BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015246
(410 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0C043|PP318_ARATH Putative pentatricopeptide repeat-containing protein At4g17915
OS=Arabidopsis thaliana GN=At4g17915 PE=3 SV=1
Length = 463
Score = 431 bits (1109), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/410 (51%), Positives = 289/410 (70%), Gaps = 2/410 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI YC+FV + Y + RMR+AGI PDV TYNSLIAGA R +L L L DEMLE G
Sbjct: 54 LISGYCRFVGIEEAYAVTRRMRDAGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWG 113
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRV-FQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PD+WSYN+LM C F+LGK +EA RV ++D+ L P T+N++L+ LCK Y DNA
Sbjct: 114 IYPDLWSYNTLMCCYFKLGKHEEAFRVLYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNA 173
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F+ +Q F PEL+TYNILI GLCK+ R+ TA+W+L EL SG+ PNA+TYTTI+K
Sbjct: 174 LELFKEMQSR-FKPELMTYNILINGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKL 232
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+ R+ + GL++ MKR+GYT+DG+ Y V++A +K GR KEA +YM+++V G + D
Sbjct: 233 YFKTRRIRRGLQLFLEMKREGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRRHD 292
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IVSYNTL+NLY K+G L+A LL E+E++G + D+YTHTI+++GL + G + A H
Sbjct: 293 IVSYNTLLNLYFKDGNLDAVDDLLGEIERRGMKADEYTHTIIVNGLLRTGQTRRAEEHFV 352
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPS 360
M ++G NL NC+VD L K G +D A+ FESMEVKD +TY+S+VHNLCK R
Sbjct: 353 SMGEMGIGLNLVTCNCLVDGLCKAGHVDRAMRYFESMEVKDEYTYTSVVHNLCKDMRFVC 412
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
ASKLLLSC G++I SA++AV+ GLR SGC EA+K ++++++ + +
Sbjct: 413 ASKLLLSCYNKGIKIPTSARRAVLSGLRMSGCYGEARKAKAEMKLTLVGN 462
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 133/279 (47%), Gaps = 6/279 (2%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
T NI ++ LCK R + A + + G P++VTYN LI G C+ + A + +
Sbjct: 13 TRLLNICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVTR 72
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
+ D+G P+ TY +++ R L + M G D + Y T++ + K+G
Sbjct: 73 RMRDAGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFKLG 132
Query: 221 RLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
+ +EA + + + G+ +YN L++ CK G ++ A L EM+ + F+ + T+
Sbjct: 133 KHEEAFRVLYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEMQSR-FKPELMTY 191
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
ILI+GLCK+ + A+ L + K G+ N Y I+ K +I + +F M+
Sbjct: 192 NILINGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQLFLEMKR 251
Query: 340 K----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
+ D + Y ++V L K R A + + ++ G R
Sbjct: 252 EGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRR 290
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 160/335 (47%), Gaps = 8/335 (2%)
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N + L + K ++A + D I + P T+N +++G C+ + A + R ++
Sbjct: 17 NICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVTRRMRD 76
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G P++ TYN LI G + L ++ E+ + G P+ +Y T+M C F+ K++
Sbjct: 77 AGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFKLGKHEE 136
Query: 190 GLEIL-SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
+L ++ G Y ++ A K G + A + ++M + + ++++YN LI
Sbjct: 137 AFRVLYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEMQSR-FKPELMTYNILI 195
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGF 307
N CK ++ A +L E++K G+ + T+T ++ K I +G +L LE M + G+
Sbjct: 196 NGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQLFLE-MKREGY 254
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASK 363
+ AY +V L K G+ A + + K D +Y+++++ K L +
Sbjct: 255 TYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRRHDIVSYNTLLNLYFKDGNLDAVDD 314
Query: 364 LLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
LL + G++ + +V+GL +G R A++
Sbjct: 315 LLGEIERRGMKADEYTHTIIVNGLLRTGQTRRAEE 349
>sp|Q56XR6|PP421_ARATH Pentatricopeptide repeat-containing protein At5g46680
OS=Arabidopsis thaliana GN=At5g46680 PE=2 SV=2
Length = 468
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 280/407 (68%), Gaps = 3/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI Y +F+ D Y + RMREAGI PDV TYNSLI+GA +N +L+ L L DEML G
Sbjct: 54 LIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSG 113
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVF-QDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+WSYN+LM C F+LG+ EA ++ +D+ L P T+NI+L+ LCK+ +TDNA
Sbjct: 114 LSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNA 173
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +F+ L K PEL+TYNILI GLCK+ R+ + W+++EL SG+ PNA+TYTT++K
Sbjct: 174 IELFKHL-KSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKM 232
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ-L 239
F+ ++ + GL++ MK++GYTFDGF C V++A +K GR +EA + M ++V G +
Sbjct: 233 YFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQ 292
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DIVSYNTL+NLY K+G L+A LL+E+E +G + D YTHTI+++GL GN GA HL
Sbjct: 293 DIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHL 352
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLP 359
+ ++G ++ NC++D L K G +D A+ +F SMEV+D FTY+S+VHNLCK RL
Sbjct: 353 ACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVRDEFTYTSVVHNLCKDGRLV 412
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 406
ASKLLLSC G++I SA++AV+ G+R + + A+K KI+ A
Sbjct: 413 CASKLLLSCYNKGMKIPSSARRAVLSGIRETVSYQAARKTHIKIKAA 459
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 6/279 (2%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 160
T NI +N LCK R + A + + G +P+++TYN LIKG + + A + +
Sbjct: 13 TKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTR 72
Query: 161 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 220
+ ++G P+ TY +++ +N L++ M G + D + Y T+++ + K+G
Sbjct: 73 RMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLG 132
Query: 221 RLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 279
R EA + E + G+ I +YN L++ CK G + A L + K + + T+
Sbjct: 133 RHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELMTY 191
Query: 280 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
ILI+GLCK+ + + + K G+ N Y ++ K +I+ + +F M+
Sbjct: 192 NILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKK 251
Query: 340 K----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
+ D F ++V L K R A + + ++SG R
Sbjct: 252 EGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTR 290
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 157/364 (43%), Gaps = 44/364 (12%)
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
S NSL C F+ + A + D I + P T+N ++ G + D A + R +
Sbjct: 19 SVNSL--CKFR--NLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRM 74
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
++ G P++ TYN LI G K L + E+ SG +P+ +Y T+M C F+ ++
Sbjct: 75 REAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRH 134
Query: 188 KLGLEI--------------------LSAMKRKGYTFDGF---------------GYCTV 212
+I L A+ + G+T + Y +
Sbjct: 135 GEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNIL 194
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
I K R+ M ++ G + V+Y T++ +Y K ++E L +M+K+G+
Sbjct: 195 INGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGY 254
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS-NLEAYNCIVDRLGKDGKIDHAI 331
D + + ++ L K G + A + + + G S ++ +YN +++ KDG +D
Sbjct: 255 TFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVD 314
Query: 332 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
++ E +E+K D +T++ +V+ L A K L + G++ ++DGL
Sbjct: 315 DLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGL 374
Query: 388 RHSG 391
+G
Sbjct: 375 CKAG 378
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 205 bits (522), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 215/415 (51%), Gaps = 7/415 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C+ D +L+RMR SPD VTYN +I L +L +L+++L
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN 223
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P V +Y L+ G DEA ++ +M+ L P T+N ++ G+CK D A
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M R L+ G P++++YNIL++ L G+ ++ ++ PN +TY+ ++
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ K + + +L MK KG T D + Y +IAAF + GRL A +++E M++DG DI
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHLE 300
V+YNT++ CK GK + A + ++ + G + ++ + L +G+ I+ + LE
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDS-FTYSSMVHNLCKAK 356
M+ G D + YN ++ L ++G +D A + M E S TY+ ++ CKA
Sbjct: 464 MMSN-GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 522
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK-IRMAKISH 410
R+ A +L S + +G R ++ +++G+ +G R EA ++ + +R+ IS
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISE 577
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 162/325 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+A D +++ M G+ PD+ TYN++I G + ++ + +++ +
Sbjct: 233 ILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELK 292
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV SYN L+ L GK +E ++ M P T++I++ LC++ + A
Sbjct: 293 GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEA 352
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + +++ G P+ +Y+ LI C+ GRL A L+ + G P+ + Y T++
Sbjct: 353 MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLAT 412
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+N K LEI + G + + Y T+ +A G A + +M+++G+ D
Sbjct: 413 LCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPD 472
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++YN++I+ C+EG ++ A+ LL +M F T+ I++ G CKA I+ A LE
Sbjct: 473 EITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLE 532
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDG 325
M G N Y +++ +G G
Sbjct: 533 SMVGNGCRPNETTYTVLIEGIGFAG 557
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 118/243 (48%), Gaps = 4/243 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ + +L M+E G++PD +Y+ LIA R L +++ L+ M+
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN+++ L + GK D+A +F + +P ++++N M + L + A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L M + +G P+ +TYN +I LC+ G + A +L ++ P+ +TY ++
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 517
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ + + + +L +M G + Y +I G EA ++ D V++D
Sbjct: 518 FCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAM----ELANDLVRID 573
Query: 241 IVS 243
+S
Sbjct: 574 AIS 576
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 197 bits (501), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 213/402 (52%), Gaps = 11/402 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I YC+ + ++L+RM +SPDVVTYN+++ + L ++++LD ML+
Sbjct: 177 VMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV +Y L+ + A ++ +M TP T+N+++NG+CK D A
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G P ++T+NI+++ +C GR A +L ++ G +P+ +T+ ++
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN- 352
Query: 181 CFRNRKYKLG--LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
F RK LG ++IL M + G + Y ++ F K ++ A +Y+E+MV+ G
Sbjct: 353 -FLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
DIV+YNT++ CK+GK+E A +L+++ +G T+ +IDGL KAG A
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 299 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 354
L+ M + Y+ +V L ++GK+D AI F E ++ T++S++ LCK
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+++ A L+ + G + +++ +++GL + G +EA
Sbjct: 532 SRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEA 573
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 186/377 (49%), Gaps = 7/377 (1%)
Query: 32 VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 91
V N+ + R L L+ M+ G PD+ +L+ +LGK +A ++ +
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 92 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
+ P T+N+M++G CK +NAL + L + P++VTYN +++ LC +G+
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGK 219
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
L+ A +L + P+ ITYT +++ R+ +++L M+ +G T D Y
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
++ K GRL EA ++ M + G Q +++++N ++ C G+ A LL +M ++G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
F T ILI+ LC+ G + A LE M + G N +YN ++ K+ K+D AI
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 332 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
E M + D TY++M+ LCK ++ A ++L G + V+DGL
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 388 RHSGCRREAKKIQSKIR 404
+G +A K+ ++R
Sbjct: 460 AKAGKTGKAIKLLDEMR 476
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 158/309 (51%), Gaps = 16/309 (5%)
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMI----CGDLTPCTATFNIMLNGLCKNRYTDNA 120
DV S N L + + G+ +E + ++M+ D+ PCT ++ G C+ T A
Sbjct: 102 DVESNNHLRQ-MVRTGELEEGFKFLENMVYHGNVPDIIPCTT----LIRGFCRLGKTRKA 156
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ L+ G VP+++TYN++I G CKAG + A +L + S P+ +TY TI++
Sbjct: 157 AKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRS 213
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K K +E+L M ++ D Y +I A + + A +++M G D
Sbjct: 214 LCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPD 273
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+YN L+N CKEG+L+ A L++M G + + TH I++ +C G A L
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M + GF ++ +N +++ L + G + AI++ E M +S +Y+ ++H CK K
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393
Query: 357 RLPSASKLL 365
++ A + L
Sbjct: 394 KMDRAIEYL 402
Score = 125 bits (313), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 124/255 (48%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L M G SP VVT+N LI R LL ++D+L++M + G P+ SYN L+H
Sbjct: 331 LLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFC 390
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ K D A + M+ P T+N ML LCK+ ++A+ + L G P L+
Sbjct: 391 KEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLI 450
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN +I GL KAG+ A +L E+ P+ ITY++++ R K ++
Sbjct: 451 TYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF 510
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+R G + + +++ K + A D++ M+ G + + SY LI EG
Sbjct: 511 ERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMA 570
Query: 258 EAAYLLLDEMEKQGF 272
+ A LL+E+ +G
Sbjct: 571 KEALELLNELCNKGL 585
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 117/237 (49%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C+ IL +M + G P+ ++YN L+ G + + +++ L+ M+
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN+++ L + GK ++A + + +P T+N +++GL K T A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ ++ P+ +TY+ L+ GL + G++ A E G PNA+T+ +IM
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLG 528
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
++R+ ++ L M +G + Y +I G KEA + + ++ G+
Sbjct: 529 LCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 292
V L+ V N + + G+LE + L+ M G D T LI G C+ G
Sbjct: 94 VNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKT 153
Query: 293 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-DSFTYSSMVHN 351
+ A LE + G ++ YN ++ K G+I++A++V + M V D TY++++ +
Sbjct: 154 RKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRS 213
Query: 352 LCKAKRLPSASKLL 365
LC + +L A ++L
Sbjct: 214 LCDSGKLKQAMEVL 227
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/393 (31%), Positives = 204/393 (51%), Gaps = 39/393 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
MLI C+ GY +L MR+ I P+ VTYN+LI G + + + LL+EML
Sbjct: 268 MLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSF 327
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ ++N+L+ G EA ++F M LTP ++ ++L+GLCKN D A
Sbjct: 328 GLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLA 387
Query: 121 ----LRMFR---------------GLQKHGFV----------------PELVTYNILIKG 145
+RM R GL K+GF+ P++VTY+ LI G
Sbjct: 388 RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 447
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
CK GR +TA+ I+ + G +PN I Y+T++ C R K + I AM +G+T D
Sbjct: 448 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 507
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
F + ++ + K G++ EA ++M M +DG+ + VS++ LIN Y G+ A+ + D
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 567
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM K G +T+ L+ GLCK G+++ A L+ ++ + + YN ++ + K G
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCK 354
+ A+++F M + DS+TY+S++ LC+
Sbjct: 628 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 660
Score = 165 bits (417), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 179/366 (48%), Gaps = 4/366 (1%)
Query: 6 YCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD 65
YC+ F A +L+ M+ G+ DV TYN LI R++ ++ LL +M + I P+
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297
Query: 66 VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 125
+YN+L++ GK A+++ +M+ L+P TFN +++G AL+MF
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357
Query: 126 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 185
++ G P V+Y +L+ GLCK AR + +G ITYT ++ +N
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417
Query: 186 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 245
+ +L+ M + G D Y +I F K+GR K A + + ++ G+ + + Y+
Sbjct: 418 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 477
Query: 246 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 305
TLI C+ G L+ A + + M +G D +T +L+ LCKAG + A + M
Sbjct: 478 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 537
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSA 361
G N +++C+++ G G+ A +VF+ M FTY S++ LCK L A
Sbjct: 538 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 597
Query: 362 SKLLLS 367
K L S
Sbjct: 598 EKFLKS 603
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 191/399 (47%), Gaps = 6/399 (1%)
Query: 16 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 75
++ L M + I PDV T+N LI S L+ +M + G P + +YN+++H
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 237
Query: 76 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 135
+ G+ A + M + T+N++++ LC++ + R ++K P
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
VTYN LI G G++ A +L E+ G +PN +T+ ++ +K L++
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357
Query: 196 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 255
M+ KG T Y ++ K A + +M +GV + ++Y +I+ CK G
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417
Query: 256 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 315
L+ A +LL+EM K G + D T++ LI+G CK G K A+ + + ++G N Y+
Sbjct: 418 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 477
Query: 316 CIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
++ + G + AI ++E+M +D FT++ +V +LCKA ++ A + +
Sbjct: 478 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 537
Query: 372 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 410
G+ + +++G +SG +A + + M K+ H
Sbjct: 538 GILPNTVSFDCLINGYGNSGEGLKAFSVFDE--MTKVGH 574
Score = 148 bits (373), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 179/377 (47%), Gaps = 5/377 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ D +LN M + GI PD+VTY++LI G + + +++ + +G
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+ Y++L++ ++G EA R+++ MI T TFN+++ LCK A
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R + G +P V+++ LI G +G A + E+ GH P TY +++K
Sbjct: 529 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + L ++ D Y T++ A K G L +A +MV + D
Sbjct: 589 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQG-FECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y +LI+ C++GK A L E E +G +K +T +DG+ KAG K E
Sbjct: 649 YTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFRE 708
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAK 356
M+ +G ++ N ++D + GKI+ ++ M ++ TY+ ++H K K
Sbjct: 709 QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 768
Query: 357 RLPSASKLLLSCLKSGV 373
+ ++ L S + +G+
Sbjct: 769 DVSTSFLLYRSIILNGI 785
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 180/376 (47%), Gaps = 6/376 (1%)
Query: 28 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 87
+P V Y+ LI R ++ SL++ M G P V++ N+++ + + G+
Sbjct: 122 NPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179
Query: 88 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 147
++M+ + P ATFNI++N LC + + + + ++K G+ P +VTYN ++ C
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K GR + A +L + G + TY ++ R+ + G +L M+++ +
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y T+I F G++ A+ + +M++ G+ + V++N LI+ + EG + A + M
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 359
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
E +G + ++ +L+DGLCK AR M + G Y ++D L K+G +
Sbjct: 360 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419
Query: 328 DHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
D A+ + M D TYS++++ CK R +A +++ + G+ +
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479
Query: 384 VDGLRHSGCRREAKKI 399
+ GC +EA +I
Sbjct: 480 IYNCCRMGCLKEAIRI 495
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/432 (20%), Positives = 180/432 (41%), Gaps = 52/432 (12%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS---------------- 45
L+ A C+ + ++ M + I PD TY SLI+G R
Sbjct: 619 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 678
Query: 46 -------LLSCSLD-------------LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 85
+ +C +D ++M +G PD+ + N+++ ++GK ++
Sbjct: 679 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 738
Query: 86 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
N + +M + P T+NI+L+G K + + ++R + +G +P+ +T + L+ G
Sbjct: 739 NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 798
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
+C++ L ILK G + T+ ++ C N + +++ M G + D
Sbjct: 799 ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 858
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
+++ + R +E+ + +M G+ + Y LIN C+ G ++ A+++ +
Sbjct: 859 KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 918
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM + ++ L K G A L L +M K+ + ++ ++ K+G
Sbjct: 919 EMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNG 978
Query: 326 KIDHAINVFESMEVK----------DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
NV E++E++ D +Y+ ++ LC + A +L G
Sbjct: 979 ------NVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLA 1032
Query: 376 LKSAQKAVVDGL 387
+ KA++ GL
Sbjct: 1033 NATTYKALIRGL 1044
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 143/312 (45%), Gaps = 1/312 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ Y + + + + GI PD +T +SL+ G +++L L +L +
Sbjct: 759 ILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICR 818
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ D +++N L+ G+ + A + + M ++ T + M++ L +N +
Sbjct: 819 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 878
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + K G PE Y LI GLC+ G ++TA + +E+ P + + +++
Sbjct: 879 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 938
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K +L M + + T++ K G + EA + M G++LD
Sbjct: 939 LAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD 998
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG-LCKAGNIKGARLHL 299
+VSYN LI C +G + A+ L +EM+ GF + T+ LI G L + GA + L
Sbjct: 999 LVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIIL 1058
Query: 300 EYMNKIGFDSNL 311
+ + GF +++
Sbjct: 1059 KDLLARGFITSM 1070
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 194 bits (494), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 202/404 (50%), Gaps = 5/404 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ I+ +C+ IL +M + G P +VT NSL+ G + +S ++ L+D+M+EM
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD ++ +L+H LFQ K EA + + M+ P T+ ++NGLCK D A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + ++K ++V YN +I GLCK + A + ++ G P+ TY ++ C
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV-TDGVQL 239
++ +LS M K D + +I AFVK G+L EA ++MV +
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D+V+YNTLI +CK ++E + EM ++G + T+T LI G +A + A++
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKA 355
+ M G ++ YN ++D L +G ++ A+ VFE M+ +D TY++M+ LCKA
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
++ L S GV+ ++ G G + EA +
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 518
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 163/331 (49%), Gaps = 2/331 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C++ D + + N+M GI PDV TYN LI+ S + LL +MLE
Sbjct: 256 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN 315
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PD+ +N+L+ + GK EA +++ +M+ P +N ++ G CK + +
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEG 375
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +FR + + G V VTY LI G +A A+ + K++ G P+ +TY ++
Sbjct: 376 MEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDG 435
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
N + L + M+++ D Y T+I A K G++++ D + GV+ +
Sbjct: 436 LCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPN 495
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+Y T+++ +C++G E A L EM++ G + T+ LI + G+ + ++
Sbjct: 496 VVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIK 555
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
M GF + + + + L DG++D +
Sbjct: 556 EMRSCGFAGDASTFGLVTNML-HDGRLDKSF 585
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 143/331 (43%), Gaps = 39/331 (11%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K D+A +F DM+ P F+ +L+ + K D + + +Q G L TY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
I I C+ +L A IL ++ G+ P+ +T +++ + + ++ M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
GY D + T++ + + EA +E+MV G Q D+V+Y +IN CK G+ + A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
LL++MEK E D + +IDGLCK +
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKH----------------------------- 265
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
+D A ++F ME K D FTY+ ++ LC R AS+LL L+ +
Sbjct: 266 ------MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPD 319
Query: 377 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
A++D G EA+K+ ++ +K
Sbjct: 320 LVFFNALIDAFVKEGKLVEAEKLYDEMVKSK 350
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 93/194 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + Q D + +M G+ PD++TYN L+ G N + +L + + M +
Sbjct: 397 LIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRD 456
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D+ +Y +++ L + GK ++ +F + + P T+ M++G C+ + A
Sbjct: 457 MKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 516
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++ G +P TYN LI+ + G + ++KE+ G A +A T+ +
Sbjct: 517 ALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML 576
Query: 182 FRNRKYKLGLEILS 195
R K L++LS
Sbjct: 577 HDGRLDKSFLDMLS 590
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 4/192 (2%)
Query: 221 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 280
+L +A MV IV ++ L++ K K + L ++M+ G + YT++
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 281 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM--- 337
I I+ C+ + A L M K+G+ ++ N +++ +I A+ + + M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 338 -EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
D+ T++++VH L + + A L+ + G + AV++GL G A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 397 KKIQSKIRMAKI 408
+ +K+ KI
Sbjct: 235 LNLLNKMEKGKI 246
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C + + + M++ + D+VTY ++I + + DL +
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V +Y ++M + G +EA+ +F +M P + T+N ++ ++ +
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAAS 550
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
+ + ++ GF + T+ L+ + GRL
Sbjct: 551 AELIKEMRSCGFAGDASTFG-LVTNMLHDGRL 581
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 192 bits (489), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 209/408 (51%), Gaps = 9/408 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ A+C D+ ++L M + G P+ V Y +LI ++ + ++ +L LL+EM M
Sbjct: 222 VVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLM 281
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD ++N ++ L + + +EA ++ M+ P T+ ++NGLCK D A
Sbjct: 282 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA 341
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS-GHAPNAITYTTIMK 179
+F + K PE+V +N LI G GRL A+ +L ++ S G P+ TY +++
Sbjct: 342 KDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
++ L LE+L M+ KG + + Y ++ F K+G++ EA + + +M DG++
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ V +N LI+ +CKE ++ A + EM ++G + D YT LI GLC+ IK A L
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
M G +N YN +++ + G+I A + M + D TY+S++ LC+A
Sbjct: 518 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA 577
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ A L L+ G + +++GL SG EA + Q ++
Sbjct: 578 GEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM 625
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 180/362 (49%), Gaps = 5/362 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREA-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
LI + D +L+ M + GI PDV TYNSLI G + L+ +L++L +M
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V+SY L+ +LGK DEA V +M L P T FN +++ CK A
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +FR + + G P++ T+N LI GLC+ ++ A W+L+++ G N +TY T++
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R + K ++++ M +G D Y ++I + G + +A E+M+ DG
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+S N LIN C+ G +E A EM +G D T LI+GLC+AG I+
Sbjct: 599 NISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFR 658
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKI-DHAINVFESME---VKDSFTYSSMVHNLCKAK 356
+ G + +N ++ L K G + D + + E +E V + T+S ++ ++ +
Sbjct: 659 KLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQE 718
Query: 357 RL 358
L
Sbjct: 719 TL 720
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 182/380 (47%), Gaps = 9/380 (2%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P +YN ++ + + ++ +ML IPP ++++ +M + + D A +
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
+DM P + + +++ L K + AL++ + G VP+ T+N +I GLCK
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
R+ A ++ + G AP+ ITY +M + + ++ + +
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI---- 355
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
+ T+I FV GRL +A + MVT G+ D+ +YN+LI Y KEG + A +L +M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
+G + + Y++TIL+DG CK G I A L M+ G N +NC++ K+ +I
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 328 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
A+ +F M K D +T++S++ LC+ + A LL + GV +
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 384 VDGLRHSGCRREAKKIQSKI 403
++ G +EA+K+ +++
Sbjct: 536 INAFLRRGEIKEARKLVNEM 555
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 153/298 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D +C+ D Y +LN M G+ P+ V +N LI+ + + ++++ EM
Sbjct: 429 ILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV+++NSL+ L ++ + A + +DMI + T T+N ++N + A
Sbjct: 489 GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 548
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + G + +TYN LIKGLC+AG + AR + +++ GHAP+ I+ ++
Sbjct: 549 RKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILING 608
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R+ + +E M +G T D + ++I + GR+++ ++ +G+ D
Sbjct: 609 LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPD 668
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 298
V++NTL++ CK G + A LLLDE + GF + T +IL+ + + R +
Sbjct: 669 TVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRFY 726
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 120/284 (42%), Gaps = 15/284 (5%)
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM----KCCFR 183
++G+ Y +LI L G +T +L ++ D G + +IM K F
Sbjct: 103 SQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFP 162
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
+ +L LE+ + + TF Y V+ V K A + M++ + + +
Sbjct: 163 GQTTRLMLEMRNVYSCEP-TFK--SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFT 219
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
+ ++ +C ++++A LL +M K G + + LI L K + A LE M
Sbjct: 220 FGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 279
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLP 359
+G + E +N ++ L K +I+ A + M ++ D TY +++ LCK R+
Sbjct: 280 LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVD 339
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+A L K + I + ++ G G +AK + S +
Sbjct: 340 AAKDLFYRIPKPEIVIFNT----LIHGFVTHGRLDDAKAVLSDM 379
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 109/264 (41%), Gaps = 1/264 (0%)
Query: 103 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL-RTARWILKE 161
+ +++ L N R+ ++ G V + + +++ KAG +T R +L+
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
P +Y +++ +K+ + M + F + V+ AF +
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
+ A + M G + V Y TLI+ K ++ A LL+EM G D T
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 341
+I GLCK I A + M GF + Y +++ L K G++D A ++F + +
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Query: 342 SFTYSSMVHNLCKAKRLPSASKLL 365
+++++H RL A +L
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVL 376
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 190 bits (483), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 211/443 (47%), Gaps = 39/443 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ +L +M + G P++VT +SL+ G + +S ++ L+D+M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+ ++N+L+H LF K EA + M+ P T+ +++NGLCK TD A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +++ P ++ YN +I GLCK + A + KE+ G PN +TY++++ C
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL- 239
++ +LS M + D F + +I AFVK G+L EA ++MV +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 240 ----------------------------------DIVSYNTLINLYCKEGKLEAAYLLLD 265
D+V+YNTLI +CK ++E +
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM ++G + T+ ILI GL +AG+ A+ + M G N+ YN ++D L K+G
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 326 KIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
K++ A+ VFE ++ +TY+ M+ +CKA ++ L + GV+ A
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Query: 382 AVVDGLRHSGCRREAKKIQSKIR 404
++ G G + EA + +++
Sbjct: 541 TMISGFCRKGSKEEADALFKEMK 563
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 189/356 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++ C+ D + +LN+M + + P V+ YN++I G + + +L+L EM
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+V +Y+SL+ CL G+ +A+R+ DMI + P TF+ +++ K A
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + K P +VTY+ LI G C RL A+ + + + P+ +TY T++K
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ + G+E+ M ++G + Y +I + G A + ++MV+DGV +
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++YNTL++ CK GKLE A ++ + +++ E YT+ I+I+G+CKAG ++
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAK 356
++ G ++ AYN ++ + G + A +F+ M+ + S + L +A+
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 581
Score = 161 bits (408), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 168/337 (49%), Gaps = 2/337 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C++ D + M GI P+VVTY+SLI+ S + LL +M+E
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV+++++L+ + GK EA +++ +M+ + P T++ ++NG C + D A
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 122 RMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+MF + KH F P++VTYN LIKG CK R+ + +E+ G N +TY +++
Sbjct: 382 QMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+ + EI M G + Y T++ K G+L++A E + ++
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I +YN +I CK GK+E + L + +G + D + +I G C+ G+ + A +
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M + G N YN ++ +DG + + + + M
Sbjct: 561 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 159 bits (402), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 168/330 (50%), Gaps = 1/330 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + + +L+ M E I+PDV T+++LI + L + L DEM++
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P + +Y+SL++ + DEA ++F+ M+ P T+N ++ G CK + + +
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + + G V VTYNILI+GL +AG A+ I KE+ G PN +TY T++
Sbjct: 417 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N K + + + ++R + Y +I K G++++ D + GV+ D+
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNT+I+ +C++G E A L EM++ G + + LI + G+ + + ++
Sbjct: 537 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 596
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
M GF + + + L DG++D +
Sbjct: 597 MRSCGFAGDASTIGLVTNML-HDGRLDKSF 625
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 176/386 (45%), Gaps = 4/386 (1%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
+ D + M ++ P ++ ++ L++ + + + L ++M +GIP + ++Y
Sbjct: 60 LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY 119
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
+ L++C + + A V M+ P T + +LNG C ++ A+ + +
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G+ P VT+N LI GL + A ++ + G P+ +TY ++ + L
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+L+ M++ Y T+I K + +A + ++M T G++ ++V+Y++LI+
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
C G+ A LL +M ++ D +T + LID K G + A + M K D
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
++ Y+ +++ ++D A +FE M K D TY++++ CK KR+ ++
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSG 391
+ G+ ++ GL +G
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAG 445
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 146/299 (48%), Gaps = 5/299 (1%)
Query: 109 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
NGL + + D+A+ +F + K P ++ ++ L+ + K + + +++ + G
Sbjct: 55 NGLSELKL-DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
N TY+ ++ C R + L L +L M + GY + +++ + R+ EA
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
++QM G Q + V++NTLI+ K A L+D M +G + D T+ ++++GLCK
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 344
G+ A L M + + + YN I+D L K +D A+N+F+ ME K + T
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
YSS++ LC R AS+LL ++ + A++D G EA+K+ ++
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Score = 108 bits (270), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 148/323 (45%), Gaps = 4/323 (1%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K D+A +F +M+ P F+ +L+ + K D + + +Q G TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
ILI C+ +L A +L ++ G+ PN +T ++++ +++ + ++ M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
GY + + T+I + EA +++MV G Q D+V+Y ++N CK G + A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
+ LL++ME+ E + +IDGLCK ++ A + M G N+ Y+ ++
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
L G+ A + M + D FT+S+++ K +L A KL +K +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 377 KSAQKAVVDGLRHSGCRREAKKI 399
++++G EAK++
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQM 383
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 94/195 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI Q D I M G+ P+++TYN+L+ G +N L ++ + + +
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ P +++YN ++ + + GK ++ +F ++ + P +N M++G C+ + A
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ +++ G +P YN LI+ + G + ++KE+ G A +A T +
Sbjct: 556 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 615
Query: 181 CFRNRKYKLGLEILS 195
R K L++LS
Sbjct: 616 LHDGRLDKSFLDMLS 630
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 189 bits (480), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 211/443 (47%), Gaps = 39/443 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ I+ +C+ +L +M + G PD+VT +SL+ G + +S ++ L+D+M+EM
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD +++ +L+H LF K EA + M+ P T+ ++NGLCK D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + + ++K ++V YN +I GLCK + A + E+ + G P+ TY++++ C
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ +LS M + + + +I AFVK G+L EA ++M+ + D
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 241 I-----------------------------------VSYNTLINLYCKEGKLEAAYLLLD 265
I V+Y+TLI +CK ++E L
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM ++G + T+T LI G +A + A++ + M +G N+ YN ++D L K+G
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
K+ A+ VFE ++ D +TY+ M+ +CKA ++ +L + GV A
Sbjct: 483 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYN 542
Query: 382 AVVDGLRHSGCRREAKKIQSKIR 404
++ G G + EA + K++
Sbjct: 543 TMISGFCRKGSKEEADSLLKKMK 565
Score = 181 bits (459), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 186/355 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ D ++L +M + I DVV YN++I G + + +L+L EM G
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV++Y+SL+ CL G+ +A+R+ DMI + P TF+ +++ K A
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + K P++ TY+ LI G C RL A+ + + + PN +TY+T++K
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ + G+E+ M ++G + Y T+I F + A +QMV+ GV +I
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 468
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN L++ CK GKL A ++ + +++ E D YT+ I+I+G+CKAG ++
Sbjct: 469 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAK 356
++ G N+ AYN ++ + G + A ++ + M+ S + L +A+
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRAR 583
Score = 155 bits (392), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 193/394 (48%), Gaps = 4/394 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + F+ ++ +M+ GIS D+ TY+ I R S LS +L +L +M+++G
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ + +SL++ + +A + M+ P T TF +++GL + A+
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P+LVTY ++ GLCK G + A +LK++ + + Y TI+
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + L + + M KG D F Y ++I+ GR +A+ + M+ + ++
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+++ LI+ + KEGKL A L DEM K+ + D +T++ LI+G C + A+ E
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M N+ Y+ ++ K +++ + +F M V ++ TY++++H +A+
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+A + + GV ++DGL +G
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 161/336 (47%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C++ D + M GI PDV TY+SLI+ S + LL +M+E
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V ++++L+ + GK EA +++ +MI + P T++ ++NG C + D A
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
MF + P +VTY+ LIKG CKA R+ + +E+ G N +TYTT++
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ R + M G + Y ++ K G+L +A E + ++ DI
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 503
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN +I CK GK+E + L + +G + + +I G C+ G+ + A L+
Sbjct: 504 YTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKK 563
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M + G N YN ++ +DG + + + + M
Sbjct: 564 MKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 166/330 (50%), Gaps = 1/330 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + + +L+ M E I+P+VVT+++LI + L + L DEM++
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+++Y+SL++ + DEA +F+ MI D P T++ ++ G CK + + +
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + + G V VTY LI G +A A+ + K++ G PN +TY ++
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N K + + ++R D + Y +I K G++++ + + GV ++
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNV 538
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YNT+I+ +C++G E A LL +M++ G + T+ LI + G+ + + ++
Sbjct: 539 IAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKE 598
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
M GF + + + L DG++D +
Sbjct: 599 MRSCGFAGDASTIGLVTNML-HDGRLDKSF 627
Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 172/368 (46%), Gaps = 4/368 (1%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
+ D + M ++ P +V +N L++ + + + L ++M +GI D+++Y
Sbjct: 62 IKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTY 121
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
+ ++C + + A V M+ P T + +LNG C ++ +A+ + + +
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G+ P+ T+ LI GL + A ++ ++ G P+ +TY T++ + L
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
L +L M++ D Y T+I K + +A + +M G++ D+ +Y++LI+
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
C G+ A LL +M ++ + T + LID K G + A + M K D
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLL 365
++ Y+ +++ ++D A ++FE M KD F TYS+++ CKAKR+ +L
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 366 LSCLKSGV 373
+ G+
Sbjct: 422 REMSQRGL 429
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 147/327 (44%), Gaps = 39/327 (11%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K D+A +F DM+ P FN +L+ + K + + + +Q G +L TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
I I C+ +L A +L ++ G+ P+ +T ++++ +++ + ++ M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
GY D F + T+I + EA ++QMV G Q D+V+Y T++N CK G ++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
LL +MEK E D + +IDGLCK +
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKH----------------------------- 273
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
+D A+N+F M+ K D FTYSS++ LC R AS+LL ++ +
Sbjct: 274 ------MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327
Query: 377 KSAQKAVVDGLRHSGCRREAKKIQSKI 403
A++D G EA+K+ ++
Sbjct: 328 VVTFSALIDAFVKEGKLVEAEKLYDEM 354
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 118/245 (48%), Gaps = 4/245 (1%)
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
P+ + + ++ + K++L + + M+ G + D + Y I F + +L A
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+ +M+ G + DIV+ ++L+N YC ++ A L+D+M + G++ D +T T LI GL
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 344
A ++ M + G +L Y +V+ L K G ID A+++ + ME D
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
Y++++ LCK K + A L G+R +++ L + G +A ++ S +
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 405 MAKIS 409
KI+
Sbjct: 321 ERKIN 325
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 97/194 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + Q D + +M G+ P+++TYN L+ G +N L+ ++ + + +
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+++YN ++ + + GK ++ +F ++ ++P +N M++G C+ + A
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +++ G +P TYN LI+ + G + ++KE+ G A +A T +
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618
Query: 182 FRNRKYKLGLEILS 195
R K L++LS
Sbjct: 619 HDGRLDKSFLDMLS 632
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/152 (19%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ + ++ + + PD+ TYN +I G + + +L +
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK 532
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V +YN+++ + G +EA+ + + M P + T+N ++ ++ + +
Sbjct: 533 GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREAS 592
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
+ + ++ GF + T L+ + GRL
Sbjct: 593 AELIKEMRSCGFAGDASTIG-LVTNMLHDGRL 623
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ + G+ + + G+SP+V+ YN++I+G R + LL +M E
Sbjct: 508 IMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM----ICGDLTPCTATFNIMLNGLCKNRY 116
G P+ +YN+L+ + G + + + ++M GD + N++ +G +
Sbjct: 568 GPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSF 627
Query: 117 TD 118
D
Sbjct: 628 LD 629
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 186 bits (473), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 185/352 (52%), Gaps = 4/352 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ D +LN+M + I DVV Y+++I + + +L+L EM G
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV++Y+SL+ CL G+ +A+R+ DM+ + P TFN +++ K A
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + + P +VTYN LI G C RL A+ I + P+ +TY T++
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ +K G+E+ M R+G + Y T+I F + A +QMV+DGV +I
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YNTL++ CK GKLE A ++ + ++K E D YT+ I+ +G+CKAG ++
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS 510
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
++ G ++ AYN ++ K G + A +F M+ + DS TY++++
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 206/443 (46%), Gaps = 39/443 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ IL +M + G P +VT NSL+ G + +S ++ L+D+M+EM
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN------ 114
G PD ++ +L+H LFQ K EA + + M+ P T+ ++NGLCK
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 115 -----------------------------RYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
R+ D+AL +F + G P++ TY+ LI
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LC GR A +L ++ + PN +T+ +++ + K ++ M ++ +
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
Y ++I F RL EA MV+ D+V+YNTLIN +CK K+ L
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
+M ++G + T+T LI G +A + A++ + M G N+ YN ++D L K+G
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
K++ A+ VFE ++ D +TY+ M +CKA ++ L S GV+ A
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524
Query: 382 AVVDGLRHSGCRREAKKIQSKIR 404
++ G G + EA + K++
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMK 547
Score = 166 bits (419), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 166/327 (50%), Gaps = 1/327 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + + +L+ M E I+P+VVT+NSLI + L + L DEM++
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P++ +YNSL++ + DEA ++F M+ D P T+N ++NG CK + + +
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + + G V VTY LI G +A A+ + K++ G PN +TY T++
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N K + + + +++ D + Y + K G++++ D + GV+ D+
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDV 520
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YNT+I+ +CK+G E AY L +M++ G D T+ LI + G+ + ++
Sbjct: 521 IAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKE 580
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKID 328
M F + Y + D L DG++D
Sbjct: 581 MRSCRFAGDASTYGLVTDML-HDGRLD 606
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 195/411 (47%), Gaps = 4/411 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + FD + +M G+S ++ TYN +I R S LS +L +L +M+++G
Sbjct: 71 LLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLG 130
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + + NSL++ + EA + M+ P T TF +++GL ++ A+
Sbjct: 131 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 190
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P+LVTY +I GLCK G A +L ++ + + Y+T++
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R L + + M KG D F Y ++I+ GR +A+ + M+ + ++
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++N+LI+ + KEGKL A L DEM ++ + + T+ LI+G C + A+
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M ++ YN +++ K K+ + +F M V ++ TY++++H +A
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+A + + GV ++DGL +G +A + ++ +K+
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 170/368 (46%), Gaps = 4/368 (1%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
+ D + M ++ P +V ++ L++ + + ++M +G+ ++++Y
Sbjct: 44 LKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTY 103
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N +++CL + + A + M+ P T N +LNG C A+ + + +
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G+ P+ VT+ L+ GL + + A +++ + G P+ +TY ++ + + L
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
L +L+ M++ D Y TVI + K + +A + +M G++ D+ +Y++LI+
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
C G+ A LL +M ++ + T LID K G + A + M + D
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLL 365
N+ YN +++ ++D A +F M KD TY+++++ CKAK++ +L
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 366 LSCLKSGV 373
+ G+
Sbjct: 404 RDMSRRGL 411
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 96/194 (49%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + Q D + +M G+ P+++TYN+L+ G +N L ++ + + + +
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+++YN + + + GK ++ +F + + P +N M++G CK + A
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F +++ G +P+ TYN LI+ + G + ++KE+ A +A TY +
Sbjct: 541 TLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600
Query: 182 FRNRKYKLGLEILS 195
R K LE+LS
Sbjct: 601 HDGRLDKGFLEVLS 614
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 133/290 (45%), Gaps = 10/290 (3%)
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 183
F GL G+ E ++ N L+ +L A + E+ S P+ + ++ ++ +
Sbjct: 24 FSGLSYDGY-REKLSRNALLHL-----KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAK 77
Query: 184 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 243
+K+ L + M+ G + + + Y +I + +L A + +M+ G IV+
Sbjct: 78 MKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVT 137
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
N+L+N +C ++ A L+D+M + G++ D T T L+ GL + A +E M
Sbjct: 138 LNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMV 197
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLP 359
G +L Y +++ L K G+ D A+N+ ME D YS+++ +LCK + +
Sbjct: 198 VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVD 257
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
A L G+R +++ L + G +A ++ S + KI+
Sbjct: 258 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 46/92 (50%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ + C+ + G+ + + G+ PDV+ YN++I+G + L + L +M E
Sbjct: 490 IMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
G PD +YN+L+ + G + + ++M
Sbjct: 550 GPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 186 bits (472), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 202/427 (47%), Gaps = 40/427 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI A C+ +L M G+ PD T+ +++ G L +L + ++M+E
Sbjct: 194 VLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEF 253
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD-LTPCTATFNIMLNGLCKNRYTDN 119
G S N ++H + G+ ++A Q+M D P TFN ++NGLCK + +
Sbjct: 254 GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKH 313
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A+ + + + G+ P++ TYN +I GLCK G ++ A +L ++ +PN +TY T++
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIS 373
Query: 180 ---------------------------CCFRN--------RKYKLGLEILSAMKRKGYTF 204
C F + R +++ +E+ M+ KG
Sbjct: 374 TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP 433
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D F Y +I + G+L EA + ++QM G +++YNTLI+ +CK K A +
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIF 493
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
DEME G + T+ LIDGLCK+ ++ A ++ M G + YN ++ +
Sbjct: 494 DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRG 553
Query: 325 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
G I A ++ ++M D TY +++ LCKA R+ ASKLL S G+ + A
Sbjct: 554 GDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAY 613
Query: 381 KAVVDGL 387
V+ GL
Sbjct: 614 NPVIQGL 620
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 192/375 (51%), Gaps = 5/375 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 59
+++ +C+ + + M + G PD T+N+L+ G + + +++++D ML+
Sbjct: 264 VIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ 323
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G PDV++YNS++ L +LG+ EA V MI D +P T T+N +++ LCK +
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A + R L G +P++ T+N LI+GLC R A + +E+ G P+ TY ++
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
K L +L M+ G Y T+I F K + +EA + ++M GV
Sbjct: 444 SLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSR 503
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ V+YNTLI+ CK ++E A L+D+M +G + DKYT+ L+ C+ G+IK A +
Sbjct: 504 NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIV 563
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ M G + ++ Y ++ L K G+++ A + S+++K Y+ ++ L +
Sbjct: 564 QAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRK 623
Query: 356 KRLPSASKLLLSCLK 370
++ A L L+
Sbjct: 624 RKTTEAINLFREMLE 638
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 193/436 (44%), Gaps = 41/436 (9%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-EMGIPPDVWSY 69
SFD IL M+ + T+ LI + L L ++D M+ E G+ PD Y
Sbjct: 98 SFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFY 157
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N +++ L M + P +TFN+++ LC+ A+ M +
Sbjct: 158 NRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPS 217
Query: 130 HGFVPELVTY-----------------------------------NILIKGLCKAGRLRT 154
+G VP+ T+ N+++ G CK GR+
Sbjct: 218 YGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVED 277
Query: 155 ARWILKELGDS-GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
A ++E+ + G P+ T+ T++ + K +EI+ M ++GY D + Y +VI
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ K+G +KEA + ++QM+T + V+YNTLI+ CKE ++E A L + +G
Sbjct: 338 SGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
D T LI GLC N + A E M G + + YN ++D L GK+D A+N+
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 334 FESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
+ ME+ + TY++++ CKA + A ++ GV ++DGL
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Query: 390 SGCRREAKKIQSKIRM 405
S +A ++ ++ M
Sbjct: 518 SRRVEDAAQLMDQMIM 533
Score = 138 bits (347), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 140/292 (47%), Gaps = 5/292 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGA--TRNSLLSCSLDLLDEMLE 59
LI C+ + + + GI PDV T+NSLI G TRN +++L +EM
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH--RVAMELFEEMRS 428
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
G PD ++YN L+ L GK DEA + + M T+N +++G CK T
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTRE 488
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A +F ++ HG VTYN LI GLCK+ R+ A ++ ++ G P+ TY +++
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT 548
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
R K +I+ AM G D Y T+I+ K GR++ A+ + + G+ L
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL 608
Query: 240 DIVSYNTLIN-LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 290
+YN +I L+ K EA L + +E+ D ++ I+ GLC G
Sbjct: 609 TPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 166/347 (47%), Gaps = 6/347 (1%)
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
P+ Y ++ L + G D+ ++ +DM T+TF I++ + D L +
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 124 FRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 182
+ + G P+ YN ++ L L+ ++ G P+ T+ ++K
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
R + + + +L M G D + TV+ +++ G L A EQMV G V
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQ-GFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
S N +++ +CKEG++E A + EM Q GF D+YT L++GLCKAG++K A ++
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKR 357
M + G+D ++ YN ++ L K G++ A+ V + M +D + TY++++ LCK +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A++L G+ +++ GL + R A ++ ++R
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 142/306 (46%), Gaps = 19/306 (6%)
Query: 107 MLNGLCKNRYTDNALRMFR-GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
+L+ L ALR+F +K F PE Y ++ L ++G + IL+++ S
Sbjct: 53 LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG-------YCTVIAAFVK 218
T+ +++ +++L EILS + + D FG Y ++ V
Sbjct: 113 RCEMGTSTFLILIESY---AQFELQDEILSVVD---WMIDEFGLKPDTHFYNRMLNLLVD 166
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
LK +M G++ D+ ++N LI C+ +L A L+L++M G D+ T
Sbjct: 167 GNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT 226
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
T ++ G + G++ GA E M + G + + N IV K+G+++ A+N + M
Sbjct: 227 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMS 286
Query: 339 VKDSF-----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 393
+D F T++++V+ LCKA + A +++ L+ G +V+ GL G
Sbjct: 287 NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346
Query: 394 REAKKI 399
+EA ++
Sbjct: 347 KEAVEV 352
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 185 bits (470), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 195/378 (51%), Gaps = 5/378 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL-LSCSLDLLDEMLE 59
+++ +Y + D +I++ + G P V++YN+++ R+ +S + ++ EMLE
Sbjct: 139 LVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLE 198
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ P+V++YN L+ G D A +F M P T+N +++G CK R D+
Sbjct: 199 SQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDD 258
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
++ R + G P L++YN++I GLC+ GR++ ++L E+ G++ + +TY T++K
Sbjct: 259 GFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIK 318
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
+ + L + + M R G T Y ++I + K G + A ++++QM G+
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCP 378
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
+ +Y TL++ + ++G + AY +L EM GF T+ LI+G C G ++ A L
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVL 438
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
E M + G ++ +Y+ ++ + +D A+ V M K D+ TYSS++ C+
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ 498
Query: 356 KRLPSASKLLLSCLKSGV 373
+R A L L+ G+
Sbjct: 499 RRTKEACDLYEEMLRVGL 516
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/401 (30%), Positives = 191/401 (47%), Gaps = 19/401 (4%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+L M G S D VTYN+LI G + +L + EML G+ P V +Y SL+H +
Sbjct: 297 VLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMC 356
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+ G + A M L P T+ +++G + Y + A R+ R + +GF P +V
Sbjct: 357 KAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV 416
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN LI G C G++ A +L+++ + G +P+ ++Y+T++ R+ L + M
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
KG D Y ++I F + R KEA D E+M+ G+ D +Y LIN YC EG L
Sbjct: 477 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDL 536
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR---LHLEYMNKIGFD------ 308
E A L +EM ++G D T+++LI+GL K + A+ L L Y + D
Sbjct: 537 EKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 596
Query: 309 ----SNLEAYNCI--VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 358
SN+E + + + G + A VFESM K D Y+ M+H C+A +
Sbjct: 597 IENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDI 656
Query: 359 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
A L +KSG + A+V L G E +
Sbjct: 657 RKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697
Score = 171 bits (434), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 196/391 (50%), Gaps = 6/391 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ M E+ +SP+V TYN LI G + +L L D+M G P+V +YN+L+
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
+L K D+ ++ + M L P ++N+++NGLC+ + + + G+ + V
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN LIKG CK G A + E+ G P+ ITYT+++ + +E L M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
+ +G + Y T++ F + G + EA + +M +G +V+YN LIN +C GK+
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNC 316
E A +L++M+++G D +++ ++ G C++ ++ A R+ E + K G + Y+
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK-GIKPDTITYSS 490
Query: 317 IVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++ + + A +++E M D FTY+++++ C L A +L ++ G
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
V +++GL REAK++ K+
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 180/355 (50%), Gaps = 6/355 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ D G+ +L M G+ P++++YN +I G R + +L EM G
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
D +YN+L+ + G +A + +M+ LTP T+ +++ +CK + A+
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ G P TY L+ G + G + A +L+E+ D+G +P+ +TY ++
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K + + +L MK KG + D Y TV++ F + + EA +MV G++ D
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLE 300
++Y++LI +C++ + + A L +EM + G D++T+T LI+ C G+++ A +LH E
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHN 351
+ K G ++ Y+ +++ L K + A + +F V TY +++ N
Sbjct: 546 MVEK-GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 149/343 (43%), Gaps = 40/343 (11%)
Query: 101 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV----------------------- 137
++ F++++ + D AL + Q HGF+P ++
Sbjct: 134 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193
Query: 138 -------------TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
TYNILI+G C AG + A + ++ G PN +TY T++ +
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
RK G ++L +M KG + Y VI + GR+KE + + +M G LD V+Y
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
NTLI YCKEG A ++ EM + G T+T LI +CKAGN+ A L+ M
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPS 360
G N Y +VD + G ++ A V M TY+++++ C ++
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A +L + G+ + V+ G S EA +++ ++
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Score = 108 bits (269), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 124/286 (43%), Gaps = 15/286 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ +C+ D + M E GI PD +TY+SLI G + DL +EML +G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+PPD ++Y +L++ G ++A ++ +M+ + P T+++++NGL K T A
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 122 RMFRGLQKHGFVPELVTYNILI---------------KGLCKAGRLRTARWILKELGDSG 166
R+ L VP VTY+ LI KG C G + A + + +
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN 635
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
H P+ Y ++ R + + M + G+ ++ A K G++ E
Sbjct: 636 HKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELN 695
Query: 227 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
+ ++ + L+ + +EG ++ +L EM K GF
Sbjct: 696 SVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGF 741
Score = 78.6 bits (192), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 15/222 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-EM 60
LI+AYC + + N M E G+ PDVVTY+ LI G + S + LL ++ E
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585
Query: 61 GIPPDVWSYNSLMHC--------------LFQLGKPDEANRVFQDMICGDLTPCTATFNI 106
+P DV + + +C G EA++VF+ M+ + P +NI
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNI 645
Query: 107 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 166
M++G C+ A +++ + K GF+ VT L+K L K G++ ++ + S
Sbjct: 646 MIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSC 705
Query: 167 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
A +++ R + L++L+ M + G+ +G
Sbjct: 706 ELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 203/407 (49%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ YC ++++M E G PD +T+ +LI G ++ S ++ L+D M++ G
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P++ +Y +++ L + G D A + M + FN +++ LCK R+ D+AL
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ ++ G P +VTY+ LI LC GR A +L ++ + PN +T+ ++
Sbjct: 281 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 340
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K+ ++ M ++ D F Y +++ F RL +A E MV+ D+
Sbjct: 341 VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDV 400
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTLI +CK ++E L EM +G D T+T LI GL G+ A+ +
Sbjct: 401 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVK-DSFTYSSMVHNLCKAKR 357
M G ++ Y+ ++D L +GK++ A+ VF+ M E+K D + Y++M+ +CKA +
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ L S GV+ ++ GL +EA + K++
Sbjct: 521 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Score = 173 bits (438), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 180/353 (50%), Gaps = 4/353 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++ C+ D +LN+M A I DVV +N++I + + +L+L EM
Sbjct: 230 VVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 289
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+V +Y+SL+ CL G+ +A+++ DMI + P TFN +++ K A
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 349
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + K P++ TYN L+ G C RL A+ + + + P+ +TY T++K
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++++ + G E+ M +G D Y T+I G A +QMV+DGV D
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++Y+ L++ C GKLE A + D M+K + D Y +T +I+G+CKAG +
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 529
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
++ G N+ YN ++ L + A + + M+ + +S TY++++
Sbjct: 530 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 154 bits (390), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 167/329 (50%), Gaps = 1/329 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + + +L+ M E I+P++VT+N+LI + + L D+M++
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+++YNSL++ + D+A ++F+ M+ D P T+N ++ G CK++ ++
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + G V + VTY LI+GL G A+ + K++ G P+ +TY+ ++
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N K + LE+ M++ D + Y T+I K G++ + D + GV+ ++
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 540
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNT+I+ C + L+ AY LL +M++ G + T+ LI + G+ + +
Sbjct: 541 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIRE 600
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
M F + + + L DG++D +
Sbjct: 601 MRSCRFVGDASTIGLVANML-HDGRLDKS 628
Score = 144 bits (364), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 194/411 (47%), Gaps = 4/411 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + FD ++ +M+ I + TYN LI R S +S +L LL +M+++G
Sbjct: 91 LLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLG 150
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + + +SL++ + +A + M+ P T TF +++GL + A+
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P LVTY +++ GLCK G A +L ++ + + + + TI+
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 270
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R L + M+ KG + Y ++I+ GR +A+ + M+ + ++
Sbjct: 271 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++N LI+ + KEGK A L D+M K+ + D +T+ L++G C + A+ E+
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M ++ YN ++ K +++ +F M V D+ TY++++ L
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+A K+ + GV ++DGL ++G +A ++ ++ ++I
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 173/375 (46%), Gaps = 4/375 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P +V +N L++ + + L ++M + I +++YN L++C + + A +
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
M+ P T + +LNG C + +A+ + + + G+ P+ +T+ LI GL
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
+ A ++ + G PN +TY ++ + L L +L+ M+ D
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
+ T+I + K + +A + ++M T G++ ++V+Y++LI+ C G+ A LL +M
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
++ + T LID K G A + M K D ++ YN +V+ ++D
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 329 HAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 384
A +FE M KD F TY++++ CK+KR+ ++L G+ ++
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 385 DGLRHSGCRREAKKI 399
GL H G A+K+
Sbjct: 443 QGLFHDGDCDNAQKV 457
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 142/324 (43%), Gaps = 39/324 (12%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K D+A +F M+ P FN +L+ + K + D + + +Q+ V L TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
ILI C+ ++ A +L ++ G+ P+ +T ++++ ++ + ++ M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG----- 255
GY D + T+I + EA +++MV G Q ++V+Y ++N CK G
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 256 -----KLEAAYL-------------------------LLDEMEKQGFECDKYTHTILIDG 285
K+EAA + L EME +G + T++ LI
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 341
LC G A L M + + NL +N ++D K+GK A +++ M + D
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 342 SFTYSSMVHNLCKAKRLPSASKLL 365
FTY+S+V+ C RL A ++
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMF 388
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 88/183 (48%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D + +M G+ PD++TY+ L+ G N L +L++ D M + I D++ Y ++
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ + + GK D+ +F + + P T+N M++GLC R A + + +++ G
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+P TYN LI+ + G + +++E+ +A T + R K L+
Sbjct: 572 LPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLD 631
Query: 193 ILS 195
+LS
Sbjct: 632 MLS 634
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 127/308 (41%), Gaps = 40/308 (12%)
Query: 106 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
I+ NGL + D+A+ +F G+ K +P +V +N L+ + K + + +++
Sbjct: 56 ILRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
TY ++ C R + L L +L M + GY
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGY----------------------- 151
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ IV+ ++L+N YC ++ A L+D+M + G+ D T T LI G
Sbjct: 152 ------------EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 199
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 341
L A ++ M + G NL Y +V+ L K G D A+N+ ME D
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 259
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
+++++ +LCK + + A L G+R +++ L G +A ++ S
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 402 KIRMAKIS 409
+ KI+
Sbjct: 320 DMIEKKIN 327
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ D G+ + + G+ P+VVTYN++I+G LL + LL +M E G
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM----ICGDLTPCTATFNIMLNGLCKNRYT 117
P+ +YN+L+ + G + + ++M GD + N++ +G +
Sbjct: 571 PLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFL 630
Query: 118 D 118
D
Sbjct: 631 D 631
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 183 bits (464), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 209/443 (47%), Gaps = 39/443 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ +L +M + G PD+VT NSL+ G + +S ++ L+ +M+EM
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN------ 114
G PD +++N+L+H LF+ + EA + M+ P T+ I++NGLCK
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 115 -----------------------------RYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+ ++AL +F + G P +VTYN LI+
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LC GR A +L ++ + PN +T++ ++ + K ++ M ++ D
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
F Y ++I F RL EA E M++ ++V+YNTLI +CK +++ L
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM ++G + T+T LI G +A A++ + M G ++ Y+ ++D L +G
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
K++ A+ VFE ++ D +TY+ M+ +CKA ++ L S GV+
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540
Query: 382 AVVDGLRHSGCRREAKKIQSKIR 404
++ G G + EA + +++
Sbjct: 541 TMMSGFCRKGLKEEADALFREMK 563
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 184/354 (51%), Gaps = 4/354 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++ C+ D ++L +M + I P VV YN++I ++ +L+L EM
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+V +YNSL+ CL G+ +A+R+ DMI + P TF+ +++ K A
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+++ + K P++ TY+ LI G C RL A+ + + + PN +TY T++K
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 405
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ ++ G+E+ M ++G + Y T+I F + A +QMV+DGV D
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD 465
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++Y+ L++ C GK+E A ++ + +++ E D YT+ I+I+G+CKAG ++
Sbjct: 466 IMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVH 350
++ G N+ Y ++ + G + A +F M+ + DS TY++++
Sbjct: 526 SLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR 579
Score = 164 bits (414), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 194/394 (49%), Gaps = 4/394 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + FD ++ +M+ GIS ++ TY+ LI R S LS +L +L +M+++G
Sbjct: 87 LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLG 146
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ + NSL++ + +A + M+ P + TFN +++GL ++ A+
Sbjct: 147 YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P+LVTY I++ GLCK G + A +LK++ P + Y TI+
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ L + + M KG + Y ++I GR +A+ + M+ + ++
Sbjct: 267 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 326
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+++ LI+ + KEGKL A L DEM K+ + D +T++ LI+G C + A+ E
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 386
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M N+ YN ++ K ++D + +F M V ++ TY++++H +A+
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+A + + GV ++DGL ++G
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 143/290 (49%), Gaps = 4/290 (1%)
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
D+A+ +F + K P +V ++ L+ + K + + +++ + G + N TY+ +
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ C R + L L +L+ M + GY D +++ F R+ +A + QMV G
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
Q D ++NTLI+ + + A L+D M +G + D T+ I+++GLCK G+I A
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 353
L+ M + + + YN I+D L ++ A+N+F M+ K + TY+S++ LC
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
R AS+LL ++ + A++D G EA+K+ ++
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Score = 114 bits (286), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 134/297 (45%), Gaps = 4/297 (1%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K D+A +F DM+ P F+ +L+ + K D + + +Q G L TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
ILI C+ +L A +L ++ G+ P+ +T +++ + + ++ M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
GY D F + T+I + R EA +++MV G Q D+V+Y ++N CK G ++ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
LL +ME+ E + +ID LC N+ A M+ G N+ YN ++
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
L G+ A + M + + T+S+++ K +L A KL +K +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C + + ++ + + PD+ TYN +I G + + DL +
Sbjct: 471 ILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 530
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V +Y ++M + G +EA+ +F++M P + T+N ++ ++ +
Sbjct: 531 GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAAS 590
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
+ R ++ FV + T L+ + GRL
Sbjct: 591 AELIREMRSCRFVGDASTIG-LVTNMLHDGRL 621
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 58/124 (46%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ + G+ + + G+ P+VVTY ++++G R L + L EM E
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD +YN+L+ + G + + ++M +T ++ N L R +
Sbjct: 566 GPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDGRLDKSF 625
Query: 121 LRMF 124
L+M
Sbjct: 626 LKML 629
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 206/443 (46%), Gaps = 39/443 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ +L +M + G P +VT +SL+ G +S ++ L+D+M+EM
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN------ 114
G PD ++ +L+H LF K EA + M+ P T+ +++NGLCK
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 115 -----------------------------RYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
R+ D+AL +F ++ G P ++TY+ LI
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LC R A +L ++ + PN +T+ ++ + K ++ M ++ D
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
F Y ++I F RL EA E M++ ++V+YNTLIN +CK +++ L
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM ++G + T+T LI G +A + A++ + M G N+ YN ++D L K+G
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Query: 326 KIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
K++ A+ VFE ++ +TY+ M+ +CKA ++ L S GV+
Sbjct: 485 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYN 544
Query: 382 AVVDGLRHSGCRREAKKIQSKIR 404
++ G G + EA + K+R
Sbjct: 545 TMISGFCRKGLKEEADALFRKMR 567
Score = 161 bits (408), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 202/411 (49%), Gaps = 4/411 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + FD ++ +M+ GIS ++ TYN LI R S +S +L LL +M+++G
Sbjct: 91 LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 150
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + + +SL++ + +A + M+ P T TF +++GL + A+
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P LVTY +++ GLCK G + A +L ++ + N + Y+T++
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R L + + M+ KG + Y ++I+ R +A+ + M+ + ++
Sbjct: 271 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNV 330
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++N LI+ + KEGKL A L DEM K+ + D +T++ LI+G C + A+ E
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 390
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M N+ YN +++ K +ID + +F M V ++ TY++++H +A+
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+A + + GV ++DGL +G +A + ++ +K+
Sbjct: 451 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 141/270 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + + +L+ M E I+P+VVT+N+LI + L + L DEM++
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+++Y+SL++ + DEA +F+ MI D P T+N ++NG CK + D +
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + + G V VTY LI G +A A+ + K++ G PN +TY T++
Sbjct: 421 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 480
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N K + + + ++R + Y +I K G++++ D + GV+ D+
Sbjct: 481 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDV 540
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
+ YNT+I+ +C++G E A L +M + G
Sbjct: 541 IIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 147/324 (45%), Gaps = 39/324 (12%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K D+A +F M+ P FN +L+ + K + D + + +Q+ G L TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
ILI C+ ++ A +L ++ G+ P+ +T ++++ ++ + ++ M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
GY D + T+I + EA +++MV G Q ++V+Y ++N CK G ++ A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCK------AGNI------KGARLH---------- 298
+ LL++ME E + ++ +ID LCK A N+ KG R +
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 299 -------------LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 341
L M + + N+ +N ++D K+GK+ A +++ M + D
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 342 SFTYSSMVHNLCKAKRLPSASKLL 365
FTYSS+++ C RL A +
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMF 388
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 90/172 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ +C+ D G + M + G+ + VTY +LI G + + + +M+ G
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++ +YN+L+ L + GK ++A VF+ + + P T+NIM+ G+CK ++
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 525
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 173
+F L G P+++ YN +I G C+ G A + +++ + G P++ T
Sbjct: 526 DLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 38.5 bits (88), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ + G+ + + G+ PDV+ YN++I+G R L + L +M E
Sbjct: 510 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRED 569
Query: 61 GIPPD 65
G PD
Sbjct: 570 GPLPD 574
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 189/355 (53%), Gaps = 8/355 (2%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
+++RM E G PDVVTYNS++ G R+ S +LDLL +M E + DV++Y++++ L
Sbjct: 179 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 238
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK-NRYTDNALRMFRGLQKHGFVPE 135
+ G D A +F++M + T+N ++ GLCK ++ D AL + + + VP
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL-LLKDMVSREIVPN 297
Query: 136 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEIL 194
++T+N+L+ K G+L+ A + KE+ G +PN ITY T+M C +NR + +L
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN-NML 356
Query: 195 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
M R + D + ++I + + R+ + + G+ + V+Y+ L+ +C+
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
GK++ A L EM G D T+ IL+DGLC G ++ A E + K D + Y
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 315 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
I++ + K GK++ A N+F S+ K + TY+ M+ LCK L A+ LL
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 206/408 (50%), Gaps = 4/408 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ +C+ Y++L ++ + G PD T+N+LI G +S ++ L+D M+E
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +YNS+++ + + G A + + M ++ T++ +++ LC++ D A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ +F+ ++ G +VTYN L++GLCKAG+ +LK++ PN IT+ ++
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + E+ M +G + + Y T++ + RL EA + ++ MV + D
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV++ +LI YC +++ + + K+G + T++IL+ G C++G IK A +
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAK 356
M G ++ Y ++D L +GK++ A+ +FE ++ Y++++ +CK
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++ A L S GV+ ++ GL G EA + K+
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 169/337 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID+ C+ DA ++ M GI VVTYNSL+ G + + LL +M+
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V ++N L+ + GK EAN ++++MI ++P T+N +++G C A
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + ++ P++VT+ LIKG C R+ + + + G NA+TY+ +++
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ K KL E+ M G D Y ++ G+L++A + E + + L I
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V Y T+I CK GK+E A+ L + +G + + T+T++I GLCK G++ A + L
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
M + G N YN ++ +DG + + + E M+
Sbjct: 534 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 149/286 (52%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D + + + M GISP+++TYN+L+ G + LS + ++LD M+
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PD+ ++ SL+ + + D+ +VF+++ L T++I++ G C++ A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ + HG +P+++TY IL+ GLC G+L A I ++L S + YTTI++
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + + ++ KG + Y +I+ K G L EA + +M DG +
Sbjct: 483 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 542
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 286
+YNTLI + ++G L A+ L++EM+ GF D + ++ID L
Sbjct: 543 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 190/407 (46%), Gaps = 18/407 (4%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D + M + P +V ++ + R + LD ++ GI ++++ N +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
++C + K A V ++ P T TFN ++ GL A+ + + ++G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P++VTYN ++ G+C++G A +L+++ + + TY+TI+ R+ +
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ M+ KG Y +++ K G+ + ++ MV+ + +++++N L++++
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM--NK-----I 305
KEGKL+ A L EM +G + T+ L+DG C + A L+ M NK +
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 306 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 361
F S ++ Y C+V R +D + VF ++ V ++ TYS +V C++ ++ A
Sbjct: 370 TFTSLIKGY-CMVKR------VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 362 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+L + GV ++DGL +G +A +I ++ +K+
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 139/289 (48%), Gaps = 4/289 (1%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K D+A +FQ+MI P F+ + + + + + L + L+ +G + T N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
I+I C+ + A +L ++ G+ P+ T+ T++K F K + ++ M
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
G D Y +++ + G A D + +M V+ D+ +Y+T+I+ C++G ++AA
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
L EME +G + T+ L+ GLCKAG L L+ M N+ +N ++D
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
K+GK+ A +++ M + + TY++++ C RL A+ +L
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Score = 78.6 bits (192), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 94/195 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +CQ + M G+ PDV+TY L+ G N L +L++ +++ +
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ + Y +++ + + GK ++A +F + C + P T+ +M++GLCK A
Sbjct: 468 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ R +++ G P TYN LI+ + G L + +++E+ G + +A + ++
Sbjct: 528 NILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDM 587
Query: 181 CFRNRKYKLGLEILS 195
K L++LS
Sbjct: 588 LLSGELDKSFLDMLS 602
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 198/410 (48%), Gaps = 12/410 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ YC+ S + I+ M++ + PD+ TYN LI G + L+L+D M +
Sbjct: 281 LVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLK 340
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PDV +YN+L+ F+LG EA ++ + M + T NI L LCK +
Sbjct: 341 LQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVT 400
Query: 122 RMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
R + L HGF P++VTY+ LIK K G L A +++E+G G N IT TI+
Sbjct: 401 RKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDA 460
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ RK +L++ ++G+ D Y T+I F + ++++A + ++M +
Sbjct: 461 LCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPT 520
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ ++N+LI C GK E A DE+ + G D T +I G CK G ++ A E
Sbjct: 521 VSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKA---FE 577
Query: 301 YMN---KIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLC 353
+ N K F + N +++ L K+G + A+N F E EV D+ TY++M+ C
Sbjct: 578 FYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFC 636
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
K K+L A LL + G+ + + + L G E ++ K
Sbjct: 637 KDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF 686
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 202/432 (46%), Gaps = 41/432 (9%)
Query: 6 YCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-EMGIPP 64
Y S + + + M + G+S +V T+N L+ G L +L +L+ M+ E + P
Sbjct: 179 YPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNP 238
Query: 65 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 124
D +YN+++ + + G+ + + DM L P T+N ++ G CK A ++
Sbjct: 239 DNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV 298
Query: 125 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF-- 182
+++ +P+L TYNILI GLC AG +R ++ + P+ +TY T++ CF
Sbjct: 299 ELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFEL 358
Query: 183 ----RNRK----------------YKLGLEIL------SAMKRK--------GYTFDGFG 208
RK + + L+ L A+ RK G++ D
Sbjct: 359 GLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVT 418
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y T+I A++K+G L A + M +M G++++ ++ NT+++ CKE KL+ A+ LL+
Sbjct: 419 YHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAH 478
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
K+GF D+ T+ LI G + ++ A + M K+ + +N ++ L GK +
Sbjct: 479 KRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTE 538
Query: 329 HAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 384
A+ F ES + D T++S++ CK R+ A + +K + ++
Sbjct: 539 LAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILL 598
Query: 385 DGLRHSGCRREA 396
+GL G +A
Sbjct: 599 NGLCKEGMTEKA 610
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 190/398 (47%), Gaps = 9/398 (2%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATR---NSLLSCSLDLLDEMLE 59
+ AY I +M + P+++T N+L+ G R + +S + ++ D+M++
Sbjct: 138 LSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVK 197
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG-DLTPCTATFNIMLNGLCKNRYTD 118
+G+ +V ++N L++ GK ++A + + M+ + P T+N +L + K
Sbjct: 198 IGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLS 257
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
+ + ++K+G VP VTYN L+ G CK G L+ A I++ + + P+ TY ++
Sbjct: 258 DLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILI 317
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
+ GLE++ AMK D Y T+I ++G EA MEQM DGV+
Sbjct: 318 NGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVK 377
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+ V++N + CKE K EA + E+ + GF D T+ LI K G++ GA
Sbjct: 378 ANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALE 437
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 353
+ M + G N N I+D L K+ K+D A N+ S + D TY +++
Sbjct: 438 MMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFF 497
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ +++ A ++ K + S +++ GL H G
Sbjct: 498 REEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHG 535
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 111/246 (45%), Gaps = 24/246 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + + + + + M++ I+P V T+NSLI G + +++ DE+ E G
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESG 551
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD ++NS++ + G+ ++A + + I P T NI+LNGLCK T+ AL
Sbjct: 552 LLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F L + V + VTYN +I CK +L+ A +L E+ + G P+ TY + +
Sbjct: 612 NFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLL 670
Query: 182 FRNRKYKLGLEILS-------AMKR----------------KGYTFDGFGYCTVIAAFVK 218
+ K E+L +MKR + + Y VI
Sbjct: 671 MEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCS 730
Query: 219 IGRLKE 224
GRLKE
Sbjct: 731 RGRLKE 736
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK---AGNIKGARLHLE 300
++ ++ Y EGK A + +M + + + T L+ GL + + +I AR +
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFD 193
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM--EVK---DSFTYSSMVHNLCKA 355
M KIG N++ +N +V+ +GK++ A+ + E M E K D+ TY++++ + K
Sbjct: 194 DMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKK 253
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
RL +LLL K+G+ + +V G G +EA +I ++ +
Sbjct: 254 GRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNV 306
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 205/399 (51%), Gaps = 8/399 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C +++RM E G P ++T N+L+ G N +S ++ L+D M+E G
Sbjct: 164 LLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETG 223
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y +++ + + G+ A + + M ++ ++I+++GLCK+ DNA
Sbjct: 224 FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAF 283
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ GF +++TYN LI G C AGR +L+++ +PN +T++ ++
Sbjct: 284 NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSF 343
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + ++L M ++G + Y ++I F K RL+EA ++ M++ G DI
Sbjct: 344 VKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI 403
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+++N LIN YCK +++ L EM +G + T+ L+ G C++G ++ A+ +
Sbjct: 404 MTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQE 463
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M ++ +Y ++D L +G+++ A+ +F +E D Y ++H +C A +
Sbjct: 464 MVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASK 523
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ A L S GV++ A ++ L CR+++
Sbjct: 524 VDDAWDLFCSLPLKGVKLDARAYNIMISEL----CRKDS 558
Score = 171 bits (433), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 196/379 (51%), Gaps = 4/379 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ +C+ ++ + ++ + G PD V +N+L+ G +S +L+L+D M+EM
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P + + N+L++ L GK +A + M+ P T+ +LN +CK+ T A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + R +++ + V Y+I+I GLCK G L A + E+ G + ITY T++
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ G ++L M ++ + + + +I +FVK G+L+EA +++M+ G+ +
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++YN+LI+ +CKE +LE A ++D M +G + D T ILI+G CKA I
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M+ G +N YN +V + GK++ A +F+ M + D +Y ++ LC
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487
Query: 357 RLPSASKLLLSCLKSGVRI 375
L A ++ KS + +
Sbjct: 488 ELEKALEIFGKIEKSKMEL 506
Score = 161 bits (408), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 195/438 (44%), Gaps = 39/438 (8%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
+ D + M ++ P V+ +N L + + L L +M GI +++
Sbjct: 67 IKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTL 126
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
+ +++C + K A ++ P T FN +LNGLC AL + + +
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G P L+T N L+ GLC G++ A ++ + ++G PN +TY ++ ++ + L
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+E+L M+ + D Y +I K G L A + +M G + DI++YNTLI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 250 LYC-----------------------------------KEGKLEAAYLLLDEMEKQGFEC 274
+C KEGKL A LL EM ++G
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
+ T+ LIDG CK ++ A ++ M G D ++ +N +++ K +ID + +F
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 335 ESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
M ++ ++ TY+++V C++ +L A KL + VR + K ++DGL +
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 391 GCRREAKKIQSKIRMAKI 408
G +A +I KI +K+
Sbjct: 487 GELEKALEIFGKIEKSKM 504
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 165/329 (50%), Gaps = 1/329 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C +D G +L M + ISP+VVT++ LI + L + LL EM++ G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+ +YNSL+ + + +EA ++ MI P TFNI++NG CK D+ L
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGL 423
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + G + VTYN L++G C++G+L A+ + +E+ P+ ++Y ++
Sbjct: 424 ELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N + + LEI +++ D Y +I ++ +A D + GV+LD
Sbjct: 484 CDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDA 543
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN +I+ C++ L A +L +M ++G D+ T+ ILI + A +E
Sbjct: 544 RAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEE 603
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
M GF +++ +++ L G++D +
Sbjct: 604 MKSSGFPADVSTVKMVINMLSS-GELDKS 631
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 180/391 (46%), Gaps = 39/391 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ S D + + N M G D++TYN+LI G LL +M++
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P+V +++ L+ + GK EA+++ ++M+ + P T T+N +++G CK + A
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++M + G P+++T+NILI G CKA R+ + +E+ G N +TY T+++
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ- 446
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
G+C + G+L+ A ++MV+ V+ D
Sbjct: 447 ---------------------------GFC-------QSGKLEVAKKLFQEMVSRRVRPD 472
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IVSY L++ C G+LE A + ++EK E D + I+I G+C A + A
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFC 532
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAK 356
+ G + AYN ++ L + + A +F M D TY+ ++
Sbjct: 533 SLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDD 592
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+A++L+ SG S K V++ L
Sbjct: 593 DATTAAELIEEMKSSGFPADVSTVKMVINML 623
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 179 bits (455), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 202/407 (49%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ YC ++++M E G PD +T+ +LI G ++ S ++ L+D M++ G
Sbjct: 86 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 145
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P++ +Y +++ L + G D A + M + FN +++ LCK R+ D+AL
Sbjct: 146 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F+ ++ G P +VTY+ LI LC GR A +L ++ + PN +T+ ++
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 265
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K+ ++ M ++ D F Y ++I F RL +A E MV+ D+
Sbjct: 266 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL 325
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YNTLI +CK ++E L EM +G D T+T LI GL G+ A+ +
Sbjct: 326 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVK-DSFTYSSMVHNLCKAKR 357
M G ++ Y+ ++D L +GK++ A+ VF+ M E+K D + Y++M+ +CKA +
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 445
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ L S GV+ ++ GL +EA + K++
Sbjct: 446 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 179/353 (50%), Gaps = 4/353 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++ C+ D + +LN+M A I DVV +N++I + + +L+L EM
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI P+V +Y+SL+ CL G+ +A+++ DMI + P TFN +++ K A
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + K P++ TYN LI G C RL A+ + + + P+ TY T++K
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++++ + G E+ M +G D Y T+I G A +QMV+DGV D
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++Y+ L++ C GKLE A + D M+K + D Y +T +I+G+CKAG +
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
++ G N+ YN ++ L + A + + M+ + DS TY++++
Sbjct: 455 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Score = 154 bits (390), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 167/329 (50%), Gaps = 1/329 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + + +L+ M E I+P++VT+N+LI + + L D+M++
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD+++YNSL++ + D+A ++F+ M+ D P T+N ++ G CK++ ++
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 345
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + G V + VTY LI+GL G A+ + K++ G P+ +TY+ ++
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N K + LE+ M++ D + Y T+I K G++ + D + GV+ ++
Sbjct: 406 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 465
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNT+I+ C + L+ AY LL +M++ G D T+ LI + G+ + +
Sbjct: 466 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 525
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
M F + + + L DG++D +
Sbjct: 526 MRSCRFVGDASTIGLVANML-HDGRLDKS 553
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 199/411 (48%), Gaps = 4/411 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + FD ++ +M+ GIS ++ TYN LI R S +S +L LL +M+++G
Sbjct: 16 LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 75
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + + +SL++ + +A + M+ P T TF +++GL + A+
Sbjct: 76 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P LVTY +++ GLCK G + A +L ++ + + + + TI+
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R L + M+ KG + Y ++I+ GR +A+ + M+ + ++
Sbjct: 196 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 255
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++N LI+ + KEGK A L D+M K+ + D +T+ LI+G C + A+ E+
Sbjct: 256 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 315
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M +L+ YN ++ K +++ +F M V D+ TY++++ L
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 375
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+A K+ + GV ++DGL ++G +A ++ ++ ++I
Sbjct: 376 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Score = 135 bits (340), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 177/376 (47%), Gaps = 6/376 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P + +N L++ + + L ++M +GI ++++YN L++C + + A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
M+ P T + +LNG C + +A+ + + + G+ P+ +T+ LI GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
+ A ++ + G PN +TY ++ + L +L+ M+ D
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
+ T+I + K + +A + ++M T G++ ++V+Y++LI+ C G+ A LL +M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 269 KQGFECDKYTHTILIDGLCKAGN-IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
++ + T LID K G ++ +LH + M K D ++ YN +++ ++
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLH-DDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 328 DHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
D A +FE M KD F TY++++ CK+KR+ ++L G+ +
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 384 VDGLRHSGCRREAKKI 399
+ GL H G A+K+
Sbjct: 367 IQGLFHDGDCDNAQKV 382
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 133/275 (48%), Gaps = 4/275 (1%)
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+P + +N L+ + K + + +++ G + N TY ++ C R + L L
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+L M + GY +++ + R+ +A ++QMV G + D +++ TLI+
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 253 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 312
K A L+D M ++G + + T+ ++++GLCK G+I A L M ++++
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 313 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 368
+N I+D L K +D A+N+F+ ME K + TYSS++ LC R AS+LL
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 369 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
++ + A++D G EA+K+ +
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 281
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 114/245 (46%), Gaps = 4/245 (1%)
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
P+ + ++ + +K+ L + + M+R G + + + Y +I F + ++ A
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+ +M+ G + IV+ ++L+N YC ++ A L+D+M + G+ D T T LI GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 344
A ++ M + G NL Y +V+ L K G ID A N+ ME D
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+++++ +LCK + + A L G+R +++ L G +A ++ S +
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 405 MAKIS 409
KI+
Sbjct: 248 EKKIN 252
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 89/183 (48%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D + +M G+ PD++TY+ L+ G N L +L++ D M + I D++ Y ++
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ + + GK D+ +F + + P T+N M++GLC R A + + +++ G
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
+P+ TYN LI+ + G + +++E+ +A T + R K L+
Sbjct: 497 LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLD 556
Query: 193 ILS 195
+LS
Sbjct: 557 MLS 559
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ C+ D G+ + + G+ P+VVTYN++I+G LL + LL +M E G
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM----ICGDLTPCTATFNIMLNGLCKNRYT 117
PD +YN+L+ + G + + ++M GD + N++ +G +
Sbjct: 496 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFL 555
Query: 118 D 118
D
Sbjct: 556 D 556
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 179 bits (453), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 189/360 (52%), Gaps = 4/360 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ +C ++++M E G PD VT+ +LI G ++ S ++ L+D M++ G
Sbjct: 154 LLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG 213
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ +Y ++++ L + G D A + M + ++ +++ LCK R+ D+AL
Sbjct: 214 CQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 273
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ G P ++TY+ LI LC GR A +L ++ + PN +T++ ++
Sbjct: 274 NLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAF 333
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K ++ M ++ + F Y ++I F + RL EA +E M+ ++
Sbjct: 334 VKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNV 393
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTLIN +CK +++ L EM ++G + T+T LI G +A + A++ +
Sbjct: 394 VTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 453
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M +G N+ YN ++D L K+GK+ A+ VFE ++ D +TY+ M+ +CKA +
Sbjct: 454 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 154/292 (52%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ D +LN+M A I +VV Y+++I + +L+L EM G
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P+V +Y+SL+ CL G+ +A+R+ DMI + P TF+ +++ K A
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + K P + TY+ LI G C RL A+ +L+ + PN +TY T++
Sbjct: 344 KLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGF 403
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ G+E+ M ++G + Y T+I F + A +QMV+ GV +I
Sbjct: 404 CKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 463
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
++YN L++ CK GKL A ++ + +++ E D YT+ I+I+G+CKAG K
Sbjct: 464 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 195/394 (49%), Gaps = 4/394 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + FD + +M GIS ++ TYN LI R S LS +L LL +M+++G
Sbjct: 84 LLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLG 143
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ + NSL++ + +A + M+ P T TF +++GL + A+
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P+LVTY ++ GLCK G A +L ++ + N + Y+T++
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R L + + M+ KG + Y ++I+ GR +A+ + M+ + ++
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+++ LI+ + K+GKL A L +EM K+ + + +T++ LI+G C + A+ LE
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M + N+ YN +++ K ++D + +F M V ++ TY++++H +A+
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 443
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
+A + + GV ++DGL +G
Sbjct: 444 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 477
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 35/224 (15%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C + + +L+ M E I+P++VT+++LI + L + L +EM++
Sbjct: 294 LISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS 353
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P++++Y+SL++ L + EA ++ + MI D P T+N ++NG CK + D +
Sbjct: 354 IDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGM 413
Query: 122 RMFRGLQKHGFV-----------------------------------PELVTYNILIKGL 146
+FR + + G V P ++TYNIL+ GL
Sbjct: 414 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 473
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
CK G+L A + + L S P+ TY +++ + K+K+G
Sbjct: 474 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 138/290 (47%), Gaps = 4/290 (1%)
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
D+A+ +F + + P ++ ++ L+ + K + +++ G + N TY +
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ C R + L L +L M + GY D +++ F R+ +A ++QMV G
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+ D V++ TLI+ K A L+D M ++G + D T+ +++GLCK G+ A
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 353
L M ++N+ Y+ ++D L K D A+N+F ME K + TYSS++ LC
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
R AS+LL ++ + A++D G +A+K+ ++
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM 349
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 137/323 (42%), Gaps = 41/323 (12%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
D+A +F M P F+ +L+ + K D + ++ G L TYNIL
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 143 I-----------------------------------KGLCKAGRLRTARWILKELGDSGH 167
I G C R+ A ++ ++ + G+
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 168 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
P+ +T+TT++ F + K + ++ M ++G D Y V+ K G A +
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
+ +M ++ ++V Y+T+I+ CK + A L EME +G + T++ LI LC
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----- 342
G A L M + + NL ++ ++D K GK+ A ++E M +K S
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM-IKRSIDPNI 358
Query: 343 FTYSSMVHNLCKAKRLPSASKLL 365
FTYSS+++ C RL A ++L
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQML 381
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 117/252 (46%), Gaps = 4/252 (1%)
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ S P+ I ++ ++ + K+ L + M+ G + + + Y +I F + R
Sbjct: 69 MAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSR 128
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
L A + +M+ G + DIV+ N+L+N +C ++ A L+D+M + G++ D T T
Sbjct: 129 LSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTT 188
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 340
LI GL A ++ M + G +L Y +V+ L K G D A+N+ ME
Sbjct: 189 LIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAK 248
Query: 341 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 397
+ YS+++ +LCK + A L GVR +++ L + G +A
Sbjct: 249 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDAS 308
Query: 398 KIQSKIRMAKIS 409
++ S + KI+
Sbjct: 309 RLLSDMIERKIN 320
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 178 bits (451), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 196/407 (48%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + +D + +M+ GI ++ T N L+ R S LS +L L +M+++G
Sbjct: 87 LLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLG 146
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + ++ SL++ + + +A +F M+ P +N +++GLCK++ DNAL
Sbjct: 147 HEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNAL 206
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++K G P++VTYN LI GLC +GR A ++ + P+ T+ ++ C
Sbjct: 207 DLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDAC 266
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + E M R+ D Y +I RL EA + MV+ G D+
Sbjct: 267 VKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDV 326
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y+ LIN YCK K+E L EM ++G + T+TILI G C+AG + A
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G N+ YN ++ L +GKI+ A+ + M+ D TY+ ++ +CKA
Sbjct: 387 MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE 446
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A + S G+ ++ GL G RREA + K++
Sbjct: 447 VADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMK 493
Score = 139 bits (351), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 148/305 (48%), Gaps = 35/305 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG---------ATR--------- 43
+ID C+ D +LNRM + GI PDVVTYNSLI+G ATR
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Query: 44 --------NSLLSCSL---------DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 86
N+L+ + + +EM+ + PD+ +Y+ L++ L + DEA
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+F M+ P T++I++NG CK++ ++ +++F + + G V VTY ILI+G
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGY 371
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C+AG+L A I + + G PN ITY ++ N K + L IL+ M++ G D
Sbjct: 372 CRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADI 431
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y +I K G + +A D + G+ DI +Y T++ K+G A L +
Sbjct: 432 VTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRK 491
Query: 267 MEKQG 271
M++ G
Sbjct: 492 MKEDG 496
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 171/362 (47%), Gaps = 4/362 (1%)
Query: 34 YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
Y ++ R L SLDL M++ P + ++ L+ + ++ K D +++ M
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 94 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 153
+ T NI+LN C+ AL + K G P +VT+ L+ G C+ R+
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 154 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
A ++ ++ G+ PN + Y TI+ ++++ L++L+ M++ G D Y ++I
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ GR +AT + M + D+ ++N LI+ KEG++ A +EM ++ +
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
D T+++LI GLC + A +M G ++ Y+ +++ K K++H + +
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 334 FESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
F M V+++ TY+ ++ C+A +L A ++ + GV ++ GL
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408
Query: 390 SG 391
+G
Sbjct: 409 NG 410
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 95/178 (53%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C + D + M G PDVVTY+ LI G ++ + + L EM +
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + +Y L+ + GK + A +F+ M+ + P T+N++L+GLC N + A
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 178
L + +QK+G ++VTYNI+I+G+CKAG + A I L G P+ TYTT+M
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 88/170 (51%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ + G + M + G+ + VTY LI G R L+ + ++ M+
Sbjct: 331 ILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFC 390
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P++ +YN L+H L GK ++A + DM + T+NI++ G+CK +A
Sbjct: 391 GVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 170
++ L G +P++ TY ++ GL K G R A + +++ + G PN
Sbjct: 451 WDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 96/207 (46%), Gaps = 5/207 (2%)
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
R+ Y+ +G Y ++ ++ +L ++ D MV I ++ L++ K K +
Sbjct: 40 RRAYS-NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYD 98
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
L ++M+ G + T IL++ C+ + A L M K+G + ++ + ++
Sbjct: 99 VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLL 158
Query: 319 DRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
+ + ++ A+ +F+ M + Y++++ LCK+K++ +A LL K G+
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG 218
Query: 375 ILKSAQKAVVDGLRHSGCRREAKKIQS 401
+++ GL SG +A ++ S
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVS 245
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 178 bits (451), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 201/410 (49%), Gaps = 6/410 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+ + + D Y+ + M + GI PDVVTYNS+IA + + ++++L+ M++ G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +YNS++H G+P EA + M + P T++++++ LCKN A
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + K G PE+ TY L++G G L +L + +G P+ ++ ++
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + + S M+++G + Y VI K GR+++A Y EQM+ +G+
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ YN+LI+ C K E A L+ EM +G + +ID CK G + + E
Sbjct: 442 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFEL 501
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 357
M +IG N+ YN +++ GK+D A+ + M ++ TYS++++ CK R
Sbjct: 502 MVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR 561
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
+ A L SGV ++ GL + RR A + +R+ +
Sbjct: 562 MEDALVLFKEMESSGVSPDIITYNIILQGLFQT--RRTAAAKELYVRITE 609
Score = 169 bits (427), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 200/396 (50%), Gaps = 7/396 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE---MGIPPDVWSY 69
DA +L RM E G P+V +YN L+ G + +L+LL M + G PPDV SY
Sbjct: 140 DAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
++++ F+ G D+A + +M+ + P T+N ++ LCK + D A+ + + K
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVK 259
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
+G +P+ +TYN ++ G C +G+ + A LK++ G P+ +TY+ +M +N +
Sbjct: 260 NGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCME 319
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
+I +M ++G + Y T++ + G L E ++ MV +G+ D ++ LI
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
Y K+GK++ A L+ +M +QG + T+ +I LCK+G ++ A L+ E M G
Sbjct: 380 AYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
YN ++ L K + A + M + ++ ++S++ + CK R+ + KL
Sbjct: 440 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 499
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
++ GV+ +++G +G EA K+ S
Sbjct: 500 ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLS 535
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 203/437 (46%), Gaps = 39/437 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I A C+ + D +LN M + G+ PD +TYNS++ G + ++ L +M G
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML------------- 108
+ PDV +Y+ LM L + G+ EA ++F M L P T+ +L
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 356
Query: 109 --------NGLCKNRYT--------------DNALRMFRGLQKHGFVPELVTYNILIKGL 146
NG+ + Y D A+ +F +++ G P VTY +I L
Sbjct: 357 GLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL 416
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK+GR+ A +++ D G +P I Y +++ K++ E++ M +G +
Sbjct: 417 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 476
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ ++I + K GR+ E+ E MV GV+ ++++YNTLIN YC GK++ A LL
Sbjct: 477 IFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSG 536
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M G + + T++ LI+G CK ++ A + + M G ++ YN I+ L + +
Sbjct: 537 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 596
Query: 327 IDHA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
A + + ES + TY+ ++H LCK K A ++ + +++
Sbjct: 597 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 656
Query: 383 VVDGLRHSGCRREAKKI 399
++D L G EAK +
Sbjct: 657 MIDALLKVGRNDEAKDL 673
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 189/435 (43%), Gaps = 51/435 (11%)
Query: 14 AGYTILNRMREAG---ISPDVVTYNSLIAGATRNSLL----------------------- 47
A + NRM AG ++PD+ TY LI R L
Sbjct: 67 AAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFT 126
Query: 48 ------------SCSLDL-LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI- 93
S ++D+ L M E+G P+V+SYN L+ L + EA + M
Sbjct: 127 PLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMAD 186
Query: 94 --CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 151
G P ++ ++NG K +D A + + G +P++VTYN +I LCKA
Sbjct: 187 DRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQA 246
Query: 152 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 211
+ A +L + +G P+ +TY +I+ + + K + L M+ G D Y
Sbjct: 247 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSL 306
Query: 212 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 271
++ K GR EA + M G++ +I +Y TL+ Y +G L + LLD M + G
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366
Query: 272 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
D Y +ILI K G + A L M + G + N Y ++ L K G+++ A+
Sbjct: 367 IHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426
Query: 332 NVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
FE M + Y+S++H LC + A +L+L L G+ + +++D
Sbjct: 427 LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIID-- 484
Query: 388 RHSGCRREAKKIQSK 402
S C +E + I+S+
Sbjct: 485 --SHC-KEGRVIESE 496
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 182/397 (45%), Gaps = 43/397 (10%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI AY + D + ++MR+ G++P+ VTY ++I ++ + ++ ++M++
Sbjct: 376 ILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 435
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P YNSL+H L K + A + +M+ + T FN +++ CK +
Sbjct: 436 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES 495
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++F + + G P ++TYN LI G C AG++ A +L + G PN +TY+T++
Sbjct: 496 EKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLIN- 554
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
GYC KI R+++A ++M + GV D
Sbjct: 555 ---------------------------GYC-------KISRMEDALVLFKEMESSGVSPD 580
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I++YN ++ + + AA L + + G + + T+ I++ GLCK + L +
Sbjct: 581 IITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK-NKLTDDALQM- 638
Query: 301 YMNKIGFDSNLEA--YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 354
+ N D LEA +N ++D L K G+ D A ++F + V + +TY M N+
Sbjct: 639 FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 698
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
L +L LS +G + +V L G
Sbjct: 699 QGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 735
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 151/333 (45%), Gaps = 14/333 (4%)
Query: 53 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI---CGDLTPCTATFNIMLN 109
+ DE+L G ++ N + + + P A + M ++TP T+ I++
Sbjct: 37 VFDELLRRGRGASIYGLNRALADVAR-DSPAAAVSRYNRMARAGADEVTPDLCTYGILIG 95
Query: 110 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR-WILKELGDSGHA 168
C+ D + K GF + + + L+KGLC R A +L+ + + G
Sbjct: 96 CCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 155
Query: 169 PNAITYTTIMK-CCFRNRKYKLGLEILSAM---KRKGYTFDGFGYCTVIAAFVKIGRLKE 224
PN +Y ++K C NR + LE+L M + G D Y TVI F K G +
Sbjct: 156 PNVFSYNILLKGLCDENRSQE-ALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDK 214
Query: 225 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 284
A +M+ G+ D+V+YN++I CK ++ A +L+ M K G D T+ ++
Sbjct: 215 AYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 274
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 340
G C +G K A L+ M G + ++ Y+ ++D L K+G+ A +F+SM +
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334
Query: 341 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ TY +++ L LL +++G+
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 102/240 (42%), Gaps = 35/240 (14%)
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
P+ TY ++ CC R + LG L + +KG+ D + ++ R +A D
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 229 MEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ---GFECDKYTHTILID 284
+ + +T+ G ++ SYN L+ C E + + A LL M G D ++T +I+
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 285 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT 344
G K G+ D Y+ ++DR + D T
Sbjct: 205 GFFKEGD---------------SDKAYSTYHEMLDR----------------GILPDVVT 233
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
Y+S++ LCKA+ + A ++L + +K+GV +++ G SG +EA K+R
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR 293
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/239 (18%), Positives = 90/239 (37%), Gaps = 45/239 (18%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC+ + + M +G+SPD++TYN ++ G + + + +L + E G
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611
Query: 62 IPPDVWSYNSLMH-----------------------------------CLFQLGKPDEAN 86
++ +YN ++H L ++G+ DEA
Sbjct: 612 TQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAK 671
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+F L P T+ +M + + ++F ++ +G + N +++ L
Sbjct: 672 DLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVREL 731
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC----------FRNRKYKLGLEILS 195
+ G + A L + + + A T + + F KYK +E LS
Sbjct: 732 LQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKYQEYYRFLPEKYKSFIESLS 790
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 198/397 (49%), Gaps = 4/397 (1%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
FD + ++M GIS D+ ++ LI R S LS +L LL +M+++G P + + S
Sbjct: 95 FDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGS 154
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
L++ Q + EA + M P +N ++NGLCKNR +NAL +F ++K G
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
+ VTYN LI GL +GR A +L+++ PN I +T ++ +
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+ M R+ + F Y ++I F G L +A + MV+ G D+V+YNTLI +
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 311
CK ++E L EM QG D +T+ LI G C+AG + A+ M G ++
Sbjct: 335 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 394
Query: 312 EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLS 367
YN ++D L +GKI+ A+ + E ++ D TY+ ++ LC+ +L A L S
Sbjct: 395 VTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRS 454
Query: 368 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ GV+ A ++ GL G +REA K+ +++
Sbjct: 455 LTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 491
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 180/350 (51%), Gaps = 1/350 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ +CQ F ++++ M G P+VV YN++I G +N L+ +L++ M + G
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I D +YN+L+ L G+ +A R+ +DM+ + P F +++ K A
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + + VP + TYN LI G C G L A+++ + G P+ +TY T++
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++++ + G+++ M +G D F Y T+I + + G+L A +MV GV DI
Sbjct: 335 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 394
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN L++ C GK+E A +++++++K + D T+ I+I GLC+ +K A
Sbjct: 395 VTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRS 454
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHN 351
+ + G + AY ++ L + G A + M+ +D F S +++
Sbjct: 455 LTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK-EDGFMPSERIYD 503
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 4/195 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ + G + M G+ D TYN+LI G + L+ + + + M++ G
Sbjct: 330 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ +YN L+ CL GK ++A + +D+ ++ T+NI++ GLC+ A
Sbjct: 390 VSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAW 449
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR L + G P+ + Y +I GLC+ G R A + + + + G P+ Y +
Sbjct: 450 CLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL--- 506
Query: 182 FRNRKYKLGLEILSA 196
R+ L E++ A
Sbjct: 507 -RDHYTSLSAELIKA 520
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 81/172 (47%), Gaps = 4/172 (2%)
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
IV + ++ + K K + L +ME G D Y+ TILI C+ + A L
Sbjct: 79 IVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLG 138
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M K+GF ++ +++ + + A+++ +SM+ V + Y+++++ LCK +
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
L +A ++ K G+R ++ GL +SG +A ++ + KI
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKI 250
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 193/408 (47%), Gaps = 39/408 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ +C +IL +M + G PD VT SL+ G R + +S ++ L+D+M+E+
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN++ ++ LCK + ++A
Sbjct: 185 GYKPDIVAYNAI-----------------------------------IDSLCKTKRVNDA 209
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
F+ +++ G P +VTY L+ GLC + R A +L ++ PN ITY+ ++
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 269
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+N K E+ M R D Y ++I R+ EA + MV+ G D
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+VSYNTLIN +CK ++E L EM ++G + T+ LI G +AG++ A+
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M+ G ++ YN ++ L +G+++ A+ +FE M+ + D TY++++ +CK
Sbjct: 390 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++ A L S G++ ++ GL G E + + +K++
Sbjct: 450 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 160/333 (48%), Gaps = 4/333 (1%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K ++A +F DM+ P FN +L+ + K + D + + + ++ G +L T+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 200
I+I C ++ A IL ++ G+ P+ +T +++ R + + ++ M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 201 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 260
GY D Y +I + K R+ +A D+ +++ G++ ++V+Y L+N C + A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 261 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 320
LL +M K+ + T++ L+D K G + A+ E M ++ D ++ Y+ +++
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 321 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 376
L +ID A +F+ M K D +Y+++++ CKAKR+ KL + G+
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 377 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
++ G +G +A++ S++ IS
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 175 bits (443), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 182/355 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C+ D ++L +M + I DVV Y ++I ++ +L+L EM G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V +YNSL+ CL G+ +A+R+ DMI + P TF+ +++ K A
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+++ + K P++ TY+ LI G C RL A+ + + + PN +TY T++K
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ + G+E+ M ++G + Y T+I + G A ++MV+DGV DI
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++Y+ L++ CK GKLE A ++ + ++K E D YT+ I+I+G+CKAG ++
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAK 356
++ G N+ Y ++ + G + A +F M+ + S + L +A+
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRAR 580
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 200/435 (45%), Gaps = 39/435 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ +C+ +L +M + G PD+VT +SL+ G +S ++ L+D+M M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN------ 114
P+ ++N+L+H LF K EA + M+ P T+ ++NGLCK
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 115 -----------------------------RYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
+ ++AL +F + G P +VTYN LI+
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 205
LC GR A +L ++ + PN +T++ ++ + K ++ M ++ D
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 206 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 265
F Y ++I F RL EA E M++ ++V+YNTLI +CK ++E L
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 266 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
EM ++G + T+ LI GL +AG+ A+ + M G ++ Y+ ++D L K G
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Query: 326 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
K++ A+ VFE ++ D +TY+ M+ +CKA ++ L S GV+
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539
Query: 382 AVVDGLRHSGCRREA 396
++ G G + EA
Sbjct: 540 TMISGFCRKGLKEEA 554
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 177/370 (47%), Gaps = 5/370 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+IDA C + + + + M GI P+VVTYNSLI S + LL +M+E
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P+V ++++L+ + GK EA +++ +MI + P T++ ++NG C + D A
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
MF + P +VTYN LIKG CKA R+ + +E+ G N +TY T+++
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+ + +I M G D Y ++ K G+L++A E + ++ DI
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN +I CK GK+E + L + +G + + +T +I G C+ G + A
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M + G N YN ++ +DG + + + M V D+ T SMV N+ R
Sbjct: 561 MKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI-SMVINMLHDGR 619
Query: 358 LPSASKLLLS 367
L + +LS
Sbjct: 620 LEKSYLEMLS 629
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 186/390 (47%), Gaps = 4/390 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + FD ++ RM+ IS D+ +YN LI R S L +L +L +M+++G
Sbjct: 86 LLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLG 145
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ + +SL++ + EA + M + P T TFN +++GL + A+
Sbjct: 146 YEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV 205
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + G P+L TY ++ GLCK G + A +LK++ + + YTTI+
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ L + + M KG + Y ++I GR +A+ + M+ + ++
Sbjct: 266 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+++ LI+ + KEGKL A L DEM K+ + D +T++ LI+G C + A+ E
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M N+ YN ++ K +++ + +F M V ++ TY++++ L +A
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
A K+ + GV ++DGL
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Score = 135 bits (339), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 178/398 (44%), Gaps = 4/398 (1%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
+ D + M ++ P +V +N L++ + + + L + M + I D++SY
Sbjct: 59 LKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSY 118
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
N L++C + + A V M+ P T + +LNG C + A+ + +
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
+ P VT+N LI GL + A ++ + G P+ TY T++ + L
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
L +L M++ D Y T+I A + +A + +M G++ ++V+YN+LI
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 309
C G+ A LL +M ++ + T + LID K G + A + M K D
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 310 NLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLL 365
++ Y+ +++ ++D A ++FE M KD F TY++++ CKAKR+ +L
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 366 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ G+ ++ GL +G A+KI K+
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 119/263 (45%), Gaps = 4/263 (1%)
Query: 151 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
+L A + E+ S P+ + + ++ + K+ L + + M+ ++D + Y
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
+I F + +L A + +M+ G + DIV+ ++L+N YC ++ A L+D+M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
++ + T LI GL A ++ M G +L Y +V+ L K G ID A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 331 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 386
+++ + ME D Y++++ LC K + A L G+R +++
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 387 LRHSGCRREAKKIQSKIRMAKIS 409
L + G +A ++ S + KI+
Sbjct: 300 LCNYGRWSDASRLLSDMIERKIN 322
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C++ + + ++++ + PD+ TYN +I G + + DL +
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V Y +++ + G +EA+ +F++M P + T+N ++ ++ +
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 589
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 155
+ + ++ GFV + T +++I L GRL +
Sbjct: 590 AELIKEMRSCGFVGDASTISMVINML-HDGRLEKS 623
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ C+ + G+ + + G+ P+V+ Y ++I+G R L + L EM E
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM----ICGDLTPCTATFNIMLNGLCKNRY 116
G P+ +YN+L+ + G + + ++M GD + + N++ +G + Y
Sbjct: 565 GTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSY 624
Query: 117 TD 118
+
Sbjct: 625 LE 626
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 202/408 (49%), Gaps = 6/408 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ +C +++RM E PD+VT ++LI G +S +L L+D M+E G
Sbjct: 146 LVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG 205
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD +Y +++ L + G A +F+ M ++ ++I+++ LCK+ D+AL
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 265
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ G ++VTY+ LI GLC G+ +L+E+ P+ +T++ ++
Sbjct: 266 SLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 325
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K E+ + M +G D Y ++I F K L EA + MV+ G + DI
Sbjct: 326 VKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDI 385
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y+ LIN YCK +++ L E+ +G + T+ L+ G C++G + A+ +
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 445
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKAK 356
M G ++ Y ++D L +G+++ A+ +FE M+ K T Y+ ++H +C A
Sbjct: 446 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ-KSRMTLGIGIYNIIIHGMCNAS 504
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++ A L S GV+ ++ GL G EA + K++
Sbjct: 505 KVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Score = 166 bits (419), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 184/372 (49%), Gaps = 7/372 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID+ C+ SFD ++ N M GI DVVTY+SLI G + +L EM+
Sbjct: 250 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 309
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PDV ++++L+ + GK EA ++ +MI + P T T+N +++G CK A
Sbjct: 310 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEA 369
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+MF + G P++VTY+ILI CKA R+ + +E+ G PN ITY T++
Sbjct: 370 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 429
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ K E+ M +G Y ++ G L +A + E+M + L
Sbjct: 430 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 489
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I YN +I+ C K++ A+ L + +G + D T+ ++I GLCK G++ A +
Sbjct: 490 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFR 549
Query: 301 YMNKIGFDSNLEAYNCIV-DRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKA 355
M + G + YN ++ LG G I ++ + E M+V DS T MV ++
Sbjct: 550 KMKEDGCTPDDFTYNILIRAHLGGSGLI-SSVELIEEMKVCGFSADSSTI-KMVIDMLSD 607
Query: 356 KRLPSASKLLLS 367
+RL + +LS
Sbjct: 608 RRLDKSFLDMLS 619
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 195/413 (47%), Gaps = 39/413 (9%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ YC+ +++L R + G PD +T+++L+ G +S ++ L+D M+EM
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PD+ + ++L++ L G+ EA + M+ P T+ +LN LCK+ + A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +FR +++ +V Y+I+I LCK G A
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA------------------------- 264
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
L + + M+ KG D Y ++I G+ + + +M+ + D
Sbjct: 265 ----------LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+V+++ LI+++ KEGKL A L +EM +G D T+ LIDG CK + A +
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G + ++ Y+ +++ K ++D + +F + K ++ TY+++V C++
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 434
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+L +A +L + GV ++DGL +G +A +I K++ ++++
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 173/374 (46%), Gaps = 4/374 (1%)
Query: 18 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 77
+ +M E I VV Y+ +I ++ +L L +EM GI DV +Y+SL+ L
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 78 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 137
GK D+ ++ ++MI ++ P TF+ +++ K A ++ + G P+ +
Sbjct: 292 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 351
Query: 138 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 197
TYN LI G CK L A + + G P+ +TY+ ++ + ++ G+ + +
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 411
Query: 198 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 257
KG + Y T++ F + G+L A + ++MV+ GV +V+Y L++ C G+L
Sbjct: 412 SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL 471
Query: 258 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 317
A + ++M+K + I+I G+C A + A ++ G ++ YN +
Sbjct: 472 NKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVM 531
Query: 318 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ L K G + A +F M+ D FTY+ ++ L S+ +L+ G
Sbjct: 532 IGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGF 591
Query: 374 RILKSAQKAVVDGL 387
S K V+D L
Sbjct: 592 SADSSTIKMVIDML 605
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 146/299 (48%), Gaps = 5/299 (1%)
Query: 109 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 168
NG+ + D A+ +F + + +P + +N L + + + K + +G
Sbjct: 44 NGIVDIKVND-AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIE 102
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
+ T T ++ C R +K +L + GY D + T++ F GR+ EA
Sbjct: 103 HDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVAL 162
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+++MV + D+V+ +TLIN C +G++ A +L+D M + GF+ D+ T+ +++ LCK
Sbjct: 163 VDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCK 222
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 344
+GN A M + +++ Y+ ++D L KDG D A+++F ME+K D T
Sbjct: 223 SGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 282
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
YSS++ LC + +K+L + + A++D G EAK++ +++
Sbjct: 283 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 198/407 (48%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C +++RM E G PD++T N+L+ G + + ++ L+D+M+E G
Sbjct: 164 LINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG 223
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y +++ + + G+ A + + M ++ ++I+++GLCK+ DNA
Sbjct: 224 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 283
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ G ++TYNILI G C AGR +L+++ PN +T++ ++
Sbjct: 284 NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + E+ M +G D Y ++I F K L +A ++ MV+ G +I
Sbjct: 344 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 403
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++N LIN YCK +++ L +M +G D T+ LI G C+ G + A+ +
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 463
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M N+ Y ++D L +G+ + A+ +FE +E D Y+ ++H +C A +
Sbjct: 464 MVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 523
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A L S GV+ ++ GL G EA+ + K+
Sbjct: 524 VDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
Score = 162 bits (409), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 162/327 (49%), Gaps = 1/327 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C +D G +L M + I+P+VVT++ LI + L + +L EM+
Sbjct: 303 ILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR 362
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PD +Y SL+ + D+AN++ M+ P TFNI++NG CK D+
Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 422
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +FR + G V + VTYN LI+G C+ G+L A+ + +E+ PN +TY ++
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
N + + LEI +++ D Y +I ++ +A D + GV+
Sbjct: 483 LCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPG 542
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +YN +I CK+G L A LL +ME+ G D +T+ ILI G+ + +E
Sbjct: 543 VKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIE 602
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKI 327
+ + GF + ++D L DG++
Sbjct: 603 ELKRCGFSVDASTIKMVIDMLS-DGRL 628
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 187/420 (44%), Gaps = 39/420 (9%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P V+ ++ L + + L L +M GI ++++ + +++C + K A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
+I P T TF+ ++NGLC AL + + + G P+L+T N L+ GLC
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
+G+ A ++ ++ + G PNA+TY ++ ++ + L +E+L M+ + D
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC---------------- 252
Y +I K G L A + +M G+ +I++YN LI +C
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 253 -------------------KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
KEGKL A L EM +G D T+T LIDG CK ++
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
A ++ M G D N+ +N +++ K +ID + +F M V D+ TY++++
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
C+ +L A +L + V K ++DGL +G +A +I KI +K+
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 162/338 (47%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ S D + + N M GI+ +++TYN LI G LL +M++
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P+V +++ L+ + GK EA + ++MI + P T T+ +++G CK + D A
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+M + G P + T+NILI G CKA R+ + +++ G + +TY T+++
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
K + E+ M + + Y ++ G ++A + E++ ++LD
Sbjct: 448 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I YN +I+ C K++ A+ L + +G + T+ I+I GLCK G + A L
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 567
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
M + G + YN ++ DG ++ + E ++
Sbjct: 568 KMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 605
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 147/312 (47%), Gaps = 6/312 (1%)
Query: 81 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 140
K D+A +F+DMI P F+ + + + K + D L + + ++ G L T +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 141 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKR 199
I+I C+ +L A + ++ G+ PN IT++T++ C R + LE++ M
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSE-ALELVDRMVE 186
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
G+ D T++ G+ EA +++MV G Q + V+Y ++N+ CK G+
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A LL +ME++ + D ++I+IDGLCK G++ A M G +N+ YN ++
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 320 RLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
G+ D + M + + T+S ++ + K +L A +L + G+
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 376 LKSAQKAVVDGL 387
+++DG
Sbjct: 367 DTITYTSLIDGF 378
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 35/230 (15%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ D G + +M G+ D VTYN+LI G L+ + +L EM+
Sbjct: 408 ILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR 467
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQ------------------------------ 90
+PP++ +Y L+ L G+ ++A +F+
Sbjct: 468 KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 527
Query: 91 -DMICG----DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 145
D+ C + P T+NIM+ GLCK A +FR +++ G P+ TYNILI+
Sbjct: 528 WDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 587
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 195
G + +++EL G + +A T ++ R K L++LS
Sbjct: 588 HLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDMLS 637
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 172 bits (436), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 194/395 (49%), Gaps = 4/395 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI C+ + + + ++M E G P TY LI L+ + +L DEM+
Sbjct: 271 ILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPR 330
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V +Y L+ L + GK +EAN V + M+ + P T+N ++NG CK+ A
Sbjct: 331 GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPA 390
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++K P + T+N L++GLC+ G+ A +LK + D+G +P+ ++Y ++
Sbjct: 391 FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R ++LS+M D + +I AF K G+ A+ ++ M+ G+ LD
Sbjct: 451 LCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD 510
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V+ TLI+ CK GK A +L+ + K ++ +++D L K +K L
Sbjct: 511 EVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLG 570
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
+NK+G ++ Y +VD L + G I + + E M++ + + Y+ +++ LC+
Sbjct: 571 KINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFG 630
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
R+ A KLL + SGV +V G ++G
Sbjct: 631 RVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG 665
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 196/414 (47%), Gaps = 7/414 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L+ +C+ ++ + + M +E +P+ V+Y+ LI G L + L D+M E
Sbjct: 236 LLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK 295
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P +Y L+ L G D+A +F +MI P T+ ++++GLC++ + A
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK- 179
+ R + K P ++TYN LI G CK GR+ A +L + PN T+ +M+
Sbjct: 356 NGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
C + YK + +L M G + D Y +I + G + A + M ++
Sbjct: 416 LCRVGKPYK-AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEP 474
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D +++ +IN +CK+GK + A L M ++G D+ T T LIDG+CK G + A L
Sbjct: 475 DCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFIL 534
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 355
E + K+ + + N I+D L K K+ + + + V TY+++V L ++
Sbjct: 535 ETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRS 594
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+ + ++L SG +++GL G EA+K+ S ++ + +S
Sbjct: 595 GDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 178/401 (44%), Gaps = 44/401 (10%)
Query: 54 LDEMLEM-GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 112
DE+ E+ G + Y+SL+ L +L A ++ M + ++N LC
Sbjct: 147 FDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALC 206
Query: 113 KNRYTDNALRMFRGLQKHGFV------------------------------------PEL 136
KN YT+ A + K GFV P
Sbjct: 207 KNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNS 266
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
V+Y+ILI GLC+ GRL A + ++G+ G P+ TYT ++K +
Sbjct: 267 VSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDE 326
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
M +G + Y +I + G+++EA +MV D + +++YN LIN YCK+G+
Sbjct: 327 MIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGR 386
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+ A+ LL MEK+ + + T L++GLC+ G A L+ M G ++ +YN
Sbjct: 387 VVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNV 446
Query: 317 IVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 372
++D L ++G ++ A + SM D T++++++ CK + AS L L+ G
Sbjct: 447 LIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG 506
Query: 373 VRILKSAQKAVVDGLRHSGCRREAKKIQS---KIRMAKISH 410
+ + + ++DG+ G R+A I K+R+ H
Sbjct: 507 ISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPH 547
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 190/421 (45%), Gaps = 25/421 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ C+ +L RM + G+SPD+V+YN LI G R ++ + LL M
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFD 471
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD ++ ++++ + GK D A+ M+ ++ T +++G+CK T +AL
Sbjct: 472 IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL 531
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L K + + N+++ L K +++ +L ++ G P+ +TYTT++
Sbjct: 532 FILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGL 591
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ IL MK G + + Y +I + GR++EA + M GV +
Sbjct: 592 IRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC------------KA 289
V+Y ++ Y GKL+ A + M ++G+E + ++ L+ G
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTV 711
Query: 290 GNIKGARLHLEYMNKI--------GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 341
+I E +N++ G S L + +V RL K+G+ D + ++ +++ +
Sbjct: 712 SDIALRETDPECINELISVVEQLGGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERG 769
Query: 342 SFTYSSM---VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
F +M + + C K+ +L+ LKSG + V+ GL+ G A++
Sbjct: 770 VFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARE 829
Query: 399 I 399
+
Sbjct: 830 L 830
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 127/299 (42%), Gaps = 23/299 (7%)
Query: 118 DNALRMFRGLQKHG-FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
D +R F + KH + + N L+K + +G R A ++
Sbjct: 84 DICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLYRVAHAVI---------------VA 128
Query: 177 IMKCCFRNRKYKLGLEILSAMKRK--GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
++K C R K L L R+ G+ + Y +++ + K+ A +M
Sbjct: 129 LIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEA 188
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
DG + ++ Y T++N CK G EAA + + ++ K GF D + T L+ G C+ N++
Sbjct: 189 DGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRD 248
Query: 295 ARLHLEYMNK-IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 349
A + M+K + N +Y+ ++ L + G+++ A + + M K + TY+ ++
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
LC + A L + G + ++DGL G EA + K+ +I
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 94/233 (40%), Gaps = 54/233 (23%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I+ CQF + +L+ M+++G+SP+ VTY ++ G N L +L+ + M+E
Sbjct: 621 IIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVER 680
Query: 61 GIPPDVWSYNSLMH---------------------------------------------- 74
G + Y+SL+
Sbjct: 681 GYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISG 740
Query: 75 -CLFQL------GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
C+F + G+ DE+N + Q+++ + A +I++ C + + + +
Sbjct: 741 LCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKA-MDIIMESYCSKKKHTKCMELITLV 799
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
K GFVP ++ ++I+GL K G AR ++ EL S T ++C
Sbjct: 800 LKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVEC 852
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 171 bits (433), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 198/394 (50%), Gaps = 5/394 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ YC+ + + ++++ EAG+ PD TY SLI G + L + + +EM G
Sbjct: 224 MVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG 283
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ +Y L+H L + DEA +F M + P T+ +++ LC + AL
Sbjct: 284 CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEAL 343
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +++ G P + TY +LI LC + AR +L ++ + G PN ITY ++
Sbjct: 344 NLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGY 403
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + ++++ M+ + + + Y +I + K + +A + +M+ V D+
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDV 462
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YN+LI+ C+ G ++AY LL M +G D++T+T +ID LCK+ ++ A +
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
+ + G + N+ Y ++D K GK+D A + E M K +S T+++++H LC +
Sbjct: 523 LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGK 582
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 391
L A+ L +K G++ S ++ L G
Sbjct: 583 LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
Score = 155 bits (392), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 180/353 (50%), Gaps = 5/353 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI + C ++ M E GI P++ TY LI + +LL +MLE
Sbjct: 328 VLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK 387
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+V +YN+L++ + G ++A V + M L+P T T+N ++ G CK+ A
Sbjct: 388 GLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKA 446
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + + + +P++VTYN LI G C++G +A +L + D G P+ TYT+++
Sbjct: 447 MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDS 506
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++++ + ++ ++++KG + Y +I + K G++ EA +E+M++ +
Sbjct: 507 LCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 566
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+++N LI+ C +GKL+ A LL ++M K G + T TILI L K G+ A +
Sbjct: 567 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 626
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
M G + Y + ++G++ A ++ M D FTYSS++
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 183/374 (48%), Gaps = 5/374 (1%)
Query: 34 YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 93
YN+L+ R L+ + EMLE + P++++YN +++ +LG +EAN+ ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 94 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 153
L P T+ ++ G C+ + D+A ++F + G V Y LI GLC A R+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 154 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 213
A + ++ D P TYT ++K + + L ++ M+ G + Y +I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 214 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 273
+ + ++A + + QM+ G+ ++++YN LIN YCK G +E A +++ ME +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 274 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 333
+ T+ LI G CK+ N+ A L M + ++ YN ++D + G D A +
Sbjct: 426 PNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 334 FESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
M V D +TY+SM+ +LCK+KR+ A L S + GV A++DG
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 390 SGCRREAKKIQSKI 403
+G EA + K+
Sbjct: 545 AGKVDEAHLMLEKM 558
Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 179/387 (46%), Gaps = 24/387 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI YC+ + +LN+M E + PDVVTYNSLI G R+ + LL M + G
Sbjct: 434 LIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD W+Y S++ L + + +EA +F + + P + +++G CK D A
Sbjct: 493 LVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAH 552
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
M + +P +T+N LI GLC G+L+ A + +++ G P T T ++
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRL 612
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + M G D Y T I + + GRL +A D M +M +GV D+
Sbjct: 613 LKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDL 672
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC--KAGNIKGARLHL 299
+Y++LI Y G+ A+ +L M G E ++T LI L K G KG+ L
Sbjct: 673 FTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPEL 732
Query: 300 EYM-NKIGFDS---------------NLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF 343
M N + FD+ N ++Y ++ + + G + A VF+ M+ +
Sbjct: 733 CAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGI 792
Query: 344 TYSSMVHNL-----CKAKRLPSASKLL 365
+ S +V N CK K+ A+K++
Sbjct: 793 SPSELVFNALLSCCCKLKKHNEAAKVV 819
Score = 118 bits (296), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 170/370 (45%), Gaps = 20/370 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ D + +L +M P+ +T+N+LI G + L + L ++M+++G
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P V + L+H L + G D A FQ M+ P T+ + C+ +A
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-- 179
M ++++G P+L TY+ LIKG G+ A +LK + D+G P+ T+ +++K
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Query: 180 ---------------CCFRNR-KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
C N ++ +E+L M T + Y +I ++G L+
Sbjct: 718 LEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLR 777
Query: 224 EATDYMEQMV-TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
A + M +G+ + +N L++ CK K A ++D+M G + +L
Sbjct: 778 VAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVL 837
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS 342
I GL K G + + + + G+ + A+ I+D +GK G ++ +F ME K+
Sbjct: 838 ICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVME-KNG 896
Query: 343 FTYSSMVHNL 352
+SS ++L
Sbjct: 897 CKFSSQTYSL 906
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 19/293 (6%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
FD Y+ +M +G PD TY + I R L + D++ +M E G+ PD+++Y+S
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSS 677
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT-------------- 117
L+ LG+ + A V + M P TF ++ L + +Y
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSN 737
Query: 118 ----DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG-DSGHAPNAI 172
D + + + +H P +Y LI G+C+ G LR A + + + G +P+ +
Sbjct: 738 MMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSEL 797
Query: 173 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 232
+ ++ CC + +K+ +++ M G+ +I K G + T + +
Sbjct: 798 VFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNL 857
Query: 233 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ G D +++ +I+ K+G +EA Y L + MEK G + T+++LI+G
Sbjct: 858 LQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 115/275 (41%), Gaps = 39/275 (14%)
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
YN L+ L + G + + + E+ + PN TY ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVN------------------- 226
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
GYC K+G ++EA Y+ ++V G+ D +Y +LI YC+ L+
Sbjct: 227 ---------GYC-------KLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLD 270
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
+A+ + +EM +G ++ +T LI GLC A I A M + Y ++
Sbjct: 271 SAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLI 330
Query: 319 DRLGKDGKIDHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
L + A+N+ + ME +K + TY+ ++ +LC + A +LL L+ G+
Sbjct: 331 KSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLM 390
Query: 375 ILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
A+++G G +A + + K+S
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
Query: 5 AYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE-MGIP 63
A + FD +L +M E ++P+ +Y LI G L + + D M GI
Sbjct: 734 AMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGIS 793
Query: 64 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 123
P +N+L+ C +L K +EA +V DMIC P + +++ GL K + +
Sbjct: 794 PSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSV 853
Query: 124 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
F+ L + G+ + + + I+I G+ K G + + + +G ++ TY+ +++
Sbjct: 854 FQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 188/400 (47%), Gaps = 4/400 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+ I+ +C+ +L +M + G PD+VT +SL+ G + +S ++ L+D+M+EM
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD +++ +L+H LF K EA + M+ P T+ ++NGLCK D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L + ++ +V +N +I LCK + A + E+ G PN +TY +++ C
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
++ +LS M K + + +I AF K G+L EA E+M+ + D
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++YN LIN +C +L+ A + M + + T+ LI+G CK ++
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M++ G N Y I+ + G D A VF+ M D TYS ++H LC
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+L +A + KS + + +++G+ +G EA
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA 522
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 184/364 (50%), Gaps = 4/364 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + F+ ++ +M+ GIS D+ TY+ I R S LS +L +L +M+++G
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ + +SL++ + +A + M+ P T TF +++GL + A+
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + G P+LVTY ++ GLCK G + A +L ++ + N + + TI+
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL 268
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ R ++ +++ + M+ KG + Y ++I GR +A+ + M+ + ++
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++N LI+ + KEGKL A L +EM ++ + D T+ +LI+G C + A+ ++
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M N++ YN +++ K +++ + +F M V ++ TY++++ +A
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 358 LPSA 361
SA
Sbjct: 449 CDSA 452
Score = 135 bits (339), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 165/329 (50%), Gaps = 4/329 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C + + +L+ M E I+P+VVT+N+LI + L + L +EM++
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD +YN L++ + DEA ++F+ M+ D P T+N ++NG CK + ++ +
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGV 418
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + + G V VTY +I+G +AG +A+ + K++ + + +TY+ ++
Sbjct: 419 ELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL 478
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
K L I +++ + F Y T+I K G++ EA D + ++ D+
Sbjct: 479 CSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDV 535
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNT+I+ C + L+ A L +M++ G + T+ LI + + + ++
Sbjct: 536 VTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKE 595
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
M GF + + + + L DG++D +
Sbjct: 596 MRSSGFVGDASTISLVTNML-HDGRLDKS 623
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 178/387 (45%), Gaps = 6/387 (1%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
+ D + M ++ P +V +N L++ + + + L ++M +GI D+++Y
Sbjct: 62 IKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTY 121
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 129
+ ++C + + A V M+ P T + +LNG C ++ +A+ + + +
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 130 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 189
G+ P+ T+ LI GL + A ++ ++ G P+ +TY T++ + L
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 190 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 249
L +L+ M+ + + T+I + K ++ A D +M T G++ ++V+YN+LIN
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 250 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHLEYMNKIGFD 308
C G+ A LL M ++ + T LID K G ++ +LH E + + D
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR-SID 360
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKL 364
+ YN +++ ++D A +F+ M KD TY+++++ CK KR+ +L
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 365 LLSCLKSGVRILKSAQKAVVDGLRHSG 391
+ G+ ++ G +G
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGFFQAG 447
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 147/302 (48%), Gaps = 4/302 (1%)
Query: 106 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 165
I+ N L D+A+ +F + K P +V +N L+ + K + + +++
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
G + + TY+ + C R + L L +L+ M + GY D +++ + R+ +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
++QMV G + D ++ TLI+ K A L+D+M ++G + D T+ +++G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 341
LCK G+I A L M +N+ +N I+D L K ++ A+++F ME K +
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 401
TY+S+++ LC R AS+LL + L+ + A++D G EA+K+
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352
Query: 402 KI 403
++
Sbjct: 353 EM 354
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 119/245 (48%), Gaps = 4/245 (1%)
Query: 169 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 228
P+ + + ++ + K++L + + M+ G + D + Y I F + +L A
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 229 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
+ +M+ G + DIV+ ++L+N YC ++ A L+D+M + G++ D +T T LI GL
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 344
A ++ M + G +L Y +V+ L K G ID A+N+ ME +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 345 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+++++ +LCK + + A L G+R ++++ L + G +A ++ S +
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 405 MAKIS 409
KI+
Sbjct: 321 EKKIN 325
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 4/194 (2%)
Query: 219 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
I ++ +A D MV IV +N L++ K K E L ++M+ G D YT
Sbjct: 61 IIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
++I I+ C+ + A L M K+G++ ++ + +++ +I A+ + + M
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 339 V----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
D+FT+++++H L + A L+ ++ G + VV+GL G
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 395 EAKKIQSKIRMAKI 408
A + +K+ A+I
Sbjct: 241 LALNLLNKMEAARI 254
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 77/195 (39%), Gaps = 38/195 (19%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C + D I ++++ + ++ YN++I G + + + DL +
Sbjct: 473 ILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLF---CSL 529
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I PDV +YN++ ++GLC R A
Sbjct: 530 SIKPDVVTYNTM-----------------------------------ISGLCSKRLLQEA 554
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+FR +++ G +P TYN LI+ + + ++KE+ SG +A T + +
Sbjct: 555 DDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNM 614
Query: 181 CFRNRKYKLGLEILS 195
R K L +LS
Sbjct: 615 LHDGRLDKSFLNMLS 629
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 168/333 (50%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++ C D Y I+ M +G P+VV Y +LI +NS ++ +L EM E G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD++ YNSL+ L + + DEA +M+ L P T+ ++G + +A
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + +++ G +P V LI CK G++ A + + D G +A TYT +M
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F+N K EI M+ KG D F Y +I F K+G +++A+ ++MV +G+ ++
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+ YN L+ +C+ G++E A LLDEM +G + T+ +IDG CK+G++ A +
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
M G + Y +VD + ++ AI +F
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 188/403 (46%), Gaps = 4/403 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ + ++L M G+S D TY+ LI G + + L+ EM+
Sbjct: 282 VLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSH 341
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI + Y+ + + + G ++A +F MI L P + ++ G C+ +
Sbjct: 342 GINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQG 401
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ ++K V TY ++KG+C +G L A I+KE+ SG PN + YTT++K
Sbjct: 402 YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKT 461
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+N ++ + +L MK +G D F Y ++I K R+ EA ++ +MV +G++ +
Sbjct: 462 FLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN 521
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y I+ Y + + +A + EM + G +K T LI+ CK G + A
Sbjct: 522 AFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYR 581
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G + + Y +++ L K+ K+D A +F M K D F+Y +++ K
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
+ AS + ++ G+ ++ G SG +AK++
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 171/364 (46%), Gaps = 4/364 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC+ + GY +L M++ I TY +++ G + L + +++ EM+ G
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V Y +L+ Q + +A RV ++M + P +N ++ GL K + D A
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ ++G P TY I G +A +A +KE+ + G PN + T ++
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K +M +G D Y ++ K ++ +A + +M G+ D+
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
SY LIN + K G ++ A + DEM ++G + + +L+ G C++G I+ A+ L+
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M+ G N Y I+D K G + A +F+ M++K DSF Y+++V C+
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 358 LPSA 361
+ A
Sbjct: 748 VERA 751
Score = 144 bits (364), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 186/419 (44%), Gaps = 50/419 (11%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + Q F +L M+E GI+PD+ YNSLI G ++ + + L EM+E G
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-ICGDLT--------------------PC 100
+ P+ ++Y + + + + A++ ++M CG L C
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577
Query: 101 TA--------------TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+A T+ +++NGL KN D+A +FR ++ G P++ +Y +LI G
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
K G ++ A I E+ + G PN I Y ++ R+ + + E+L M KG +
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
YCT+I + K G L EA ++M G+ D Y TL++ C+ +E A +
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG- 756
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI---GFD----SNLEAYNCIVD 319
K+G LI+ + K G L E +N++ FD N YN ++D
Sbjct: 757 TNKKGCASSTAPFNALINWVFKFGK---TELKTEVLNRLMDGSFDRFGKPNDVTYNIMID 813
Query: 320 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
L K+G ++ A +F M+ + TY+S+++ K R + + +G+
Sbjct: 814 YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 184/442 (41%), Gaps = 44/442 (9%)
Query: 7 CQFVSFDAGYTILNRMRE-------------------AGISPDVVTYNSLIAGATRNSLL 47
C F SF+ +++ RM E G S D V + L G +
Sbjct: 108 CNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYI 167
Query: 48 SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 107
++ + + + + P + L+ L + + D V++ M+ ++ T++++
Sbjct: 168 EEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHML 227
Query: 108 LNGLCK---------------------NRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ C+ D AL++ + G VP TY++LI GL
Sbjct: 228 IIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGL 287
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
CK RL A+ +L E+ G + + TY+ ++ + R ++ M G
Sbjct: 288 CKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKP 347
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
+ Y I K G +++A + M+ G+ +Y +LI YC+E + Y LL E
Sbjct: 348 YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVE 407
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M+K+ YT+ ++ G+C +G++ GA ++ M G N+ Y ++ ++ +
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467
Query: 327 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 382
A+ V + M+ D F Y+S++ L KAKR+ A L+ +++G++ A
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527
Query: 383 VVDGLRHSGCRREAKKIQSKIR 404
+ G + A K ++R
Sbjct: 528 FISGYIEASEFASADKYVKEMR 549
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 147/316 (46%), Gaps = 10/316 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ + + + +I + M E G++P+V+ YN L+ G R+ + + +LLDEM
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ +Y +++ + G EA R+F +M L P + + +++G C+ + A
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH----APNAITYTT 176
+ +F G K G +N LI + K G+ +L L D PN +TY
Sbjct: 752 ITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ + + E+ M+ Y +++ + K+GR E ++ + G
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ-----GFECDKYTHTILIDGLCKAGN 291
++ D + Y+ +IN + KEG A +L+D+M + G + T L+ G K G
Sbjct: 871 IEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGE 930
Query: 292 IKGARLHLEYMNKIGF 307
++ A +E M ++ +
Sbjct: 931 MEVAEKVMENMVRLQY 946
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 121/295 (41%), Gaps = 43/295 (14%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
ML+ +C+ + +L+ M G+ P+ VTY ++I G ++ L+ + L DEM
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726
Query: 61 GIPPDVWSY----------------------------------NSLMHCLFQLGKPDEAN 86
G+ PD + Y N+L++ +F+ GK +
Sbjct: 727 GLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKT 786
Query: 87 RVFQDMICGDL----TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
V ++ G P T+NIM++ LCK + A +F +Q +P ++TY L
Sbjct: 787 EVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
+ G K GR + E +G P+ I Y+ I+ + L ++ M K
Sbjct: 847 LNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA 906
Query: 203 TFDG----FGYC-TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
DG C +++ F K+G ++ A ME MV D + LIN C
Sbjct: 907 VDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein At1g03560,
mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2
SV=1
Length = 660
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 166/317 (52%), Gaps = 10/317 (3%)
Query: 56 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
E+ + P V + N+L+ +LG +E V++ M + P T+N ++NGL
Sbjct: 177 EIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAM 236
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
+ D+A R+F ++ P++VTYN +IKG CKAG+ + A L+++ GH + ITY
Sbjct: 237 FVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYM 296
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
T+++ C+ + + + + M KG + VI K G+L E E M+
Sbjct: 297 TMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRK 356
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G + ++ Y LI+ Y K G +E A LL M +GF+ D T++++++GLCK G ++ A
Sbjct: 357 GSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA 416
Query: 296 RLHLEYMNKIGFDS---NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 348
L+Y + FD N Y+ ++D LGK G++D A +FE M K DS+ Y+++
Sbjct: 417 ---LDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNAL 473
Query: 349 VHNLCKAKRLPSASKLL 365
+ K +++ A L
Sbjct: 474 IDAFTKHRKVDEAIALF 490
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 168/384 (43%), Gaps = 6/384 (1%)
Query: 13 DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 72
D+ + M I PD+VTYN++I G + +++ L +M G D +Y ++
Sbjct: 239 DSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTM 298
Query: 73 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 132
+ + ++Q+M + F++++ GLCK + +F + + G
Sbjct: 299 IQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS 358
Query: 133 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 192
P + Y +LI G K+G + A +L + D G P+ +TY+ ++ +N + + L+
Sbjct: 359 KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALD 418
Query: 193 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 252
+ G + Y ++I K GR+ EA E+M G D YN LI+ +
Sbjct: 419 YFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFT 478
Query: 253 KEGKLEAAYLLLDEMEKQGFECDK--YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
K K++ A L ME++ CD+ YT+TIL+ G+ K + A + M G
Sbjct: 479 KHRKVDEAIALFKRMEEEE-GCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPT 537
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFES---MEVKDSFTYSSMVHNLCKAKRLPSASKLLLS 367
+ + L GK+ A + + M V M++ LCKA R+ A KL
Sbjct: 538 AACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADG 597
Query: 368 CLKSGVRILKSAQKAVVDGLRHSG 391
+ G + + +++ LR G
Sbjct: 598 ITERGREVPGRIRTVMINALRKVG 621
Score = 102 bits (253), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 144/308 (46%), Gaps = 6/308 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I C+ + GYT+ M G P+V Y LI G ++ + ++ LL M++
Sbjct: 332 LVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE 391
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PDV +Y+ +++ L + G+ +EA F L + ++ +++GL K D A
Sbjct: 392 GFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEA 451
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL-GDSGHAPNAITYTTIMK 179
R+F + + G + YN LI K ++ A + K + + G TYT ++
Sbjct: 452 ERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLS 511
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
F+ + + L++ M KG T + + G++ A ++++ GV L
Sbjct: 512 GMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVIL 571
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D + +IN CK G+++ A L D + ++G E T++I+ L K G A L +
Sbjct: 572 D-AACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGK---ADLAM 627
Query: 300 EYM-NKIG 306
+ M +KIG
Sbjct: 628 KLMHSKIG 635
Score = 36.6 bits (83), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 4/126 (3%)
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
Y +L+++ ++ + E++K F LI K G ++ M
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLP 359
+ G + L YN +++ L +D A VFE ME D TY++M+ CKA +
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 360 SASKLL 365
A + L
Sbjct: 275 KAMEKL 280
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 169 bits (427), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 195/399 (48%), Gaps = 4/399 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C +++RM E G P ++T N+L+ G N +S ++ L+D M+E G
Sbjct: 148 LINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETG 207
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+ +Y ++ + + G+ A + + M + ++I+++GLCK+ DNA
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F ++ GF +++ Y LI+G C AGR +L+++ P+ + ++ ++ C
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K + E+ M ++G + D Y ++I F K +L +A ++ MV+ G +I
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++N LIN YCK ++ L +M +G D T+ LI G C+ G ++ A+ +
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M ++ +Y ++D L +G+ + A+ +FE +E D Y+ ++H +C A +
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 507
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 396
+ A L S GV+ ++ GL G EA
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Score = 165 bits (417), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 198/403 (49%), Gaps = 4/403 (0%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
+D + +M GI+ ++ T + +I R LS + + +++++G PD +++
Sbjct: 87 QYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFS 146
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+L++ L G+ EA + M+ P T N ++NGLC N +A+ + + +
Sbjct: 147 TLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVET 206
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
GF P VTY ++K +CK+G+ A +L+++ + +A+ Y+ I+ ++
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA 266
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+ + M+ KG+ D Y T+I F GR + + M+ + D+V+++ LI+
Sbjct: 267 FNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC 326
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+ KEGKL A L EM ++G D T+T LIDG CK + A L+ M G N
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLL 366
+ +N +++ K ID + +F M V D+ TY++++ C+ +L A +L
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 367 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
+ VR + K ++DGL +G +A +I KI +K+
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Score = 159 bits (401), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 163/329 (49%), Gaps = 1/329 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C +D G +L M + I+PDVV +++LI + L + +L EM++ G
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD +Y SL+ + + D+AN + M+ P TFNI++NG CK D+ L
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+FR + G V + VTYN LI+G C+ G+L A+ + +E+ P+ ++Y ++
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
N + + LEI +++ D Y +I ++ +A D + GV+ D+
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDV 527
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN +I CK+G L A LL +ME+ G + T+ ILI G+ + +E
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
+ + GF + +VD L DG++ +
Sbjct: 588 IKRCGFSVDASTVKMVVDMLS-DGRLKKS 615
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 147/296 (49%), Gaps = 4/296 (1%)
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
D+A+ +F+ + + P L+ ++ L + + + + K++ G A N T + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ CC R RK L + + + GY D + T+I GR+ EA + +++MV G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+ +++ N L+N C GK+ A LL+D M + GF+ ++ T+ ++ +CK+G A
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 298 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 353
L M + + Y+ I+D L KDG +D+A N+F ME+K D Y++++ C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 354 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 409
A R +KLL +K + A A++D G REA+++ ++ IS
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Score = 122 bits (305), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 116/225 (51%), Gaps = 1/225 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ YC+ D G + +M G+ D VTYN+LI G L + +L EM+
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ PD+ SY L+ L G+P++A +F+ + + +NI+++G+C D+A
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F L G P++ TYNI+I GLCK G L A + +++ + GH+PN TY +++
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
+++ +KR G++ D ++ + GRLK++
Sbjct: 572 HLGEGDATKSAKLIEEIKRCGFSVDA-STVKMVVDMLSDGRLKKS 615
Score = 41.2 bits (95), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I C D + + + G+ PDV TYN +I G + LS + L +M E
Sbjct: 497 IIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CG---DLTPCTATFNIMLNGLCKNRY 116
G P+ +YN L+ G ++ ++ +++ CG D + +++ +G K +
Sbjct: 557 GHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSF 616
Query: 117 TD 118
D
Sbjct: 617 LD 618
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 182/385 (47%), Gaps = 4/385 (1%)
Query: 29 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 88
P +++L + +L ++ +M + P S N L+H +LGK D+ R
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 89 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 148
F+DMI P T+NIM++ +CK + A +F ++ G VP+ VTYN +I G K
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 149 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 208
GRL +E+ D P+ ITY ++ C + K +GLE MK G +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
Y T++ AF K G +++A + M G+ + +Y +LI+ CK G L A+ L +EM
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
+ G E + T+T LIDGLC A +K A M+ G NL +YN ++ K +D
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 329 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 384
A+ + ++ + D Y + + LC +++ +A ++ + G++ ++
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 385 DGLRHSGCRREAKKIQSKIRMAKIS 409
D SG E + +++ I
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIE 574
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 202/413 (48%), Gaps = 7/413 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID C+ +A + M+ G+ PD VTYNS+I G + L ++ +EM +M
Sbjct: 267 IMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDM 326
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
PDV +YN+L++C + GK +++M L P +++ +++ CK A
Sbjct: 327 CCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQA 386
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ + +++ G VP TY LI CK G L A + E+ G N +TYT ++
Sbjct: 387 IKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDG 446
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K E+ M G + Y +I FVK + A + + ++ G++ D
Sbjct: 447 LCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPD 506
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
++ Y T I C K+EAA ++++EM++ G + + +T L+D K+GN L+
Sbjct: 507 LLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLD 566
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-----VKDSFTYSSMVHNLCKA 355
M ++ + + + ++D L K+ + A++ F + ++ +++M+ LCK
Sbjct: 567 EMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKD 626
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
++ +A+ L ++ G+ ++A +++DG G EA ++ K MA+I
Sbjct: 627 NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK--MAEI 677
Score = 155 bits (392), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 167/337 (49%), Gaps = 1/337 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+DA+C+ MR G+ P+ TY SLI + LS + L +EML++G
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ +V +Y +L+ L + EA +F M + P A++N +++G K + D AL
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ L+ G P+L+ Y I GLC ++ A+ ++ E+ + G N++ YTT+M
Sbjct: 493 ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 552
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLD 240
F++ GL +L MK +C +I K + +A DY ++ D G+Q +
Sbjct: 553 FKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQAN 612
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +I+ CK+ ++EAA L ++M ++G D+ +T L+DG K GN+ A +
Sbjct: 613 AAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRD 672
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M +IG +L AY +V L ++ A + E M
Sbjct: 673 KMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 709
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 160/372 (43%), Gaps = 54/372 (14%)
Query: 57 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD-------------------- 96
M G V SY + H LF +AN V ++M+
Sbjct: 133 MTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGF 192
Query: 97 ------------------------------LTPCTATFNIMLNGLCKNRYTDNALRMFRG 126
+ P T + N +L+ K TD+ R F+
Sbjct: 193 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 252
Query: 127 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 186
+ G P + TYNI+I +CK G + AR + +E+ G P+ +TY +++ + +
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 187 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 246
+ MK D Y +I F K G+L ++ +M +G++ ++VSY+T
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 247 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
L++ +CKEG ++ A +M + G ++YT+T LID CK GN+ A M ++G
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSAS 362
+ N+ Y ++D L ++ A +F M+ + + +Y++++H KAK + A
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 363 KLLLSCLKSGVR 374
+LL G++
Sbjct: 493 ELLNELKGRGIK 504
Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 112/242 (46%), Gaps = 1/242 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + + + D +LN ++ GI PD++ Y + I G + + +++EM E G
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I + Y +LM F+ G P E + +M D+ TF ++++GLCKN+ A+
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 597
Query: 122 RMF-RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
F R G + +I GLCK ++ A + +++ G P+ YT++M
Sbjct: 598 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 657
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
F+ L + M G D Y +++ +L++A ++E+M+ +G+ D
Sbjct: 658 NFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Query: 241 IV 242
V
Sbjct: 718 EV 719
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 166 bits (420), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 192/407 (47%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ YC+F D + ++ M+ G+ P+ Y S+I R L+ + + EM+ G
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD Y +L+ + G A++ F +M D+TP T+ +++G C+ A
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++F + G P+ VT+ LI G CKAG ++ A + + +G +PN +TYTT++
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ E+L M + G + F Y +++ K G ++EA + + G+ D
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+Y TL++ YCK G+++ A +L EM +G + T +L++G C G ++ L +
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G N +N +V + + A +++ M + D TY ++V CKA+
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A L G + S ++ G EA+++ ++R
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 181/388 (46%), Gaps = 8/388 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C+ + M GI PD V Y +LI G + + + EM
Sbjct: 322 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 381
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV +Y +++ Q+G EA ++F +M C L P + TF ++NG CK + +A
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R+ + + G P +VTY LI GLCK G L +A +L E+ G PN TY +I+
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++ + ++++ + G D Y T++ A+ K G + +A + +++M+ G+Q I
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V++N L+N +C G LE LL+ M +G + T L+ C N+K A +
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 357
M G + + Y +V K + A +F+ M+ K TYS ++ K K+
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVD 385
A ++ + G+ +A K + D
Sbjct: 682 FLEAREVFDQMRREGL----AADKEIFD 705
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 174/356 (48%), Gaps = 4/356 (1%)
Query: 48 SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 107
+ ++ + E E+G+ +V SYN ++H + QLG+ EA+ + M TP +++ +
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 108 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 167
+NG C+ D ++ +++ G P Y +I LC+ +L A E+ G
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 168 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 227
P+ + YTT++ + + + M + T D Y +I+ F +IG + EA
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 407
Query: 228 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
+M G++ D V++ LIN YCK G ++ A+ + + M + G + T+T LIDGLC
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 288 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSF 343
K G++ A L M KIG N+ YN IV+ L K G I+ A+ + E D+
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Query: 344 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
TY++++ CK+ + A ++L L G++ +++G G + +K+
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 178/377 (47%), Gaps = 4/377 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++I CQ + +L M G +PDV++Y++++ G R L L++ M
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ + Y S++ L ++ K EA F +MI + P T + +++G CK A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ F + P+++TY +I G C+ G + A + E+ G P+++T+T ++
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ K + + M + G + + Y T+I K G L A + + +M G+Q +
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
I +YN+++N CK G +E A L+ E E G D T+T L+D CK+G + A+ L+
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G + +N +++ G ++ + M K ++ T++S+V C
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 610
Query: 357 RLPSASKLLLSCLKSGV 373
L +A+ + GV
Sbjct: 611 NLKAATAIYKDMCSRGV 627
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 157/337 (46%), Gaps = 37/337 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ YC+ + + N M +AG SP+VVTY +LI G + L + +LL EM ++G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ P++++YNS+++ L + G +EA ++ + L T T+ +++ CK+ D A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-C 180
+ + + G P +VT+N+L+ G C G L +L + G APNA T+ +++K
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C RN LK AT + M + GV D
Sbjct: 607 CIRNN------------------------------------LKAATAIYKDMCSRGVGPD 630
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+Y L+ +CK ++ A+ L EM+ +GF T+++LI G K AR +
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 337
M + G ++ E ++ D K + D ++ + +
Sbjct: 691 QMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 727
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 177/382 (46%), Gaps = 44/382 (11%)
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY-T 117
+ G P V ++ L G EA RVF+ M+ L + N+ L L K+ Y T
Sbjct: 170 DWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 227
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
A+ +FR + G + +YNI+I +C+ GR++ A +L + G+ P+ I+Y+T+
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ R + +++ MKRKG + + Y ++I +I +L EA + +M+ G+
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK---------------------------- 269
D V Y TLI+ +CK G + AA EM
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 407
Query: 270 -------QGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRL 321
+G E D T T LI+G CKAG++K A R+H +M + G N+ Y ++D L
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH-NHMIQAGCSPNVVTYTTLIDGL 466
Query: 322 GKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
K+G +D A + M + FTY+S+V+ LCK+ + A KL+ +G+
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 378 SAQKAVVDGLRHSGCRREAKKI 399
++D SG +A++I
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEI 548
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 75/188 (39%), Gaps = 40/188 (21%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ +C + G +LN M GI+P+ T+NSL+ + L + + +M
Sbjct: 566 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 625
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD +Y +L + G CK R A
Sbjct: 626 GVGPDGKTYENL-----------------------------------VKGHCKARNMKEA 650
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F+ ++ GF + TY++LIKG K + AR + ++ G A + +
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDF---- 706
Query: 181 CFRNRKYK 188
F + KYK
Sbjct: 707 -FSDTKYK 713
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 166 bits (419), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 194/413 (46%), Gaps = 28/413 (6%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD------ 55
L+ AYC Y +L +M + G P V YN LI G+ S + DLLD
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILI-GSICGDKDSLNCDLLDLAEKAY 436
Query: 56 -EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 114
EML G+ + + +S CL GK ++A V ++MI P T+T++ +LN LC
Sbjct: 437 SEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNA 496
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
+ A +F +++ G V ++ TY I++ CKAG + AR E+ + G PN +TY
Sbjct: 497 SKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTY 556
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM-- 232
T ++ + +K E+ M +G + Y +I K G++++A E+M
Sbjct: 557 TALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCG 616
Query: 233 ---VTD-----------GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 278
V D + ++V+Y L++ +CK ++E A LLD M +G E ++
Sbjct: 617 SKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIV 676
Query: 279 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
+ LIDGLCK G + A+ M++ GF + L Y+ ++DR K + D A V M
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736
Query: 339 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 387
+ Y+ M+ LCK + A KL+ + G + A++DG
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 202/431 (46%), Gaps = 61/431 (14%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++D++C+ + N MRE G +P+VVTY +LI + +S + +L + ML
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582
Query: 61 GIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICG--DLT---------------PCT 101
G P++ +Y++L+ HC + G+ ++A ++F+ M CG D+ P
Sbjct: 583 GCLPNIVTYSALIDGHC--KAGQVEKACQIFERM-CGSKDVPDVDMYFKQYDDNSERPNV 639
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
T+ +L+G CK+ + A ++ + G P + Y+ LI GLCK G+L A+ + E
Sbjct: 640 VTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE 699
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ + G TY++++ F+ ++ L ++LS M + Y +I K+G+
Sbjct: 700 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 759
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
EA M+ M G Q ++V+Y +I+ + GK+E LL+ M +G + T+ +
Sbjct: 760 TDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV 819
Query: 282 LIDGLCKAGNIKGARLHLEYM------------------------------NKIGFDSN- 310
LID CK G + A LE M ++IG D
Sbjct: 820 LIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTA 879
Query: 311 --LEAYNCIVDRLGKDGKIDHAINVFESME------VKDSFTYSSMVHNLCKAKRLPSAS 362
L Y ++D L K +++ A+ + E + V S TY+S++ +LC A ++ +A
Sbjct: 880 PFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAF 939
Query: 363 KLLLSCLKSGV 373
+L K GV
Sbjct: 940 QLFSEMTKKGV 950
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 165/353 (46%), Gaps = 16/353 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+++ C + + + M+ G+ DV TY ++ + L+ + +EM E+G
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +Y +L+H + K AN +F+ M+ P T++ +++G CK + A
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608
Query: 122 RMFRGLQKHGFVPEL----------------VTYNILIKGLCKAGRLRTARWILKELGDS 165
++F + VP++ VTY L+ G CK+ R+ AR +L +
Sbjct: 609 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 668
Query: 166 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 225
G PN I Y ++ + K E+ + M G+ + Y ++I + K+ R A
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 728
Query: 226 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 285
+ + +M+ + ++V Y +I+ CK GK + AY L+ ME++G + + T+T +IDG
Sbjct: 729 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 788
Query: 286 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 338
G I+ LE M G N Y ++D K+G +D A N+ E M+
Sbjct: 789 FGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 841
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 188/409 (45%), Gaps = 23/409 (5%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI C+ F+ LNRMR P+VVTY++L+ G L +L+ M+ G
Sbjct: 308 LISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEG 367
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYT--- 117
P +NSL+H G A ++ + M+ CG + P +NI++ +C ++ +
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM-PGYVVYNILIGSICGDKDSLNC 426
Query: 118 ---DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 174
D A + + + G V + + + LC AG+ A +++E+ G P+ TY
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 175 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 234
+ ++ K +L + MKR G D + Y ++ +F K G +++A + +M
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 235 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 294
G ++V+Y LI+ Y K K+ A L + M +G + T++ LIDG CKAG ++
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 295 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCK 354
A E M +++ Y D ++ E + TY +++ CK
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYD---------------DNSERPNVVTYGALLDGFCK 651
Query: 355 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+ R+ A KLL + G + A++DGL G EA+++++++
Sbjct: 652 SHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Score = 138 bits (348), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 161/332 (48%), Gaps = 4/332 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+D +C+ + +L+ M G P+ + Y++LI G + L + ++ EM E G
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P +++Y+SL+ F++ + D A++V M+ P + M++GLCK TD A
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + +++ G P +VTY +I G G++ T +L+ +G G APN +TY ++ C
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 824
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+N + +L MK+ + GY VI F K E+ ++++ D +
Sbjct: 825 CKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFL 882
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY--THTILIDGLCKAGNIKGARLHL 299
Y LI+ K +LE A LL+E+ Y T+ LI+ LC A ++ A
Sbjct: 883 SVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLF 942
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 331
M K G ++++ ++ L ++ KI A+
Sbjct: 943 SEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 172/410 (41%), Gaps = 48/410 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ +C+ SF L R+++ P TYN LI + L + + EM
Sbjct: 205 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 264
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ D ++ + L ++GK EA + + + P T + +++GLC+ + A
Sbjct: 265 NLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEA 321
Query: 121 LRMFRGLQKHGFVPELVTY-----------------------------------NILIKG 145
+ ++ +P +VTY N L+
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381
Query: 146 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK------YKLGLEILSAMKR 199
C +G A +LK++ GH P + Y ++ ++ L + S M
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLA 441
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
G + + G+ ++A + +M+ G D +Y+ ++N C K+E
Sbjct: 442 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMEL 501
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
A+LL +EM++ G D YT+TI++D CKAG I+ AR M ++G N+ Y ++
Sbjct: 502 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIH 561
Query: 320 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
K K+ +A +FE+M + + TYS+++ CKA ++ A ++
Sbjct: 562 AYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 611
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 174/414 (42%), Gaps = 48/414 (11%)
Query: 35 NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 94
N L+ RN S +L+ L + + P +YN L+ + + D A+ + ++M
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 95 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
+L T LCK AL + ++ FVP+ V Y LI GLC+A
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEE 320
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-----YTFDGF-- 207
A L + + PN +TY+T++ C ++ +L+ M +G F+
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380
Query: 208 GYCT---------VIAAFVKIGRLKEATDY-------------------------MEQMV 233
YCT ++ VK G + Y +M+
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 293
GV L+ ++ ++ C GK E A+ ++ EM QGF D T++ +++ LC A ++
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500
Query: 294 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 349
A L E M + G +++ Y +VD K G I+ A F M + TY++++
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560
Query: 350 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
H KAK++ A++L + L G A++DG +G +A +I ++
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 41/231 (17%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+ID C+ D Y ++ M E G P+VVTY ++I G + L+LL+ M G
Sbjct: 750 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 809
Query: 62 IPPDVWSYNSLM-HCLFQLGKPDEANRVFQDM---------------ICG---------- 95
+ P+ +Y L+ HC + G D A+ + ++M I G
Sbjct: 810 VAPNYVTYRVLIDHCC-KNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLG 868
Query: 96 --------DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV----TYNILI 143
D P + + ++++ L K + + ALR+ + F LV TYN LI
Sbjct: 869 LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT--FSATLVDYSSTYNSLI 926
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 194
+ LC A ++ TA + E+ G P ++ +++K FRN K L +L
Sbjct: 927 ESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 78/161 (48%), Gaps = 4/161 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID C+ + D + +L M++ Y +I G + + S L LLDE+ +
Sbjct: 819 VLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIES--LGLLDEIGQD 876
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM--ICGDLTPCTATFNIMLNGLCKNRYTD 118
P + Y L+ L + + + A R+ +++ L ++T+N ++ LC +
Sbjct: 877 DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVE 936
Query: 119 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL 159
A ++F + K G +PE+ ++ LIKGL + ++ A +L
Sbjct: 937 TAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI++ C + + + + M + G+ P++ ++ SLI G RNS +S +L LLD + M
Sbjct: 925 LIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMV 984
Query: 62 IP 63
P
Sbjct: 985 CP 986
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 165 bits (418), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 197/443 (44%), Gaps = 41/443 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI AY + + ++N M G SP V TYN++I G ++ + ++ EML G
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD +Y SL+ + G E +VF DM D+ P F+ M++ ++ D AL
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
F +++ G +P+ V Y ILI+G C+ G + A + E+ G A + +TY TI+
Sbjct: 396 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL 455
Query: 182 FRNRKY------------------------------KLG-----LEILSAMKRKGYTFDG 206
+ + KLG +E+ MK K D
Sbjct: 456 CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDV 515
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T++ F K+G + A + MV+ + +SY+ L+N C +G L A+ + DE
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE 575
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M + + +I G C++GN LE M GF + +YN ++ ++
Sbjct: 576 MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREEN 635
Query: 327 IDHAINVFESME------VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
+ A + + ME V D FTY+S++H C+ ++ A +L ++ GV +S
Sbjct: 636 MSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTY 695
Query: 381 KAVVDGLRHSGCRREAKKIQSKI 403
+++G EA +I ++
Sbjct: 696 TCMINGFVSQDNLTEAFRIHDEM 718
Score = 152 bits (384), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 187/406 (46%), Gaps = 4/406 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI + + + + + + +G+ +V T N ++ ++ + L ++ E G
Sbjct: 206 LIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKG 265
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ PD+ +YN+L+ G +EA + M +P T+N ++NGLCK+ + A
Sbjct: 266 VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAK 325
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + + G P+ TY L+ CK G + + ++ P+ + ++++M
Sbjct: 326 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLF 385
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R+ L +++K G D Y +I + + G + A + +M+ G +D+
Sbjct: 386 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDV 445
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNT+++ CK L A L +EM ++ D YT TILIDG CK GN++ A +
Sbjct: 446 VTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQK 505
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKR 357
M + ++ YN ++D GK G ID A ++ M K+ +YS +V+ LC
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGH 565
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
L A ++ + ++ +++ G SG + + K+
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Score = 135 bits (339), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 169/339 (49%), Gaps = 41/339 (12%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
+ D N ++EAG+ PD V Y LI G R ++S +++L +EML+ G DV +YN
Sbjct: 390 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
+++H L + EA+++F +M L P + T I+++G CK NA+ +F+ +++
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT--------------- 175
++VTYN L+ G K G + TA+ I ++ P I+Y+
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569
Query: 176 --------------TIMKC-------CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
T+M C C R+ G L M +G+ D Y T+I
Sbjct: 570 FRVWDEMISKNIKPTVMICNSMIKGYC-RSGNASDGESFLEKMISEGFVPDCISYNTLIY 628
Query: 215 AFVKIGRLKEATDYMEQMVTD--GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
FV+ + +A +++M + G+ D+ +YN++++ +C++ +++ A ++L +M ++G
Sbjct: 629 GFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGV 688
Query: 273 ECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSN 310
D+ T+T +I+G N+ A R+H E + + GF +
Sbjct: 689 NPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR-GFSPD 726
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 126/277 (45%), Gaps = 37/277 (13%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LID +C+ + + +M+E I DVVTYN+L+ G + + + ++ +M+
Sbjct: 485 ILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK 544
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P SY+ L++ L G EA RV+ +MI ++ P N M+ G C++ +
Sbjct: 545 EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDG 604
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS--GHAPNAITYTTIM 178
+ GFVP+ ++YN LI G + + A ++K++ + G P+ TY +I+
Sbjct: 605 ESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSIL 664
Query: 179 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 238
G+C + ++KEA + +M+ GV
Sbjct: 665 H----------------------------GFC-------RQNQMKEAEVVLRKMIERGVN 689
Query: 239 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 275
D +Y +IN + + L A+ + DEM ++GF D
Sbjct: 690 PDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 137/301 (45%), Gaps = 4/301 (1%)
Query: 69 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 128
++ L+ Q K EA+ F + T N ++ L + + + A +++ +
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 129 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 188
+ G + T NI++ LCK G++ L ++ + G P+ +TY T++ +
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 189 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 248
E+++AM KG++ + Y TVI K G+ + A + +M+ G+ D +Y +L+
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 249 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 308
CK+G + + +M + D + ++ ++GN+ A ++ + + G
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 309 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 364
+ Y ++ + G I A+N+ M + D TY++++H LCK K L A KL
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 365 L 365
Sbjct: 468 F 468
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 130/298 (43%), Gaps = 8/298 (2%)
Query: 102 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 161
+ F++++ + R A F L+ GF + N LI L + G + A + +E
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 225
Query: 162 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 221
+ SG N T ++ ++ K + LS ++ KG D Y T+I+A+ G
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
++EA + M M G + +YNT+IN CK GK E A + EM + G D T+
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 282 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME--- 338
L+ CK G++ M +L ++ ++ + G +D A+ F S++
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 339 -VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
+ D+ Y+ ++ C+ + A L L+ G + ++ GL C+R+
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL----CKRK 459
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 4/200 (2%)
Query: 170 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 229
N + +++ + RK + E + ++ KG+T +I + V+IG ++ A
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 230 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 289
+++ GV +++ + N ++N CK+GK+E L +++++G D T+ LI
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 290 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTY 345
G ++ A + M GF + YN +++ L K GK + A VF M DS TY
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 346 SSMVHNLCKAKRLPSASKLL 365
S++ CK + K+
Sbjct: 344 RSLLMEACKKGDVVETEKVF 363
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 190/383 (49%), Gaps = 11/383 (2%)
Query: 30 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 89
D +++ I A R L L+ M + I P ++ + GKPD+A ++F
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 90 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
+M A+FN +L+ LCK++ + A +FR L+ F + VTYN+++ G C
Sbjct: 150 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLI 208
Query: 150 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 209
R A +LKE+ + G PN TY T++K FR + + E MK++ D Y
Sbjct: 209 KRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 268
Query: 210 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
TV+ F G +K A + ++M+ +GV + +YN +I + CK+ +E A ++ +EM +
Sbjct: 269 TTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVR 328
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 329
+G+E + T+ +LI GL AG ++ M G + N + YN ++ + +++
Sbjct: 329 RGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEK 388
Query: 330 AINVFESMEVKDSF----TYSSMVHNLCKAKR---LPSASKLLLSCLKSGVRILKSAQKA 382
A+ +FE M D TY+ ++ + KR + A KLLL ++ G K
Sbjct: 389 ALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNR 448
Query: 383 VVDGLRHSGCRREAKKI---QSK 402
V++GL +G + AK+I QSK
Sbjct: 449 VLNGLLLTGNQAFAKEILRLQSK 471
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 151/309 (48%), Gaps = 6/309 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
++D C+ + Y + +R S D VTYN ++ G +L++L EM+E G
Sbjct: 167 ILDVLCKSKRVEKAYELFRALR-GRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERG 225
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I P++ +YN+++ F+ G+ A F +M D T+ +++G A
Sbjct: 226 INPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRAR 285
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + + G +P + TYN +I+ LCK + A + +E+ G+ PN TY +++
Sbjct: 286 NVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL 345
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
F ++ G E++ M+ +G + Y +I + + +++A E+M + ++
Sbjct: 346 FHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNL 405
Query: 242 VSYNTLIN-LYCK---EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 297
+YN LI+ ++ + E + A LLL EM ++GF K+T +++GL GN A+
Sbjct: 406 DTYNILISGMFVRKRSEDMVVAGKLLL-EMVERGFIPRKFTFNRVLNGLLLTGNQAFAKE 464
Query: 298 HLEYMNKIG 306
L +K G
Sbjct: 465 ILRLQSKSG 473
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 96/213 (45%), Gaps = 3/213 (1%)
Query: 30 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 89
DVVTY +++ G + + ++ DEM+ G+ P V +YN+++ L + + A +F
Sbjct: 264 DVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMF 323
Query: 90 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
++M+ P T+N+++ GL + + ++ G P TYN++I+ +
Sbjct: 324 EEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSEC 383
Query: 150 GRLRTARWILKELGDSGHAPNAITYTTIMKCCF---RNRKYKLGLEILSAMKRKGYTFDG 206
+ A + +++G PN TY ++ F R+ + ++L M +G+
Sbjct: 384 SEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRK 443
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
F + V+ + G A + + G +L
Sbjct: 444 FTFNRVLNGLLLTGNQAFAKEILRLQSKSGSRL 476
Score = 33.9 bits (76), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGA---TRNSLLSCSLDLLDEM 57
M+I Y + + + +M P++ TYN LI+G R+ + + LL EM
Sbjct: 375 MMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEM 434
Query: 58 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 90
+E G P +++N +++ L G A + +
Sbjct: 435 VERGFIPRKFTFNRVLNGLLLTGNQAFAKEILR 467
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 164 bits (414), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 203/421 (48%), Gaps = 17/421 (4%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++ +CQ + L +M + G PD+VT+ SLI G + + ++ ++++M+EM
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
GI PDV Y +++ L + G + A +F M + P + ++NGLC + +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI--- 177
+ RG+ K P+++T+N LI K G+ A + E+ APN TYT++
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 178 --MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
M+ C + ++ M+ KG D Y ++I F K ++ +A +M
Sbjct: 292 FCMEGCVDEAR-----QMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK 346
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G+ + ++Y TLI + + GK A + M +G + T+ +L+ LC G +K A
Sbjct: 347 GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKA 406
Query: 296 RLHLEYMNKIGFD---SNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSM 348
+ E M K D N+ YN ++ L +GK++ A+ VFE M ++ TY+ +
Sbjct: 407 LMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTII 466
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+ +CKA ++ +A L S GV+ ++ GL G + EA + K++ +
Sbjct: 467 IQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Query: 409 S 409
S
Sbjct: 527 S 527
Score = 148 bits (374), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 175/394 (44%), Gaps = 42/394 (10%)
Query: 10 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 69
+ F+ + M E+ P ++ + L+ + ++L D + MG+ D+++
Sbjct: 51 LQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTC 110
Query: 70 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG------------------- 110
N LM+C Q +P A+ M+ P TF ++NG
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 111 ----------------LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 154
LCKN + + AL +F ++ +G P++V Y L+ GLC +GR R
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 155 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 214
A +L+ + P+ IT+ ++ + K+ E+ + M R + F Y ++I
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 215 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 274
F G + EA M T G D+V+Y +LIN +CK K++ A + EM ++G
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 275 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 334
+ T+T LI G + G A+ +M G N+ YN ++ L +GK+ A+ +F
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 335 ESMEVKDS-------FTYSSMVHNLCKAKRLPSA 361
E M+ ++ +TY+ ++H LC +L A
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 137/300 (45%), Gaps = 5/300 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F + N L K + AL R L +V Y +++ + + A + +
Sbjct: 6 FQLHRNRLVKGN-SGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMV 64
Query: 164 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 223
+S P+ I +T ++ + +K+ + + + ++ G + D + ++ F + +
Sbjct: 65 ESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPY 124
Query: 224 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 283
A+ ++ +M+ G + DIV++ +LIN +C ++E A ++++M + G + D +T +I
Sbjct: 125 LASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTII 184
Query: 284 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 340
D LCK G++ A + M G ++ Y +V+ L G+ A ++ M +
Sbjct: 185 DSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK 244
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 399
D T+++++ K + A +L ++ + ++++G GC EA+++
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
>sp|Q9SAD9|PPR40_ARATH Pentatricopeptide repeat-containing protein At1g13040,
mitochondrial OS=Arabidopsis thaliana GN=At1g13040 PE=2
SV=1
Length = 517
Score = 164 bits (414), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 174/369 (47%), Gaps = 5/369 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
I C+ FD +L+ M G PD+ +N + R + + ++ M++ G
Sbjct: 85 FISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRG 144
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PDV SY L++ LF+ GK +A ++ MI ++P ++ GLC R D A
Sbjct: 145 REPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAY 204
Query: 122 RMFRGLQKHGFVP-ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
M K V V YN LI G CKAGR+ A + + G P+ +TY ++
Sbjct: 205 EMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNY 264
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
+ N K +++ M R G D + Y ++ ++ + ++M + + D
Sbjct: 265 YYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCD 324
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+VSY+TLI +C+ AY L +EM ++G + T+T LI + GN A+ L+
Sbjct: 325 VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLD 384
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EV-KDSFTYSSMVHNLCKAK 356
M ++G + Y I+D L K G +D A VF M E+ D+ +Y+S++ LC++
Sbjct: 385 QMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSG 444
Query: 357 RLPSASKLL 365
R+ A KL
Sbjct: 445 RVTEAIKLF 453
Score = 115 bits (287), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 139/292 (47%), Gaps = 12/292 (4%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ + + + M + G PD+VTYN L+ N++L + ++ EM+ G
Sbjct: 226 LISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSG 285
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTP---C-TATFNIMLNGLCKNR 115
I D +SYN L+ HC ++ PD+ + + ++ P C +++ ++ C+
Sbjct: 286 IQLDAYSYNQLLKRHC--RVSHPDKC----YNFMVKEMEPRGFCDVVSYSTLIETFCRAS 339
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
T A R+F +++ G V +VTY LIK + G A+ +L ++ + G +P+ I YT
Sbjct: 340 NTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYT 399
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
TI+ ++ + + M T D Y ++I+ + GR+ EA E M
Sbjct: 400 TILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGK 459
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 287
D +++ +I + KL AAY + D+M +GF D+ LI C
Sbjct: 460 ECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 144/310 (46%), Gaps = 7/310 (2%)
Query: 2 LIDAYCQFVSFDAGYTIL-NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
L+ C D Y ++ ++ A + V YN+LI+G + + + L M ++
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKI 249
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G PD+ +YN L++ + A V +M+ + ++N +L C+ + D
Sbjct: 250 GCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKC 309
Query: 121 LR-MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
M + ++ GF ++V+Y+ LI+ C+A R A + +E+ G N +TYT+++K
Sbjct: 310 YNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIK 368
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
R + ++L M G + D Y T++ K G + +A M+ +
Sbjct: 369 AFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITP 428
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHTILIDGLCKAGNIKGARL 297
D +SYN+LI+ C+ G++ A L ++M +G EC D+ T +I GL + + A
Sbjct: 429 DAISYNSLISGLCRSGRVTEAIKLFEDM--KGKECCPDELTFKFIIGGLIRGKKLSAAYK 486
Query: 298 HLEYMNKIGF 307
+ M GF
Sbjct: 487 VWDQMMDKGF 496
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 126/292 (43%), Gaps = 5/292 (1%)
Query: 68 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+Y S + L + G D A +VF +M + +N + L + + A ++ +
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
+ GF TY+ I GLCK + +L ++ G P+ + + R K
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKV 130
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
++ M ++G D Y +I + G++ +A + M+ GV D + L
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAAL 190
Query: 248 INLYCKEGKLEAAY-LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 306
+ C K++ AY ++ +E++ + + LI G CKAG I+ A YM+KIG
Sbjct: 191 VVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIG 250
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 354
+ +L YN +++ + + A V M D+++Y+ ++ C+
Sbjct: 251 CEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCR 302
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 104/233 (44%), Gaps = 5/233 (2%)
Query: 137 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 196
+ Y I L K+G + A + E+ S + + Y + R +++L I
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 197 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 256
MK G++ F Y I+ K+ + + M T G DI ++N ++L C+E K
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 257 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 316
+ A M ++G E D ++TILI+GL +AG + A M + G + +A
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189
Query: 317 IVDRLGKDGKIDHAINV----FESMEVK-DSFTYSSMVHNLCKAKRLPSASKL 364
+V L K+D A + +S VK + Y++++ CKA R+ A L
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEAL 242
>sp|Q9SAJ5|PP133_ARATH Pentatricopeptide repeat-containing protein At1g79540
OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1
Length = 780
Score = 164 bits (414), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 167/340 (49%), Gaps = 1/340 (0%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL-SCSLDLLDEMLE 59
+LI AY + + RM+E PDV TYN ++ R + + + +EML+
Sbjct: 132 VLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLK 191
Query: 60 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
P+++++ LM L++ G+ +A ++F DM ++P T+ I+++GLC+ D+
Sbjct: 192 CNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADD 251
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 179
A ++F +Q G P+ V +N L+ G CK GR+ A +L+ G Y++++
Sbjct: 252 ARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLID 311
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
FR R+Y E+ + M +K D Y +I K G++++A + M + G+
Sbjct: 312 GLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISP 371
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
D YN +I C G LE L EM + D THTILI +C+ G ++ A
Sbjct: 372 DTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIF 431
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 339
+ K G ++ +N ++D L K G++ A + MEV
Sbjct: 432 TEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEV 471
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 188/416 (45%), Gaps = 48/416 (11%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++ID + D + L ++ G+S D + LI+ + + +++ M E
Sbjct: 97 LVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEF 156
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDE-----ANRVFQDMICGDLTPCTATFNIMLNGLCKNR 115
PDV++YN ++ + + +E A V+ +M+ + +P TF I+++GL K
Sbjct: 157 DCRPDVFTYNVILRVMMR----EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKG 212
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
T +A +MF + G P VTY ILI GLC+ G AR + E+ SG+ P+++ +
Sbjct: 213 RTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHN 272
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
++ DGF K+GR+ EA + + D
Sbjct: 273 ALL--------------------------DGF---------CKLGRMVEAFELLRLFEKD 297
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G L + Y++LI+ + + A+ L M K+ + D +TILI GL KAG I+ A
Sbjct: 298 GFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDA 357
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHN 351
L M G + YN ++ L G ++ + + E+ D+ T++ ++ +
Sbjct: 358 LKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICS 417
Query: 352 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
+C+ + A ++ KSG + A++DGL SG +EA+ + K+ + +
Sbjct: 418 MCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGR 473
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 182/437 (41%), Gaps = 46/437 (10%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID + + + + M + I PD++ Y LI G ++ + +L LL M G
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKG 368
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PD + YN+++ L G +E + +M + P T I++ +C+N A
Sbjct: 369 ISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAE 428
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL------------------- 162
+F ++K G P + T+N LI GLCK+G L+ AR +L ++
Sbjct: 429 EIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRS 488
Query: 163 --------------------GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 202
D+G +P+ ++Y ++ R L++L+ ++ KG
Sbjct: 489 FDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGL 548
Query: 203 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 262
+ D Y T+I ++GR +EA D + Y +L+ C++ K+ A+
Sbjct: 549 SPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKVLVAFN 606
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 322
L + K+ D T I+ K G + A L ++ + L Y + L
Sbjct: 607 LWMKYLKKISCLDDETAN-EIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLC 665
Query: 323 KDGKIDHAINVFESMEVKDSFTYSS----MVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
+ G+ A+ VF + K ++H LCK ++L +A ++ L L + +++
Sbjct: 666 QSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPR 725
Query: 379 AQKAVVDGLRHSGCRRE 395
++ L S + E
Sbjct: 726 VCNYLLSSLLESTEKME 742
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 125/302 (41%), Gaps = 5/302 (1%)
Query: 104 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 163
F ++++ L ++ D + L+ G + + +LI K G A +
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 164 DSGHAPNAITYTTIMKCCFRNRKY-KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 222
+ P+ TY I++ R + L + + M + + + + + ++ K GR
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 223 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 282
+A + M G+ + V+Y LI+ C+ G + A L EM+ G D H L
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNAL 274
Query: 283 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 340
+DG CK G + A L K GF L Y+ ++D L + + A ++ +M K
Sbjct: 275 LDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNI 334
Query: 341 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 398
D Y+ ++ L KA ++ A KLL S G+ AV+ L G E +
Sbjct: 335 KPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRS 394
Query: 399 IQ 400
+Q
Sbjct: 395 LQ 396
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 194/407 (47%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ + +D ++ +M+ GI P + T N ++ +S + L +M+++G
Sbjct: 89 LLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLG 148
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
PD+ ++ SL++ + ++A +F ++ P T+ ++ LCKNR+ ++A+
Sbjct: 149 FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+F + +G P +VTYN L+ GLC+ GR A W+L+++ PN IT+T ++
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAF 268
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ K E+ + M + D F Y ++I G L EA M +G +
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V Y TLI+ +CK ++E + EM ++G + T+T+LI G C G A+
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKR 357
M+ ++ YN ++D L +GK++ A+ +FE M ++ TY+ ++ +CK +
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A L S G++ ++ G G EA + K++
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495
Score = 155 bits (391), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 178/349 (51%), Gaps = 1/349 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ YC + + + +++ G P+VVTY +LI +N L+ +++L ++M G
Sbjct: 159 LLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNG 218
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V +YN+L+ L ++G+ +A + +DM+ + P TF +++ K A
Sbjct: 219 SRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAK 278
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
++ + + P++ TY LI GLC G L AR + + +G PN + YTT++
Sbjct: 279 ELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGF 338
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
++++ + G++I M +KG + Y +I + +GR A + QM + DI
Sbjct: 339 CKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDI 398
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
+YN L++ C GK+E A ++ + M K+ + + T+TI+I G+CK G ++ A
Sbjct: 399 RTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCS 458
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVH 350
+ G N+ Y ++ + G I A ++F+ M+ +D F + V+
Sbjct: 459 LFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK-EDGFLPNESVY 506
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 154/337 (45%), Gaps = 4/337 (1%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
+Y ++ N + +LDL M+ P + + L+ + ++ + D +F+ M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
+ P T NI+++ +C + A + K GF P+LVT+ L+ G C R+
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 153 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 212
A + ++ G PN +TYTT+++C +NR +E+ + M G + Y +
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 213 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 272
+ +IGR +A + M+ ++ +++++ LI+ + K GKL A L + M +
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 273 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 332
D +T+ LI+GLC G + AR M + G N Y ++ K +++ +
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349
Query: 333 VFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 365
+F M V ++ TY+ ++ C R A ++
Sbjct: 350 IFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI YC D + N+M PD+ TYN L+ G N + +L + + M +
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR 427
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
+ ++ +Y ++ + +LGK ++A +F + + P T+ M++G C+ A
Sbjct: 428 EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEA 487
Query: 121 LRMFRGLQKHGFVPELVTY 139
+F+ +++ GF+P Y
Sbjct: 488 DSLFKKMKEDGFLPNESVY 506
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 192/371 (51%), Gaps = 10/371 (2%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
S D Y + M I P+V T+N +I + ++ + D++++M G P+V SYN
Sbjct: 204 SADVEY-VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYN 262
Query: 71 SLMHCLFQLG---KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 127
+L+ +LG K +A+ V ++M+ D++P TFNI+++G K+ ++++F+ +
Sbjct: 263 TLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM 322
Query: 128 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 187
P +++YN LI GLC G++ A + ++ +G PN ITY ++ +N
Sbjct: 323 LDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDML 382
Query: 188 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 247
K L++ ++K +G Y +I A+ K+G++ + E+M +G+ D+ +YN L
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442
Query: 248 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 307
I C+ G +EAA L D++ +G D T IL++G C+ G + A + L+ M+K+G
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL 501
Query: 308 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSAS 362
YN ++ K+G + A N+ ME + +Y+ ++ + +L A+
Sbjct: 502 KPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDAN 561
Query: 363 KLLLSCLKSGV 373
LL L+ G+
Sbjct: 562 MLLNEMLEKGL 572
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 171/336 (50%), Gaps = 9/336 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATR---NSLLSCSLDLLDEM 57
++I+A C+ + ++ M+ G SP+VV+YN+LI G + N + + +L EM
Sbjct: 228 VVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEM 287
Query: 58 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 117
+E + P++ ++N L+ ++ + +VF++M+ D+ P ++N ++NGLC
Sbjct: 288 VENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKI 347
Query: 118 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 177
A+ M + G P L+TYN LI G CK L+ A + + G P Y +
Sbjct: 348 SEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNML 407
Query: 178 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 237
+ + K G + M+R+G D Y +IA + G ++ A +Q+ + G+
Sbjct: 408 IDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467
Query: 238 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-- 295
D+V+++ L+ YC++G+ A +LL EM K G + T+ I++ G CK GN+K A
Sbjct: 468 P-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATN 526
Query: 296 -RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
R +E ++ N+ +YN ++ + GK++ A
Sbjct: 527 MRTQMEKERRLRM--NVASYNVLLQGYSQKGKLEDA 560
Score = 148 bits (373), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 161/337 (47%), Gaps = 40/337 (11%)
Query: 2 LIDAYCQFVSFDAGY---TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 58
LID YC+ Y +L M E +SP++ T+N LI G ++ L S+ + EML
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 323
Query: 59 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 118
+ + P+V SYNSL++ L GK EA + M+ + P T+N ++NG CKN
Sbjct: 324 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 383
Query: 119 NALRMF-----------------------------------RGLQKHGFVPELVTYNILI 143
AL MF +++ G VP++ TYN LI
Sbjct: 384 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443
Query: 144 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 203
GLC+ G + A+ + +L G P+ +T+ +M+ R + + +L M + G
Sbjct: 444 AGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502
Query: 204 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYL 262
Y V+ + K G LK AT+ QM + +++++ SYN L+ Y ++GKLE A +
Sbjct: 503 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 562
Query: 263 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
LL+EM ++G ++ T+ I+ + + G + HL
Sbjct: 563 LLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHL 599
Score = 135 bits (340), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 176/386 (45%), Gaps = 11/386 (2%)
Query: 30 DVVTYNSLIA-----GATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 84
D V NS+IA NS + G S LM L + + +
Sbjct: 147 DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSAD 206
Query: 85 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 144
V+++MI + P TFN+++N LCK + A + ++ +G P +V+YN LI
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLID 266
Query: 145 GLCK---AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
G CK G++ A +LKE+ ++ +PN T+ ++ +++ +++ M +
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD 326
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ Y ++I G++ EA ++MV+ GVQ ++++YN LIN +CK L+ A
Sbjct: 327 VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEAL 386
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+ ++ QG + +LID CK G I E M + G ++ YNC++ L
Sbjct: 387 DMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL 446
Query: 322 GKDGKIDHAINVFESMEVK---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 378
++G I+ A +F+ + K D T+ ++ C+ A+ LL K G++
Sbjct: 447 CRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHL 506
Query: 379 AQKAVVDGLRHSGCRREAKKIQSKIR 404
V+ G G + A +++++
Sbjct: 507 TYNIVMKGYCKEGNLKAATNMRTQME 532
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 161/367 (43%), Gaps = 9/367 (2%)
Query: 42 TRNSLLSCSLDLLDEMLEMGIPPDVWS-YNSLMHCLFQLGKPDEANRVFQDM-ICGDLTP 99
+NS +S SL+L ++L +S S + + G + + +F + +C ++
Sbjct: 92 VKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCV 151
Query: 100 CTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL 159
+ ++++ N + F+ +G+ ++ L+ L K R ++
Sbjct: 152 NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVY 211
Query: 160 KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 219
KE+ PN T+ ++ + K +++ MK G + + Y T+I + K+
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271
Query: 220 ---GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 276
G++ +A +++MV + V ++ ++N LI+ + K+ L + + EM Q + +
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNV 331
Query: 277 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
++ LI+GLC G I A + M G NL YN +++ K+ + A+++F S
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS 391
Query: 337 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 392
++ V + Y+ ++ CK ++ L + G+ ++ GL +G
Sbjct: 392 VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN 451
Query: 393 RREAKKI 399
AKK+
Sbjct: 452 IEAAKKL 458
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 7/180 (3%)
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G +L +S L+ KE + + EM ++ + + +T ++I+ LCK G + A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVD---RLGKDGKIDHAINVFESMEVKDS----FTYSSM 348
R +E M G N+ +YN ++D +LG +GK+ A V + M D T++ +
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 349 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 408
+ K LP + K+ L V+ + ++++GL + G EA ++ K+ A +
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362
>sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protein At2g32630
OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1
Length = 624
Score = 162 bits (409), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 169/355 (47%), Gaps = 4/355 (1%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I+AY + F +L M++ G+ + VTY L+ + +N +S + L DEM E G
Sbjct: 265 IINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERG 324
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I DV Y SL+ + G A +F ++ L+P + T+ +++G+CK A
Sbjct: 325 IESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAE 384
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ +Q G V +N LI G C+ G + A I + G + T TI C
Sbjct: 385 ILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCF 444
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
R ++Y + L M G Y +I + K G ++EA +M + GVQ +
Sbjct: 445 NRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNA 504
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
++YN +I YCK+GK++ A L ME G + D YT+T LI G C A N+ A
Sbjct: 505 ITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSE 564
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 352
M G D N Y ++ L K GK D A +++ M+ K D+ Y++++ ++
Sbjct: 565 MGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 148 bits (374), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 177/394 (44%), Gaps = 5/394 (1%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
++++ C+ + ++ GI P+ TYN++I + S +L M +
Sbjct: 229 IVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKD 288
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ + +Y LM + GK +A ++F +M + + +++ C+ A
Sbjct: 289 GVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRA 348
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+F L + G P TY LI G+CK G + A ++ E+ G + + T++
Sbjct: 349 FLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDG 408
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
R I M++KG+ D F T+ + F ++ R EA ++ +M+ GV+L
Sbjct: 409 YCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLS 468
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
VSY LI++YCKEG +E A L EM +G + + T+ ++I CK G IK AR
Sbjct: 469 TVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRA 528
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
M G D + Y ++ +D A+ +F M +K +S TY+ M+ L KA
Sbjct: 529 NMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAG 588
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 390
+ A L + G I A++ G HS
Sbjct: 589 KSDEAFGLYDEMKRKGYTIDNKVYTALI-GSMHS 621
Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 163/325 (50%), Gaps = 6/325 (1%)
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
G +E RVF M+ L+ + + L K R D L +FR + G + +
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE-ILSAMK 198
I+++GLC+ G + ++ ++KE G P A TY TI+ + R + G+E +L MK
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFS-GVEGVLKVMK 286
Query: 199 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 258
+ G ++ Y ++ VK G++ +A ++M G++ D+ Y +LI+ C++G ++
Sbjct: 287 KDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMK 346
Query: 259 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 318
A+LL DE+ ++G YT+ LIDG+CK G + A + + M G + +N ++
Sbjct: 347 RAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLI 406
Query: 319 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 374
D + G +D A +++ ME K D FT +++ + KR A + L ++ GV+
Sbjct: 407 DGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVK 466
Query: 375 ILKSAQKAVVDGLRHSGCRREAKKI 399
+ + ++D G EAK++
Sbjct: 467 LSTVSYTNLIDVYCKEGNVEEAKRL 491
Score = 141 bits (356), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 187/424 (44%), Gaps = 39/424 (9%)
Query: 12 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 71
F+ G + + M + G+S D + + A + + L++ M++ G+ V+S
Sbjct: 170 FEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTI 229
Query: 72 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 131
++ L + G+ +++ ++ ++ + P T+N ++N K R + + ++K G
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG 289
Query: 132 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 191
V VTY +L++ K G++ A + E+ + G + YT+++ R K
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAF 349
Query: 192 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 251
+ + KG + + Y +I K+G + A M +M + GV + V +NTLI+ Y
Sbjct: 350 LLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGY 409
Query: 252 CKEGKLEAAYLLLDEMEKQGFECDKYT--------------------------------- 278
C++G ++ A ++ D ME++GF+ D +T
Sbjct: 410 CRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLST 469
Query: 279 --HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
+T LID CK GN++ A+ M+ G N YN ++ K GKI A + +
Sbjct: 470 VSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRAN 529
Query: 337 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 392
ME DS+TY+S++H C A + A +L G+ ++ GL +G
Sbjct: 530 MEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGK 589
Query: 393 RREA 396
EA
Sbjct: 590 SDEA 593
>sp|Q9LMY5|PPR41_ARATH Putative pentatricopeptide repeat-containing protein At1g13630
OS=Arabidopsis thaliana GN=At1g13630 PE=2 SV=3
Length = 826
Score = 161 bits (408), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 174/340 (51%), Gaps = 9/340 (2%)
Query: 33 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 92
TY++++ G R L ++ L I P V S+NS+M +LG D A F +
Sbjct: 231 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 290
Query: 93 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 152
+ L P + NI++NGLC AL + + KHG P+ VTYNIL KG G +
Sbjct: 291 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 350
Query: 153 RTARWILKELGDSGHAPNAITYTTIM--KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 210
A +++++ D G +P+ ITYT ++ +C N +GL +L M +G+ + C
Sbjct: 351 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN--IDMGLVLLKDMLSRGFELNSIIPC 408
Query: 211 TV-IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 269
+V ++ K GR+ EA QM DG+ D+V+Y+ +I+ CK GK + A L DEM
Sbjct: 409 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 468
Query: 270 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 329
+ + TH L+ GLC+ G + AR L+ + G ++ YN ++D K G I+
Sbjct: 469 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 528
Query: 330 AINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 365
A+ +F E+ T++S+++ CK + + A K+L
Sbjct: 529 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 568
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 184/392 (46%), Gaps = 26/392 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI+ C S + + M + G+ PD VTYN L G ++S + +++ +ML+
Sbjct: 304 ILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK 363
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-----GDLTPCTATFNIMLNGLCKNR 115
G+ PDV +Y L+ QLG D + +DM+ + PC+ +ML+GLCK
Sbjct: 364 GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS----VMLSGLCKTG 419
Query: 116 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 175
D AL +F ++ G P+LV Y+I+I GLCK G+ A W+ E+ D PN+ T+
Sbjct: 420 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 479
Query: 176 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 235
++ + +L ++ G T D Y VI + K G ++EA + + ++
Sbjct: 480 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 539
Query: 236 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
G+ + ++N+LI YCK + A +LD ++ G ++T L+D GN K
Sbjct: 540 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 599
Query: 296 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK---IDHAI--NVFE-------SMEVK--- 340
M G Y+ I L + K +H + +FE ME +
Sbjct: 600 DELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 659
Query: 341 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 371
D TY++++ LC+ K L S + + L +KS
Sbjct: 660 PDQITYNTIIQYLCRVKHL-SGAFVFLEIMKS 690
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 179/388 (46%), Gaps = 24/388 (6%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+++ C+ D ++ N+M+ G+SPD+V Y+ +I G + +L L DEM +
Sbjct: 410 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 469
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P+ ++ +L+ L Q G EA + +I T +NI+++G K+ + A
Sbjct: 470 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 529
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
L +F+ + + G P + T+N LI G CK + AR IL + G AP+ ++YTT+M
Sbjct: 530 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 589
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ--------- 231
K E+ MK +G Y + + + + + +
Sbjct: 590 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 649
Query: 232 ---MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 288
M ++G+ D ++YNT+I C+ L A++ L+ M+ + + T+ ILID LC
Sbjct: 650 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCV 709
Query: 289 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-------EVKD 341
G I+ A + + + + AY ++ G + A+ +F + ++D
Sbjct: 710 YGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRD 769
Query: 342 SFTYSSMVHNLCKAKRLPSASKLLLSCL 369
YS++++ LC+ + L + SK CL
Sbjct: 770 ---YSAVINRLCR-RHLVNESKFFF-CL 792
Score = 128 bits (321), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 186/433 (42%), Gaps = 56/433 (12%)
Query: 14 AGYTILNRMREAGISPDVVTYNSLIAGATR---------------------NSLLSCS-- 50
+ ++ M + G+SPDV+TY L+ G + NS++ CS
Sbjct: 352 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 411
Query: 51 -------------LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 97
L L ++M G+ PD+ +Y+ ++H L +LGK D A ++ +M +
Sbjct: 412 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 471
Query: 98 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 157
P + T +L GLC+ A + L G ++V YNI+I G K+G + A
Sbjct: 472 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 531
Query: 158 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 217
+ K + ++G P+ T+ +++ + + +IL +K G Y T++ A+
Sbjct: 532 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 591
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE----------- 266
G K + +M +G+ V+Y+ + C+ K E +L E
Sbjct: 592 NCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLR 651
Query: 267 -MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 325
ME +G D+ T+ +I LC+ ++ GA + LE M D++ YN ++D L G
Sbjct: 652 DMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYG 711
Query: 326 KIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 381
I A + S++ ++ F Y++++ C A KL L G +
Sbjct: 712 YIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYS 771
Query: 382 AVVDGLRHSGCRR 394
AV++ L CRR
Sbjct: 772 AVINRL----CRR 780
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 141/310 (45%), Gaps = 16/310 (5%)
Query: 17 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 76
++L+ + +G + D+V YN +I G ++ + +L+L ++E GI P V ++NSL++
Sbjct: 496 SLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGY 555
Query: 77 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL--CKNRYTDNALRMFRGLQKHGFVP 134
+ EA ++ + L P ++ +++ C N + + LR R ++ G P
Sbjct: 556 CKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR--REMKAEGIPP 613
Query: 135 ELVTYNILIKGLCKAGRLRTARWILKE------------LGDSGHAPNAITYTTIMKCCF 182
VTY+++ KGLC+ + +L+E + G P+ ITY TI++
Sbjct: 614 TNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLC 673
Query: 183 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 242
R + L MK + Y +I + G +++A ++ + V L
Sbjct: 674 RVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKF 733
Query: 243 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 302
+Y TLI +C +G E A L ++ +GF ++ +I+ LC+ + ++ M
Sbjct: 734 AYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLM 793
Query: 303 NKIGFDSNLE 312
G +L+
Sbjct: 794 LSQGISPDLD 803
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 138/328 (42%), Gaps = 53/328 (16%)
Query: 115 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW-ILKELGDSGHAPNAIT 173
R D++L + + ++ +YN ++ + ++ W + KE+ D N T
Sbjct: 180 RMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKM----WDVYKEIKDK----NEHT 231
Query: 174 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 233
Y+T++ R +K + + L + K + ++++ + K+G + A + ++
Sbjct: 232 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 291
Query: 234 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY---------------- 277
G+ + S+N LIN C G + A L +M K G E D
Sbjct: 292 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 351
Query: 278 -------------------THTILIDGLCKAGNIKGARLHLEYMNKIGFDSN-LEAYNCI 317
T+TIL+ G C+ GNI + L+ M GF+ N + + +
Sbjct: 352 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 411
Query: 318 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 373
+ L K G+ID A+++F M+ D YS ++H LCK + A L L
Sbjct: 412 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA--LWLYDEMCDK 469
Query: 374 RILKSAQK--AVVDGLRHSGCRREAKKI 399
RIL +++ A++ GL G EA+ +
Sbjct: 470 RILPNSRTHGALLLGLCQKGMLLEARSL 497
Score = 36.6 bits (83), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/146 (18%), Positives = 58/146 (39%), Gaps = 4/146 (2%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
+I C+ + L M+ + TYN LI + + + + E
Sbjct: 668 IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQN 727
Query: 62 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 119
+ ++Y +L+ HC+ G P+ A ++F ++ ++ ++N LC+ +
Sbjct: 728 VSLSKFAYTTLIKAHCV--KGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNE 785
Query: 120 ALRMFRGLQKHGFVPELVTYNILIKG 145
+ F + G P+L ++IK
Sbjct: 786 SKFFFCLMLSQGISPDLDICEVMIKS 811
Score = 32.7 bits (73), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 42/224 (18%), Positives = 93/224 (41%), Gaps = 26/224 (11%)
Query: 199 RKGYTFDGFGYCTVIAAFVKIG--RLKEATDYMEQMVTD-GVQLDIVS------------ 243
R Y F + T++ + V G R KE +EQ++ + G +++S
Sbjct: 109 RDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTLCELLSNSFRKWESTGLV 168
Query: 244 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 303
++ L+ L + ++ + +L +M+ Q ++ ++ + + ++
Sbjct: 169 WDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIK--- 225
Query: 304 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLP 359
D N Y+ +VD L + K++ A+ + E KD +++S++ CK +
Sbjct: 226 ----DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVD 281
Query: 360 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
A + LK G+ + +++GL G EA ++ S +
Sbjct: 282 MAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM 325
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 161 bits (408), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 156/294 (53%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L++ +C F ++++++ G P+VV YN++I ++ +LD+L M +MG
Sbjct: 155 LVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMG 214
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
I PDV +YNSL+ LF G + R+ DM+ ++P TF+ +++ K A
Sbjct: 215 IRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAK 274
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + + + P +VTYN LI GLC G L A+ +L L G PNA+TY T++
Sbjct: 275 KQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGY 334
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ ++ G++IL M R G D F Y T+ + + G+ A + +MV+ GV D+
Sbjct: 335 CKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDM 394
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 295
++N L++ C GK+ A + L++++K T+ I+I GLCKA ++ A
Sbjct: 395 YTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDA 448
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 195/407 (47%), Gaps = 4/407 (0%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
L+ A + ++A ++ + GIS D+ ++ +LI R + LS +L L +M+++G
Sbjct: 85 LLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLG 144
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P + ++ SL++ + + EA + ++ P +N +++ LC+ + AL
Sbjct: 145 FEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTAL 204
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
+ + ++K G P++VTYN LI L +G + IL ++ G +P+ IT++ ++
Sbjct: 205 DVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVY 264
Query: 182 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 241
+ + + + M ++ + Y ++I G L EA + +V+ G +
Sbjct: 265 GKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNA 324
Query: 242 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 301
V+YNTLIN YCK +++ +L M + G + D +T+ L G C+AG A L
Sbjct: 325 VTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGR 384
Query: 302 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 357
M G ++ +N ++D L GKI A+ E ++ V TY+ ++ LCKA +
Sbjct: 385 MVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADK 444
Query: 358 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
+ A L S GV ++ GLR REA ++ K++
Sbjct: 445 VEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQ 491
Score = 112 bits (279), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 102/199 (51%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C D +LN + G P+ VTYN+LI G + + + +L M G
Sbjct: 295 LINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDG 354
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
+ D ++YN+L Q GK A +V M+ + P TFNI+L+GLC + AL
Sbjct: 355 VDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKAL 414
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
LQK V ++TYNI+IKGLCKA ++ A ++ L G +P+ ITY T+M
Sbjct: 415 VRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGL 474
Query: 182 FRNRKYKLGLEILSAMKRK 200
R R ++ E+ M+++
Sbjct: 475 RRKRLWREAHELYRKMQKE 493
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 81/201 (40%), Gaps = 31/201 (15%)
Query: 209 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 268
+ ++ A K+ + + + G+ D+ S+ TLI+ +C+ +L A L +M
Sbjct: 82 FSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMM 141
Query: 269 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 328
K GFE T L++G C A ++ + +G++ N+ YN I+D
Sbjct: 142 KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIID--------- 192
Query: 329 HAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 388
+LC+ ++ +A +L K G+R +++ L
Sbjct: 193 ----------------------SLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLF 230
Query: 389 HSGCRREAKKIQSKIRMAKIS 409
HSG + +I S + IS
Sbjct: 231 HSGTWGVSARILSDMMRMGIS 251
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 198/438 (45%), Gaps = 37/438 (8%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI A C DA + + M E G P+ T+ L+ G + L L+LL+ M
Sbjct: 152 LLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESF 211
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ P+ YN+++ + G+ D++ ++ + M L P TFN ++ LCK +A
Sbjct: 212 GVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDA 271
Query: 121 LRMFRGLQKHGFV----PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 176
R+F ++ ++ P +TYN+++KG CK G L A+ + + + ++ + +Y
Sbjct: 272 SRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNI 331
Query: 177 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 236
++ R+ K+ +L M KG + Y ++ K+G L +A + M +G
Sbjct: 332 WLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNG 391
Query: 237 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 296
V D V+Y L++ YC GK++AA LL EM + + YT IL+ L K G I A
Sbjct: 392 VCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAE 451
Query: 297 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----------------- 339
L MN+ G+ + N IVD L G++D AI + + M V
Sbjct: 452 ELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLV 511
Query: 340 ----------KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 389
D TYS++++ LCKA R A L + ++ A + H
Sbjct: 512 DDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFI----H 567
Query: 390 SGCRREAKKIQSKIRMAK 407
C++ KI S R+ K
Sbjct: 568 HFCKQ--GKISSAFRVLK 583
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 200/439 (45%), Gaps = 31/439 (7%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D C+ TI+ M+ G+ PD VTY L+ G + + LL EM+
Sbjct: 366 ILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRN 425
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
P+ ++ N L+H L+++G+ EA + + M T T NI+++GLC + D A
Sbjct: 426 NCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKA 485
Query: 121 LRMFRGLQKHGF-----------------------VPELVTYNILIKGLCKAGRLRTARW 157
+ + +G++ HG +P+L+TY+ L+ GLCKAGR A+
Sbjct: 486 IEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKN 545
Query: 158 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 217
+ E+ P+++ Y + + K +L M++KG Y ++I
Sbjct: 546 LFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLG 605
Query: 218 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 277
++ E M++M G+ +I +YNT I C+ K+E A LLDEM ++ + +
Sbjct: 606 IKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVF 665
Query: 278 THTILIDGLCKAGNIKGARLHLEYMNKI-GFDSNLEAYNCIVDRLGKDGKIDHAINVFES 336
+ LI+ CK + A+ E I G L Y+ + + L G++ A + E+
Sbjct: 666 SFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL--YSLMFNELLAAGQLLKATELLEA 723
Query: 337 MEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 392
+ + +F Y +V +LCK L AS +L + G +A V+DGL G
Sbjct: 724 VLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGN 783
Query: 393 RREAKKIQSK-IRMAKISH 410
++EA K + MA +
Sbjct: 784 KKEANSFADKMMEMASVGE 802
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 200/466 (42%), Gaps = 101/466 (21%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ YC+ D G +LN M G+ P+ V YN++++ R S ++++M E
Sbjct: 187 ILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREE 246
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM----ICGDLTPCTATFNIMLNGLCKNRY 116
G+ PD+ ++NS + L + GK +A+R+F DM G P + T+N+ML G CK
Sbjct: 247 GLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGL 306
Query: 117 TDNALRMF-------------------RGLQKHG-FV---------------PELVTYNI 141
++A +F +GL +HG F+ P + +YNI
Sbjct: 307 LEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNI 366
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITY----------------TTIMKCCFRNR 185
L+ GLCK G L A+ I+ + +G P+A+TY ++++ RN
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426
Query: 186 --------------KYKLGL-----EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 226
+K+G E+L M KGY D ++ G L +A
Sbjct: 427 CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486
Query: 227 DYMEQMVTDGVQL-----------------------DIVSYNTLINLYCKEGKLEAAYLL 263
+ ++ M G D+++Y+TL+N CK G+ A L
Sbjct: 487 EIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNL 546
Query: 264 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 323
EM + + D + I I CK G I A L+ M K G +LE YN ++ LG
Sbjct: 547 FAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGI 606
Query: 324 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 365
+I + + M+ K + TY++ + LC+ +++ A+ LL
Sbjct: 607 KNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLL 652
Score = 135 bits (340), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 178/395 (45%), Gaps = 8/395 (2%)
Query: 19 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 78
L R R P V YN L+ + + L +M+ GI P +++N L+ L
Sbjct: 100 LVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCD 159
Query: 79 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 138
D A +F +M P TF I++ G CK TD L + ++ G +P V
Sbjct: 160 SSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVI 219
Query: 139 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 198
YN ++ C+ GR + +++++ + G P+ +T+ + + + K I S M+
Sbjct: 220 YNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME 279
Query: 199 RKGY----TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 254
Y + Y ++ F K+G L++A E + + + SYN + +
Sbjct: 280 LDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRH 339
Query: 255 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 314
GK A +L +M +G Y++ IL+DGLCK G + A+ + M + G + Y
Sbjct: 340 GKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTY 399
Query: 315 NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 370
C++ GK+D A ++ + M + +++T + ++H+L K R+ A +LL +
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNE 459
Query: 371 SGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 405
G + +VDGL SG +A +I +R+
Sbjct: 460 KGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRV 494
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 191/389 (49%), Gaps = 4/389 (1%)
Query: 20 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 79
+M GIS D+ ++ LI R S LS +L +L +M+++G P + ++ SL+H +
Sbjct: 95 QKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 80 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 139
+ +A + M+ P +N +++GLCKN + AL + ++K G ++VTY
Sbjct: 155 NRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214
Query: 140 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 199
N L+ GLC +GR A +L+++ P+ +T+T ++ + E+ M +
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 200 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 259
+ Y ++I GRL +A + M + G ++V+YNTLI+ +CK ++
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334
Query: 260 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 319
L M +GF D +T+ LI G C+ G ++ A +M ++ + ++
Sbjct: 335 GMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394
Query: 320 RLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 375
L +G+I+ A+ F+ M + + Y+ M+H LCKA ++ A +L GV+
Sbjct: 395 GLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKP 454
Query: 376 LKSAQKAVVDGLRHSGCRREAKKIQSKIR 404
++ GL +G RREA ++ +++
Sbjct: 455 DARTYTIMILGLCKNGPRREADELIRRMK 483
Score = 158 bits (400), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 192/400 (48%), Gaps = 8/400 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+LI +C+ ++L +M + G P +VT+ SL+ G + + + L+ M++
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G P+V YN+L+ L + G+ + A + +M L T+N +L GLC + +A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK- 179
RM R + K P++VT+ LI K G L A+ + KE+ S PN +TY +I+
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 180 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 239
C R Y + M KG + Y T+I+ F K + E ++M +G
Sbjct: 291 LCMHGRLYD-AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 240 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 299
DI +YNTLI+ YC+ GKL A + M + D TH IL+ GLC G I+ A +
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF 409
Query: 300 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 355
+ M + + AYN ++ L K K++ A +F + V+ D+ TY+ M+ LCK
Sbjct: 410 DDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN 469
Query: 356 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 395
A +L+ + G+ +A+ ++ HS +E
Sbjct: 470 GPRREADELIRRMKEEGIICQMNAEDDHLE--EHSSSNKE 507
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 4/258 (1%)
Query: 145 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 204
G + R A + E+ S P+ + +T ++ R+Y+ + M+ G +
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 205 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 264
D + + +I F + RL A + +M+ G + IV++ +L++ +C ++ A+ L+
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 265 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 324
M K G+E + + LIDGLCK G + A L M K G +++ YN ++ L
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 325 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 380
G+ A + M + D T+++++ K L A +L ++S V
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 381 KAVVDGLRHSGCRREAKK 398
++++GL G +AKK
Sbjct: 285 NSIINGLCMHGRLYDAKK 302
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 160 bits (405), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 194/411 (47%), Gaps = 10/411 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+D + F + + E+ P Y I A + S + L+L + M
Sbjct: 149 LLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHD 208
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
I P V+ YN L+ L + + ++A ++F +M+ L P T+N +++G CK + +
Sbjct: 209 RIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKS 268
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
++ ++ P L+T+N L+KGL KAG + A +LKE+ D G P+A T++ +
Sbjct: 269 FKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDG 328
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
N K + L + G + + ++ A K G++++A + + + + G+ +
Sbjct: 329 YSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPN 388
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
V YNT+I+ YC++G L A + ++ MEKQG + D + LI C+ G ++ A +
Sbjct: 389 EVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVN 448
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 356
M G ++E YN ++ G+ + D ++ + ME + + +Y ++++ LCK
Sbjct: 449 KMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGS 508
Query: 357 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 407
+L A + GV ++DG G KI+ R +K
Sbjct: 509 KLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKG------KIEDAFRFSK 553
Score = 145 bits (365), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 185/428 (43%), Gaps = 39/428 (9%)
Query: 3 IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 62
I A + G + NRM+ I P V YN LI G + ++ + L DEML +
Sbjct: 186 IQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRL 245
Query: 63 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 122
P + +YN+L+ + G P+++ +V + M + P TFN +L GL K ++A
Sbjct: 246 LPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAEN 305
Query: 123 MFRGLQKHGFVPELVTYNILIKG-----------------------------------LC 147
+ + ++ GFVP+ T++IL G LC
Sbjct: 306 VLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALC 365
Query: 148 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 207
K G++ A IL G PN + Y T++ R + AM+++G D
Sbjct: 366 KEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHL 425
Query: 208 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 267
Y +I F ++G ++ A + +M GV + +YN LI Y ++ + + + +L EM
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM 485
Query: 268 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 327
E G + ++ LI+ LCK + A++ M G + YN ++D GKI
Sbjct: 486 EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKI 545
Query: 328 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 383
+ A + M K + TY++++ L +L A LLL + G++ ++
Sbjct: 546 EDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSL 605
Query: 384 VDGLRHSG 391
+ G +G
Sbjct: 606 ISGYGFAG 613
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 154/319 (48%)
Query: 22 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 81
+R GI P + L+ + ++++ +LE P + Y + +L
Sbjct: 135 LRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSD 194
Query: 82 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 141
+ +F M + P +N++++GLCK + ++A ++F + +P L+TYN
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254
Query: 142 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 201
LI G CKAG + + + + P+ IT+ T++K F+ + +L MK G
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ D F + + + + + A E V GV+++ + + L+N CKEGK+E A
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
+L +G ++ + +IDG C+ G++ GAR+ +E M K G + AYNC++ R
Sbjct: 375 EILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF 434
Query: 322 GKDGKIDHAINVFESMEVK 340
+ G++++A M++K
Sbjct: 435 CELGEMENAEKEVNKMKLK 453
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 172/362 (47%), Gaps = 8/362 (2%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L++A C+ + IL R G+ P+ V YN++I G R L + ++ M +
Sbjct: 359 ILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQ 418
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G+ PD +YN L+ +LG+ + A + M ++P T+NI++ G + D
Sbjct: 419 GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 478
Query: 121 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 180
+ + ++ +G +P +V+Y LI LCK +L A+ + +++ D G +P Y ++
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538
Query: 181 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 240
C K + M +KG + Y T+I G+L EA D + ++ G++ D
Sbjct: 539 CCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598
Query: 241 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 300
+ +YN+LI+ Y G ++ L +EM++ G + T+ +LI LC +G L
Sbjct: 599 VFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTK---EGIELTER 654
Query: 301 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 356
++ +L YN ++ G ++ A N+ + M K D TY+S++ K
Sbjct: 655 LFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVG 714
Query: 357 RL 358
+L
Sbjct: 715 KL 716
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 178/402 (44%), Gaps = 38/402 (9%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LID YC+ + + + + RM+ I P ++T+N+L+ G + ++ + ++L EM ++G
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 62 IPPDVWSYNSL-----------------------------------MHCLFQLGKPDEAN 86
PD ++++ L ++ L + GK ++A
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374
Query: 87 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 146
+ + L P +N M++G C+ A ++K G P+ + YN LI+
Sbjct: 375 EILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF 434
Query: 147 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 206
C+ G + A + ++ G +P+ TY ++ R ++ +IL M+ G +
Sbjct: 435 CELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNV 494
Query: 207 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 266
Y T+I K +L EA M GV + YN LI+ C +GK+E A+ E
Sbjct: 495 VSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKE 554
Query: 267 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 326
M K+G E + T+ LIDGL G + A L +++ G ++ YN ++ G G
Sbjct: 555 MLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGN 614
Query: 327 IDHAINVFESME---VKDSFTYSSMVHNLCKAKRLPSASKLL 365
+ I ++E M+ +K + ++ +LC + + +L
Sbjct: 615 VQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLF 656
Score = 132 bits (331), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 167/367 (45%), Gaps = 31/367 (8%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI +C+ + +N+M+ G+SP V TYN LI G R D+L EM + G
Sbjct: 430 LIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 121
P+V SY +L++CL + K EA V +DM ++P +N++++G C ++A
Sbjct: 490 TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAF 549
Query: 122 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 181
R + + K G LVTYN LI GL G+L A +L E+ G P+ TY +++
Sbjct: 550 RFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGY 609
Query: 182 FRNRKYKLGLEILSAMKRKGY--------------TFDG-------FG----------YC 210
+ + + MKR G T +G FG Y
Sbjct: 610 GFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYN 669
Query: 211 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 270
V+ + G +++A + +QM+ + LD +YN+LI K GKL L+DEM +
Sbjct: 670 GVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAR 729
Query: 271 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 330
E + T+ I++ G C+ + A + M + GF ++ N +V L ++ + A
Sbjct: 730 EMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEA 789
Query: 331 INVFESM 337
V M
Sbjct: 790 EIVISEM 796
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 163/394 (41%), Gaps = 37/394 (9%)
Query: 31 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP--DVWSYNSL--MHCLFQLGKPDEAN 86
V + ++ + L S S D E PP V L + L Q + + A
Sbjct: 16 TVKFTDSVSACSCRRLFSASTDPEPESQPEQAPPTNPVTGDEKLRNLRVLLQQNRIETAR 75
Query: 87 RVFQDMICGDLTPCTAT----------------------FNIMLNGLCKNRYTDNALRMF 124
V ++ D TP + +++LN +++ A +F
Sbjct: 76 GVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLN---ESKMISEAADLF 132
Query: 125 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 184
L+ G P + +L+ L K + R + + +S P+ Y ++ +
Sbjct: 133 FALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKL 192
Query: 185 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 244
GLE+ + MK F Y +I K R+ +A ++M+ + +++Y
Sbjct: 193 SDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITY 252
Query: 245 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 304
NTLI+ YCK G E ++ + + M+ E T L+ GL KAG ++ A L+ M
Sbjct: 253 NTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKD 312
Query: 305 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVK-DSFTYSSMVHNLCKAKRLPS 360
+GF + ++ + D + K + A+ V+E+ VK +++T S +++ LCK ++
Sbjct: 313 LGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEK 372
Query: 361 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 394
A ++L + G+ + ++DG CR+
Sbjct: 373 AEEILGREMAKGLVPNEVIYNTMIDGY----CRK 402
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 186/364 (51%), Gaps = 9/364 (2%)
Query: 11 SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 70
++D ++ + M GI D+ +YN +I R S +L ++ +M++ G PDV + +
Sbjct: 84 NYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVS 143
Query: 71 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 130
SL++ Q + +A + M P +N +++G CK ++A+ +F +++
Sbjct: 144 SLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD 203
Query: 131 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 190
G + VTYN L+ GLC +GR A +++++ PN IT+T ++ + K+
Sbjct: 204 GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEA 263
Query: 191 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 250
+++ M R+ D F Y ++I GR+ EA ++ MVT G D+V+YNTLIN
Sbjct: 264 MKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLING 323
Query: 251 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 310
+CK +++ L EM ++G D T+ +I G +AG A+ E +++ N
Sbjct: 324 FCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ---EIFSRMDSRPN 380
Query: 311 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL- 365
+ Y+ ++ L + +++ A+ +FE+M+ D TY+ ++H +CK + A L
Sbjct: 381 IRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFR 440
Query: 366 -LSC 368
LSC
Sbjct: 441 SLSC 444
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 161/326 (49%), Gaps = 6/326 (1%)
Query: 83 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 142
+E +F MI P F+ +L+ + K++ D + +F ++ G +L +YNI+
Sbjct: 51 EEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110
Query: 143 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKG 201
I LC+ R A ++ ++ G+ P+ +T ++++ C NR + ++++S M+ G
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFD-AIDLVSKMEEMG 169
Query: 202 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 261
+ D Y T+I KIG + +A + ++M DGV+ D V+YN+L+ C G+ A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 262 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 321
L+ +M + + T T +ID K G A E M + D ++ YN +++ L
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 322 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 377
G++D A + + M K D TY+++++ CK+KR+ +KL + G+
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 378 SAQKAVVDGLRHSGCRREAKKIQSKI 403
++ G +G A++I S++
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRM 375
Score = 85.5 bits (210), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 2 LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 61
LI+ C D +L+ M G PDVVTYN+LI G ++ + L EM + G
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 62 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM---------------IC------------ 94
+ D +YN+++ FQ G+PD A +F M +C
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLF 404
Query: 95 -----GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 149
++ T+NI+++G+CK ++A +FR L G P++V+Y +I G C+
Sbjct: 405 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 464
Query: 150 GRLRTARWILKELGDSGHAP 169
+ + + +++ + G P
Sbjct: 465 RQWDKSDLLYRKMQEDGLLP 484
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 90/221 (40%), Gaps = 39/221 (17%)
Query: 222 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 281
L+E D +M+ IV ++ +++ K + L ME G D Y++ I
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 282 LIDGLCK------AGNIKGARLHLEY-----------------------------MNKIG 306
+I+ LC+ A ++ G + Y M ++G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 307 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 362
F ++ YN I+D K G ++ A+ +F+ ME D+ TY+S+V LC + R A+
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 363 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 403
+L+ + + AV+D G EA K+ ++
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/134 (20%), Positives = 52/134 (38%), Gaps = 35/134 (26%)
Query: 1 MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 60
+L+ C + + M+++ I D+ TYN +I G M ++
Sbjct: 386 ILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHG----------------MCKI 429
Query: 61 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 120
G D W +F+ + C L P ++ M++G C+ R D +
Sbjct: 430 GNVEDAWD-------------------LFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKS 470
Query: 121 LRMFRGLQKHGFVP 134
++R +Q+ G +P
Sbjct: 471 DLLYRKMQEDGLLP 484
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 147,952,571
Number of Sequences: 539616
Number of extensions: 6096977
Number of successful extensions: 29518
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 19290
Number of HSP's gapped (non-prelim): 3215
length of query: 410
length of database: 191,569,459
effective HSP length: 120
effective length of query: 290
effective length of database: 126,815,539
effective search space: 36776506310
effective search space used: 36776506310
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 62 (28.5 bits)