNTLI+ C+ G LE
Sbjct: 371 AP----DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A L +EM Q D T+T L+ G K GN+ A + M + G + AY
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 319 DRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ G D A + E M D Y+ + LCK L A + + G+
Sbjct: 487 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 546
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
V+ G +G + A+ + ++
Sbjct: 547 VPDHVTYTTVIRGYLENGQFKMARNLYDEM 576
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 175/421 (41%), Gaps = 44/421 (10%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ M E GI P V+T+N+++ + L + EM I +YN L++
Sbjct: 225 VYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFS 284
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ GK +EA R DM +FN ++ G CK D+A + + G P
Sbjct: 285 KNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTS 344
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYNI I LC GR+ AR EL S AP+ ++Y T+M + K+ + +
Sbjct: 345 TYNIYICALCDFGRIDDAR----ELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDL 400
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ Y T+I + G L+ A E+M T + D+++Y TL+ + K G L
Sbjct: 401 RAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNL 460
Query: 258 EAAYLLLDEMEKQGFECDKYTHT------------------------------------I 281
A + DEM ++G + D Y +T +
Sbjct: 461 SMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNV 520
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 341
IDGLCK GN+ A + ++G + Y ++ ++G+ A N+++ M K
Sbjct: 521 RIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR 580
Query: 342 SF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
+ TY +++ KA RL A + K GVR A++ G+ +G EA
Sbjct: 581 LYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAY 640
Query: 398 K 398
+
Sbjct: 641 R 641
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 144/311 (46%), Gaps = 10/311 (3%)
Query: 42 TRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 101
T+ S+ L ++M+ G P V + N ++ L ++A+ V++ MI + P
Sbjct: 179 TKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTV 238
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
TFN ML+ K + +++ +++ VTYNILI G K G++ AR +
Sbjct: 239 ITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGD 298
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ SG A ++ +++ + + + M G Y I A GR
Sbjct: 299 MRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGR 358
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
+ +A + + M D+VSYNTL++ Y K GK A LL D++ T+
Sbjct: 359 IDDARELLSSMAAP----DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNT 414
Query: 282 LIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
LIDGLC++GN++GA RL E ++ F ++ Y +V K+G + A V++ M K
Sbjct: 415 LIDGLCESGNLEGAQRLKEEMTTQLIF-PDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 473
Query: 341 ----DSFTYSS 347
D + Y++
Sbjct: 474 GIKPDGYAYTT 484
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 118/256 (46%), Gaps = 8/256 (3%)
Query: 113 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
K + L F + + GF+P + NI++K L + + A + + + + G P I
Sbjct: 180 KKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVI 239
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
T+ T++ CF+ + +I MKR+ F Y +I F K G+++EA + M
Sbjct: 240 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDM 299
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
G + S+N LI YCK+G + A+ + DEM G T+ I I LC G I
Sbjct: 300 RRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRI 359
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSM 348
AR L M ++ +YN ++ K GK A +F+ + D TY+++
Sbjct: 360 DDARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTL 415
Query: 349 VHNLCKAKRLPSASKL 364
+ LC++ L A +L
Sbjct: 416 IDGLCESGNLEGAQRL 431
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + + + + M++ G+ P+V+T+N+L+ G + + + L +M E
Sbjct: 590 VLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEE 649
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
GIPP+ +SY L+ +C F+ K +E +++++M+ ++ P T + L K+
Sbjct: 650 GIPPNKYSYTMLISKNCDFE--KWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 703
>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 150/285 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV+YN+L+ G R L L ML
Sbjct: 147 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 206
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD ++Y+ L++ L + K D+AN +F +M+ L P TF +++G CK D A
Sbjct: 207 GVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLA 266
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + +P+L+TYN LI GLCK G L+ A ++ E+ G P+ ITYTT++
Sbjct: 267 MEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDG 326
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + E M ++ D Y +I+ + GR +A + +M++ G++ D
Sbjct: 327 CCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 386
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y +IN +CK+G + LL EM++ G T+ +L++G
Sbjct: 387 TGTYTMIINEFCKKGDVWKGSRLLKEMQRNGHVPSVVTYNVLMNG 431
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 159/309 (51%), Gaps = 2/309 (0%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ ++ + + + D + + G+ P V SYN+
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 182
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M+ + P T+++++NGLCK D+A +F + G
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKG 242
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP VT+ LI G CK GR+ A I K + P+ ITY T++ + K
Sbjct: 243 LVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAN 302
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+++ M KG D Y T+I K G L A ++ ++M+ + ++LD V+Y LI+
Sbjct: 303 DLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGL 362
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 310
C+EG+ A +L EM G + D T+T++I+ CK G++ KG+RL L+ M + G +
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRL-LKEMQRNGHVPS 421
Query: 311 LEAYNCIVD 319
+ YN +++
Sbjct: 422 VVTYNVLMN 430
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 137/284 (48%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E+LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ + G P+ TY++LI GLCK ++ A + E+ G PN +T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 250
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ + + L +EI M + D Y T+I K G LK+A D +++MV
Sbjct: 251 TTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVM 310
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG L+ A+ M ++ D +T LI GLC+ G
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 370
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K G + + + M+
Sbjct: 371 AEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQ 414
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 129/272 (47%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y + + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 172
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ ++Y T+M R G + SAM G D + Y +I K ++ +A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDAN 232
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ + V++ TLI+ +CK+G+++ A + M Q D T+ LI GL
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGL 292
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K A ++ M G + Y ++D K+G +D A + M + D
Sbjct: 293 CKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 352
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384
>gi|15240991|ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g38730
gi|10176899|dbj|BAB10131.1| unnamed protein product [Arabidopsis thaliana]
gi|332006971|gb|AED94354.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 174/352 (49%), Gaps = 40/352 (11%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L+ M E G+ PD+ TYN+LI+ + S+ +L + D M G+ P++ +YNS +H
Sbjct: 225 LLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFS 284
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G+ EA R+F++ I D+T T+ +++G C+ D ALR+ ++ GF P +V
Sbjct: 285 REGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVV 343
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN +++ LC+ GR+R A +L E+ P+ IT T+
Sbjct: 344 TYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTL-------------------- 383
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
I A+ KI + A ++M+ G++LD+ SY LI+ +CK +L
Sbjct: 384 ---------------INAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLEL 428
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
E A L M ++GF T++ L+DG LE K G +++ Y +
Sbjct: 429 ENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGL 488
Query: 318 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
+ R+ K ++D+A +FESME V DS +++M + + ++ AS L
Sbjct: 489 IRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALF 540
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 172/361 (47%), Gaps = 5/361 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
+ ++R G+ P + L+ + L + +M+++G+ ++ YN L+H
Sbjct: 154 VVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHAC 213
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ G P++A ++ +M + P T+N +++ CK AL + +++ G P +
Sbjct: 214 SKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNI 273
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
VTYN I G + GR+R A + +E+ D A N +TYTT++ R L +
Sbjct: 274 VTYNSFIHGFSREGRMREATRLFREIKDDVTA-NHVTYTTLIDGYCRMNDIDEALRLREV 332
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M+ +G++ Y +++ + GR++EA + +M ++ D ++ NTLIN YCK
Sbjct: 333 MESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIED 392
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+ +A + +M + G + D Y++ LI G CK ++ A+ L M + GF Y+
Sbjct: 393 MVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSW 452
Query: 317 IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
+VD K D + E E + D Y ++ +CK +++ A L S K G
Sbjct: 453 LVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKG 512
Query: 373 V 373
+
Sbjct: 513 L 513
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 176/393 (44%), Gaps = 24/393 (6%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS-YN 70
F + +L+++ + + + SL+ G + + P DV ++
Sbjct: 96 FKTAHQLLDKLAQRELLSSPLVLRSLVGGVSED------------------PEDVSHVFS 137
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
LM + G +++ VF+ + L P ++LN L K R TD ++F+ + K
Sbjct: 138 WLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKL 197
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G V + YN+L+ K+G A +L E+ + G P+ TY T++ + +
Sbjct: 198 GVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEA 257
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
L + M+R G + Y + I F + GR++EAT + + D V + V+Y TLI+
Sbjct: 258 LSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDG 316
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
YC+ ++ A L + ME +GF T+ ++ LC+ G I+ A L M+ + +
Sbjct: 317 YCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPD 376
Query: 311 LEAYNCIVDRLGKDGKIDHAINV----FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLL 366
N +++ K + A+ V ES D ++Y +++H CK L +A + L
Sbjct: 377 NITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELF 436
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
S ++ G + +VDG + + E K+
Sbjct: 437 SMIEKGFSPGYATYSWLVDGFYNQNKQDEITKL 469
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 132/300 (44%), Gaps = 34/300 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS------------- 48
LI YC+ ++ +RM +G++P++VTYNS I G +R +
Sbjct: 244 LISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDV 303
Query: 49 --------------CSLDLLDEMLEM-------GIPPDVWSYNSLMHCLFQLGKPDEANR 87
C ++ +DE L + G P V +YNS++ L + G+ EANR
Sbjct: 304 TANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANR 363
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
+ +M + P T N ++N CK +A+++ + + + G ++ +Y LI G C
Sbjct: 364 LLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFC 423
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K L A+ L + + G +P TY+ ++ + K ++L +++G D
Sbjct: 424 KVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVA 483
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y +I K+ ++ A E M G+ D V + T+ Y + GK+ A L D M
Sbjct: 484 LYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVM 543
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 110/251 (43%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ D + M G SP VVTYNS++ + + + LL EM
Sbjct: 313 LIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKK 372
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD + N+L++ ++ A +V + MI L ++ +++G CK +NA
Sbjct: 373 IEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAK 432
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + GF P TY+ L+ G + +L+E G + Y +++
Sbjct: 433 EELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRI 492
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + +M++KG D + T+ A+ + G++ EA+ + M + +++
Sbjct: 493 CKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNL 552
Query: 242 VSYNTLINLYC 252
Y ++ Y
Sbjct: 553 KLYKSISASYA 563
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 176/377 (46%), Gaps = 6/377 (1%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
+++L M G PD+ +N+ + R + L +L+L M G PDV SY ++
Sbjct: 104 HSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDA 163
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
L + DEA +V++ +I L+P ++ GLC D A + G+ K G
Sbjct: 164 LCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVN 223
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
+ YN LI G C+ GR+ A I + +G P+ +TY ++ C + ++
Sbjct: 224 SLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVE 283
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKE 254
M+R G D + Y ++ F K + A M E+M T G+ D+VSYNT+I +CK
Sbjct: 284 TMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGM-CDVVSYNTVITAFCKA 342
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
+ Y L +EM +G D T ILID + G+ + L+ M K+ + Y
Sbjct: 343 RRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFY 402
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
+VD L K+GK+D A +VF M D +Y+++++ CK R+ A L
Sbjct: 403 TAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQS 462
Query: 371 SGVRILKSAQKAVVDGL 387
G+ + K +V GL
Sbjct: 463 KGLYPDEVTYKLIVGGL 479
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 192/389 (49%), Gaps = 6/389 (1%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
C+ + + + M G PDVV+Y +I + + +++ G+ PD
Sbjct: 130 CRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDY 189
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
+ +L+ L G+ D A + +I G + + +N +++G C+ D A+++
Sbjct: 190 KACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAF 249
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNR 185
+ + G VP+LVTYNIL+ C+ G + A +++ + SG P+ +Y ++K C N
Sbjct: 250 MSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANM 309
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
+ L ++ M+ KG D Y TVI AF K R ++ + E+M G++ D+V++N
Sbjct: 310 VDRAHLMMVERMQTKGMC-DVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFN 368
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
LI+ + +EG LLDEM K D +T ++D LCK G + A M +
Sbjct: 369 ILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVEN 428
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSA 361
G + ++ +YN +++ K ++ A+++F+ M+ K D TY +V L + K++ A
Sbjct: 429 GVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLA 488
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
++ ++ G + + + +V+ ++ S
Sbjct: 489 CRVWDQMMERGFTLNRHLSETLVNAIQSS 517
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 162/337 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++IDA C FD + R+ + G+SPD +L+ G + + +L+ +++
Sbjct: 159 IIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKG 218
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + YN+L+ ++G+ D+A ++ M P T+NI+LN C+ D A
Sbjct: 219 GVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEA 278
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+R+ +++ G P+L +YN L+KG CKA + A ++ E + + ++Y T++
Sbjct: 279 VRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITA 338
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ R+ + G E+ M KG D + +I AF++ G +++M V D
Sbjct: 339 FCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPD 398
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ Y +++ CK GK++ A+ + +M + G D ++ L++G CK + A +
Sbjct: 399 CIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFD 458
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M G + Y IV L + KI A V++ M
Sbjct: 459 EMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQM 495
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 176/395 (44%), Gaps = 8/395 (2%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M ++ I + Y S I+ + L++ ++ L D+M E YN + L + +
Sbjct: 1 MYQSSIGAHRLAYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSR 60
Query: 82 PDEANRVFQ-DMICGDLTPCTATFNIMLNGLCKNRYTDNAL---RMFRGLQKHGFVPELV 137
A+ ++ +I + T++ ++ LC N + + GFVP++
Sbjct: 61 LHLAHHYYRRHVIPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIW 120
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
+N + LC+ RL TA + + G P+ ++YT I+ +++ ++ +
Sbjct: 121 AFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRL 180
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
KG + D ++ GR+ A + + ++ GV+++ + YN LI+ +C+ G++
Sbjct: 181 IDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRV 240
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
+ A + M + G D T+ IL++ C+ G + A +E M + G + +L +YN +
Sbjct: 241 DKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNEL 300
Query: 318 VDRLGKDGKIDHA-INVFESMEVK---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ K +D A + + E M+ K D +Y++++ CKA+R +L G+
Sbjct: 301 LKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGI 360
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
R ++D G KK+ ++ ++
Sbjct: 361 RPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRV 395
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I A+C+ GY + M GI PD+VT+N LI R LLDEM +M
Sbjct: 335 VITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMR 394
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD Y +++ L + GK D A+ VF+DM+ + P ++N +LNG CK +A+
Sbjct: 395 VLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAM 454
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
+F +Q G P+ VTY +++ GL + ++ A + ++ + G N
Sbjct: 455 HLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLN 503
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 101/205 (49%), Gaps = 2/205 (0%)
Query: 2 LIDAYCQFVSFDAGYTIL-NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L+ +C+ D + ++ RM+ G+ DVV+YN++I + +L +EM
Sbjct: 300 LLKGFCKANMVDRAHLMMVERMQTKGMC-DVVSYNTVITAFCKARRTRKGYELFEEMCGK 358
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD+ ++N L+ + G ++ +M + P + +++ LCKN D A
Sbjct: 359 GIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVA 418
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+FR + ++G P++++YN L+ G CK R+ A + E+ G P+ +TY I+
Sbjct: 419 HSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGG 478
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFD 205
R +K L + M +G+T +
Sbjct: 479 LIRGKKISLACRVWDQMMERGFTLN 503
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 198/404 (49%), Gaps = 12/404 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ D + + + M++AG+ P+V T N ++ ++ L + + +EM
Sbjct: 382 ILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK 441
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PD ++ SL+ L ++G+ D+A +V++ M+ D + + ++ + ++
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT---- 176
++++ + P+L N + + KAG R + +E+ P+A +Y+
Sbjct: 502 HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++K F N Y E+ +MK +G D Y VI F K G++ +A +E+M T G
Sbjct: 562 LIKAGFANETY----ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
+ +V+Y ++I+ K +L+ AY+L +E + + E + ++ LIDG K G I A
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNL 352
L LE + + G NL +N ++D L K +I+ A+ F+SM+ + TY +++ L
Sbjct: 678 LILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
CK ++ A K G++ + ++ GL +G EA
Sbjct: 738 CKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEA 781
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 197/429 (45%), Gaps = 45/429 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I Y FD Y++L R R G P V+ YN ++ + + +L + +EM +
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKD 372
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P++ +YN L+ L + GK D A + M L P T NIM++ LCK++ D A
Sbjct: 373 AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEAC 432
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-- 179
MF + P+ +T+ LI GL K GR+ A + +++ DS N+I YT+++K
Sbjct: 433 AMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNF 492
Query: 180 ---------------------------------CCFRNRKYKLGLEILSAMKRKGYTFDG 206
C F+ + + G + +K + + D
Sbjct: 493 FNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDA 552
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I +K G E + M G LD +YN +I+ +CK GK+ AY LL+E
Sbjct: 553 RSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEE 612
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+ +GFE T+ +IDGL K + A + E + N+ Y+ ++D GK G+
Sbjct: 613 MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGR 672
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
ID A + E + K + +T++S++ L KA+ + A L C +S ++ LK
Sbjct: 673 IDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEA----LVCFQS-MKELKCTPNQ 727
Query: 383 VVDGLRHSG 391
V G+ +G
Sbjct: 728 VTYGILING 736
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 182/403 (45%), Gaps = 7/403 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ A C+ +FDA IL M AG P V T ++ G + + L D++ M +
Sbjct: 105 LLVMARCR--NFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKF 162
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P +Y +L+ + D +FQ M P F ++ G K D+A
Sbjct: 163 KFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSA 222
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + ++ ++V YN+ I K G++ A E+ +G P+ +TYT+++
Sbjct: 223 LSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGV 282
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + +E+ +++ + Y T+I + G+ EA +E+ G
Sbjct: 283 LCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPS 342
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++YN ++ K GK++ A + +EM+K + T+ ILID LC+AG + A +
Sbjct: 343 VIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFELRD 401
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M K G N+ N +VDRL K K+D A +FE M+ K D T+ S++ L K
Sbjct: 402 SMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVG 461
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
R+ A K+ L S R +++ + G + + KI
Sbjct: 462 RVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKI 504
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 176/389 (45%), Gaps = 5/389 (1%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
ID++ + D + + + G+ PD VTY S+I + + L ++++ + + +
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR 304
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P ++YN+++ GK DEA + + P +N +L L K D AL+
Sbjct: 305 VPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALK 364
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+F ++K P L TYNILI LC+AG+L TA + + +G PN T ++
Sbjct: 365 VFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLC 423
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+++K + M K T D +C++I K+GR+ +A E+M+ + + +
Sbjct: 424 KSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSI 483
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
Y +LI + G+ E + + +M Q D +D + KAG + R E +
Sbjct: 484 VYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI 543
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRL 358
F + +Y+ ++ L K G + +F SM+ V D+ Y+ ++ CK ++
Sbjct: 544 KARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKV 603
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGL 387
A +LL G +V+DGL
Sbjct: 604 NKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 143/310 (46%), Gaps = 5/310 (1%)
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
SYNSL+ + + D +++ +M P T M+ G K + + +
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
+K F P Y LI + +++ + G+ P +TT+++ + +
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
L +L MK D Y I +F K+G++ A + ++ +G++ D V+Y ++
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
I + CK +L+ A + + +EK Y + +I G AG A LE G
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASK 363
++ AYNCI+ L K GK+D A+ VFE M+ KD+ TY+ ++ LC+A +L +A +
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFE 398
Query: 364 LLLSCLKSGV 373
L S K+G+
Sbjct: 399 LRDSMQKAGL 408
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 137/318 (43%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
+ G + ++ PD +Y+ LI G + + + +L M E G D +YN +
Sbjct: 534 EKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIV 593
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ + GK ++A ++ ++M P T+ +++GL K D A +F +
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+V Y+ LI G K GR+ A IL+EL G PN T+ +++ + + L
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALV 713
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+MK T + Y +I K+ + +A + ++M G++ +SY T+I+
Sbjct: 714 CFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLA 773
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K G + A L D + G D + +I+GL A E + G + +
Sbjct: 774 KAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNK 833
Query: 313 AYNCIVDRLGKDGKIDHA 330
++D L K+ ++ A
Sbjct: 834 TCVVLLDTLHKNDCLEQA 851
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID + D Y + + I +VV Y+SLI G + + + +L+E+++ G
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+++++NSL+ L + + +EA FQ M TP T+ I++NGLCK R + A
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAF 747
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ +QK G P ++Y +I GL KAG + A + +G P++ Y +++
Sbjct: 748 VFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL 807
Query: 182 FRNRKYKLGLEILSAMKRKG 201
+ + +R+G
Sbjct: 808 SNGNRAMDAFSLFEETRRRG 827
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 3/170 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+DA + + M+E +P+ VTY LI G + + + EM + G
Sbjct: 698 LLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG 757
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P SY +++ L + G EA +F P +A +N M+ GL +A
Sbjct: 758 MKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAF 817
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR---WILKELGDSGHA 168
+F ++ G T +L+ L K L A +L+E G + HA
Sbjct: 818 SLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKARHA 867
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 54/114 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ F+ + M++ G+ P ++Y ++I+G + ++ + L D
Sbjct: 732 ILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKAN 791
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
G PD YN+++ L + +A +F++ L T ++L+ L KN
Sbjct: 792 GGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKN 845
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 168/355 (47%), Gaps = 4/355 (1%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
I AYC+ + D +L RM G+ V YN L+ G RN+ + ++++ + M+E GI
Sbjct: 202 IRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGI 261
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
D +Y +L++ + + + A + DM+ P A+ + M++GL K + D A R
Sbjct: 262 VADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFR 321
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ L + G VP L N LI LCK R R A + + + + G PN +TY ++
Sbjct: 322 LACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLC 381
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+ L + M+ KG + Y ++I + + +A + +MV G+
Sbjct: 382 KRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAA 441
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
SY+ LI C++G L +A L EM + G + YT T LI G CK GN+ A + M
Sbjct: 442 SYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKM 501
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 353
N +N +++ + G + A +++ M D++TY S++ LC
Sbjct: 502 IDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLC 556
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 186/413 (45%), Gaps = 42/413 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YCQ +F +LN M E G++P +Y+ LIAG R L+ +++L EM G
Sbjct: 411 LINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNG 470
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ +V+++ +L+ + G DEA R+F MI + P TFN+M+ G C+ A
Sbjct: 471 VSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAF 530
Query: 122 RMFRGLQKHGFVPELVTYNILIK-----------------------------------GL 146
+++ + G P+ TY LI G
Sbjct: 531 QLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGF 590
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK GRL I E+ G + I++T I+ + + + MK KG D
Sbjct: 591 CKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDN 650
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ +I K + +A + ++M+ DG ++V+Y LIN CK G L +A +L +E
Sbjct: 651 VFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEE 710
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M F + +T+ +D L G ++ A+ LH + G +N +N ++ K G
Sbjct: 711 MLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATILE--GCLANTVTFNTLIKGFCKAG 768
Query: 326 KIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
+I AI++ ES D +YS++++ LCK + A +L L G++
Sbjct: 769 QIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLK 821
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 191/410 (46%), Gaps = 38/410 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + C+ D + +RMRE GI V YNSLI G ++ + LL+EM+E
Sbjct: 375 ILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEK 434
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P SY+ L+ L + G A + ++M ++ TF +++G CK+ D A
Sbjct: 435 GLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEA 494
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+F + VP VT+N++I+G C+ G +R A + ++ D G P+ TY +++
Sbjct: 495 ARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISV 554
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
E + ++ + F T++ F K GRL E ++M GV+LD
Sbjct: 555 LCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLD 614
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK------------------------ 276
++S+ ++ K E +L EM+++G + D
Sbjct: 615 LISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWD 674
Query: 277 -----------YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
T+T+LI+ LCK+G + A++ E M F N YNC +D L +G
Sbjct: 675 KMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEG 734
Query: 326 KIDHAINVFESME---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
+++ A + ++ + ++ T+++++ CKA ++ A L+ + +SG
Sbjct: 735 ELEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESG 784
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 181/368 (49%), Gaps = 6/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ F + M G+ P+ VTY LI + ++ +L + D M E G
Sbjct: 341 LIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKG 400
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I V+ YNSL++ Q +A + +M+ L P A+++ ++ GLC+ +A+
Sbjct: 401 IRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAM 460
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ R + ++G + T+ LI G CK G + A + ++ DS PN +T+ +++
Sbjct: 461 ELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGY 520
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF-VKIGRLKEATDYMEQMVTDGVQLD 240
R + ++ M +G T D + Y ++I+ + +G +K A ++++ + + V L+
Sbjct: 521 CRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMK-AKEFVDDLENNCVVLN 579
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
S TL+ +CKEG+L Y + DEM +G + D + T+++ K + + +
Sbjct: 580 SFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFR 639
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 356
M + G + + C++D K+ I A+N ++ M + TY+ ++++LCK+
Sbjct: 640 EMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSG 699
Query: 357 RLPSASKL 364
L SA L
Sbjct: 700 YLSSAQIL 707
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 175/391 (44%), Gaps = 66/391 (16%)
Query: 20 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML--------------------- 58
N M E GI D VTY +L+ G R L +L++ D+ML
Sbjct: 254 NSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKR 313
Query: 59 --------------EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF 104
E+G+ P++++ N+L+ L + + EA R+F+ M L P T+
Sbjct: 314 GHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTY 373
Query: 105 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 164
I+++ LCK D+AL MF +++ G + YN LI G C+ AR +L E+ +
Sbjct: 374 AILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVE 433
Query: 165 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 224
G AP+A +Y+ ++ R +E+ M R G + + + + T+I+ F K G + E
Sbjct: 434 KGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDE 493
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A ++M+ V + V++N +I YC+ G + A+ L D+M +G D YT+ LI
Sbjct: 494 AARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLIS 553
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT 344
LC L L M F +LE NC+ V +SF+
Sbjct: 554 VLC---------LTLGAMKAKEFVDDLEN-NCV---------------------VLNSFS 582
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
+++++ CK RL + GV++
Sbjct: 583 LTTLMYGFCKEGRLTETYHIWDEMRARGVKL 613
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 168/401 (41%), Gaps = 51/401 (12%)
Query: 14 AGYTILNRMREA----------GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP 63
+ Y L R R+A GI+ T + ++ + + + DL DEM++ P
Sbjct: 133 SSYLRLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFP 192
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
D + Y + + ++ D A + M + +N+++ GLC+N A+ +
Sbjct: 193 LDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEV 252
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE---------------------- 161
+ + G V + VTY L+ G C+ L A + +
Sbjct: 253 KNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRK 312
Query: 162 -------------LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
LG+ G PN ++ ++R+++ + M +G +
Sbjct: 313 RGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVT 372
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y +I + K G + +A ++M G+++ + YN+LIN YC+ A LL+EM
Sbjct: 373 YAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMV 432
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
++G +++ LI GLC+ G++ A LH E M + G N+ + ++ KDG +
Sbjct: 433 EKGLAPSAASYSPLIAGLCRKGDLASAMELHRE-MARNGVSGNVYTFTTLISGFCKDGNM 491
Query: 328 DHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKL 364
D A +F+ M V + T++ M+ C+ + A +L
Sbjct: 492 DEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQL 532
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 158/365 (43%), Gaps = 52/365 (14%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIA--------------------- 39
++I+ YC+ + + + ++M + G++PD TY SLI+
Sbjct: 515 VMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENN 574
Query: 40 --------------GATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
G + L+ + + DEM G+ D+ S+ +++ +L ++
Sbjct: 575 CVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKI 634
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+ +F++M + P M++ K AL + + G P +VTY +LI
Sbjct: 635 SVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINH 694
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LCK+G L +A+ + +E+ PN+ TY + N ++L A +G +
Sbjct: 695 LCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDF-LANEGELEKAKVLHATILEGCLAN 753
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+ T+I F K G+++ A D M+ G D +SY+T+IN CK G + A+ L +
Sbjct: 754 TVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWN 813
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD-RLGKD 324
EM +G + D + ILI + NI G FD L Y+ +V+ + D
Sbjct: 814 EMLYKGLKPDIVAYNILI----RWCNIHGE-----------FDKGLGIYSDMVNLKYADD 858
Query: 325 GKIDH 329
++H
Sbjct: 859 TPVNH 863
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 125/278 (44%), Gaps = 8/278 (2%)
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
R +A + R G + T + ++ L K + AR + E+ + Y
Sbjct: 139 RRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVY 198
Query: 175 TTIMK--CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
T ++ C RN GL L+ M+ KG Y ++ + R+ EA + M
Sbjct: 199 TAGIRAYCEIRNLDGARGL--LTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSM 256
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
V G+ D V+Y TL+ +C+ +LE A + D+M F + + ++DGL K G+I
Sbjct: 257 VERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHI 316
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 348
A ++ ++G NL A N ++D+L KD + A +F M + + TY+ +
Sbjct: 317 DKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAIL 376
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+H+LCK + A + + G+R+ ++++G
Sbjct: 377 IHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLING 414
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 146/285 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L +C+ ++ + + + G+ P VV+YN+L+ G R L L M
Sbjct: 147 ILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMHAS 206
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D AN +F +M+ L P TF +++G CKN D A
Sbjct: 207 GVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 266
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + +P+L+TYN LI GLCK G L A ++ E+ G P+ ITYTT++
Sbjct: 267 MEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDG 326
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + E M ++ D Y +I+ + GR +A M +M++ G++ D
Sbjct: 327 CCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKPD 386
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y +IN CK+G + LL EM+ G T+ +L++G
Sbjct: 387 TGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPSVVTYNVLMNG 431
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 142/298 (47%), Gaps = 1/298 (0%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E LE G P ++ +N L H + G A VF + L P ++N ++NG +
Sbjct: 131 EEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D ++ + G P++ TY++LI GLCK ++ A + E+ G PN +T+
Sbjct: 191 GDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTF 250
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + D Y T+I K G L +A D +++M
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSM 310
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG L+ A+ M ++ D +T LI GLC+ G
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 370
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
A + M +G + Y I++ + K G + + + M+ D S + +N+
Sbjct: 371 AEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQ-XDGHAPSVVTYNV 427
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 152/297 (51%), Gaps = 2/297 (0%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L + + + + D + + G+ P V SYN+LM+ +LG D
Sbjct: 135 ECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 194
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E ++ M + P T+++++NGLCK D A +F + G VP VT+ LI
Sbjct: 195 EGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLI 254
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I K++ P+ ITY T++ + +++ M KG
Sbjct: 255 DGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLK 314
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L A ++ ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 315 PDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKM 374
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVD 319
+ EM G + D T+T++I+ +CK G++ KG++L L+ M G ++ YN +++
Sbjct: 375 MREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKL-LKEMQXDGHAPSVVTYNVLMN 430
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 136/266 (51%), Gaps = 4/266 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
FNI+ + CK A +F + K G P +V+YN L+ G + G L + +
Sbjct: 145 FNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMH 204
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
SG P+ TY+ ++ + K E+ M KG +G + T+I K GR+
Sbjct: 205 ASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A + +QM++ + D+++YNTLI CK+G L A+ L+DEM +G + DK T+T LI
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLI 324
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK-IDHAINVFESMEV--- 339
DG CK G++ A H + M + + AY ++ L ++G+ +D + E + V
Sbjct: 325 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLK 384
Query: 340 KDSFTYSSMVHNLCKAKRLPSASKLL 365
D+ TY+ +++ +CK + SKLL
Sbjct: 385 PDTGTYTMIINEVCKKGDVGKGSKLL 410
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 127/272 (46%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y + + G+ L +NIL CK G +R A+ + + G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWG 172
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ ++Y T+M R G ++ SAM G D + Y +I K ++ A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXAN 232
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ + V++ TLI+ +CK G+++ A + +M Q D T+ LI GL
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++ A ++ M+ G + Y ++D K+G +D A + M + D
Sbjct: 293 CKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 352
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K++ L G++
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMMREMLSVGLK 384
>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
Length = 1302
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 187/427 (43%), Gaps = 75/427 (17%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M+ G++P +T N ++ A L+ + ++ DEM G+ PD SY ++ F+ GK
Sbjct: 774 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 833
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
EA+R MI P AT ++L LC+N + A+ FR + GF P L+ +
Sbjct: 834 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 893
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM----KCCFRNRKYKLGLEIL--- 194
LI GLCK G ++ A +L+E+ +G PN T+T ++ K + + ++L L+++
Sbjct: 894 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 953
Query: 195 -----------------------------SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
S MK +G + Y T+I K G A
Sbjct: 954 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 1013
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ M M +G +I +YN I+ CK+ + AY LL++ G E D T+TILI
Sbjct: 1014 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 1073
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNL---------------------------------- 311
CK +I A MNK GF++++
Sbjct: 1074 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPT 1133
Query: 312 -EAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLL 366
E Y ++ K+G ID A+ F +M+ V DSFTY S++ LCK + A KL
Sbjct: 1134 KETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 1193
Query: 367 SCLKSGV 373
+ + G+
Sbjct: 1194 AMIDRGL 1200
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 159/331 (48%), Gaps = 5/331 (1%)
Query: 47 LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 106
L+ ++ ++ +M G+ P + N ++ +LG + A VF +M + P ++++ +
Sbjct: 764 LNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKL 823
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
M+ G ++ A R G+ + GF+P+ T +++ LC+ G + A W +++ D G
Sbjct: 824 MVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLG 883
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
PN I +T+++ + K E+L M R G+ + + + +I K G ++A
Sbjct: 884 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAF 943
Query: 227 DYMEQMV-TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
++V +D + ++ +Y ++I YCKE KL A +L M++QG + T+T LI+G
Sbjct: 944 RLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLING 1003
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV----FESMEVKD 341
CKAG+ A + M GF N+ YN +D L K + A + F D
Sbjct: 1004 HCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEAD 1063
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
TY+ ++ CK + A K+G
Sbjct: 1064 GVTYTILIQEQCKQNDINQALAFFCRMNKTG 1094
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 140/276 (50%), Gaps = 5/276 (1%)
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
G+L ML + + A+ M +Q G P +T N +++ + G +
Sbjct: 742 GNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEY 801
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
A + E+ G P++ +Y ++ CFR+ K + L+ M ++G+ D ++
Sbjct: 802 AENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILT 861
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
A + G + A Y +M+ G + +++++ +LI+ CK+G ++ A+ +L+EM + G++
Sbjct: 862 ALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKP 921
Query: 275 DKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
+ YTHT LIDGLCK G + A RL L+ + + N+ Y ++ K+ K++ A +
Sbjct: 922 NVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEML 981
Query: 334 FESMEVKDSF----TYSSMVHNLCKAKRLPSASKLL 365
F M+ + F TY+++++ CKA A +L+
Sbjct: 982 FSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELM 1017
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 127/269 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I YC+ + + +RM+E G+ P+V TY +LI G + + +L++ M + G
Sbjct: 965 MIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEG 1024
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P++++YN+ + L + + EA + L T+ I++ CK + AL
Sbjct: 1025 FMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQAL 1084
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F + K GF ++ NILI C+ +++ + + + + G P TYT+++ C
Sbjct: 1085 AFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCY 1144
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ L L+ MKR G D F Y ++I+ K + EA E M+ G+
Sbjct: 1145 CKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPE 1204
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
V+ TL YCK A +LL+ ++K+
Sbjct: 1205 VTRVTLAYEYCKRNDSANAMILLEPLDKK 1233
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 89/188 (47%), Gaps = 4/188 (2%)
Query: 216 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
F +IGRL EA + M G+ ++ N ++ + + G +E A + DEM +G D
Sbjct: 758 FSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPD 817
Query: 276 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
++ +++ G + G I+ A L M + GF + I+ L ++G ++ AI F
Sbjct: 818 SSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFR 877
Query: 336 SM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
M + ++S++ LCK + A ++L +++G + A++DGL G
Sbjct: 878 KMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRG 937
Query: 392 CRREAKKI 399
+A ++
Sbjct: 938 WTEKAFRL 945
>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 643
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 179/390 (45%), Gaps = 9/390 (2%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + MR+ G+ P+V TYN L+ +N+ + + +LDEM G PPD +Y +++ L
Sbjct: 146 VYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLC 205
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+L + DEA V M P A++N ++ LC+ + + G P ++
Sbjct: 206 KLDRLDEATEVLAAM-----PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVI 260
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TY ++ CKAG LR A IL + +G PN +T+T +++ F + + L++ M
Sbjct: 261 TYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWM 320
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+G+ Y +I +G LK A+ + M G ++ +Y+TLI+ + K G L
Sbjct: 321 VAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDL 380
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A + ++M + G + + +T ++D CK A+ ++ M N +N +
Sbjct: 381 GGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTL 440
Query: 318 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ L ++ A+ VF M V + TY+ ++H L + A ++ G+
Sbjct: 441 IRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGI 500
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ VV GL + REA K+
Sbjct: 501 ELSLVTYNTVVSGLCQTRMSREAMVFVGKM 530
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 179/406 (44%), Gaps = 48/406 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ A CQ A +L+ M G PD VTY ++++ + C LD LDE E+
Sbjct: 164 LLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVS-------VLCKLDRLDEATEV 216
Query: 61 --GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--------------------CGDL- 97
+PP SYN+++ L + + E V DM+ G+L
Sbjct: 217 LAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELR 276
Query: 98 --------------TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
TP TF ++ GL + +AL M+R + G+ P V+YNILI
Sbjct: 277 MACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILI 336
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
+GLC G L+ A IL + G PN TY+T++ + + I + M R G
Sbjct: 337 RGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCK 396
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
+ Y ++ F K +A +++M+ + + V++NTLI C ++ A +
Sbjct: 397 PNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGV 456
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
EM + G + T+ LI GL + GN A + M G + +L YN +V L +
Sbjct: 457 FHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQ 516
Query: 324 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
A+ M V+ ++FT+S+++H CK + A+ +L
Sbjct: 517 TRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWML 562
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 184/404 (45%), Gaps = 5/404 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ A C+ +++++ M G+ P+V+TY +++ + L + +L M+ G
Sbjct: 230 IVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITG 289
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V ++ +L+ LF G+ +A +++ M+ P T ++NI++ GLC A
Sbjct: 290 CTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGAS 349
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ +++HG P + TY+ LI G KAG L A I ++ SG PN + YT ++
Sbjct: 350 SILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVF 409
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + ++ M + + + T+I + R+ A +M G +
Sbjct: 410 CKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNG 469
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN LI+ +EG A ++ EM+ G E T+ ++ GLC+ + A + +
Sbjct: 470 RTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGK 529
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M G N ++ I+ K+G++ A + +M V ++ Y+ ++ LC +
Sbjct: 530 MIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDK 589
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGL-RHSGCRREAKKIQ 400
L A LL L G+ +V G+ R+ GC + IQ
Sbjct: 590 LVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCIEPSDFIQ 633
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 134/286 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C +ILN M + G P+V TY++LI G ++ L ++ + ++M
Sbjct: 334 ILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRS 393
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V Y +++ + ++A + M+ + P T TFN ++ LC R A
Sbjct: 394 GCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRA 453
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F +++HG VP TYN LI GL + G A ++ E+ G + +TY T++
Sbjct: 454 LGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSG 513
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ R + + + M +G + F + +I A+ K G ++ A + M +
Sbjct: 514 LCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRN 573
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
I+ Y L+ C + KL A L +M +G + T +L+ G+
Sbjct: 574 ILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 619
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 127/267 (47%), Gaps = 9/267 (3%)
Query: 112 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 171
C + ++ ++K G P + TYN+L++ LC+ R+ AR +L E+ G P+
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194
Query: 172 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 231
+TY TI+ + + E+L+AM +++ ++ A + R++E +
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNA-----IVLALCREFRMQEVFSVVSD 249
Query: 232 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
MV G+Q ++++Y T+++ +CK G+L A +L M G + T T L+ GL G
Sbjct: 250 MVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGR 309
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSS 347
+ A +M G+ + +YN ++ L G + A ++ SME F TYS+
Sbjct: 310 VHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYST 369
Query: 348 MVHNLCKAKRLPSASKLLLSCLKSGVR 374
++ KA L A + +SG +
Sbjct: 370 LIDGFSKAGDLGGAISIWNDMSRSGCK 396
>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 191/403 (47%), Gaps = 4/403 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ G+++L M + G+ P V+T +LI G ++ ++ L+D M +M
Sbjct: 117 IVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKM 176
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P DV++Y L++ L + G A + M + P ++ +++GLCK+ A
Sbjct: 177 RYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEA 236
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + G P LVTY LI+GLC GR + +L E+ G + T ++
Sbjct: 237 LNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDA 296
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K ++ M G D F Y ++I + ++ EA MV+ G D
Sbjct: 297 FCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPD 356
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV + +LI+ +CK+ + LL+EM K GF D T T LI G C+AG A+
Sbjct: 357 IVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFL 416
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M+K G NL+ I+D L K + A+++ E+ME + YS ++ +C A
Sbjct: 417 NMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAG 476
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+L +A +L S G++I ++ GL G +A+ +
Sbjct: 477 KLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDL 519
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 148/323 (45%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C F + ++L+ M + G+ D+ T N L+ + + + ++ M+ G
Sbjct: 258 LIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTG 317
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV++YNSL+H K +EA RVF M+ P F +++G CK++ + +
Sbjct: 318 EGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVM 377
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + K GFVP++VT+ LI G C+AGR A+ + + G PN T I+
Sbjct: 378 HLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGL 437
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + AM++ + Y ++ G+L A + + G+Q+++
Sbjct: 438 CKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINV 497
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y +I CK+G L+ A LL ME+ G D T+ + + GL I + +L
Sbjct: 498 YTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTI 557
Query: 302 MNKIGFDSNLEAYNCIVDRLGKD 324
M GF + ++ L +
Sbjct: 558 MRDKGFSVDAATTEITINYLSTN 580
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 169/369 (45%), Gaps = 4/369 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ A L +M E P+VV Y++++ G ++ L+S +L+L EM
Sbjct: 187 VLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGK 246
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P++ +Y L+ L G+ E + +MI + T NI+++ CK A
Sbjct: 247 GVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQA 306
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + G P++ TYN LI C ++ A + + G P+ + +T+++
Sbjct: 307 KSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHG 366
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+++ + +L M + G+ D + T+I F + GR A + M G +
Sbjct: 367 WCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPN 426
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ + +++ CK L A L + MEK + + ++IL+DG+C AG + A
Sbjct: 427 LQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFS 486
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ G N+ Y ++ L K G +D A ++ +ME + D+ TY+ V L K
Sbjct: 487 SLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKK 546
Query: 357 RLPSASKLL 365
+ + K L
Sbjct: 547 EIARSIKYL 555
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 152/355 (42%), Gaps = 5/355 (1%)
Query: 50 SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG-DLTPCTATFNIML 108
+LDL M M P V + L+ + +L A + + + + T T NI++
Sbjct: 60 ALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLGIEADTITLNIVI 119
Query: 109 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
N LC+ + + + K G P ++T LI GLC G + A ++ + +
Sbjct: 120 NCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYP 179
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
+ TY ++ + +E L M+ + + + Y T++ K G + EA +
Sbjct: 180 LDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNL 239
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+M GV+ ++V+Y LI C G+ + LLDEM K G D T IL+D CK
Sbjct: 240 CSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCK 299
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 344
G + A+ + +M G ++ YN ++ K++ A+ VF M + D
Sbjct: 300 EGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVV 359
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
++S++H CK K + LL K G ++ G +G AK++
Sbjct: 360 FTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKEL 414
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 135/290 (46%), Gaps = 9/290 (3%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL-QKHGFVPELVTYNI 141
DEA +FQ M P F ++L + + ++ A+ + + + G + +T NI
Sbjct: 58 DEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLGIEADTITLNI 117
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK--CCFRNRKYKLGLEILSAMKR 199
+I LC+ + +L + G P +T T ++ C N +GL + M++
Sbjct: 118 VINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGL--VDHMEK 175
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
Y D + Y +I K G A +++ +M + ++V Y+T+++ CK+G +
Sbjct: 176 MRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSE 235
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A L EM +G + T+ LI GLC G K L+ M K+G +L+ N +VD
Sbjct: 236 ALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVD 295
Query: 320 RLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 365
K+GK+ A +V M E D FTY+S++H C ++ A ++
Sbjct: 296 AFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVF 345
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 194/411 (47%), Gaps = 44/411 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++DA F I N M+ GI +V TYN L+ +N + + LL EM G
Sbjct: 149 VLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKG 208
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD SY +++ + +LGK +EA + M P +N ++NG C+ +
Sbjct: 209 CIPDAVSYTTVVSSMCRLGKVEEAREL--SMRIKSFVP---VYNALINGFCREHKMEEVF 263
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + G P+++TY+ +I L + G + A +L ++ G +PN T+T++MK
Sbjct: 264 ELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMK-- 321
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
GY F G GRL EA D +M+ +G + +
Sbjct: 322 -------------------GY-FMG-------------GRLCEALDLWNRMIQEGSEPNT 348
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTLI+ C GK+ A + +ME+ G ++ T++ LIDG KAG++ GA
Sbjct: 349 VAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNK 408
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G N+ Y C+VD L ++ +HA+++ E+M ++ T+++ + LC + +
Sbjct: 409 MITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGK 468
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
A K+L + G + V+DGL ++ REA +I +I +I
Sbjct: 469 TEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEI 519
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 175/378 (46%), Gaps = 40/378 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ + + + +L +M G SP+V T+ SL+ G L +LDL + M++ G
Sbjct: 284 VINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEG 343
Query: 62 IPPDVWSYNSLMHCLFQLGK-----------------PDE------------------AN 86
P+ +YN+L+H L GK P+E A+
Sbjct: 344 SEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGAS 403
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
++ MI P + M++ LC+N ++AL + + P +T+N IKGL
Sbjct: 404 EIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGL 463
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C +G+ A +L ++ G APN TY ++ F ++ + L+I+ ++ +
Sbjct: 464 CCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNL 523
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T+++ F G K A +++ G + D ++YNT+I YCK+G+++ A L+D
Sbjct: 524 VTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDR 583
Query: 267 MEKQG-FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV----DRL 321
+ K+G D +T+T L+ G+C + A +HL+ M G N +N +V +L
Sbjct: 584 LTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKL 643
Query: 322 GKDGKIDHAINVFESMEV 339
G G I N+ + +V
Sbjct: 644 GHLGPIHIVDNILANGKV 661
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 183/394 (46%), Gaps = 11/394 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C+ + + + N M GI PDV+TY+++I + + +L +L +M G
Sbjct: 249 LINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRG 308
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V ++ SLM F G+ EA ++ MI P T +N +++GLC A+
Sbjct: 309 CSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAV 368
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + ++++G P TY+ LI G KAG L A I ++ +G PN + YT ++
Sbjct: 369 SVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVL 428
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
RN + L ++ M + + T I G+ + A + QM G ++
Sbjct: 429 CRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNV 488
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN +++ + A ++ E+E+ + + T+ ++ G C AG KGA L+
Sbjct: 489 TTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGA---LQI 545
Query: 302 MNKI---GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-----DSFTYSSMVHNLC 353
K+ G + YN ++ K G++ AI + + + K D FTY+S++ +C
Sbjct: 546 AGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVC 605
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ A L + G+ ++ A+V GL
Sbjct: 606 NWIGVDEAVVHLDKMINEGICPNRATWNALVRGL 639
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 139/335 (41%), Gaps = 34/335 (10%)
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
T+ M+ L R D + + ++ G + I+I +AG A +
Sbjct: 75 TYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRI 134
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
G+ G P+ Y ++ K+++ I + MKR G + + Y ++ A K R+
Sbjct: 135 GEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRV 194
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTL------------------------------INLYC 252
A + +M G D VSY T+ IN +C
Sbjct: 195 DAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVYNALINGFC 254
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
+E K+E + L +EM +G + D T++ +I+ L + GN++ A L M G N+
Sbjct: 255 REHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVH 314
Query: 313 AYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSC 368
+ ++ G++ A++++ M ++ Y++++H LC ++ A +
Sbjct: 315 TFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKM 374
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++GV ++ ++DG +G A +I +K+
Sbjct: 375 ERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKM 409
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 77/167 (46%), Gaps = 4/167 (2%)
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y T+I E ++ LL M+ +G C++ I+I+ +AG + A
Sbjct: 74 LTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYR 133
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
+ + G +++ YN ++D L + K ++ +M+ + +TY+ ++ LCK R
Sbjct: 134 IGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDR 193
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ +A KLL G + VV + G EA+++ +I+
Sbjct: 194 VDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIK 240
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 183/377 (48%), Gaps = 5/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMRE-AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
+LI YC+ D +L M+E A + PD Y LI G R + ++ LLDEML
Sbjct: 301 LLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLR 360
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+G+ +++ NSL++ + G+ EA V M+ +L P + ++N +L+G C+ +T
Sbjct: 361 LGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 420
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + + + G P ++TYN L+KGLC+ G A I + G AP+ + Y+T++
Sbjct: 421 AFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLD 480
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
F+ ++ + + +G+T + T+I+ K+G++ EA + ++M G
Sbjct: 481 GLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP 540
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D ++Y TLI+ YCK + A+ + ME++ + LI GL K+ + L
Sbjct: 541 DGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLL 600
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
M G N+ Y ++D K+G +D A + + M + S+MV L +
Sbjct: 601 TEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRL 660
Query: 356 KRLPSASKLLLSCLKSG 372
R+ A+ L+ + G
Sbjct: 661 GRIDEANLLMQKMVDHG 677
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 194/407 (47%), Gaps = 13/407 (3%)
Query: 7 CQFVSFDAGYTILNRM----REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
C+F D G I + + RE SP V ++ ++ L +L + D M + G
Sbjct: 132 CKFK--DRGNVIWDELVGVYREFAFSPTV--FDMILKVYVEKGLTKNALYVFDNMGKCGR 187
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P + S NSL++ L + G+ A+ V+Q MI + P +IM+N CK+ D A
Sbjct: 188 IPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAG 247
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ ++ G P +VTY+ LI G G + A+ +LK + + G + N +TYT ++K
Sbjct: 248 FVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYC 307
Query: 183 RNRKYKLGLEILSAMKRKGYTF-DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K ++L M+ + D Y +I + + G++ +A +++M+ G++ ++
Sbjct: 308 KQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNL 367
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
N+LIN YCK G++ A ++ M + D Y++ L+DG C+ G+ A +
Sbjct: 368 FICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDK 427
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M + G + + YN ++ L + G D A+ ++ M + D YS+++ L K +
Sbjct: 428 MLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMEN 487
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
AS L L G + ++ GL G EA++I K++
Sbjct: 488 FEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 534
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 193/415 (46%), Gaps = 18/415 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C+ I ++M++ G SPD +TY +LI G + S + + + M
Sbjct: 513 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREP 572
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P + YNSL+ LF+ + E + +M LTP T+ +++G CK D A
Sbjct: 573 ISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 632
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + ++G ++ + ++ GL + GR+ A +++++ D G P+ +C
Sbjct: 633 SSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH-------ECF 685
Query: 182 FRNR-KYKLGLEILSAMKRKGYTF---DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
++ +Y +I ++ TF + Y IA K G++ +A + + G
Sbjct: 686 LKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGF 745
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
D +Y TLI+ Y G ++ A+ L DEM ++G + T+ LI+GLCK+ N+ A+
Sbjct: 746 VPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQR 805
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 353
+++ G N+ YN ++D K G +D A + + M + TYS++++ LC
Sbjct: 806 LFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLC 865
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
K + + KLL +K+GV +V G SG E +KI M I
Sbjct: 866 KHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSG---EMQKIHKLYDMMHI 917
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 190/443 (42%), Gaps = 40/443 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++A+C+ D + +M G+ P++VTY+SLI G + + +L M E
Sbjct: 231 IMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEK 290
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDN 119
G+ +V +Y L+ + K DEA +V + M L P + ++++G C+ D+
Sbjct: 291 GVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDD 350
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD--------------- 164
A+R+ + + G L N LI G CK G + A ++ + D
Sbjct: 351 AVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLD 410
Query: 165 ----SGHA----------------PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
GH P +TY T++K R + L+I M ++G
Sbjct: 411 GYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAP 470
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D GY T++ K+ + A+ + ++ G +++NT+I+ CK GK+ A +
Sbjct: 471 DEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIF 530
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
D+M+ G D T+ LIDG CKA N+ A M + ++E YN ++ L K
Sbjct: 531 DKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKS 590
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
++ ++ M ++ + TY +++ CK L A ++G+
Sbjct: 591 RRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIIC 650
Query: 381 KAVVDGLRHSGCRREAKKIQSKI 403
+V GL G EA + K+
Sbjct: 651 STMVSGLYRLGRIDEANLLMQKM 673
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 186/402 (46%), Gaps = 15/402 (3%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + M + G P + + NSL+ +N + + +M+ +GI PDV+ + +++
Sbjct: 178 VFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFC 237
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ GK DEA + M + P T++ ++NG + A + + + + G +V
Sbjct: 238 KDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVV 297
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGLEILSA 196
TY +LIKG CK ++ A +L+ + + P+ Y ++ R K + +L
Sbjct: 298 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M R G + F ++I + K G + EA + +MV ++ D SYNTL++ YC+EG
Sbjct: 358 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 417
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
A+ L D+M ++G E T+ L+ GLC+ G A M K G + Y+
Sbjct: 418 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYST 477
Query: 317 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL-----LS 367
++D L K + A +++ + K T+++M+ LCK ++ A ++ L
Sbjct: 478 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 537
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
C G+ + ++DG + +A K++ + IS
Sbjct: 538 CSPDGI-----TYRTLIDGYCKASNVGQAFKVKGAMEREPIS 574
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 199/439 (45%), Gaps = 43/439 (9%)
Query: 8 QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 67
F + D + NRM P V +N L+ + S L L +M GIPP+++
Sbjct: 38 HFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIY 97
Query: 68 SYNSLMH--CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 125
+ + L++ C GK EA +F MI P T+ ++NGLCK T A+R+
Sbjct: 98 TLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLG 157
Query: 126 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 185
+ + P + YN +I LCK ++ A + E+ G +P+ TY +++
Sbjct: 158 SMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLC 217
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT-DGVQLDIVSY 244
++K +L+ M D + TV+ A K G++ EA D +++M+ G +++SY
Sbjct: 218 EWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISY 277
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA--------- 295
NTLIN YCK +++ A L EM +Q D T++ LI GLC ++ A
Sbjct: 278 NTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVA 337
Query: 296 ----------RLHLEYMNK----------------IGFDSNLEAYNCIVDRLGKDGKIDH 329
R+ L+Y+ K D +++ N +D + + G+++
Sbjct: 338 CSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEA 397
Query: 330 AINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 385
A ++F ++ K D +TYS M++ LC+ L ASKL ++G + +
Sbjct: 398 ARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITR 457
Query: 386 G-LRHSGCRREAKKIQSKI 403
G LR++ R + +Q +
Sbjct: 458 GFLRNNETSRAIQLLQEMV 476
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 1/325 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID+ C+ + + + M GISPD+ TYNSLI LL+EM++
Sbjct: 174 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 233
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNA 120
I PDV S+N+++ L + GK EA+ V MI G P ++N ++NG CK + D A
Sbjct: 234 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKA 293
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +F + + +P+ VTY+ LI GLC RL+ A + E+ PN +TY ++
Sbjct: 294 MYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDY 353
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+NR + +L A++ D I + G L+ A D + + G+Q D
Sbjct: 354 LCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 413
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +Y+ +IN C+ G L+ A L EM++ G + + + G + A L+
Sbjct: 414 VWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQ 473
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDG 325
M GF ++ V L DG
Sbjct: 474 EMVARGFSADASTMTLFVKMLSDDG 498
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 190/406 (46%), Gaps = 7/406 (1%)
Query: 1 MLIDAYCQFVSFDAGYTI--LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
+LI+++C G + ++M G PDVVTY +LI G + S ++ LL M+
Sbjct: 101 ILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMV 160
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
+ P+V++YN+++ L + + EA +F +M+ ++P T+N +++ LC
Sbjct: 161 QKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWK 220
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL-KELGDSGHAPNAITYTTI 177
+ + + +P++V++N ++ LCK G++ A ++ K + G PN I+Y T+
Sbjct: 221 HVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTL 280
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + ++ + + M R+ D Y T+I + RL++A +MV
Sbjct: 281 INGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQ 340
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
++V+Y L++ CK L A LL +E + D + I IDG+C+AG ++ AR
Sbjct: 341 IPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARD 400
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 353
++ G ++ Y+ +++ L + G +D A +F M+ + Y+++
Sbjct: 401 LFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFL 460
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ A +LL + G S V L G + K+I
Sbjct: 461 RNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQI 506
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 130/270 (48%), Gaps = 1/270 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++DA C+ + ++++M + G P+V++YN+LI G + + ++ L EM
Sbjct: 244 VVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQ 303
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD +Y++L+H L + + +A +F +M+ P T+ I+L+ LCKNRY A
Sbjct: 304 ELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEA 363
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + ++ P++ NI I G+C+AG L AR + L G P+ TY+ ++
Sbjct: 364 MALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMING 423
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R ++ M G T +G Y T+ F++ A +++MV G D
Sbjct: 424 LCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSAD 483
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
+ + + +G ++ +L + KQ
Sbjct: 484 ASTMTLFVKMLSDDGLDQSLKQILRDFCKQ 513
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 6/165 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ +L + + + PD+ N I G R L + DL +
Sbjct: 349 ILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK 408
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT---ATFNIMLNGLCKNRYT 117
G+ PDVW+Y+ +++ L + G DEA+++F++M D CT +N + G +N T
Sbjct: 409 GLQPDVWTYSIMINGLCRRGLLDEASKLFREM---DENGCTLNGCIYNTITRGFLRNNET 465
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
A+++ + + GF + T + +K L G ++ + IL++
Sbjct: 466 SRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRDF 510
>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 418
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 149/271 (54%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV++N+L+ G R L L + M
Sbjct: 141 ILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHAS 200
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K +EAN +F +M+ L P TF +++G CKN D+A
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSA 260
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++ + F+P+L+TYN LI GLCK G L+ A+ +L E+ G P+ ITYTT++
Sbjct: 261 METYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDG 320
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ E+ M ++ D Y +I+ + GR +A + +M++ G++ D
Sbjct: 321 NCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPD 380
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+Y +IN +CK+ ++ A LL EM++QG
Sbjct: 381 NGTYTMIINEFCKKEDVKTAAKLLKEMQRQG 411
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 141/283 (49%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
E+LE G P ++ +N LMH + G+ A VF + L P +FN ++NG +
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLG 185
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D ++ + G P++ TY++LI GLCK ++ A + E+ D G PN +T+T
Sbjct: 186 DLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFT 245
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T++ +N K +E M + + D Y T+I K G LK+A D +++M
Sbjct: 246 TLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMK 305
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G++ D ++Y TLI+ CKEG L++A+ L + M K+ D +T LI GLC+ G A
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDA 365
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
L M +G + Y I++ K + A + + M+
Sbjct: 366 EKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQ 408
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 145/295 (49%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ + + + + D + + G+ P V S+N+
Sbjct: 117 FKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNT 176
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG D+ ++ M + P T+++++NGLCK + A +F + G
Sbjct: 177 LMNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKG 236
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP VT+ LI G CK G++ +A K++ P+ ITY T++ + K
Sbjct: 237 LVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQ 296
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
++L M+ KG D Y T+I K G L A + E MV + ++LD V+Y LI+
Sbjct: 297 DLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGL 356
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
C+EG+ A +L EM G + D T+T++I+ CK ++K A L+ M + G
Sbjct: 357 CQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQG 411
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 162/344 (47%), Gaps = 10/344 (2%)
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 124
D++ ++ L++ + G +A F+ L T +L L K +Y +
Sbjct: 65 DIYVFSGLINAYLESGFVRDAIECFRLTREHKLRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 125 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
+ + + G+ L +NIL+ CK G + A+ + + G P+ +++ T+M R
Sbjct: 125 KEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRL 184
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
G ++ +AM G D + Y +I K ++ EA D +M+ G+ + V++
Sbjct: 185 GDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTF 244
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
TLI+ +CK GK+++A +M Q F D T+ LI GLCK G++K A+ L+ M
Sbjct: 245 TTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRM 304
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMVHNLCKAKRLP 359
G + Y ++D K+G +D A + E+M VK+S Y++++ LC+ R
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLDSAFELRETM-VKESIRLDDVAYTALISGLCQEGRAT 363
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A K+L L G++ +++ C++E K +K+
Sbjct: 364 DAEKMLREMLSVGLKPDNGTYTMIINEF----CKKEDVKTAAKL 403
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ + + N M + G+ P+ VT+ +LI G +N + +++ +ML
Sbjct: 211 VLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQ 270
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PD+ +YN+L++ L + G +A + +M L P T+ +++G CK D+A
Sbjct: 271 CFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSA 330
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K + V Y LI GLC+ GR A +L+E+ G P+ TYT I+
Sbjct: 331 FELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINE 390
Query: 181 CFRNRKYKLGLEILSAMKRKGY 202
+ K ++L M+R+G+
Sbjct: 391 FCKKEDVKTAAKLLKEMQRQGH 412
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 86/172 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ D+ +M PD++TYN+LI G + L + DLLDEM G
Sbjct: 247 LIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y +L+ + G D A + + M+ + + +++GLC+ +A
Sbjct: 307 LKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAE 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+M R + G P+ TY ++I CK ++TA +LKE+ GH P +T
Sbjct: 367 KMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQGHVPCVVT 418
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 182/377 (48%), Gaps = 6/377 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C+F A + M + P VVTY SL+ G ++ +L L EM G
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P ++++ +L+ LF+ G +A ++F +M ++ P T+N+M+ G C+ A
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAF 562
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G VP+ +Y LI GLC G+ A+ + L N I YT ++
Sbjct: 563 EFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGF 622
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R K + L + M ++G D Y +I +K K +++M G++ D
Sbjct: 623 CREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDD 682
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V Y ++I+ K G + A+ + D M +G ++ T+T +I+GLCKAG + A +
Sbjct: 683 VIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSK 742
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKID--HAINVFESM---EVKDSFTYSSMVHNLCKAK 356
M + N Y C +D L K G++D A+ + ++ + ++ TY+ ++ C+
Sbjct: 743 MQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQG 801
Query: 357 RLPSASKLLLSCLKSGV 373
R+ AS+L+ + GV
Sbjct: 802 RIEEASELITRMIGDGV 818
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 178/397 (44%), Gaps = 8/397 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I + C+ ++ M G ++V YN LI G + + ++ + ++
Sbjct: 233 VIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKD 292
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +Y +L++ L ++ + + + +M+C +P A + ++ GL K + AL
Sbjct: 293 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEAL 352
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P L YN LI LCK + A + +G G PN +TY+ ++
Sbjct: 353 NLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF 412
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R K L L M G + Y ++I K G + A +M +M+ ++ +
Sbjct: 413 CRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTV 472
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y +L+ YC +GK+ A L EM +G YT T L+ GL +AG I+ A
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNE 532
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M + N YN +++ ++G + A + M V D+++Y ++H LC +
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ 592
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
S +K+ + L G L + GL H CR
Sbjct: 593 -ASEAKVFVDGLHKGNCEL---NEICYTGLLHGFCRE 625
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 164/336 (48%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ C+ F+ G +++ M SP +SL+ G + + +L+L+ +++ G
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+++ YN+L+ L + K EA +F M L P T++I+++ C+ D AL
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ G + YN LI G CK G + A + E+ + P +TYT++M
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGY 482
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K L + M KG + + T+++ + G +++A +M V+ +
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN +I YC+EG + A+ L EM ++G D Y++ LI GLC G A++ ++
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
++K + N Y ++ ++GK++ A++V + M
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEM 638
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 184/401 (45%), Gaps = 6/401 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ +F F + N M GI PDV Y +I LS + +++ M G
Sbjct: 198 LLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATG 257
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
++ YN L+ L + K EA + +D+ DL P T+ ++ GLCK + + L
Sbjct: 258 CDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGL 317
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + F P + L++GL K G++ A ++K + D G +PN Y ++
Sbjct: 318 EMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSL 377
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ RK+ + M + G + Y +I F + G+L A ++ +MV G++L +
Sbjct: 378 CKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSV 437
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLE 300
YN+LIN +CK G + AA + EM + E T+T L+ G C G I K RL+ E
Sbjct: 438 YPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVK-DSFTYSSMVHNLCKAK 356
K G ++ + ++ L + G I A+ +F M VK + TY+ M+ C+
Sbjct: 498 MTGK-GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEG 556
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
+ A + L + G+ + + ++ GL +G EAK
Sbjct: 557 DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 160/340 (47%), Gaps = 4/340 (1%)
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
P+V + ++L+H L + A +F DM+ + P + ++ LC+ + A M
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
++ G +V YN+LI GLCK ++ A I K+L P+ +TY T++ +
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
+++++GLE++ M ++ +++ K G+++EA + ++++V GV ++
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
YN LI+ CK K A LL D M K G + T++ILID C+ G + A L M
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLP 359
G ++ YN +++ K G I A M K TY+S++ C ++
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
A +L G+ ++ GL +G R+A K+
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 149/347 (42%), Gaps = 41/347 (11%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ N M E + P+ VTYN +I G +S + + L EM E GI PD +SY L+H L
Sbjct: 529 LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
G+ EA + G+ + +L+G C+ + AL + + + + G +LV
Sbjct: 589 LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
Y +LI G K + +LKE+ D G P+ + YT+++ + +K I M
Sbjct: 649 CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM---------VTDGVQLDIVS----- 243
+G + Y VI K G + EA +M VT G LDI++
Sbjct: 709 INEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVD 768
Query: 244 ---------------------YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
YN LI +C++G++E A L+ M G D T+T +
Sbjct: 769 MQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTM 828
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN------CIVDRLGK 323
I+ LC+ ++K A M + G + AYN C+ +GK
Sbjct: 829 INELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGK 875
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 130/278 (46%), Gaps = 14/278 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ +C+ + ++ M + G+ D+V Y LI G+ ++ LL EM + G
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG 677
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD Y S++ + G EA ++ MI P T+ ++NGLCK + + A
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 122 RMFRGLQKHGFVPELVTY----NILIKG---LCKAGRLRTARWILKELGDSGHAPNAITY 174
+ +Q VP VTY +IL KG + KA L A ILK G N TY
Sbjct: 738 VLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNA--ILK-----GLLANTATY 790
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
+++ R + + E+++ M G + D Y T+I + +K+A + M
Sbjct: 791 NMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTE 850
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
G++ D V+YNTLI+ C G++ A L +EM +QG
Sbjct: 851 KGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 130/283 (45%), Gaps = 5/283 (1%)
Query: 88 VFQDMICG-DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
VF+ MI L P T + +L+GL K R+ A+ +F + G P++ Y +I+ L
Sbjct: 178 VFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSL 237
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C+ L A+ ++ + +G N + Y ++ + +K + I + K D
Sbjct: 238 CELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDV 297
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
YCT++ K+ + + M++M+ + ++L+ K GK+E A L+
Sbjct: 298 VTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKR 357
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
+ G + + + LID LCK A L + M KIG N Y+ ++D + GK
Sbjct: 358 VVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGK 417
Query: 327 IDHAINVFESM---EVKDS-FTYSSMVHNLCKAKRLPSASKLL 365
+D A++ M +K S + Y+S+++ CK + +A +
Sbjct: 418 LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFM 460
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 132/288 (45%), Gaps = 5/288 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 162
F++++ ++R + + +F+ + K +PE+ T + L+ GL K A + ++
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 163 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
G P+ YT +++ + E+++ M+ G + Y +I K ++
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
EA + + ++ D+V+Y TL+ CK + E ++DEM F + + L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV--- 339
++GL K G I+ A ++ + G NL YN ++D L K K A +F+ M
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 340 -KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+ TYS ++ C+ +L +A L + +G+++ ++++G
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 86/176 (48%), Gaps = 2/176 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL-LSCSLDLLDEMLEM 60
+I+ C+ + + ++M+ P+ VTY + T+ + + +++L + +L+
Sbjct: 723 VINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK- 781
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + +YN L+ + G+ +EA+ + MI ++P T+ M+N LC+ A
Sbjct: 782 GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKA 841
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
+ ++ + + G P+ V YN LI G C AG + A + E+ G PN T T
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLI +C+ + ++ RM G+SPD +TY ++I R + + +++L + M E
Sbjct: 792 MLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK 851
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT 103
GI PD +YN+L+H G+ +A + +M+ L P T
Sbjct: 852 GIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 173/345 (50%), Gaps = 4/345 (1%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E +PDVVTY LI G L ++ LLDEM+ G+ P+ Y S++ L G
Sbjct: 284 EMASAPDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWIS 343
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+A RV +DM+ + A + +L+G C +A R F +Q+ G + VTY +I
Sbjct: 344 DALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMI 403
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
GLC+A L A +L+E+ + +TYT ++ + K ++ +AM ++G T
Sbjct: 404 NGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVT 463
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
+ Y + K G ++ A + + +M G++L+ +YN+LIN CK G LE A
Sbjct: 464 PNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRT 523
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
+ +M+ + D YT+T LID LCK+G++ A L+ M G + YN +++
Sbjct: 524 MADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCM 583
Query: 324 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
G+++ + + M K ++ TY+S++ C + S +++
Sbjct: 584 SGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEI 628
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 190/408 (46%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C + +L+ M G+ P+ Y S++A +S +L ++++M++
Sbjct: 296 ILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQR 355
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ D Y +++ G A R F +M L T+ M+NGLC+ + A
Sbjct: 356 KVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEA 415
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + + + VTY +LI G CK G++ A + + G PN +TYT +
Sbjct: 416 EKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDG 475
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + E+L M KG + Y ++I K G L++A M M T ++ D
Sbjct: 476 LCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPD 535
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +Y TLI+ CK G L+ A+ LL EM +G + T+ +L++G C +G ++G + L+
Sbjct: 536 VYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLD 595
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAK 356
+M + N YN ++ + + + +++ M +D TY+ ++ CKA+
Sbjct: 596 WMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKAR 655
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A ++ G R+ ++ A++ L EA+++ +R
Sbjct: 656 NMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMR 703
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 181/386 (46%), Gaps = 15/386 (3%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L R+R+ GISP N++++ LD E+ + +V SYN L+ L
Sbjct: 219 LLRRLRQYGISPSPEACNAVLS--------RLPLDEAIELFQELPHKNVCSYNILLKALC 270
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
G+ +A ++F +M P T+ I+++G C +NA+++ + G P
Sbjct: 271 DAGRVKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNAT 327
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
Y ++ LC G + A +++++ + YTT++ M
Sbjct: 328 VYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEM 387
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+RKG DG Y T+I + L+EA +++M + +D V+Y LI+ YCK GK+
Sbjct: 388 QRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKM 447
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A+ + + M ++G + T+T L DGLCK G+++ A L M+ G + N YN +
Sbjct: 448 AEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSL 507
Query: 318 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
++ L K G ++ A+ M+ D +TY++++ LCK+ L A LL L G+
Sbjct: 508 INGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGI 567
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKI 399
+ +++G SG KK+
Sbjct: 568 KPTIVTYNVLMNGFCMSGRVEGGKKL 593
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 142/285 (49%), Gaps = 2/285 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID YC+ + + N M + G++P+VVTY +L G + + + +LL EM
Sbjct: 436 VLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNK 495
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + +YNSL++ L + G ++A R DM L P T+ +++ LCK+ D A
Sbjct: 496 GLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRA 555
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK- 179
+ + + G P +VTYN+L+ G C +GR+ + +L + + PNA TY ++MK
Sbjct: 556 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQ 615
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
C N K EI M+ + + Y +I K +KEA + ++M+ G +L
Sbjct: 616 YCIEN-NMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRL 674
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
SY+ LI L K+ K A L +M K+G + + ID
Sbjct: 675 TATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYID 719
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 155/351 (44%), Gaps = 36/351 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ V + +L M + D VTY LI G + ++ + + + M++ G
Sbjct: 402 MINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRG 461
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V +Y +L L + G AN + +M L T+N ++NGLCK Y + A+
Sbjct: 462 VTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAM 521
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R + P++ TY LI LCK+G L A +L+E+ D G P +TY +M
Sbjct: 522 RTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMN-- 579
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
G+C GR++ ++ M+ + +
Sbjct: 580 --------------------------GFCMS-------GRVEGGKKLLDWMLEKNIHPNA 606
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN+L+ YC E +++ + M + ++ T+ ILI G CKA N+K A +
Sbjct: 607 ATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDE 666
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
M + GF +Y+ ++ L K K A +F M K+ T S V++
Sbjct: 667 MIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMR-KEGLTAESDVYDF 716
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 120/266 (45%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L D C+ A +L+ M G+ + TYNSLI G + L ++ + +M
Sbjct: 472 LTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTAC 531
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV++Y +L+ L + G D A+ + Q+M+ + P T+N+++NG C + +
Sbjct: 532 LKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGK 591
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + + P TYN L+K C +++ I K + PN TY ++K
Sbjct: 592 KLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGH 651
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R K L M +KG+ Y +I K + EA + M +G+ +
Sbjct: 652 CKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAES 711
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEM 267
Y+ I+L E LE+ L DE+
Sbjct: 712 DVYDFYIDLNFNEDNLESTLALCDEL 737
>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
Length = 719
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 186/403 (46%), Gaps = 6/403 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI A+C GY +LN+ + G+ P TYN LIAG + + ++L M+
Sbjct: 234 LIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARN 293
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P +++Y +++ L + + EA RVF D+ P + M++GLC+ A
Sbjct: 294 HLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEAR 353
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + G P TYN ++ G K+G A + E+ + G+ +T I+
Sbjct: 354 KLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISEL 413
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K E+ M G D Y ++I F K G++ E + + ++V Q +
Sbjct: 414 CSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSV 473
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLE 300
Y LI CK+G EAA LL +M +G + YT+ ++ G K+G+ + R L+ E
Sbjct: 474 SLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNE 533
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
NK G+ + N I+ L GK D A +F+ M D+ TY+S++ CK
Sbjct: 534 TCNK-GYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEG 592
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
++ + LL + G++ S+ +++ L +G AK++
Sbjct: 593 KVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRL 635
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 189/452 (41%), Gaps = 76/452 (16%)
Query: 16 YTILNRMREAGISPD--VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 73
+ M +AG + D T LI + ++ +LL++ L+ G+ P +YN L+
Sbjct: 211 FEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLI 270
Query: 74 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 133
Q + V MI + P T+ ++NGLCKN A R+F L+ G+
Sbjct: 271 AGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYA 330
Query: 134 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 193
P+ V Y +I GLC+ G AR + E+ D G PNA TY T++ ++ ++ E+
Sbjct: 331 PDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACEL 390
Query: 194 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 253
+ M KGY +I+ G+ EA + ++M G+Q D ++YN+LI +CK
Sbjct: 391 YNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCK 450
Query: 254 EGKL-----------------------------------EAAYLLLDEMEKQGFECDKYT 278
EGK+ EAA LL +M +G + YT
Sbjct: 451 EGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYT 510
Query: 279 HTILIDGLCKAGNIKGAR-LHLEYMNK--------------------------------- 304
+ ++ G K+G+ + R L+ E NK
Sbjct: 511 YDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMS 570
Query: 305 -IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLP 359
G ++ YN ++ K+GK+ ++N+ + + + +Y+S++ LC+
Sbjct: 571 ETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAE 630
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
SA +L + G+ + ++ ++ GL G
Sbjct: 631 SAKRLWGDMVSKGIEPHANLREHLISGLCKQG 662
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 181/394 (45%), Gaps = 6/394 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ Y + N +++ G +PD V Y ++I G + L EM++ G
Sbjct: 304 IINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKG 363
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ ++YN+++H + G + A ++ +M T T N +++ LC +D A
Sbjct: 364 MQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAF 423
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT-TIMKC 180
+F+ + + G + +TYN LI+G CK G++ +L EL P+ Y I+K
Sbjct: 424 EVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKS 483
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C ++ ++ +L M KG + + Y T++ +K G + + + G
Sbjct: 484 C-KDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTT 542
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ N +I+ C GK + A + +M + G + D T+ LI G CK G + + L
Sbjct: 543 TATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLN 602
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS----MVHNLCKAK 356
+ G + +Y ++ +L ++G + A ++ M K +++ ++ LCK
Sbjct: 603 ELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQG 662
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
R L+ L++ ++ K+A + + + L S
Sbjct: 663 RATEGMDRLMGMLENKIKPKKAAFEDLAECLIQS 696
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 147/347 (42%), Gaps = 6/347 (1%)
Query: 25 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 84
AG PD + + + ++++ ++ E GI + + NS++ + GK +
Sbjct: 150 AGFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTEL 209
Query: 85 ANRVFQDMI-CGDLTPC-TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
+Q+MI G + T T ++ C + + K G P TYN L
Sbjct: 210 LFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKL 269
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
I G C+A + +L + H P TY I+ +N + + + +K +GY
Sbjct: 270 IAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGY 329
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
D Y T+I ++G EA +M+ G+Q + +YNT+++ K G E A
Sbjct: 330 APDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACE 389
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
L +EM +G+ T +I LC G A + M++ G ++ YN ++
Sbjct: 390 LYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFC 449
Query: 323 KDGKIDHAINVFESMEVKDSFT----YSSMVHNLCKAKRLPSASKLL 365
K+GK+D +N+ + +D Y ++ CK +A +LL
Sbjct: 450 KEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLL 496
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 93/217 (42%), Gaps = 5/217 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ F+A +L M G+ P+ TY++++ G+ ++ +L +E
Sbjct: 478 LLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNK 537
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G + N ++ L GK DEA+ +F+ M + T+N ++ G CK +
Sbjct: 538 GYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKS 597
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + L G P +Y LI LC+ G +A+ + ++ G P+A ++
Sbjct: 598 MNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISG 657
Query: 181 CFRNRKYKLGLEILSAM-----KRKGYTFDGFGYCTV 212
+ + G++ L M K K F+ C +
Sbjct: 658 LCKQGRATEGMDRLMGMLENKIKPKKAAFEDLAECLI 694
>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 418
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 141/283 (49%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
E+LE G P ++ +N LMH + G+ A VF + L P +FN ++NG +
Sbjct: 126 EILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLG 185
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D R+ + G P++ T +LI GLCK ++ A + E+ D G PN +T+T
Sbjct: 186 DLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFT 245
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T++ ++ + L LEI M R+GY+ D Y T+I + G LK+A D + +M
Sbjct: 246 TLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMK 305
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G++ D ++Y TLI+ CKEG LE A+ L M ++ D +T LI GLC+ G A
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDA 365
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
L M +G Y I++ K G + A + + M+
Sbjct: 366 EKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQ 408
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 147/271 (54%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV++N+LI G R L L M
Sbjct: 141 ILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHAS 200
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++ L++ L + K DEAN +F +M+ L P TF +++G CK+ D A
Sbjct: 201 GVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLA 260
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +++ + + G+ P+L+TYN LI GLC+ G L+ AR ++ E+ G P+ ITYTT++
Sbjct: 261 LEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDG 320
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + E+ M + D Y +I+ + GR +A + +M++ G++ +
Sbjct: 321 SCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPE 380
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+Y +IN +CK+G ++ A LL EM++ G
Sbjct: 381 NGTYTMIINGFCKQGDVKTASKLLKEMQRDG 411
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 147/283 (51%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + G+ P V S+N+L++ +LG D
Sbjct: 129 ECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLD 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
+ R+ M + P T +++NGLCK D A +F + G VP VT+ LI
Sbjct: 189 KGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK+GR+ A I K++ G++P+ ITY T++ R K +++ M KG
Sbjct: 249 DGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A + ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
L EM G + + T+T++I+G CK G++K A L+ M + G
Sbjct: 369 LREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDG 411
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 145/302 (48%), Gaps = 4/302 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y ++ + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 107 VLEHLMKLKYFKLVWGFYKEILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCG 166
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ +++ T++ R G + +AM G D + +I K ++ EA
Sbjct: 167 LRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEAN 226
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ +M+ G+ + V++ TLI+ +CK G+++ A + +M +QG+ D T+ LI GL
Sbjct: 227 ELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGL 286
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
C+ G++K AR + M+ G + Y ++D K+G ++ A + + M + D
Sbjct: 287 CRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDD 346
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 402
Y++++ LC+ R A K+L L G++ +++G G + A K+ +
Sbjct: 347 VAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKE 406
Query: 403 IR 404
++
Sbjct: 407 MQ 408
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 152/335 (45%), Gaps = 6/335 (1%)
Query: 71 SLMHCLFQLGKPDEANRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
SL+ + D A+ VF ++ G F+ ++ ++ + +A+ FR +
Sbjct: 34 SLIQIVVSRKGKDSASAVFAAILETKGAQRSDIYVFSGLITAYLESGFLRDAIECFRLTR 93
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
KH F T +++ L K + KE+ + G+ + + +M + + +
Sbjct: 94 KHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPTSLYFFNILMHRFCKEGEIR 153
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
L + A+ + G + T+I ++++G L + M GV D+ + LI
Sbjct: 154 LAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLI 213
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
N CKE K++ A L +EM +G + T T LIDG CK+G + A + M + G+
Sbjct: 214 NGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYS 273
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
+L YN ++ L + G + A ++ M +K D TY++++ CK L +A +L
Sbjct: 274 PDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEL 333
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
++ +R+ A A++ GL G +A+K+
Sbjct: 334 RKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKM 368
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 89/172 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ D I +M G SPD++TYN+LI G R L + DL+ EM G
Sbjct: 247 LIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y +L+ + G + A + + MI + + +++GLC+ +A
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAE 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+M R + G PE TY ++I G CK G ++TA +LKE+ GH P +T
Sbjct: 367 KMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDGHVPCVVT 418
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ D + N M + G+ P+ VT+ +LI G ++ + +L++ +ML
Sbjct: 211 VLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQ 270
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN+L++ L + G +A + +M L P T+ +++G CK + A
Sbjct: 271 GYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETA 330
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + + + V Y LI GLC+ GR A +L+E+ G P TYT I+
Sbjct: 331 FELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIING 390
Query: 181 CFRNRKYKLGLEILSAMKRKGY 202
+ K ++L M+R G+
Sbjct: 391 FCKQGDVKTASKLLKEMQRDGH 412
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 173/354 (48%), Gaps = 4/354 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI AYC+ + + I+N M + G+ P + TYN++I G + + + +L EML +G
Sbjct: 7 LIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG 66
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +YN+L+ + EA +F +M+ + P +F+ ++ +NR+ D AL
Sbjct: 67 LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQAL 126
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
FR ++K G VP+ V Y +L+ G C+ G + A I E+ + G + I Y TI+
Sbjct: 127 VYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGL 186
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + ++ M +G D + + T+I + G + +A M ++ DI
Sbjct: 187 CKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDI 246
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTLI+ +CK G++E A L D M + + T+ ILI+ C G++ A +
Sbjct: 247 VAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDV 306
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 351
M + G L N ++ + G A M K D +Y++++++
Sbjct: 307 MIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIND 360
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 163/325 (50%), Gaps = 4/325 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ + IL M G+SPD TYN+L+ + R S + ++ EML G
Sbjct: 42 IINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQG 101
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ S++SLM + D+A F+DM L P + ++++G C+N AL
Sbjct: 102 VVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEAL 161
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + + G V +++ YN ++ GLCK L A + E+ + G P+ T+TT++
Sbjct: 162 KIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGH 221
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ L + M ++ D Y T+I F K+G +++A++ + M++ + +
Sbjct: 222 CQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNH 281
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y LIN YC G + A+ L D M ++G + T +I G C++G+ A L
Sbjct: 282 ITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGR 341
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGK 326
M G + +YN +++ DGK
Sbjct: 342 MIAKGVAPDHISYNTLIN----DGK 362
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 159/340 (46%), Gaps = 4/340 (1%)
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+YN+L+ + G +EA + M L P T+N ++NGLCK A + +
Sbjct: 3 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
G P+ TYN L+ C+ A+ I E+ G P+ ++++++M RNR
Sbjct: 63 LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
L MK+ G D Y ++ + + G + EA ++M+ G LD+++YNT+
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
+N CKE L A L DEM ++G D YT T LI G C+ GN+ A M +
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 242
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASK 363
++ AYN ++D K G+++ A +++ M + F TY +++ C + A +
Sbjct: 243 KPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFR 302
Query: 364 LLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L ++ G++ V+ G SG +A + ++
Sbjct: 303 LWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRM 342
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 171/365 (46%), Gaps = 5/365 (1%)
Query: 31 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 90
+VTYN+LI R LL + ++++ M + G+ P +++YN++++ L + G+ A +
Sbjct: 1 MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60
Query: 91 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 150
+M+ L+P T T+N +L C+ A +F + + G VP+LV+++ L+ +
Sbjct: 61 EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120
Query: 151 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
L A +++ G P+ + YT +M RN L+I M +G D Y
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
T++ K L +A ++MV G D ++ TLI+ +C++G + A L M ++
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
+ D + LIDG CK G ++ A + M N Y +++ G + A
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300
Query: 331 INVFESM---EVKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV-D 385
+++ M +K + T ++++ C++ A + L + GV + ++ D
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIND 360
Query: 386 GLRHS 390
G R S
Sbjct: 361 GKRRS 365
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 142/311 (45%), Gaps = 39/311 (12%)
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
T+N ++ C+ + A + + G P L TYN +I GLCK GR A+ IL E
Sbjct: 2 VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ + G +P+ TY T++ + + +R ++
Sbjct: 62 MLNIGLSPDTTTYNTLL---------------VESCRRDNFS------------------ 88
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
EA + +M+ GV D+VS+++L+ ++ + L+ A + +M+K G D +T+
Sbjct: 89 --EAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTV 146
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---- 337
L+ G C+ GN+ A + M + G ++ AYN I++ L K+ + A +F+ M
Sbjct: 147 LMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERG 206
Query: 338 EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
+ D +T+++++H C+ + A L + + ++ A ++DG G +A
Sbjct: 207 ALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKAS 266
Query: 398 KIQSKIRMAKI 408
++ + KI
Sbjct: 267 ELWDGMISRKI 277
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ YC+ + I + M E G DV+ YN+++ G + +L+ + L DEM+E
Sbjct: 146 VLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVER 205
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD +++ +L+H Q G +A +F M ++ P +N +++G CK + A
Sbjct: 206 GALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKA 265
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ G+ P +TY ILI C G + A + + + G P +T T++K
Sbjct: 266 SELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIK- 324
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
GYC + G +A +++ +M+ GV D
Sbjct: 325 ---------------------------GYC-------RSGDSSKADEFLGRMIAKGVAPD 350
Query: 241 IVSYNTLIN 249
+SYNTLIN
Sbjct: 351 HISYNTLIN 359
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 186/371 (50%), Gaps = 27/371 (7%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
++D ++ + M GI D+ TYN +I R S +L ++ +M++ G PDV + +
Sbjct: 84 NYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVS 143
Query: 71 SLMHCLFQLGKPDEANRVF---------QDMICG-DLTPCTATFNIMLNGLCKNRYTDNA 120
SL++ Q NRVF ++M C D+ +N +++G CK +NA
Sbjct: 144 SLINGFCQ------GNRVFGAVDLVSKMEEMRCKLDV----VIYNTIIDGFCKTGLVNNA 193
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F +++ G + VTYN L+ GLC +GR A +++++ PN IT+T ++
Sbjct: 194 LVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINA 253
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R K+ + M R+ D F Y ++I G++ EA ++ MVT G D
Sbjct: 254 FVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPD 313
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YNTLIN +CK +++ L+ EM ++G D T +I G +AG A+ E
Sbjct: 314 VVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQ---E 370
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
+++G N+ Y+ ++ L + +++ A+ +FESM+ D TY+ ++H +C
Sbjct: 371 IFSRMGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIG 430
Query: 357 RLPSASKLLLS 367
+ A L S
Sbjct: 431 NVEDAWDLFCS 441
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 166/337 (49%), Gaps = 3/337 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +CQ ++++M E DVV YN++I G + L++ +L L M G
Sbjct: 145 LINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDG 204
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D +YNSL+ L G+ +A R+ +DM+ D+ P TF ++N + A
Sbjct: 205 VRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAK 264
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + + P++ TYN +I GLC G++ A+ IL + G P+ +TY T++
Sbjct: 265 KFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGF 324
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ G +++ M ++G D + T+I + + GR A + +M G + +I
Sbjct: 325 CKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNI 381
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y+ L+ C ++E A +L + M+K E D T+ I+I G+C GN++ A
Sbjct: 382 RTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCS 441
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
++ G + ++ Y ++ + D A ++ M+
Sbjct: 442 LSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQ 478
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 159/326 (48%), Gaps = 6/326 (1%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
DEA +F +MI P F+ +L+ + K++ D + +F ++ G +L TYNI+
Sbjct: 51 DEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIV 110
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKG 201
I LC+ R A ++ ++ G+ P+ +T ++++ C NR + ++++S M+
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFG-AVDLVSKMEEMR 169
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
D Y T+I F K G + A +M DGV+ D V+YN+L+ C G+ A
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
L+ +M + + T T LI+ + G A+ E M + D ++ YN ++ L
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGL 289
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
G++D A + + M K D TY+++++ CK KR+ +KL+ + G+ +
Sbjct: 290 CMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDT 349
Query: 378 SAQKAVVDGLRHSGCRREAKKIQSKI 403
++ G +G A++I S++
Sbjct: 350 VTFNTIIQGYFQAGRPDAAQEIFSRM 375
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 175/381 (45%), Gaps = 5/381 (1%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
++ D + M ++ P +V ++ L++ ++ + L M GI D+++Y
Sbjct: 48 MNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTY 107
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N +++CL + + A V M+ P T + ++NG C+ A+ + +++
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEE 167
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK--CCFRNRKY 187
++V YN +I G CK G + A + + G + +TY +++ CC R
Sbjct: 168 MRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSD 227
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
++ M + + + +I AFV+ G+ EA + E+M+ + D+ +YN++
Sbjct: 228 --AARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSM 285
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
I+ C G+++ A +LD M +G D T+ LI+G CK + + M++ G
Sbjct: 286 IHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGL 345
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-TYSSMVHNLCKAKRLPSASKLLL 366
+ +N I+ + G+ D A +F M + + TYS +++ LC R+ A L
Sbjct: 346 VVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSRPNIRTYSILLYGLCYNWRVEKALVLFE 405
Query: 367 SCLKSGVRILKSAQKAVVDGL 387
S KS + + + V+ G+
Sbjct: 406 SMQKSEMELDITTYNIVIHGM 426
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 32/200 (16%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C D IL+ M G PDVVTYN+LI G + + L+ EM + G
Sbjct: 285 MIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRG 344
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM---------------IC------------ 94
+ D ++N+++ FQ G+PD A +F M +C
Sbjct: 345 LVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSRPNIRTYSILLYGLCYNWRVEKALVLF 404
Query: 95 -----GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
++ T+NI+++G+C ++A +F L G P++VTY +I G C+
Sbjct: 405 ESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRK 464
Query: 150 GRLRTARWILKELGDSGHAP 169
A ++ +++ + G P
Sbjct: 465 RLWDKADFLYRKMQEDGLLP 484
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 4/191 (2%)
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
L EA D M+ IV ++ L++ K + L ME G D YT+ I
Sbjct: 50 LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 340
+I+ LC+ A + M K G++ ++ + +++ + ++ A+++ ME
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169
Query: 341 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
D Y++++ CK + +A L + GVR ++V GL SG R +A
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229
Query: 398 KIQSKIRMAKI 408
++ + M I
Sbjct: 230 RLMRDMVMRDI 240
>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 418
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 143/271 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV+YN+L+ G R L L ML
Sbjct: 141 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 200
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN +F +M+ L P TF +++G CKN D A
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 260
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + P+L+TYN LI GLCK G L+ A ++ E+ G P+ ITYTT++
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDG 320
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + E M ++ D Y + + + GR +A + +M++ G++ D
Sbjct: 321 CCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPD 380
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+Y +IN +CK+G + LL EM++ G
Sbjct: 381 ARTYTMIINEFCKKGDVWKGSKLLKEMQRDG 411
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 152/296 (51%), Gaps = 2/296 (0%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ ++ + + + D + + G+ P V SYN+
Sbjct: 117 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 176
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M+ + P T+++++NGLCK D+A +F + G
Sbjct: 177 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 236
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP VT+ LI G CK GR+ A I K++ +P+ ITY T++ + K
Sbjct: 237 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAH 296
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
++ M KG D Y T+I K G L A ++ ++M+ + ++LD V+Y L +
Sbjct: 297 HLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGL 356
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIG 306
C+EG+ A +L EM G + D T+T++I+ CK G++ KG++L L+ M + G
Sbjct: 357 CQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKL-LKEMQRDG 411
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 139/284 (48%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E+LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 125 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ + G P++ TY++LI GLCK ++ A + E+ G PN +T+
Sbjct: 185 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A +++M
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSV 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG L++A+ M ++ D+ +T L GLC+ G
Sbjct: 305 KGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K G + + + M+
Sbjct: 365 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ 408
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 139/273 (50%), Gaps = 4/273 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
FNI+++ CK+ A +F + K G P +V+YN L+ G + G L + +
Sbjct: 139 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 198
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
SG P+ TY+ ++ + K E+ M KG +G + T+I K GR+
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A + +QM++ + D+++YNTLI CK+G L+ A+ L+DEM +G + DK T+T LI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 318
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK-IDHAINVFESMEV--- 339
DG CK G++ A H + M + + AY + L ++G+ +D + E + V
Sbjct: 319 DGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLK 378
Query: 340 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
D+ TY+ +++ CK + SKLL + G
Sbjct: 379 PDARTYTMIINEFCKKGDVWKGSKLLKEMQRDG 411
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 129/272 (47%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y + + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 107 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 166
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ ++Y T+M R G + SAM G D + Y +I K ++ +A
Sbjct: 167 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ + V++ TLI+ +CK G+++ A + +M Q D T+ LI GL
Sbjct: 227 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K A ++ M+ G + Y ++D K+G +D A + M + D
Sbjct: 287 CKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDE 346
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y+++ LC+ R A K+L L G++
Sbjct: 347 VAYTALXSGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 86/172 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ D I +M +SPD++TYN+LI G + L + L+DEM G
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y +L+ + G D A + MI ++ + + +GLC+ + +A
Sbjct: 307 LKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAE 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+M R + G P+ TY ++I CK G + +LKE+ GH P+ +T
Sbjct: 367 KMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 418
>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 179/391 (45%), Gaps = 9/391 (2%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L M G S D T ++ + MLE G PP+V +Y + + L
Sbjct: 95 LLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLC 154
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG-FVPEL 136
+ +A V ++M+ L P T +++GLCK +T+ A R+F L K + P +
Sbjct: 155 KRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNV 214
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
TY ++I G C+ G+L A +L + + G PN TYTT++ + + E+++
Sbjct: 215 HTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNK 274
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
MK++G+ + + Y VI F K G+++EA + + G++ D ++Y LI +CK+G
Sbjct: 275 MKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGH 334
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+ A L D M + G D +T LI C+ ++ ++ + IG + Y
Sbjct: 335 ITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTS 394
Query: 317 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++ K G+ A+ VFE M DS TY +++ LCK RL A L L
Sbjct: 395 MIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDK- 453
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
R++ V L CRRE I +
Sbjct: 454 -RLVPCEVTRVT--LTFEYCRREKTSIAVSV 481
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 159/338 (47%), Gaps = 1/338 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ + C+ F RM E G P+VV Y + I G + + + +L+EM+
Sbjct: 113 VVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGR 172
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDN 119
G+ P+V+++ +L+ L ++G + A R+F +I P T+ +M+ G C+
Sbjct: 173 GLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLAR 232
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + + + G P TY LI G CK G A ++ ++ G PN TY ++
Sbjct: 233 AEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVID 292
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ K + ++L +G FD Y +I K G + A D ++MV +G
Sbjct: 293 GFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCP 352
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DI +Y +LI+ YC++ ++E + D+ G K T+T +I G CK G A
Sbjct: 353 DIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVF 412
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
E M + G ++ Y ++ L K+ +++ A ++E M
Sbjct: 413 ERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGM 450
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 176/396 (44%), Gaps = 9/396 (2%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
SF + + M AG+SP + +L+ R + LL M G D +
Sbjct: 53 SFVYARKVFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCT 112
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
++ L + G+ + + F+ M+ P + ++GLCK RY A + +
Sbjct: 113 VVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGR 172
Query: 131 GFVPELVTYNILIKGLCKAGRL-RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G P + T+ LI GLCK G R R LK + S + PN TYT ++ R K
Sbjct: 173 GLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLAR 232
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+L M +G + Y T+I K G A + M +M +G +I +YN +I+
Sbjct: 233 AEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVID 292
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
+CK+GK++ AY +L QG + DK T+TILI CK G+I A + M + G
Sbjct: 293 GFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCP 352
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFES------MEVKDSFTYSSMVHNLCKAKRLPSASK 363
++EAY ++ + +++ + F+ + K TY+SM+ CK R A +
Sbjct: 353 DIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQ--TYTSMIAGYCKVGRSTLALR 410
Query: 364 LLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ +++G A++ GL EAK +
Sbjct: 411 VFERMVQNGCFADSITYGALISGLCKESRLEEAKAL 446
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 156/341 (45%), Gaps = 5/341 (1%)
Query: 37 LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 96
++A L + D++ EM G+P V + N ++ + G A +VF M
Sbjct: 9 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68
Query: 97 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 156
++P F ++ C+ + + + ++GF + T ++++ LC+ GR +
Sbjct: 69 VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 128
Query: 157 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 216
+ + ++G PN + YT + + R K +L M +G + + + T+I
Sbjct: 129 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188
Query: 217 VKIGRLKEATD-YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
KIG + A +++ + + + ++ +Y +I YC+EGKL A +LL M +QG + +
Sbjct: 189 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 248
Query: 276 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
T+T LI G CK G+ A + M + GF N+ YN ++D K GKI A V
Sbjct: 249 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 308
Query: 336 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
+ D TY+ ++ CK + A L +++G
Sbjct: 309 MATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENG 349
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 141/293 (48%), Gaps = 8/293 (2%)
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A M ++ HG + T N +++ + G AR + + +G +P + ++
Sbjct: 21 EAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGFGALV 80
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
C R K + +L+AM R G++ D V+ + + GR K+ +++ +M+ G
Sbjct: 81 VVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTP 140
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RL 297
++V+Y I+ CK ++ A+ +L+EM +G + + YTHT LIDGLCK G + A RL
Sbjct: 141 PNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRL 200
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHNLC 353
L+ + + N+ Y ++ ++GK+ A + + E ++ TY++++ C
Sbjct: 201 FLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHC 260
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
K A +L+ + G AV+DG G +EA K+ +RMA
Sbjct: 261 KGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKV---LRMA 310
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG----------------ATRNS 45
LI +C+ SFD + ++N+M++ G P++ TYN++I G AT
Sbjct: 255 LIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQG 314
Query: 46 L-------------------LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
L ++ +LDL D M+E G PD+ +Y SL+ Q + +E+
Sbjct: 315 LKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQ 374
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ F + L P T+ M+ G CK + ALR+F + ++G + +TY LI GL
Sbjct: 375 KFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGL 434
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM--KRKGYTF 204
CK RL A+ + + + D P +T T+ R K + + +L + +++ +T
Sbjct: 435 CKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQVHTV 494
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D V+ +G + A+ ++++++ + +D +Y IN C E Y L
Sbjct: 495 D-----VVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFIN-SCYENN---RYALA 545
Query: 265 DEMEKQ 270
EM ++
Sbjct: 546 SEMSEK 551
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 3/203 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI YCQ + ++ G+ P TY S+IAG + + +L + + M++ G
Sbjct: 360 LISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNG 419
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
D +Y +L+ L + + +EA +++ M+ L PC T + C+ T A+
Sbjct: 420 CFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAV 479
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L K ++ T +++++ L G + A LK++ D +A + TYT + C
Sbjct: 480 SVLDRLDKR---QQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSC 536
Query: 182 FRNRKYKLGLEILSAMKRKGYTF 204
+ N +Y L E+ +K +F
Sbjct: 537 YENNRYALASEMSEKFSKKISSF 559
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 113/268 (42%), Gaps = 5/268 (1%)
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
++ +AGRL A ++ E+ G T +++ + ++ M R G
Sbjct: 9 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ G+ ++ + G+++E + M G LD + ++ C++G+ +
Sbjct: 69 VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 128
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
M + G + +T IDGLCK +K A LE M G N+ + ++D L
Sbjct: 129 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188
Query: 322 GKDGKIDHAINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
K G + A +F + S+ TY+ M+ C+ +L A LL+ ++ G++
Sbjct: 189 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 248
Query: 377 KSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ ++ G G A ++ +K++
Sbjct: 249 TNTYTTLIGGHCKGGSFDRAFELMNKMK 276
>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 447
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 182/366 (49%), Gaps = 4/366 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
+ ++ +M GI P++VT N LI ++ S +L ++L++G PD + N+
Sbjct: 81 YPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNT 140
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM L G+ + ++ ++ +LNGLCK T A+++ R ++
Sbjct: 141 LMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRS 200
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
P++V Y+ +I GLCK + A E+ G PN ITY+T++ +
Sbjct: 201 TRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAF 260
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+L+ M K + + Y +I A K G++KEA + +M G D+V+YN++++
Sbjct: 261 SLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGL 320
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
CK L+ A L +M+K G + +KYT+T LIDGLCK G +K A+ +++ G ++
Sbjct: 321 CKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDV 380
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
YN ++ L K+G D A+ + ME + ++ T+ ++ +L + A KLL
Sbjct: 381 RTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHG 440
Query: 368 CLKSGV 373
+ G+
Sbjct: 441 MIAKGL 446
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 164/346 (47%), Gaps = 4/346 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D + NR+ +P ++ + ++ + ++ L +M GI P++ + N L
Sbjct: 47 DDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNIL 106
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
++C LG+ + V ++ P T T N ++ GLC +L + GF
Sbjct: 107 INCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGF 166
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
V+Y L+ GLCK G R A +L+ + D P+ + Y+TI+ +++ +
Sbjct: 167 QMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYD 226
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
S M +G + Y T+I F G+L A + +M+ + ++ +YN LI+ C
Sbjct: 227 FFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALC 286
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
KEGK++ A LL EM +G D T+ ++DGLCK+ N+ A M K G N
Sbjct: 287 KEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKY 346
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
Y ++D L K G++ +A +F+ + VK D TY+ M+ LCK
Sbjct: 347 TYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCK 392
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 154/321 (47%), Gaps = 4/321 (1%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
D+ F ++ TP F +L L K ++ A+ + R ++ G P LVT NIL
Sbjct: 47 DDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNIL 106
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
I C G++ + +L ++ G+ P+ IT T+MK + K L + +G+
Sbjct: 107 INCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGF 166
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
+ Y T++ KIG + A + + + D+V Y+T+I+ CK+ + AY
Sbjct: 167 QMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYD 226
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
EM +G + T++ LI G C AG + GA L M + N+ YN ++D L
Sbjct: 227 FFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALC 286
Query: 323 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
K+GK+ A + M K D TY+S++ LCK++ L A+ L + K G++ K
Sbjct: 287 KEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKY 346
Query: 379 AQKAVVDGLRHSGCRREAKKI 399
A++DGL G + A+K+
Sbjct: 347 TYTALIDGLCKGGRLKNAQKL 367
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 159/340 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C +++L ++ + G PD +T N+L+ G + SL D+++
Sbjct: 105 ILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQ 164
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G + SY +L++ L ++G+ A ++ + + P ++ +++GLCK++ + A
Sbjct: 165 GFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQA 224
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
F + G P ++TY+ LI G C AG+L A +L E+ PN TY ++
Sbjct: 225 YDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDA 284
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K K ++L+ M KG D Y +V+ K L +AT +M G+Q +
Sbjct: 285 LCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPN 344
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y LI+ CK G+L+ A L + +G D T+ ++I GLCK G A
Sbjct: 345 KYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKS 404
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
M G N ++ I+ L + + D A + M K
Sbjct: 405 KMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAK 444
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 101/200 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C +++LN M I+P+V TYN LI + + + LL EM G
Sbjct: 246 LIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKG 305
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P DV +YNS++ L + D+A +F M + P T+ +++GLCK NA
Sbjct: 306 QPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQ 365
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F+ L G ++ TYN++I GLCK G A + ++ D+G PNA+T+ I++
Sbjct: 366 KLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSL 425
Query: 182 FRNRKYKLGLEILSAMKRKG 201
F + ++L M KG
Sbjct: 426 FEKDENDKAEKLLHGMIAKG 445
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 176/361 (48%), Gaps = 14/361 (3%)
Query: 30 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 89
D +++ I A R L L+ M + I P ++ + GKPD+A ++F
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 90 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
+M A+FN +L+ LCK++ + A +FR L+ F + VTYN+++ G C
Sbjct: 150 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLI 208
Query: 150 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 209
R A +LKE+ + G PN TY T++K FR + + E MK++ D Y
Sbjct: 209 KRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 268
Query: 210 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
TV+ F G +K A + ++M+ +GV + +YN +I + CK+ +E A ++ +EM +
Sbjct: 269 TTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVR 328
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 329
+G+E + T+ +LI GL AG ++ M G + N + YN ++ + +++
Sbjct: 329 RGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEK 388
Query: 330 AINVFESMEVKDSF----TYSSMVHNLCKAKRLPS---------ASKLLLSCLKSGVRIL 376
A+ +FE M D TY+ ++ + KR A ++L KSG R+L
Sbjct: 389 ALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAKEILRLQSKSGSRLL 448
Query: 377 K 377
+
Sbjct: 449 R 449
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 93/179 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++ +C +L M E GI+P++ TYN+++ G R + + + EM +
Sbjct: 200 VILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKR 259
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
DV +Y +++H G+ A VF +MI + P AT+N M+ LCK +NA
Sbjct: 260 DCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENA 319
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
+ MF + + G+ P + TYN+LI+GL AG +++ + + G PN TY +++
Sbjct: 320 VVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIR 378
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 137/321 (42%), Gaps = 12/321 (3%)
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT--DNALRMFRGLQKHG--FVP 134
L P+ ++ Q ++ TP T ++N + K + AL+ F L H +V
Sbjct: 33 LSSPNTTHQDDQFLLSTKTTPWTPN---LVNSVLKRLWNHGPKALQFFHFLDNHHREYVH 89
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
+ ++++ I + T ++ + P+ T+ + + K +++
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
M G D + T++ K R+++A + + + +D V+YN ++N +C
Sbjct: 150 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF-RALRGRFSVDTVTYNVILNGWCLI 208
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
+ A +L EM ++G + T+ ++ G +AG I+ A M K + ++ Y
Sbjct: 209 KRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 268
Query: 315 NCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
+V G G+I A NVF+ M + TY++M+ LCK + +A + ++
Sbjct: 269 TTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVR 328
Query: 371 SGVRILKSAQKAVVDGLRHSG 391
G + ++ GL H+G
Sbjct: 329 RGYEPNVTTYNVLIRGLFHAG 349
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 63/129 (48%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + M G+ P V TYN++I + + ++ + +EM+ G P+V +YN L+ LF
Sbjct: 287 VFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLF 346
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
G+ + Q M P T+N+M+ + + AL +F + +P L
Sbjct: 347 HAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLD 406
Query: 138 TYNILIKGL 146
TYNILI G+
Sbjct: 407 TYNILISGM 415
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 52/110 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C+ + + + M G P+V TYN LI G S +L+ M G
Sbjct: 306 MIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEG 365
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 111
P+ +YN ++ + + ++A +F+ M GD P T+NI+++G+
Sbjct: 366 CEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 73/161 (45%), Gaps = 5/161 (3%)
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLH 298
D S++ I++ + + L+ M T I+ + AG K +L
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---DSFTYSSMVHNLCKA 355
L M++ G +L ++N I+D L K +++ A +F ++ + D+ TY+ +++ C
Sbjct: 150 LN-MHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLI 208
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
KR P A ++L ++ G+ + ++ G +G R A
Sbjct: 209 KRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHA 249
>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
virgata]
Length = 418
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 143/271 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ + N + + G+ P VV++N+L+ G R L L M
Sbjct: 141 ILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHAS 200
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN +F +M+ L P TF ++ G CKNR D A
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLA 260
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + P+L+TYN LI GLCK G L+ A ++ E+ G P+ ITYTT++
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDG 320
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + + E M ++ D Y +I+ + GR +A + +M++ G++ D
Sbjct: 321 CCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPD 380
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+Y +IN +CK+G + LL EM++ G
Sbjct: 381 TGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 141/284 (49%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E+L+ G P ++ +N LMH + G A VF + L P +FN ++NG +
Sbjct: 125 EEILDCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ + G P++ TY++LI GLCK ++ A + E+ D G PN +T+
Sbjct: 185 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +NR+ L +EI M + + D Y T+I K G LK+A D +++M
Sbjct: 245 TTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG LE A+ M ++ D +T LI GLC+ G
Sbjct: 305 KGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K G + + + M+
Sbjct: 365 AEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 134/254 (52%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 112
+ + + + G+ P V S+N+LM+ +LG DE R+ M + P T+++++NGLC
Sbjct: 158 VFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLC 217
Query: 113 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 172
K D+A +F + G VP VT+ LI G CK R+ A I K++ +P+ I
Sbjct: 218 KESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLI 277
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
TY T++ + K +++ M KG D Y T+I K G L+ A ++ ++M
Sbjct: 278 TYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRM 337
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
+ + ++LD V+Y LI+ C+EG+ A +L EM G + D T+T++I+ CK G++
Sbjct: 338 IQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDV 397
Query: 293 KGARLHLEYMNKIG 306
L+ M + G
Sbjct: 398 WTGSKLLKEMQRDG 411
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 126/272 (46%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 107 VLEHLMKLKYFKLVWGFYEEILDCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWG 166
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ +++ T+M R G + SAM G D + Y +I K ++ +A
Sbjct: 167 LRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
++M+ G+ + V++ TLI +CK +++ A + +M Q D T+ LI GL
Sbjct: 227 GLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K A ++ M+ G + Y ++D K+G ++ A + M + D
Sbjct: 287 CKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDD 346
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 347 VAYTALISGLCQEGRYLDAEKVLREMLSVGLK 378
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ D + + M + G+ P+ VT+ +LIAG +N + ++++ +ML
Sbjct: 211 VLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQ 270
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+ +YN+L++ L + G +A+ + +M L P T+ +++G CK + A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETA 330
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + + V Y LI GLC+ GR A +L+E+ G P+ TYT I+
Sbjct: 331 FEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMIINE 390
Query: 181 CFRNRKYKLGLEILSAMKRKGY 202
+ G ++L M+R G+
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGH 412
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 2/173 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ D I +M +SPD++TYN+LI G + L + DL+DEM G
Sbjct: 247 LIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN-RYTDNA 120
+ PD +Y +L+ + G + A + MI ++ + +++GLC+ RY D A
Sbjct: 307 LKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLD-A 365
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
++ R + G P+ TY ++I CK G + T +LKE+ GH P+ ++
Sbjct: 366 EKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVS 418
>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
Length = 1152
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 185/396 (46%), Gaps = 50/396 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD---EML 58
LI+ YC+ FD + + + M AGI P TYN I C +D E+L
Sbjct: 351 LIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICAL-------CDFGRIDDARELL 403
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
PDV SYN+LMH ++GK EA+ +F D+ GD+ P T+N +++GLC++ +
Sbjct: 404 SSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 463
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A R+ + P+++TY L+KG K G L A + E+ G P+ YTT
Sbjct: 464 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 523
Query: 179 KCCFR----NRKYKLGLEILSA--------------------------------MKRKGY 202
R ++ ++L E+++ + R G
Sbjct: 524 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 583
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
D Y TVI +++ G+ K A + ++M+ + +++Y LI + K G+LE A+
Sbjct: 584 VPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQ 643
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
EM+K+G + TH L+ G+CKAGNI A +L M + G N +Y ++ +
Sbjct: 644 YSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNC 703
Query: 323 KDGKIDHAINVFESM---EVK-DSFTYSSMVHNLCK 354
K + + +++ M E++ D +T+ ++ +L K
Sbjct: 704 DFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 739
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 173/390 (44%), Gaps = 9/390 (2%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
+M G P V N ++ + +++ + + + M+E GI P V ++N+++ F+
Sbjct: 228 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 287
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
G + ++++ +M ++ T+NI++NG KN + A R +++ GF +
Sbjct: 288 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 347
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
+N LI+G CK G A + E+ ++G P TY + + E+LS+M
Sbjct: 348 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 407
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
D Y T++ ++K+G+ EA+ + + + IV+YNTLI+ C+ G LE
Sbjct: 408 AP----DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 463
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A L +EM Q D T+T L+ G K GN+ A + M + G + AY
Sbjct: 464 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 523
Query: 319 DRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ G D A + E M D Y+ + LCK L A + + G+
Sbjct: 524 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 583
Query: 374 RILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
V+ G +G + A+ + ++
Sbjct: 584 VPDHVTYTTVIRGYLENGQFKMARNLYDEM 613
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 175/421 (41%), Gaps = 44/421 (10%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ M E GI P V+T+N+++ + L + EM I +YN L++
Sbjct: 262 VYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFS 321
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ GK +EA R DM +FN ++ G CK D+A + + G P
Sbjct: 322 KNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTS 381
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYNI I LC GR+ AR +L + AP+ ++Y T+M + K+ + +
Sbjct: 382 TYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDL 437
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ Y T+I + G L+ A E+M T + D+++Y TL+ + K G L
Sbjct: 438 RAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNL 497
Query: 258 EAAYLLLDEMEKQGFECDKYTHT------------------------------------I 281
A + DEM ++G + D Y +T +
Sbjct: 498 SMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNV 557
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 341
IDGLCK GN+ A + ++G + Y ++ ++G+ A N+++ M K
Sbjct: 558 RIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR 617
Query: 342 SF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
+ TY +++ KA RL A + K GVR A++ G+ +G EA
Sbjct: 618 LYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAY 677
Query: 398 K 398
+
Sbjct: 678 R 678
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 144/311 (46%), Gaps = 10/311 (3%)
Query: 42 TRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 101
T+ S+ L ++M+ G P V + N ++ L ++A+ V++ MI + P
Sbjct: 216 TKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTV 275
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
TFN ML+ K + +++ +++ VTYNILI G K G++ AR +
Sbjct: 276 ITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGD 335
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ SG A ++ +++ + + + M G Y I A GR
Sbjct: 336 MRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGR 395
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
+ +A + + M D+VSYNTL++ Y K GK A LL D++ T+
Sbjct: 396 IDDARELLSSMAAP----DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNT 451
Query: 282 LIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 340
LIDGLC++GN++GA RL E ++ F ++ Y +V K+G + A V++ M K
Sbjct: 452 LIDGLCESGNLEGAQRLKEEMTTQLIF-PDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 510
Query: 341 ----DSFTYSS 347
D + Y++
Sbjct: 511 GIKPDGYAYTT 521
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 118/257 (45%), Gaps = 8/257 (3%)
Query: 112 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 171
K + L F + + GF+P + NI++K L + + A + + + + G P
Sbjct: 216 TKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTV 275
Query: 172 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 231
IT+ T++ CF+ + +I MKR+ F Y +I F K G+++EA +
Sbjct: 276 ITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGD 335
Query: 232 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
M G + S+N LI YCK+G + A+ + DEM G T+ I I LC G
Sbjct: 336 MRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGR 395
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSS 347
I AR L M ++ +YN ++ K GK A +F+ + D TY++
Sbjct: 396 IDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNT 451
Query: 348 MVHNLCKAKRLPSASKL 364
++ LC++ L A +L
Sbjct: 452 LIDGLCESGNLEGAQRL 468
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + + + + M++ G+ P+V+T+N+L+ G + + + L +M E
Sbjct: 627 VLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEE 686
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
GIPP+ +SY L+ +C F+ K +E +++++M+ ++ P T + L K+
Sbjct: 687 GIPPNKYSYTMLISKNCDFE--KWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 740
>gi|410109951|gb|AFV61055.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
velutina]
Length = 406
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 151/285 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P V+YN+L+ G R +L L ML
Sbjct: 122 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLAS 181
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+A+ +F +M+ L P TF +++G CKN D A
Sbjct: 182 GVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 241
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + +P+L+TYN LI GLCK G L+ A ++ ++ G P+ ITYTT++
Sbjct: 242 MEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDG 301
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + E + ++ D Y +I+ + GR +A + +M++ G+ D
Sbjct: 302 CCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPD 361
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y +IN +CK+G + LL EM++ G T+ +L++G
Sbjct: 362 TGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 406
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 158/309 (51%), Gaps = 2/309 (0%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ ++ + + + D + + G+ P SYN+
Sbjct: 98 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNT 157
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M+ + P T+++++NGLCK D+A +F + G
Sbjct: 158 LMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKG 217
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP VT+ LI G CK GR+ A I K++ P+ ITY T++ + K
Sbjct: 218 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAH 277
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+++ M RKG D Y T+I K G L A ++ ++++ + ++LD V Y LI+
Sbjct: 278 DLIDDMSRKGLKPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGL 337
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 310
C+EG+ A +L EM G D T+T++I+ CK G++ KG++L L+ M + G +
Sbjct: 338 CQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKL-LKEMQRDGHVPS 396
Query: 311 LEAYNCIVD 319
+ YN +++
Sbjct: 397 VVTYNVLMN 405
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 145/298 (48%), Gaps = 1/298 (0%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E+LE G P ++ +N LMH + G A VF + L P ++N ++NG +
Sbjct: 106 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRL 165
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ + G P++ TY++LI GLCK ++ A + E+ G PN +T+
Sbjct: 166 GVLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTF 225
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + D Y T+I K G LK+A D ++ M
Sbjct: 226 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSR 285
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG L +A+ + ++ D +T LI GLC+ G
Sbjct: 286 KGLKPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVD 345
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
A L M +G + + Y I++ K G + + + M+ +D S + +N+
Sbjct: 346 AEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQ-RDGHVPSVVTYNV 402
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 130/271 (47%), Gaps = 4/271 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y + + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 88 VLEYLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 147
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+A++Y T+M R G + SAM G D + Y +I K ++ +A
Sbjct: 148 LRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAD 207
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ + V++ TLI+ +CK G+++ A + +M Q D T+ LI GL
Sbjct: 208 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 267
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI----DHAINVFESMEVKDS 342
CK G++K A ++ M++ G + Y ++D K+G + +H + + D
Sbjct: 268 CKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRLDD 327
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
Y++++ LC+ R A K+L L G+
Sbjct: 328 VVYTALISGLCQEGRSVDAEKMLREMLSVGL 358
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 168/333 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI A C+F + ++M GI PDVVT+ +LI ++ + + + + M++ G
Sbjct: 155 LIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQG 214
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P++ +YNSL++ L + D A R+F+ M+ + ++N ++NG C + T+ A+
Sbjct: 215 EAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAM 274
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR +Q P + TY IL+K L + GR+RTA+ + + G +P+ TYT ++
Sbjct: 275 TLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGL 334
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N + +++ ++K Y Y +I + R + A + +++ T G+ +I
Sbjct: 335 CKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNI 394
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN +IN CKEGKL A L +ME+ G E D+ + +I G + ++ A L+
Sbjct: 395 VTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKR 454
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
M + F N +V+ D + N F
Sbjct: 455 MREKNFSPNDSVTLMLVNLYAADAQSSELPNNF 487
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 193/415 (46%), Gaps = 39/415 (9%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
++G P++VT ++L+ G + +L+L D+M G D+ Y L++ L + +
Sbjct: 2 KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
A + + M+ + T+ ++++ LCK+ L+MFR + G P ++ Y+ LI
Sbjct: 62 RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
GLC+ G+LR A + E+ G N ITY +++ R +K S M +G
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181
Query: 204 FDGFGYCTVIAAFVKIGRLKEA-----------------------------------TDY 228
D + T+I K G+++EA
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRL 241
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
E MV G+++D++SYNTLIN YC GK E A L +M+ + T+TIL+ L +
Sbjct: 242 FEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQ 301
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF---ESMEVKDSF-T 344
G I+ A+ M G +L+ Y ++D L K+G I+ AI+VF +S++ K S
Sbjct: 302 NGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRI 361
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
YS ++ + +A+R SA ++ G+ +++GL G EA+++
Sbjct: 362 YSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERL 416
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 140/285 (49%), Gaps = 4/285 (1%)
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
K G+ P LVT + L+KG+C G++ A + ++ SG + + Y ++ + R+ +
Sbjct: 2 KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
+E+ M + + + F Y VI + K G + +M+ G+ +++ Y++LI
Sbjct: 62 RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
N C+ GKL A L DEM QG + + T+ LI C+ G K A M G
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKL 364
++ + ++D L K GK+ A +FE M E + TY+S+++ LC ++ A +L
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRL 241
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
++ G++I + +++G SG EA + K++ +++
Sbjct: 242 FEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELT 286
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 183/377 (48%), Gaps = 5/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMRE-AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
+LI YC+ D +L M+E A + PD Y LI G R + ++ LLDEML
Sbjct: 301 LLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLR 360
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+G+ +++ NSL++ + G+ EA V M+ +L P + ++N +L+G C+ +T
Sbjct: 361 LGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 420
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + + + G P ++TYN L+KGLC+ G A I + G AP+ + Y+T++
Sbjct: 421 AFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLD 480
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
F+ ++ + + +G+T + T+I+ K+G++ EA + ++M G
Sbjct: 481 GLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP 540
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D ++Y TLI+ YCK + A+ + ME++ + LI GL K+ + L
Sbjct: 541 DGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLL 600
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
M G N+ Y ++D K+G +D A + + M + S+MV L +
Sbjct: 601 TEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRL 660
Query: 356 KRLPSASKLLLSCLKSG 372
R+ A+ L+ + G
Sbjct: 661 GRIDEANLLMQKMVDHG 677
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/475 (24%), Positives = 208/475 (43%), Gaps = 72/475 (15%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D YC+ + + ++M + GI P V+TYN+L+ G R +L + M++ G
Sbjct: 408 LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXG 467
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD Y++L+ LF++ + A+ +++D++ T TFN M++GLCK A
Sbjct: 468 VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAE 527
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ G P+ +TY LI G CKA + A + + +P+ Y +++
Sbjct: 528 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGL 587
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGF-------GYC------------------------ 210
F++R+ ++L+ M +G T + G+C
Sbjct: 588 FKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANI 647
Query: 211 ----TVIAAFVKIGRLKEATDYMEQMVTDG--------VQLDI----------------- 241
T+++ ++GR+ EA M++MV G ++ DI
Sbjct: 648 IICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCK 707
Query: 242 -------VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
+ YN I CK GK++ A + +GF D +T+ LI G AGN+
Sbjct: 708 TFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDE 767
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVH 350
A + M + G N+ YN +++ L K +D A +F + K F TY++++
Sbjct: 768 AFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLID 827
Query: 351 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL-RHSGCRREAKKIQSKIR 404
CK + +A KL ++ G+ A+++GL +H R K + I+
Sbjct: 828 GYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIK 882
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 193/407 (47%), Gaps = 13/407 (3%)
Query: 7 CQFVSFDAGYTILNRM----REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
C+F D G I + + RE SP V ++ ++ L +L + D M + G
Sbjct: 132 CKFK--DRGNVIWDELVGVYREFAFSPTV--FDMILKVYVEKGLTKNALYVFDNMGKCGR 187
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P + S NSL++ L + G+ A+ V+Q MI + P +IM+N CK+ D A
Sbjct: 188 IPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAG 247
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ ++ G P +VTY+ LI G G + A+ +LK + + G + N +TYT ++K
Sbjct: 248 FVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYC 307
Query: 183 RNRKYKLGLEILSAMKRKGYTF-DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K ++L M+ + D Y +I + + G++ +A +++M+ G++ ++
Sbjct: 308 KQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNL 367
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
N+LIN YCK G++ A ++ M + D Y++ L+DG C+ G+ A +
Sbjct: 368 FICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDK 427
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M + G + + YN ++ L + G D A+ ++ M D YS+++ L K +
Sbjct: 428 MLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMEN 487
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
AS L L G + ++ GL G EA++I K++
Sbjct: 488 FEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 534
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 181/379 (47%), Gaps = 13/379 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C+ I ++M++ G SPD +TY +LI G + S + + + M
Sbjct: 513 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREX 572
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P + YNSL+ LF+ + E + +M LTP T+ +++G CK D A
Sbjct: 573 ISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 632
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + ++G ++ + ++ GL + GR+ A +++++ D G P+ + +K
Sbjct: 633 SSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD---HECFLKSD 689
Query: 182 FRNRKYKLGLEILSAMKRKGYTF---DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
R Y +I ++ TF + Y IA K G++ +A + + G
Sbjct: 690 IR---YAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFV 746
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
D +Y TLI+ Y G ++ A+ L DEM ++G + T+ LI+GLCK+ N+ A+
Sbjct: 747 PDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRL 806
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
+++ G N+ YN ++D K G +D A + + M + TYS++++ LCK
Sbjct: 807 FHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCK 866
Query: 355 AKRLPSASKLLLSCLKSGV 373
+ + KLL +K+GV
Sbjct: 867 HGDIERSMKLLNQMIKAGV 885
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 172/396 (43%), Gaps = 41/396 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ + + + M ISP + YNSLI+G ++ L DLL EM G
Sbjct: 548 LIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRG 607
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++ +Y +L+ + G D+A + +M L+ + M++GL + D A
Sbjct: 608 LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEAN 667
Query: 122 RMFRGLQKHGFVPEL--------------------------------VTYNILIKGLCKA 149
+ + + HGF P+ + YNI I GLCK
Sbjct: 668 LLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKT 727
Query: 150 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 209
G++ AR L G P+ TY T++ + M R+G + Y
Sbjct: 728 GKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTY 787
Query: 210 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
+I K + A ++ G+ ++V+YNTLI+ YCK G ++AA+ L D+M +
Sbjct: 788 NALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIE 847
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV---------DR 320
+G T++ LI+GLCK G+I+ + L M K G DS L Y +V +
Sbjct: 848 EGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNE 907
Query: 321 LGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAK 356
+ K + +N F + K S+ + +V C +
Sbjct: 908 MSKPEALKQNMNCFLLPKFKHSWKFVGVVALDCPIR 943
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 189/443 (42%), Gaps = 40/443 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++A+C+ D + +M G+ P++VTY+SLI G + + +L M E
Sbjct: 231 IMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEK 290
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDN 119
G+ +V +Y L+ + K DEA +V + M L P + ++++G C+ D+
Sbjct: 291 GVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDD 350
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD--------------- 164
A+R+ + + G L N LI G CK G + A ++ + D
Sbjct: 351 AVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLD 410
Query: 165 ----SGHA----------------PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
GH P +TY T++K R + L+I M + G
Sbjct: 411 GYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAP 470
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D GY T++ K+ + A+ + ++ G +++NT+I+ CK GK+ A +
Sbjct: 471 DEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIF 530
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
D+M+ G D T+ LIDG CKA N+ A M + ++E YN ++ L K
Sbjct: 531 DKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKS 590
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
++ ++ M ++ + TY +++ CK L A ++G+
Sbjct: 591 RRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIIC 650
Query: 381 KAVVDGLRHSGCRREAKKIQSKI 403
+V GL G EA + K+
Sbjct: 651 STMVSGLYRLGRIDEANLLMQKM 673
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 186/402 (46%), Gaps = 15/402 (3%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ + M + G P + + NSL+ +N + + +M+ +GI PDV+ + +++
Sbjct: 178 VFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFC 237
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ GK DEA + M + P T++ ++NG + A + + + + G +V
Sbjct: 238 KDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVV 297
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGLEILSA 196
TY +LIKG CK ++ A +L+ + + P+ Y ++ R K + +L
Sbjct: 298 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M R G + F ++I + K G + EA + +MV ++ D SYNTL++ YC+EG
Sbjct: 358 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 417
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
A+ L D+M ++G E T+ L+ GLC+ G A M K G + Y+
Sbjct: 418 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYST 477
Query: 317 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL-----LS 367
++D L K + A +++ + K T+++M+ LCK ++ A ++ L
Sbjct: 478 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 537
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
C G+ + ++DG + +A K++ + IS
Sbjct: 538 CSPDGI-----TYRTLIDGYCKASNVGQAFKVKGAMEREXIS 574
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 196/393 (49%), Gaps = 7/393 (1%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++ ++M++ G++PD+VTYNSLI G + LL S L +EM ++G PDV +YN+L++C
Sbjct: 273 SLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCF 332
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
+ + +A +M L P T++ +++ LCK A++ +++ G P
Sbjct: 333 CKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNE 392
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
TY LI CKAG L A + E+ N +TYTT++ + + ++ A
Sbjct: 393 FTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRA 452
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M + G T + Y ++ +K R++ A + ++++ ++ D++ Y T+I C + K
Sbjct: 453 MIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNK 512
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
LE ++ EM+ G + +TI +D K G A L+ M +G + + +
Sbjct: 513 LEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCV 572
Query: 317 IVDRLGKDGKIDHAINVFESM-----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++D L K G ++ AI+ F M + + ++++ LCK + +A KL
Sbjct: 573 LIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDK 632
Query: 372 GVRILKSAQKAVVDG-LRHSGCRREAKKIQSKI 403
+ K A A++DG L+H +EA I+S++
Sbjct: 633 NMVPDKIAYTALIDGNLKHKDF-QEALNIRSRM 664
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 166/330 (50%), Gaps = 1/330 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LIDA C+ L MR G+SP+ TY SLI + LS +L L DEML++
Sbjct: 363 LIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQ 422
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ +V +Y +L+ L + G+ EA +F+ MI +TP T+ +++G KN+ +NAL
Sbjct: 423 VGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENAL 482
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +++ P+L+ Y +I GLC +L +++ E+ G N++ YT M
Sbjct: 483 ELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAY 542
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ K L +L M G +C +I K G ++EA DY +M +Q +
Sbjct: 543 FKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNN 602
Query: 242 VSYNT-LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+ T LI+ CK +EAA L DEM+ + DK +T LIDG K + + A
Sbjct: 603 VAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRS 662
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
M+++G + +L AY +V L + + A
Sbjct: 663 RMSELGMELDLHAYTSLVWGLSQGNLVQQA 692
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 170/377 (45%), Gaps = 9/377 (2%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P +++L + +L + M + P S N+ ++ L + GK D +N+
Sbjct: 180 PGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKF 239
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
F+DM+ + T+NIM+ +CK A +F +++ G P++VTYN LI G K
Sbjct: 240 FRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGK 299
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
G L + + +E+ D G P+ ITY ++ C + + L MK G +
Sbjct: 300 LGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVT 359
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y T+I A K L++A ++ M G+ + +Y +LI+ CK G L A L DEM
Sbjct: 360 YSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEML 419
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
+ + T+T L+DGLCK G + A M K G NL+ Y +V K+ +++
Sbjct: 420 QVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVE 479
Query: 329 HA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 384
+A + E D Y +++ LC +L ++ G+R +V+
Sbjct: 480 NALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIR-----ANSVI 534
Query: 385 DGLRHSGCRREAKKIQS 401
+R + K +++
Sbjct: 535 YTIRMDAYFKTGKTVEA 551
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 19/418 (4%)
Query: 9 FVSFDAGYTI---LNRMREAG----------ISPDVVTYNSLIAGATRNSLLSCSLDLLD 55
F FDA +++ L + EAG + P + N+ + + S
Sbjct: 182 FGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFR 241
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
+M+ GI V++YN ++ + + G A +F M LTP T+N +++G K
Sbjct: 242 DMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLG 301
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D + +F ++ G P+++TYN LI CK ++ A L E+ +SG PN +TY+
Sbjct: 302 LLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYS 361
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T++ + + ++ L M+R G + + F Y ++I A K G L +A ++M+
Sbjct: 362 TLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQV 421
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
V ++V+Y TL++ CKEG++ A L M K G + T+T L+ G K ++ A
Sbjct: 422 QVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENA 481
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHN 351
L+ + + +L Y I+ L K++ V M+ +S Y+ +
Sbjct: 482 LELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDA 541
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
K + A LL GV + ++DGL G EA I RMA +
Sbjct: 542 YFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEA--IDYFARMADFN 597
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 114/244 (46%), Gaps = 3/244 (1%)
Query: 29 PDVVTYNSLIAG-ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
PD++ Y ++I G ++N L C ++ EM GI + Y M F+ GK EA
Sbjct: 495 PDLLLYGTIIWGLCSQNKLEECEF-VMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALN 553
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY-NILIKGL 146
+ Q+M + TF ++++GLCK + A+ F + P V LI GL
Sbjct: 554 LLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGL 613
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK + A+ + E+ D P+ I YT ++ +++ ++ L I S M G D
Sbjct: 614 CKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDL 673
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +++ + +++A ++ +M+ G+ D + L+ Y + G ++ A L DE
Sbjct: 674 HAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDE 733
Query: 267 MEKQ 270
+ K+
Sbjct: 734 LLKK 737
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 26/297 (8%)
Query: 120 ALRMFRGLQ-KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
AL+ FR + K GF +Y +L+ L A A + LKEL S
Sbjct: 112 ALKFFRWAKTKFGFCLTTESYCLLVHILFYARMYFDANFFLKELISS------------- 158
Query: 179 KCCFRNRKYKLGLEILSAM-KRKGYTFDGFG-YCTVIAAFVKIGRLKEATDYMEQMVTDG 236
R+ G ++ + + GFG + + + F+++G L+EA +M
Sbjct: 159 ------RRILPGFDVFEVLWSTRNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFR 212
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
V S N + K GK + + +M G +T+ I+I +CK G++ A+
Sbjct: 213 VFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAK 272
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNL 352
M ++G ++ YN ++D GK G +D + +FE M+ D TY+++++
Sbjct: 273 SLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCF 332
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
CK +++P A L SG++ ++D L ++A K +R +S
Sbjct: 333 CKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLS 389
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID + F I +RM E G+ D+ Y SL+ G ++ +L+ + L+EM+ G
Sbjct: 644 LIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKG 703
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
I PD L+ ++LG DEA + +++
Sbjct: 704 IVPDEILCIRLLRKYYELGSIDEAIELHDELL 735
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID C+ +A + + M++ + PD + Y +LI G ++ +L++ M E+G
Sbjct: 609 LIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELG 668
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTP 99
+ D+ +Y SL+ L Q +A +MI + P
Sbjct: 669 MELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVP 706
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 182/397 (45%), Gaps = 42/397 (10%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
++N ISP+ +++N +I + + ++++ M E PD ++Y +LM L
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLC 233
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ + DEA + +M +P +N++++GLCK ++ + G VP V
Sbjct: 234 KEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEV 293
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN LI GLC G+L A +L+ + S PN +TY T++ + R+ + +LS+M
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM 353
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK- 256
+ +GY + Y +I+ K G+ +EA +M G + +IV Y+ L++ C+EGK
Sbjct: 354 EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKP 413
Query: 257 ----------------------------------LEAAYLLLDEMEKQGFECDKYTHTIL 282
E A + EM+K G +K+ +++L
Sbjct: 414 NEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVL 473
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----- 337
IDGLC G +K A + M IG + AY+ I+ L G +D A+ ++ M
Sbjct: 474 IDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEE 533
Query: 338 --EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
D TY+ ++ LC K + A LL S L G
Sbjct: 534 PKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRG 570
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 198/414 (47%), Gaps = 15/414 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIA---GATRNSLLSCSLDLLDEML 58
+I++Y FD+ +L+R+R + V+ S I + L ++DL M+
Sbjct: 83 MIESYANSGDFDSVEKLLSRIR---LENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMV 139
Query: 59 -EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL----TPCTATFNIMLNGLCK 113
E V S+NS+++ + G + ++ ++ +P +FN+++ LCK
Sbjct: 140 DEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCK 199
Query: 114 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
R+ D A+ +FRG+ + +P+ TY L+ GLCK R+ A +L E+ G +P+ +
Sbjct: 200 LRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVI 259
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
Y ++ + +++ M KG + Y T+I G+L +A +E+MV
Sbjct: 260 YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
+ + V+Y TLIN K+ + A LL ME++G+ +++ +++LI GL K G +
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE 379
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
A M + G N+ Y+ +VD L ++GK + A + M + +++TYSS++
Sbjct: 380 EAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
K A ++ K+G K ++DGL G +EA + SK+
Sbjct: 440 KGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKM 493
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 184/438 (42%), Gaps = 93/438 (21%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D C+ D +L+ M+ G SP V YN LI G + L+ L+D M G
Sbjct: 228 LMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKG 287
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +YN+L+H L GK D+A + + M+ P T+ ++NGL K R +A+
Sbjct: 288 CVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAV 347
Query: 122 RMFRGLQKHGF-----------------------------------VPELVTYNILIKGL 146
R+ +++ G+ P +V Y++L+ GL
Sbjct: 348 RLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGL 407
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C+ G+ A+ IL + SG PNA TY+++MK F+ + +++ M + G + +
Sbjct: 408 CREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNK 467
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGV----------------------------- 237
F Y +I +GR+KEA +M+T G+
Sbjct: 468 FCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHE 527
Query: 238 ---------QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC- 287
Q D+V+YN L++ C + + A LL+ M +G + D T ++ L
Sbjct: 528 MLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSE 587
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 343
K+ + R LE + V RL K ++ A + E M K +
Sbjct: 588 KSNSCDKGRSFLEEL---------------VVRLLKRQRVSGACTIVEVMLGKYLAPKTS 632
Query: 344 TYSSMVHNLCKAKRLPSA 361
T++ +V +CK K++ +A
Sbjct: 633 TWAMIVREICKPKKINAA 650
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 166/365 (45%), Gaps = 8/365 (2%)
Query: 31 VVTYNSLIAGATRNSLLSCSLDLLDEM----LEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
V ++NS++ L L+ D + + M I P+ S+N ++ L +L D A
Sbjct: 148 VKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAI 207
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
VF+ M P T+ +++GLCK D A+ + +Q G P V YN+LI GL
Sbjct: 208 EVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGL 267
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK G L ++ + G PN +TY T++ K + +L M +
Sbjct: 268 CKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPND 327
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T+I VK R +A + M G L+ Y+ LI+ KEGK E A L +
Sbjct: 328 VTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRK 387
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M ++G + + +++L+DGLC+ G A+ L M G N Y+ ++ K G
Sbjct: 388 MAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGL 447
Query: 327 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
+ A+ V++ M+ ++ F YS ++ LC R+ A + L G++ A +
Sbjct: 448 CEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSS 507
Query: 383 VVDGL 387
++ GL
Sbjct: 508 IIKGL 512
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 121/263 (46%), Gaps = 17/263 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ + ILNRM +G P+ TY+SL+ G + L ++ + EM +
Sbjct: 402 VLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKT 461
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G + + Y+ L+ L +G+ EA V+ M+ + P T ++ ++ GLC D A
Sbjct: 462 GCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAA 521
Query: 121 LRMFRGL---QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
L+++ + ++ P++VTYNIL+ GLC + A +L + D G P+ IT T
Sbjct: 522 LKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTF 581
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ L S KG +F ++ +K R+ A +E M+ +
Sbjct: 582 LN----------TLSEKSNSCDKGRSF----LEELVVRLLKRQRVSGACTIVEVMLGKYL 627
Query: 238 QLDIVSYNTLINLYCKEGKLEAA 260
++ ++ CK K+ AA
Sbjct: 628 APKTSTWAMIVREICKPKKINAA 650
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 190/411 (46%), Gaps = 8/411 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ + D Y++ + M + G SPDVVTY+S+I+ ++ + + + M++ G
Sbjct: 213 VINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNG 272
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD Y SL+H GKP EA +F+ M + P T+ +++ LCKN + A
Sbjct: 273 VMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEAR 332
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F L K G P+ TY L+ G G L +L + G + IM
Sbjct: 333 KIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAY 392
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ K L + S M+++G D Y TV+ GR+ +A + ++G+ +I
Sbjct: 393 AKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNI 452
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V + TLI+ C K + L EM +G D ++ LCK G + A+ +
Sbjct: 453 VVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDL 512
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN-----VFESMEVKDSFTYSSMVHNLCKAK 356
M +IG + N YN ++D DGK+D A+ VF ++ D TY+++++ +
Sbjct: 513 MVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSD-VTYNTIINGYSQNG 571
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
R+ LL GV + ++ GL +G AK++ +RM K
Sbjct: 572 RIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELY--LRMIK 620
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 191/393 (48%), Gaps = 6/393 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYN 70
DA +L RM E G PD+ +Y L+ G + +LDLL M + P DV +Y
Sbjct: 152 DAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYT 211
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
++++ L + G+ D+A +F M+ +P T++ +++ L K + D A ++F + K+
Sbjct: 212 TVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKN 271
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G +P+ + Y L+ G C +G+ + A I K++ G P+ +TYT +M +N K
Sbjct: 272 GVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEA 331
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+I ++ ++G+ D Y T++ + G L E D ++ M+ G+QL +N ++
Sbjct: 332 RKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGA 391
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
Y K K++ A L+ M +QG D + ++D LC AG + A + G N
Sbjct: 392 YAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPN 451
Query: 311 LEAYNCIVDRLGKDGKIDHAINV-FESMEVK---DSFTYSSMVHNLCKAKRLPSASKLLL 366
+ + ++ L K D + FE ++ D+ +++++ NLCK R+ A L
Sbjct: 452 IVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFD 511
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
++ G+ + ++DG G EA K+
Sbjct: 512 LMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKL 544
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 172/391 (43%), Gaps = 46/391 (11%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI---PPDVWSYNSL 72
+ + +R+ + G + N ++ R S + ++ L + M G P++ +Y +
Sbjct: 47 HQVFDRLLKRGDRASIFDLNRALSDVARASP-AVAISLFNRMPRAGATSAAPNIATYGIV 105
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM-FRGLQKHG 131
+ C +LG+ D A +I L F+ +L GLC R T +A+ + R + + G
Sbjct: 106 IGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIVLRRMPELG 165
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGD-SGHAP-NAITYTTIMKCCFRNRKYKL 189
P+L +Y IL+KGLC + A +L + D G P + + YTT++ R +
Sbjct: 166 CKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDK 225
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+ AM +G + D Y ++I+A K + +AT +MV +GV D + Y +L++
Sbjct: 226 AYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVH 285
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR------------- 296
YC GK + A + +M + G E D T+T L+D LCK G AR
Sbjct: 286 GYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKP 345
Query: 297 --------LH--------------LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
LH L+ M K G +N I+ K K+D A+ VF
Sbjct: 346 DSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVF 405
Query: 335 ESMEVK----DSFTYSSMVHNLCKAKRLPSA 361
+M + D Y +++ LC A R+ A
Sbjct: 406 SNMRQQGLNPDIVNYGTVLDILCTAGRVDDA 436
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 108/233 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M++ AY + D + + MR+ G++PD+V Y +++ + +L + +
Sbjct: 387 MIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSE 446
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P++ + +L+H L K D+ + +MI + T FN ++ LCK A
Sbjct: 447 GLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEA 506
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + + G P TYN LI G C G++ A +L + +G P+ +TY TI+
Sbjct: 507 KNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIING 566
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
+N + + GL +L M KG Y ++ + GR A + +M+
Sbjct: 567 YSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMI 619
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC D +L M G+ P VTYN++I G ++N + L LL EM G
Sbjct: 528 LIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKG 587
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 96
+ P + +Y L+ LFQ G+ A ++ MI D
Sbjct: 588 VNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIKWD 622
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 190/411 (46%), Gaps = 8/411 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ + D Y++ + M + G SPDVVTY+S+I+ ++ + + + M++ G
Sbjct: 214 VINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNG 273
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD Y SL+H GKP EA +F+ M + P T+ +++ LCKN + A
Sbjct: 274 VMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEAR 333
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F L K G P+ TY L+ G G L +L + G + IM
Sbjct: 334 KIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAY 393
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ K L + S M+++G D Y TV+ GR+ +A + ++G+ +I
Sbjct: 394 AKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNI 453
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V + TLI+ C K + L EM +G D ++ LCK G + A+ +
Sbjct: 454 VVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDL 513
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN-----VFESMEVKDSFTYSSMVHNLCKAK 356
M +IG + N YN ++D DGK+D A+ VF ++ D TY+++++ +
Sbjct: 514 MVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSD-VTYNTIINGYSQNG 572
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
R+ LL GV + ++ GL +G AK++ +RM K
Sbjct: 573 RIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELY--LRMIK 621
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 189/388 (48%), Gaps = 6/388 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHC 75
+L RM E G PD+ +Y L+ G + +LDLL M + P DV +Y ++++
Sbjct: 158 VLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVING 217
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
L + G+ D+A +F M+ +P T++ +++ L K + D A ++F + K+G +P+
Sbjct: 218 LLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPD 277
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
+ Y L+ G C +G+ + A I K++ G P+ +TYT +M +N K +I
Sbjct: 278 CIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFD 337
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
++ ++G+ D Y T++ + G L E D ++ M+ G+QL +N ++ Y K
Sbjct: 338 SLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHN 397
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
K++ A L+ M +QG D + ++D LC AG + A + G N+ +
Sbjct: 398 KVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFT 457
Query: 316 CIVDRLGKDGKIDHAINV-FESMEVK---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++ L K D + FE ++ D+ +++++ NLCK R+ A L ++
Sbjct: 458 TLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRI 517
Query: 372 GVRILKSAQKAVVDGLRHSGCRREAKKI 399
G+ + ++DG G EA K+
Sbjct: 518 GIEPNTNTYNTLIDGYCLDGKMDEAMKL 545
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 108/233 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M++ AY + D + + MR+ G++PD+V Y +++ + +L + +
Sbjct: 388 MIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSE 447
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P++ + +L+H L K D+ + +MI + T FN ++ LCK A
Sbjct: 448 GLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEA 507
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F + + G P TYN LI G C G++ A +L + +G P+ +TY TI+
Sbjct: 508 KNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIING 567
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
+N + + GL +L M KG Y ++ + GR A + +M+
Sbjct: 568 YSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMI 620
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 156/370 (42%), Gaps = 45/370 (12%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI---PPDVWSYNSL 72
+ + +R+ + G + N ++ R S + ++ L + M G P++ +Y +
Sbjct: 47 HQVFDRLLKRGDRASIFDLNRALSDVARASP-AVAISLFNRMPRAGATSAAPNIATYGIV 105
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ C +LG+ D A +I L R+ N L Q
Sbjct: 106 IGCCRRLGRLDLAFATVGRVITTGL-----------------RHEPNPL------QSSSQ 142
Query: 133 VPELVTYNILIKGLCKAG-RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
P LC AG R +L+ + + G P+ +YT ++K ++ + L
Sbjct: 143 GP-----------LCTAGGRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQAL 191
Query: 192 EILSAMK-RKGY-TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
++L M KG D Y TVI ++ G+L +A + M+ G D+V+Y+++I+
Sbjct: 192 DLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIIS 251
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
K ++ A + M K G D +T L+ G C +G K A + M + G +
Sbjct: 252 ALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEP 311
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 365
++ Y ++D L K+GK A +F+S+ DS TY +++H L LL
Sbjct: 312 DVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLL 371
Query: 366 LSCLKSGVRI 375
+K G+++
Sbjct: 372 DLMMKKGMQL 381
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC D +L M G+ P VTYN++I G ++N + L LL EM G
Sbjct: 529 LIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKG 588
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 96
+ P + +Y L+ LFQ G+ A ++ MI D
Sbjct: 589 VNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIKWD 623
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 110/226 (48%), Gaps = 11/226 (4%)
Query: 189 LGLEILSAMKRKGYTFDGFG---YCTVIAAFVKIGRLKEATDYMEQMVTDGV--QLDIVS 243
+ + + + M R G T Y VI ++GRL A + +++T G+ + + +
Sbjct: 79 VAISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQ 138
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA--RLHLEY 301
++ L G+ ++L M + G + D +++TIL+ GLC + A LH+
Sbjct: 139 SSSQGPLCTAGGRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMA 198
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 357
+K ++ AY +++ L ++G++D A ++F++M D TYSS++ L K +
Sbjct: 199 DHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQA 258
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ A+++ +K+GV ++V G SG +EA I K+
Sbjct: 259 MDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKM 304
>gi|356574876|ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Glycine max]
Length = 589
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 180/391 (46%), Gaps = 35/391 (8%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D LN+M +G PD +TYN +I G +N L +LDL+++M G PD +YNS+
Sbjct: 182 DEACKTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSI 241
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ CLF G ++A ++D + P T+ +++ +CK AL + + G
Sbjct: 242 IRCLFDKGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEGC 301
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P++VTYN L+ K G+ ++ L G PNA+TY T++ + + +
Sbjct: 302 YPDIVTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDD 361
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
IL M Y ++ K G L A + MVT+ DI++YNTL++ C
Sbjct: 362 ILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLC 421
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
KEG ++ LL+ + T+ I+IDGL + G+++ A+ E
Sbjct: 422 KEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAK---------------E 466
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
Y+ +VD+ G I D T+SS+ C+A +L A++LL
Sbjct: 467 LYDEMVDK----GII------------PDEITHSSLTWGFCRADQLEEATELLKEMSMKE 510
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
RI +A + V+ GL CR++ I ++
Sbjct: 511 QRIKNTAYRCVILGL----CRQKKVDIAIQV 537
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 144/295 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C++ +L M G PD+VTYNSL+ ++ + ++ +L
Sbjct: 275 VLIELVCKYCGAARALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSH 334
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ +YN+L+H L G DE + + + M P T+NI+LNGLCK+ D A
Sbjct: 335 GMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRA 394
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + P+++TYN L+ GLCK G + +L L + +P +TY ++
Sbjct: 395 ISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDG 454
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + E+ M KG D + ++ F + +L+EAT+ +++M ++
Sbjct: 455 LARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEMSMKEQRIK 514
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
+Y +I C++ K++ A +LD M K D+ ++ LI + G +K A
Sbjct: 515 NTAYRCVILGLCRQKKVDIAIQVLDLMVKGQCNPDERIYSALIKAVADGGMLKEA 569
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 168/376 (44%), Gaps = 8/376 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
M+I C+ + ++ M +G SPD +TYNS+I + +++ + L
Sbjct: 205 MVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCLFDKGNFNQAVNFWRDQLRK 264
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN-RYTDN 119
G PP + +Y L+ + + A V +DM P T+N ++N K +Y D
Sbjct: 265 GCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDT 324
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
AL + L HG P VTYN LI L G ILK + ++ P +TY ++
Sbjct: 325 ALVIL-NLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSPPTHVTYNILLN 383
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
++ + S M + + D Y T+++ K G + E + +V
Sbjct: 384 GLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSP 443
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+V+YN +I+ + G +E+A L DEM +G D+ TH+ L G C+A ++ A L
Sbjct: 444 GLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCRADQLEEATELL 503
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-----DSFTYSSMVHNLCK 354
+ M+ AY C++ L + K+D AI V + M VK D YS+++ +
Sbjct: 504 KEMSMKEQRIKNTAYRCVILGLCRQKKVDIAIQVLDLM-VKGQCNPDERIYSALIKAVAD 562
Query: 355 AKRLPSASKLLLSCLK 370
L A+ L + +K
Sbjct: 563 GGMLKEANDLHQTLIK 578
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 184/380 (48%), Gaps = 8/380 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I C+ D G+ +L +M E G+SP+VV Y +LI G +N + L +M E+
Sbjct: 169 IMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGEL 228
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ + ++Y L++ F++G + +++ M + P T+N M+ C + +NA
Sbjct: 229 DVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNA 288
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK- 179
+F +++ G +VTYN LI GLC+ R+ A ++ + G +PN I+Y T++
Sbjct: 289 FELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDG 348
Query: 180 -CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
C N L + MK G + Y +IA F + TD + +M G+
Sbjct: 349 YCSIGNLDKASSL--FNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLS 406
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
V+Y L++ + +E A+ + MEK G D Y + +LI GLC G++K A
Sbjct: 407 PSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKL 466
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 354
+ ++++ N YN ++ K+G A+ + + M V + +Y+S + LCK
Sbjct: 467 FKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCK 526
Query: 355 AKRLPSASKLLLSCLKSGVR 374
++ A LL ++ G++
Sbjct: 527 DEKWTEAEVLLKDMIELGLK 546
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 160/317 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ + + G + +M+ GI P+V TYNS+I + L+ + +L DEM E
Sbjct: 239 VLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRER 298
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ +V +YN+L+ L Q + EA R+ M L+P ++N +++G C D A
Sbjct: 299 GVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKA 358
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F ++ G P L TYNILI G +A +++E+ G +P+ +TYT +M
Sbjct: 359 SSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDA 418
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R+ + +I S+M++ G D + Y +I +G +KEA+ + + ++ +
Sbjct: 419 LVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPN 478
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V YNT+I YCKEG A LL EM + G + ++ I LCK A + L+
Sbjct: 479 DVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLK 538
Query: 301 YMNKIGFDSNLEAYNCI 317
M ++G ++ +N I
Sbjct: 539 DMIELGLKPSISIWNMI 555
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 167/376 (44%), Gaps = 40/376 (10%)
Query: 31 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 90
V+ + ++I R+ L +L ++M+ G+ P ++N+L+ L + ++A RVF
Sbjct: 95 VLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFN 154
Query: 91 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 150
+ G++ +F IM+ G C+ Y D + +++ G P +V Y LI G CK G
Sbjct: 155 E-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNG 213
Query: 151 RLRTARWILKELGD-----------------------------------SGHAPNAITYT 175
+ + + ++G+ +G PN TY
Sbjct: 214 DIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYN 273
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
+++ C + K E+ M+ +G + Y T+I + R+ EA M +M D
Sbjct: 274 SMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRD 333
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G+ +++SYNTLI+ YC G L+ A L ++M+ G T+ ILI G +A N G
Sbjct: 334 GLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGV 393
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 351
+ M G + Y ++D L + I+ A ++ SME V D + Y ++H
Sbjct: 394 TDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHG 453
Query: 352 LCKAKRLPSASKLLLS 367
LC + ASKL S
Sbjct: 454 LCVVGDMKEASKLFKS 469
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 169/349 (48%), Gaps = 7/349 (2%)
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P V + ++++ + P++A F MI L P + TFN +L L K+ + + A R
Sbjct: 92 PTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWR 151
Query: 123 MFRGLQKHGFVP-ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + G V ++ ++ I+IKG C+ G L +L ++ + G +PN + YTT++ C
Sbjct: 152 VFN--ETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGC 209
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N + G ++ M + + Y +I F K+G K+ + E+M G+ ++
Sbjct: 210 CKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNV 269
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN++I C +GKL A+ L DEM ++G C+ T+ LI GLC+ + A +
Sbjct: 270 YTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCR 329
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKR 357
M + G NL +YN ++D G +D A ++F M+ TY+ ++ +AK
Sbjct: 330 MKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKN 389
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
+ ++ G+ K ++D L S +A +I S + A
Sbjct: 390 SAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKA 438
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 35/218 (16%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC + D ++ N+M+ +G SP + TYN LIAG + + D++ EM G
Sbjct: 345 LIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARG 404
Query: 62 IPP-----------------------------------DVWSYNSLMHCLFQLGKPDEAN 86
+ P D++ Y L+H L +G EA+
Sbjct: 405 LSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEAS 464
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
++F+ + L P +N M+ G CK + ALR+ + + ++G VP + +YN I+ L
Sbjct: 465 KLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQIL 524
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
CK + A +LK++ + G P+ + I K F N
Sbjct: 525 CKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARFDN 562
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 4/177 (2%)
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
V+LD+ S+ +I C+ G L+ + +L +ME+ G + +T LIDG CK G+I+ +
Sbjct: 160 VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGK 219
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNL 352
M ++ +N Y +++ K G I ++E M+ V + +TY+SM+
Sbjct: 220 QLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRC 279
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
C +L +A +L + GV ++ GL EA+++ +++ +S
Sbjct: 280 CNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLS 336
>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 809
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 177/367 (48%), Gaps = 1/367 (0%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D I +++ G++P+ TY I G R L+ ++D+ +M E G+ P+ +SY +
Sbjct: 201 DMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTF 260
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ L G+ D +V QD+I + + +++ G C A + R ++K GF
Sbjct: 261 IEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGF 320
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P++ Y LI G C G L A + E+ G N + ++I++ +
Sbjct: 321 APDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVAN 380
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
K+ G FD Y V+ A K+G+++EA + + +M + DI++Y T+I+ Y
Sbjct: 381 QFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYF 440
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
+GK+ A + EM+ G + D T+ +L G + G + A L YM G +
Sbjct: 441 LKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTV 500
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
+N I++ L GK+D A F+++E K YS+MV+ C+A + A LL+ K G
Sbjct: 501 THNMIIEGLCIGGKVDDAQAFFDNLEEKCLENYSAMVNGYCEANHVNKAFALLIRLSKQG 560
Query: 373 VRILKSA 379
RILK A
Sbjct: 561 -RILKKA 566
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 175/369 (47%), Gaps = 8/369 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I +C + +IL M + G +PDV Y +LI+G L +L L DEM+
Sbjct: 294 VVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSK 353
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + +S++ L Q+G E F++ + A +N++++ LCK + A
Sbjct: 354 GVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEA 413
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + ++ VP+++ Y +I G G++ A I +E+ D GH P+ +TY +
Sbjct: 414 VELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGG 473
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
RN + L +L+ M+ +G D + +I G++ +A + + + ++
Sbjct: 474 FSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLE-- 531
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y+ ++N YC+ + A+ LL + KQG K + L+ LC G+ + A LE
Sbjct: 532 --NYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLE 589
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + + + Y+ ++ L + G+++ A VF + D TY+ M++ C+
Sbjct: 590 TMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMN 649
Query: 357 RLPSASKLL 365
++ A +L
Sbjct: 650 KMKEAWHVL 658
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 171/362 (47%), Gaps = 28/362 (7%)
Query: 15 GYTILNRMREAGISPDVVTYNSLIA-----GATR--NSLL------SCSLDL----LDEM 57
++ N+++E+G S D TY +++ G +R +S+L +LD L E
Sbjct: 76 AFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIVNLFEA 135
Query: 58 LEMGIPPDVWSY-----NSLMHCLFQLGKPDEA-NRVFQDMICGDLTPCTATFNIMLNGL 111
L GI + +S ++L+ G D+A + + Q CG P + N ++N L
Sbjct: 136 LGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCG-FAPQILSCNFLMNRL 194
Query: 112 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 171
++R D A+ ++R L+ G P TY I IKG C+ G L A + +++ +SG PN+
Sbjct: 195 VESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNS 254
Query: 172 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 231
+YTT ++ + + LG ++L + D F Y VI F +LKEA + +
Sbjct: 255 FSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILRE 314
Query: 232 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 291
M G D+ Y LI+ YC G L A L DEM +G + + + ++ GL + G
Sbjct: 315 MEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGM 374
Query: 292 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSS 347
+ K+G + YN ++D L K GK++ A+ + M+ V D Y++
Sbjct: 375 ASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTT 434
Query: 348 MV 349
++
Sbjct: 435 VI 436
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 170/393 (43%), Gaps = 23/393 (5%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++DA C+ + +L M+ + PD++ Y ++I+G + +L++ EM ++
Sbjct: 399 VVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDI 458
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN L + G EA + M + P T T N+++ GLC D+A
Sbjct: 459 GHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDA 518
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
F L++ L Y+ ++ G C+A + A +L L G ++ ++
Sbjct: 519 QAFFDNLEEKC----LENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGN 574
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ L +L M Y VI A + G +++A +V G+ D
Sbjct: 575 LCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPD 634
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL---------------IDG 285
+++Y +IN YC+ K++ A+ +L +M+ +G E D T+T+L +D
Sbjct: 635 VITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDA 694
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKD 341
+ N+ M + ++ Y ++D+ K I AIN+F M D
Sbjct: 695 MKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPD 754
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
+ TY++++ C + A L L G+R
Sbjct: 755 TVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIR 787
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 135/313 (43%), Gaps = 48/313 (15%)
Query: 17 TILNRMREAGISPDVVTYNSLIAG-----------ATRNSL------------------- 46
++LN M G+ PD VT+N +I G A ++L
Sbjct: 485 SLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLENYSAMVNGYCEAN 544
Query: 47 -LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 105
++ + LL + + G S+ L+ L G ++A + + M+ ++ P ++
Sbjct: 545 HVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYS 604
Query: 106 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
++ L + + A +F L G P+++TY I+I G C+ +++ A +L ++ +
Sbjct: 605 KVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNR 664
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG----------------Y 209
G P+ ITYT ++ C + + L AMK K D Y
Sbjct: 665 GIEPDVITYTVLLNNCSK-IDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICY 723
Query: 210 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
+I K +++A + +M+ G+ D V+Y L++ YC G ++ A +L DEM
Sbjct: 724 TVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLN 783
Query: 270 QGFECDKYTHTIL 282
+G D +T ++L
Sbjct: 784 KGIRPDAHTMSVL 796
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I A Q + + N + + G++PDV+TY +I G R + + + +L +M G
Sbjct: 606 VIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRG 665
Query: 62 IPPDVWSYNSLMHCLFQLG-----------KPDE----ANRVFQDMICGDLTPCTATFNI 106
I PDV +Y L++ ++ K E + ++ +M D+ P + +
Sbjct: 666 IEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTV 725
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+++ CK +A+ +F + G P+ VTY L+ G C G ++ A + E+ + G
Sbjct: 726 LIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKG 785
Query: 167 HAPNAITYTTIMKCCFRNRK 186
P+A T +++ C + RK
Sbjct: 786 IRPDAHT-MSVLHCILKVRK 804
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 84/224 (37%), Gaps = 17/224 (7%)
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
L + +K GY+ D + Y ++ G ++ + +++ LD ++
Sbjct: 75 LAFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDF----GIV 130
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
NL+ G D + + F LI +G A L GF
Sbjct: 131 NLFEALG---------DGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFA 181
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKL 364
+ + N +++RL + K+D AI ++ ++ + +TY+ + C+ L A +
Sbjct: 182 PQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDV 241
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+SGV + ++GL G K+ + AKI
Sbjct: 242 FRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKI 285
>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 418
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 146/292 (50%), Gaps = 1/292 (0%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E LE G P ++ +N LMH + G+ A VF + L P +FN ++NG K
Sbjct: 125 EESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
+ R+ +Q G P++ TY++LI GLCK ++ A + E+ D+G PN +T+
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + + D Y T+I K G LK+A D +++M
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG LE A+ M K+ D +T LI GLC+ G
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYS 346
A L M +G + Y I++ K G + + + M+ +D + S
Sbjct: 365 AEKMLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQ-RDGYVPS 415
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 150/272 (55%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ ++C+ ++ + + + G+ P VV++N+L+ G + L+ L + M
Sbjct: 141 ILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQAS 200
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN +F +M+ L P TF +++G CKN D A
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLA 260
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + P+L+TYN LI GLCK G L+ A+ ++ E+ G P+ ITYTT++
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDG 320
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + E M ++ D Y +I+ + GR +A + +M++ G++L+
Sbjct: 321 SCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKLE 380
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I +Y +IN +CK+G + L+ EM++ G+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLMKEMQRDGY 412
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 146/284 (51%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + G+ P V S+N+LM+ +LG +
Sbjct: 129 ECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M + P T+++++NGLCK D+A +F + +G VP VT+ LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I K++ +P+ ITY T++ + K +++ M KG
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A +Y + M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
L EM G + + T+T++I+ CK G++ ++ M + G+
Sbjct: 369 LREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGY 412
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 128/272 (47%), Gaps = 31/272 (11%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
FNI+++ CK A +F + K G P +V++N L+ G K G L + +
Sbjct: 139 FNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
SG P+ TY+ ++ + K E+ M G +G + T+I K GR+
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A + +QM++ + D+++YNTLI CK+G L+ A L+DEM +G + DK T+T LI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF 343
DG CK G+++ A EY KI N+ RL D
Sbjct: 319 DGSCKEGDLETA---FEY-RKIMIKENI--------RL-------------------DDV 347
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
Y++++ LC+ R A K+L L G+++
Sbjct: 348 AYTALISGLCQEGRSVDAEKMLREMLSVGLKL 379
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 118/273 (43%), Gaps = 39/273 (14%)
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G+ L +NIL+ CK G +R A+ + + G P+ +++ T+M
Sbjct: 131 GYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMN----------- 179
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
++K+G L E M GVQ D+ +Y+ LIN
Sbjct: 180 ------------------------GYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLING 215
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
CKE K++ A L DEM G + T T LIDG CK G + A + M +
Sbjct: 216 LCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 275
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
L YN ++ L K G + A ++ + M +K D TY++++ CK L +A +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRK 335
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+K +R+ A A++ GL G +A+K+
Sbjct: 336 IMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 89/172 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ D I +M +SPD++TYN+LI G + L + DL+DEM G
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y +L+ + G + A + MI ++ + +++GLC+ + +A
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAE 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+M R + G E+ TY ++I CK G + T ++KE+ G+ P+ +T
Sbjct: 367 KMLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 180/370 (48%), Gaps = 43/370 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI A C+ + +L+ M + PD+ TYN+LI+ + + +L + D M
Sbjct: 205 VLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMERE 264
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD+ +YNSL+H + G+ EA R+F+++ D TP T+ +++G C+ D A
Sbjct: 265 GIKPDIVTYNSLIHGFCKEGRMREAMRLFKEI--RDATPNHVTYTTLIDGYCRLNDLDQA 322
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
LR+ ++ G P +VTYN +++ LC+ GR+R A +L E+ + P+ +T T+
Sbjct: 323 LRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTL--- 379
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
I A+ KIG +K A +MV G++LD
Sbjct: 380 --------------------------------INAYCKIGDMKSALKVKNRMVEAGLKLD 407
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHL 299
+Y LI+ +CK +++ A LL M GF T++ L+DG C N + +L
Sbjct: 408 QFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPD 467
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
E++ K G + Y ++ R K ++D+A +F M+ K DS Y+S+ + K
Sbjct: 468 EFVRK-GLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKL 526
Query: 356 KRLPSASKLL 365
+ +AS LL
Sbjct: 527 GKANAASDLL 536
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 168/360 (46%), Gaps = 9/360 (2%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS--YNSLMHCLFQLGKPDEANRVFQ 90
T SL+ LS +L ++ + PD+ S ++ L+ EA +VF+
Sbjct: 96 TAQSLLEKIAYRDFLSTQ-SVLSALVRLHDDPDINSHVFSWLVIVYANTKMKQEAIQVFE 154
Query: 91 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 150
M+ P ++LN L K+R TD ++++ + + G + YN+LI CK+G
Sbjct: 155 HMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSG 214
Query: 151 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
+ A +L E+ P+ TY T++ + + L + M+R+G D Y
Sbjct: 215 DVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYN 274
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
++I F K GR++EA ++ + D + V+Y TLI+ YC+ L+ A L +EME Q
Sbjct: 275 SLIHGFCKEGRMREAMRLFKE-IRDATP-NHVTYTTLIDGYCRLNDLDQALRLREEMEAQ 332
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
G T+ ++ LC+ G I+ A L M++ + + N +++ K G + A
Sbjct: 333 GLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSA 392
Query: 331 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+ V M D FTY +++H CK + + A +LLLS L +G +VDG
Sbjct: 393 LKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDG 452
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 135/302 (44%), Gaps = 33/302 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG-------------------AT 42
LI YC+ ++ +RM GI PD+VTYNSLI G AT
Sbjct: 241 LISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDAT 300
Query: 43 RNSL--------------LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
N + L +L L +EM G+ P V +YNS++ L ++G+ +AN++
Sbjct: 301 PNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKL 360
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
+M + P T N ++N CK +AL++ + + G + TY LI G CK
Sbjct: 361 LNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCK 420
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
+ A+ +L + D+G +P+ TY+ ++ + + L++ RKG D
Sbjct: 421 IREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSL 480
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y +I F K ++ A M G D V Y +L Y K GK AA LLDEM
Sbjct: 481 YRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMY 540
Query: 269 KQ 270
K+
Sbjct: 541 KR 542
>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
Group]
gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
Length = 618
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 186/368 (50%), Gaps = 10/368 (2%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M+EAG+ P++ TYN+L++ + + +L ++L+ G+ P+ + +L+ L Q +
Sbjct: 234 MKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANR 293
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
EA +F DM ++ P +N +++G ++ Y AL F+ + + G P+ T +I
Sbjct: 294 ITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSI 353
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
+++GLC G+++ A L+ + SG A NA Y ++ ++ L + M G
Sbjct: 354 VVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVG 413
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ Y ++I K G ++ A +MV GV+ ++V+Y LI+ + K G ++AA+
Sbjct: 414 VEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAF 473
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLE-----AYN 315
L EME++G + T ++L+DGLC+ ++ A R +EY + + N Y
Sbjct: 474 WLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYM 533
Query: 316 CIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++ L DG+ + A + F M V D FTY+ ++ LC + +A L +K
Sbjct: 534 TLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKV 593
Query: 372 GVRILKSA 379
GV+ K A
Sbjct: 594 GVKPTKCA 601
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 182/405 (44%), Gaps = 42/405 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ A Q D ++ R+RE P + N+++ G + +L+ +L DEML
Sbjct: 111 VLVIALSQMALPDEALSVFGRLREL---PALPACNAILDGLVKAHMLARVWELFDEMLGR 167
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK------- 113
G+ P V +YN+L++ G +A V+ M+ + P T+ M+ LC+
Sbjct: 168 GMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDA 227
Query: 114 --------------NRYTDNALR--------------MFRGLQKHGFVPELVTYNILIKG 145
N YT NAL + L K G VP V + LI G
Sbjct: 228 EGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDG 287
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LC+A R+ A+ I ++ AP Y +++ FR+ + L + RKG D
Sbjct: 288 LCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPD 347
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
F V+ G+++ AT ++E M G+ L+ +YN LI+ YCK G L+ A +
Sbjct: 348 EFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCT 407
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
M + G E + T++ LIDG K G ++ A M G + N+ Y ++ K+G
Sbjct: 408 RMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNG 467
Query: 326 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
+D A + + ME K ++ T S +V LC+ R+ A + ++
Sbjct: 468 DMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIM 512
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 137/311 (44%), Gaps = 6/311 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID CQ I M ++P V YNSLI GA R+ +L E++ G
Sbjct: 284 LIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKG 343
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD ++ + ++ L G+ A R + M + A +N++++ CK+ D AL
Sbjct: 344 LRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEAL 403
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P +VTY+ LI G K G + A I E+ G PN +TYT ++
Sbjct: 404 VTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGH 463
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM------EQMVTD 235
+N + M+ KG + ++ + R+++A ++ ++ +
Sbjct: 464 AKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKN 523
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
+ V+Y TLI +G+ A M G D++T+T++I GLC G + A
Sbjct: 524 PSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNA 583
Query: 296 RLHLEYMNKIG 306
+ M K+G
Sbjct: 584 MMLYADMVKVG 594
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 116/244 (47%), Gaps = 6/244 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ C L M+++GI+ + YN LI ++ L +L M E+
Sbjct: 353 IVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEV 412
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V +Y+SL+ + G+ + A ++ +M+ + P T+ +++G KN D A
Sbjct: 413 GVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAA 472
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGD--SGHAP---NAITY 174
+ + +++ G +T ++L+ GLC+ R++ A R+I++ G S P N++TY
Sbjct: 473 FWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTY 532
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
T++ + + +Y S M+ G D F Y VI +G + A MV
Sbjct: 533 MTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVK 592
Query: 235 DGVQ 238
GV+
Sbjct: 593 VGVK 596
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 41/211 (19%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID YC+ + D RM E G+ P+VVTY+SLI G ++N + ++ + EM+
Sbjct: 388 VLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAK 447
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V +Y +L+H + G D A + ++M + T +++++GLC+ +A
Sbjct: 448 GVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDA 507
Query: 121 LRM-----------------------------------------FRGLQKHGFVPELVTY 139
+R F ++ G VP+ TY
Sbjct: 508 VRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTY 567
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPN 170
++I+GLC G + A + ++ G P
Sbjct: 568 TLVIRGLCMLGYVLNAMMLYADMVKVGVKPT 598
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 126/312 (40%), Gaps = 42/312 (13%)
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
+++ L + D AL +F L++ +P L N ++ GL KA L + E
Sbjct: 107 PALGVLVIALSQMALPDEALSVFGRLRE---LPALPACNAILDGLVKAHMLARVWELFDE 163
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ G P+ +TY T++ C G
Sbjct: 164 MLGRGMVPSVVTYNTLINACRHQ-----------------------------------GD 188
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
+ +A + +QMV + ++V+Y T+I C+E + A L EM++ G + YT+
Sbjct: 189 VAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNA 248
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---E 338
L+ K NIK A + + K G N + ++D L + +I A N+F M E
Sbjct: 249 LMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYE 308
Query: 339 VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
V + Y+S++H ++ A ++ G+R + VV GL G + A
Sbjct: 309 VAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVAT 368
Query: 398 KIQSKIRMAKIS 409
+ ++ + I+
Sbjct: 369 RFLEVMQQSGIA 380
>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
Length = 671
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 179/391 (45%), Gaps = 9/391 (2%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L M G S D T ++ + MLE G PP+V +Y + + L
Sbjct: 203 LLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLC 262
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG-FVPEL 136
+ +A V ++M+ L P T +++GLCK +T+ A R+F L K + P +
Sbjct: 263 KRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNV 322
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
TY ++I G C+ G+L A +L + + G PN TYTT++ + + E+++
Sbjct: 323 HTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNK 382
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
MK++G+ + + Y VI F K G+++EA + + G++ D ++Y LI +CK+G
Sbjct: 383 MKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGH 442
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+ A L D M + G D +T LI C+ ++ ++ + IG + Y
Sbjct: 443 ITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTS 502
Query: 317 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++ K G+ A+ VFE M DS TY +++ LCK RL A L L
Sbjct: 503 MIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDK- 561
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
R++ V L CRRE I +
Sbjct: 562 -RLVPCEVTRVT--LTFEYCRREKTSIAVSV 589
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 177/396 (44%), Gaps = 9/396 (2%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
SF + + M AG+ PD ++ +L+ R + LL M G D +
Sbjct: 161 SFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCT 220
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
++ L + G+ + + F+ M+ P + ++GLCK RY A + +
Sbjct: 221 VVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGR 280
Query: 131 GFVPELVTYNILIKGLCKAGRL-RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G P + T+ LI GLCK G R R LK + S + PN TYT ++ R K
Sbjct: 281 GLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLAR 340
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+L M +G + Y T+I K G A + M +M +G +I +YN +I+
Sbjct: 341 AEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVID 400
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
+CK+GK++ AY +L QG + DK T+TILI CK G+I A + M + G
Sbjct: 401 GFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCP 460
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFES------MEVKDSFTYSSMVHNLCKAKRLPSASK 363
++EAY ++ + +++ + F+ + K TY+SM+ CK R A +
Sbjct: 461 DIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQ--TYTSMIAGYCKVGRSTLALR 518
Query: 364 LLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ +++G A++ GL EAK +
Sbjct: 519 VFERMVQNGCFADSITYGALISGLCKESRLEEAKAL 554
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 159/338 (47%), Gaps = 1/338 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ + C+ F RM E G P+VV Y + I G + + + +L+EM+
Sbjct: 221 VVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGR 280
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDN 119
G+ P+V+++ +L+ L ++G + A R+F +I P T+ +M+ G C+
Sbjct: 281 GLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLAR 340
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + + + G P TY LI G CK G A ++ ++ G PN TY ++
Sbjct: 341 AEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVID 400
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ K + ++L +G FD Y +I K G + A D ++MV +G
Sbjct: 401 GFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCP 460
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DI +Y +LI+ YC++ ++E + D+ G K T+T +I G CK G A
Sbjct: 461 DIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVF 520
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
E M + G ++ Y ++ L K+ +++ A ++E M
Sbjct: 521 ERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGM 558
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 156/341 (45%), Gaps = 5/341 (1%)
Query: 37 LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 96
++A L + D++ EM G+P V + N ++ + G A +VF M
Sbjct: 117 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 176
Query: 97 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 156
+ P +F ++ C+ + + + ++GF + T ++++ LC+ GR +
Sbjct: 177 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 236
Query: 157 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 216
+ + ++G PN + YT + + R K +L M +G + + + T+I
Sbjct: 237 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 296
Query: 217 VKIGRLKEATD-YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
KIG + A +++ + + + ++ +Y +I YC+EGKL A +LL M +QG + +
Sbjct: 297 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 356
Query: 276 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
T+T LI G CK G+ A + M + GF N+ YN ++D K GKI A V
Sbjct: 357 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 416
Query: 336 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
+ D TY+ ++ CK + A L +++G
Sbjct: 417 MATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENG 457
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 142/293 (48%), Gaps = 8/293 (2%)
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A M ++ HG + T N +++ + G AR + + +G P+ ++ ++
Sbjct: 129 EAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALV 188
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
C R K + +L+AM R G++ D V+ + + GR K+ +++ +M+ G
Sbjct: 189 VVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTP 248
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RL 297
++V+Y I+ CK ++ A+ +L+EM +G + + YTHT LIDGLCK G + A RL
Sbjct: 249 PNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRL 308
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHNLC 353
L+ + + N+ Y ++ ++GK+ A + + E ++ TY++++ C
Sbjct: 309 FLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHC 368
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
K A +L+ + G AV+DG G +EA K+ +RMA
Sbjct: 369 KGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKV---LRMA 418
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG----------------ATRNS 45
LI +C+ SFD + ++N+M++ G P++ TYN++I G AT
Sbjct: 363 LIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQG 422
Query: 46 L-------------------LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
L ++ +LDL D M+E G PD+ +Y SL+ Q + +E+
Sbjct: 423 LKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQ 482
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ F + L P T+ M+ G CK + ALR+F + ++G + +TY LI GL
Sbjct: 483 KFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGL 542
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM--KRKGYTF 204
CK RL A+ + + + D P +T T+ R K + + +L + +++ +T
Sbjct: 543 CKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQVHTV 602
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D V+ +G + A+ ++++++ + +D +Y IN C E Y L
Sbjct: 603 D-----VVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFIN-SCYENN---RYALA 653
Query: 265 DEMEKQ 270
EM ++
Sbjct: 654 SEMSEK 659
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 3/203 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI YCQ + ++ G+ P TY S+IAG + + +L + + M++ G
Sbjct: 468 LISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNG 527
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
D +Y +L+ L + + +EA +++ M+ L PC T + C+ T A+
Sbjct: 528 CFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAV 587
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L K ++ T +++++ L G + A LK++ D +A + TYT + C
Sbjct: 588 SVLDRLDKR---QQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSC 644
Query: 182 FRNRKYKLGLEILSAMKRKGYTF 204
+ N +Y L E+ +K +F
Sbjct: 645 YENNRYALASEMSEKFSKKISSF 667
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 84/222 (37%), Gaps = 59/222 (26%)
Query: 209 YCTVIAAFV--------------------KIGRLKEATDYMEQMVTDGVQL--------- 239
Y T AFV + GRL EA D + +M + G+ L
Sbjct: 94 YVTAATAFVARGSLPMAHEVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVL 153
Query: 240 --------------------------DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
D S+ L+ + C+EGK+E LL M + GF
Sbjct: 154 RVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFS 213
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
D T T+++ LC+ G K M + G N+ Y +D L K + A +V
Sbjct: 214 LDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHV 273
Query: 334 FESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
E M + + +T+++++ LCK A +L L +KS
Sbjct: 274 LEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKS 315
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 195/448 (43%), Gaps = 40/448 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+DA C+ D + RM E+ ++P +VT+ LI G R+ LL EM +
Sbjct: 271 LLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGL 330
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+ N L+ + G EA R+F +M+ ++ T+N++ LCK + A
Sbjct: 331 GITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERA 390
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLC-KAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
R+ + G +N ++ GL + GRL + ++ E+ G PN T K
Sbjct: 391 ERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTK 450
Query: 180 --CCFRNRKYKLGL---------------------------------EILSAMKRKGYTF 204
C R + +G+ E+L M KG
Sbjct: 451 QLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMEL 510
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D Y +I K +++EA + M+ G + D +N++I+ YC GK+E A LL
Sbjct: 511 DNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLL 570
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
+M+ +G + D ++ +IDG CKA +I+ A +L + G N YN ++ G++
Sbjct: 571 GQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRN 630
Query: 325 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
G I AI V ++ME + TY S++H +C A + A + K+ + +
Sbjct: 631 GNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGY 690
Query: 381 KAVVDGLRHSGCRREAKKIQSKIRMAKI 408
++ GL G EA ++R I
Sbjct: 691 TIMIQGLCKIGKMDEAMNYFEEMRSRSI 718
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 182/378 (48%), Gaps = 5/378 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGA-TRNSLLSCSLDLLDEMLE 59
++ A C+ + IL M G++ +NS++AG R L + L+ EM++
Sbjct: 376 LIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVK 435
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G+ P+ + L Q + EA ++ M+ L AT N +++GLC+ +
Sbjct: 436 RGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKG 495
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + R + G + +TYNI+I+G CK ++ A + ++ G P+A + +I+
Sbjct: 496 ATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIH 555
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
K + L +L MK +G D Y T+I + K +++A +Y+ +++ G++
Sbjct: 556 AYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKP 615
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ V YN LI Y + G + A +LD ME G + T+ L+ +C AG + A+
Sbjct: 616 NAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMF 675
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
E K + + Y ++ L K GK+D A+N FE M + + TY+++++ CK+
Sbjct: 676 EQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKS 735
Query: 356 KRLPSASKLLLSCLKSGV 373
ASKL + SG+
Sbjct: 736 GNNEEASKLFDEMVSSGI 753
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 181/402 (45%), Gaps = 43/402 (10%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE-MGIPPDVWSYNSLMHCLFQLGKPDEAN 86
SP V T N+L+ R L + + DEM + + P+ +SY S++ L ++GK D+
Sbjct: 190 SPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGF 249
Query: 87 RVFQDMICGDL--TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
++ D+I L + +N++++ LCK+ D A+R+ +++ P +VT+ ILI
Sbjct: 250 KILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILIN 309
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
GL ++ R +L+E+ G PN + ++ R + + + M K
Sbjct: 310 GLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKS 369
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI-NLYCKEGKLEAAYLL 263
Y + A K G ++ A +E+M++ G+ + +N+++ L + G+LE+ L
Sbjct: 370 TAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRL 429
Query: 264 LDEMEKQGFE--------CDKY---------------------------THTILIDGLCK 288
+ EM K+G + C K T LI GLC+
Sbjct: 430 ISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCE 489
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 344
N+KGA L M G + + YN ++ KD KI+ A+ + + M K D++
Sbjct: 490 GKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYM 549
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
++S++H C ++ A LL GV+ + ++DG
Sbjct: 550 FNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDG 591
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 157/346 (45%), Gaps = 2/346 (0%)
Query: 7 CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
CQ I +M E G+ ++ T N+LI G + + ++L M+ G+ D
Sbjct: 453 CQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDN 512
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
+YN ++ + K +EA ++ DMI P FN +++ C + AL +
Sbjct: 513 ITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQ 572
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
++ G P++V+Y +I G CKA ++ A L EL G PNA+ Y ++ RN
Sbjct: 573 MKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGN 632
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
+ +L M+ G YC+++ G + EA EQ + +++ +V Y
Sbjct: 633 ISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTI 692
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
+I CK GK++ A +EM + +K T+T L+ CK+GN + A + M G
Sbjct: 693 MIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSG 752
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
+ +YN +V + +D AI ++ E+ T + + N+
Sbjct: 753 IVPDNVSYNTLVTGFSQVDSLDKAIE--KAAEISSIMTQNDCLDNV 796
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 87/177 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID YC+ LN + G+ P+ V YN+LI G RN +S ++ +LD M +G
Sbjct: 588 IIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIG 647
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P +Y SLMH + G DEA +F+ + + IM+ GLCK D A+
Sbjct: 648 IQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAM 707
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
F ++ P +TY L+ CK+G A + E+ SG P+ ++Y T++
Sbjct: 708 NYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLV 764
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 121/256 (47%), Gaps = 3/256 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I AYC + +L +M+ G+ PDVV+Y ++I G + + + + L+E++ G
Sbjct: 553 IIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACG 612
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ YN+L+ + G A V M + P T+ +++ +C D A
Sbjct: 613 LKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAK 672
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
MF +K+ +V Y I+I+GLCK G++ A +E+ PN ITYTT+M
Sbjct: 673 TMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAY 732
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ--- 238
++ + ++ M G D Y T++ F ++ L +A + ++ + Q
Sbjct: 733 CKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAEISSIMTQNDC 792
Query: 239 LDIVSYNTLINLYCKE 254
LD V N + +C++
Sbjct: 793 LDNVLVNRITTPWCEK 808
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 159/353 (45%), Gaps = 17/353 (4%)
Query: 35 NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI- 93
N+ + + R SL ++D + P V + N+L+ L + G +VF +M
Sbjct: 163 NTCVTSSARGSL-RLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRD 221
Query: 94 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL------QKHGFVPELVTYNILIKGLC 147
C +TP ++ M+ LCK D+ ++ L Q G VP YN+L+ LC
Sbjct: 222 CKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVP----YNLLMDALC 277
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K+GR+ A + + +S AP+ +T+ ++ R+ ++ +L M+ G T +
Sbjct: 278 KSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEV 337
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
+I + G EA ++MV+ ++ V+YN + CKEG++E A +L+EM
Sbjct: 338 ICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEM 397
Query: 268 EKQGFECDKYTHTILIDGLC-KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
G ++ GL + G ++ + M K G N +L + +
Sbjct: 398 LSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRR 457
Query: 327 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
A+ ++ M K + T ++++H LC+ K + A+++L + + G+ +
Sbjct: 458 HQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMEL 510
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 118/260 (45%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I C+ + + + M G PD +NS+I + +L LL +M
Sbjct: 517 IMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIE 576
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV SY +++ + +AN +++ L P +N ++ G +N A
Sbjct: 577 GVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGA 636
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + ++ G P VTY L+ +C AG + A+ + ++ + + YT +++
Sbjct: 637 IGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQG 696
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + M+ + + Y T++ A+ K G +EA+ ++MV+ G+ D
Sbjct: 697 LCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPD 756
Query: 241 IVSYNTLINLYCKEGKLEAA 260
VSYNTL+ + + L+ A
Sbjct: 757 NVSYNTLVTGFSQVDSLDKA 776
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 192/394 (48%), Gaps = 6/394 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC--SLDLLDEMLE 59
++ Y + FD +L+ M + GI PD+V++N+LI +++ L+ +LDLL E+ +
Sbjct: 227 MMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQ 286
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G+ PDV +YN+L+ Q ++A VF+DMI + P T+N M++ + +
Sbjct: 287 SGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEE 346
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A R+FR L + GF+P+ +TYN L+ K G + ++L +G N ITY T++
Sbjct: 347 AERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIH 406
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + L + + M+ G T D Y +I + K+ R+ EA +E M G++
Sbjct: 407 MYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKP 466
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+++++ LI Y K G+ A D M G + D+ + +++D ++G+ +
Sbjct: 467 TLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLY 526
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLP 359
M + + + Y ++ L K+ K + V + ME+ + L KA+ +
Sbjct: 527 RKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMELLCRMNLGIISTMLIKARCVS 586
Query: 360 SASKLL----LSCLKSGVRILKSAQKAVVDGLRH 389
+KLL L K ++ L+S A V +H
Sbjct: 587 QGAKLLKKACLQGYKPDIKSLRSIMNAYVMTEKH 620
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/379 (20%), Positives = 161/379 (42%), Gaps = 9/379 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREA-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
++I+AY + + ++ +R+A GI D +N+LI + L + + D M++
Sbjct: 751 IIIEAYGKIKLWQQAEILVKGLRQASGI--DRRIWNALIHAYAESGLYEKARAVFDNMIK 808
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G P V S N +M L G+ DE V +++ + +T ++L+ K
Sbjct: 809 TGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFE 868
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
++++ G++ G++P + Y +I LC R R ++ E+ +G P+ ++
Sbjct: 869 VMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLN 928
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ ++ ++ G D Y T+I + + R +E + +M G+
Sbjct: 929 MYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTP 988
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ SY +L+ K E A + +EM + ++ ++ + +++ AGN A L
Sbjct: 989 KLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLL 1048
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF-----ESMEVKDSFTYSSMVHNLCK 354
M + G + + + ++ G G+ A NV S+EV + YS++ K
Sbjct: 1049 AVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVS-TLPYSTVFDAYLK 1107
Query: 355 AKRLPSASKLLLSCLKSGV 373
+ LL + GV
Sbjct: 1108 NGDYNHGTTKLLEMKRDGV 1126
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 129/308 (41%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+DA+ + I N M+ AG P++ Y S+I+ ++ ++ EM
Sbjct: 855 LLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGA 914
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ N+L++ G D +V++ ++ L P T+N ++ C++ +
Sbjct: 915 GFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEG 974
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K G P+L +Y L+ KA A I +E+ + N Y +MK
Sbjct: 975 FTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKI 1034
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ +L+ MK G ++ ++ G+ +EA + + + + +++
Sbjct: 1035 YRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVS 1094
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ Y+T+ + Y K G L EM++ G E D T I A L L+
Sbjct: 1095 TLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLK 1154
Query: 301 YMNKIGFD 308
+ GFD
Sbjct: 1155 SLQDCGFD 1162
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 107/262 (40%)
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
M G P++ Y S++ L + + + +M P A N +LN
Sbjct: 876 MKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGN 935
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
D +++R + + G P+ TYN LI C++ R +L E+G G P +Y +
Sbjct: 936 FDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKS 995
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ + + +I M+ K Y + Y ++ + G +A + + M DG
Sbjct: 996 LLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDG 1055
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
++ I + + L+ Y G+ A +L+ ++ E ++ + D K G+
Sbjct: 1056 IEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGT 1115
Query: 297 LHLEYMNKIGFDSNLEAYNCIV 318
L M + G + + + + C +
Sbjct: 1116 TKLLEMKRDGVEPDHQVWTCFI 1137
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/407 (19%), Positives = 172/407 (42%), Gaps = 16/407 (3%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + M+ GI Y S+I+ + + L+D+ L+ GIP ++ S
Sbjct: 691 FSEACQVFCDMQFIGIEASKSIYESIISTYCKLGFPETAHRLMDDALQSGIPLNILSCRV 750
Query: 72 LMHCLFQLGKPDEANRVFQ--DMICGDLTPCTAT----FNIMLNGLCKNRYTDNALRMFR 125
++ + GK +++Q +++ L + +N +++ ++ + A +F
Sbjct: 751 II--IEAYGKI----KLWQQAEILVKGLRQASGIDRRIWNALIHAYAESGLYEKARAVFD 804
Query: 126 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 185
+ K G +P + + N +++ L GRL +++EL D + T ++ +
Sbjct: 805 NMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAG 864
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
++I + MK GY + Y ++I+ R ++ + +M G + D+ N
Sbjct: 865 DVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILN 924
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
L+N+Y G + + + + G E D+ T+ LI C++ + L M K
Sbjct: 925 ALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKR 984
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLP---SAS 362
G L++Y ++ K + A +FE M K S+ H + K R S +
Sbjct: 985 GLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKA 1044
Query: 363 KLLLSCLKS-GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+ LL+ +K G+ + ++ +G REA+ + + ++ + +
Sbjct: 1045 ENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSL 1091
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 133/340 (39%), Gaps = 39/340 (11%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
+ ++ L + + A ++F +Q G Y +I CK G TA ++ +
Sbjct: 678 YEYLITCLIEAEFFSEACQVFCDMQFIGIEASKSIYESIISTYCKLGFPETAHRLMDDAL 737
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
SG N ++ I+ + K EIL R+ D + +I A+ + G +
Sbjct: 738 QSGIPLNILSCRVIIIEAYGKIKLWQQAEILVKGLRQASGIDRRIWNALIHAYAESGLYE 797
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
+A + M+ G + S N ++ +G+L+ Y++++E++ F+ K T +L+
Sbjct: 798 KARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLL 857
Query: 284 DGLCKAGNI-----------------------------------KGARLHLEYMNKIGFD 308
D KAG++ + L + M GF
Sbjct: 858 DAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFK 917
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFES-MEV---KDSFTYSSMVHNLCKAKRLPSASKL 364
+L N +++ G D V+ S +E D TY++++ C++ R L
Sbjct: 918 PDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTL 977
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
L K G+ + K+++ + R +A +I ++R
Sbjct: 978 LNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMR 1017
>gi|302143623|emb|CBI22376.3| unnamed protein product [Vitis vinifera]
Length = 554
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 175/367 (47%), Gaps = 4/367 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + S + +L M +G PD++TYN L+ G + LL +++LLDEM G
Sbjct: 171 LIRGLIKLESTERATRVLKIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSG 230
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PPD +YN+++ C+F G D+A ++D + T+ +++ +CK+ T A+
Sbjct: 231 CPPDAITYNTILRCMFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAM 290
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P++VTYN L+ CK G+ I+ L G PN +TY T++
Sbjct: 291 EVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSL 350
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + EIL M Y +I K G L A ++ +QMV+ DI
Sbjct: 351 CTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDI 410
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YNTL+ CKEG ++ A LL + T+ I+IDGL K G ++ A
Sbjct: 411 ITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGE 470
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS----MVHNLCKAKR 357
M + GF + + + L + ++ A+ + + M ++ +S ++H LC A
Sbjct: 471 MIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCAAGM 530
Query: 358 LPSASKL 364
+ A++L
Sbjct: 531 IEEANQL 537
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 164/343 (47%), Gaps = 4/343 (1%)
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 124
D + N ++ L GK A+R+ M + P + ++ GL K T+ A R+
Sbjct: 129 DEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVL 188
Query: 125 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
+ + G +P+++TYN+L+ GLCK G L+TA +L E+ SG P+AITY TI++C F +
Sbjct: 189 KIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDH 248
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
+ + RKG Y +I K +A + +E M +G DIV+Y
Sbjct: 249 GGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTY 308
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
N+L+N CK+GK E L++ + G + T+ L+ LC G L MN
Sbjct: 309 NSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNT 368
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPS 360
+ YN +++ L K G +D AIN F+ M + D TY++++ LCK +
Sbjct: 369 TSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDE 428
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A LL S + V+DGL GC +A ++ ++
Sbjct: 429 ALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEM 471
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 125/260 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ +L M G PD+VTYNSL+ + + ++ +L
Sbjct: 275 VLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSH 334
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ +YN+L+H L G DE + + M P T+NI++NGLCK D A
Sbjct: 335 GMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKYGLLDRA 394
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ F + H +P+++TYN L+ LCK G + A +L L D+ +P ITY ++
Sbjct: 395 INFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDG 454
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + +E+ M +G+ D + T+ ++ +++A +++M ++
Sbjct: 455 LAKKGCMEKAMELYGEMIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIK 514
Query: 241 IVSYNTLINLYCKEGKLEAA 260
++ +I+ C G +E A
Sbjct: 515 NSAFRFVIHGLCAAGMIEEA 534
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 79/164 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C++ D ++M PD++TYN+L+A + ++ +L LL + +
Sbjct: 380 ILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDT 439
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P + +YN ++ L + G ++A ++ +MI P T + GL + ++A
Sbjct: 440 RCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRTLFWGLFRLDLVEDA 499
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 164
L + + + K + + +I GLC AG + A + ++L +
Sbjct: 500 LVILKEMNKRNQRIKNSAFRFVIHGLCAAGMIEEANQLHQKLTE 543
>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 418
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 145/271 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV++N+L++G R L L M
Sbjct: 141 ILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMHAS 200
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K DEAN +F +M+ L P TF +++G CKN D A
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLA 260
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ L GF P+L+TYN LI GLCK G L+ AR ++ E+ P+ ITYTT++
Sbjct: 261 MEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDG 320
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + E M ++ D Y +I+ + GR +A + M++ G++ D
Sbjct: 321 SCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPD 380
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+Y +IN +CK+G ++ LL EM + G
Sbjct: 381 NGTYTMIINEFCKKGDVKTGSKLLKEMXRDG 411
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 141/282 (50%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
E+LE G P ++ +N LMH + G+ A VF + L P +FN +++G +
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLG 185
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D R+ + G P++ TY++LI GLCK ++ A + E+ D+G PN +T+T
Sbjct: 186 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFT 245
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T++ +N + L +EI + +G++ D Y T+I K G LK+A D +++M
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMK 305
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
++ D ++Y TLI+ CKEG LE A+ M K+ D +T LI GLC+ G A
Sbjct: 306 ELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
L M +G + Y I++ K G + + + M
Sbjct: 366 EKMLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEM 407
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 144/283 (50%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + G+ P V S+N+LM +LG D
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLD 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M + P T+++++NGLCK D A +F + +G VP VT+ LI
Sbjct: 189 EGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I K+L G +P+ ITY T++ + K +++ M K
Sbjct: 249 DGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A +Y ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
L M G + D T+T++I+ CK G++K L+ M + G
Sbjct: 369 LRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXRDG 411
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 133/272 (48%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y ++ + + G+ L +NIL+ CK G +R A+ + + G
Sbjct: 107 VLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWG 166
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ +++ T+M R G + SAM G D + Y +I K ++ EA
Sbjct: 167 LRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAN 226
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ +M+ +G+ + V++ TLI+ +CK G+++ A + ++ QGF D T+ LI GL
Sbjct: 227 ELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGL 286
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K AR ++ M+ + Y ++D K+G ++ A + M + D
Sbjct: 287 CKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 347 VAYTALISGLCQEGRSVDAEKMLRGMLSVGLK 378
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 153/335 (45%), Gaps = 6/335 (1%)
Query: 71 SLMHCLFQLGKPDEANRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
SL+ + D A+ VF ++ G F+ ++ ++ + +A+ FR +
Sbjct: 34 SLIQIVVSRKGKDSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFIRDAIEFFRLTR 93
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
+H F T +++ L K + KE+ + G+ + + +M + + +
Sbjct: 94 EHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMR 153
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
L + A+ + G + T+++ ++++G L E M GVQ D+ +Y+ LI
Sbjct: 154 LAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLI 213
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
N CKE K++ A L +EM G + T T LIDG CK G + A + + GF
Sbjct: 214 NGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFS 273
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
+L YN ++ L K G + A ++ + M +K D TY++++ CK L +A +
Sbjct: 274 PDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGDLETAFEY 333
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+K +R+ A A++ GL G +A+K+
Sbjct: 334 RKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 100/202 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ D + N M + G+ P+ VT+ +LI G +N + ++++ ++L
Sbjct: 211 VLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQ 270
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN+L+ L + G +A + +M +L P T+ +++G CK + A
Sbjct: 271 GFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGDLETA 330
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K + V Y LI GLC+ GR A +L+ + G P+ TYT I+
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPDNGTYTMIINE 390
Query: 181 CFRNRKYKLGLEILSAMKRKGY 202
+ K G ++L M R G+
Sbjct: 391 FCKKGDVKTGSKLLKEMXRDGH 412
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 89/172 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ D I ++ G SPD++TYN+LI G + L + DL+DEM
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKE 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y +L+ + G + A + MI ++ + +++GLC+ + +A
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+M RG+ G P+ TY ++I CK G ++T +LKE+ GH P +T
Sbjct: 367 KMLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXRDGHVPCVVT 418
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 164/327 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++IDA+C+ D ++LN M++ I PD++TY SLI G + S L EM+ +
Sbjct: 218 IVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHL 277
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PDV ++NS++ L + GK ++A + MI + P T+N++++G C A
Sbjct: 278 NIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRA 337
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R+F + G P++++Y LI G + ++ A + +E+ +G P+ +T + +++
Sbjct: 338 RRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRG 397
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F + + M+ G+ + + +CT++ + K G ++EA + ++ +
Sbjct: 398 LFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTN 457
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I Y +IN CK GKL+ A+ +++ G D T+T +I G C+ G + A+ L
Sbjct: 458 IQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLR 517
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKI 327
M G + YN IV + K+
Sbjct: 518 KMEDNGCLPDNRTYNVIVRGFFRSSKV 544
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 180/368 (48%), Gaps = 4/368 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D C+ + +L M + PD YN +I ++ +L + LL+EM +
Sbjct: 184 VMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKN 243
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
IPPD+ +Y SL+ L +L + ++ +F +MI ++ P TFN +++GLCK ++A
Sbjct: 244 IPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAE 303
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P +TYN+++ G C G++ AR I + D G P+ I+YT ++
Sbjct: 304 EIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGY 363
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+K +++ + + G ++ ++GR + A + ++M G ++
Sbjct: 364 VEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNL 423
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++ TL+ Y K G +E A ++E++ + + +T +I+GLCK G + A E
Sbjct: 424 YTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEK 483
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
+ IG ++ Y ++ ++G +D A ++ ME + D+ TY+ +V ++ +
Sbjct: 484 LPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSK 543
Query: 358 LPSASKLL 365
+ L
Sbjct: 544 VSEMKAFL 551
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 191/442 (43%), Gaps = 40/442 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++++ C D G+++L + GI + VT+ +LI G + + ++ L +++
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172
Query: 62 I-PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PD Y ++M L + G +A + + M G P T +NI+++ CK+ D A
Sbjct: 173 ICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGA 232
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ P+++TY LI GL K + R + E+ P+ T+ +++
Sbjct: 233 TSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDG 292
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + EI++ M KG + Y V+ + G++ A + M+ G++ D
Sbjct: 293 LCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPD 352
Query: 241 IVSYNTLINLYCKE-----------------------------------GKLEAAYLLLD 265
I+SY LIN Y ++ G+ E A + D
Sbjct: 353 IISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFD 412
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM+ G + YTH L+ G K G ++ A H + + D+N++ Y +++ L K+G
Sbjct: 413 EMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNG 472
Query: 326 KIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
K+D A FE + + D TY++M+ C+ L A +L +G
Sbjct: 473 KLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYN 532
Query: 382 AVVDGLRHSGCRREAKKIQSKI 403
+V G S E K +I
Sbjct: 533 VIVRGFFRSSKVSEMKAFLKEI 554
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 135/287 (47%), Gaps = 5/287 (1%)
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
D+A +FR + +P V+++ L+K L + I +E+ +A +T+
Sbjct: 54 DDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTV 113
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ C + LG +L+ +KG ++ + T+I ++K+A +++V + +
Sbjct: 114 VNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENI 173
Query: 238 -QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
+ D V Y T+++ CK+G + A+ LL ME+ + D + I+ID CK G + GA
Sbjct: 174 CEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGAT 233
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNL 352
L M + ++ Y ++D LGK + + +F M D T++S++ L
Sbjct: 234 SLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGL 293
Query: 353 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
CK ++ A +++ ++ GV + V+DG G A++I
Sbjct: 294 CKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRI 340
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 106/241 (43%), Gaps = 35/241 (14%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D YC I + M + GI PD+++Y +LI G + ++ L E+ +
Sbjct: 323 VVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQN 382
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTP-----CT-------------- 101
G+ P + + + L+ LF++G+ + A F +M P CT
Sbjct: 383 GLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEA 442
Query: 102 ----------------ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+ ++NGLCKN D A F L G P+++TY +I G
Sbjct: 443 MSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISG 502
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
C+ G L A+ +L+++ D+G P+ TY I++ FR+ K L + K ++F+
Sbjct: 503 YCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFE 562
Query: 206 G 206
Sbjct: 563 A 563
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 87/172 (50%), Gaps = 5/172 (2%)
Query: 12 FDAGYT-----ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 66
F+ G T + M+ AG P++ T+ +L+ G +N L+ ++ ++ ++
Sbjct: 399 FEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNI 458
Query: 67 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
Y ++++ L + GK D+A+ F+ + L P T+ M++G C+ D A M R
Sbjct: 459 QIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRK 518
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
++ +G +P+ TYN++++G ++ ++ + LKE+ + A T +M
Sbjct: 519 MEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLM 570
>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
[Coelocarpum swinglei]
Length = 429
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 152/285 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV++N+L+ G R L L M
Sbjct: 145 ILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHAS 204
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN +F +M+ L P TF +++G CKN D A
Sbjct: 205 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLA 264
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + P+L+TYN LI GLCK G L+ A+ ++ E+ G P+ I+YTT++
Sbjct: 265 MEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDG 324
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C + + E M ++ D Y +I+ + GR +A + +M++ G++ D
Sbjct: 325 CCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPD 384
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+Y +IN +CK+G + LL EM++ G T+ +L++G
Sbjct: 385 TGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 429
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 146/297 (49%), Gaps = 1/297 (0%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
E+LE G P ++ +N LMH + G A VF + L P +FN ++NG +
Sbjct: 130 EILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLG 189
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D R+ + G P++ TY++LI GLCK ++ A + E+ D G PN +T+T
Sbjct: 190 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFT 249
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T++ +N + L +E+ M + + D Y T+I K G LK+A D +++M
Sbjct: 250 TLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMK 309
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G++ D +SY TLI+ CKEG LE A+ M ++ D +T LI GLC+ G A
Sbjct: 310 GLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDA 369
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 352
L M +G + Y I++ K G + + + M+ +D S + +N+
Sbjct: 370 EKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQ-RDGHVPSVVTYNV 425
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 156/308 (50%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F + + E G + +N L+ + + +L + D + + G+ P V S+N+
Sbjct: 121 FKLVWXFYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNT 180
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
LM+ +LG DE R+ M + P T+++++NGLCK D+A +F + G
Sbjct: 181 LMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKG 240
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
VP VT+ LI G CK GR+ A + K++ +P+ ITY T++ + K
Sbjct: 241 LVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQ 300
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+++ M+ KG D Y T+I K G L+ A ++ ++M+ + ++LD V+Y LI+
Sbjct: 301 DLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGL 360
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
C+EG+ A +L EM G D T+T++I+ CK G++ L+ M + G ++
Sbjct: 361 CQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSV 420
Query: 312 EAYNCIVD 319
YN +++
Sbjct: 421 VTYNVLMN 428
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 131/272 (48%), Gaps = 4/272 (1%)
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
+L L K +Y ++ + + G+ L +NIL+ CK G +R A + + G
Sbjct: 111 VLEHLMKLKYFKLVWXFYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWG 170
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
P+ +++ T+M R G + SAM G D + Y +I K ++ +A
Sbjct: 171 LRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDAN 230
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+ ++M+ G+ + V++ TLI+ +CK G+++ A + +M Q D T+ LI GL
Sbjct: 231 ELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGL 290
Query: 287 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 342
CK G++K A+ ++ M G + +Y ++D K+G ++ A + M + D
Sbjct: 291 CKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDD 350
Query: 343 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G+R
Sbjct: 351 VAYTALISGLCQEGRSIDAEKMLREMLSVGLR 382
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 139/300 (46%), Gaps = 4/300 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F+ ++ ++ + +A+ +R ++H F T +++ L K + KE+
Sbjct: 73 FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWXFYKEIL 132
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+ G+ + + +M + ++ L + A+ + G + T++ ++++G L
Sbjct: 133 ECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLD 192
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
E M GVQ D+ +Y+ LIN CKE K++ A L DEM +G + T T LI
Sbjct: 193 EGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLI 252
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
DG CK G + A + M +L YN ++ L K G + A ++ + M +K
Sbjct: 253 DGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLK 312
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D +Y++++ CK L +A + ++ +R+ A A++ GL G +A+K+
Sbjct: 313 PDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKM 372
>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
Length = 332
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 157/310 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ + + D Y+ N M + ISP+VVTYNS+IA + + ++++L M++ G
Sbjct: 18 VINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 77
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +YNS++H G+P EA + M + P T+N +++ LCKN A
Sbjct: 78 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 137
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + K G P++ TY L++G G L +L + +G PN ++ ++
Sbjct: 138 KIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 197
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + + + S M+++G + Y TVI K GR+++A Y EQM+ +G++ D
Sbjct: 198 AKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDS 257
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ YN+LI+ C K E A L EM +G +ID CK G + + +
Sbjct: 258 IVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESVKLFDL 317
Query: 302 MNKIGFDSNL 311
M +IG ++
Sbjct: 318 MVRIGVKPDI 327
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 164/316 (51%), Gaps = 4/316 (1%)
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
PPDV SY+++++ F+ G D+ + +M+ ++P T+N ++ LCK + D A+
Sbjct: 9 PPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAME 68
Query: 123 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ + K G +P+ +TYN ++ G C +G+ + A LK++ G P+ +TY ++M
Sbjct: 69 VLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLC 128
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
+N + +I +M ++G D Y T++ + G L E ++ MV +G+ +
Sbjct: 129 KNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 188
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
++ L+ Y K+ K+E A L+ +M +QG + T+ +ID LCK+G ++ A L+ E M
Sbjct: 189 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQM 248
Query: 303 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 358
G + YN ++ L K + A +F M + + ++S++ + CK R+
Sbjct: 249 IDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRV 308
Query: 359 PSASKLLLSCLKSGVR 374
+ KL ++ GV+
Sbjct: 309 IESVKLFDLMVRIGVK 324
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 156/310 (50%), Gaps = 2/310 (0%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
PDVV+Y+++I G + L + +EML+ I P+V +YNS++ L + D+A V
Sbjct: 10 PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEV 69
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
M+ + P T+N +++G C + A+ + ++ G P++VTYN L+ LCK
Sbjct: 70 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 129
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
GR AR I + G P+ TY T+++ +L M R G + +
Sbjct: 130 NGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 189
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
+ ++ A+ K +++EA +M G+ + V+Y T+I++ CK G++E A L ++M
Sbjct: 190 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMI 249
Query: 269 KQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
+G D + LI LC K L LE +++ G + +N I+D K+G++
Sbjct: 250 DEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDR-GICLSTIFFNSIIDSHCKEGRV 308
Query: 328 DHAINVFESM 337
++ +F+ M
Sbjct: 309 IESVKLFDLM 318
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 146/311 (46%), Gaps = 9/311 (2%)
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
GD P +++ ++NG K D + + P +VTYN +I LCKA +
Sbjct: 6 GDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDK 65
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
A +L + SG P+ +TY +I+ + + K + L M+ G D Y +++
Sbjct: 66 AMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMD 125
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
K GR EA + M G++ DI +Y TL+ Y +G L + LLD M + G
Sbjct: 126 YLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 185
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
+ Y +IL+ K ++ A L M + G + N Y ++D L K G+++ A+ F
Sbjct: 186 NHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYF 245
Query: 335 ESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
E M + DS Y+S++H+LC + A +L L L G+ + +++D S
Sbjct: 246 EQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIID----S 301
Query: 391 GCRREAKKIQS 401
C +E + I+S
Sbjct: 302 HC-KEGRVIES 311
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 117/242 (48%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ +C L +MR G+ PDVVTYNSL+ +N + + + D M + G
Sbjct: 88 IVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRG 147
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ +Y +L+ G E + + M+ + P F+I++ K + A+
Sbjct: 148 LKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAM 207
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++ G P VTY +I LCK+GR+ A +++ D G P++I Y +++
Sbjct: 208 LVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSL 267
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K++ E+ M +G + ++I + K GR+ E+ + MV GV+ DI
Sbjct: 268 CIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESVKLFDLMVRIGVKPDI 327
Query: 242 VS 243
++
Sbjct: 328 IT 329
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 76/138 (55%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ AY + + + ++MR+ G++P+ VTY ++I ++ + ++ ++M++
Sbjct: 192 ILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDE 251
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD YNSL+H L K ++A +F +M+ + T FN +++ CK +
Sbjct: 252 GLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIES 311
Query: 121 LRMFRGLQKHGFVPELVT 138
+++F + + G P+++T
Sbjct: 312 VKLFDLMVRIGVKPDIIT 329
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
++ +Y+ +++ K+G +D + + M K + TY+S++ LCKA+ + A ++L
Sbjct: 11 DVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEVL 70
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ +KSGV ++V G SG +EA K+R
Sbjct: 71 TTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMR 109
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 156/325 (48%), Gaps = 12/325 (3%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M G PDV TY ++I G + + L +M E G PDV +Y++++ L + +
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
+EA +F M ++P T+N ++ GLC A M + +P +VT+++
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK--- 198
LI CK G + AR +LK + + G PN +TY+++M Y L E+ A K
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMN------GYSLQAEVFEARKLFD 174
Query: 199 ---RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
KG D F Y +I + K R+ EA +M+ G+ DIVSYNTLI+ C+ G
Sbjct: 175 VMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLG 234
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
+L A+ L M G D T++IL+DG CK G + A M N+ YN
Sbjct: 235 RLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYN 294
Query: 316 CIVDRLGKDGKIDHAINVFESMEVK 340
++D + K + A +F + V+
Sbjct: 295 ILIDAMCKSRNLKEARKLFSELFVQ 319
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 162/313 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ A + +M EAG PDVVTY+++I ++ ++ +LD+ M G
Sbjct: 16 IINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKG 75
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P++++YNSL+ L + EA+ + +M+ ++ P TF++++N CK A
Sbjct: 76 ISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEAR 135
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + + G P +VTY+ L+ G + AR + + G P+ +Y ++
Sbjct: 136 GVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGY 195
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ ++ + M +G T D Y T+I ++GRL+EA D + M+T+G D+
Sbjct: 196 CKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDL 255
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+Y+ L++ +CK+G L A+ L M+ + + + ILID +CK+ N+K AR
Sbjct: 256 CTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSE 315
Query: 302 MNKIGFDSNLEAY 314
+ G N++ +
Sbjct: 316 LFVQGLQPNMKHW 328
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 158/322 (49%), Gaps = 4/322 (1%)
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
M+ G PDV +Y ++++ L ++G+ A +F+ M P T++ +++ LCK+R
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
+ AL +F ++ G P + TYN LI+GLC R R A +L E+ PN +T++
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ + +L M G + Y +++ + + EA + M+T G
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
+ D+ SYN LIN YCK ++ A L +EM QG D ++ LIDGLC+ G ++ A
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNL 352
+ M G +L Y+ ++D K G + A +F +M+ + Y+ ++ +
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 300
Query: 353 CKAKRLPSASKLLLSCLKSGVR 374
CK++ L A KL G++
Sbjct: 301 CKSRNLKEARKLFSELFVQGLQ 322
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 125/271 (46%), Gaps = 39/271 (14%)
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G+ P++ TY +I GLCK G A + K++G++G P+ +TY+TI+ ++R
Sbjct: 4 RGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDR---- 59
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
R+ EA D M G+ +I +YN+LI
Sbjct: 60 -------------------------------RVNEALDIFSYMKAKGISPNIFTYNSLIQ 88
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
C + A +L+EM + T ++LI+ CK GN+ AR L+ M ++G +
Sbjct: 89 GLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEP 148
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
N+ Y+ +++ ++ A +F+ M K D F+Y+ +++ CKAKR+ A +L
Sbjct: 149 NVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLF 208
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ G+ + ++DGL G REA
Sbjct: 209 NEMIHQGLTPDIVSYNTLIDGLCQLGRLREA 239
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 101/205 (49%), Gaps = 35/205 (17%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL------------- 47
+LI+ +C+ + +L M E G+ P+VVTY+SL+ G + + +
Sbjct: 120 LLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITK 179
Query: 48 SCSLD----------------------LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
C D L +EM+ G+ PD+ SYN+L+ L QLG+ EA
Sbjct: 180 GCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREA 239
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+ +F++M+ P T++I+L+G CK Y A R+FR +Q P +V YNILI
Sbjct: 240 HDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDA 299
Query: 146 LCKAGRLRTARWILKELGDSGHAPN 170
+CK+ L+ AR + EL G PN
Sbjct: 300 MCKSRNLKEARKLFSELFVQGLQPN 324
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ + N M G++PD+V+YN+LI G + L + DL ML
Sbjct: 190 ILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTN 249
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +Y+ L+ + G +A R+F+ M L P +NI+++ +CK+R A
Sbjct: 250 GNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEA 309
Query: 121 LRMFRGLQKHGFVPELVTYNIL 142
++F L G P + + +
Sbjct: 310 RKLFSELFVQGLQPNMKHWKLF 331
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 192/394 (48%), Gaps = 6/394 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC--SLDLLDEMLE 59
++ Y + FD +L+ M + GI PD+V++N+LI +++ L+ +LDLL E+ +
Sbjct: 227 MMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQ 286
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G+ PDV +YN+L+ Q ++A VF+DMI + P T+N M++ + +
Sbjct: 287 SGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEE 346
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A R+FR L + GF+P+ +TYN L+ K G + ++L +G N ITY T++
Sbjct: 347 AERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIH 406
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + L + + M+ G T D Y +I + K+ R+ EA +E M G++
Sbjct: 407 MYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKP 466
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+++++ LI Y K G+ A D M G + D+ + +++D ++G+ +
Sbjct: 467 TLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLY 526
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLP 359
M + + + Y ++ L K+ K + V + ME+ + L KA+ +
Sbjct: 527 RKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMELLCRMNLGIISTMLIKARCVS 586
Query: 360 SASKLL----LSCLKSGVRILKSAQKAVVDGLRH 389
+KLL L K ++ L+S A V +H
Sbjct: 587 QGAKLLKKACLQGYKPDIKSLRSIMNAYVMTEKH 620
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/379 (20%), Positives = 161/379 (42%), Gaps = 9/379 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREA-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
++I+AY + + ++ +R+A GI D +N+LI + L + + D M++
Sbjct: 751 IIIEAYGKIKLWQQAEILVKGLRQASGI--DRRIWNALIHAYAESGLYEKARAVFDNMIK 808
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G P V S N +M L G+ DE V +++ + +T ++L+ K
Sbjct: 809 TGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFE 868
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
++++ G++ G++P + Y +I LC R R ++ E+ +G P+ ++
Sbjct: 869 VMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLN 928
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ ++ ++ G D Y T+I + + R +E + +M G+
Sbjct: 929 MYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTP 988
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ SY +L+ K E A + +EM + ++ ++ + +++ AGN A L
Sbjct: 989 KLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLL 1048
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF-----ESMEVKDSFTYSSMVHNLCK 354
M + G + + + ++ G G+ A NV S+EV + YS++ K
Sbjct: 1049 AVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVS-TLPYSTVFDAYLK 1107
Query: 355 AKRLPSASKLLLSCLKSGV 373
+ LL + GV
Sbjct: 1108 NGDYNHGTTKLLEMKRDGV 1126
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 129/308 (41%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+DA+ + I N M+ AG P++ Y S+I+ ++ ++ EM
Sbjct: 855 LLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGA 914
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ N+L++ G D +V++ ++ L P T+N ++ C++ +
Sbjct: 915 GFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEG 974
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K G P+L +Y L+ KA A I +E+ + N Y +MK
Sbjct: 975 FTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKI 1034
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ +L+ MK G ++ ++ G+ +EA + + + + +++
Sbjct: 1035 YRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVS 1094
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ Y+T+ + Y K G L EM++ G E D T I A L L+
Sbjct: 1095 TLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLK 1154
Query: 301 YMNKIGFD 308
+ GFD
Sbjct: 1155 SLQDCGFD 1162
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 107/262 (40%)
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 116
M G P++ Y S++ L + + + +M P A N +LN
Sbjct: 876 MKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGN 935
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
D +++R + + G P+ TYN LI C++ R +L E+G G P +Y +
Sbjct: 936 FDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKS 995
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ + + +I M+ K Y + Y ++ + G +A + + M DG
Sbjct: 996 LLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDG 1055
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
++ I + + L+ Y G+ A +L+ ++ E ++ + D K G+
Sbjct: 1056 IEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGT 1115
Query: 297 LHLEYMNKIGFDSNLEAYNCIV 318
L M + G + + + + C +
Sbjct: 1116 TKLLEMKRDGVEPDHQVWTCFI 1137
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/411 (20%), Positives = 161/411 (39%), Gaps = 39/411 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I YC+ + + +++ ++GI ++++ +I A L ++L + L
Sbjct: 716 IISTYCKLGFPETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQAEILVKGLRQA 775
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
D +N+L+H + G ++A VF +MI P + N M+ L + D
Sbjct: 776 SGIDRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELY 835
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ LQ F T +L+ KAG + +MK
Sbjct: 836 VVVEELQDMNFKISKSTVLLLLDAFAKAGDV----------------------FEVMK-- 871
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
I + MK GY + Y ++I+ R ++ + +M G + D+
Sbjct: 872 -----------IYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDL 920
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
N L+N+Y G + + + + G E D+ T+ LI C++ + L
Sbjct: 921 AILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNE 980
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLP-- 359
M K G L++Y ++ K + A +FE M K S+ H + K R
Sbjct: 981 MGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGN 1040
Query: 360 -SASKLLLSCLKS-GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
S ++ LL+ +K G+ + ++ +G REA+ + + ++ + +
Sbjct: 1041 HSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSL 1091
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 133/340 (39%), Gaps = 39/340 (11%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
+ ++ L + + A ++F +Q G Y +I CK G TA ++ +
Sbjct: 678 YEYLITCLIEAEFFSEACQVFCDMQFIGIEASKSIYESIISTYCKLGFPETAHRLMDDAL 737
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
SG N ++ I+ + K EIL R+ D + +I A+ + G +
Sbjct: 738 QSGIPLNILSCRVIIIEAYGKIKLWQQAEILVKGLRQASGIDRRIWNALIHAYAESGLYE 797
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
+A + M+ G + S N ++ +G+L+ Y++++E++ F+ K T +L+
Sbjct: 798 KARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLL 857
Query: 284 DGLCKAGNI-----------------------------------KGARLHLEYMNKIGFD 308
D KAG++ + L + M GF
Sbjct: 858 DAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFK 917
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFES-MEV---KDSFTYSSMVHNLCKAKRLPSASKL 364
+L N +++ G D V+ S +E D TY++++ C++ R L
Sbjct: 918 PDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTL 977
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
L K G+ + K+++ + R +A +I ++R
Sbjct: 978 LNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMR 1017
>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 179/361 (49%), Gaps = 5/361 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ +C+ + M I P+V TY +L+ G TR L + L DE++E G
Sbjct: 242 FVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKG 301
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ YNS++H L G + A+ + DMI + P T++I++ GLC+N Y + A
Sbjct: 302 LLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAF 361
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + + V + ++N++I LC++ L A+ +L + G P+ +T+ T++
Sbjct: 362 KFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRH 421
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ K + +++ M + G + Y +VI F K G A ++ + G+ D+
Sbjct: 422 CKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGL-FDV 480
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTLI+ YC GK++ A+ L EM G T+ LI+ LCKAG++ A+ ++
Sbjct: 481 VTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKM 540
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G + Y ++ K + I + + M +K D TY +MV L + +
Sbjct: 541 MVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLLQEES 600
Query: 358 L 358
+
Sbjct: 601 V 601
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 178/357 (49%), Gaps = 10/357 (2%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG---IPPDVWSYNSLM 73
+++ R + GI P+VVT+N +I GA + + +L L+ +M M + PD +YNS +
Sbjct: 184 SVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFV 243
Query: 74 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 133
+ ++G A ++M+ ++ P T+ +++G + +NA R+ L + G +
Sbjct: 244 NGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLL 303
Query: 134 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 193
P V YN +I L G + A +L ++ D P+ TY+ +++ RN +
Sbjct: 304 PNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKF 363
Query: 194 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 253
L + D F + VI + L A + M G+ D+V++ TLI+ +CK
Sbjct: 364 LQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCK 423
Query: 254 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG-FDSNLE 312
+GK+E A + ++M K G + + + +I+G K G+ A L ++ + ++G FD +
Sbjct: 424 DGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLFD--VV 481
Query: 313 AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
YN ++ GKID A +F M + TY++++++LCKA + A +L+
Sbjct: 482 TYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELM 538
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 176/390 (45%), Gaps = 6/390 (1%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
+ + M G +V T+N +I + L ++ ++ L+ GI P+V ++N ++
Sbjct: 148 WKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDG 207
Query: 76 LFQLGKPDEANRVFQDM--ICG-DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
++G D A ++ + M + G + P + T+N +NG CK A + +
Sbjct: 208 AIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEI 267
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P + TY L+ G + G L A + EL + G PN++ Y +I+ +
Sbjct: 268 EPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASL 327
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+LS M K D F Y VI + G L EA +++ ++ + D S+N +IN C
Sbjct: 328 LLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLC 387
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
+ L A LL M +G D T LID CK G ++ A E M K G NL
Sbjct: 388 RSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLL 447
Query: 313 AYNCIVDRLGKDGKIDHAINVFES---MEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 369
YN +++ K+G D AI + ++ M + D TY++++H C ++ A L
Sbjct: 448 IYNSVINGFAKEGSFDPAILLIDTLRRMGLFDVVTYNTLIHGYCNCGKIDQAFALFSEMR 507
Query: 370 KSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
SG+ +++ L +G +AK++
Sbjct: 508 NSGILASHVTYNTLINSLCKAGHVLQAKEL 537
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 172/361 (47%), Gaps = 8/361 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAG---ISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 57
M+ID + + D ++ +M + PD VTYNS + G + L+ + + EM
Sbjct: 203 MIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEM 262
Query: 58 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
L I P+V +Y +L+ ++G + A R+ +++ L P + +N +++ L
Sbjct: 263 LGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDM 322
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
+ A + + P+ TY+I+I+GLC+ G L A L+ + + +A ++ +
Sbjct: 323 EGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVV 382
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ R+ ++L+ M +G D + T+I K G+++ A E+M+ G
Sbjct: 383 INYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGE 442
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+ +++ YN++IN + KEG + A LL+D + + G D T+ LI G C G I A
Sbjct: 443 KPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGL-FDVVTYNTLIHGYCNCGKIDQAFA 501
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 353
M G ++ YN +++ L K G + A + + M ++ D TY+ ++ +
Sbjct: 502 LFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFS 561
Query: 354 K 354
K
Sbjct: 562 K 562
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 149/304 (49%), Gaps = 7/304 (2%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
+++L+ Q+G + A V + +N L+ L K + +M++ +
Sbjct: 96 FDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMV 155
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
+G++ + T+N++I L K GRL A ++ +G PN +T+ I+ +
Sbjct: 156 SYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMD 215
Query: 189 LGLEILSAMKRK---GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
L L+++ M+ D Y + + F KIG L A ++ ++M+ ++ ++ +Y
Sbjct: 216 LALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYA 275
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
TL++ Y + G LE A+ L DE+ ++G + + +I L G+++GA L L M
Sbjct: 276 TLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDK 335
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAIN----VFESMEVKDSFTYSSMVHNLCKAKRLPSA 361
+ Y+ +++ L ++G ++ A + E V+D+F+++ +++ LC++ L A
Sbjct: 336 RIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGA 395
Query: 362 SKLL 365
+LL
Sbjct: 396 KQLL 399
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/416 (21%), Positives = 194/416 (46%), Gaps = 25/416 (6%)
Query: 13 DAGYTILNRMREAGISPDVV----------------TYNSLIAGATRNSLLSCSLDLLDE 56
DA + + N M GISP V +++L+ T+ + +++ +
Sbjct: 59 DALFIMGNLMNVNGISPLEVLDALISSYDICKSSPAVFDALVRTCTQIGATEGAYEVITK 118
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN-R 115
+ G V ++N+ + L +L + +++++M+ TFN+++ L K R
Sbjct: 119 LQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGR 178
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE---LGDSGHAPNAI 172
+ ++R L K G P +VT+N++I G K G + A ++++ + P+++
Sbjct: 179 LVEAVSVIYRSL-KTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSV 237
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
TY + + + + E M K + Y T++ + ++G L+ A +++
Sbjct: 238 TYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDEL 297
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
V G+ + V YN++I+ EG +E A LLL +M + D++T++I+I+GLC+ G +
Sbjct: 298 VEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYL 357
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 348
A L+ + ++ + ++N +++ L + + A + +M V+ D T+ ++
Sbjct: 358 NEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTL 417
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ CK ++ +A ++ +K+G + +V++G G A + +R
Sbjct: 418 IDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLR 473
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 126/263 (47%), Gaps = 5/263 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ + + L + E + D ++N +I R++ L+ + LL M
Sbjct: 346 IVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVR 405
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
G+ PDV ++ +L+ HC + GK + A +V++ MI P +N ++NG K D
Sbjct: 406 GLVPDVVTFGTLIDRHC--KDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFD 463
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
A+ + L++ G ++VTYN LI G C G++ A + E+ +SG + +TY T++
Sbjct: 464 PAILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLI 522
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ E++ M +G D Y +I +F K +E + + MV GV
Sbjct: 523 NSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVV 582
Query: 239 LDIVSYNTLINLYCKEGKLEAAY 261
D +Y T++ +E +E Y
Sbjct: 583 PDRQTYQTMVIPLLQEESVEFDY 605
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 141/284 (49%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E LE G P ++ +N LMH + G+ A VF + L P +FN ++NG K
Sbjct: 125 EESLECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKI 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D R+ +Q G P++ TY++LI GLCK ++ A + E+ B+G PN +T+
Sbjct: 185 GDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ +N + L +EI M + D Y T+I K G LK+A D +++M
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG LE A+ M K+ D +T LI GLC+ G
Sbjct: 305 KGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K G + + + M+
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQ 408
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 145/272 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ ++ + + + G+ P VV++N+L+ G + L L M
Sbjct: 141 ILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQAS 200
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN +F +M+ L P TF +++G CKN D A
Sbjct: 201 GVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLA 260
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++R + +P+L+TYN LI GLCK G L+ A ++ E+ G P+ ITYTT++
Sbjct: 261 MEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDG 320
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + E M ++ D Y +I+ + GR +A + +M++ G++ +
Sbjct: 321 XCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I +Y +IN CK+G + LL EM++ G+
Sbjct: 381 IGTYTMIINEXCKKGDVWTGSKLLKEMQRXGY 412
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 147/288 (51%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + G+ P V S+N+LM+ ++G D
Sbjct: 129 ECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLD 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M + P T+++++NGLCK D+A +F + +G VP VT+ LI
Sbjct: 189 EGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I +++ P+ ITY T++ + K +++ M KG
Sbjct: 249 DGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A +Y ++M+ + ++ D V+Y LI+ C+EG+ A +
Sbjct: 309 PDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
L EM G + + T+T++I+ CK G++ L+ M + G+ N+
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYVPNV 416
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 124/271 (45%), Gaps = 31/271 (11%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
FNI+++ CK A +F + K G P +V++N L+ G K G L + +
Sbjct: 139 FNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQ 198
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
SG P+ TY+ ++ + K E+ M G + + T+I K GR+
Sbjct: 199 ASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVD 258
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A + QM++ + D+++YNTLI CK+G L+ A+ L+DEM +G + DK T+T LI
Sbjct: 259 LAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 318
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF 343
DG CK G+++ A EY ++ N+ D
Sbjct: 319 DGXCKEGDLETA---FEYRKRM-IKENIRX---------------------------DDV 347
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
Y++++ LC+ R A K+L L G++
Sbjct: 348 AYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 115/273 (42%), Gaps = 39/273 (14%)
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G+ L +NIL+ CK G +R A+ + + G P+ +++ T+M
Sbjct: 131 GYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMN----------- 179
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
++KIG L E M GV D+ +Y+ LIN
Sbjct: 180 ------------------------GYIKIGDLDEGFRLKSVMQASGVHPDVYTYSVLING 215
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
CKE K++ A L DEM G + T T LIDG CK G + A M +
Sbjct: 216 LCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPD 275
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
L YN ++ L K G + A ++ + M +K D TY++++ CK L +A +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRK 335
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+K +R A A++ GL G +A+K+
Sbjct: 336 RMIKENIRXDDVAYTALISGLCQEGRSVDAEKM 368
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 89/172 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ D I +M + PD++TYN+LI G + L + DL+DEM G
Sbjct: 247 LIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y +L+ + G + A + MI ++ + +++GLC+ + +A
Sbjct: 307 LKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAE 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+M R + G PE+ TY ++I CK G + T +LKE+ G+ PN +T
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYVPNVVT 418
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 142/284 (50%)
Query: 55 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
+E LE G P ++ +N LMH + G+ A VF + L P +FN ++NG K
Sbjct: 125 EESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
+ R+ +Q G P++ TY++LI GLCK +L A + E+ D+G PN++++
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSF 244
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
TT++ ++ + L +EI M + + D Y T+I K G LK+A D + +M
Sbjct: 245 TTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSM 304
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G++ D ++Y TLI+ CKEG LE A+ M K+ D +T LI GLC+ G
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
A L M +G + Y I++ K G + + + M+
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQ 408
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 150/272 (55%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ ++C+ ++ + + + G+ P VV++N+L+ G + L+ L + M
Sbjct: 141 ILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQAS 200
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PDV++Y+ L++ L + K D+AN +F +M+ L P + +F +++G CK+ D A
Sbjct: 201 GVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLA 260
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ + P+L+TYN LI GLCK G L+ A+ ++ E+ G P+ ITYTT++
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDG 320
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + E M ++ D Y +I+ + GR +A + +M++ G++ +
Sbjct: 321 SCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I +Y +IN +CK+G + L+ EM++ G+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLMKEMQRDGY 412
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 149/284 (52%)
Query: 24 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 83
E G + +N L+ + + + + D + + G+ P V S+N+LM+ +LG +
Sbjct: 129 ECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN 188
Query: 84 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
E R+ M + P T+++++NGLCK D+A +F + +G VP V++ LI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLI 248
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
G CK GR+ A I K++ +P+ ITY T++ +N K ++++ M KG
Sbjct: 249 DGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLK 308
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 263
D Y T+I K G L+ A +Y ++M+ + ++LD V+Y LI+ C+EG+ A +
Sbjct: 309 PDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
L EM G + + T+T++I+ CK G++ ++ M + G+
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGY 412
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 124/248 (50%), Gaps = 4/248 (1%)
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G+ L +NIL+ CK G +R A+ + + G P+ +++ T+M + G
Sbjct: 131 GYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+ +AM+ G D + Y +I K +L +A + ++M+ +G+ + VS+ TLI+
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDG 250
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+CK+G+++ A + +M Q D T+ LI GLCK G++K A+ + M+ G +
Sbjct: 251 HCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPD 310
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
Y ++D K+G ++ A + M + D Y++++ LC+ R A K+L
Sbjct: 311 KITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 367 SCLKSGVR 374
L G++
Sbjct: 371 EMLSVGLK 378
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 91/172 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID +C+ D I +M +SPD++TYN+LI G +N L + DL++EM G
Sbjct: 247 LIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKG 306
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y +L+ + G + A + MI ++ + +++GLC+ + +A
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+M R + G PE+ TY ++I CK G + T ++KE+ G+ P+ +T
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
Length = 847
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 154/294 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D+YC+ G +L+ M+ G +P+ VTYN LI G ++ + L+ EML+ G
Sbjct: 546 LLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTG 605
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ ++YN L++ F G EA + ++M+ +P AT+N + GLCK +A+
Sbjct: 606 LKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAM 665
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + +P++V+YN LI G C+ G L A + EL P +TY T++
Sbjct: 666 QQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGL 725
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + ++ ++ M +G D Y ++ K+G L A ++ ++M+ +G++LD
Sbjct: 726 CRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDS 785
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
+Y T I K G A+ L +EM +GF D + +++DGLCK GN++ A
Sbjct: 786 YAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEA 839
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 133/266 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ + F+ ++ M + G+ TYN LI G LL+ +L L +EM+
Sbjct: 580 VLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLK 639
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P V +YNS ++ L +LG+ +A + DM+ +L P ++N ++ G C+ A
Sbjct: 640 GASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKA 699
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F L+ P +VTYN L+ GLC+ G L A+ + E+ + G AP+ +TYT ++
Sbjct: 700 FLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNG 759
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + E M +G D + Y T I +K+G A E+M+ G D
Sbjct: 760 SCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPD 819
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDE 266
++ YN +++ CK G LE A LL +
Sbjct: 820 LIIYNVVVDGLCKLGNLEEASELLQK 845
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 172/371 (46%), Gaps = 6/371 (1%)
Query: 37 LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 96
LI ++ S++ L + D+M++ + PDV + N ++ L +A V++ M
Sbjct: 476 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 535
Query: 97 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 156
+ P T+N +L+ CK L + +Q+ G P VTYN+LI GL K G A+
Sbjct: 536 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAK 595
Query: 157 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 216
++ E+ +G +A TY ++ F L + M KG + Y + I
Sbjct: 596 GLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGL 655
Query: 217 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
K+GR+ +A + M+ + + D+VSYNTLI YC+ G L A+LL DE+
Sbjct: 656 CKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTI 715
Query: 277 YTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
T+ L+DGLC+ G ++ A +L +E +N+ G ++ Y +V+ K G + A F+
Sbjct: 716 VTYNTLLDGLCRQGELEVAQQLKVEMINE-GIAPDIVTYTILVNGSCKMGSLSMAQEFFD 774
Query: 336 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
M + DS+ Y++ + K A L L G VVDGL G
Sbjct: 775 EMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLG 834
Query: 392 CRREAKKIQSK 402
EA ++ K
Sbjct: 835 NLEEASELLQK 845
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 147/315 (46%), Gaps = 2/315 (0%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
M E GI P +VTYN+L+ + + LDLL EM G P+ +YN L++ L + G+
Sbjct: 531 MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGE 590
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
++A + +M+ L T+N ++ G AL + + G P + TYN
Sbjct: 591 FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNS 650
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
I GLCK GR+ A L ++ + P+ ++Y T++ R + + R
Sbjct: 651 FIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDEL-RSI 709
Query: 202 YTFDGF-GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
Y F Y T++ + G L+ A +M+ +G+ DIV+Y L+N CK G L A
Sbjct: 710 YLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMA 769
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
DEM +G E D Y + I G K G+ A E M GF +L YN +VD
Sbjct: 770 QEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDG 829
Query: 321 LGKDGKIDHAINVFE 335
L K G ++ A + +
Sbjct: 830 LCKLGNLEEASELLQ 844
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 176/369 (47%), Gaps = 4/369 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI Y + + ++ ++M ++ +SPDV N ++ L+S ++++ M E
Sbjct: 475 LLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 534
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P + +YN+L+ + GK + + +M P T+N+++NGL K + A
Sbjct: 535 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 594
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K G TYN LI G G L A + +E+ G +P TY + +
Sbjct: 595 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYG 654
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + ++ LS M D Y T+I + ++G L +A +++ + +
Sbjct: 655 LCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPT 714
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV+YNTL++ C++G+LE A L EM +G D T+TIL++G CK G++ A+ +
Sbjct: 715 IVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFD 774
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G + + AY + K G A ++ E M K D Y+ +V LCK
Sbjct: 775 EMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLG 834
Query: 357 RLPSASKLL 365
L AS+LL
Sbjct: 835 NLEEASELL 843
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI YC+ + + + + +R + P +VTYN+L+ G R L + L EM+ G
Sbjct: 686 LIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG 745
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+ +Y L++ ++G A F +M+ L + + + G K T A
Sbjct: 746 IAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAF 805
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
+ + GF P+L+ YN+++ GLCK G L A +L++ G
Sbjct: 806 SLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKDG 847
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/226 (18%), Positives = 90/226 (39%), Gaps = 18/226 (7%)
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV--------------QLDI 241
A + G+ F +C ++ + ++ A ME+++ + ++ +
Sbjct: 411 AESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSV 470
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ LI +Y K+ +E + D+M K D ++ L + A
Sbjct: 471 KILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRT 530
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M + G + YN ++D K GK+ +++ M+ + TY+ +++ L K
Sbjct: 531 MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGE 590
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A L+ LK+G+++ ++ G + G EA +Q ++
Sbjct: 591 FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEM 636
>gi|414887034|tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]
Length = 617
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 170/340 (50%), Gaps = 3/340 (0%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L +RE+ + PD ++ LI+ R +L +L+LL +G+ P + +L+ L
Sbjct: 215 LLGDLRESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALG 274
Query: 78 QLGKPDEANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 136
G+ EA +F + + G++ P T +N +L G + NA ++ + + G P+
Sbjct: 275 TAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDE 334
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR-KYKLGLEILS 195
TY++L+ +AGR +AR +LKE+ G P++ ++ I+ FR+R ++ +L
Sbjct: 335 ATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRIL-AGFRDRGDWQKAFAVLR 393
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M+ G D Y +I F K L A D +M +G++ D+V++NTLI+ +CK G
Sbjct: 394 EMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGG 453
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
+ + A L +EM + T+ I+I+ L + + +G L M + G N+ Y
Sbjct: 454 RHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYT 513
Query: 316 CIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA 355
+VD G+ G+ AI+ E+M+ +M H L A
Sbjct: 514 TLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNA 553
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 125/255 (49%), Gaps = 2/255 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ Y + S +L+ M + G++PD TY+ L+ TR + LL EM G
Sbjct: 305 LLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADG 364
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P + ++ ++ G +A V ++M + P +N+M++ K +A+
Sbjct: 365 VKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAM 424
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F +++ G P++VT+N LI CK GR A + +E+ +S P TY IM
Sbjct: 425 DAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTY-NIMINL 483
Query: 182 FRNRKYKLGLE-ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+++ G+E +LS MK +G + Y T++ + + GR KEA D +E M DG++
Sbjct: 484 LGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPS 543
Query: 241 IVSYNTLINLYCKEG 255
Y+ L+N Y + G
Sbjct: 544 PTMYHALVNAYAQRG 558
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 125/332 (37%), Gaps = 61/332 (18%)
Query: 51 LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA---NRVFQDMICGDLTPCTATFNIM 107
L LL + E PD+ SY+ L+ L P +A R+ D+ L P F+ +
Sbjct: 175 LRLLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDL 234
Query: 108 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 167
++ + D AL + Q G P LI L AGR+ A + E +G
Sbjct: 235 ISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAG- 293
Query: 168 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
+ R R Y L KGY V+I LK A
Sbjct: 294 -----------EIKPRTRAYNALL--------KGY--------------VRIASLKNAEQ 320
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD----------EMEKQGFECDKY 277
+++M GV D +Y+ L++ Y + G EME G + Y
Sbjct: 321 VLDEMSQCGVAPDEATYSLLVDAYTRAG----------RWESARILLKEMEADGVKPSSY 370
Query: 278 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
+ ++ G G+ + A L M G + YN ++D GK + HA++ F M
Sbjct: 371 VFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKM 430
Query: 338 EVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
+ D T+++++ CK R A++L
Sbjct: 431 REEGIEPDVVTWNTLIDAHCKGGRHDRAAELF 462
>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 194/393 (49%), Gaps = 5/393 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
FD+ Y+I++++ E G++PD + +N++I + + + +++ +M E G+ P +YN+
Sbjct: 64 FDSIYSIISQVEENGMNPDSIFFNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNT 123
Query: 72 LMHCLFQLGKPDEANRVFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
L+ GKP+E+ ++ + M G++ P T+N+++ C + A + +
Sbjct: 124 LIKGYGIAGKPEESVKLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIAS 183
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G P++VTYN + + G L A ++ E+ ++G PN T IM + + +
Sbjct: 184 GIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREA 243
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
L MK G + + ++I FV I + + M GV+ D+++++T++N
Sbjct: 244 LRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNA 303
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+ G +E + D+M K G E D + ++IL G +A + A L M K GF N
Sbjct: 304 WSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKSGFQPN 363
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 366
+ + ++ GK+D+A+ VF+ M + + T+ +++ +A++ A ++L
Sbjct: 364 VVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNLKTFETLIWGFAEARQPWKAEEILQ 423
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ V+ KS V + R +G +EA ++
Sbjct: 424 IMTEFEVQPEKSTMLLVAEAWRATGMTKEANRL 456
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 158/315 (50%), Gaps = 7/315 (2%)
Query: 66 VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 125
V S LM+ L + GKP EA +F +I G P ++ +L L + D+ +
Sbjct: 13 VRSRTKLMNFLVEKGKPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIIS 72
Query: 126 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 185
++++G P+ + +N +I ++G + +A ++ ++G P TY T++K
Sbjct: 73 QVEENGMNPDSIFFNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAG 132
Query: 186 KYKLGLEILSAMKRKGYTFDGF-GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
K + +++L M ++G Y ++ A+ R+ EA + + +M+ G+Q D+V+Y
Sbjct: 133 KPEESVKLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTY 192
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
NT+ Y ++G L+ A ++ EM+ G + ++ T I++ G CK G I+ A M +
Sbjct: 193 NTIATAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKE 252
Query: 305 IGFDSNLEAYNCIVDR----LGKDGKIDHAINVFESMEVK-DSFTYSSMVHNLCKAKRLP 359
+G NL +N ++ + +DG +D +N+ E VK D T+S++++ A +
Sbjct: 253 LGIHPNLVIFNSLIKGFVAIMDRDG-VDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFME 311
Query: 360 SASKLLLSCLKSGVR 374
++ +K+G+
Sbjct: 312 KCREIFDDMVKAGIE 326
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 129/304 (42%), Gaps = 35/304 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ A+C + ++ +M +GI PDVVTYN++ + L + ++ EM
Sbjct: 159 VLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNN 218
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ + CG I+++G CK A
Sbjct: 219 GVQPN-------------------------ERTCG----------IIMSGYCKEGRIREA 243
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
LR +++ G P LV +N LIKG +L + + G P+ IT++TIM
Sbjct: 244 LRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNA 303
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ EI M + G D Y + +V+ ++A + + M+ G Q +
Sbjct: 304 WSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKSGFQPN 363
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V + T+I+ +C GK++ A + D+M ++G + T LI G +A A L+
Sbjct: 364 VVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNLKTFETLIWGFAEARQPWKAEEILQ 423
Query: 301 YMNK 304
M +
Sbjct: 424 IMTE 427
>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
Length = 410
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 177/360 (49%), Gaps = 4/360 (1%)
Query: 30 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 89
DV +L+ G + ++ + + DEM +G+ P+ +Y +LMH F G+ ++ +F
Sbjct: 37 DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALF 96
Query: 90 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
++M G + P T+N ++ C+ + A +F + G V +V+YN LI GLC+
Sbjct: 97 EEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRH 156
Query: 150 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 209
G+L A +L + G P+ IT+ ++ + K L + MK G+ Y
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTY 216
Query: 210 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
+IA F + + A + M G++ V+Y LI+ + +E + A+ +L MEK
Sbjct: 217 NMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEK 276
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 329
G E D +T+ +L+ LC GN+K AR + M + G + + Y+ ++ G++G
Sbjct: 277 AGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYK 336
Query: 330 AINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 385
A+ + M K +S +Y + LCK + A LL +++G++ +S +A++D
Sbjct: 337 ALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQTSESICQALLD 396
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 149/318 (46%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ Y + G+ + MR G+ P++ TYN LI R + L DEM G
Sbjct: 79 LMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRG 138
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I +V SYN+L+ L + GK +A ++ M P TFN++++G K NAL
Sbjct: 139 IVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNAL 198
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F ++ GF P VTYN+LI G C+A + A L ++ + G P +TYT ++
Sbjct: 199 PFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSF 258
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R EIL+ M++ G D Y ++ A G +K+A + M GV+
Sbjct: 259 ARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSN 318
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V Y+ +I Y +EG A L+ EM ++G + ++ + I LCK + A L+
Sbjct: 319 VIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDD 378
Query: 302 MNKIGFDSNLEAYNCIVD 319
M + G ++ ++D
Sbjct: 379 MVRAGLQTSESICQALLD 396
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 166/356 (46%), Gaps = 2/356 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ + + M G++P+ VTY +L+ G + L +EM G
Sbjct: 44 LVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGG 103
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++++YN L+ + G+ + A +F +M + ++N ++ GLC++ +A
Sbjct: 104 VEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAA 163
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ ++ G P ++T+N+L+ G KAG++ A ++ +G P+A+TY ++
Sbjct: 164 KLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGF 223
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R R LS MK +G Y +I +F + + +A + + M G+++D
Sbjct: 224 CRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDA 283
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG-NIKGARLHLE 300
+Y L+ C EG ++ A L M ++G E + ++I G + G + K +L +E
Sbjct: 284 HTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIME 343
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAK 356
M + G N +Y + L KD K A + + M T S+ L AK
Sbjct: 344 -MRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQTSESICQALLDAK 398
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 141/313 (45%), Gaps = 8/313 (2%)
Query: 96 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 155
D+T CTA ++NG CK A R+F + G P VTY L+ G G+
Sbjct: 37 DVTACTA----LVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKG 92
Query: 156 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 215
+ +E+ G PN TY ++ R +++ + M +G + Y T+IA
Sbjct: 93 FALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAG 152
Query: 216 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
+ G+L +A ++ M T+G + I+++N L++ Y K GK+ A ++M+ GF+
Sbjct: 153 LCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPS 212
Query: 276 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 335
T+ +LI G C+A ++ A L M + G + Y ++D ++ + A +
Sbjct: 213 AVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILA 272
Query: 336 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
ME D+ TY +V LC + A KL S + GV ++ G G
Sbjct: 273 GMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREG 332
Query: 392 CRREAKKIQSKIR 404
+A K+ ++R
Sbjct: 333 SSYKALKLIMEMR 345
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 131/294 (44%), Gaps = 5/294 (1%)
Query: 111 LCKNRYTDNALRMF-RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 169
LC +AL M RG + ++ L+ G CK G + AR + E+ G AP
Sbjct: 12 LCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAP 71
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
N +TYT +M F + + + G + M+R G + + Y +I + + G + A
Sbjct: 72 NEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLF 131
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
++M G+ ++VSYNTLI C+ GKL A LLD M +G T +L+DG KA
Sbjct: 132 DEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKA 191
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 345
G + A M GF + YN ++ + + A M+ + TY
Sbjct: 192 GKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTY 251
Query: 346 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ ++ + + + A ++L K+G+ + +V L G ++A+K+
Sbjct: 252 TILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKL 305
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 35/238 (14%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D Y + N+M+ AG P VTYN LIAG R ++ + L +M E
Sbjct: 183 LLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKER 242
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G L P T+ I+++ + + A
Sbjct: 243 G-----------------------------------LEPTKVTYTILIDSFARENHMGKA 267
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ G++K G + TY +L++ LC G ++ AR + + +G+ G P+ + Y ++
Sbjct: 268 FEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYG 327
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
R L+++ M++KG + Y I K + +EA ++ MV G+Q
Sbjct: 328 YGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQ 385
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 51/119 (42%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ A C + + M E G+ P V Y+ +I G R +L L+ EM +
Sbjct: 288 VLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQK 347
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G+ P+ SY + L + K EA + DM+ L + +L+ + R + N
Sbjct: 348 GLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQTSESICQALLDAKARLRGSAN 406
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 159/310 (51%), Gaps = 4/310 (1%)
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
M + P+ ++YN L+H L + G+ +A V DM+C P T+NI+L CK R
Sbjct: 1 MPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQ 60
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+ + ++ G P VTYN+L+ G+C G + A +L+ L G P+ + Y T++K
Sbjct: 61 AMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLK 120
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
++ E+++ M R+ + + VI + + G L++A +E+M G
Sbjct: 121 GLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTA 180
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+IV+YN +IN C++ ++ A LL +M+ G + D T+ L+ GLC A A +
Sbjct: 181 NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELM 240
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ M + G + +N ++ L + G + AI VF+ M K +S TYS+++ L KA
Sbjct: 241 DNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKA 300
Query: 356 KRLPSASKLL 365
+L A +L
Sbjct: 301 TKLDQALELF 310
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 185/406 (45%), Gaps = 5/406 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ ++L+ M G +PDVVTYN L+ + +++L+D M G
Sbjct: 13 LIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEG 72
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +YN LM + G D+A + +++ P T +N +L GLC +A
Sbjct: 73 CTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDAD 132
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + P T+N++I LC+ G L+ A +L+++ G N +TY I+
Sbjct: 133 ELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGL 192
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R + +LS MK G D Y T++ R +A + M+ M +G D
Sbjct: 193 CEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDN 252
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++NTLI C++G + A + +M +G + T++ +I GL KA + A
Sbjct: 253 VTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNE 312
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M GF+ + + Y + + L D I+ AI ++ + Y++++ LC+ +
Sbjct: 313 MGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGK 371
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A ++ + SG +++GL + G EA+++ K+
Sbjct: 372 TEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL 417
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 181/370 (48%), Gaps = 5/370 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++A C+ + +++ MR G +P+ VTYN L+ G + +L+LL +
Sbjct: 47 ILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSH 106
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +YN+++ L + +A+ + +M+ + P ATFN+++ LC+ A
Sbjct: 107 GCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQA 166
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + KHG +VTYN +I GLC+ + A +L ++ G P+ +TY T++K
Sbjct: 167 IQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKG 226
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ E++ M + G D + T+I + G + +A + +QM G +
Sbjct: 227 LCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPN 286
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++Y+T+I+ K KL+ A L +EM +GF DK + +L + L I+ A +
Sbjct: 287 SITYSTIISGLAKATKLDQALELFNEMGHKGFNPDK-IYQLLAECLNDDDTIEEAIQTVR 345
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
+ G + YN I+ L ++GK + AI++ M + D TY ++ L
Sbjct: 346 KLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEG 405
Query: 357 RLPSASKLLL 366
L A +LL+
Sbjct: 406 YLNEARELLI 415
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 144/311 (46%)
Query: 27 ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
+ P+ TYN LI + +L +LD+ML G PDV +YN L+ + +A
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ M TP T+N++++G+C D+AL + R L HG P V YN ++KGL
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C A R A ++ E+ PN T+ ++ R + +++L M + G T +
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I + + A + +M + G + DIV+YNTL+ C + A L+D
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M + G D T LI LC+ G + A + M G N Y+ I+ L K K
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 302
Query: 327 IDHAINVFESM 337
+D A+ +F M
Sbjct: 303 LDQALELFNEM 313
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 126/243 (51%), Gaps = 4/243 (1%)
Query: 134 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 193
P TYN LI LC+ G++R A +L ++ G AP+ +TY +++ + R Y+ +E+
Sbjct: 5 PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 64
Query: 194 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 253
+ M+ +G T + Y ++ G + +A + + + + G + V+YNT++ C
Sbjct: 65 IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCS 124
Query: 254 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 313
+ A L+ EM ++ ++ T ++I LC+ G ++ A LE M+K G +N+
Sbjct: 125 AERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVT 184
Query: 314 YNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCL 369
YN I++ L + +D A+ + M+ D TY++++ LC A R A +L+ +
Sbjct: 185 YNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMT 244
Query: 370 KSG 372
++G
Sbjct: 245 QNG 247
>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
Length = 792
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 190/396 (47%), Gaps = 7/396 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
ML+ YC + + + G++P VTY LI G + + L +M+E
Sbjct: 296 MLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQ 355
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + +N ++ L + + +A + + ++ P T+ +++ LCK++ A
Sbjct: 356 GLLLSTYEFNLVIKGLLRDKRWKDAIGLLE-LVVDTGVPDVFTYGCLIHWLCKHQKLHEA 414
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++ +++ G P +VTY+ L+ G C+ GR+ A + E+ D G PN +TYTT+MK
Sbjct: 415 VNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKG 474
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + +L+ M++ G + + Y +I + R+ E + +++ +++G
Sbjct: 475 YIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPT 534
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++YN++IN + K G + +A+ + +M K+G + T+T IDG C+ A L
Sbjct: 535 TMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLI 594
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKA 355
Y+ + G ++ AYN +D K G + A++ F + +KD T Y+S V
Sbjct: 595 YVRRDGIQPDIAAYNAFIDTFCKQGNMSRALH-FLVLLLKDGLTPDVTVYNSFVTGYKNL 653
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
K + ASK S +K V ++DG G
Sbjct: 654 KMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVG 689
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 170/388 (43%), Gaps = 49/388 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ + ++M+EAG+ P +VTY+SL+ G + +L L EM + G
Sbjct: 401 LIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKG 460
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-----ICGDLTPCTATFNIMLNGLCKNRY 116
PP+ +Y +LM + D A + +M CGD T +NI++NGL
Sbjct: 461 FPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYT-----YNILINGLYMVNR 515
Query: 117 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
M + GFVP +TYN +I G KAG + +A + +++ G PN +TYT+
Sbjct: 516 VCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTS 575
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
+ R L +++L ++R G D Y I F K G + A ++ ++ DG
Sbjct: 576 FIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDG 635
Query: 237 VQLDIVSYN-----------------------------------TLINLYCKEGKLEAAY 261
+ D+ YN TLI+ + K G + A
Sbjct: 636 LTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFAL 695
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
L EM D T T L GLC++G+I GA+ L+ M ++ N+ YN +++
Sbjct: 696 ELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINAC 755
Query: 322 GKDGKIDHAINVFESM----EVKDSFTY 345
+DGK+ A + + M V D TY
Sbjct: 756 VRDGKLQEAFQLHDEMLSSGVVPDDTTY 783
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 173/384 (45%), Gaps = 10/384 (2%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L + + G+ PDV TY LI ++ L +++L D+M E G+ P + +Y+SL+
Sbjct: 383 LLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYC 441
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G+ DEA +++ +M P T+ ++ G K + DNA + ++++G
Sbjct: 442 EKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDY 501
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYNILI GL R+ +LK G P +TY +I+ + + M
Sbjct: 502 TYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQM 561
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
++KG T + Y + I + + A + + DG+Q DI +YN I+ +CK+G +
Sbjct: 562 RKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNM 621
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A L + K G D + + G + A M K ++ E Y +
Sbjct: 622 SRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTL 681
Query: 318 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+D K G + A+ ++ M + D T++++ H LC++ + A +LL +
Sbjct: 682 IDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLL-----DDM 736
Query: 374 RILKSAQKAVVDGLRHSGCRREAK 397
R L + V + + C R+ K
Sbjct: 737 RRLDVSPNIVTYNMLINACVRDGK 760
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 179/404 (44%), Gaps = 35/404 (8%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-EMG 61
I C+ D +L +MREAG P +TY+S++ + + +L L D+ML G
Sbjct: 227 ISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATG 286
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
DV LMH G+ +A +F +++ +TP T+ +++ G +D
Sbjct: 287 KKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETY 346
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ R + + G + +N++IKGL + R + A +L+ + D+G P+ TY ++
Sbjct: 347 KLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTG-VPDVFTYGCLIHWL 405
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+++K + + MK G Y +++ + + GR+ EA +M G +
Sbjct: 406 CKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNE 465
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y TL+ Y K+ + AY LL+EM + G C YT+ ILI+GL Y
Sbjct: 466 VTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGL--------------Y 511
Query: 302 M-NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPS 360
M N++ C VD + K V + TY+S+++ KA + S
Sbjct: 512 MVNRV----------CEVDEMLK--------RFLSEGFVPTTMTYNSIINGFVKAGMMGS 553
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
A + K G+ + +DG + C A K+ +R
Sbjct: 554 AFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVR 597
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 100/444 (22%), Positives = 180/444 (40%), Gaps = 76/444 (17%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD----------- 65
T+ + MR G D Y+ +I R + ++ L DEM G+ PD
Sbjct: 171 TLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGL 230
Query: 66 ----------------------VW--SYNSLMHCLFQLGKPDEANR-------------- 87
W +Y+S++ L ++G+ DEA R
Sbjct: 231 CKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMD 290
Query: 88 ----------------------VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 125
+F +++ +TP T+ +++ G +D ++ R
Sbjct: 291 VVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCR 350
Query: 126 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 185
+ + G + +N++IKGL + R + A +L+ + D+G P+ TY ++ +++
Sbjct: 351 QMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTG-VPDVFTYGCLIHWLCKHQ 409
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
K + + MK G Y +++ + + GR+ EA +M G + V+Y
Sbjct: 410 KLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYT 469
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
TL+ Y K+ + AY LL+EM + G C YT+ ILI+GL + L+
Sbjct: 470 TLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSE 529
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSA 361
GF YN I++ K G + A ++ M K + TY+S + C+ A
Sbjct: 530 GFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLA 589
Query: 362 SKLLLSCLKSGVRILKSAQKAVVD 385
KLL+ + G++ +A A +D
Sbjct: 590 VKLLIYVRRDGIQPDIAAYNAFID 613
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 135/317 (42%), Gaps = 37/317 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD-LLDEMLEM 60
L+ Y + +FD Y +LN MR+ G+S TYN LI G + + C +D +L L
Sbjct: 471 LMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRV-CEVDEMLKRFLSE 529
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +YNS+++ + G A +++ M +TP T+ ++G C+ D A
Sbjct: 530 GFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLA 589
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ +++ G P++ YN I CK G + A L L G P+ Y + +
Sbjct: 590 VKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTG 649
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + +M ++ D Y T+I F K+G + A + +M+ + V D
Sbjct: 650 YKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPD 709
Query: 241 -----------------------------------IVSYNTLINLYCKEGKLEAAYLLLD 265
IV+YN LIN ++GKL+ A+ L D
Sbjct: 710 DKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHD 769
Query: 266 EMEKQGFECDKYTHTIL 282
EM G D T+ IL
Sbjct: 770 EMLSSGVVPDDTTYDIL 786
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 168/385 (43%), Gaps = 11/385 (2%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEML---EMGIPPDVWSYNSLMHCLFQLGKPDE 84
SP V L+ A ++ L + +L+D +L + G P V + ++ CL +
Sbjct: 74 SPTVQHAFHLLRSAALDTRLPPN-ELVDAVLSTVDAGSPAAVTLLSHVLTCLSRAASDCA 132
Query: 85 ANRV-FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 143
A + M+ + P + +L + +AL +F ++ G + Y+++I
Sbjct: 133 AAAAAYSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVI 192
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
+ + G A + E+ +G P+ Y + + R L++L M+ G+
Sbjct: 193 RACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFE 252
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQM-VTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
Y +V+ VK+GR+ EA +QM + G ++D+V L++ YC G++ A
Sbjct: 253 PWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALD 312
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL-EYMNKIGFDSNLEAYNCIVDRL 321
L DE+ G T+ +LI G C A + L M + G + +N ++ L
Sbjct: 313 LFDEVVSDGVTPTNVTYGVLIKG-CDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGL 371
Query: 322 GKDGKIDHAINVFE---SMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
+D + AI + E V D FTY ++H LCK ++L A L ++GV+
Sbjct: 372 LRDKRWKDAIGLLELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIV 431
Query: 379 AQKAVVDGLRHSGCRREAKKIQSKI 403
+++ G G EA K+ S++
Sbjct: 432 TYHSLLLGYCEKGRMDEALKLYSEM 456
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.139 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,130,308,302
Number of Sequences: 23463169
Number of extensions: 249095467
Number of successful extensions: 973629
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8108
Number of HSP's successfully gapped in prelim test: 4375
Number of HSP's that attempted gapping in prelim test: 746853
Number of HSP's gapped (non-prelim): 82534
length of query: 410
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 265
effective length of database: 8,957,035,862
effective search space: 2373614503430
effective search space used: 2373614503430
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 78 (34.7 bits)