BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015247
(410 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 142/306 (46%), Positives = 188/306 (61%), Gaps = 24/306 (7%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDHPN 176
+EK+ KIGQGT+ V+KA+ TG+ VALKKV +N E E A REI IL+ L H N
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN-EKEGFPITALREIKILQLLKHEN 78
Query: 177 VIKLEGLVTSRMS------CSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGL 230
V+ L + ++ S S+YLVF + EHDLAGL ++ VKFT ++K M LL+GL
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 231 EHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF------DPNHKHPMTSRVVTLWY 284
+ H N +LHRD+K +N+LI DGVLK+ADFGLA F PN +RVVTLWY
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR---YXNRVVTLWY 195
Query: 285 RPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344
RPPELLLG DYG +DLW AGCI+AE+ PIM G TE QL I +LCGS + E W
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW- 254
Query: 345 KSKLPNATLFKPRE---PYKRCIQETFKDF--PPSSLPLIETLLAIDPAERLTATVALNS 399
+ N L++ E KR +++ K + P +L LI+ LL +DPA+R+ + ALN
Sbjct: 255 -PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 313
Query: 400 EVIFQD 405
+ + D
Sbjct: 314 DFFWSD 319
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 143/306 (46%), Positives = 189/306 (61%), Gaps = 24/306 (7%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDHPN 176
+EK+ KIGQGT+ V+KA+ TG+ VALKKV +N E E A REI IL+ L H N
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN-EKEGFPITALREIKILQLLKHEN 78
Query: 177 VIKLEGLVTSRMS----C--SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGL 230
V+ L + ++ S C S+YLVF + EHDLAGL ++ VKFT ++K M LL+GL
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 231 EHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF------DPNHKHPMTSRVVTLWY 284
+ H N +LHRD+K +N+LI DGVLK+ADFGLA F PN +RVVTLWY
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR---YXNRVVTLWY 195
Query: 285 RPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344
RPPELLLG DYG +DLW AGCI+AE+ PIM G TE QL I +LCGS + E W
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW- 254
Query: 345 KSKLPNATLFKPRE---PYKRCIQETFKDF--PPSSLPLIETLLAIDPAERLTATVALNS 399
+ N L++ E KR +++ K + P +L LI+ LL +DPA+R+ + ALN
Sbjct: 255 -PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 313
Query: 400 EVIFQD 405
+ + D
Sbjct: 314 DFFWSD 319
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 238 bits (608), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 143/306 (46%), Positives = 189/306 (61%), Gaps = 24/306 (7%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDHPN 176
+EK+ KIGQGT+ V+KA+ TG+ VALKKV +N E E A REI IL+ L H N
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN-EKEGFPITALREIKILQLLKHEN 78
Query: 177 VIKLEGLVTSRMS----C--SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGL 230
V+ L + ++ S C S+YLVF + EHDLAGL ++ VKFT ++K M LL+GL
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 231 EHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF------DPNHKHPMTSRVVTLWY 284
+ H N +LHRD+K +N+LI DGVLK+ADFGLA F PN +RVVTLWY
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR---YXNRVVTLWY 195
Query: 285 RPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344
RPPELLLG DYG +DLW AGCI+AE+ PIM G TE QL I +LCGS + E W
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW- 254
Query: 345 KSKLPNATLFKPRE---PYKRCIQETFKDF--PPSSLPLIETLLAIDPAERLTATVALNS 399
+ N L++ E KR +++ K + P +L LI+ LL +DPA+R+ + ALN
Sbjct: 255 -PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 313
Query: 400 EVIFQD 405
+ + D
Sbjct: 314 DFFWSD 319
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 238 bits (607), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 143/306 (46%), Positives = 189/306 (61%), Gaps = 24/306 (7%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDHPN 176
+EK+ KIGQGT+ V+KA+ TG+ VALKKV +N E E A REI IL+ L H N
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN-EKEGFPITALREIKILQLLKHEN 77
Query: 177 VIKLEGLVTSRMS----C--SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGL 230
V+ L + ++ S C S+YLVF + EHDLAGL ++ VKFT ++K M LL+GL
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 137
Query: 231 EHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF------DPNHKHPMTSRVVTLWY 284
+ H N +LHRD+K +N+LI DGVLK+ADFGLA F PN +RVVTLWY
Sbjct: 138 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR---YXNRVVTLWY 194
Query: 285 RPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344
RPPELLLG DYG +DLW AGCI+AE+ PIM G TE QL I +LCGS + E W
Sbjct: 195 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW- 253
Query: 345 KSKLPNATLFKPRE---PYKRCIQETFKDF--PPSSLPLIETLLAIDPAERLTATVALNS 399
+ N L++ E KR +++ K + P +L LI+ LL +DPA+R+ + ALN
Sbjct: 254 -PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312
Query: 400 EVIFQD 405
+ + D
Sbjct: 313 DFFWSD 318
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/303 (42%), Positives = 186/303 (61%), Gaps = 17/303 (5%)
Query: 112 PRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILR 170
P ++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+
Sbjct: 6 PEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLK 64
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSG 229
L+HPN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL G
Sbjct: 65 ELNHPNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 122
Query: 230 LEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPE 288
L CH++ VLHRD+K NLLI+ +G +K+ADFGLA F P + T VVTLWYR PE
Sbjct: 123 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPE 180
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SK 347
+LLG Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W +
Sbjct: 181 ILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 240
Query: 348 LPNATLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQ 404
+P+ +KP P K Q+ K PP L+ +L DP +R++A AL + FQ
Sbjct: 241 MPD---YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQ 295
Query: 405 DRT 407
D T
Sbjct: 296 DVT 298
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 222 bits (565), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 130/303 (42%), Positives = 186/303 (61%), Gaps = 17/303 (5%)
Query: 112 PRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILR 170
P ++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+
Sbjct: 6 PEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLK 64
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSG 229
L+HPN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL G
Sbjct: 65 ELNHPNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 122
Query: 230 LEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPE 288
L CH++ VLHRD+K NLLI+ +G +K+ADFGLA F P + T VVTLWYR PE
Sbjct: 123 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPE 180
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SK 347
+LLG Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W +
Sbjct: 181 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 240
Query: 348 LPNATLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQ 404
+P+ +KP P K Q+ K PP L+ +L DP +R++A AL + FQ
Sbjct: 241 MPD---YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQ 295
Query: 405 DRT 407
D T
Sbjct: 296 DVT 298
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 221 bits (563), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 129/299 (43%), Positives = 185/299 (61%), Gaps = 17/299 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+ L+H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 62
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 63 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + T VVTLWYR PE+LLG
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 178
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 237
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD T
Sbjct: 238 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQDVT 292
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 221 bits (563), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 129/299 (43%), Positives = 185/299 (61%), Gaps = 17/299 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+ L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 62 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + T VVTLWYR PE+LLG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 177
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 236
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD T
Sbjct: 237 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQDVT 291
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 221 bits (563), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 129/299 (43%), Positives = 185/299 (61%), Gaps = 17/299 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+ L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 62 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + T VVTLWYR PE+LLG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 177
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 236
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD T
Sbjct: 237 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQDVT 291
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 221 bits (562), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 129/299 (43%), Positives = 185/299 (61%), Gaps = 17/299 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+ L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 62 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + T VVTLWYR PE+LLG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 177
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 236
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD T
Sbjct: 237 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQDVT 291
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 221 bits (562), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 129/299 (43%), Positives = 185/299 (61%), Gaps = 17/299 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+ L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 61 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + T VVTLWYR PE+LLG
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 176
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 235
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD T
Sbjct: 236 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQDVT 290
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 221 bits (562), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 129/299 (43%), Positives = 185/299 (61%), Gaps = 17/299 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+ L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 62 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + T VVTLWYR PE+LLG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 177
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 236
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD T
Sbjct: 237 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQDVT 291
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 221 bits (562), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 129/299 (43%), Positives = 185/299 (61%), Gaps = 17/299 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+ L+H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 65
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 66 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + T VVTLWYR PE+LLG
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 181
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 240
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD T
Sbjct: 241 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQDVT 295
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 221 bits (562), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 129/299 (43%), Positives = 185/299 (61%), Gaps = 17/299 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+ L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 61 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + T VVTLWYR PE+LLG
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 176
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 235
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD T
Sbjct: 236 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQDVT 290
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 129/303 (42%), Positives = 185/303 (61%), Gaps = 17/303 (5%)
Query: 112 PRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILR 170
P ++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLK 60
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSG 229
L+HPN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL G
Sbjct: 61 ELNHPNIVKLLDVIHT--ENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 230 LEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPE 288
L CH++ VLHRD+K NLLI+ +G +K+ADFGLA F P + VVTLWYR PE
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPE 176
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SK 347
+LLG Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 236
Query: 348 LPNATLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQ 404
+P+ +KP P K Q+ K PP L+ +L DP +R++A AL + FQ
Sbjct: 237 MPD---YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQ 291
Query: 405 DRT 407
D T
Sbjct: 292 DVT 294
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 129/299 (43%), Positives = 185/299 (61%), Gaps = 17/299 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+ L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 61 PNIVKLLDVIHT--ENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + T VVTLWYR PE+LLG
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 176
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 235
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD T
Sbjct: 236 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQDVT 290
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 129/303 (42%), Positives = 185/303 (61%), Gaps = 17/303 (5%)
Query: 112 PRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILR 170
P ++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLK 59
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSG 229
L+HPN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL G
Sbjct: 60 ELNHPNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 230 LEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPE 288
L CH++ VLHRD+K NLLI+ +G +K+ADFGLA F P + VVTLWYR PE
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPE 175
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SK 347
+LLG Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 235
Query: 348 LPNATLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQ 404
+P+ +KP P K Q+ K PP L+ +L DP +R++A AL + FQ
Sbjct: 236 MPD---YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQ 290
Query: 405 DRT 407
D T
Sbjct: 291 DVT 293
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/303 (42%), Positives = 185/303 (61%), Gaps = 17/303 (5%)
Query: 112 PRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILR 170
P ++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLK 60
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSG 229
L+HPN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL G
Sbjct: 61 ELNHPNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 230 LEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPE 288
L CH++ VLHRD+K NLLI+ +G +K+ADFGLA F P + VVTLWYR PE
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPE 176
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SK 347
+LLG Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 236
Query: 348 LPNATLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQ 404
+P+ +KP P K Q+ K PP L+ +L DP +R++A AL + FQ
Sbjct: 237 MPD---YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQ 291
Query: 405 DRT 407
D T
Sbjct: 292 DVT 294
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/303 (42%), Positives = 185/303 (61%), Gaps = 17/303 (5%)
Query: 112 PRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILR 170
P ++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLK 59
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSG 229
L+HPN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL G
Sbjct: 60 ELNHPNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 230 LEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPE 288
L CH++ VLHRD+K NLLI+ +G +K+ADFGLA F P + VVTLWYR PE
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPE 175
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SK 347
+LLG Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 235
Query: 348 LPNATLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQ 404
+P+ +KP P K Q+ K PP L+ +L DP +R++A AL + FQ
Sbjct: 236 MPD---YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQ 290
Query: 405 DRT 407
D T
Sbjct: 291 DVT 293
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/303 (42%), Positives = 185/303 (61%), Gaps = 17/303 (5%)
Query: 112 PRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILR 170
P ++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLK 59
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSG 229
L+HPN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL G
Sbjct: 60 ELNHPNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 230 LEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPE 288
L CH++ VLHRD+K NLLI+ +G +K+ADFGLA F P + VVTLWYR PE
Sbjct: 118 LAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPE 175
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SK 347
+LLG Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 235
Query: 348 LPNATLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQ 404
+P+ +KP P K Q+ K PP L+ +L DP +R++A AL + FQ
Sbjct: 236 MPD---YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQ 290
Query: 405 DRT 407
D T
Sbjct: 291 DVT 293
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/303 (42%), Positives = 186/303 (61%), Gaps = 17/303 (5%)
Query: 112 PRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILR 170
P ++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLK 60
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSG 229
L+HPN++KL ++ + LYLVF +++ DL + AS P +K Y+ QLL G
Sbjct: 61 ELNHPNIVKLLDVIHT--ENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 230 LEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPE 288
L CH++ VLHRD+K NLLI+ +G +K+ADFGLA F P + VVTLWYR PE
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPE 176
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SK 347
+LLG Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 236
Query: 348 LPNATLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQ 404
+P+ +KP P K Q+ K PP L+ +L DP +R++A AL + FQ
Sbjct: 237 MPD---YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQ 291
Query: 405 DRT 407
D T
Sbjct: 292 DVT 294
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VAL K+R D E E V A REI +L+ L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 62 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + T VVTLWYR PE+LLG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 177
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 236
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD T
Sbjct: 237 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQDVT 291
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VAL K+R D E E V A REI +L+ L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 61 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + T VVTLWYR PE+LLG
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 176
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 235
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD T
Sbjct: 236 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQDVT 290
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+ L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 62 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + VVTLWYR PE+LLG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 177
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 236
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD T
Sbjct: 237 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQDVT 291
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+ L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 62 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + VVTLWYR PE+LLG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 177
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 236
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD T
Sbjct: 237 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQDVT 291
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+ L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 62 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + VVTLWYR PE+LLG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 177
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 236
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD T
Sbjct: 237 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQDVT 291
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+ L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 61 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + VVTLWYR PE+LLG
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 176
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 235
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD T
Sbjct: 236 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQDVT 290
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+ L+H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 65
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 66 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + VVTLWYR PE+LLG
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 181
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 240
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD T
Sbjct: 241 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQDVT 295
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+ L+H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 62
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 63 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + VVTLWYR PE+LLG
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 178
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 237
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD T
Sbjct: 238 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQDVT 292
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+ L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 62 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + VVTLWYR PE+LLG
Sbjct: 120 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 177
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 236
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD T
Sbjct: 237 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQDVT 291
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+ L+H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 62
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 63 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + VVTLWYR PE+LLG
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 178
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 237
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD T
Sbjct: 238 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQDVT 292
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 218 bits (556), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+ L+H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 64
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 65 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + VVTLWYR PE+LLG
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 180
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 239
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD T
Sbjct: 240 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQDVT 294
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 218 bits (556), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+ L+H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 62
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 63 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + VVTLWYR PE+LLG
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 178
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 237
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD T
Sbjct: 238 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQDVT 292
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 218 bits (556), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+ L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 61 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + VVTLWYR PE+LLG
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 176
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 235
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD T
Sbjct: 236 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQDVT 290
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 218 bits (555), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+ L+H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 64
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 65 PNIVKLLDVIHT--ENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + VVTLWYR PE+LLG
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 180
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 239
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD T
Sbjct: 240 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQDVT 294
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 218 bits (555), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 127/297 (42%), Positives = 183/297 (61%), Gaps = 17/297 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+ L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 62 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + VVTLWYR PE+LLG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 177
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 236
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQD 405
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD
Sbjct: 237 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQD 289
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 218 bits (555), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+ L+H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 63
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 64 PNIVKLLDVIHT--ENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + VVTLWYR PE+LLG
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 179
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 238
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD T
Sbjct: 239 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQDVT 293
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 218 bits (555), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+ L+H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 62
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 63 PNIVKLLDVIHT--ENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + VVTLWYR PE+LLG
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 178
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 237
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD T
Sbjct: 238 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQDVT 292
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 218 bits (555), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
++F+K++KIG+GTY VYKA++ LTG++VALKK+R D E E V A REI +L+ L+H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 64
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL ++ + LYLVF ++ DL + AS P +K Y+ QLL GL C
Sbjct: 65 PNIVKLLDVIHT--ENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLG 292
H++ VLHRD+K NLLI+ +G +K+ADFGLA F P + VVTLWYR PE+LLG
Sbjct: 123 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 180
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNA 351
Y VD+WS GCI AE++ + + PG +E++QL +I++ G+P E W + +P+
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 239
Query: 352 TLFKPREPYKRCIQETFKDFPP---SSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
+KP P K Q+ K PP L+ +L DP +R++A AL + FQD T
Sbjct: 240 --YKPSFP-KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL-AHPFFQDVT 294
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/294 (42%), Positives = 176/294 (59%), Gaps = 15/294 (5%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE--PESVKFMA-REIL 167
+ RA +EK+D +G+G ++ VYKA+D T +IVA+KK++ + + + A REI
Sbjct: 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK 64
Query: 168 ILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLL 227
+L+ L HPN+I L + + SL VF +ME DL + + T +K YM L
Sbjct: 65 LLQELSHPNIIGLLDAFGHKSNISL--VFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTL 122
Query: 228 SGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHKHPMTSRVVTLWYRP 286
GLE+ H + +LHRD+K +NLL+D++GVLK+ADFGLA SF PN + +VVT WYR
Sbjct: 123 QGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY--XHQVVTRWYRA 180
Query: 287 PELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYW-KK 345
PELL GA YGVGVD+W+ GCILAELL P +PG ++++QL +I++ G+P+EE W
Sbjct: 181 PELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM 240
Query: 346 SKLPNATLFK--PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
LP+ FK P P D L LI+ L +P R+TAT AL
Sbjct: 241 CSLPDYVTFKSFPGIPLHHIFSAAGDDL----LDLIQGLFLFNPCARITATQAL 290
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/289 (42%), Positives = 178/289 (61%), Gaps = 15/289 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
+ ++K++K+G+GTY VYKAKD G+IVALK++R D E E + A REI +L+ L H
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDA-EDEGIPSTAIREISLLKELHH 78
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN++ L ++ S C L LVF +ME DL + + + Q+K Y++QLL G+ HCH
Sbjct: 79 PNIVSLIDVIHSE-RC-LTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLGA 293
+ +LHRD+K NLLI+ DG LK+ADFGLA F P + T VVTLWYR P++L+G+
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGS 194
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNAT 352
Y VD+WS GCI AE++ GKP+ PG T+ +QL KI+ + G+P+ W + +LP
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP--- 251
Query: 353 LFKPREPY---KRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398
L+K R K+ F + L+ +L DP +R++A A+N
Sbjct: 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/289 (42%), Positives = 178/289 (61%), Gaps = 15/289 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILILRRLDH 174
+ ++K++K+G+GTY VYKAKD G+IVALK++R D E E + A REI +L+ L H
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDA-EDEGIPSTAIREISLLKELHH 78
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN++ L ++ S C L LVF +ME DL + + + Q+K Y++QLL G+ HCH
Sbjct: 79 PNIVSLIDVIHSE-RC-LTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLGA 293
+ +LHRD+K NLLI+ DG LK+ADFGLA F P + T VVTLWYR P++L+G+
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGS 194
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKLPNAT 352
Y VD+WS GCI AE++ GKP+ PG T+ +QL KI+ + G+P+ W + +LP
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP--- 251
Query: 353 LFKPREPY---KRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398
L+K R K+ F + L+ +L DP +R++A A+N
Sbjct: 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 115/283 (40%), Positives = 168/283 (59%), Gaps = 6/283 (2%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
+EK++KIG+GTY V+KAK+ T +IVALK+VR D+ + REI +L+ L H N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 178 IKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNG 237
++L ++ S L LVF + + DL S VK ++ QLL GL CH+
Sbjct: 64 VRLHDVLHSDK--KLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 238 VLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYG 297
VLHRD+K NLLI+ +G LK+A+FGLA F + ++ VVTLWYRPP++L GA Y
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC-YSAEVVTLWYRPPDVLFGAKLYS 180
Query: 298 VGVDLWSAGCILAELL-AGKPIMPGRTEVEQLHKIYKLCGSPSEEYW-KKSKLPNATLFK 355
+D+WSAGCI AEL AG+P+ PG +QL +I++L G+P+EE W +KLP+ +
Sbjct: 181 TSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY- 239
Query: 356 PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398
P P + + L++ LL +P +R++A AL
Sbjct: 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 115/283 (40%), Positives = 167/283 (59%), Gaps = 6/283 (2%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
+EK++KIG+GTY V+KAK+ T +IVALK+VR D+ + REI +L+ L H N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 178 IKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNG 237
++L ++ S L LVF + + DL S VK ++ QLL GL CH+
Sbjct: 64 VRLHDVLHSDK--KLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 238 VLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYG 297
VLHRD+K NLLI+ +G LK+ADFGLA F + ++ VVTLWYRPP++L GA Y
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRC-YSAEVVTLWYRPPDVLFGAKLYS 180
Query: 298 VGVDLWSAGCILAELL-AGKPIMPGRTEVEQLHKIYKLCGSPSEEYW-KKSKLPNATLFK 355
+D+WSAGCI AEL A +P+ PG +QL +I++L G+P+EE W +KLP+ +
Sbjct: 181 TSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY- 239
Query: 356 PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398
P P + + L++ LL +P +R++A AL
Sbjct: 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 171/288 (59%), Gaps = 16/288 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
+ + ++KIG+GTY VYKA++ G+ ALKK+R + + REI IL+ L H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
N++KL ++ ++ L LVF +++ DL L E K ++ QLL+G+ +CH+
Sbjct: 61 NIVKLYDVIHTKKR--LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLGAT 294
VLHRD+K NLLI+ +G LKIADFGLA F P K+ T VVTLWYR P++L+G+
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDVLMGSK 176
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354
Y +D+WS GCI AE++ G P+ PG +E +QL +I+++ G+P+ + W PN T
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNW-----PNVTEL 231
Query: 355 KPREP----YKRCIQETF-KDFPPSSLPLIETLLAIDPAERLTATVAL 397
+P Y+ E+F K S + L+ +L +DP +R+TA AL
Sbjct: 232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 171/288 (59%), Gaps = 16/288 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
+ + ++KIG+GTY VYKA++ G+ ALKK+R + + REI IL+ L H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
N++KL ++ ++ L LVF +++ DL L E K ++ QLL+G+ +CH+
Sbjct: 61 NIVKLYDVIHTKKR--LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLGAT 294
VLHRD+K NLLI+ +G LKIADFGLA F P K+ T VVTLWYR P++L+G+
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDVLMGSK 176
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354
Y +D+WS GCI AE++ G P+ PG +E +QL +I+++ G+P+ + W PN T
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNW-----PNVTEL 231
Query: 355 KPREP----YKRCIQETF-KDFPPSSLPLIETLLAIDPAERLTATVAL 397
+P Y+ E+F K S + L+ +L +DP +R+TA AL
Sbjct: 232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 171/288 (59%), Gaps = 16/288 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
+ + ++KIG+GTY VYKA++ G+ ALKK+R + + REI IL+ L H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
N++KL ++ ++ L LVF +++ DL L E K ++ QLL+G+ +CH+
Sbjct: 61 NIVKLYDVIHTKKR--LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLGAT 294
VLHRD+K NLLI+ +G LKIADFGLA F P K+ T +VTLWYR P++L+G+
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEIVTLWYRAPDVLMGSK 176
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354
Y +D+WS GCI AE++ G P+ PG +E +QL +I+++ G+P+ + W PN T
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNW-----PNVTEL 231
Query: 355 KPREP----YKRCIQETF-KDFPPSSLPLIETLLAIDPAERLTATVAL 397
+P Y+ E+F K S + L+ +L +DP +R+TA AL
Sbjct: 232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 99/228 (43%), Positives = 143/228 (62%), Gaps = 4/228 (1%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
+++ K+DK+G+GTY+ VYK K LT +VALK++R ++ E + RE+ +L+ L H
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAI-REVSLLKDLKHA 60
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
N++ L ++ + S L LVF Y++ DL VK ++ QLL GL +CH
Sbjct: 61 NIVTLHDIIHTEKS--LTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR 118
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATD 295
VLHRD+K NLLI++ G LK+ADFGLA K + VVTLWYRPP++LLG+TD
Sbjct: 119 QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-TYDNEVVTLWYRPPDILLGSTD 177
Query: 296 YGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYW 343
Y +D+W GCI E+ G+P+ PG T EQLH I+++ G+P+EE W
Sbjct: 178 YSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETW 225
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 191 bits (485), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 113/295 (38%), Positives = 170/295 (57%), Gaps = 16/295 (5%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH 174
+ F++++K+G GTY+ VYK + TG VALK+V+ D+ E + REI +++ L H
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS-EEGTPSTAIREISLMKELKH 62
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQ------VKCYMHQLLS 228
N+++L ++ + L LVF +M++DL S V T P+ VK + QLL
Sbjct: 63 ENIVRLYDVIHTE--NKLTLVFEFMDNDLKKYMDSRTVGNT-PRGLELNLVKYFQWQLLQ 119
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
GL CH N +LHRD+K NLLI+ G LK+ DFGLA F + +S VVTLWYR P+
Sbjct: 120 GLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP-VNTFSSEVVTLWYRAPD 178
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SK 347
+L+G+ Y +D+WS GCILAE++ GKP+ PG + EQL I+ + G+P+E W +K
Sbjct: 179 VLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTK 238
Query: 348 L----PNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398
L PN PR+ + T + + + + LL ++P RL+A AL+
Sbjct: 239 LPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 164/296 (55%), Gaps = 14/296 (4%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD---H 174
+E + +IG G Y VYKA+D +G VALK VR N E RE+ +LRRL+ H
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 175 PNVIKLEGL-VTSRMS--CSLYLVFHYMEHDL-AGLAASPEVKFTEPQVKCYMHQLLSGL 230
PNV++L + TSR + LVF +++ DL L +P +K M Q L GL
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 231 EHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELL 290
+ H N ++HRD+K N+L+ G +K+ADFGLA + +++ + VVTLWYR PE+L
Sbjct: 126 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALAPVVVTLWYRAPEVL 183
Query: 291 LGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS-KLP 349
L +T Y VD+WS GCI AE+ KP+ G +E +QL KI+ L G P E+ W + LP
Sbjct: 184 LQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP 242
Query: 350 NATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIFQD 405
F PR P R +Q + S L+ +L +P +R++A AL + +D
Sbjct: 243 RGA-FPPRGP--RPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD 295
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 164/296 (55%), Gaps = 14/296 (4%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD---H 174
+E + +IG G Y VYKA+D +G VALK VR N E RE+ +LRRL+ H
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 175 PNVIKLEGL-VTSRMS--CSLYLVFHYMEHDL-AGLAASPEVKFTEPQVKCYMHQLLSGL 230
PNV++L + TSR + LVF +++ DL L +P +K M Q L GL
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 231 EHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELL 290
+ H N ++HRD+K N+L+ G +K+ADFGLA + +++ + VVTLWYR PE+L
Sbjct: 126 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALDPVVVTLWYRAPEVL 183
Query: 291 LGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS-KLP 349
L +T Y VD+WS GCI AE+ KP+ G +E +QL KI+ L G P E+ W + LP
Sbjct: 184 LQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP 242
Query: 350 NATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIFQD 405
F PR P R +Q + S L+ +L +P +R++A AL + +D
Sbjct: 243 RGA-FPPRGP--RPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD 295
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 164/299 (54%), Gaps = 17/299 (5%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF---MAREILILRRLD- 173
+E + +IG G Y VYKA+D +G VALK VR N RE+ +LRRL+
Sbjct: 11 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEA 70
Query: 174 --HPNVIKLEGL-VTSRMS--CSLYLVFHYMEHDL-AGLAASPEVKFTEPQVKCYMHQLL 227
HPNV++L + TSR + LVF +++ DL L +P +K M Q L
Sbjct: 71 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 130
Query: 228 SGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
GL+ H N ++HRD+K N+L+ G +K+ADFGLA + +++ +T VVTLWYR P
Sbjct: 131 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALTPVVVTLWYRAP 188
Query: 288 ELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS- 346
E+LL +T Y VD+WS GCI AE+ KP+ G +E +QL KI+ L G P E+ W +
Sbjct: 189 EVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV 247
Query: 347 KLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIFQD 405
LP F PR P R +Q + S L+ +L +P +R++A AL + +D
Sbjct: 248 SLPRGA-FPPRGP--RPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD 303
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 164/296 (55%), Gaps = 14/296 (4%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD---H 174
+E + +IG G Y VYKA+D +G VALK VR N E RE+ +LRRL+ H
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 175 PNVIKLEGL-VTSRMS--CSLYLVFHYMEHDL-AGLAASPEVKFTEPQVKCYMHQLLSGL 230
PNV++L + TSR + LVF +++ DL L +P +K M Q L GL
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 231 EHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELL 290
+ H N ++HRD+K N+L+ G +K+ADFGLA + +++ + VVTLWYR PE+L
Sbjct: 126 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALFPVVVTLWYRAPEVL 183
Query: 291 LGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS-KLP 349
L +T Y VD+WS GCI AE+ KP+ G +E +QL KI+ L G P E+ W + LP
Sbjct: 184 LQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP 242
Query: 350 NATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIFQD 405
F PR P R +Q + S L+ +L +P +R++A AL + +D
Sbjct: 243 RGA-FPPRGP--RPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD 295
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 181 bits (460), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 167/289 (57%), Gaps = 12/289 (4%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D + +I K+G+GTY VYKA D +T + VA+K++R ++ E RE+ +L+ L H
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
N+I+L+ ++ + L+L+F Y E+DL + +P+V +K +++QL++G+ CH
Sbjct: 94 NIIELKSVI--HHNHRLHLIFEYAENDLKKYMDKNPDVSMR--VIKSFLYQLINGVNFCH 149
Query: 235 NNGVLHRDIKGSNLLID-----DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPEL 289
+ LHRD+K NLL+ + VLKI DFGLA F + T ++TLWYRPPE+
Sbjct: 150 SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQ-FTHEIITLWYRPPEI 208
Query: 290 LLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-SKL 348
LLG+ Y VD+WS CI AE+L P+ PG +E++QL KI+++ G P + W + L
Sbjct: 209 LLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTAL 268
Query: 349 PNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
P+ P+ K + L L+ +L +DP +R++A AL
Sbjct: 269 PDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNAL 317
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 181 bits (460), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 121/310 (39%), Positives = 171/310 (55%), Gaps = 25/310 (8%)
Query: 114 RADS-FEKIDKIGQGTYSNVYKAKDMLT-GKIVALKKVRFDNLEPESVKFMAREILILRR 171
RAD +E + +IG+G Y V+KA+D+ G+ VALK+VR E RE+ +LR
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 172 L---DHPNVIKLEGLVT---SRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMH 224
L +HPNV++L + T + L LVF +++ DL L PE +K M
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 225 QLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWY 284
QLL GL+ H++ V+HRD+K N+L+ G +K+ADFGLA + + + +TS VVTLWY
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLWY 185
Query: 285 RPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344
R PE+LL ++ Y VDLWS GCI AE+ KP+ G ++V+QL KI + G P EE W
Sbjct: 186 RAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244
Query: 345 KS-KLPNATLF----KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399
+ LP +P E + I E KD L+ L +PA+R++A AL S
Sbjct: 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKD-------LLLKCLTFNPAKRISAYSAL-S 296
Query: 400 EVIFQDRTLC 409
FQD C
Sbjct: 297 HPYFQDLERC 306
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 121/310 (39%), Positives = 171/310 (55%), Gaps = 25/310 (8%)
Query: 114 RADS-FEKIDKIGQGTYSNVYKAKDMLT-GKIVALKKVRFDNLEPESVKFMAREILILRR 171
RAD +E + +IG+G Y V+KA+D+ G+ VALK+VR E RE+ +LR
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 172 L---DHPNVIKLEGLVT---SRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMH 224
L +HPNV++L + T + L LVF +++ DL L PE +K M
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 225 QLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWY 284
QLL GL+ H++ V+HRD+K N+L+ G +K+ADFGLA + + + +TS VVTLWY
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLWY 185
Query: 285 RPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344
R PE+LL ++ Y VDLWS GCI AE+ KP+ G ++V+QL KI + G P EE W
Sbjct: 186 RAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244
Query: 345 KS-KLPNATLF----KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNS 399
+ LP +P E + I E KD L+ L +PA+R++A AL S
Sbjct: 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKD-------LLLKCLTFNPAKRISAYSAL-S 296
Query: 400 EVIFQDRTLC 409
FQD C
Sbjct: 297 HPYFQDLERC 306
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 167/299 (55%), Gaps = 24/299 (8%)
Query: 114 RADS-FEKIDKIGQGTYSNVYKAKDMLT-GKIVALKKVRFDNLEPESVKFMAREILILRR 171
RAD +E + +IG+G Y V+KA+D+ G+ VALK+VR E RE+ +LR
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 172 L---DHPNVIKLEGLVT---SRMSCSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMH 224
L +HPNV++L + T + L LVF +++ DL L PE +K M
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 225 QLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWY 284
QLL GL+ H++ V+HRD+K N+L+ G +K+ADFGLA + + + +TS VVTLWY
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLWY 185
Query: 285 RPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344
R PE+LL ++ Y VDLWS GCI AE+ KP+ G ++V+QL KI + G P EE W
Sbjct: 186 RAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244
Query: 345 KS-KLPNATLF----KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398
+ LP +P E + I E KD L+ L +PA+R++A AL+
Sbjct: 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKD-------LLLKCLTFNPAKRISAYSALS 296
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 157/285 (55%), Gaps = 18/285 (6%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
S+ IG G++ VY+AK +G++VA+KKV D +F RE+ I+R+LDH N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 108
Query: 177 VIKLEGLVTS----RMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEP--QVKCYMHQLLSG 229
+++L S + L LV Y+ + +A K T P VK YM+QL
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 230 LEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
L + H+ G+ HRDIK NLL+D D VLK+ DFG A P S + + +YR PE
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAPE 226
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348
L+ GATDY +D+WSAGC+LAELL G+PI PG + V+QL +I K+ G+P+ E ++
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 285
Query: 349 PNATLFKPREPYKRCIQETFKD-FPPSSLPLIETLLAIDPAERLT 392
PN T FK + + F+ PP ++ L LL P RLT
Sbjct: 286 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 330
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 157/285 (55%), Gaps = 18/285 (6%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
S+ IG G++ VY+AK +G++VA+KKV D +F RE+ I+R+LDH N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 108
Query: 177 VIKLEGLVTS----RMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEP--QVKCYMHQLLSG 229
+++L S + L LV Y+ + +A K T P VK YM+QL
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 230 LEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
L + H+ G+ HRDIK NLL+D D VLK+ DFG A P S + + +YR PE
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAPE 226
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348
L+ GATDY +D+WSAGC+LAELL G+PI PG + V+QL +I K+ G+P+ E ++
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 285
Query: 349 PNATLFKPREPYKRCIQETFKD-FPPSSLPLIETLLAIDPAERLT 392
PN T FK + + F+ PP ++ L LL P RLT
Sbjct: 286 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 330
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 157/285 (55%), Gaps = 18/285 (6%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
S+ IG G++ VY+AK +G++VA+KKV D +F RE+ I+R+LDH N
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 102
Query: 177 VIKLEGLVTS----RMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEP--QVKCYMHQLLSG 229
+++L S + L LV Y+ + +A K T P VK YM+QL
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 162
Query: 230 LEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
L + H+ G+ HRDIK NLL+D D VLK+ DFG A P S + + +YR PE
Sbjct: 163 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAPE 220
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348
L+ GATDY +D+WSAGC+LAELL G+PI PG + V+QL +I K+ G+P+ E ++
Sbjct: 221 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 279
Query: 349 PNATLFKPREPYKRCIQETFKD-FPPSSLPLIETLLAIDPAERLT 392
PN T FK + + F+ PP ++ L LL P RLT
Sbjct: 280 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 324
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 157/285 (55%), Gaps = 18/285 (6%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
S+ IG G++ VY+AK +G++VA+KKV D +F RE+ I+R+LDH N
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 110
Query: 177 VIKLEGLVTS----RMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEP--QVKCYMHQLLSG 229
+++L S + L LV Y+ + +A K T P VK YM+QL
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 170
Query: 230 LEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
L + H+ G+ HRDIK NLL+D D VLK+ DFG A P S + + +YR PE
Sbjct: 171 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAPE 228
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348
L+ GATDY +D+WSAGC+LAELL G+PI PG + V+QL +I K+ G+P+ E ++
Sbjct: 229 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 287
Query: 349 PNATLFKPREPYKRCIQETFKD-FPPSSLPLIETLLAIDPAERLT 392
PN T FK + + F+ PP ++ L LL P RLT
Sbjct: 288 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 332
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 157/285 (55%), Gaps = 18/285 (6%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
S+ IG G++ VY+AK +G++VA+KKV D +F RE+ I+R+LDH N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 86
Query: 177 VIKLEGLVTS----RMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEP--QVKCYMHQLLSG 229
+++L S + L LV Y+ + +A K T P VK YM+QL
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 230 LEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
L + H+ G+ HRDIK NLL+D D VLK+ DFG A P S + + +YR PE
Sbjct: 147 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAPE 204
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348
L+ GATDY +D+WSAGC+LAELL G+PI PG + V+QL +I K+ G+P+ E ++
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 263
Query: 349 PNATLFKPREPYKRCIQETFKD-FPPSSLPLIETLLAIDPAERLT 392
PN T FK + + F+ PP ++ L LL P RLT
Sbjct: 264 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 308
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 157/285 (55%), Gaps = 18/285 (6%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
S+ IG G++ VY+AK +G++VA+KKV D +F RE+ I+R+LDH N
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 93
Query: 177 VIKLEGLVTS----RMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEP--QVKCYMHQLLSG 229
+++L S + L LV Y+ + +A K T P VK YM+QL
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 153
Query: 230 LEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
L + H+ G+ HRDIK NLL+D D VLK+ DFG A P S + + +YR PE
Sbjct: 154 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAPE 211
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348
L+ GATDY +D+WSAGC+LAELL G+PI PG + V+QL +I K+ G+P+ E ++
Sbjct: 212 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 270
Query: 349 PNATLFKPREPYKRCIQETFKD-FPPSSLPLIETLLAIDPAERLT 392
PN T FK + + F+ PP ++ L LL P RLT
Sbjct: 271 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 315
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 157/285 (55%), Gaps = 18/285 (6%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
S+ IG G++ VY+AK +G++VA+KKV D +F RE+ I+R+LDH N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 86
Query: 177 VIKLEGLVTS----RMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEP--QVKCYMHQLLSG 229
+++L S + L LV Y+ + +A K T P VK YM+QL
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 230 LEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
L + H+ G+ HRDIK NLL+D D VLK+ DFG A P S + + +YR PE
Sbjct: 147 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAPE 204
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348
L+ GATDY +D+WSAGC+LAELL G+PI PG + V+QL +I K+ G+P+ E ++
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 263
Query: 349 PNATLFKPREPYKRCIQETFKD-FPPSSLPLIETLLAIDPAERLT 392
PN T FK + + F+ PP ++ L LL P RLT
Sbjct: 264 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 308
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 157/285 (55%), Gaps = 18/285 (6%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
S+ IG G++ VY+AK +G++VA+KKV D +F RE+ I+R+LDH N
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 112
Query: 177 VIKLEGLVTS----RMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEP--QVKCYMHQLLSG 229
+++L S + L LV Y+ + +A K T P VK YM+QL
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 172
Query: 230 LEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
L + H+ G+ HRDIK NLL+D D VLK+ DFG A P S + + +YR PE
Sbjct: 173 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAPE 230
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348
L+ GATDY +D+WSAGC+LAELL G+PI PG + V+QL +I K+ G+P+ E ++
Sbjct: 231 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 289
Query: 349 PNATLFKPREPYKRCIQETFKD-FPPSSLPLIETLLAIDPAERLT 392
PN T FK + + F+ PP ++ L LL P RLT
Sbjct: 290 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 334
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 157/285 (55%), Gaps = 18/285 (6%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
S+ IG G++ VY+AK +G++VA+KKV D +F RE+ I+R+LDH N
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 82
Query: 177 VIKLEGLVTS----RMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEP--QVKCYMHQLLSG 229
+++L S + L LV Y+ + +A K T P VK YM+QL
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 142
Query: 230 LEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
L + H+ G+ HRDIK NLL+D D VLK+ DFG A P S + + +YR PE
Sbjct: 143 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAPE 200
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348
L+ GATDY +D+WSAGC+LAELL G+PI PG + V+QL +I K+ G+P+ E ++
Sbjct: 201 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 259
Query: 349 PNATLFKPREPYKRCIQETFKD-FPPSSLPLIETLLAIDPAERLT 392
PN T FK + + F+ PP ++ L LL P RLT
Sbjct: 260 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 304
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 157/285 (55%), Gaps = 18/285 (6%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
S+ IG G++ VY+AK +G++VA+KKV D +F RE+ I+R+LDH N
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 79
Query: 177 VIKLEGLVTS----RMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEP--QVKCYMHQLLSG 229
+++L S + L LV Y+ + +A K T P VK YM+QL
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 139
Query: 230 LEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
L + H+ G+ HRDIK NLL+D D VLK+ DFG A P S + + +YR PE
Sbjct: 140 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAPE 197
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348
L+ GATDY +D+WSAGC+LAELL G+PI PG + V+QL +I K+ G+P+ E ++
Sbjct: 198 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 256
Query: 349 PNATLFKPREPYKRCIQETFKD-FPPSSLPLIETLLAIDPAERLT 392
PN T FK + + F+ PP ++ L LL P RLT
Sbjct: 257 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 301
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 157/285 (55%), Gaps = 18/285 (6%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
S+ IG G++ VY+AK +G++VA+KKV D +F RE+ I+R+LDH N
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 153
Query: 177 VIKLEGLVTS----RMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEP--QVKCYMHQLLSG 229
+++L S + L LV Y+ + +A K T P VK YM+QL
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 213
Query: 230 LEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
L + H+ G+ HRDIK NLL+D D VLK+ DFG A P S + + +YR PE
Sbjct: 214 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAPE 271
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348
L+ GATDY +D+WSAGC+LAELL G+PI PG + V+QL +I K+ G+P+ E ++
Sbjct: 272 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 330
Query: 349 PNATLFKPREPYKRCIQETFKD-FPPSSLPLIETLLAIDPAERLT 392
PN T FK + + F+ PP ++ L LL P RLT
Sbjct: 331 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 375
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 155/292 (53%), Gaps = 19/292 (6%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
+ +EKI KIG+G+Y V+K ++ TG+IVA+KK +P K REI +L++L HP
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
N++ L L R L+LVF Y +H + + E VK Q L + CH
Sbjct: 63 NLVNL--LEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK 120
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATD 295
+ +HRD+K N+LI V+K+ DFG A + V T WYR PELL+G T
Sbjct: 121 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY-YDDEVATRWYRSPELLVGDTQ 179
Query: 296 YGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGS---------PSEEYWKKS 346
YG VD+W+ GC+ AELL+G P+ PG+++V+QL+ I K G + +Y+
Sbjct: 180 YGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGV 239
Query: 347 KLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398
K+P+ +P ++ F + +L L++ L +DP ERLT L+
Sbjct: 240 KIPDPEDMEP-------LELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 157/285 (55%), Gaps = 18/285 (6%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
S+ IG G++ VY+AK +G++VA+KKV D +F RE+ I+R+LDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 74
Query: 177 VIKLEGLVTS----RMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEP--QVKCYMHQLLSG 229
+++L S + L LV Y+ + +A K T P VK YM+QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 230 LEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
L + H+ G+ HRDIK NLL+D D VLK+ DFG A P S + + +YR PE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAPE 192
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348
L+ GATDY +D+WSAGC+LAELL G+PI PG + V+QL +I K+ G+P+ E ++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 349 PNATLFKPREPYKRCIQETFKD-FPPSSLPLIETLLAIDPAERLT 392
PN T FK + + F+ PP ++ L LL P RLT
Sbjct: 252 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 296
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 157/285 (55%), Gaps = 18/285 (6%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
S+ IG G++ VY+AK +G++VA+KKV D +F RE+ I+R+LDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 74
Query: 177 VIKLEGLVTS----RMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEP--QVKCYMHQLLSG 229
+++L S + L LV Y+ + +A K T P VK YM+QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 230 LEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
L + H+ G+ HRDIK NLL+D D VLK+ DFG A P S + + +YR PE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAPE 192
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348
L+ GATDY +D+WSAGC+LAELL G+PI PG + V+QL +I K+ G+P+ E ++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 349 PNATLFKPREPYKRCIQETFKD-FPPSSLPLIETLLAIDPAERLT 392
PN T FK + + F+ PP ++ L LL P RLT
Sbjct: 252 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 296
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 157/285 (55%), Gaps = 18/285 (6%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
S+ IG G++ VY+AK +G++VA+KKV D +F RE+ I+R+LDH N
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 78
Query: 177 VIKLEGLVTS----RMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEP--QVKCYMHQLLSG 229
+++L S + L LV Y+ + +A K T P VK YM+QL
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 138
Query: 230 LEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
L + H+ G+ HRDIK NLL+D D VLK+ DFG A P S + + +YR PE
Sbjct: 139 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAPE 196
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348
L+ GATDY +D+WSAGC+LAELL G+PI PG + V+QL +I K+ G+P+ E ++
Sbjct: 197 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 255
Query: 349 PNATLFKPREPYKRCIQETFKD-FPPSSLPLIETLLAIDPAERLT 392
PN T FK + + F+ PP ++ L LL P RLT
Sbjct: 256 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 300
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 157/285 (55%), Gaps = 18/285 (6%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
S+ IG G++ VY+AK +G++VA+KKV D +F RE+ I+R+LDH N
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 75
Query: 177 VIKLEGLVTS----RMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEP--QVKCYMHQLLSG 229
+++L S + L LV Y+ + +A K T P VK YM+QL
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 135
Query: 230 LEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
L + H+ G+ HRDIK NLL+D D VLK+ DFG A P S + + +YR PE
Sbjct: 136 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAPE 193
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348
L+ GATDY +D+WSAGC+LAELL G+PI PG + V+QL +I K+ G+P+ E ++
Sbjct: 194 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 252
Query: 349 PNATLFKPREPYKRCIQETFKD-FPPSSLPLIETLLAIDPAERLT 392
PN T FK + + F+ PP ++ L LL P RLT
Sbjct: 253 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 297
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 157/285 (55%), Gaps = 18/285 (6%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
S+ IG G++ VY+AK +G++VA+KKV D +F RE+ I+R+LDH N
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 87
Query: 177 VIKLEGLVTS----RMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEP--QVKCYMHQLLSG 229
+++L S + L LV Y+ + +A K T P VK YM+QL
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 147
Query: 230 LEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
L + H+ G+ HRDIK NLL+D D VLK+ DFG A P S + + +YR PE
Sbjct: 148 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAPE 205
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348
L+ GATDY +D+WSAGC+LAELL G+PI PG + V+QL +I K+ G+P+ E ++
Sbjct: 206 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 264
Query: 349 PNATLFKPREPYKRCIQETFKD-FPPSSLPLIETLLAIDPAERLT 392
PN T FK + + F+ PP ++ L LL P RLT
Sbjct: 265 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 309
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 157/285 (55%), Gaps = 18/285 (6%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
S+ IG G++ VY+AK +G++VA+KKV D +F RE+ I+R+LDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 74
Query: 177 VIKLEGLVTS----RMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEP--QVKCYMHQLLSG 229
+++L S + L LV Y+ + +A K T P VK YM+QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 230 LEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
L + H+ G+ HRDIK NLL+D D VLK+ DFG A P S + + +YR PE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAPE 192
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348
L+ GATDY +D+WSAGC+LAELL G+PI PG + V+QL +I K+ G+P+ E ++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 349 PNATLFKPREPYKRCIQETFKD-FPPSSLPLIETLLAIDPAERLT 392
PN T FK + + F+ PP ++ L LL P RLT
Sbjct: 252 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 296
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 157/285 (55%), Gaps = 18/285 (6%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
S+ IG G++ VY+AK +G++VA+KKV D +F RE+ I+R+LDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 74
Query: 177 VIKLEGLVTS----RMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEP--QVKCYMHQLLSG 229
+++L S + L LV Y+ + +A K T P VK YM+QL
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 230 LEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
L + H+ G+ HRDIK NLL+D D VLK+ DFG A P S + + +YR PE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAPE 192
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348
L+ GATDY +D+WSAGC+LAELL G+PI PG + V+QL +I K+ G+P+ E ++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 349 PNATLFKPREPYKRCIQETFKD-FPPSSLPLIETLLAIDPAERLT 392
PN T FK + + F+ PP ++ L LL P RLT
Sbjct: 252 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 296
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/282 (37%), Positives = 155/282 (54%), Gaps = 15/282 (5%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGL 183
+G G Y +V A D +G+ VA+KK+ K RE+L+L+ + H NVI L +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 184 VTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
T S YLV +M+ DL + +KF+E +++ ++Q+L GL++ H+ GV+
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMG---LKFSEEKIQYLVYQMLKGLKYIHSAGVV 148
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVG 299
HRD+K NL +++D LKI DFGLA D MT VVT WYR PE++L Y
Sbjct: 149 HRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQT 204
Query: 300 VDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF---KP 356
VD+WS GCI+AE+L GK + G+ ++QL +I K+ G P E+ +K A + P
Sbjct: 205 VDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLP 264
Query: 357 REPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398
+ P K Q F P + L+E +L +D +RLTA AL
Sbjct: 265 QTPRKDFTQ-LFPRASPQAADLLEKMLELDVDKRLTAAQALT 305
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/282 (36%), Positives = 155/282 (54%), Gaps = 15/282 (5%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGL 183
+G G Y +V A D +G+ VA+KK+ K RE+L+L+ + H NVI L +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 184 VTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
T S YLV +M+ DL + ++F+E +++ ++Q+L GL++ H+ GV+
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMG---MEFSEEKIQYLVYQMLKGLKYIHSAGVV 166
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVG 299
HRD+K NL +++D LKI DFGLA D MT VVT WYR PE++L Y
Sbjct: 167 HRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQT 222
Query: 300 VDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF---KP 356
VD+WS GCI+AE+L GK + G+ ++QL +I K+ G P E+ +K A + P
Sbjct: 223 VDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLP 282
Query: 357 REPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398
+ P K Q F P + L+E +L +D +RLTA AL
Sbjct: 283 QTPRKDFTQ-LFPRASPQAADLLEKMLELDVDKRLTAAQALT 323
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/285 (38%), Positives = 156/285 (54%), Gaps = 18/285 (6%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
S+ IG G++ VY+AK +G++VA+KKV + F RE+ I+R+LDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL------QGKAFKNRELQIMRKLDHCN 74
Query: 177 VIKLEGLVTS----RMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEP--QVKCYMHQLLSG 229
+++L S + L LV Y+ + +A K T P VK YM+QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 230 LEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
L + H+ G+ HRDIK NLL+D D VLK+ DFG A P S + + +YR PE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAPE 192
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348
L+ GATDY +D+WSAGC+LAELL G+PI PG + V+QL +I K+ G+P+ E ++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 349 PNATLFKPREPYKRCIQETFKD-FPPSSLPLIETLLAIDPAERLT 392
PN T FK + + F+ PP ++ L LL P RLT
Sbjct: 252 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 296
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 172/321 (53%), Gaps = 45/321 (14%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPES-VKFMAREILILRRLD-HP 175
+E + K+G+G Y V+K+ D TG++VA+KK+ FD + + + REI+IL L H
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKI-FDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYM-HQLLSGLEHCH 234
N++ L ++ + +YLVF YME DL + + EP K Y+ +QL+ +++ H
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLH 126
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF-------------------DPNHKHP- 274
+ G+LHRD+K SN+L++ + +K+ADFGL+ F + + P
Sbjct: 127 SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+T V T WYR PE+LLG+T Y G+D+WS GCIL E+L GKPI PG + + QL +I +
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGV 246
Query: 335 CGSPSEEYWKKSKLPNATLF--------KPREPYKRCIQETFK----------DFPPSSL 376
PS E + + P A + R+ KR I +K D +L
Sbjct: 247 IDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEAL 306
Query: 377 PLIETLLAIDPAERLTATVAL 397
L++ LL +P +R++A AL
Sbjct: 307 DLLDKLLQFNPNKRISANDAL 327
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/285 (38%), Positives = 155/285 (54%), Gaps = 18/285 (6%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
S+ IG G++ VY+AK +G++VA+KKV + F RE+ I+R+LDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL------QGKAFKNRELQIMRKLDHCN 74
Query: 177 VIKLEGLVTS----RMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEP--QVKCYMHQLLSG 229
+++L S + L LV Y+ + +A K T P VK YM+QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 230 LEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
L + H+ G+ HRDIK NLL+D D VLK+ DFG A P S + + +YR PE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAPE 192
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348
L+ GATDY +D+WSAGC+LAELL G+PI PG + V+QL +I K+ G+P+ E ++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 349 PNATLFKPREPYKRCIQETFKD-FPPSSLPLIETLLAIDPAERLT 392
PN T F + + F+ PP ++ L LL P RLT
Sbjct: 252 PNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 296
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/285 (38%), Positives = 155/285 (54%), Gaps = 18/285 (6%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
S+ IG G++ VY+AK +G++VA+KKV + F RE+ I+R+LDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL------QGKAFKNRELQIMRKLDHCN 74
Query: 177 VIKLEGLVTS----RMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEP--QVKCYMHQLLSG 229
+++L S + L LV Y+ + +A K T P VK YM+QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 230 LEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
L + H+ G+ HRDIK NLL+D D VLK+ DFG A P S + + +YR PE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAPE 192
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348
L+ GATDY +D+WSAGC+LAELL G+PI PG + V+QL +I K+ G+P+ E ++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 349 PNATLFKPREPYKRCIQETFKD-FPPSSLPLIETLLAIDPAERLT 392
PN T F + + F+ PP ++ L LL P RLT
Sbjct: 252 PNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 296
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 156/299 (52%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 128
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 184
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L A Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 185 TRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 170/320 (53%), Gaps = 19/320 (5%)
Query: 87 RGEQVAAGWPPWLTAVCGEALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVAL 146
R E V G P + V G+ + PR + ++ IG+G Y V A D + VA+
Sbjct: 19 RTEGVGPGVPGEVEMVKGQPFDVG-PR----YTQLQYIGEGAYGMVSSAYDHVRKTRVAI 73
Query: 147 KKVR-FDNLEPESVKFMAREILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHD 202
KK+ F++ + REI IL R H NVI + ++ T +Y+V ME D
Sbjct: 74 KKISPFEH--QTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETD 131
Query: 203 LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFG 262
L L S ++ + + +++Q+L GL++ H+ VLHRD+K SNLLI+ LKI DFG
Sbjct: 132 LYKLLKSQQL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFG 189
Query: 263 LASFFDPNHKHP--MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMP 320
LA DP H H +T V T WYR PE++L + Y +D+WS GCILAE+L+ +PI P
Sbjct: 190 LARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 249
Query: 321 GRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPS---SLP 377
G+ ++QL+ I + GSPS+E A + P K + K FP S +L
Sbjct: 250 GKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQSLPSKTKVAWA-KLFPKSDSKALD 308
Query: 378 LIETLLAIDPAERLTATVAL 397
L++ +L +P +R+T AL
Sbjct: 309 LLDRMLTFNPNKRITVEEAL 328
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 161/302 (53%), Gaps = 18/302 (5%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V + D+ +G +A+KK+ K R
Sbjct: 40 QELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR 99
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 100 ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 157
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 158 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 213
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y + VD+WS GCI+AELL G+ + PG + QL +I +L G+P
Sbjct: 214 TRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPA 273
Query: 341 EYWKKSKLP-----NATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATV 395
S++P N P+ P KR + F P ++ L+E +L +D +R+TA+
Sbjct: 274 SVI--SRMPSHEARNYINSLPQMP-KRNFADVFIGANPLAVDLLEKMLVLDTDKRITASE 330
Query: 396 AL 397
AL
Sbjct: 331 AL 332
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 17 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 76
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 134
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE----MTGYVA 190
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 250
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 251 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + IG G Y +V A D TG VA+KK+ K R
Sbjct: 16 QELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 75
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 133
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVA 189
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 249
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 250 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + S K T+ V+
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQ--KLTDDHVQ 128
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGL D MT V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE----MTGYVA 184
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 31 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 90
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 148
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 149 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 204
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 264
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 265 ELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 323
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 13 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 72
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 130
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 131 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE----MTGYVA 186
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 246
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 247 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 30 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 89
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 147
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 148 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 203
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 263
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 264 ELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 322
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 164 bits (416), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 70
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 128
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 184
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 245 ELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 164 bits (416), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQ--KLTDDHVQ 128
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVA 184
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 17 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 76
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 134
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 190
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 250
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 251 ELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 16 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 75
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 133
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVA 189
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 249
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 250 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 164 bits (415), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 7 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 66
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 124
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 180
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 240
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 241 ELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 164 bits (415), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQ--KLTDDHVQ 128
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 184
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 164 bits (415), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 22 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 81
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 139
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 140 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVA 195
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 255
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 256 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 314
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 164 bits (415), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 128
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 184
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 17 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 76
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 134
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 190
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 250
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 251 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 128
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 184
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 21 QELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 80
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 81 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 138
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 139 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 194
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 195 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 254
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 255 ELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 313
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 16 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 75
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 133
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 189
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 249
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 250 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 128
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 184
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 10 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 69
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 70 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 127
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 128 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 183
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 184 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 243
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 244 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 302
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 31 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 90
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 148
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 149 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 204
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 264
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 265 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 323
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 160/293 (54%), Gaps = 24/293 (8%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIK---L 180
+G G V+ A D K VA+KK+ + P+SVK REI I+RRLDH N++K +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTD--PQSVKHALREIKIIRRLDHDNIVKVFEI 76
Query: 181 EGLVTSRMS---------CSLYLVFHYMEHDLAG-LAASPEVKFTEPQVKCYMHQLLSGL 230
G S+++ S+Y+V YME DLA L P E + +M+QLL GL
Sbjct: 77 LGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP---LLEEHARLFMYQLLRGL 133
Query: 231 EHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHP--MTSRVVTLWYRPP 287
++ H+ VLHRD+K +NL I+ +D VLKI DFGLA DP++ H ++ +VT WYR P
Sbjct: 134 KYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSP 193
Query: 288 ELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK-- 345
LLL +Y +D+W+AGCI AE+L GK + G E+EQ+ I + EE ++
Sbjct: 194 RLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELL 253
Query: 346 SKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398
S +P EP+K Q ++ +E +L P +RLTA AL+
Sbjct: 254 SVIPVYIRNDMTEPHKPLTQ-LLPGISREAVDFLEQILTFSPMDRLTAEEALS 305
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 17 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 76
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 134
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 190
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 250
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 251 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 128
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 184
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 16 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 75
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 133
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 189
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 249
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 250 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 34 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 93
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 151
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 152 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 207
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 267
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 268 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 326
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 30 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 89
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 147
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 148 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 203
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 263
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 264 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 322
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 128
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 184
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 128
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 184
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 23 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 82
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 140
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 141 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 196
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 256
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 257 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 315
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 128
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 184
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 23 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 82
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 140
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 141 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 196
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 256
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 257 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 315
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 13 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 72
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 130
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 131 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 186
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 246
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 247 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 9 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 68
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 69 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 126
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 127 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 182
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 183 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 242
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 243 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 301
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 13 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 72
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 130
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 131 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 186
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 246
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 247 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 22 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 81
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 139
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 140 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 195
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 255
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 256 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 314
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 18 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 77
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 135
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 136 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 191
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 251
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 252 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 23 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR 82
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 140
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 141 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 196
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 256
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 257 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 315
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 13 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 72
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 130
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 131 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 186
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 246
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 247 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 7 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 66
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 124
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 180
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 240
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 241 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 128
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGXVA 184
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 8 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 67
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 125
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 126 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 181
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 241
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 242 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 300
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 153/293 (52%), Gaps = 15/293 (5%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILR 170
+P R ++ + +G G Y +V A D TG VA+KK+ K RE+ +L+
Sbjct: 16 VPER---YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 171 RLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQL 226
+ H NVI L + T S +YLV H M DL + K T+ V+ ++Q+
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--AKLTDDHVQFLIYQI 130
Query: 227 LSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRP 286
L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V T WYR
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 186
Query: 287 PELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS 346
PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P E KK
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 347 KLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
+A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 247 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 8 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 67
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 125
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D MT V
Sbjct: 126 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVA 181
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 241
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 242 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 300
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 159/294 (54%), Gaps = 19/294 (6%)
Query: 113 RRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL 172
+R ++ IG G++ V++AK ++ VA+KKV D +F RE+ I+R +
Sbjct: 37 QREIAYTNCKVIGNGSFGVVFQAK-LVESDEVAIKKVLQDK------RFKNRELQIMRIV 89
Query: 173 DHPNVIKLEGLVTS----RMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEPQ--VKCYMHQ 225
HPNV+ L+ S + L LV Y+ + + ++K T P +K YM+Q
Sbjct: 90 KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQ 149
Query: 226 LLSGLEHCHNNGVLHRDIKGSNLLIDD-DGVLKIADFGLASFFDPNHKHPMTSRVVTLWY 284
LL L + H+ G+ HRDIK NLL+D GVLK+ DFG A P S + + +Y
Sbjct: 150 LLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE--PNVSXICSRYY 207
Query: 285 RPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344
R PEL+ GAT+Y +D+WS GC++AEL+ G+P+ PG + ++QL +I K+ G+PS E K
Sbjct: 208 RAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIK 267
Query: 345 KSKLPNATLFKPREPYKRCIQETFKD-FPPSSLPLIETLLAIDPAERLTATVAL 397
PN K + + F+ PP ++ LI LL P+ RLTA AL
Sbjct: 268 TMN-PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEAL 320
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 154/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 31 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 90
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 148
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D M V
Sbjct: 149 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MXGXVA 204
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 264
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 265 ELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 323
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 128
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI D+GLA D MT V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE----MTGYVA 184
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 158/295 (53%), Gaps = 18/295 (6%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV--RFDNLEPESVKFMAREILILRRLD 173
D +E I+ IG G Y V A+ LTG+ VA+KK+ FD + + K RE+ IL+
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVT--NAKRTLRELKILKHFK 111
Query: 174 HPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSG 229
H N+I ++ ++ + S+Y+V ME DL + S + T V+ +++QLL G
Sbjct: 112 HDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ-PLTLEHVRYFLYQLLRG 170
Query: 230 LEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF---DPNHKHPMTSRVVTLWYRP 286
L++ H+ V+HRD+K SNLL++++ LKI DFG+A H++ MT V T WYR
Sbjct: 171 LKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 230
Query: 287 PELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS 346
PEL+L +Y +DLWS GCI E+LA + + PG+ V QL I + G+PS +
Sbjct: 231 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAV 290
Query: 347 KLPNATLF----KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
+ PR+P + + +L L+ +L +P+ R++A AL
Sbjct: 291 GAERVRAYIQSLPPRQPVP--WETVYPGADRQALSLLGRMLRFEPSARISAAAAL 343
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 154/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 70
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 128
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D M V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MAGFVA 184
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 154/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 70
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 128
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D M V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MAGFVA 184
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 245 ELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 158/295 (53%), Gaps = 18/295 (6%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV--RFDNLEPESVKFMAREILILRRLD 173
D +E I+ IG G Y V A+ LTG+ VA+KK+ FD + + K RE+ IL+
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVT--NAKRTLRELKILKHFK 112
Query: 174 HPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSG 229
H N+I ++ ++ + S+Y+V ME DL + S + T V+ +++QLL G
Sbjct: 113 HDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ-PLTLEHVRYFLYQLLRG 171
Query: 230 LEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF---DPNHKHPMTSRVVTLWYRP 286
L++ H+ V+HRD+K SNLL++++ LKI DFG+A H++ MT V T WYR
Sbjct: 172 LKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 231
Query: 287 PELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS 346
PEL+L +Y +DLWS GCI E+LA + + PG+ V QL I + G+PS +
Sbjct: 232 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAV 291
Query: 347 KLPNATLF----KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
+ PR+P + + +L L+ +L +P+ R++A AL
Sbjct: 292 GAERVRAYIQSLPPRQPVP--WETVYPGADRQALSLLGRMLRFEPSARISAAAAL 344
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 154/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 34 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 93
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 151
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D M V
Sbjct: 152 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MXGYVA 207
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 267
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 268 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 326
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 18 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 77
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 135
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA + MT V
Sbjct: 136 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVA 191
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 251
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 252 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 154/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 7 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 66
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 124
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA D M V
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MAGFVA 180
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 240
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 241 ELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 18 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 77
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 135
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA + MT V
Sbjct: 136 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVA 191
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 251
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 252 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 18 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 77
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 135
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DFGLA + MT V
Sbjct: 136 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVA 191
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 251
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 252 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 166/318 (52%), Gaps = 40/318 (12%)
Query: 123 KIGQGTYSNVYKAKDMLTGKI--VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
K+G+GTY +VYKAK ALK++ + + REI +LR L HPNVI L
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSA----CREIALLRELKHPNVISL 83
Query: 181 EGLVTSRMSCSLYLVFHYMEHDL--------AGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
+ + S ++L+F Y EHDL A A V+ VK ++Q+L G+ +
Sbjct: 84 QKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHY 143
Query: 233 CHNNGVLHRDIKGSNLLI----DDDGVLKIADFGLASFFDPNHKHPMTSR---VVTLWYR 285
H N VLHRD+K +N+L+ + G +KIAD G A F+ K P+ VVT WYR
Sbjct: 144 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLK-PLADLDPVVVTFWYR 202
Query: 286 PPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTE---------VEQLHKIYKLCG 336
PELLLGA Y +D+W+ GCI AELL +PI R E +QL +I+ + G
Sbjct: 203 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG 262
Query: 337 SPSEEYWKK-SKLP-NATLFKP--REPYKRC----IQETFKDFPPS-SLPLIETLLAIDP 387
P+++ W+ K+P ++TL K R Y C E K P S + L++ LL +DP
Sbjct: 263 FPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDP 322
Query: 388 AERLTATVALNSEVIFQD 405
+R+T+ A+ +D
Sbjct: 323 IKRITSEQAMQDPYFLED 340
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 161/305 (52%), Gaps = 20/305 (6%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMA 163
E + G + + + IG+G Y V A D + VA+KK+ F++ +
Sbjct: 32 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTL 89
Query: 164 REILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
REI IL R H N+I + ++ T +YLV H M DL L + + + +
Sbjct: 90 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHL--SNDHIC 147
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSR 278
+++Q+L GL++ H+ VLHRD+K SNLL++ LKI DFGLA DP+H H +T
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 207
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
V T WYR PE++L + Y +D+WS GCILAE+L+ +PI PG+ ++QL+ I + GSP
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 267
Query: 339 SEEYWK---KSKLPNATLFKPRE---PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT 392
S+E K N L P + P+ R F + +L L++ +L +P +R+
Sbjct: 268 SQEDLNCIINLKARNYLLSLPHKNKVPWNRL----FPNADSKALDLLDKMLTFNPHKRIE 323
Query: 393 ATVAL 397
AL
Sbjct: 324 VEQAL 328
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 154/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 70
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 128
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI DF LA D MT V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE----MTGYVA 184
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 154/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 128
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI FGLA D MT V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE----MTGYVA 184
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 161/305 (52%), Gaps = 20/305 (6%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMA 163
E + G + + + IG+G Y V A D L VA+KK+ F++ +
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTL 73
Query: 164 REILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
REI IL R H N+I + ++ T +Y+V ME DL L + + + +
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHIC 131
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSR 278
+++Q+L GL++ H+ VLHRD+K SNLL++ LKI DFGLA DP+H H +T
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
V T WYR PE++L + Y +D+WS GCILAE+L+ +PI PG+ ++QL+ I + GSP
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
Query: 339 SEEYWK---KSKLPNATLFKPRE---PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT 392
S+E K N L P + P+ R F + +L L++ +L +P +R+
Sbjct: 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRL----FPNADSKALDLLDKMLTFNPHKRIE 307
Query: 393 ATVAL 397
AL
Sbjct: 308 VEQAL 312
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 161/305 (52%), Gaps = 20/305 (6%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMA 163
E + G + + + IG+G Y V A D L VA+KK+ F++ +
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYXQRTL 73
Query: 164 REILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
REI IL R H N+I + ++ T +Y+V ME DL L + + + +
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHIC 131
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSR 278
+++Q+L GL++ H+ VLHRD+K SNLL++ LKI DFGLA DP+H H +T
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
V T WYR PE++L + Y +D+WS GCILAE+L+ +PI PG+ ++QL+ I + GSP
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
Query: 339 SEEYWK---KSKLPNATLFKPRE---PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT 392
S+E K N L P + P+ R F + +L L++ +L +P +R+
Sbjct: 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRL----FPNADSKALDLLDKMLTFNPHKRIE 307
Query: 393 ATVAL 397
AL
Sbjct: 308 VEQAL 312
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 161/305 (52%), Gaps = 20/305 (6%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMA 163
E + G + + + IG+G Y V A D L VA+KK+ F++ +
Sbjct: 17 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTL 74
Query: 164 REILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
REI IL R H N+I + ++ T +Y+V ME DL L + + + +
Sbjct: 75 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHIC 132
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSR 278
+++Q+L GL++ H+ VLHRD+K SNLL++ LKI DFGLA DP+H H +T
Sbjct: 133 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 192
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
V T WYR PE++L + Y +D+WS GCILAE+L+ +PI PG+ ++QL+ I + GSP
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 252
Query: 339 SEEYWK---KSKLPNATLFKPRE---PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT 392
S+E K N L P + P+ R F + +L L++ +L +P +R+
Sbjct: 253 SQEDLNCIINLKARNYLLSLPHKNKVPWNRL----FPNADSKALDLLDKMLTFNPHKRIE 308
Query: 393 ATVAL 397
AL
Sbjct: 309 VEQAL 313
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 161/305 (52%), Gaps = 20/305 (6%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMA 163
E + G + + + IG+G Y V A D L VA+KK+ F++ +
Sbjct: 18 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTL 75
Query: 164 REILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
REI IL R H N+I + ++ T +Y+V ME DL L + + + +
Sbjct: 76 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHIC 133
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSR 278
+++Q+L GL++ H+ VLHRD+K SNLL++ LKI DFGLA DP+H H +T
Sbjct: 134 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 193
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
V T WYR PE++L + Y +D+WS GCILAE+L+ +PI PG+ ++QL+ I + GSP
Sbjct: 194 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 253
Query: 339 SEEYWK---KSKLPNATLFKPRE---PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT 392
S+E K N L P + P+ R F + +L L++ +L +P +R+
Sbjct: 254 SQEDLNCIINLKARNYLLSLPHKNKVPWNRL----FPNADSKALDLLDKMLTFNPHKRIE 309
Query: 393 ATVAL 397
AL
Sbjct: 310 VEQAL 314
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 161/305 (52%), Gaps = 20/305 (6%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMA 163
E + G + + + IG+G Y V A D L VA+KK+ F++ +
Sbjct: 9 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTL 66
Query: 164 REILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
REI IL R H N+I + ++ T +Y+V ME DL L + + + +
Sbjct: 67 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHIC 124
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSR 278
+++Q+L GL++ H+ VLHRD+K SNLL++ LKI DFGLA DP+H H +T
Sbjct: 125 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 184
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
V T WYR PE++L + Y +D+WS GCILAE+L+ +PI PG+ ++QL+ I + GSP
Sbjct: 185 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 244
Query: 339 SEEYWK---KSKLPNATLFKPRE---PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT 392
S+E K N L P + P+ R F + +L L++ +L +P +R+
Sbjct: 245 SQEDLNCIINLKARNYLLSLPHKNKVPWNRL----FPNADSKALDLLDKMLTFNPHKRIE 300
Query: 393 ATVAL 397
AL
Sbjct: 301 VEQAL 305
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 161/305 (52%), Gaps = 20/305 (6%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMA 163
E + G + + + IG+G Y V A D L VA+KK+ F++ +
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTL 73
Query: 164 REILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
REI IL R H N+I + ++ T +Y+V ME DL L + + + +
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHIC 131
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSR 278
+++Q+L GL++ H+ VLHRD+K SNLL++ LKI DFGLA DP+H H +T
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
V T WYR PE++L + Y +D+WS GCILAE+L+ +PI PG+ ++QL+ I + GSP
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
Query: 339 SEEYWK---KSKLPNATLFKPRE---PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT 392
S+E K N L P + P+ R F + +L L++ +L +P +R+
Sbjct: 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRL----FPNADSKALDLLDKMLTFNPHKRIE 307
Query: 393 ATVAL 397
AL
Sbjct: 308 VEQAL 312
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 161/305 (52%), Gaps = 20/305 (6%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMA 163
E + G + + + IG+G Y V A D L VA+KK+ F++ +
Sbjct: 10 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTL 67
Query: 164 REILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
REI IL R H N+I + ++ T +Y+V ME DL L + + + +
Sbjct: 68 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHIC 125
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSR 278
+++Q+L GL++ H+ VLHRD+K SNLL++ LKI DFGLA DP+H H +T
Sbjct: 126 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 185
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
V T WYR PE++L + Y +D+WS GCILAE+L+ +PI PG+ ++QL+ I + GSP
Sbjct: 186 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 245
Query: 339 SEEYWK---KSKLPNATLFKPRE---PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT 392
S+E K N L P + P+ R F + +L L++ +L +P +R+
Sbjct: 246 SQEDLNCIINLKARNYLLSLPHKNKVPWNRL----FPNADSKALDLLDKMLTFNPHKRIE 301
Query: 393 ATVAL 397
AL
Sbjct: 302 VEQAL 306
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 154/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 128
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI D GLA D MT V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE----MTGYVA 184
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 154/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 128
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI D GLA D MT V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE----MTGYVA 184
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 154/299 (51%), Gaps = 12/299 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
+ LN I + ++ + +G G Y +V A D TG VA+KK+ K R
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
E+ +L+ + H NVI L + T S +YLV H M DL + K T+ V+
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQ 128
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV 280
++Q+L GL++ H+ ++HRD+K SNL +++D LKI D GLA D MT V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE----MTGYVA 184
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 340
T WYR PE++L Y VD+WS GCI+AELL G+ + PG ++QL I +L G+P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 341 EYWKKSKLPNATLF--KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
E KK +A + + K F P ++ L+E +L +D +R+TA AL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 159/301 (52%), Gaps = 12/301 (3%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMA 163
E + G + + + IG+G Y V A D + VA+KK+ F++ +
Sbjct: 12 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTL 69
Query: 164 REILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
REI IL R H N+I + ++ T +Y+V ME DL L + + + +
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHIC 127
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSR 278
+++Q+L GL++ H+ VLHRD+K SNLL++ LKI DFGLA DP+H H +T
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
V T WYR PE++L + Y +D+WS GCILAE+L+ +PI PG+ ++QL+ I + GSP
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
Query: 339 SEEYWKKSKLPNATLFKPREPYKRCI--QETFKDFPPSSLPLIETLLAIDPAERLTATVA 396
S+E A + P+K + F + +L L++ +L +P +R+ A
Sbjct: 248 SQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 397 L 397
L
Sbjct: 308 L 308
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 159/301 (52%), Gaps = 12/301 (3%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMA 163
E + G + + + IG+G Y V A D + VA+KK+ F++ +
Sbjct: 12 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTL 69
Query: 164 REILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
REI IL R H N+I + ++ T +Y+V ME DL L + + + +
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHIC 127
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSR 278
+++Q+L GL++ H+ VLHRD+K SNLL++ LKI DFGLA DP+H H +T
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEY 187
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
V T WYR PE++L + Y +D+WS GCILAE+L+ +PI PG+ ++QL+ I + GSP
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
Query: 339 SEEYWKKSKLPNATLFKPREPYKRCI--QETFKDFPPSSLPLIETLLAIDPAERLTATVA 396
S+E A + P+K + F + +L L++ +L +P +R+ A
Sbjct: 248 SQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 397 L 397
L
Sbjct: 308 L 308
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 160/305 (52%), Gaps = 20/305 (6%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMA 163
E + G + + + IG+G Y V A D L VA+KK+ F++ +
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTL 73
Query: 164 REILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
REI IL R H N+I + ++ T +Y+V ME DL L + + +
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHL--SNDHIC 131
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSR 278
+++Q+L GL++ H+ VLHRD+K SNLL++ LKI DFGLA DP+H H +T
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
V T WYR PE++L + Y +D+WS GCILAE+L+ +PI PG+ ++QL+ I + GSP
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
Query: 339 SEEYWK---KSKLPNATLFKPRE---PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT 392
S+E K N L P + P+ R F + +L L++ +L +P +R+
Sbjct: 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNR----LFPNADSKALDLLDKMLTFNPHKRIE 307
Query: 393 ATVAL 397
AL
Sbjct: 308 VEQAL 312
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 161/305 (52%), Gaps = 20/305 (6%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMA 163
E + G + + + IG+G Y V A D L VA++K+ F++ +
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEH--QTYCQRTL 73
Query: 164 REILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
REI IL R H N+I + ++ T +Y+V ME DL L + + + +
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHIC 131
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSR 278
+++Q+L GL++ H+ VLHRD+K SNLL++ LKI DFGLA DP+H H +T
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
V T WYR PE++L + Y +D+WS GCILAE+L+ +PI PG+ ++QL+ I + GSP
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
Query: 339 SEEYWK---KSKLPNATLFKPRE---PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT 392
S+E K N L P + P+ R F + +L L++ +L +P +R+
Sbjct: 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRL----FPNADSKALDLLDKMLTFNPHKRIE 307
Query: 393 ATVAL 397
AL
Sbjct: 308 VEQAL 312
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 161/305 (52%), Gaps = 20/305 (6%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMA 163
E + G + + + IG+G Y V A D + VA+KK+ F++ +
Sbjct: 14 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTL 71
Query: 164 REILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
REI IL R H N+I + ++ T +Y+V ME DL L + + + +
Sbjct: 72 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHIC 129
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSR 278
+++Q+L GL++ H+ VLHRD+K SNLL++ LKI DFGLA DP+H H +T
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 189
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
V T WYR PE++L + Y +D+WS GCILAE+L+ +PI PG+ ++QL+ I + GSP
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 249
Query: 339 SEEYWK---KSKLPNATLFKPRE---PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT 392
S+E K N L P + P+ R F + +L L++ +L +P +R+
Sbjct: 250 SQEDLNCIINLKARNYLLSLPHKNKVPWNRL----FPNADSKALDLLDKMLTFNPHKRIE 305
Query: 393 ATVAL 397
AL
Sbjct: 306 VEQAL 310
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 161/305 (52%), Gaps = 20/305 (6%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMA 163
E + G + + + IG+G Y V A D + VA+KK+ F++ +
Sbjct: 20 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTL 77
Query: 164 REILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
REI IL R H N+I + ++ T +Y+V ME DL L + + + +
Sbjct: 78 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHIC 135
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSR 278
+++Q+L GL++ H+ VLHRD+K SNLL++ LKI DFGLA DP+H H +T
Sbjct: 136 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 195
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
V T WYR PE++L + Y +D+WS GCILAE+L+ +PI PG+ ++QL+ I + GSP
Sbjct: 196 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 255
Query: 339 SEEYWK---KSKLPNATLFKPRE---PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT 392
S+E K N L P + P+ R F + +L L++ +L +P +R+
Sbjct: 256 SQEDLNCIINLKARNYLLSLPHKNKVPWNRL----FPNADSKALDLLDKMLTFNPHKRIE 311
Query: 393 ATVAL 397
AL
Sbjct: 312 VEQAL 316
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 161/305 (52%), Gaps = 20/305 (6%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMA 163
E + G + + + IG+G Y V A D + VA+KK+ F++ +
Sbjct: 12 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTL 69
Query: 164 REILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
REI IL R H N+I + ++ T +Y+V ME DL L + + + +
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHIC 127
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSR 278
+++Q+L GL++ H+ VLHRD+K SNLL++ LKI DFGLA DP+H H +T
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
V T WYR PE++L + Y +D+WS GCILAE+L+ +PI PG+ ++QL+ I + GSP
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
Query: 339 SEEYWK---KSKLPNATLFKPRE---PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT 392
S+E K N L P + P+ R F + +L L++ +L +P +R+
Sbjct: 248 SQEDLNCIINLKARNYLLSLPHKNKVPWNRL----FPNADSKALDLLDKMLTFNPHKRIE 303
Query: 393 ATVAL 397
AL
Sbjct: 304 VEQAL 308
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 161/305 (52%), Gaps = 20/305 (6%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMA 163
E + G + + + IG+G Y V A D + VA+KK+ F++ +
Sbjct: 12 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTL 69
Query: 164 REILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
REI IL R H N+I + ++ T +Y+V ME DL L + + + +
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHIC 127
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSR 278
+++Q+L GL++ H+ VLHRD+K SNLL++ LKI DFGLA DP+H H +T
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
V T WYR PE++L + Y +D+WS GCILAE+L+ +PI PG+ ++QL+ I + GSP
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
Query: 339 SEEYWK---KSKLPNATLFKPRE---PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT 392
S+E K N L P + P+ R F + +L L++ +L +P +R+
Sbjct: 248 SQEDLNCIINLKARNYLLSLPHKNKVPWNRL----FPNADSKALDLLDKMLTFNPHKRIE 303
Query: 393 ATVAL 397
AL
Sbjct: 304 VEQAL 308
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 161/305 (52%), Gaps = 20/305 (6%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMA 163
E + G + + + IG+G Y V A D + VA+KK+ F++ +
Sbjct: 32 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTL 89
Query: 164 REILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
REI IL R H N+I + ++ T +Y+V ME DL L + + + +
Sbjct: 90 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHIC 147
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSR 278
+++Q+L GL++ H+ VLHRD+K SNLL++ LKI DFGLA DP+H H +T
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 207
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
V T WYR PE++L + Y +D+WS GCILAE+L+ +PI PG+ ++QL+ I + GSP
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 267
Query: 339 SEEYWK---KSKLPNATLFKPRE---PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT 392
S+E K N L P + P+ R F + +L L++ +L +P +R+
Sbjct: 268 SQEDLNCIINLKARNYLLSLPHKNKVPWNRL----FPNADSKALDLLDKMLTFNPHKRIE 323
Query: 393 ATVAL 397
AL
Sbjct: 324 VEQAL 328
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 161/305 (52%), Gaps = 20/305 (6%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMA 163
E + G + + + IG+G Y V A D + VA+KK+ F++ +
Sbjct: 12 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTL 69
Query: 164 REILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
REI IL R H N+I + ++ T +Y+V ME DL L + + + +
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHIC 127
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSR 278
+++Q+L GL++ H+ VLHRD+K SNLL++ LKI DFGLA DP+H H +T
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
V T WYR PE++L + Y +D+WS GCILAE+L+ +PI PG+ ++QL+ I + GSP
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
Query: 339 SEEYWK---KSKLPNATLFKPRE---PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT 392
S+E K N L P + P+ R F + +L L++ +L +P +R+
Sbjct: 248 SQEDLNCIINLKARNYLLSLPHKNKVPWNRL----FPNADSKALDLLDKMLTFNPHKRIE 303
Query: 393 ATVAL 397
AL
Sbjct: 304 VEQAL 308
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 160/305 (52%), Gaps = 20/305 (6%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMA 163
E + G + + + IG+G Y V A D L VA+KK+ F++ +
Sbjct: 10 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTL 67
Query: 164 REILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
REI IL R H N+I + ++ T +Y+V ME DL L + + + +
Sbjct: 68 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHIC 125
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSR 278
+++Q+L GL++ H+ VLHRD+K SNLL++ LKI DFGLA DP+H H +T
Sbjct: 126 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 185
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
V T WYR PE++L + Y +D+WS GCILAE+L+ +PI PG+ ++QL+ I + GSP
Sbjct: 186 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 245
Query: 339 SEEYWK---KSKLPNATLFKPRE---PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT 392
+E K N L P + P+ R F + +L L++ +L +P +R+
Sbjct: 246 EQEDLNCIINLKARNYLLSLPHKNKVPWNRL----FPNADSKALDLLDKMLTFNPHKRIE 301
Query: 393 ATVAL 397
AL
Sbjct: 302 VEQAL 306
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 160/305 (52%), Gaps = 20/305 (6%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMA 163
E + G + + + IG+G Y V A D L VA+KK+ F++ +
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTL 73
Query: 164 REILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
REI IL R H N+I + ++ T +Y+V ME DL L + + + +
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHIC 131
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSR 278
+++Q+L GL++ H+ VLHRD+K SNLL++ LKI DFGLA DP+H H +
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEX 191
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
V T WYR PE++L + Y +D+WS GCILAE+L+ +PI PG+ ++QL+ I + GSP
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
Query: 339 SEEYWK---KSKLPNATLFKPRE---PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT 392
S+E K N L P + P+ R F + +L L++ +L +P +R+
Sbjct: 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRL----FPNADSKALDLLDKMLTFNPHKRIE 307
Query: 393 ATVAL 397
AL
Sbjct: 308 VEQAL 312
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 160/305 (52%), Gaps = 20/305 (6%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMA 163
E + G + + + IG+G Y V A D L VA+KK+ F++ +
Sbjct: 17 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTL 74
Query: 164 REILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
REI IL R H N+I + ++ T +Y+V ME DL L + + + +
Sbjct: 75 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHIC 132
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSR 278
+++Q+L GL++ H+ VLHRD+K SNLL++ LKI DFGLA DP+H H +
Sbjct: 133 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEX 192
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
V T WYR PE++L + Y +D+WS GCILAE+L+ +PI PG+ ++QL+ I + GSP
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 252
Query: 339 SEEYWK---KSKLPNATLFKPRE---PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT 392
S+E K N L P + P+ R F + +L L++ +L +P +R+
Sbjct: 253 SQEDLNCIINLKARNYLLSLPHKNKVPWNRL----FPNADSKALDLLDKMLTFNPHKRIE 308
Query: 393 ATVAL 397
AL
Sbjct: 309 VEQAL 313
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 160/308 (51%), Gaps = 12/308 (3%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMA 163
E + G + + + IG+G Y V A D + VA+KK+ F++ +
Sbjct: 14 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTL 71
Query: 164 REILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
REI IL H N+I + ++ T +Y+V ME DL L + + + +
Sbjct: 72 REIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHIC 129
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSR 278
+++Q+L GL++ H+ VLHRD+K SNLL++ LKI DFGLA DP+H H +T
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEY 189
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
V T WYR PE++L + Y +D+WS GCILAE+L+ +PI PG+ ++QL+ I + GSP
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 249
Query: 339 SEEYWKKSKLPNATLFKPREPYKRCI--QETFKDFPPSSLPLIETLLAIDPAERLTATVA 396
S+E A + P+K + F + +L L++ +L +P +R+ A
Sbjct: 250 SQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 309
Query: 397 LNSEVIFQ 404
L + Q
Sbjct: 310 LAHPYLAQ 317
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 162/312 (51%), Gaps = 20/312 (6%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMA 163
E + G + + + IG+G Y V A D + VA+KK+ F++ +
Sbjct: 14 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTL 71
Query: 164 REILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
REI IL H N+I + ++ T +Y+V ME DL L + + + +
Sbjct: 72 REIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHIC 129
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSR 278
+++Q+L GL++ H+ VLHRD+K SNLL++ LKI DFGLA DP+H H +T
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 189
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
V T WYR PE++L + Y +D+WS GCILAE+L+ +PI PG+ ++QL+ I + GSP
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 249
Query: 339 SEEYWK---KSKLPNATLFKPRE---PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLT 392
S+E K N L P + P+ R F + +L L++ +L +P +R+
Sbjct: 250 SQEDLNCIINLKARNYLLSLPHKNKVPWNRL----FPNADSKALDLLDKMLTFNPHKRIE 305
Query: 393 ATVALNSEVIFQ 404
AL + Q
Sbjct: 306 VEQALAHPYLAQ 317
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 155/293 (52%), Gaps = 15/293 (5%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILR 170
+P+R + + +G G Y +V A D + VA+KK+ + RE+ +L+
Sbjct: 26 VPQR---LQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLK 82
Query: 171 RLDHPNVIKLEGLVTSRMS----CSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQL 226
L H NVI L + T S +YLV M DL + S ++ V+ ++QL
Sbjct: 83 HLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQ--ALSDEHVQFLVYQL 140
Query: 227 LSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRP 286
L GL++ H+ G++HRD+K SN+ +++D L+I DFGLA D MT V T WYR
Sbjct: 141 LRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE----MTGYVATRWYRA 196
Query: 287 PELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS 346
PE++L Y VD+WS GCI+AELL GK + PG ++QL +I ++ G+PS E K
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKI 256
Query: 347 KLPNATLFKPREP--YKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
+A + P ++ + F+ P ++ L+ +L +D +R++A AL
Sbjct: 257 SSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEAL 309
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 147/286 (51%), Gaps = 12/286 (4%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
+ + +G G Y V A D TG VA+KK+ K RE+ +L+ + H NV
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 178 IKLEGLVTSRMS----CSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + YLV +M DL L K E +++ ++Q+L GL +
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYI 144
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H G++HRD+K NL +++D LKI DFGLA D M VVT WYR PE++L
Sbjct: 145 HAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE----MXGXVVTRWYRAPEVILNW 200
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VD+WS GCI+AE++ GK + G ++QL +I K+ G+P E+ ++ + A
Sbjct: 201 MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKN 260
Query: 354 FKPREP--YKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
+ P K+ + P ++ L+E +L +D +R+TA AL
Sbjct: 261 YMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEAL 306
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 154/293 (52%), Gaps = 15/293 (5%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILR 170
+P+R + + +G G Y +V A D + VA+KK+ + RE+ +L+
Sbjct: 26 VPQR---LQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLK 82
Query: 171 RLDHPNVIKLEGLVTSRMS----CSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQL 226
L H NVI L + T S +YLV M DL + ++ V+ ++QL
Sbjct: 83 HLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQ--ALSDEHVQFLVYQL 140
Query: 227 LSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRP 286
L GL++ H+ G++HRD+K SN+ +++D L+I DFGLA D MT V T WYR
Sbjct: 141 LRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE----MTGYVATRWYRA 196
Query: 287 PELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS 346
PE++L Y VD+WS GCI+AELL GK + PG ++QL +I ++ G+PS E K
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKI 256
Query: 347 KLPNATLFKPREP--YKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
+A + P ++ + F+ P ++ L+ +L +D +R++A AL
Sbjct: 257 SSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEAL 309
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 154/293 (52%), Gaps = 15/293 (5%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILR 170
+P+R + + +G G Y +V A D + VA+KK+ + RE+ +L+
Sbjct: 18 VPQR---LQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLK 74
Query: 171 RLDHPNVIKLEGLVTSRMS----CSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQL 226
L H NVI L + T S +YLV M DL + ++ V+ ++QL
Sbjct: 75 HLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQ--ALSDEHVQFLVYQL 132
Query: 227 LSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRP 286
L GL++ H+ G++HRD+K SN+ +++D L+I DFGLA D MT V T WYR
Sbjct: 133 LRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEE----MTGYVATRWYRA 188
Query: 287 PELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS 346
PE++L Y VD+WS GCI+AELL GK + PG ++QL +I ++ G+PS E K
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKI 248
Query: 347 KLPNATLFKPREP--YKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
+A + P ++ + F+ P ++ L+ +L +D +R++A AL
Sbjct: 249 SSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEAL 301
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 153/286 (53%), Gaps = 23/286 (8%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
+ +E + +G+G+Y V K ++ TG+IVA+KK + + K REI +L++L H
Sbjct: 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHE 84
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
N++ L L + YLVF +++H L L P V+ Y+ Q+++G+ CH
Sbjct: 85 NLVNL--LEVCKKKKRWYLVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCH 141
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
++ ++HRDIK N+L+ GV+K+ DFG A + P + V T WYR PELL+G
Sbjct: 142 SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY--DDEVATRWYRAPELLVGD 199
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGS---PSEEYWKKS---- 346
YG VD+W+ GC++ E+ G+P+ PG ++++QL+ I G+ +E + K+
Sbjct: 200 VKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA 259
Query: 347 --KLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAER 390
+LP K REP +R + + L + L IDP +R
Sbjct: 260 GVRLPE---IKEREPLER----RYPKLSEVVIDLAKKCLHIDPDKR 298
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 156/299 (52%), Gaps = 20/299 (6%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMAREILILRRLD 173
+ F+ +G+G Y V A TG+IVA+KK+ FD +P REI IL+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFK 67
Query: 174 HPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGL 230
H N+I + + + +Y++ M+ DL + ++ + ++ ++ +++Q L +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQML--SDDHIQYFIYQTLRAV 125
Query: 231 EHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN---------HKHPMTSRVVT 281
+ H + V+HRD+K SNLLI+ + LK+ DFGLA D + + MT V T
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVAT 185
Query: 282 LWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP-SE 340
WYR PE++L + Y +D+WS GCILAEL +PI PGR QL I+ + G+P S+
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245
Query: 341 EYWKKSKLPNATLFKPREPYKRC--IQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
+ + P A + P +++ F P + L++ +L DPA+R+TA AL
Sbjct: 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 156/299 (52%), Gaps = 20/299 (6%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMAREILILRRLD 173
+ F+ +G+G Y V A TG+IVA+KK+ FD +P REI IL+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFK 67
Query: 174 HPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGL 230
H N+I + + + +Y++ M+ DL + ++ + ++ ++ +++Q L +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQML--SDDHIQYFIYQTLRAV 125
Query: 231 EHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN---------HKHPMTSRVVT 281
+ H + V+HRD+K SNLLI+ + LK+ DFGLA D + + MT V T
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVAT 185
Query: 282 LWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP-SE 340
WYR PE++L + Y +D+WS GCILAEL +PI PGR QL I+ + G+P S+
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245
Query: 341 EYWKKSKLPNATLFKPREPYKRC--IQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
+ + P A + P +++ F P + L++ +L DPA+R+TA AL
Sbjct: 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 29/305 (9%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + + +YLV M+ A L +++ ++ ++Q+L G++H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMD---ANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA MT VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VD+WS GCI+ E++ K + PGR ++Q +K+ + G+P E+ KK +
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 354 FKPREPYKRCIQETF-KDFPPSSLP---------------LIETLLAIDPAERLTATVAL 397
+ R Y TF K FP S P L+ +L IDPA+R++ AL
Sbjct: 260 VENRPKYAGL---TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 398 NSEVI 402
I
Sbjct: 317 QHPYI 321
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 29/305 (9%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + + +YLV M+ A L +++ ++ ++Q+L G++H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMD---ANLXQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA MT VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VD+WS GCI+ E++ K + PGR ++Q +K+ + G+P E+ KK +
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 354 FKPREPYKRCIQETF-KDFPPSSLP---------------LIETLLAIDPAERLTATVAL 397
+ R Y TF K FP S P L+ +L IDPA+R++ AL
Sbjct: 260 VENRPKYAGL---TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 398 NSEVI 402
I
Sbjct: 317 QHPYI 321
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 155/299 (51%), Gaps = 20/299 (6%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMAREILILRRLD 173
+ F+ +G+G Y V A TG+IVA+KK+ FD +P REI IL+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFK 67
Query: 174 HPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGL 230
H N+I + + + +Y++ M+ DL + ++ + ++ ++ +++Q L +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQML--SDDHIQYFIYQTLRAV 125
Query: 231 EHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN---------HKHPMTSRVVT 281
+ H + V+HRD+K SNLLI+ + LK+ DFGLA D + + M V T
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVAT 185
Query: 282 LWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP-SE 340
WYR PE++L + Y +D+WS GCILAEL +PI PGR QL I+ + G+P S+
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245
Query: 341 EYWKKSKLPNATLFKPREPYKRC--IQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
+ + P A + P +++ F P + L++ +L DPA+R+TA AL
Sbjct: 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 156/310 (50%), Gaps = 39/310 (12%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + + +YLV M+ A L +++ ++ ++Q+L G++H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMD---ANLXQVIQMELDHERMSYLLYQMLXGIKHL 142
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLA-----SFFDPNHKHPMTSRVVTLWYRPPE 288
H+ G++HRD+K SN+++ D LKI DFGLA SF MT VVT +YR PE
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFM-------MTPYVVTRYYRAPE 195
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348
++LG Y VD+WS GCI+ E++ K + PGR ++Q +K+ + G+P E+ KK +
Sbjct: 196 VILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 349 PNATLFKPREPYKRCIQETF-KDFPPSSLP---------------LIETLLAIDPAERLT 392
+ R Y TF K FP S P L+ +L IDPA+R++
Sbjct: 255 TVRNYVENRPKYAGL---TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 393 ATVALNSEVI 402
AL I
Sbjct: 312 VDDALQHPYI 321
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 156/310 (50%), Gaps = 39/310 (12%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + + +YLV M+ A L +++ ++ ++Q+L G++H
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMD---ANLXQVIQMELDHERMSYLLYQMLXGIKHL 135
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLA-----SFFDPNHKHPMTSRVVTLWYRPPE 288
H+ G++HRD+K SN+++ D LKI DFGLA SF MT VVT +YR PE
Sbjct: 136 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFM-------MTPYVVTRYYRAPE 188
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348
++LG Y VD+WS GCI+ E++ K + PGR ++Q +K+ + G+P E+ KK +
Sbjct: 189 VILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 247
Query: 349 PNATLFKPREPYKRCIQETF-KDFPPSSLP---------------LIETLLAIDPAERLT 392
+ R Y TF K FP S P L+ +L IDPA+R++
Sbjct: 248 TVRNYVENRPKYAGL---TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 304
Query: 393 ATVALNSEVI 402
AL I
Sbjct: 305 VDDALQHPYI 314
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 156/310 (50%), Gaps = 39/310 (12%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + + +YLV M+ A L +++ ++ ++Q+L G++H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMD---ANLXQVIQMELDHERMSYLLYQMLXGIKHL 142
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLA-----SFFDPNHKHPMTSRVVTLWYRPPE 288
H+ G++HRD+K SN+++ D LKI DFGLA SF MT VVT +YR PE
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFM-------MTPYVVTRYYRAPE 195
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348
++LG Y VD+WS GCI+ E++ K + PGR ++Q +K+ + G+P E+ KK +
Sbjct: 196 VILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 349 PNATLFKPREPYKRCIQETF-KDFPPSSLP---------------LIETLLAIDPAERLT 392
+ R Y TF K FP S P L+ +L IDPA+R++
Sbjct: 255 TVRNYVENRPKYAGL---TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 393 ATVALNSEVI 402
AL I
Sbjct: 312 VDDALQHPYI 321
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 29/305 (9%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + + +YLV M+ A L +++ ++ ++Q+L G++H
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMD---ANLCQVIQMELDHERMSYLLYQMLCGIKHL 180
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA MT VVT +YR PE++LG
Sbjct: 181 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 237
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VD+WS GCI+ E++ K + PGR ++Q +K+ + G+P E+ KK +
Sbjct: 238 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 297
Query: 354 FKPREPYKRCIQETF-KDFPPSSLP---------------LIETLLAIDPAERLTATVAL 397
+ R Y TF K FP S P L+ +L IDPA+R++ AL
Sbjct: 298 VENRPKYAGL---TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 354
Query: 398 NSEVI 402
I
Sbjct: 355 QHPYI 359
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 29/305 (9%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + + +YLV M+ A L +++ ++ ++Q+L G++H
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMD---ANLCQVIQMELDHERMSYLLYQMLCGIKHL 180
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA MT VVT +YR PE++LG
Sbjct: 181 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 237
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VD+WS GCI+ E++ K + PGR ++Q +K+ + G+P E+ KK +
Sbjct: 238 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 297
Query: 354 FKPREPYKRCIQETF-KDFPPSSLP---------------LIETLLAIDPAERLTATVAL 397
+ R Y TF K FP S P L+ +L IDPA+R++ AL
Sbjct: 298 VENRPKYAGL---TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 354
Query: 398 NSEVI 402
I
Sbjct: 355 QHPYI 359
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 155/302 (51%), Gaps = 23/302 (7%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + S +Y+V M+ A L+ +++ ++ ++Q+L G++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD---ANLSQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA MT VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VD+WS GCI+ E++ G + PG ++Q +K+ + G+PS E+ KK + T
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 354 FKPREPYK-RCIQETFKD--FPPSS----------LPLIETLLAIDPAERLTATVALNSE 400
+ R Y ++ F D FP S L+ +L ID ++R++ AL
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 401 VI 402
I
Sbjct: 320 YI 321
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 155/302 (51%), Gaps = 23/302 (7%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + S +Y+V M+ A L+ +++ ++ ++Q+L G++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD---ANLSQVIQMELDHERMSYLLYQMLVGIKHL 142
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA MT VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VD+WS GCI+ E++ G + PG ++Q +K+ + G+PS E+ KK + T
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 354 FKPREPYK-RCIQETFKD--FPPSS----------LPLIETLLAIDPAERLTATVALNSE 400
+ R Y ++ F D FP S L+ +L ID ++R++ AL
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 401 VI 402
I
Sbjct: 320 YI 321
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 29/305 (9%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + + +YLV M+ A L +++ ++ ++Q+L G++H
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMD---ANLCQVIQMELDHERMSYLLYQMLCGIKHL 143
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA MT VVT +YR PE++LG
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 200
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VD+WS GCI+ E++ K + PGR ++Q +K+ + G+P E+ KK +
Sbjct: 201 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 260
Query: 354 FKPREPYKRCIQETF-KDFPPSSLP---------------LIETLLAIDPAERLTATVAL 397
+ R Y TF K FP S P L+ +L IDPA+R++ AL
Sbjct: 261 VENRPKYAGL---TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 317
Query: 398 NSEVI 402
I
Sbjct: 318 QHPYI 322
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 29/305 (9%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + + +YLV M+ A L +++ ++ ++Q+L G++H
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMD---ANLCQVIQMELDHERMSYLLYQMLCGIKHL 143
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA MT VVT +YR PE++LG
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 200
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VD+WS GCI+ E++ K + PGR ++Q +K+ + G+P E+ KK +
Sbjct: 201 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 260
Query: 354 FKPREPYKRCIQETF-KDFPPSSLP---------------LIETLLAIDPAERLTATVAL 397
+ R Y TF K FP S P L+ +L IDPA+R++ AL
Sbjct: 261 VENRPKYAGL---TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 317
Query: 398 NSEVI 402
I
Sbjct: 318 QHPYI 322
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 29/305 (9%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + + +YLV M+ A L +++ ++ ++Q+L G++H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMD---ANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA MT VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VD+WS GCI+ E++ K + PGR ++Q +K+ + G+P E+ KK +
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 354 FKPREPYKRCIQETF-KDFPPSSLP---------------LIETLLAIDPAERLTATVAL 397
+ R Y TF K FP S P L+ +L IDPA+R++ AL
Sbjct: 260 VENRPKYAGL---TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 398 NSEVI 402
I
Sbjct: 317 QHPYI 321
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 29/305 (9%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 84
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + + +YLV M+ A L +++ ++ ++Q+L G++H
Sbjct: 85 ISLLNVFTPQKTLEEFQDVYLVMELMD---ANLCQVIQMELDHERMSYLLYQMLCGIKHL 141
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA MT VVT +YR PE++LG
Sbjct: 142 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 198
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VD+WS GCI+ E++ K + PGR ++Q +K+ + G+P E+ KK +
Sbjct: 199 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 258
Query: 354 FKPREPYKRCIQETF-KDFPPSSLP---------------LIETLLAIDPAERLTATVAL 397
+ R Y TF K FP S P L+ +L IDPA+R++ AL
Sbjct: 259 VENRPKYAGL---TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 315
Query: 398 NSEVI 402
I
Sbjct: 316 QHPYI 320
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 29/305 (9%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + + +YLV M+ A L +++ ++ ++Q+L G++H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMD---ANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA MT VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VD+WS GCI+ E++ K + PGR ++Q +K+ + G+P E+ KK +
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 354 FKPREPYKRCIQETF-KDFPPSSLP---------------LIETLLAIDPAERLTATVAL 397
+ R Y TF K FP S P L+ +L IDPA+R++ AL
Sbjct: 260 VENRPKYAGL---TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 398 NSEVI 402
I
Sbjct: 317 QHPYI 321
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 29/305 (9%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + + +YLV M+ A L +++ ++ ++Q+L G++H
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMD---ANLCQVIQMELDHERMSYLLYQMLCGIKHL 136
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA MT VVT +YR PE++LG
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 193
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VD+WS GCI+ E++ K + PGR ++Q +K+ + G+P E+ KK +
Sbjct: 194 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 253
Query: 354 FKPREPYKRCIQETF-KDFPPSSLP---------------LIETLLAIDPAERLTATVAL 397
+ R Y TF K FP S P L+ +L IDPA+R++ AL
Sbjct: 254 VENRPKYAGL---TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 310
Query: 398 NSEVI 402
I
Sbjct: 311 QHPYI 315
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 158/331 (47%), Gaps = 59/331 (17%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVR--FDNLEPESVKFMAREILILRRLDHPNVIKLE 181
IG+G+Y VY A D T K VA+KKV F++L K + REI IL RL +I+L
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLI--DCKRILREITILNRLKSDYIIRLY 91
Query: 182 GLVTSRMSC---SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGV 238
L+ LY+V + DL L +P + TE +K ++ LL G H +G+
Sbjct: 92 DLIIPDDLLKFDELYIVLEIADSDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIHESGI 150
Query: 239 LHRDIKGSNLLIDDDGVLKIADFGLASFFDP---------------------NHKHPMTS 277
+HRD+K +N L++ D +K+ DFGLA + N K +TS
Sbjct: 151 IHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTS 210
Query: 278 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGK-----------PIMPG----- 321
VVT WYR PEL+L +Y +D+WS GCI AELL P+ PG
Sbjct: 211 HVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFP 270
Query: 322 ------------RTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCI--QET 367
++ +QL+ I+ + G+P+E+ K P + P+++ I ++
Sbjct: 271 LSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQK 330
Query: 368 FKDFPPSSLPLIETLLAIDPAERLTATVALN 398
+ + L+E++L +P +R+T AL+
Sbjct: 331 YPSISDDGINLLESMLKFNPNKRITIDQALD 361
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 29/305 (9%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + + +YLV M+ A L +++ ++ ++Q+L G++H
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMD---ANLCQVIQMELDHERMSYLLYQMLCGIKHL 135
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA MT VVT +YR PE++LG
Sbjct: 136 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 192
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VD+WS GCI+ E++ K + PGR ++Q +K+ + G+P E+ KK +
Sbjct: 193 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 252
Query: 354 FKPREPYKRCIQETF-KDFPPSSLP---------------LIETLLAIDPAERLTATVAL 397
+ R Y TF K FP S P L+ +L IDPA+R++ AL
Sbjct: 253 VENRPKYAGL---TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 309
Query: 398 NSEVI 402
I
Sbjct: 310 QHPYI 314
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 155/302 (51%), Gaps = 23/302 (7%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + S +Y+V M+ A L+ +++ ++ ++Q+L G++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD---ANLSQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA MT VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VD+WS GCI+ E++ G + PG ++Q +K+ + G+PS E+ KK + T
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 354 FKPREPYK-RCIQETFKD--FPPSS----------LPLIETLLAIDPAERLTATVALNSE 400
+ R Y ++ F D FP S L+ +L ID ++R++ AL
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 401 VI 402
I
Sbjct: 320 YI 321
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 29/305 (9%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + + +YLV M+ A L +++ ++ ++Q+L G++H
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMD---ANLCQVIQMELDHERMSYLLYQMLCGIKHL 136
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA MT VVT +YR PE++LG
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 193
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VD+WS GCI+ E++ K + PGR ++Q +K+ + G+P E+ KK +
Sbjct: 194 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 253
Query: 354 FKPREPYKRCIQETF-KDFPPSSLP---------------LIETLLAIDPAERLTATVAL 397
+ R Y TF K FP S P L+ +L IDPA+R++ AL
Sbjct: 254 VENRPKYAGL---TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 310
Query: 398 NSEVI 402
I
Sbjct: 311 QHPYI 315
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 166/347 (47%), Gaps = 69/347 (19%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR--FDNLEPESVKFMAREILILRRLD 173
D +E IG G+Y +V +A D L ++VA+KK+ F++L K + REI IL RL+
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLI--DCKRILREIAILNRLN 110
Query: 174 HPNVIKLEGLVTSR---MSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGL 230
H +V+K+ +V + LY+V + D L +P V TE +K ++ LL G+
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTP-VYLTELHIKTLLYNLLVGV 169
Query: 231 EHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD---------------------- 268
++ H+ G+LHRD+K +N L++ D +K+ DFGLA D
Sbjct: 170 KYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVT 229
Query: 269 ----PNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA---------- 314
N K +T VVT WYR PEL+L +Y +D+WS GCI AELL
Sbjct: 230 FPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHA 289
Query: 315 -GKPIMPG--------------------RTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
P+ PG R +QL+ I+ + G+PSEE + + +A
Sbjct: 290 DRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKR 349
Query: 354 FKPREPYKRCIQETFKDFPPSS---LPLIETLLAIDPAERLTATVAL 397
+ P KR + + FP SS + L++ +L +P +R+T L
Sbjct: 350 YIRIFP-KREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECL 395
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 155/303 (51%), Gaps = 25/303 (8%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++++ IG G V A D + G VA+KK+ K RE+++L+ ++H N+
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 85
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + + +YLV M+ A L ++ ++ ++Q+L G++H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMD---ANLCQVIHMELDHERMSYLLYQMLCGIKHL 142
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA N MT VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFM--MTPYVVTRYYRAPEVILG- 199
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK--KSKLPNA 351
Y VD+WS GCI+ EL+ G I G ++Q +K+ + G+PS E+ + + N
Sbjct: 200 MGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNY 259
Query: 352 TLFKPREPYKRCIQETFKD--FPPSS----------LPLIETLLAIDPAERLTATVALNS 399
+P+ P + +E F D FP S L+ +L IDP +R++ AL
Sbjct: 260 VENRPKYPGIK-FEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRH 318
Query: 400 EVI 402
I
Sbjct: 319 PYI 321
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 155/302 (51%), Gaps = 23/302 (7%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + S +Y+V M+ A L+ +++ ++ ++Q+L G++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD---ANLSQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA MT VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VD+WS GCI+ E++ G + PG ++Q +K+ + G+PS E+ KK + T
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 354 FKPREPYK-RCIQETFKD--FPPSS----------LPLIETLLAIDPAERLTATVALNSE 400
+ R Y ++ F D FP S L+ +L ID ++R++ AL
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 401 VI 402
I
Sbjct: 320 YI 321
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 154/302 (50%), Gaps = 23/302 (7%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 90
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + S +Y+V M+ A L +++ ++ ++Q+L G++H
Sbjct: 91 IGLLNVFTPQKSLEEFQDVYIVMELMD---ANLCQVIQMELDHERMSYLLYQMLCGIKHL 147
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA MT VVT +YR PE++LG
Sbjct: 148 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 204
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VDLWS GCI+ E++ K + PGR ++Q +K+ + G+P E+ KK + T
Sbjct: 205 MGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 264
Query: 354 FKPREPYK-RCIQETFKD--FPPSS----------LPLIETLLAIDPAERLTATVALNSE 400
+ R Y ++ F D FP S L+ +L ID ++R++ AL
Sbjct: 265 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 324
Query: 401 VI 402
I
Sbjct: 325 YI 326
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 154/302 (50%), Gaps = 23/302 (7%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + S +Y+V M+ A L +++ ++ ++Q+L G++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD---ANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA MT VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VD+WS GCI+ E++ G + PG ++Q +K+ + G+PS E+ KK + T
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 354 FKPREPYK-RCIQETFKD--FPPSS----------LPLIETLLAIDPAERLTATVALNSE 400
+ R Y ++ F D FP S L+ +L ID ++R++ AL
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 401 VI 402
I
Sbjct: 320 YI 321
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 153/303 (50%), Gaps = 25/303 (8%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++++ IG G V A D + G VA+KK+ K RE+++L+ ++H N+
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 83
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + + +YLV M+ A L ++ ++ ++Q+L G++H
Sbjct: 84 ISLLNVFTPQKTLEEFQDVYLVMELMD---ANLCQVIHMELDHERMSYLLYQMLCGIKHL 140
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA N MT VVT +YR PE++LG
Sbjct: 141 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFM--MTPYVVTRYYRAPEVILG- 197
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK--KSKLPNA 351
Y VD+WS GCI+ EL+ G I G ++Q +K+ + G+PS E+ + + N
Sbjct: 198 MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNY 257
Query: 352 TLFKPREPYKRCIQETFKD--FPPSS----------LPLIETLLAIDPAERLTATVALNS 399
+P P +E F D FP S L+ +L IDP +R++ AL
Sbjct: 258 VENRPAYP-GIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRH 316
Query: 400 EVI 402
I
Sbjct: 317 PYI 319
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 154/302 (50%), Gaps = 23/302 (7%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + S +Y+V M+ A L +++ ++ ++Q+L G++H
Sbjct: 80 IGLLNVFTPQKSLEEFQDVYIVMELMD---ANLCQVIQMELDHERMSYLLYQMLCGIKHL 136
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA MT VVT +YR PE++LG
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 193
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VDLWS GCI+ E++ K + PGR ++Q +K+ + G+P E+ KK + T
Sbjct: 194 MGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 253
Query: 354 FKPREPYK-RCIQETFKD--FPPSS----------LPLIETLLAIDPAERLTATVALNSE 400
+ R Y ++ F D FP S L+ +L ID ++R++ AL
Sbjct: 254 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 313
Query: 401 VI 402
I
Sbjct: 314 YI 315
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 156/307 (50%), Gaps = 33/307 (10%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + S +Y+V M+ A L+ +++ ++ ++Q+L G++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD---ANLSQVIQMELDHERMSYLLYQMLVGIKHL 142
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLA-----SFFDPNHKHPMTSRVVTLWYRPPE 288
H+ G++HRD+K SN+++ D LKI DFGLA SF MT VVT +YR PE
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFM-------MTPYVVTRYYRAPE 195
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKL 348
++LG Y VD+WS G I+ E++ G + PG ++Q +K+ + G+PS E+ KK +
Sbjct: 196 VILG-MGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 349 PNATLFKPREPYK-RCIQETFKD--FPPSS----------LPLIETLLAIDPAERLTATV 395
T + R Y ++ F D FP S L+ +L ID ++R++
Sbjct: 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314
Query: 396 ALNSEVI 402
AL I
Sbjct: 315 ALQHPYI 321
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 154/302 (50%), Gaps = 23/302 (7%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + S +Y+V M+ A L+ +++ ++ ++Q+L G++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD---ANLSQVIQMELDHERMSYLLYQMLVGIKHL 142
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA MT VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VD+WS G I+ E++ G + PG ++Q +K+ + G+PS E+ KK + T
Sbjct: 200 MGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 354 FKPREPYK-RCIQETFKD--FPPSS----------LPLIETLLAIDPAERLTATVALNSE 400
+ R Y ++ F D FP S L+ +L ID ++R++ AL
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 401 VI 402
I
Sbjct: 320 YI 321
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 153/302 (50%), Gaps = 23/302 (7%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + S +Y+V M+ A L +++ ++ ++Q+L G++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD---ANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA MT VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPEVVTRYYRAPEVILG- 199
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VD+WS GCI+ E++ G + PG ++Q +K+ + G+P E+ KK + T
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 259
Query: 354 FKPREPYK-RCIQETFKD--FPPSS----------LPLIETLLAIDPAERLTATVALNSE 400
+ R Y ++ F D FP S L+ +L ID ++R++ AL
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 401 VI 402
I
Sbjct: 320 YI 321
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 153/302 (50%), Gaps = 23/302 (7%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + S +Y+V M+ A L +++ ++ ++Q+L G++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD---ANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA M VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRYYRAPEVILG- 199
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VDLWS GCI+ E++ K + PGR ++Q +K+ + G+P E+ KK + T
Sbjct: 200 MGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 259
Query: 354 FKPREPYK-RCIQETFKD--FPPSS----------LPLIETLLAIDPAERLTATVALNSE 400
+ R Y ++ F D FP S L+ +L ID ++R++ AL
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 401 VI 402
I
Sbjct: 320 YI 321
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 153/302 (50%), Gaps = 23/302 (7%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + S +Y+V M+ A L +++ ++ ++Q+L G++H
Sbjct: 87 IGLLNVFTPQKSLEEFQDVYIVMELMD---ANLCQVIQMELDHERMSYLLYQMLCGIKHL 143
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA MT VVT +YR PE++LG
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 200
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VD+WS GCI+ E++ G + PG ++Q +K+ + G+P E+ KK + T
Sbjct: 201 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 260
Query: 354 FKPREPYK-RCIQETFKD--FPPSS----------LPLIETLLAIDPAERLTATVALNSE 400
+ R Y ++ F D FP S L+ +L ID ++R++ AL
Sbjct: 261 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320
Query: 401 VI 402
I
Sbjct: 321 YI 322
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 153/302 (50%), Gaps = 23/302 (7%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + S +Y+V M+ A L +++ ++ ++Q+L G++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD---ANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA MT VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VD+WS GCI+ E++ G + PG ++Q +K+ + G+P E+ KK + T
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 259
Query: 354 FKPREPYK-RCIQETFKD--FPPSS----------LPLIETLLAIDPAERLTATVALNSE 400
+ R Y ++ F D FP S L+ +L ID ++R++ AL
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 401 VI 402
I
Sbjct: 320 YI 321
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 152/302 (50%), Gaps = 23/302 (7%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 87
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + S +Y+V M+ A L +++ ++ ++Q+L G++H
Sbjct: 88 IGLLNVFTPQKSLEEFQDVYIVMELMD---ANLCQVIQMELDHERMSYLLYQMLCGIKHL 144
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA M VVT +YR PE++LG
Sbjct: 145 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMVPFVVTRYYRAPEVILG- 201
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VD+WS GCI+ E++ G + PG ++Q +K+ + G+P E+ KK + T
Sbjct: 202 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 261
Query: 354 FKPREPYK-RCIQETFKD--FPPSS----------LPLIETLLAIDPAERLTATVALNSE 400
+ R Y ++ F D FP S L+ +L ID ++R++ AL
Sbjct: 262 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 321
Query: 401 VI 402
I
Sbjct: 322 YI 323
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 158/343 (46%), Gaps = 66/343 (19%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR--FDNLEPESVKFMAREILILRRLD 173
D++E IG+G+Y VY A D K VA+KKV F++L K + REI IL RL
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLI--DCKRILREITILNRLK 85
Query: 174 HPNVIKLEGLVTSRMSCS---LYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGL 230
+I+L L+ LY+V + DL L +P + TE VK ++ LL G
Sbjct: 86 SDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTP-IFLTEQHVKTILYNLLLGE 144
Query: 231 EHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDP--------------------- 269
+ H +G++HRD+K +N L++ D +KI DFGLA +
Sbjct: 145 KFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGP 204
Query: 270 ---NHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGK---------- 316
N K +TS VVT WYR PEL+L +Y +D+WS GCI AELL
Sbjct: 205 HNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNR 264
Query: 317 -PIMPG-----------------RTEVEQLHKIYKLCGSPSEE----YWKKSKLPNATLF 354
P+ PG ++ +QL+ I+ + G+P EE K+ + LF
Sbjct: 265 FPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLF 324
Query: 355 KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
R+ + + + + L+E++L + +R+T AL
Sbjct: 325 PTRDGID--LSKKYSSISKEGIDLLESMLRFNAQKRITIDKAL 365
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 151/302 (50%), Gaps = 23/302 (7%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ + IG G V A D + + VA+KK+ K RE+++++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 178 IKLEGLVTSRMSC----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
I L + T + S +Y+V M+ A L +++ ++ ++Q+L G++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD---ANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G++HRD+K SN+++ D LKI DFGLA M VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRYYRAPEVILG- 199
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VD+WS GCI+ E++ K + PGR ++Q +K+ + G+P + KK +
Sbjct: 200 MGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNY 259
Query: 354 FKPREPYK-RCIQETFKD--FPPSS----------LPLIETLLAIDPAERLTATVALNSE 400
+ R Y ++ F D FP S L+ +L ID ++R++ AL
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 401 VI 402
I
Sbjct: 320 YI 321
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 157/300 (52%), Gaps = 23/300 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DH 174
D ++ + K+G+G YS V++A ++ + V +K L+P + REI IL L
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKI-----LKPVKKNKIKREIKILENLRGG 91
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN+I L +V +S + LVF ++ + D L + T+ ++ YM+++L L++C
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYC 147
Query: 234 HNNGVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
H+ G++HRD+K N++ID + L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV--RVASRYFKGPELLVD 205
Query: 293 ATDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPS-EEYWKKSKLPN 350
Y +D+WS GC+LA ++ K P G +QL +I K+ G+ +Y K +
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL 265
Query: 351 ATLFK------PREPYKRCIQ-ETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIF 403
F R+ ++R + E P +L ++ LL D RLTA A+ +
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 125/247 (50%), Gaps = 22/247 (8%)
Query: 113 RRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL 172
+ D F+ GQGT+ V K+ TG VA+KKV D +F RE+ I++ L
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP------RFRNRELQIMQDL 73
Query: 173 ---DHPNVIKLEGLVTS-----RMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQ---VKC 221
HPN+++L+ + R L +V Y+ L + + P +K
Sbjct: 74 AVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKV 133
Query: 222 YMHQLLS--GLEHCHNNGVLHRDIKGSNLLIDD-DGVLKIADFGLASFFDPNHKHPMTSR 278
++ QL+ G H + V HRDIK N+L+++ DG LK+ DFG A P+ P +
Sbjct: 134 FLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE--PNVAY 191
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
+ + +YR PEL+ G Y VD+WS GCI AE++ G+PI G QLH+I ++ G P
Sbjct: 192 ICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCP 251
Query: 339 SEEYWKK 345
S E +K
Sbjct: 252 SREVLRK 258
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 141/301 (46%), Gaps = 42/301 (13%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKV-------RFDNLEPESV--KFMAREILILRRLDH 174
I G+Y V D G VA+K+V R N+ +S K + REI +L H
Sbjct: 30 ISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 175 PNVIKLEGLVTSRMSCS---LYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
PN++ L + + LYLV M DLA + + + ++ +M+ +L GL
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLH 148
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA--SFFDPNHKHPMTSRVVTLWYRPPEL 289
H GV+HRD+ N+L+ D+ + I DF LA D N H +T R WYR PEL
Sbjct: 149 VLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR----WYRAPEL 204
Query: 290 LLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLP 349
++ + VD+WSAGC++AE+ K + G T QL+KI ++ G+P K+
Sbjct: 205 VMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTP--------KIE 256
Query: 350 NATLFKPREPYKR-CIQETFKDFP------------PSSLPLIETLLAIDPAERLTATVA 396
+ +F P R ++ + + P P +L LI +L +P R++ A
Sbjct: 257 DVVMFS--SPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQA 314
Query: 397 L 397
L
Sbjct: 315 L 315
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 141/301 (46%), Gaps = 42/301 (13%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKV-------RFDNLEPESV--KFMAREILILRRLDH 174
I G+Y V D G VA+K+V R N+ +S K + REI +L H
Sbjct: 30 ISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 175 PNVIKLEGLVTSRMSCS---LYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
PN++ L + + LYLV M DLA + + + ++ +M+ +L GL
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLH 148
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA--SFFDPNHKHPMTSRVVTLWYRPPEL 289
H GV+HRD+ N+L+ D+ + I DF LA D N H +T R WYR PEL
Sbjct: 149 VLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR----WYRAPEL 204
Query: 290 LLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLP 349
++ + VD+WSAGC++AE+ K + G T QL+KI ++ G+P K+
Sbjct: 205 VMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTP--------KIE 256
Query: 350 NATLFKPREPYKR-CIQETFKDFP------------PSSLPLIETLLAIDPAERLTATVA 396
+ +F P R ++ + + P P +L LI +L +P R++ A
Sbjct: 257 DVVMFS--SPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQA 314
Query: 397 L 397
L
Sbjct: 315 L 315
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 154/299 (51%), Gaps = 21/299 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D ++ + K+G+G YS V++A ++ + VA+K ++ + + E L P
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILENL----RGGP 92
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
N+I L +V +S + LVF ++ + D L + T+ ++ YM+++L L++CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH 148
Query: 235 NNGVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
+ G++HRD+K N+LID + L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNV--RVASRYFKGPELLVDY 206
Query: 294 TDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPS-EEYWKKSKLPNA 351
Y +D+WS GC+LA ++ K P G +QL +I K+ G+ +Y K +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 352 TLFK------PREPYKRCIQ-ETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIF 403
F R+ ++R + E P +L ++ LL D RLTA A+ +
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 124/258 (48%), Gaps = 48/258 (18%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL--- 180
+G G++ V + D+ +GK ALKKV D ++ RE+ I++ LDH N+IKL
Sbjct: 15 LGTGSFGIVCEVFDIESGKRFALKKVLQD------PRYKNRELDIMKVLDHVNIIKLVDY 68
Query: 181 ---------------------------------EGLVTSRMSCSLYLVFHYMEHDLAGLA 207
+V + L ++ Y+ L +
Sbjct: 69 FYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVL 128
Query: 208 AS---PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD-DGVLKIADFGL 263
S + Y++QL + H+ G+ HRDIK NLL++ D LK+ DFG
Sbjct: 129 KSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGS 188
Query: 264 ASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRT 323
A P+ P + + + +YR PEL+LGAT+Y +DLWS GC+ EL+ GKP+ G T
Sbjct: 189 AKKLIPSE--PSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGET 246
Query: 324 EVEQLHKIYKLCGSPSEE 341
++QL +I ++ G+P++E
Sbjct: 247 SIDQLVRIIQIMGTPTKE 264
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 157/304 (51%), Gaps = 23/304 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH- 174
D +E + K+G+G YS V++ ++ + K L+P K + REI IL+ L
Sbjct: 52 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 106
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL +V + S + L+F Y+ + D L + T+ ++ Y+++LL L++C
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYC 162
Query: 234 HNNGVLHRDIKGSNLLIDDD-GVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
H+ G++HRD+K N++ID + L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 163 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV--RVASRYFKGPELLVD 220
Query: 293 ATDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPS-EEYWKKSKL-- 348
DY +D+WS GC+ A ++ K P G +QL KI K+ G+ Y K ++
Sbjct: 221 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIEL 280
Query: 349 -PNATLFKPREPYKRCIQETFKD----FPPSSLPLIETLLAIDPAERLTATVALNSEVIF 403
P R K ++ D P ++ ++ LL D ERLTA A+
Sbjct: 281 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 340
Query: 404 QDRT 407
Q R
Sbjct: 341 QVRA 344
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 134/268 (50%), Gaps = 26/268 (9%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR----FDNLEPESVKFMAREILILR 170
A +E + IG+G++ V KA D + VALK VR F E ++ + LR
Sbjct: 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEH----LR 151
Query: 171 RLDHPNVIK----LEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVK-FTEPQVKCYMHQ 225
+ D N + LE C + F + +L L + + F+ P V+ + H
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHIC---MTFELLSMNLYELIKKNKFQGFSLPLVRKFAHS 208
Query: 226 LLSGLEHCHNNGVLHRDIKGSNLLIDDDGV--LKIADFGLASFFDPNHKHPMTSRVVTLW 283
+L L+ H N ++H D+K N+L+ G +K+ DFG + + H+ T + + +
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY---EHQRVYTX-IQSRF 264
Query: 284 YRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYW 343
YR PE++LGA YG+ +D+WS GCILAELL G P++PG E +QL + +L G PS++
Sbjct: 265 YRAPEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLL 323
Query: 344 KKSKLPNATLFKPREPYKR-CIQETFKD 370
SK A F + Y R C T D
Sbjct: 324 DASK--RAKNFVSXKGYPRYCTVTTLSD 349
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 134/268 (50%), Gaps = 26/268 (9%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR----FDNLEPESVKFMAREILILR 170
A +E + IG+G++ V KA D + VALK VR F E ++ + LR
Sbjct: 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEH----LR 151
Query: 171 RLDHPNVIK----LEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVK-FTEPQVKCYMHQ 225
+ D N + LE C + F + +L L + + F+ P V+ + H
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHIC---MTFELLSMNLYELIKKNKFQGFSLPLVRKFAHS 208
Query: 226 LLSGLEHCHNNGVLHRDIKGSNLLIDDDGV--LKIADFGLASFFDPNHKHPMTSRVVTLW 283
+L L+ H N ++H D+K N+L+ G +K+ DFG + + H+ T + + +
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY---EHQRVYTX-IQSRF 264
Query: 284 YRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYW 343
YR PE++LGA YG+ +D+WS GCILAELL G P++PG E +QL + +L G PS++
Sbjct: 265 YRAPEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLL 323
Query: 344 KKSKLPNATLFKPREPYKR-CIQETFKD 370
SK A F + Y R C T D
Sbjct: 324 DASK--RAKNFVSXKGYPRYCTVTTLSD 349
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 136/286 (47%), Gaps = 34/286 (11%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH 174
++ ++++ K+G G Y V +D +T A+K +R ++ S + E+ +L+ LDH
Sbjct: 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN++KL + + YLV + +KF E + Q+LSG+ + H
Sbjct: 96 PNIMKLYDFFEDKR--NYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLH 153
Query: 235 NNGVLHRDIKGSNLLIDD---DGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLL 291
+ ++HRD+K NLL++ D ++KI DFGL++ F+ K M R+ T +Y PE+L
Sbjct: 154 KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK--MKERLGTAYYIAPEVL- 210
Query: 292 GATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351
Y D+WS G IL LLAG P G+T+ E L K+ K + WK
Sbjct: 211 -RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKN------ 263
Query: 352 TLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
+ E KD LI+ +L D R++A AL
Sbjct: 264 ------------VSEGAKD-------LIKQMLQFDSQRRISAQQAL 290
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 157/304 (51%), Gaps = 23/304 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DH 174
D +E + K+G+G YS V++ ++ + K L+P K + REI IL+ L
Sbjct: 33 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLCGG 87
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL +V + S + L+F Y+ + D L + T+ ++ Y+++LL L++C
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYC 143
Query: 234 HNNGVLHRDIKGSNLLIDDD-GVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
H+ G++HRD+K N++ID + L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 144 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV--RVASRYFKGPELLVD 201
Query: 293 ATDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPS-EEYWKKSKL-- 348
DY +D+WS GC+ A ++ K P G +QL KI K+ G+ Y K ++
Sbjct: 202 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIEL 261
Query: 349 -PNATLFKPREPYKRCIQETFKD----FPPSSLPLIETLLAIDPAERLTATVALNSEVIF 403
P R K ++ D P ++ ++ LL D ERLTA A+
Sbjct: 262 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 321
Query: 404 QDRT 407
Q R
Sbjct: 322 QVRA 325
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 157/304 (51%), Gaps = 23/304 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH- 174
D +E + K+G+G YS V++ ++ + K L+P K + REI IL+ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL +V + S + L+F Y+ + D L + T+ ++ Y+++LL L++C
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYC 141
Query: 234 HNNGVLHRDIKGSNLLIDDD-GVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
H+ G++HRD+K N++ID + L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV--RVASRYFKGPELLVD 199
Query: 293 ATDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPS-EEYWKKSKL-- 348
DY +D+WS GC+ A ++ K P G +QL KI K+ G+ Y K ++
Sbjct: 200 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIEL 259
Query: 349 -PNATLFKPREPYKRCIQETFKD----FPPSSLPLIETLLAIDPAERLTATVALNSEVIF 403
P R K ++ D P ++ ++ LL D ERLTA A+
Sbjct: 260 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 319
Query: 404 QDRT 407
Q R
Sbjct: 320 QVRA 323
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 157/304 (51%), Gaps = 23/304 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH- 174
D +E + K+G+G YS V++ ++ + K L+P K + REI IL+ L
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 86
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL +V + S + L+F Y+ + D L + T+ ++ Y+++LL L++C
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYC 142
Query: 234 HNNGVLHRDIKGSNLLIDDD-GVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
H+ G++HRD+K N++ID + L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 143 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV--RVASRYFKGPELLVD 200
Query: 293 ATDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPS-EEYWKKSKL-- 348
DY +D+WS GC+ A ++ K P G +QL KI K+ G+ Y K ++
Sbjct: 201 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIEL 260
Query: 349 -PNATLFKPREPYKRCIQETFKD----FPPSSLPLIETLLAIDPAERLTATVALNSEVIF 403
P R K ++ D P ++ ++ LL D ERLTA A+
Sbjct: 261 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 320
Query: 404 QDRT 407
Q R
Sbjct: 321 QVRA 324
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 157/304 (51%), Gaps = 23/304 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DH 174
D +E + K+G+G YS V++ ++ + K L+P K + REI IL+ L
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLCGG 86
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL +V + S + L+F Y+ + D L + T+ ++ Y+++LL L++C
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYC 142
Query: 234 HNNGVLHRDIKGSNLLIDDD-GVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
H+ G++HRD+K N++ID + L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 143 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV--RVASRYFKGPELLVD 200
Query: 293 ATDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPS-EEYWKKSKL-- 348
DY +D+WS GC+ A ++ K P G +QL KI K+ G+ Y K ++
Sbjct: 201 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIEL 260
Query: 349 -PNATLFKPREPYKRCIQETFKD----FPPSSLPLIETLLAIDPAERLTATVALNSEVIF 403
P R K ++ D P ++ ++ LL D ERLTA A+
Sbjct: 261 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 320
Query: 404 QDRT 407
Q R
Sbjct: 321 QVRA 324
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 153/303 (50%), Gaps = 21/303 (6%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D +E + K+G+G YS V++ ++ + +K ++ + + + L + P
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNL----MGGP 86
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
N++KL +V + S + L+F Y+ + D L + T+ ++ Y+++LL L++CH
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYCH 142
Query: 235 NNGVLHRDIKGSNLLIDDD-GVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
+ G++HRD+K N++ID + L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV--RVASRYFKGPELLVDL 200
Query: 294 TDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPS-EEYWKKSKL--- 348
DY +D+WS GC+ A ++ K P G +QL KI K+ G+ Y K ++
Sbjct: 201 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD 260
Query: 349 PNATLFKPREPYKRCIQETFKD----FPPSSLPLIETLLAIDPAERLTATVALNSEVIFQ 404
P R K ++ D P ++ ++ LL D ERLTA A+ Q
Sbjct: 261 PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
Query: 405 DRT 407
R
Sbjct: 321 VRA 323
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 141/295 (47%), Gaps = 35/295 (11%)
Query: 108 NGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVK-FMAREI 166
N + +D ++++ K+G G Y V KD LTG A+K ++ ++ S + E+
Sbjct: 13 NLYFQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEV 72
Query: 167 LILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQL 226
+L++LDHPN++KL + + YLV KF+E M Q+
Sbjct: 73 AVLKQLDHPNIMKLYEFFEDKRN--YYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQV 130
Query: 227 LSGLEHCHNNGVLHRDIKGSNLLIDD---DGVLKIADFGLASFFDPNHKHPMTSRVVTLW 283
LSG + H + ++HRD+K NLL++ D ++KI DFGL++ F+ K M R+ T +
Sbjct: 131 LSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--MKERLGTAY 188
Query: 284 YRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYW 343
Y PE+L Y D+WS G IL LL G P G+T+ E L ++
Sbjct: 189 YIAPEVL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV------------ 234
Query: 344 KKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398
+K K F P + + + L++ +L +P++R++A ALN
Sbjct: 235 EKGKFS----FDPPD---------WTQVSDEAKQLVKLMLTYEPSKRISAEEALN 276
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 157/304 (51%), Gaps = 23/304 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH- 174
D +E + K+G+G YS V++ ++ + K L+P K + REI IL+ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL +V + S + L+F Y+ + D L + T+ ++ Y+++LL L++C
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYC 141
Query: 234 HNNGVLHRDIKGSNLLIDDD-GVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
H+ G++HRD+K N++ID + L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV--RVASRYFKGPELLVD 199
Query: 293 ATDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPS-EEYWKKSKL-- 348
DY +D+WS GC+ A ++ K P G +QL KI K+ G+ Y K ++
Sbjct: 200 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIEL 259
Query: 349 -PNATLFKPREPYKRCIQETFKD----FPPSSLPLIETLLAIDPAERLTATVALNSEVIF 403
P R K ++ D P ++ ++ LL D ERLTA A+
Sbjct: 260 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 319
Query: 404 QDRT 407
Q R
Sbjct: 320 QVRA 323
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 157/304 (51%), Gaps = 23/304 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH- 174
D +E + K+G+G YS V++ ++ + K L+P K + REI IL+ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL +V + S + L+F Y+ + D L + T+ ++ Y+++LL L++C
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYC 141
Query: 234 HNNGVLHRDIKGSNLLIDDD-GVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
H+ G++HRD+K N++ID + L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV--RVASRYFKGPELLVD 199
Query: 293 ATDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPS-EEYWKKSKL-- 348
DY +D+WS GC+ A ++ K P G +QL KI K+ G+ Y K ++
Sbjct: 200 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIEL 259
Query: 349 -PNATLFKPREPYKRCIQETFKD----FPPSSLPLIETLLAIDPAERLTATVALNSEVIF 403
P R K ++ D P ++ ++ LL D ERLTA A+
Sbjct: 260 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 319
Query: 404 QDRT 407
Q R
Sbjct: 320 QVRA 323
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 157/304 (51%), Gaps = 23/304 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DH 174
D +E + K+G+G YS V++ ++ + K L+P K + REI IL+ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLCGG 85
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL +V + S + L+F Y+ + D L + T+ ++ Y+++LL L++C
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYC 141
Query: 234 HNNGVLHRDIKGSNLLIDDD-GVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
H+ G++HRD+K N++ID + L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV--RVASRYFKGPELLVD 199
Query: 293 ATDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPS-EEYWKKSKL-- 348
DY +D+WS GC+ A ++ K P G +QL KI K+ G+ Y K ++
Sbjct: 200 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIEL 259
Query: 349 -PNATLFKPREPYKRCIQETFKD----FPPSSLPLIETLLAIDPAERLTATVALNSEVIF 403
P R K ++ D P ++ ++ LL D ERLTA A+
Sbjct: 260 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 319
Query: 404 QDRT 407
Q R
Sbjct: 320 QVRA 323
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 159/304 (52%), Gaps = 23/304 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL-DH 174
D +E + K+G+G YS V++ ++ + K L+P K + REI IL+ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLCGG 85
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
PN++KL +V + S + L+F Y+ + D L + T+ ++ Y+++LL L++C
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYC 141
Query: 234 HNNGVLHRDIKGSNLLIDDD-GVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
H+ G++HRD+K N++ID + L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV--RVASRYFKGPELLVD 199
Query: 293 ATDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPS-EEYWKKSKL-- 348
DY +D+WS GC+ A ++ K P G +QL KI K+ G+ Y K ++
Sbjct: 200 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIEL 259
Query: 349 -PNATLF---KPREPYKRCIQETFKDF-PPSSLPLIETLLAIDPAERLTATVALNSEVIF 403
P R+P+ + + + P ++ ++ LL D ERLTA A+
Sbjct: 260 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 319
Query: 404 QDRT 407
Q R
Sbjct: 320 QVRA 323
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 139/288 (48%), Gaps = 35/288 (12%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVK-FMAREILILRRLD 173
+D ++++ K+G G Y V KD LTG A+K ++ ++ S + E+ +L++LD
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
HPN++KL + + YLV KF+E M Q+LSG +
Sbjct: 63 HPNIMKLYEFFEDKRN--YYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYL 120
Query: 234 HNNGVLHRDIKGSNLLIDD---DGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELL 290
H + ++HRD+K NLL++ D ++KI DFGL++ F+ K M R+ T +Y PE+L
Sbjct: 121 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--MKERLGTAYYIAPEVL 178
Query: 291 LGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350
Y D+WS G IL LL G P G+T+ E L ++ +K K
Sbjct: 179 --RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV------------EKGKFS- 223
Query: 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398
F P + + + L++ +L +P++R++A ALN
Sbjct: 224 ---FDPPD---------WTQVSDEAKQLVKLMLTYEPSKRISAEEALN 259
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 108/192 (56%), Gaps = 4/192 (2%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGL 183
IG+G ++ V A+ +LTG+ VA+K + L P S++ + RE+ I++ L+HPN++KL +
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 184 VTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDI 243
+ + + LYLV Y + E + + Q++S +++CH ++HRD+
Sbjct: 83 IETEKT--LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDL 140
Query: 244 KGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLW 303
K NLL+D D +KIADFG ++ F +K + + + Y PEL G G VD+W
Sbjct: 141 KAENLLLDGDMNIKIADFGFSNEFTVGNK--LDTFCGSPPYAAPELFQGKKYDGPEVDVW 198
Query: 304 SAGCILAELLAG 315
S G IL L++G
Sbjct: 199 SLGVILYTLVSG 210
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 153/299 (51%), Gaps = 21/299 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D ++ + K+G+G YS V++A ++ + V +K ++ + + E L P
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENL----RGGP 92
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
N+I L +V +S + LVF ++ + D L + T+ ++ YM+++L L++CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH 148
Query: 235 NNGVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
+ G++HRD+K N++ID + L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV--RVASRYFKGPELLVDY 206
Query: 294 TDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPS-EEYWKKSKLPNA 351
Y +D+WS GC+LA ++ K P G +QL +I K+ G+ +Y K +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 352 TLFK------PREPYKRCIQ-ETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIF 403
F R+ ++R + E P +L ++ LL D RLTA A+ +
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 153/299 (51%), Gaps = 21/299 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D ++ + K+G+G YS V++A ++ + V +K ++ + + E L P
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENL----RGGP 92
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
N+I L +V +S + LVF ++ + D L + T+ ++ YM+++L L++CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH 148
Query: 235 NNGVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
+ G++HRD+K N++ID + L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV--RVASRYFKGPELLVDY 206
Query: 294 TDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPS-EEYWKKSKLPNA 351
Y +D+WS GC+LA ++ K P G +QL +I K+ G+ +Y K +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 352 TLFK------PREPYKRCIQ-ETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIF 403
F R+ ++R + E P +L ++ LL D RLTA A+ +
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 153/299 (51%), Gaps = 21/299 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D ++ + K+G+G YS V++A ++ + V +K ++ + + E L P
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENL----RGGP 91
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
N+I L +V +S + LVF ++ + D L + T+ ++ YM+++L L++CH
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH 147
Query: 235 NNGVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
+ G++HRD+K N++ID + L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV--RVASRYFKGPELLVDY 205
Query: 294 TDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPS-EEYWKKSKLPNA 351
Y +D+WS GC+LA ++ K P G +QL +I K+ G+ +Y K +
Sbjct: 206 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 265
Query: 352 TLFK------PREPYKRCIQ-ETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIF 403
F R+ ++R + E P +L ++ LL D RLTA A+ +
Sbjct: 266 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 324
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 153/299 (51%), Gaps = 21/299 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D ++ + K+G+G YS V++A ++ + V +K ++ + + E L P
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENL----RGGP 92
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
N+I L +V +S + LVF ++ + D L + T+ ++ YM+++L L++CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLRQT----LTDYDIRFYMYEILKALDYCH 148
Query: 235 NNGVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
+ G++HRD+K N++ID + L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV--RVASRYFKGPELLVDY 206
Query: 294 TDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPS-EEYWKKSKLPNA 351
Y +D+WS GC+LA ++ K P G +QL +I K+ G+ +Y K +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 352 TLFK------PREPYKRCIQ-ETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIF 403
F R+ ++R + E P +L ++ LL D RLTA A+ +
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 153/299 (51%), Gaps = 21/299 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D ++ + K+G+G YS V++A ++ + V +K ++ + + E L P
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENL----RGGP 92
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
N+I L +V +S + LVF ++ + D L + T+ ++ YM+++L L++CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH 148
Query: 235 NNGVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
+ G++HRD+K N++ID + L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV--RVASRYFKGPELLVDY 206
Query: 294 TDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPS-EEYWKKSKLPNA 351
Y +D+WS GC+LA ++ K P G +QL +I K+ G+ +Y K +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 352 TLFK------PREPYKRCIQ-ETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIF 403
F R+ ++R + E P +L ++ LL D RLTA A+ +
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 153/299 (51%), Gaps = 21/299 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D ++ + K+G+G YS V++A ++ + V +K ++ + + E L P
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENL----RGGP 92
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
N+I L +V +S + LVF ++ + D L + T+ ++ YM+++L L++CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH 148
Query: 235 NNGVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
+ G++HRD+K N++ID + L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV--RVASRYFKGPELLVDY 206
Query: 294 TDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPS-EEYWKKSKLPNA 351
Y +D+WS GC+LA ++ K P G +QL +I K+ G+ +Y K +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 352 TLFK------PREPYKRCIQ-ETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIF 403
F R+ ++R + E P +L ++ LL D RLTA A+ +
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 153/299 (51%), Gaps = 21/299 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D ++ + K+G+G YS V++A ++ + V +K ++ + + E L P
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENL----RGGP 92
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
N+I L +V +S + LVF ++ + D L + T+ ++ YM+++L L++CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH 148
Query: 235 NNGVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
+ G++HRD+K N++ID + L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV--RVASRYFKGPELLVDY 206
Query: 294 TDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPS-EEYWKKSKLPNA 351
Y +D+WS GC+LA ++ K P G +QL +I K+ G+ +Y K +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 352 TLFK------PREPYKRCIQ-ETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIF 403
F R+ ++R + E P +L ++ LL D RLTA A+ +
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 153/299 (51%), Gaps = 21/299 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D ++ + K+G+G YS V++A ++ + V +K ++ + + E L P
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENL----RGGP 92
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
N+I L +V +S + LVF ++ + D L + T+ ++ YM+++L L++CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH 148
Query: 235 NNGVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
+ G++HRD+K N++ID + L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV--RVASRYFKGPELLVDY 206
Query: 294 TDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPS-EEYWKKSKLPNA 351
Y +D+WS GC+LA ++ K P G +QL +I K+ G+ +Y K +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 352 TLFK------PREPYKRCIQ-ETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIF 403
F R+ ++R + E P +L ++ LL D RLTA A+ +
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 153/299 (51%), Gaps = 21/299 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D ++ + K+G+G YS V++A ++ + V +K ++ + + E L P
Sbjct: 42 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENL----RGGP 97
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
N+I L +V +S + LVF ++ + D L + T+ ++ YM+++L L++CH
Sbjct: 98 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH 153
Query: 235 NNGVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
+ G++HRD+K N++ID + L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 154 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV--RVASRYFKGPELLVDY 211
Query: 294 TDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPS-EEYWKKSKLPNA 351
Y +D+WS GC+LA ++ K P G +QL +I K+ G+ +Y K +
Sbjct: 212 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 271
Query: 352 TLFK------PREPYKRCIQ-ETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIF 403
F R+ ++R + E P +L ++ LL D RLTA A+ +
Sbjct: 272 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 330
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 153/299 (51%), Gaps = 21/299 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D ++ + K+G+G YS V++A ++ + V +K ++ + + E L P
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENL----RGGP 92
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
N+I L +V +S + LVF ++ + D L + T+ ++ YM+++L L++CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH 148
Query: 235 NNGVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
+ G++HRD+K N++ID + L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV--RVASRYFKGPELLVDY 206
Query: 294 TDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPS-EEYWKKSKLPNA 351
Y +D+WS GC+LA ++ K P G +QL +I K+ G+ +Y K +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 352 TLFK------PREPYKRCIQ-ETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIF 403
F R+ ++R + E P +L ++ LL D RLTA A+ +
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 153/299 (51%), Gaps = 21/299 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D ++ + K+G+G YS V++A ++ + V +K ++ + + E L P
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENL----RGGP 91
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
N+I L +V +S + LVF ++ + D L + T+ ++ YM+++L L++CH
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH 147
Query: 235 NNGVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
+ G++HRD+K N++ID + L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV--RVASRYFKGPELLVDY 205
Query: 294 TDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPS-EEYWKKSKLPNA 351
Y +D+WS GC+LA ++ K P G +QL +I K+ G+ +Y K +
Sbjct: 206 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 265
Query: 352 TLFK------PREPYKRCIQ-ETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIF 403
F R+ ++R + E P +L ++ LL D RLTA A+ +
Sbjct: 266 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 153/299 (51%), Gaps = 21/299 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D ++ + K+G+G YS V++A ++ + V +K ++ + + E L P
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENL----RGGP 90
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
N+I L +V +S + LVF ++ + D L + T+ ++ YM+++L L++CH
Sbjct: 91 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH 146
Query: 235 NNGVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
+ G++HRD+K N++ID + L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 147 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV--RVASRYFKGPELLVDY 204
Query: 294 TDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPS-EEYWKKSKLPNA 351
Y +D+WS GC+LA ++ K P G +QL +I K+ G+ +Y K +
Sbjct: 205 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 264
Query: 352 TLFK------PREPYKRCIQ-ETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIF 403
F R+ ++R + E P +L ++ LL D RLTA A+ +
Sbjct: 265 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 323
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 153/299 (51%), Gaps = 21/299 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D ++ + K+G+G YS V++A ++ + V +K ++ + + E L P
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENL----RGGP 92
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
N+I L +V +S + LVF ++ + D L + T+ ++ YM+++L L++CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH 148
Query: 235 NNGVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
+ G++HRD+K N++ID + L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV--RVASRYFKGPELLVDY 206
Query: 294 TDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPS-EEYWKKSKLPNA 351
Y +D+WS GC+LA ++ K P G +QL +I K+ G+ +Y K +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 352 TLFK------PREPYKRCIQ-ETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIF 403
F R+ ++R + E P +L ++ LL D RLTA A+ +
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 137/286 (47%), Gaps = 34/286 (11%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH 174
A+ + + +G+G++ V K KD +T + A+K + + + + + RE+ +L++LDH
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN++KL ++ S S Y+V +F+E + Q+ SG+ + H
Sbjct: 81 PNIMKLFEILED--SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 235 NNGVLHRDIKGSNLLIDD---DGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLL 291
+ ++HRD+K N+L++ D +KI DFGL++ F N K M R+ T +Y PE+L
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--MKDRIGTAYYIAPEVLR 196
Query: 292 GATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351
G Y D+WSAG IL LL+G P G+ E + L ++
Sbjct: 197 GT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV------------------ET 236
Query: 352 TLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
+ P R I + KD LI +L P+ R+TAT L
Sbjct: 237 GKYAFDLPQWRTISDDAKD-------LIRKMLTFHPSLRITATQCL 275
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 137/286 (47%), Gaps = 34/286 (11%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH 174
A+ + + +G+G++ V K KD +T + A+K + + + + + RE+ +L++LDH
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN++KL ++ S S Y+V +F+E + Q+ SG+ + H
Sbjct: 81 PNIMKLFEILED--SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 235 NNGVLHRDIKGSNLLIDD---DGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLL 291
+ ++HRD+K N+L++ D +KI DFGL++ F N K M R+ T +Y PE+L
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--MKDRIGTAYYIAPEVLR 196
Query: 292 GATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351
G Y D+WSAG IL LL+G P G+ E + L ++
Sbjct: 197 GT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV------------------ET 236
Query: 352 TLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
+ P R I + KD LI +L P+ R+TAT L
Sbjct: 237 GKYAFDLPQWRTISDDAKD-------LIRKMLTFHPSLRITATQCL 275
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 110/199 (55%), Gaps = 4/199 (2%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
++ + IG+G ++ V A+ +LTG+ VA+K + L P S++ + RE+ I++ L+HPN
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
++KL ++ + + LYL+ Y + E + + Q++S +++CH
Sbjct: 73 IVKLFEVIETEKT--LYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK 130
Query: 237 GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDY 296
++HRD+K NLL+D D +KIADFG ++ F K + + + Y PEL G
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK--LDTFCGSPPYAAPELFQGKKYD 188
Query: 297 GVGVDLWSAGCILAELLAG 315
G VD+WS G IL L++G
Sbjct: 189 GPEVDVWSLGVILYTLVSG 207
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 112/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 94 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG S P+ + T+ TL Y PPE++ G
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TTLCGTLDYLPPEMIEGRM 208
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 209 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 247
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 109/199 (54%), Gaps = 4/199 (2%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
++ + IG+G ++ V A+ +LTG+ VA+K + L P S++ + RE+ I++ L+HPN
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
++KL ++ + + LYL+ Y + E + + Q++S +++CH
Sbjct: 76 IVKLFEVIETEKT--LYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK 133
Query: 237 GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDY 296
++HRD+K NLL+D D +KIADFG ++ F K + + Y PEL G
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK--LDAFCGAPPYAAPELFQGKKYD 191
Query: 297 GVGVDLWSAGCILAELLAG 315
G VD+WS G IL L++G
Sbjct: 192 GPEVDVWSLGVILYTLVSG 210
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 137/286 (47%), Gaps = 34/286 (11%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH 174
A+ + + +G+G++ V K KD +T + A+K + + + + + RE+ +L++LDH
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN++KL ++ S S Y+V +F+E + Q+ SG+ + H
Sbjct: 81 PNIMKLFEILED--SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 235 NNGVLHRDIKGSNLLIDD---DGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLL 291
+ ++HRD+K N+L++ D +KI DFGL++ F N K M R+ T +Y PE+L
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--MKDRIGTAYYIAPEVLR 196
Query: 292 GATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351
G Y D+WSAG IL LL+G P G+ E + L ++
Sbjct: 197 GT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV------------------ET 236
Query: 352 TLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
+ P R I + KD LI +L P+ R+TAT L
Sbjct: 237 GKYAFDLPQWRTISDDAKD-------LIRKMLTFHPSLRITATQCL 275
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 154/301 (51%), Gaps = 25/301 (8%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D ++ + K+G+G YS V++A ++ + V +K ++ + + E L
Sbjct: 38 DDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENL----RGGT 93
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
N+IKL V +S + LVF Y+ + D L T+ ++ YM++LL L++CH
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQI----LTDFDIRFYMYELLKALDYCH 149
Query: 235 NNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
+ G++HRD+K N++ID L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 150 SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNV--RVASRYFKGPELLVDY 207
Query: 294 TDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPSEE---YWKKSKLP 349
Y +D+WS GC+LA ++ + P G+ +QL +I K+ G +EE Y KK +
Sbjct: 208 QMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLG--TEELYGYLKKYHID 265
Query: 350 NATLFK------PREPYKRCIQETFKDF-PPSSLPLIETLLAIDPAERLTATVALNSEVI 402
F R+ ++ I + P +L L++ LL D +RLTA A+
Sbjct: 266 LDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
Query: 403 F 403
+
Sbjct: 326 Y 326
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 112/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 25 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 84
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 85 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 142
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG S P+ + T+ TL Y PPE++ G
Sbjct: 143 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TTLCGTLDYLPPEMIEGRM 199
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 200 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 238
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 112/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 73 PNILRLYGYFHD--ATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG S P+ + T+ TL Y PPE++ G
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TTLCGTLDYLPPEMIEGRM 187
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 188 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 110/199 (55%), Gaps = 4/199 (2%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
++ + IG+G ++ V A+ +LTGK VA+K + L S++ + RE+ I++ L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
++KL ++ + + LYLV Y + E + + Q++S +++CH
Sbjct: 75 IVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 237 GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDY 296
++HRD+K NLL+D D +KIADFG ++ F +K + + + Y PEL G
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQGKKYD 190
Query: 297 GVGVDLWSAGCILAELLAG 315
G VD+WS G IL L++G
Sbjct: 191 GPEVDVWSLGVILYTLVSG 209
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 110/199 (55%), Gaps = 4/199 (2%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
++ + IG+G ++ V A+ +LTGK VA+K + L S++ + RE+ I++ L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
++KL ++ + + LYLV Y + E + + Q++S +++CH
Sbjct: 75 IVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 237 GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDY 296
++HRD+K NLL+D D +KIADFG ++ F +K + + + Y PEL G
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQGKKYD 190
Query: 297 GVGVDLWSAGCILAELLAG 315
G VD+WS G IL L++G
Sbjct: 191 GPEVDVWSLGVILYTLVSG 209
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 154/301 (51%), Gaps = 25/301 (8%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D ++ + K+G+G YS V++A ++ + V +K ++ + + E L
Sbjct: 43 DDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENL----RGGT 98
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
N+IKL V +S + LVF Y+ + D L T+ ++ YM++LL L++CH
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQI----LTDFDIRFYMYELLKALDYCH 154
Query: 235 NNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
+ G++HRD+K N++ID L++ D+GLA F+ P ++ + RV + +++ PELL+
Sbjct: 155 SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNV--RVASRYFKGPELLVDY 212
Query: 294 TDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPSEE---YWKKSKLP 349
Y +D+WS GC+LA ++ + P G+ +QL +I K+ G +EE Y KK +
Sbjct: 213 QMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLG--TEELYGYLKKYHID 270
Query: 350 NATLFK------PREPYKRCIQETFKDF-PPSSLPLIETLLAIDPAERLTATVALNSEVI 402
F R+ ++ I + P +L L++ LL D +RLTA A+
Sbjct: 271 LDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
Query: 403 F 403
+
Sbjct: 331 Y 331
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 112/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG S P+ + T+ TL Y PPE++ G
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TTLCGTLDYLPPEMIEGRM 182
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 183 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 130/268 (48%), Gaps = 26/268 (9%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR----FDNLEPESVKFMAREILILR 170
A +E + IG+G + V KA D + VALK VR F E ++ + LR
Sbjct: 96 AYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEH----LR 151
Query: 171 RLDHPNVIK----LEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVK-FTEPQVKCYMHQ 225
+ D N + LE C + F + +L L + + F+ P V+ + H
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHIC---MTFELLSMNLYELIKKNKFQGFSLPLVRKFAHS 208
Query: 226 LLSGLEHCHNNGVLHRDIKGSNLLIDDDGV--LKIADFGLASFFDPNHKHPMTSRVVTLW 283
+L L+ H N ++H D+K N+L+ G +K+ DFG + + + SR +
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSR----F 264
Query: 284 YRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYW 343
YR PE++LGA YG+ +D+WS GCILAELL G P++PG E +QL + +L G P ++
Sbjct: 265 YRAPEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLL 323
Query: 344 KKSKLPNATLFKPREPYKR-CIQETFKD 370
SK A F + Y R C T D
Sbjct: 324 DASK--RAKNFVSXKGYPRYCTVTTLSD 349
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 112/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 73 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG S P+ + T+ TL Y PPE++ G
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TTLCGTLDYLPPEMIEGRM 187
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 188 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 112/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG S P+ + T+ TL Y PPE++ G
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TTLCGTLDYLPPEMIEGRM 185
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 186 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 147/293 (50%), Gaps = 37/293 (12%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVK-FMAREILILRRLD 173
+D ++ +G+G++ V KD +TG+ A+K + ++ ++ K + RE+ +L++LD
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFH-YMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
HPN++KL + YLV Y +L S + +F+E + Q+LSG+ +
Sbjct: 91 HPNIMKLYEFFEDK--GYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITY 147
Query: 233 CHNNGVLHRDIKGSNLLIDD---DGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPEL 289
H N ++HRD+K NLL++ D ++I DFGL++ F+ + K M ++ T +Y PE+
Sbjct: 148 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MKDKIGTAYYIAPEV 205
Query: 290 LLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLP 349
L G Y D+WS G IL LL+G P G E + L K+ K + WKK
Sbjct: 206 LHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK---- 259
Query: 350 NATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVI 402
+ E+ KD LI +L P+ R++A AL+ E I
Sbjct: 260 --------------VSESAKD-------LIRKMLTYVPSMRISARDALDHEWI 291
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 111/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 69 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG + + + ++ TL Y PPE++ G
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSG---TLDYLPPEMIEGRM 183
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 184 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 109/199 (54%), Gaps = 4/199 (2%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
++ + IG+G ++ V A+ +LTGK VA+K + L S++ + RE+ I++ L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
++KL ++ + + LYLV Y + E + + Q++S +++CH
Sbjct: 75 IVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 237 GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDY 296
++HRD+K NLL+D D +KIADFG ++ F +K + + Y PEL G
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPELFQGKKYD 190
Query: 297 GVGVDLWSAGCILAELLAG 315
G VD+WS G IL L++G
Sbjct: 191 GPEVDVWSLGVILYTLVSG 209
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 143/284 (50%), Gaps = 37/284 (13%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVK-FMAREILILRRLDHPNVIKLEG 182
+G+G++ V KD +TG+ A+K + ++ ++ K + RE+ +L++LDHPN++KL
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 116
Query: 183 LVTSRMSCSLYLVFH-YMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHR 241
+ YLV Y +L S + +F+E + Q+LSG+ + H N ++HR
Sbjct: 117 FFEDK--GYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNKIVHR 173
Query: 242 DIKGSNLLIDD---DGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGV 298
D+K NLL++ D ++I DFGL++ F+ + K M ++ T +Y PE+L G Y
Sbjct: 174 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MKDKIGTAYYIAPEVLHGT--YDE 229
Query: 299 GVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPRE 358
D+WS G IL LL+G P G E + L K+ K + WKK
Sbjct: 230 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK------------- 276
Query: 359 PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVI 402
+ E+ KD LI +L P+ R++A AL+ E I
Sbjct: 277 -----VSESAKD-------LIRKMLTYVPSMRISARDALDHEWI 308
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 143/284 (50%), Gaps = 37/284 (13%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVK-FMAREILILRRLDHPNVIKLEG 182
+G+G++ V KD +TG+ A+K + ++ ++ K + RE+ +L++LDHPN++KL
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 117
Query: 183 LVTSRMSCSLYLVFH-YMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHR 241
+ YLV Y +L S + +F+E + Q+LSG+ + H N ++HR
Sbjct: 118 FFEDK--GYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNKIVHR 174
Query: 242 DIKGSNLLIDD---DGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGV 298
D+K NLL++ D ++I DFGL++ F+ + K M ++ T +Y PE+L G Y
Sbjct: 175 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MKDKIGTAYYIAPEVLHGT--YDE 230
Query: 299 GVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPRE 358
D+WS G IL LL+G P G E + L K+ K + WKK
Sbjct: 231 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK------------- 277
Query: 359 PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVI 402
+ E+ KD LI +L P+ R++A AL+ E I
Sbjct: 278 -----VSESAKD-------LIRKMLTYVPSMRISARDALDHEWI 309
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 111/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 69 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG S P+ + T TL Y PPE++ G
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TDLCGTLDYLPPEMIEGRM 183
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 184 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 111/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG S P+ + T TL Y PPE++ G
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TELCGTLDYLPPEMIEGRM 182
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 183 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 112/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 67 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG S P+ + T+ TL Y PPE++ G
Sbjct: 125 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TTLCGTLDYLPPEMIEGRM 181
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 182 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 220
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 110/199 (55%), Gaps = 4/199 (2%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
++ + IG+G ++ V A+ +LTGK VA++ + L S++ + RE+ I++ L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
++KL ++ + + LYLV Y + E + + Q++S +++CH
Sbjct: 75 IVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 237 GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDY 296
++HRD+K NLL+D D +KIADFG ++ F +K + + + Y PEL G
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQGKKYD 190
Query: 297 GVGVDLWSAGCILAELLAG 315
G VD+WS G IL L++G
Sbjct: 191 GPEVDVWSLGVILYTLVSG 209
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 112/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 12 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 71
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 72 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 129
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG S P+ + T+ TL Y PPE++ G
Sbjct: 130 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TTLCGTLDYLPPEMIEGRM 186
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 187 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 225
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 112/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG S P+ + T+ TL Y PPE++ G
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TTLCGTLDYLPPEMIEGRM 185
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 186 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 143/284 (50%), Gaps = 37/284 (13%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVK-FMAREILILRRLDHPNVIKLEG 182
+G+G++ V KD +TG+ A+K + ++ ++ K + RE+ +L++LDHPN++KL
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 93
Query: 183 LVTSRMSCSLYLVFH-YMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHR 241
+ YLV Y +L S + +F+E + Q+LSG+ + H N ++HR
Sbjct: 94 FFEDK--GYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNKIVHR 150
Query: 242 DIKGSNLLIDD---DGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGV 298
D+K NLL++ D ++I DFGL++ F+ + K M ++ T +Y PE+L G Y
Sbjct: 151 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MKDKIGTAYYIAPEVLHGT--YDE 206
Query: 299 GVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPRE 358
D+WS G IL LL+G P G E + L K+ K + WKK
Sbjct: 207 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK------------- 253
Query: 359 PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVI 402
+ E+ KD LI +L P+ R++A AL+ E I
Sbjct: 254 -----VSESAKD-------LIRKMLTYVPSMRISARDALDHEWI 285
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 110/204 (53%), Gaps = 8/204 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE--PESVKFMAREILILRRLD 173
+ ++ + +G+G Y V A + +T + VA+K V PE++K +EI I + L+
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKMLN 62
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
H NV+K G R YL Y P++ EP + + HQL++G+ +
Sbjct: 63 HENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLG 292
H G+ HRDIK NLL+D+ LKI+DFGLA+ F N++ + +++ TL Y PELL
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 293 ATDYGVGVDLWSAGCILAELLAGK 316
+ VD+WS G +L +LAG+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 111/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG S P+ + T TL Y PPE++ G
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TDLCGTLDYLPPEMIEGRM 182
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 183 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 110/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 94 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG + + + + TL Y PPE++ G
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCG---TLDYLPPEMIEGRM 208
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 209 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 247
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 110/204 (53%), Gaps = 8/204 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE--PESVKFMAREILILRRLD 173
+ ++ + +G+G Y V A + +T + VA+K V PE++K +EI I + L+
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKMLN 63
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
H NV+K G R YL Y P++ EP + + HQL++G+ +
Sbjct: 64 HENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLG 292
H G+ HRDIK NLL+D+ LKI+DFGLA+ F N++ + +++ TL Y PELL
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 293 ATDYGVGVDLWSAGCILAELLAGK 316
+ VD+WS G +L +LAG+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 111/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 73 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG S P+ + T TL Y PPE++ G
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TDLCGTLDYLPPEMIEGRM 187
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 188 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 110/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 73 PNILRLYGYFHD--ATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG + + + + TL Y PPE++ G
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXG---TLDYLPPEMIEGRM 187
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 188 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 111/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG S P+ + T TL Y PPE++ G
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TDLCGTLDYLPPEMIEGRM 182
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 183 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 110/205 (53%), Gaps = 8/205 (3%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE--PESVKFMAREILILRRL 172
+ ++ + +G+G Y V A + +T + VA+K V PE++K +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 62
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
+H NV+K G R YL Y P++ EP + + HQL++G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLL 291
H G+ HRDIK NLL+D+ LKI+DFGLA+ F N++ + +++ TL Y PELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 292 GATDYGVGVDLWSAGCILAELLAGK 316
+ VD+WS G +L +LAG+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 110/205 (53%), Gaps = 8/205 (3%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE--PESVKFMAREILILRRL 172
+ ++ + +G+G Y V A + +T + VA+K V PE++K +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 62
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
+H NV+K G R YL Y P++ EP + + HQL++G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLL 291
H G+ HRDIK NLL+D+ LKI+DFGLA+ F N++ + +++ TL Y PELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 292 GATDYGVGVDLWSAGCILAELLAGK 316
+ VD+WS G +L +LAG+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 110/205 (53%), Gaps = 8/205 (3%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE--PESVKFMAREILILRRL 172
+ ++ + +G+G Y V A + +T + VA+K V PE++K +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 62
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
+H NV+K G R YL Y P++ EP + + HQL++G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLL 291
H G+ HRDIK NLL+D+ LKI+DFGLA+ F N++ + +++ TL Y PELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 292 GATDYGVGVDLWSAGCILAELLAGK 316
+ VD+WS G +L +LAG+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 110/205 (53%), Gaps = 8/205 (3%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE--PESVKFMAREILILRRL 172
+ ++ + +G+G Y V A + +T + VA+K V PE++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEIXINKML 61
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
+H NV+K G R YL Y P++ EP + + HQL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLL 291
H G+ HRDIK NLL+D+ LKI+DFGLA+ F N++ + +++ TL Y PELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 292 GATDYGVGVDLWSAGCILAELLAGK 316
+ VD+WS G +L +LAG+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 111/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 73 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG S P+ + T+ TL Y PPE + G
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TTLCGTLDYLPPEXIEGRX 187
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 188 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 110/205 (53%), Gaps = 8/205 (3%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE--PESVKFMAREILILRRL 172
+ ++ + +G+G Y V A + +T + VA+K V PE++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEIXINKML 61
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
+H NV+K G R YL Y P++ EP + + HQL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLL 291
H G+ HRDIK NLL+D+ LKI+DFGLA+ F N++ + +++ TL Y PELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 292 GATDYGVGVDLWSAGCILAELLAGK 316
+ VD+WS G +L +LAG+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 110/205 (53%), Gaps = 8/205 (3%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE--PESVKFMAREILILRRL 172
+ ++ + +G+G Y V A + +T + VA+K V PE++K +EI I + L
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 60
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
+H NV+K G R YL Y P++ EP + + HQL++G+ +
Sbjct: 61 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 118
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLL 291
H G+ HRDIK NLL+D+ LKI+DFGLA+ F N++ + +++ TL Y PELL
Sbjct: 119 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178
Query: 292 GATDYGVGVDLWSAGCILAELLAGK 316
+ VD+WS G +L +LAG+
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 110/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 70 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG + + + + TL Y PPE++ G
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCG---TLDYLPPEMIEGRM 184
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 185 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 223
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 110/205 (53%), Gaps = 8/205 (3%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE--PESVKFMAREILILRRL 172
+ ++ + +G+G Y V A + +T + VA+K V PE++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
+H NV+K G R YL Y P++ EP + + HQL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLL 291
H G+ HRDIK NLL+D+ LKI+DFGLA+ F N++ + +++ TL Y PELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 292 GATDYGVGVDLWSAGCILAELLAGK 316
+ VD+WS G +L +LAG+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 110/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 69 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG + + + + TL Y PPE++ G
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCG---TLDYLPPEMIEGRM 183
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 184 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 110/205 (53%), Gaps = 8/205 (3%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE--PESVKFMAREILILRRL 172
+ ++ + +G+G Y V A + +T + VA+K V PE++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
+H NV+K G R YL Y P++ EP + + HQL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLL 291
H G+ HRDIK NLL+D+ LKI+DFGLA+ F N++ + +++ TL Y PELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 292 GATDYGVGVDLWSAGCILAELLAGK 316
+ VD+WS G +L +LAG+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 110/205 (53%), Gaps = 8/205 (3%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE--PESVKFMAREILILRRL 172
+ ++ + +G+G Y V A + +T + VA+K V PE++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
+H NV+K G R YL Y P++ EP + + HQL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLL 291
H G+ HRDIK NLL+D+ LKI+DFGLA+ F N++ + +++ TL Y PELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 292 GATDYGVGVDLWSAGCILAELLAGK 316
+ VD+WS G +L +LAG+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 109/199 (54%), Gaps = 4/199 (2%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
++ + IG+G ++ V A+ +LTGK VA++ + L S++ + RE+ I++ L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
++KL ++ + + LYLV Y + E + + Q++S +++CH
Sbjct: 75 IVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 237 GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDY 296
++HRD+K NLL+D D +KIADFG ++ F +K + + Y PEL G
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDEFCGSPPYAAPELFQGKKYD 190
Query: 297 GVGVDLWSAGCILAELLAG 315
G VD+WS G IL L++G
Sbjct: 191 GPEVDVWSLGVILYTLVSG 209
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 110/205 (53%), Gaps = 8/205 (3%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE--PESVKFMAREILILRRL 172
+ ++ + +G+G Y V A + +T + VA+K V PE++K +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEIXINKML 62
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
+H NV+K G R YL Y P++ EP + + HQL++G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLL 291
H G+ HRDIK NLL+D+ LKI+DFGLA+ F N++ + +++ TL Y PELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 180
Query: 292 GATDYGVGVDLWSAGCILAELLAGK 316
+ VD+WS G +L +LAG+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 110/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG + + + + TL Y PPE++ G
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCG---TLDYLPPEMIEGRM 185
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 186 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 111/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG S P+ + T TL Y PPE++ G
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TXLCGTLDYLPPEMIEGRM 182
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 183 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 110/205 (53%), Gaps = 8/205 (3%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE--PESVKFMAREILILRRL 172
+ ++ + +G+G Y V A + +T + VA+K V PE++K +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 62
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
+H NV+K G R YL Y P++ EP + + HQL++G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLL 291
H G+ HRDIK NLL+D+ LKI+DFGLA+ F N++ + +++ TL Y PELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 292 GATDYGVGVDLWSAGCILAELLAGK 316
+ VD+WS G +L +LAG+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 110/205 (53%), Gaps = 8/205 (3%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE--PESVKFMAREILILRRL 172
+ ++ + +G+G Y V A + +T + VA+K V PE++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
+H NV+K G R YL Y P++ EP + + HQL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLL 291
H G+ HRDIK NLL+D+ LKI+DFGLA+ F N++ + +++ TL Y PELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 292 GATDYGVGVDLWSAGCILAELLAGK 316
+ VD+WS G +L +LAG+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 110/205 (53%), Gaps = 8/205 (3%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE--PESVKFMAREILILRRL 172
+ ++ + +G+G Y V A + +T + VA+K V PE++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
+H NV+K G R YL Y P++ EP + + HQL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLL 291
H G+ HRDIK NLL+D+ LKI+DFGLA+ F N++ + +++ TL Y PELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 292 GATDYGVGVDLWSAGCILAELLAGK 316
+ VD+WS G +L +LAG+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 110/205 (53%), Gaps = 8/205 (3%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE--PESVKFMAREILILRRL 172
+ ++ + +G+G Y V A + +T + VA+K V PE++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
+H NV+K G R YL Y P++ EP + + HQL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLL 291
H G+ HRDIK NLL+D+ LKI+DFGLA+ F N++ + +++ TL Y PELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 292 GATDYGVGVDLWSAGCILAELLAGK 316
+ VD+WS G +L +LAG+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 110/205 (53%), Gaps = 8/205 (3%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE--PESVKFMAREILILRRL 172
+ ++ + +G+G Y V A + +T + VA+K V PE++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
+H NV+K G R YL Y P++ EP + + HQL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLL 291
H G+ HRDIK NLL+D+ LKI+DFGLA+ F N++ + +++ TL Y PELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 292 GATDYGVGVDLWSAGCILAELLAGK 316
+ VD+WS G +L +LAG+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 112/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 70 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIA+FG S P+ + T+ TL Y PPE++ G
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIANFGW-SVHAPSSRR--TTLCGTLDYLPPEMIEGRM 184
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 185 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 223
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 110/205 (53%), Gaps = 8/205 (3%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE--PESVKFMAREILILRRL 172
+ ++ + +G+G Y V A + +T + VA+K V PE++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
+H NV+K G R YL Y P++ EP + + HQL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLL 291
H G+ HRDIK NLL+D+ LKI+DFGLA+ F N++ + +++ TL Y PELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 292 GATDYGVGVDLWSAGCILAELLAGK 316
+ VD+WS G +L +LAG+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 110/205 (53%), Gaps = 8/205 (3%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE--PESVKFMAREILILRRL 172
+ ++ + +G+G Y V A + +T + VA+K V PE++K +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 62
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
+H NV+K G R YL Y P++ EP + + HQL++G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLL 291
H G+ HRDIK NLL+D+ LKI+DFGLA+ F N++ + +++ TL Y PELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 292 GATDYGVGVDLWSAGCILAELLAGK 316
+ VD+WS G +L +LAG+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 111/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ I+ALK + LE V+ + RE+ I L H
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 64
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 65 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG S P+ + T+ TL Y PPE++ G
Sbjct: 123 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TTLCGTLDYLPPEMIEGRM 179
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 180 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 218
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 110/207 (53%), Gaps = 4/207 (1%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
++ + IG+G ++ V A+ +LTGK VA+K + L S++ + RE+ I + L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
++KL ++ + + LYLV Y + E + + Q++S +++CH
Sbjct: 75 IVKLFEVIETEKT--LYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQK 132
Query: 237 GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDY 296
++HRD+K NLL+D D +KIADFG ++ F +K + + Y PEL G
Sbjct: 133 FIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPELFQGKKYD 190
Query: 297 GVGVDLWSAGCILAELLAGKPIMPGRT 323
G VD+WS G IL L++G G+
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 110/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG + + + + TL Y PPE++ G
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCG---TLDYLPPEMIEGRM 182
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 183 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 112/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIA+FG S P+ + T+ TL Y PPE++ G
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIANFGW-SVHAPSSRR--TTLCGTLDYLPPEMIEGRM 185
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 186 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 110/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG + + + + TL Y PPE++ G
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCG---TLDYLPPEMIEGRM 185
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 186 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 110/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG + + + + TL Y PPE++ G
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCG---TLDYLPPEMIEGRM 182
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 183 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 113/201 (56%), Gaps = 8/201 (3%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
++ + IG+G ++ V A+ +LTGK VA+K + L S++ + RE+ I++ L+HPN
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 177 VIKLEGLVTSRMSCSLYLVFHYME--HDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
++KL ++ + + LYLV Y L A +K E + + Q++S +++CH
Sbjct: 68 IVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGWMK--EKEARAKFRQIVSAVQYCH 123
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
++HRD+K NLL+D D +KIADFG ++ F +K + + + Y PEL G
Sbjct: 124 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQGKK 181
Query: 295 DYGVGVDLWSAGCILAELLAG 315
G VD+WS G IL L++G
Sbjct: 182 YDGPEVDVWSLGVILYTLVSG 202
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 110/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G + +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG + + + + TL Y PPE++ G
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCG---TLDYLPPEMIEGRM 185
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T E +I ++
Sbjct: 186 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 110/220 (50%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
+ FE +G+G + NVY A++ + I+ALK + LE V+ + RE+ I L H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L G S +YL+ Y KF E + Y+ +L + L +CH
Sbjct: 68 PNILRLYGYFHD--STRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V+HRDIK NLL+ G LKIADFG + + + + TL Y PPE++ G
Sbjct: 126 SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCG---TLDYLPPEMIEGRM 182
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLWS G + E L GKP T + +I ++
Sbjct: 183 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRV 221
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 109/205 (53%), Gaps = 8/205 (3%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE--PESVKFMAREILILRRL 172
+ ++ + +G+G Y V A + +T + VA+K V PE++K +EI I L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINAML 62
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
+H NV+K G R YL Y P++ EP + + HQL++G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLL 291
H G+ HRDIK NLL+D+ LKI+DFGLA+ F N++ + +++ TL Y PELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 292 GATDYGVGVDLWSAGCILAELLAGK 316
+ VD+WS G +L +LAG+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 111/225 (49%), Gaps = 16/225 (7%)
Query: 111 IPRRA---DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREI 166
+P+R D F+ + +G+G + NVY A++ I+ALK + LE E V+ + REI
Sbjct: 6 MPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREI 65
Query: 167 LILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQL 226
I L HPN++++ R +YL+ + +F E + +M +L
Sbjct: 66 EIQSHLRHPNILRMYNYFHDRKR--IYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL 123
Query: 227 LSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV--TLWY 284
L +CH V+HRDIK NLL+ G LKIADFG + H + R + TL Y
Sbjct: 124 ADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV-----HAPSLRRRXMCGTLDY 178
Query: 285 RPPELLLGATDYGVGVDLWSAGCILAELLAGKPIM--PGRTEVEQ 327
PPE++ G T + VDLW AG + E L G P P TE +
Sbjct: 179 LPPEMIEGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR 222
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 109/212 (51%), Gaps = 7/212 (3%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDHPNVIKLEG 182
+G+G + NVY A++ + I+ALK + LE V+ + RE+ I L HPN+++L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
+ +YL+ Y +F E + Y+ +L + L +CH+ V+HRD
Sbjct: 80 YFHD--ATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRD 137
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDL 302
IK NLL+ +G LKIADFG S P+ + T+ TL Y PPE++ G + VDL
Sbjct: 138 IKPENLLLGSNGELKIADFGW-SVHAPSSRR--TTLCGTLDYLPPEMIEGRM-HDEKVDL 193
Query: 303 WSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
WS G + E L G P T E +I ++
Sbjct: 194 WSLGVLCYEFLVGMPPFEAHTYQETYRRISRV 225
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 115/231 (49%), Gaps = 13/231 (5%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILR 170
+P RA+ +E + IG G+Y K + GKI+ K++ + ++ + + E+ +LR
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYME-HDLAGL--AASPEVKFTEPQ-VKCYMHQL 226
L HPN+++ + R + +LY+V Y E DLA + + E ++ + + V M QL
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 227 LSGLEHCHN-----NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV- 280
L+ CH + VLHRD+K +N+ +D +K+ DFGLA NH V
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDEDFAKEFVG 178
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
T +Y PE + Y D+WS GC+L EL A P ++ E KI
Sbjct: 179 TPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 140/284 (49%), Gaps = 37/284 (13%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVK-FMAREILILRRLDHPNVIKLEG 182
+G+G++ V KD +TG+ A+K + ++ ++ K + RE+ +L++LDHPN+ KL
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYE 93
Query: 183 LVTSRMSCSLYLVFH-YMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHR 241
+ YLV Y +L S + +F+E + Q+LSG+ + H N ++HR
Sbjct: 94 FFEDK--GYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYXHKNKIVHR 150
Query: 242 DIKGSNLLIDD---DGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGV 298
D+K NLL++ D ++I DFGL++ F+ + K ++ T +Y PE+L G Y
Sbjct: 151 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--XKDKIGTAYYIAPEVLHGT--YDE 206
Query: 299 GVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPRE 358
D+WS G IL LL+G P G E + L K+ K + WKK
Sbjct: 207 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK------------- 253
Query: 359 PYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVI 402
+ E+ KD LI L P+ R++A AL+ E I
Sbjct: 254 -----VSESAKD-------LIRKXLTYVPSXRISARDALDHEWI 285
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 109/205 (53%), Gaps = 8/205 (3%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE--PESVKFMAREILILRRL 172
+ ++ + +G+G V A + +T + VA+K V PE++K +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
+H NV+K G R YL Y P++ EP + + HQL++G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLL 291
H G+ HRDIK NLL+D+ LKI+DFGLA+ F N++ + +++ TL Y PELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 292 GATDYGVGVDLWSAGCILAELLAGK 316
+ VD+WS G +L +LAG+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILR 170
+P RA+ +E + IG G+Y K + GKI+ K++ + ++ + + E+ +LR
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYME-HDLAGL--AASPEVKFTEPQ-VKCYMHQL 226
L HPN+++ + R + +LY+V Y E DLA + + E ++ + + V M QL
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 227 LSGLEHCHNNG-----VLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV- 280
L+ CH VLHRD+K +N+ +D +K+ DFGLA NH V
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKTFVG 178
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
T +Y PE + Y D+WS GC+L EL A P ++ E KI
Sbjct: 179 TPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 107/212 (50%), Gaps = 7/212 (3%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDHPNVIKLEG 182
+G+G + NVY A++ + I+ALK + LE V+ + RE+ I L HPN+++L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
+ +YL+ Y +F E + Y+ +L + L +CH+ V+HRD
Sbjct: 80 YFHD--ATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRD 137
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDL 302
IK NLL+ +G LKIADFG + + + + TL Y PPE++ G + VDL
Sbjct: 138 IKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCG---TLDYLPPEMIEGRM-HDEKVDL 193
Query: 303 WSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
WS G + E L G P T E +I ++
Sbjct: 194 WSLGVLCYEFLVGMPPFEAHTYQETYRRISRV 225
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 115/231 (49%), Gaps = 13/231 (5%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILR 170
+P RA+ +E + IG G+Y K + GKI+ K++ + ++ + + E+ +LR
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYME-HDLAGL--AASPEVKFTEPQ-VKCYMHQL 226
L HPN+++ + R + +LY+V Y E DLA + + E ++ + + V M QL
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 227 LSGLEHCHN-----NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV- 280
L+ CH + VLHRD+K +N+ +D +K+ DFGLA NH V
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKAFVG 178
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
T +Y PE + Y D+WS GC+L EL A P ++ E KI
Sbjct: 179 TPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 110/225 (48%), Gaps = 16/225 (7%)
Query: 111 IPRRA---DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREI 166
+P+R D F+ +G+G + NVY A++ I+ALK + LE E V+ + REI
Sbjct: 6 MPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREI 65
Query: 167 LILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQL 226
I L HPN++++ R +YL+ + +F E + +M +L
Sbjct: 66 EIQSHLRHPNILRMYNYFHDRKR--IYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL 123
Query: 227 LSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV--TLWY 284
L +CH V+HRDIK NLL+ G LKIADFG + H + R + TL Y
Sbjct: 124 ADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV-----HAPSLRRRXMCGTLDY 178
Query: 285 RPPELLLGATDYGVGVDLWSAGCILAELLAGKPIM--PGRTEVEQ 327
PPE++ G T + VDLW AG + E L G P P TE +
Sbjct: 179 LPPEMIEGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR 222
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 110/225 (48%), Gaps = 16/225 (7%)
Query: 111 IPRRA---DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREI 166
+P+R D F+ +G+G + NVY A++ I+ALK + LE E V+ + REI
Sbjct: 7 MPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREI 66
Query: 167 LILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQL 226
I L HPN++++ R +YL+ + +F E + +M +L
Sbjct: 67 EIQSHLRHPNILRMYNYFHDRKR--IYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL 124
Query: 227 LSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV--TLWY 284
L +CH V+HRDIK NLL+ G LKIADFG + H + R + TL Y
Sbjct: 125 ADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV-----HAPSLRRRXMCGTLDY 179
Query: 285 RPPELLLGATDYGVGVDLWSAGCILAELLAGKPIM--PGRTEVEQ 327
PPE++ G T + VDLW AG + E L G P P TE +
Sbjct: 180 LPPEMIEGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR 223
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 142/306 (46%), Gaps = 53/306 (17%)
Query: 115 ADSFEKIDKIGQGTYSNVY--KAKDMLTGK-IVALKKVRFD---------NLEPESVKF- 161
+S+ K+ K+G G Y V K K+ + K I +KK +FD N+E KF
Sbjct: 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIE----KFH 90
Query: 162 --MAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQV 219
+ EI +L+ LDHPN+IKL + + YLV + E KF E
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKY--FYLVTEFYEGGELFEQIINRHKFDECDA 148
Query: 220 KCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVL---KIADFGLASFFDPNHKHPMT 276
M Q+LSG+ + H + ++HRDIK N+L+++ L KI DFGL+SFF ++K +
Sbjct: 149 ANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK--LR 206
Query: 277 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCG 336
R+ T +Y PE+L Y D+WS G I+ LL G P G+ + + + K+ K G
Sbjct: 207 DRLGTAYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEK--G 262
Query: 337 SPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVA 396
++ +K+ + LI+ +L D +R TA A
Sbjct: 263 KYYFDF-----------------------NDWKNISDEAKELIKLMLTYDYNKRCTAEEA 299
Query: 397 LNSEVI 402
LNS I
Sbjct: 300 LNSRWI 305
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 120/237 (50%), Gaps = 5/237 (2%)
Query: 113 RRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPES-VKFMAREILILRR 171
+R + F+ +G+G++S V A+++ T + A+K + ++ E+ V ++ RE ++ R
Sbjct: 6 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 65
Query: 172 LDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
LDHP +KL T + LY Y ++ F E + Y +++S LE
Sbjct: 66 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 123
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELL 290
+ H G++HRD+K N+L+++D ++I DFG A P K + V T Y PELL
Sbjct: 124 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 183
Query: 291 LGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347
+ DLW+ GCI+ +L+AG P E KI KL E+++ K++
Sbjct: 184 TEKSACK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 239
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 120/237 (50%), Gaps = 5/237 (2%)
Query: 113 RRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPES-VKFMAREILILRR 171
+R + F+ +G+G++S V A+++ T + A+K + ++ E+ V ++ RE ++ R
Sbjct: 7 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 66
Query: 172 LDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
LDHP +KL T + LY Y ++ F E + Y +++S LE
Sbjct: 67 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 124
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELL 290
+ H G++HRD+K N+L+++D ++I DFG A P K + V T Y PELL
Sbjct: 125 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 184
Query: 291 LGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347
+ DLW+ GCI+ +L+AG P E KI KL E+++ K++
Sbjct: 185 TEKSACK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 240
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 120/237 (50%), Gaps = 5/237 (2%)
Query: 113 RRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPES-VKFMAREILILRR 171
+R + F+ +G+G++S V A+++ T + A+K + ++ E+ V ++ RE ++ R
Sbjct: 5 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 64
Query: 172 LDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
LDHP +KL T + LY Y ++ F E + Y +++S LE
Sbjct: 65 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 122
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELL 290
+ H G++HRD+K N+L+++D ++I DFG A P K + V T Y PELL
Sbjct: 123 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 182
Query: 291 LGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347
+ DLW+ GCI+ +L+AG P E KI KL E+++ K++
Sbjct: 183 TEKSACK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 238
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 120/237 (50%), Gaps = 5/237 (2%)
Query: 113 RRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPES-VKFMAREILILRR 171
+R + F+ +G+G++S V A+++ T + A+K + ++ E+ V ++ RE ++ R
Sbjct: 4 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 63
Query: 172 LDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
LDHP +KL T + LY Y ++ F E + Y +++S LE
Sbjct: 64 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 121
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELL 290
+ H G++HRD+K N+L+++D ++I DFG A P K + V T Y PELL
Sbjct: 122 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 181
Query: 291 LGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347
+ DLW+ GCI+ +L+AG P E KI KL E+++ K++
Sbjct: 182 TEKSACK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 237
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 115/226 (50%), Gaps = 5/226 (2%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPES-VKFMAREILILRRLDHPNVIKLEG 182
+G+G++S V A+++ T + A+K + ++ E+ V ++ RE ++ RLDHP +KL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 97
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
T + LY Y ++ F E + Y +++S LE+ H G++HRD
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGATDYGVGVD 301
+K N+L+++D ++I DFG A P K + V T Y PELL + D
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA-SKSSD 216
Query: 302 LWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347
LW+ GCI+ +L+AG P E KI KL E+++ K++
Sbjct: 217 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 262
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 114/227 (50%), Gaps = 8/227 (3%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVR-FDNLEPESVKFMAREILILRRLDHP 175
+F KIG+G +S VY+A +L G VALKKV+ FD ++ ++ +EI +L++L+HP
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVK---FTEPQVKCYMHQLLSGLEH 232
NVIK ++ L DL+ + + + E V Y QL S LEH
Sbjct: 93 NVIKYYASFIEDNELNIVLELA-DAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
H+ V+HRDIK +N+ I GV+K+ D GL FF + S V T +Y PE +
Sbjct: 152 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS-SKTTAAHSLVGTPYYMSPE-RIH 209
Query: 293 ATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSP 338
Y D+WS GC+L E+ A P + + L K + C P
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYP 256
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 115/226 (50%), Gaps = 5/226 (2%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPES-VKFMAREILILRRLDHPNVIKLEG 182
+G+G++S V A+++ T + A+K + ++ E+ V ++ RE ++ RLDHP +KL
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 95
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
T + LY Y ++ F E + Y +++S LE+ H G++HRD
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 155
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGATDYGVGVD 301
+K N+L+++D ++I DFG A P K + V T Y PELL + D
Sbjct: 156 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK-SSD 214
Query: 302 LWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347
LW+ GCI+ +L+AG P E KI KL E+++ K++
Sbjct: 215 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 260
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 115/226 (50%), Gaps = 5/226 (2%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPES-VKFMAREILILRRLDHPNVIKLEG 182
+G+G++S V A+++ T + A+K + ++ E+ V ++ RE ++ RLDHP +KL
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 98
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
T + LY Y ++ F E + Y +++S LE+ H G++HRD
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 158
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGATDYGVGVD 301
+K N+L+++D ++I DFG A P K + V T Y PELL + D
Sbjct: 159 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACK-SSD 217
Query: 302 LWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347
LW+ GCI+ +L+AG P E KI KL E+++ K++
Sbjct: 218 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 263
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 115/226 (50%), Gaps = 5/226 (2%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPES-VKFMAREILILRRLDHPNVIKLEG 182
+G+G++S V A+++ T + A+K + ++ E+ V ++ RE ++ RLDHP +KL
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 98
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
T + LY Y ++ F E + Y +++S LE+ H G++HRD
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 158
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGATDYGVGVD 301
+K N+L+++D ++I DFG A P K + V T Y PELL + D
Sbjct: 159 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK-SSD 217
Query: 302 LWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347
LW+ GCI+ +L+AG P E KI KL E+++ K++
Sbjct: 218 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 263
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 115/226 (50%), Gaps = 5/226 (2%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPES-VKFMAREILILRRLDHPNVIKLEG 182
+G+G++S V A+++ T + A+K + ++ E+ V ++ RE ++ RLDHP +KL
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 95
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
T + LY Y ++ F E + Y +++S LE+ H G++HRD
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 155
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGATDYGVGVD 301
+K N+L+++D ++I DFG A P K + V T Y PELL + D
Sbjct: 156 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK-SSD 214
Query: 302 LWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347
LW+ GCI+ +L+AG P E KI KL E+++ K++
Sbjct: 215 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 260
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 115/226 (50%), Gaps = 5/226 (2%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPES-VKFMAREILILRRLDHPNVIKLEG 182
+G+G++S V A+++ T + A+K + ++ E+ V ++ RE ++ RLDHP +KL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 97
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
T + LY Y ++ F E + Y +++S LE+ H G++HRD
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGATDYGVGVD 301
+K N+L+++D ++I DFG A P K + V T Y PELL + D
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK-SSD 216
Query: 302 LWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347
LW+ GCI+ +L+AG P E KI KL E+++ K++
Sbjct: 217 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 262
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 115/226 (50%), Gaps = 5/226 (2%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPES-VKFMAREILILRRLDHPNVIKLEG 182
+G+G++S V A+++ T + A+K + ++ E+ V ++ RE ++ RLDHP +KL
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 95
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
T + LY Y ++ F E + Y +++S LE+ H G++HRD
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 155
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGATDYGVGVD 301
+K N+L+++D ++I DFG A P K + V T Y PELL + D
Sbjct: 156 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACK-SSD 214
Query: 302 LWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347
LW+ GCI+ +L+AG P E KI KL E+++ K++
Sbjct: 215 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 260
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 115/226 (50%), Gaps = 5/226 (2%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPES-VKFMAREILILRRLDHPNVIKLEG 182
+G+G++S V A+++ T + A+K + ++ E+ V ++ RE ++ RLDHP +KL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 97
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
T + LY Y ++ F E + Y +++S LE+ H G++HRD
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGATDYGVGVD 301
+K N+L+++D ++I DFG A P K + V T Y PELL + D
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK-SSD 216
Query: 302 LWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347
LW+ GCI+ +L+AG P E KI KL E+++ K++
Sbjct: 217 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 262
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 115/226 (50%), Gaps = 5/226 (2%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPES-VKFMAREILILRRLDHPNVIKLEG 182
+G+G++S V A+++ T + A+K + ++ E+ V ++ RE ++ RLDHP +KL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 97
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
T + LY Y ++ F E + Y +++S LE+ H G++HRD
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGATDYGVGVD 301
+K N+L+++D ++I DFG A P K + V T Y PELL + D
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK-SSD 216
Query: 302 LWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347
LW+ GCI+ +L+AG P E KI KL E+++ K++
Sbjct: 217 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 262
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 106/209 (50%), Gaps = 9/209 (4%)
Query: 112 PRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILR 170
PR + + +G+G ++ Y+ DM T ++ A K V + L+P + M+ EI I +
Sbjct: 38 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHK 97
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGL 230
LD+P+V+ G +Y+V TEP+ + +M Q + G+
Sbjct: 98 SLDNPHVVGFHGFFED--DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV 155
Query: 231 EHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASF--FDPNHKHPMTSRVVTLWYRPPE 288
++ HNN V+HRD+K NL ++DD +KI DFGLA+ FD K + T Y PE
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCG---TPNYIAPE 212
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKP 317
+L + VD+WS GCIL LL GKP
Sbjct: 213 VLC-KKGHSFEVDIWSLGCILYTLLVGKP 240
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 115/226 (50%), Gaps = 5/226 (2%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPES-VKFMAREILILRRLDHPNVIKLEG 182
+G+G++S V A+++ T + A+K + ++ E+ V ++ RE ++ RLDHP +KL
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 79
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
T + LY Y ++ F E + Y +++S LE+ H G++HRD
Sbjct: 80 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 139
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGATDYGVGVD 301
+K N+L+++D ++I DFG A P K + V T Y PELL + D
Sbjct: 140 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK-SSD 198
Query: 302 LWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347
LW+ GCI+ +L+AG P E KI KL E+++ K++
Sbjct: 199 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 244
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 106/209 (50%), Gaps = 9/209 (4%)
Query: 112 PRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILR 170
PR + + +G+G ++ Y+ DM T ++ A K V + L+P + M+ EI I +
Sbjct: 38 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHK 97
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGL 230
LD+P+V+ G +Y+V TEP+ + +M Q + G+
Sbjct: 98 SLDNPHVVGFHGFFED--DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV 155
Query: 231 EHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASF--FDPNHKHPMTSRVVTLWYRPPE 288
++ HNN V+HRD+K NL ++DD +KI DFGLA+ FD K + T Y PE
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCG---TPNYIAPE 212
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKP 317
+L + VD+WS GCIL LL GKP
Sbjct: 213 VLC-KKGHSFEVDIWSLGCILYTLLVGKP 240
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 130/251 (51%), Gaps = 22/251 (8%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVK-FMAREILILRRLDHPN 176
+ + +KIGQG VY A D+ TG+ VA++++ NL+ + K + EIL++R +PN
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRENKNPN 78
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFT---EPQVKCYMHQLLSGLEHC 233
++ L + + L++V Y LAG + + V T E Q+ + L LE
Sbjct: 79 IVNY--LDSYLVGDELWVVMEY----LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFL 132
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+N V+HRDIK N+L+ DG +K+ DFG + P + ++ V T ++ PE++
Sbjct: 133 HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSTMVGTPYWMAPEVVTRK 191
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
YG VD+WS G + E++ G+P P E L +Y + + + E KL + +
Sbjct: 192 A-YGPKVDIWSLGIMAIEMIEGEP--PYLNE-NPLRALYLIATNGTPELQNPEKL--SAI 245
Query: 354 FKPREPYKRCI 364
F R+ RC+
Sbjct: 246 F--RDFLNRCL 254
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 106/209 (50%), Gaps = 9/209 (4%)
Query: 112 PRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILR 170
PR + + +G+G ++ Y+ DM T ++ A K V + L+P + M+ EI I +
Sbjct: 22 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHK 81
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGL 230
LD+P+V+ G +Y+V TEP+ + +M Q + G+
Sbjct: 82 SLDNPHVVGFHGFFED--DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV 139
Query: 231 EHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASF--FDPNHKHPMTSRVVTLWYRPPE 288
++ HNN V+HRD+K NL ++DD +KI DFGLA+ FD K + T Y PE
Sbjct: 140 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCG---TPNYIAPE 196
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKP 317
+L + VD+WS GCIL LL GKP
Sbjct: 197 VLC-KKGHSFEVDIWSLGCILYTLLVGKP 224
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 132/293 (45%), Gaps = 41/293 (13%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALK--KVRFDNLEPESVKFMA----REILILRR 171
++ D IG+G S V + TG A+K +V + L PE ++ + RE ILR+
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 172 L-DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGL 230
+ HP++I L + + S ++LVF M + +V +E + + M LL +
Sbjct: 156 VAGHPHIITL--IDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAV 213
Query: 231 EHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELL 290
H N ++HRD+K N+L+DD+ ++++DFG + +P K + T Y PE+L
Sbjct: 214 SFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK--LRELCGTPGYLAPEIL 271
Query: 291 LGATD-----YGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKK 345
+ D YG VDLW+ G IL LLAG P R ++ L I + S W
Sbjct: 272 KCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDD 331
Query: 346 SKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398
T KD LI LL +DP RLTA AL
Sbjct: 332 RS------------------STVKD-------LISRLLQVDPEARLTAEQALQ 359
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 106/209 (50%), Gaps = 9/209 (4%)
Query: 112 PRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILR 170
PR + + +G+G ++ Y+ DM T ++ A K V + L+P + M+ EI I +
Sbjct: 38 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHK 97
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGL 230
LD+P+V+ G +Y+V TEP+ + +M Q + G+
Sbjct: 98 SLDNPHVVGFHGFFED--DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV 155
Query: 231 EHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASF--FDPNHKHPMTSRVVTLWYRPPE 288
++ HNN V+HRD+K NL ++DD +KI DFGLA+ FD K + T Y PE
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCG---TPNYIAPE 212
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGKP 317
+L + VD+WS GCIL LL GKP
Sbjct: 213 VLC-KKGHSFEVDIWSLGCILYTLLVGKP 240
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 115/226 (50%), Gaps = 5/226 (2%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPES-VKFMAREILILRRLDHPNVIKLEG 182
+G+G++S V A+++ T + A+K + ++ E+ V ++ RE ++ RLDHP +KL
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 94
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
T + LY Y ++ F E + Y +++S LE+ H G++HRD
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 154
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGATDYGVGVD 301
+K N+L+++D ++I DFG A P K + V T Y PELL + D
Sbjct: 155 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA-CKSSD 213
Query: 302 LWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347
LW+ GCI+ +L+AG P E KI KL E+++ K++
Sbjct: 214 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 259
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 130/252 (51%), Gaps = 22/252 (8%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVK-FMAREILILRRLDHPN 176
+ + +KIGQG VY A D+ TG+ VA++++ NL+ + K + EIL++R +PN
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRENKNPN 79
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFT---EPQVKCYMHQLLSGLEHC 233
++ L + + L++V Y LAG + + V T E Q+ + L LE
Sbjct: 80 IVNY--LDSYLVGDELWVVMEY----LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFL 133
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+N V+HRDIK N+L+ DG +K+ DFG + P + + V T ++ PE++
Sbjct: 134 HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSXMVGTPYWMAPEVVTRK 192
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
YG VD+WS G + E++ G+P P E L +Y + + + E KL + +
Sbjct: 193 A-YGPKVDIWSLGIMAIEMIEGEP--PYLNE-NPLRALYLIATNGTPELQNPEKL--SAI 246
Query: 354 FKPREPYKRCIQ 365
F R+ RC++
Sbjct: 247 F--RDFLNRCLE 256
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 130/252 (51%), Gaps = 22/252 (8%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVK-FMAREILILRRLDHPN 176
+ + +KIGQG VY A D+ TG+ VA++++ NL+ + K + EIL++R +PN
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRENKNPN 78
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFT---EPQVKCYMHQLLSGLEHC 233
++ L + + L++V Y LAG + + V T E Q+ + L LE
Sbjct: 79 IVNY--LDSYLVGDELWVVMEY----LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFL 132
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+N V+HRDIK N+L+ DG +K+ DFG + P + + V T ++ PE++
Sbjct: 133 HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSXMVGTPYWMAPEVVTRK 191
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
YG VD+WS G + E++ G+P P E L +Y + + + E KL + +
Sbjct: 192 A-YGPKVDIWSLGIMAIEMIEGEP--PYLNE-NPLRALYLIATNGTPELQNPEKL--SAI 245
Query: 354 FKPREPYKRCIQ 365
F R+ RC++
Sbjct: 246 F--RDFLNRCLE 255
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 115/226 (50%), Gaps = 5/226 (2%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPES-VKFMAREILILRRLDHPNVIKLEG 182
+G+G++S V A+++ T + A+K + ++ E+ V ++ RE ++ RLDHP +KL
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 94
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
T + LY Y ++ F E + Y +++S LE+ H G++HRD
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 154
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGATDYGVGVD 301
+K N+L+++D ++I DFG A P K + V T Y PELL + D
Sbjct: 155 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA-CKSSD 213
Query: 302 LWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347
LW+ GCI+ +L+AG P E KI KL E+++ K++
Sbjct: 214 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 259
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 110/204 (53%), Gaps = 15/204 (7%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVK-FMAREILILRRLDHPN 176
+ + +KIGQG VY A D+ TG+ VA++++ NL+ + K + EIL++R +PN
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRENKNPN 78
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFT---EPQVKCYMHQLLSGLEHC 233
++ L + + L++V Y LAG + + V T E Q+ + L LE
Sbjct: 79 IVNY--LDSYLVGDELWVVMEY----LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFL 132
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+N V+HRDIK N+L+ DG +K+ DFG + P + + V T ++ PE++
Sbjct: 133 HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSEMVGTPYWMAPEVVTRK 191
Query: 294 TDYGVGVDLWSAGCILAELLAGKP 317
YG VD+WS G + E++ G+P
Sbjct: 192 A-YGPKVDIWSLGIMAIEMIEGEP 214
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 125/274 (45%), Gaps = 42/274 (15%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPES-VKFMAREILILRRLDHPNVIKLEG 182
+G+G++S V A+++ T + A+K + ++ E+ V ++ RE ++ RLDHP +KL
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 100
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
T + LY Y ++ F E + Y +++S LE+ H G++HRD
Sbjct: 101 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 160
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGATDYGVGVD 301
+K N+L+++D ++I DFG A P K + V T Y PELL + D
Sbjct: 161 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK-SSD 219
Query: 302 LWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYK 361
LW+ GCI+ +L+AG P E KI KL EY
Sbjct: 220 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL------EY------------------- 254
Query: 362 RCIQETFKDFPPSSLP----LIETLLAIDPAERL 391
DFP + P L+E LL +D +RL
Sbjct: 255 --------DFPAAFFPKARDLVEKLLVLDATKRL 280
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 115/226 (50%), Gaps = 5/226 (2%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPES-VKFMAREILILRRLDHPNVIKLEG 182
+G+G++S V A+++ T + A+K + ++ E+ V ++ RE ++ RLDHP +KL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 97
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
T + LY Y ++ F E + Y +++S LE+ H G++HRD
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGATDYGVGVD 301
+K N+L+++D ++I DFG A P K + V T Y PELL + D
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXK-SSD 216
Query: 302 LWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347
LW+ GCI+ +L+AG P E KI KL E+++ K++
Sbjct: 217 LWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKAR 262
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 131/252 (51%), Gaps = 22/252 (8%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVK-FMAREILILRRLDHPN 176
+ + +KIGQG VY A D+ TG+ VA++++ NL+ + K + EIL++R +PN
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRENKNPN 79
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFT---EPQVKCYMHQLLSGLEHC 233
++ L + + L++V Y LAG + + V T E Q+ + L LE
Sbjct: 80 IVNY--LDSYLVGDELWVVMEY----LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFL 133
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+N V+HR+IK N+L+ DG +K+ DFG + P + ++ V T ++ PE++
Sbjct: 134 HSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSTMVGTPYWMAPEVVTRK 192
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
YG VD+WS G + E++ G+P P E L +Y + + + E KL + +
Sbjct: 193 A-YGPKVDIWSLGIMAIEMIEGEP--PYLNE-NPLRALYLIATNGTPELQNPEKL--SAI 246
Query: 354 FKPREPYKRCIQ 365
F R+ RC++
Sbjct: 247 F--RDFLNRCLE 256
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 114/226 (50%), Gaps = 5/226 (2%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPES-VKFMAREILILRRLDHPNVIKLEG 182
+G+G++S A+++ T + A+K + ++ E+ V ++ RE ++ RLDHP +KL
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 95
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
T + LY Y ++ F E + Y +++S LE+ H G++HRD
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 155
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGATDYGVGVD 301
+K N+L+++D ++I DFG A P K + V T Y PELL + D
Sbjct: 156 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK-SSD 214
Query: 302 LWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347
LW+ GCI+ +L+AG P E KI KL E+++ K++
Sbjct: 215 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 260
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 115/226 (50%), Gaps = 5/226 (2%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPES-VKFMAREILILRRLDHPNVIKLEG 182
+G+G++S V A+++ T + A+K + ++ E+ V ++ RE ++ RLDHP +KL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 97
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
T + LY Y ++ F E + Y +++S LE+ H G++HRD
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGATDYGVGVD 301
+K N+L+++D ++I DFG A P K + V T Y PELL + D
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK-SSD 216
Query: 302 LWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347
LW+ GCI+ +L+AG P E KI KL E+++ K++
Sbjct: 217 LWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKAR 262
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 114/226 (50%), Gaps = 5/226 (2%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPES-VKFMAREILILRRLDHPNVIKLEG 182
+G+G++S V A+++ T + A+K + ++ E+ V ++ RE ++ RLDHP +KL
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 102
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
+ LY Y ++ F E + Y +++S LE+ H G++HRD
Sbjct: 103 YFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 162
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGATDYGVGVD 301
+K N+L+++D ++I DFG A P K + V T Y PELL + D
Sbjct: 163 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK-SSD 221
Query: 302 LWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347
LW+ GCI+ +L+AG P E KI KL E+++ K++
Sbjct: 222 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 267
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 10/217 (4%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEP-ESVKFMAREILILRRLDHPN 176
F + +IG G++ VY A+D+ ++VA+KK+ + + E + + +E+ L++L HPN
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
I+ G + +LV Y + L + E ++ H L GL + H++
Sbjct: 116 TIQYRGCYLREHTA--WLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 173
Query: 237 GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATD- 295
++HRD+K N+L+ + G++K+ DFG AS P + V T ++ PE++L +
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF-----VGTPYWMAPEVILAMDEG 228
Query: 296 -YGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD+WS G EL KP + + L+ I
Sbjct: 229 QYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 265
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 10/217 (4%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEP-ESVKFMAREILILRRLDHPN 176
F + +IG G++ VY A+D+ ++VA+KK+ + + E + + +E+ L++L HPN
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
I+ G + +LV Y + L + E ++ H L GL + H++
Sbjct: 77 TIQYRGCYLREHTA--WLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 134
Query: 237 GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATD- 295
++HRD+K N+L+ + G++K+ DFG AS P + V T ++ PE++L +
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF-----VGTPYWMAPEVILAMDEG 189
Query: 296 -YGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD+WS G EL KP + + L+ I
Sbjct: 190 QYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 226
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 134/301 (44%), Gaps = 42/301 (13%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D ++ +++G+G +S V + + TG+ A K + L + + RE I R L HP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPE-----VKFTEPQVKCYMHQLLSGL 230
N+++L ++ FHY+ DL E ++E + Q+L +
Sbjct: 64 NIVRLHDSISEEG-------FHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESV 116
Query: 231 EHCHNNGVLHRDIKGSNLLI---DDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
HCH NG++HRD+K NLL+ +K+ADFGLA + + T Y P
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD-QQAWFGFAGTPGYLSP 175
Query: 288 ELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347
E +L YG VD+W+ G IL LL G P E H++Y+ + + ++
Sbjct: 176 E-VLRKDPYGKPVDMWACGVILYILLVGYPPFWD----EDQHRLYQQIKAGAYDF----- 225
Query: 348 LPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
P+ + P + LI +L I+PA+R+TA+ AL I Q T
Sbjct: 226 -PSP---------------EWDTVTPEAKDLINKMLTINPAKRITASEALKHPWICQRST 269
Query: 408 L 408
+
Sbjct: 270 V 270
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 125/229 (54%), Gaps = 8/229 (3%)
Query: 106 ALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAR 164
+L I + + F+ + +G+G+++ VY+A+ + TG VA+K + + + V+ +
Sbjct: 1 SLATCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQN 60
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVK-FTEPQVKCYM 223
E+ I +L HP++++L S +YLV + VK F+E + + +M
Sbjct: 61 EVKIHCQLKHPSILELYNYFED--SNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFM 118
Query: 224 HQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTL 282
HQ+++G+ + H++G+LHRD+ SNLL+ + +KIADFGLA+ P+ KH + T
Sbjct: 119 HQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH--YTLCGTP 176
Query: 283 WYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y PE+ + +G+ D+WS GC+ LL G+P T L+K+
Sbjct: 177 NYISPEIATRSA-HGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV 224
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 134/301 (44%), Gaps = 42/301 (13%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D ++ +++G+G +S V + + TG+ A K + L + + RE I R L HP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPE-----VKFTEPQVKCYMHQLLSGL 230
N+++L ++ FHY+ DL E ++E + Q+L +
Sbjct: 64 NIVRLHDSISEEG-------FHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESV 116
Query: 231 EHCHNNGVLHRDIKGSNLLI---DDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
HCH NG++HRD+K NLL+ +K+ADFGLA + + T Y P
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD-QQAWFGFAGTPGYLSP 175
Query: 288 ELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347
E +L YG VD+W+ G IL LL G P E H++Y+ + + ++
Sbjct: 176 E-VLRKDPYGKPVDMWACGVILYILLVGYPPFWD----EDQHRLYQQIKAGAYDF----- 225
Query: 348 LPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
P+ + P + LI +L I+PA+R+TA+ AL I Q T
Sbjct: 226 -PSP---------------EWDTVTPEAKDLINKMLTINPAKRITASEALKHPWICQRST 269
Query: 408 L 408
+
Sbjct: 270 V 270
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 132/296 (44%), Gaps = 34/296 (11%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D ++ D +G G +S V A+D T K+VA+K + + LE + M EI +L ++ HP
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS-MENEIAVLHKIKHP 76
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
N++ L+ + S LYL+ + + +TE + Q+L +++ H+
Sbjct: 77 NIVALDDIYES--GGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 236 NGVLHRDIKGSNLL---IDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
G++HRD+K NLL +D+D + I+DFGL+ DP +++ T Y PE +L
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLSTACGTPGYVAPE-VLA 191
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352
Y VD WS G I LL G P + + +I K
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK------------------A 233
Query: 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIFQDRTL 408
++ PY I ++ KDF I L+ DP +R T AL I D L
Sbjct: 234 EYEFDSPYWDDISDSAKDF-------IRHLMEKDPEKRFTCEQALQHPWIAGDTAL 282
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 133/296 (44%), Gaps = 34/296 (11%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D ++ D +G G +S V A+D T K+VA+K + + LE + M EI +L ++ HP
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS-MENEIAVLHKIKHP 76
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
N++ L+ + S LYL+ + + +TE + Q+L +++ H+
Sbjct: 77 NIVALDDIYES--GGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 236 NGVLHRDIKGSNLL---IDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
G++HRD+K NLL +D+D + I+DFGL+ DP +++ T Y PE +L
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLSTACGTPGYVAPE-VLA 191
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352
Y VD WS G I LL G P + + +I K EY S
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK------AEYEFDS------ 239
Query: 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIFQDRTL 408
PY I ++ KDF I L+ DP +R T AL I D L
Sbjct: 240 ------PYWDDISDSAKDF-------IRHLMEKDPEKRFTCEQALQHPWIAGDTAL 282
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 132/296 (44%), Gaps = 34/296 (11%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D ++ D +G G +S V A+D T K+VA+K + + LE + M EI +L ++ HP
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS-MENEIAVLHKIKHP 76
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
N++ L+ + S LYL+ + + +TE + Q+L +++ H+
Sbjct: 77 NIVALDDIYES--GGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 236 NGVLHRDIKGSNLL---IDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
G++HRD+K NLL +D+D + I+DFGL+ DP +++ T Y PE +L
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLSTACGTPGYVAPE-VLA 191
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352
Y VD WS G I LL G P + + +I K
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK------------------A 233
Query: 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIFQDRTL 408
++ PY I ++ KDF I L+ DP +R T AL I D L
Sbjct: 234 EYEFDSPYWDDISDSAKDF-------IRHLMEKDPEKRFTCEQALQHPWIAGDTAL 282
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 132/296 (44%), Gaps = 34/296 (11%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D ++ D +G G +S V A+D T K+VA+K + LE + M EI +L ++ HP
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGS-MENEIAVLHKIKHP 76
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
N++ L+ + S LYL+ + + +TE + Q+L +++ H+
Sbjct: 77 NIVALDDIYES--GGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 236 NGVLHRDIKGSNLL---IDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
G++HRD+K NLL +D+D + I+DFGL+ DP +++ T Y PE +L
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLSTACGTPGYVAPE-VLA 191
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNAT 352
Y VD WS G I LL G P + + +I K EY S
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK------AEYEFDS------ 239
Query: 353 LFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIFQDRTL 408
PY I ++ KDF I L+ DP +R T AL I D L
Sbjct: 240 ------PYWDDISDSAKDF-------IRHLMEKDPEKRFTCEQALQHPWIAGDTAL 282
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 104/220 (47%), Gaps = 7/220 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDH 174
D FE +G+G + NVY A++ + IVALK + +E E V+ + REI I L H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++L R +YL+ Y F E + M +L L +CH
Sbjct: 83 PNILRLYNYFYDRRR--IYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCH 140
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
V+HRDIK NLL+ G LKIADFG + + M TL Y PPE++ G
Sbjct: 141 GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCG---TLDYLPPEMIEGRM 197
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKL 334
+ VDLW G + ELL G P + E +I K+
Sbjct: 198 -HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV 236
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 110/199 (55%), Gaps = 8/199 (4%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVK-FMAREILILRRLDHP 175
+++ + +G+G++ V A TG+ VALK + L ++ + REI LR L HP
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
++IKL ++ S+ + +V Y ++L + K +E + + + Q++S +E+CH
Sbjct: 74 HIIKLYDVIKSK--DEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHR 130
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ ++HRD+K NLL+D+ +KIADFGL++ D N + + + Y PE++ G
Sbjct: 131 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVISGKL 187
Query: 295 DYGVGVDLWSAGCILAELL 313
G VD+WS G IL +L
Sbjct: 188 YAGPEVDVWSCGVILYVML 206
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 110/199 (55%), Gaps = 8/199 (4%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVK-FMAREILILRRLDHP 175
+++ + +G+G++ V A TG+ VALK + L ++ + REI LR L HP
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
++IKL ++ S+ + +V Y ++L + K +E + + + Q++S +E+CH
Sbjct: 75 HIIKLYDVIKSK--DEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHR 131
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ ++HRD+K NLL+D+ +KIADFGL++ D N + + + Y PE++ G
Sbjct: 132 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVISGKL 188
Query: 295 DYGVGVDLWSAGCILAELL 313
G VD+WS G IL +L
Sbjct: 189 YAGPEVDVWSCGVILYVML 207
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 110/199 (55%), Gaps = 8/199 (4%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVK-FMAREILILRRLDHP 175
+++ + +G+G++ V A TG+ VALK + L ++ + REI LR L HP
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
++IKL ++ S+ + +V Y ++L + K +E + + + Q++S +E+CH
Sbjct: 65 HIIKLYDVIKSK--DEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHR 121
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ ++HRD+K NLL+D+ +KIADFGL++ D N + + + Y PE++ G
Sbjct: 122 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVISGKL 178
Query: 295 DYGVGVDLWSAGCILAELL 313
G VD+WS G IL +L
Sbjct: 179 YAGPEVDVWSCGVILYVML 197
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 110/199 (55%), Gaps = 8/199 (4%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVK-FMAREILILRRLDHP 175
+++ + +G+G++ V A TG+ VALK + L ++ + REI LR L HP
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
++IKL ++ S+ + +V Y ++L + K +E + + + Q++S +E+CH
Sbjct: 69 HIIKLYDVIKSK--DEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHR 125
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ ++HRD+K NLL+D+ +KIADFGL++ D N + + + Y PE++ G
Sbjct: 126 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVISGKL 182
Query: 295 DYGVGVDLWSAGCILAELL 313
G VD+WS G IL +L
Sbjct: 183 YAGPEVDVWSCGVILYVML 201
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 131/291 (45%), Gaps = 43/291 (14%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH 174
+D+++ +++G+G +S V + TG A K + L + + RE I R+L H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDL-AGLAASPEVK----FTEPQVKCYMHQLLSG 229
PN+++L + FHY+ DL G ++ ++E + Q+L
Sbjct: 88 PNIVRLHDSIQEES-------FHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES 140
Query: 230 LEHCHNNGVLHRDIKGSNLLIDDD---GVLKIADFGLASFFDPNHKHPMTSRVVTLWYRP 286
+ +CH+NG++HR++K NLL+ +K+ADFGLA + N T Y
Sbjct: 141 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLS 198
Query: 287 PELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS 346
PE +L Y VD+W+ G IL LL G P E H++Y + + +Y
Sbjct: 199 PE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWD----EDQHRLYAQIKAGAYDY---- 249
Query: 347 KLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
P+ + P + LI+++L ++P +R+TA AL
Sbjct: 250 --PSP---------------EWDTVTPEAKSLIDSMLTVNPKKRITADQAL 283
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 130/273 (47%), Gaps = 37/273 (13%)
Query: 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF-MAREILILRRLDHPNVIKL 180
+ +G+G++ V A T + VALK + L+ + + REI L+ L HP++IKL
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74
Query: 181 EGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLH 240
++T+ + +V Y +L + + TE + + + Q++ +E+CH + ++H
Sbjct: 75 YDVITT--PTDIVMVIEYAGGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHRHKIVH 131
Query: 241 RDIKGSNLLIDDDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGATDYGVG 299
RD+K NLL+DD+ +KIADFGL++ D N + + + Y PE++ G G
Sbjct: 132 RDLKPENLLLDDNLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVINGKLYAGPE 188
Query: 300 VDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREP 359
VD+WS G +L +L G+ +P E +PN LFK
Sbjct: 189 VDVWSCGIVLYVMLVGR--LPFDDEF----------------------IPN--LFK---K 219
Query: 360 YKRCIQETFKDFPPSSLPLIETLLAIDPAERLT 392
C+ P + LI ++ DP +R+T
Sbjct: 220 VNSCVYVMPDFLSPGAQSLIRRMIVADPMQRIT 252
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 111/219 (50%), Gaps = 7/219 (3%)
Query: 118 FEKIDKIGQGTYSNVYKAKDML---TGKIVALKKVRFDNLEPESVKFMAREILILRRLDH 174
FE + +GQG++ V+ + + +G + A+K ++ L+ E IL ++H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P V+KL + LYL+ ++ S EV FTE VK Y+ +L GL+H H
Sbjct: 90 PFVVKLH--YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLH 147
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ G+++RD+K N+L+D++G +K+ DFGL+ +H+ S T+ Y PE ++
Sbjct: 148 SLGIIYRDLKPENILLDEEGHIKLTDFGLSK-EAIDHEKKAYSFCGTVEYMAPE-VVNRQ 205
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYK 333
+ D WS G ++ E+L G G+ E + I K
Sbjct: 206 GHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILK 244
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 131/291 (45%), Gaps = 43/291 (14%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH 174
+D+++ +++G+G +S V + TG A K + L + + RE I R+L H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDL-AGLAASPEVK----FTEPQVKCYMHQLLSG 229
PN+++L + FHY+ DL G ++ ++E + Q+L
Sbjct: 64 PNIVRLHDSIQEES-------FHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES 116
Query: 230 LEHCHNNGVLHRDIKGSNLLIDDD---GVLKIADFGLASFFDPNHKHPMTSRVVTLWYRP 286
+ +CH+NG++HR++K NLL+ +K+ADFGLA + N T Y
Sbjct: 117 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLS 174
Query: 287 PELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS 346
PE +L Y VD+W+ G IL LL G P E H++Y + + +Y
Sbjct: 175 PE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWD----EDQHRLYAQIKAGAYDY---- 225
Query: 347 KLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
P+ + P + LI+++L ++P +R+TA AL
Sbjct: 226 --PSP---------------EWDTVTPEAKSLIDSMLTVNPKKRITADQAL 259
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 129/301 (42%), Gaps = 42/301 (13%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D ++ + IG+G +S V + + TG A K + L + + RE I R L H
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHS 63
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPE-----VKFTEPQVKCYMHQLLSGL 230
N+++L ++ FHY+ DL E ++E + Q+L +
Sbjct: 64 NIVRLHDSISEEG-------FHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV 116
Query: 231 EHCHNNGVLHRDIKGSNLLIDDD---GVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
HCH GV+HRD+K NLL+ +K+ADFGLA + + T Y P
Sbjct: 117 LHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGD-QQAWFGFAGTPGYLSP 175
Query: 288 ELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347
E+L YG VD+W+ G IL LL G P E HK+Y+ + + ++
Sbjct: 176 EVLRKEA-YGKPVDIWACGVILYILLVGYPPFWD----EDQHKLYQQIKAGAYDF----- 225
Query: 348 LPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIFQDRT 407
P+ + P + LI +L I+PA+R+TA AL + Q T
Sbjct: 226 -PSP---------------EWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWVCQRST 269
Query: 408 L 408
+
Sbjct: 270 V 270
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 131/291 (45%), Gaps = 43/291 (14%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH 174
+D+++ +++G+G +S V + TG A K + L + + RE I R+L H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDL-AGLAASPEVK----FTEPQVKCYMHQLLSG 229
PN+++L + FHY+ DL G ++ ++E + Q+L
Sbjct: 65 PNIVRLHDSIQEES-------FHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES 117
Query: 230 LEHCHNNGVLHRDIKGSNLLIDDD---GVLKIADFGLASFFDPNHKHPMTSRVVTLWYRP 286
+ +CH+NG++HR++K NLL+ +K+ADFGLA + N T Y
Sbjct: 118 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLS 175
Query: 287 PELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS 346
PE +L Y VD+W+ G IL LL G P E H++Y + + +Y
Sbjct: 176 PE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWD----EDQHRLYAQIKAGAYDY---- 226
Query: 347 KLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
P+ + P + LI+++L ++P +R+TA AL
Sbjct: 227 --PSP---------------EWDTVTPEAKSLIDSMLTVNPKKRITADQAL 260
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 121/250 (48%), Gaps = 14/250 (5%)
Query: 122 DKIGQGTYSNVYKAKD--MLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIK 179
D +G+G+Y V + D L + V + K + P + +EI +LRRL H NVI+
Sbjct: 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 180 LEGLVTSRMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEPQVKCYMHQLLSGLEHCHNNGV 238
L ++ + +Y+V Y + + S PE +F Q Y QL+ GLE+ H+ G+
Sbjct: 71 LVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGI 130
Query: 239 LHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV--TLWYRPPELLLGATDY 296
+H+DIK NLL+ G LKI+ G+A P T R + ++PPE+ G +
Sbjct: 131 VHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADD-TCRTSQGSPAFQPPEIANGLDTF 189
Query: 297 -GVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFK 355
G VD+WSAG L + G + P E + ++K+++ G S P + L K
Sbjct: 190 SGFKVDIWSAGVTLYNITTG--LYP--FEGDNIYKLFENIGKGSYAIPGDCGPPLSDLLK 245
Query: 356 ---PREPYKR 362
EP KR
Sbjct: 246 GMLEYEPAKR 255
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 131/291 (45%), Gaps = 43/291 (14%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH 174
+D+++ +++G+G +S V + TG A K + L + + RE I R+L H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDL-AGLAASPEVK----FTEPQVKCYMHQLLSG 229
PN+++L + FHY+ DL G ++ ++E + Q+L
Sbjct: 65 PNIVRLHDSIQEES-------FHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES 117
Query: 230 LEHCHNNGVLHRDIKGSNLLIDDD---GVLKIADFGLASFFDPNHKHPMTSRVVTLWYRP 286
+ +CH+NG++HR++K NLL+ +K+ADFGLA + N T Y
Sbjct: 118 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLS 175
Query: 287 PELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS 346
PE +L Y VD+W+ G IL LL G P E H++Y + + +Y
Sbjct: 176 PE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWD----EDQHRLYAQIKAGAYDY---- 226
Query: 347 KLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
P+ + P + LI+++L ++P +R+TA AL
Sbjct: 227 --PSP---------------EWDTVTPEAKSLIDSMLTVNPKKRITADQAL 260
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 127/285 (44%), Gaps = 36/285 (12%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+F ++ +G G +S V+ K LTGK+ ALK ++ +S + EI +L+++ H N
Sbjct: 10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSS--LENEIAVLKKIKHEN 67
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
++ LE + S + YLV + +TE + Q+LS +++ H N
Sbjct: 68 IVTLEDIYES--TTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN 125
Query: 237 GVLHRDIKGSNLLI---DDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
G++HRD+K NLL +++ + I DFGL+ M++ T Y PE +L
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPE-VLAQ 181
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
Y VD WS G I LL G P TE + KI E Y
Sbjct: 182 KPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKI-------KEGY----------- 223
Query: 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398
++ P+ I E+ KDF I LL DP ER T AL+
Sbjct: 224 YEFESPFWDDISESAKDF-------ICHLLEKDPNERYTCEKALS 261
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 107/204 (52%), Gaps = 15/204 (7%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
F+ ++K+G+G+Y +VYKA TG+IVA+K+V ++ E +K EI I+++ D P+V
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIK----EISIMQQCDSPHV 86
Query: 178 IKLEGLVTSRMSCSLYLVFHYM-EHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
+K G + + L++V Y ++ + TE ++ + L GLE+ H
Sbjct: 87 VKYYG--SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM 144
Query: 237 GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR---VVTLWYRPPELLLGA 293
+HRDIK N+L++ +G K+ADFG+A M R + T ++ PE ++
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFGVAGQL----TDXMAKRNXVIGTPFWMAPE-VIQE 199
Query: 294 TDYGVGVDLWSAGCILAELLAGKP 317
Y D+WS G E+ GKP
Sbjct: 200 IGYNCVADIWSLGITAIEMAEGKP 223
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 108/217 (49%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I IG G++ V K M TG A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V YM +F+EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +K+ADFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 108/217 (49%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I IG G++ V K M TG A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V YM +F+EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +K+ADFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 137/295 (46%), Gaps = 44/295 (14%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV---RFDNLEPESVKFMAREILILRRL 172
D +E + IG+G +S V + + TG+ A+K V +F + S + + RE I L
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLA------ASPEVKFTEPQVKCYMHQL 226
HP++++L L T LY+VF +M D A L A ++E YM Q+
Sbjct: 84 KHPHIVEL--LETYSSDGMLYMVFEFM--DGADLCFEIVKRADAGFVYSEAVASHYMRQI 139
Query: 227 LSGLEHCHNNGVLHRDIKGSNLLI---DDDGVLKIADFGLASFFDPNHKHPMTSRVVTLW 283
L L +CH+N ++HRD+K N+L+ ++ +K+ DFG+A + RV T
Sbjct: 140 LEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGES-GLVAGGRVGTPH 198
Query: 284 YRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYW 343
+ PE ++ YG VD+W G IL LL+G +P E+L
Sbjct: 199 FMAPE-VVKREPYGKPVDVWGCGVILFILLSG--CLPFYGTKERLF-------------- 241
Query: 344 KKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398
+ + PR+ I E+ KD L+ +L +DPAER+T ALN
Sbjct: 242 -EGIIKGKYKMNPRQWSH--ISESAKD-------LVRRMLMLDPAERITVYEALN 286
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 18/203 (8%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGL 183
+G+GTY VY +D+ +A+K++ + + + EI + + L H N+++ G
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEI--PERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 87
Query: 184 VTSRMSCSLYLVFHYMEH----DLAGLAASP--EVKFTEPQVKCYMHQLLSGLEHCHNNG 237
+ ++ ME L+ L S +K E + Y Q+L GL++ H+N
Sbjct: 88 FSENGFIKIF-----MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ 142
Query: 238 VLHRDIKGSNLLIDD-DGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELL-LGAT 294
++HRDIKG N+LI+ GVLKI+DFG + +P T TL Y PE++ G
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRL--AGINPCTETFTGTLQYMAPEIIDKGPR 200
Query: 295 DYGVGVDLWSAGCILAELLAGKP 317
YG D+WS GC + E+ GKP
Sbjct: 201 GYGKAADIWSLGCTIIEMATGKP 223
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 6/210 (2%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE-SVKFMAREILILRRLDHPN 176
++ +DK+G G S VY A+D + VA+K + E E ++K RE+ +L H N
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
++ + V C YLV Y+E + + +Q+L G++H H+
Sbjct: 73 IVSMID-VDEEDDC-YYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM 130
Query: 237 GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG-ATD 295
++HRDIK N+LID + LKI DFG+A + T+ Y PE G ATD
Sbjct: 131 RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATD 190
Query: 296 YGVGVDLWSAGCILAELLAGKPIMPGRTEV 325
D++S G +L E+L G+P G T V
Sbjct: 191 E--CTDIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 18/203 (8%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGL 183
+G+GTY VY +D+ +A+K++ + + + EI + + L H N+++ G
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEI--PERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 73
Query: 184 VTSRMSCSLYLVFHYMEH----DLAGLAASP--EVKFTEPQVKCYMHQLLSGLEHCHNNG 237
+ ++ ME L+ L S +K E + Y Q+L GL++ H+N
Sbjct: 74 FSENGFIKIF-----MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ 128
Query: 238 VLHRDIKGSNLLIDD-DGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELL-LGAT 294
++HRDIKG N+LI+ GVLKI+DFG + +P T TL Y PE++ G
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRL--AGINPCTETFTGTLQYMAPEIIDKGPR 186
Query: 295 DYGVGVDLWSAGCILAELLAGKP 317
YG D+WS GC + E+ GKP
Sbjct: 187 GYGKAADIWSLGCTIIEMATGKP 209
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 131/291 (45%), Gaps = 44/291 (15%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH 174
+D FE ++G+G S VY+ K T K ALK ++ + K + EI +L RL H
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLK----KTVDKKIVRTEIGVLLRLSH 107
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVK---FTEPQVKCYMHQLLSGLE 231
PN+IKL+ + + SL L E G V+ ++E + Q+L +
Sbjct: 108 PNIIKLKEIFETPTEISLVL-----ELVTGGELFDRIVEKGYYSERDAADAVKQILEAVA 162
Query: 232 HCHNNGVLHRDIKGSNLLIDD---DGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
+ H NG++HRD+K NLL D LKIADFGL+ + H+ M + T Y PE
Sbjct: 163 YLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE--HQVLMKTVCGTPGYCAPE 220
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAG-KPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347
+L G YG VD+WS G I LL G +P R + +I EY+ S
Sbjct: 221 ILRGCA-YGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNC------EYYFIS- 272
Query: 348 LPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398
P+ + KD L+ L+ +DP +RLT AL
Sbjct: 273 -----------PWWDEVSLNAKD-------LVRKLIVLDPKKRLTTFQALQ 305
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 97/199 (48%), Gaps = 6/199 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
+ + ++ KIG+G++ K G+ +K++ + + + RE+ +L + HP
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHD--LAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
N+++ + + SLY+V Y E + A V F E Q+ + Q+ L+H
Sbjct: 84 NIVQYRE--SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV 141
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ +LHRDIK N+ + DG +++ DFG+A + + + T +Y PE+
Sbjct: 142 HDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARAC-IGTPYYLSPEICENK 200
Query: 294 TDYGVGVDLWSAGCILAEL 312
Y D+W+ GC+L EL
Sbjct: 201 P-YNNKSDIWALGCVLYEL 218
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 114/247 (46%), Gaps = 33/247 (13%)
Query: 113 RRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL 172
R A FE+I +GQG + V KA++ L + A+KK+R E + + E+++L L
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASL 59
Query: 173 DHPNVIK-----------LEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVK 220
+H V++ ++ + + +L++ Y E+ L L S + +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW 119
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD------------ 268
Q+L L + H+ G++HRD+K N+ ID+ +KI DFGLA
Sbjct: 120 RLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 269 -PNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQ 327
P +TS + T Y E+L G Y +D++S G I E+ I P T +E+
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM-----IYPFSTGMER 234
Query: 328 LHKIYKL 334
++ + KL
Sbjct: 235 VNILKKL 241
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 114/247 (46%), Gaps = 33/247 (13%)
Query: 113 RRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL 172
R A FE+I +GQG + V KA++ L + A+KK+R E + + E+++L L
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASL 59
Query: 173 DHPNVIK-----------LEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVK 220
+H V++ ++ + + +L++ Y E+ L L S + +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD------------ 268
Q+L L + H+ G++HRD+K N+ ID+ +KI DFGLA
Sbjct: 120 RLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 269 -PNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQ 327
P +TS + T Y E+L G Y +D++S G I E+ I P T +E+
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM-----IYPFSTGMER 234
Query: 328 LHKIYKL 334
++ + KL
Sbjct: 235 VNILKKL 241
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I IG G++ V K M TG A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +K+ADFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 123/285 (43%), Gaps = 42/285 (14%)
Query: 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLE 181
+ IG+G++ V A T A KK+ E V +EI I++ LDHPN+I+L
Sbjct: 32 NTIGRGSWGEVKIAVQKGTRIRRAAKKI--PKYFVEDVDRFKQEIEIMKSLDHPNIIRL- 88
Query: 182 GLVTSRMSCSLYLVFHYMEHDLAGLAASPEVK---FTEPQVKCYMHQLLSGLEHCHNNGV 238
T + +YLV ME G V F E M +LS + +CH V
Sbjct: 89 -YETFEDNTDIYLV---MELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV 144
Query: 239 LHRDIKGSNLLI---DDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATD 295
HRD+K N L D LK+ DFGLA+ F P M ++V T +Y P++L G
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--MRTKVGTPYYVSPQVLEGL-- 200
Query: 296 YGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFK 355
YG D WSAG ++ LL G P T+ E + KI + + E+ W
Sbjct: 201 YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDW------------ 248
Query: 356 PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSE 400
+ P + LI LL P +R+T+ AL E
Sbjct: 249 -------------LNVSPQAESLIRRLLTKSPKQRITSLQALEHE 280
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 123/285 (43%), Gaps = 42/285 (14%)
Query: 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLE 181
+ IG+G++ V A T A KK+ E V +EI I++ LDHPN+I+L
Sbjct: 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKI--PKYFVEDVDRFKQEIEIMKSLDHPNIIRL- 71
Query: 182 GLVTSRMSCSLYLVFHYMEHDLAGLAASPEVK---FTEPQVKCYMHQLLSGLEHCHNNGV 238
T + +YLV ME G V F E M +LS + +CH V
Sbjct: 72 -YETFEDNTDIYLV---MELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV 127
Query: 239 LHRDIKGSNLLI---DDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATD 295
HRD+K N L D LK+ DFGLA+ F P M ++V T +Y P++L G
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--MRTKVGTPYYVSPQVLEGL-- 183
Query: 296 YGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFK 355
YG D WSAG ++ LL G P T+ E + KI + + E+ W
Sbjct: 184 YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDW------------ 231
Query: 356 PREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSE 400
+ P + LI LL P +R+T+ AL E
Sbjct: 232 -------------LNVSPQAESLIRRLLTKSPKQRITSLQALEHE 263
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 7/220 (3%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTG---KIVALKKVRFDNLEPESVKFMAREILILRRLD 173
FE + +GQG++ V+ K + ++ A+K ++ L+ E IL ++
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
HP ++KL + LYL+ ++ S EV FTE VK Y+ +L L+H
Sbjct: 85 HPFIVKLH--YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G+++RD+K N+L+D++G +K+ DFGL+ +H+ S T+ Y PE ++
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPE-VVNR 200
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYK 333
+ D WS G ++ E+L G G+ E + I K
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK 240
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 7/220 (3%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTG---KIVALKKVRFDNLEPESVKFMAREILILRRLD 173
FE + +GQG++ V+ K + ++ A+K ++ L+ E IL ++
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
HP ++KL + LYL+ ++ S EV FTE VK Y+ +L L+H
Sbjct: 85 HPFIVKLH--YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G+++RD+K N+L+D++G +K+ DFGL+ +H+ S T+ Y PE ++
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPE-VVNR 200
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYK 333
+ D WS G ++ E+L G G+ E + I K
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK 240
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 130/287 (45%), Gaps = 38/287 (13%)
Query: 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEP-ESVKFMAREILILRRLDHPNVIKL 180
D +G GT+ V K LTG VA+K + + + V + REI L+ HP++IKL
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 181 EGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLH 240
++++ +++V Y+ + E + + Q+LSG+++CH + V+H
Sbjct: 82 YQVIST--PSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVH 139
Query: 241 RDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGV 300
RD+K N+L+D KIADFGL++ + + Y PE++ G G V
Sbjct: 140 RDLKPENVLLDAHMNAKIADFGLSNMMSDGEF--LRXSCGSPNYAAPEVISGRLYAGPEV 197
Query: 301 DLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPY 360
D+WS+G IL LL G +P + +P TLFK
Sbjct: 198 DIWSSGVILYALLCG--TLP----------------------FDDDHVP--TLFK----- 226
Query: 361 KRC--IQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIFQD 405
K C I T + PS + L++ +L +DP +R T E QD
Sbjct: 227 KICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD 273
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 7/220 (3%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTG---KIVALKKVRFDNLEPESVKFMAREILILRRLD 173
FE + +GQG++ V+ K + ++ A+K ++ L+ E IL ++
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
HP ++KL + LYL+ ++ S EV FTE VK Y+ +L L+H
Sbjct: 86 HPFIVKLH--YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 143
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ G+++RD+K N+L+D++G +K+ DFGL+ +H+ S T+ Y PE ++
Sbjct: 144 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPE-VVNR 201
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYK 333
+ D WS G ++ E+L G G+ E + I K
Sbjct: 202 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK 241
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 128/294 (43%), Gaps = 32/294 (10%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
++ +++G+G +S V + +L G+ A K + L + + RE I R L HPN+
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 178 IKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNG 237
++L ++ YL+F + ++E + Q+L + HCH G
Sbjct: 84 VRLHDSISE--EGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 141
Query: 238 VLHRDIKGSNLLIDDD---GVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
V+HRD+K NLL+ +K+ADFGLA + + T Y PE +L
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYLSPE-VLRKD 199
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLF 354
YG VDLW+ G IL LL G P E H++Y+ + + ++ P+
Sbjct: 200 PYGKPVDLWACGVILYILLVGYPPFWD----EDQHRLYQQIKAGAYDF------PSP--- 246
Query: 355 KPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIFQDRTL 408
+ P + LI +L I+P++R+TA AL I T+
Sbjct: 247 ------------EWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTV 288
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 16/221 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K M TG A+K + + ++ + ++ E IL+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLW----YRPPELL 290
+ +++RD+K NLLID G +++ DFG A + R TL Y PE++
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWTLCGTPEYLAPEII 211
Query: 291 LGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
L + Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 212 L-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 129/304 (42%), Gaps = 42/304 (13%)
Query: 113 RRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL 172
R D ++ +++G+G +S V + + A K + L + + RE I R L
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLL 87
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPE-----VKFTEPQVKCYMHQLL 227
HPN+++L ++ FHY+ DL E ++E +HQ+L
Sbjct: 88 KHPNIVRLHDSISEEG-------FHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQIL 140
Query: 228 SGLEHCHNNGVLHRDIKGSNLLIDDD---GVLKIADFGLASFFDPNHKHPMTSRVVTLWY 284
+ H H + ++HRD+K NLL+ +K+ADFGLA + T Y
Sbjct: 141 ESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ-GEQQAWFGFAGTPGY 199
Query: 285 RPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344
PE +L YG VD+W+ G IL LL G P E HK+Y+ + + ++
Sbjct: 200 LSPE-VLRKDPYGKPVDIWACGVILYILLVGYPPFWD----EDQHKLYQQIKAGAYDF-- 252
Query: 345 KSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIFQ 404
P+ + P + LI +L I+PA+R+TA AL + Q
Sbjct: 253 ----PSP---------------EWDTVTPEAKNLINQMLTINPAKRITADQALKHPWVCQ 293
Query: 405 DRTL 408
T+
Sbjct: 294 RSTV 297
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 18/211 (8%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D +E I ++G G + VYKA++ T + A K + D E ++ EI IL DHP
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDYMVEIDILASCDHP 94
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASP-----EVKFTEPQVKCYMHQLLSGL 230
N++KL L +L+++ + AG A E TE Q++ Q L L
Sbjct: 95 NIVKL--LDAFYYENNLWILIEF----CAGGAVDAVMLELERPLTESQIQVVCKQTLDAL 148
Query: 231 EHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELL 290
+ H+N ++HRD+K N+L DG +K+ADFG+++ + S + T ++ PE++
Sbjct: 149 NYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA-KNTRXIQRRDSFIGTPYWMAPEVV 207
Query: 291 LGATD----YGVGVDLWSAGCILAELLAGKP 317
+ T Y D+WS G L E+ +P
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 18/211 (8%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D +E I ++G G + VYKA++ T + A K + D E ++ EI IL DHP
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDYMVEIDILASCDHP 94
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASP-----EVKFTEPQVKCYMHQLLSGL 230
N++KL L +L+++ + AG A E TE Q++ Q L L
Sbjct: 95 NIVKL--LDAFYYENNLWILIEF----CAGGAVDAVMLELERPLTESQIQVVCKQTLDAL 148
Query: 231 EHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELL 290
+ H+N ++HRD+K N+L DG +K+ADFG+++ + S + T ++ PE++
Sbjct: 149 NYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA-KNTRTIQRRDSFIGTPYWMAPEVV 207
Query: 291 LGATD----YGVGVDLWSAGCILAELLAGKP 317
+ T Y D+WS G L E+ +P
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 90/163 (55%), Gaps = 7/163 (4%)
Query: 164 REILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVK-FTEPQVKCY 222
+EI IL++LDHPNV+KL ++ LY+VF + + P +K +E Q + Y
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQ--GPVMEVPTLKPLSEDQARFY 142
Query: 223 MHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTL 282
L+ G+E+ H ++HRDIK SNLL+ +DG +KIADFG+++ F + +++ V T
Sbjct: 143 FQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL-LSNTVGTP 201
Query: 283 WYRPPELLLGATDY--GVGVDLWSAGCILAELLAGK-PIMPGR 322
+ PE L G +D+W+ G L + G+ P M R
Sbjct: 202 AFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 6/200 (3%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
F K++KIG+G++ V+K D T K+VA+K + + E + ++ + +EI +L + D P V
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYV 67
Query: 178 IKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNG 237
K G + L+++ Y+ A P E Q+ + ++L GL++ H+
Sbjct: 68 TKYYG--SYLKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEK 124
Query: 238 VLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYG 297
+HRDIK +N+L+ + G +K+ADFG+A T W P ++ + Y
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE--VIKQSAYD 182
Query: 298 VGVDLWSAGCILAELLAGKP 317
D+WS G EL G+P
Sbjct: 183 SKADIWSLGITAIELARGEP 202
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 6/200 (3%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
F K++KIG+G++ V+K D T K+VA+K + + E + ++ + +EI +L + D P V
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYV 87
Query: 178 IKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNG 237
K G + L+++ Y+ A P E Q+ + ++L GL++ H+
Sbjct: 88 TKYYG--SYLKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEK 144
Query: 238 VLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYG 297
+HRDIK +N+L+ + G +K+ADFG+A T W P ++ + Y
Sbjct: 145 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE--VIKQSAYD 202
Query: 298 VGVDLWSAGCILAELLAGKP 317
D+WS G EL G+P
Sbjct: 203 SKADIWSLGITAIELARGEP 222
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 16/221 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K M TG A+K + + ++ + ++ E IL+ ++
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 87 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 144
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLW----YRPPELL 290
+ +++RD+K NLLID G +++ DFG A + R TL Y PE++
Sbjct: 145 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWTLCGTPEYLAPEII 196
Query: 291 LGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
L + Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 197 L-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 236
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 135/288 (46%), Gaps = 32/288 (11%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
+E + IG G ++ V A +LTG++VA+K + + L + + + EI L+ L H ++
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPR-IKTEIEALKNLRHQHI 70
Query: 178 IKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNG 237
+L ++ + + +++V Y + + +E + + Q++S + + H+ G
Sbjct: 71 CQLYHVLET--ANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQG 128
Query: 238 VLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYG 297
HRD+K NLL D+ LK+ DFGL + N + + + +L Y PEL+ G + G
Sbjct: 129 YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLG 188
Query: 298 VGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPR 357
D+WS G +L L+ G +P + + + +YK K+ P
Sbjct: 189 SEADVWSMGILLYVLMCG--FLP--FDDDNVMALYK-------------KIMRGKYDVP- 230
Query: 358 EPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIFQD 405
K PSS+ L++ +L +DP +R++ LN I QD
Sbjct: 231 -----------KWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQD 267
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 13/227 (5%)
Query: 114 RADSFEKIDKIGQGTYSNVYKAKDML---TGKIVALKKVRFDNL--EPESVKFMAREILI 168
R + FE + +G+G Y V++ + + TGKI A+K ++ + + E I
Sbjct: 15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI 74
Query: 169 LRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLS 228
L + HP ++ L + + LYL+ Y+ + E F E Y+ ++
Sbjct: 75 LEEVKHPFIVDL--IYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM 132
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA--SFFDPNHKHPMTSRVVTLWYRP 286
L H H G+++RD+K N++++ G +K+ DFGL S D H T+ Y
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCG---TIEYMA 189
Query: 287 PELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYK 333
PE+L+ + + VD WS G ++ ++L G P G + + KI K
Sbjct: 190 PEILM-RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK 235
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 129/299 (43%), Gaps = 32/299 (10%)
Query: 113 RRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL 172
R + ++ +++G+G +S V + +L G+ A + L + + RE I R L
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL 67
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
HPN+++L ++ YL+F + ++E + Q+L + H
Sbjct: 68 KHPNIVRLHDSISE--EGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH 125
Query: 233 CHNNGVLHRDIKGSNLLIDDD---GVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPEL 289
CH GV+HR++K NLL+ +K+ADFGLA + + T Y PE
Sbjct: 126 CHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYLSPE- 183
Query: 290 LLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLP 349
+L YG VDLW+ G IL LL G P E H++Y+ + + ++ P
Sbjct: 184 VLRKDPYGKPVDLWACGVILYILLVGYPPFWD----EDQHRLYQQIKAGAYDF------P 233
Query: 350 NATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIFQDRTL 408
+ + P + LI +L I+P++R+TA AL I T+
Sbjct: 234 SP---------------EWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTV 277
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 107/217 (49%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K M TG A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y +F+EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NL+ID G +K+ DFGLA K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGLAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 13/227 (5%)
Query: 114 RADSFEKIDKIGQGTYSNVYKAKDML---TGKIVALKKVRFDNL--EPESVKFMAREILI 168
R + FE + +G+G Y V++ + + TGKI A+K ++ + + E I
Sbjct: 15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI 74
Query: 169 LRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLS 228
L + HP ++ L + + LYL+ Y+ + E F E Y+ ++
Sbjct: 75 LEEVKHPFIVDL--IYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM 132
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA--SFFDPNHKHPMTSRVVTLWYRP 286
L H H G+++RD+K N++++ G +K+ DFGL S D H T+ Y
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCG---TIEYMA 189
Query: 287 PELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYK 333
PE+L+ + + VD WS G ++ ++L G P G + + KI K
Sbjct: 190 PEILM-RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK 235
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 24/214 (11%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D +E I ++G G + VYKA++ T + A K + D E ++ EI IL DHP
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDYMVEIDILASCDHP 94
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASP-----EVKFTEPQVKCYMHQLLSGL 230
N++KL L +L+++ + AG A E TE Q++ Q L L
Sbjct: 95 NIVKL--LDAFYYENNLWILIEF----CAGGAVDAVMLELERPLTESQIQVVCKQTLDAL 148
Query: 231 EHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR---VVTLWYRPP 287
+ H+N ++HRD+K N+L DG +K+ADFG+++ + + R + T ++ P
Sbjct: 149 NYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA----KNTRXIQRRDXFIGTPYWMAP 204
Query: 288 ELLLGATD----YGVGVDLWSAGCILAELLAGKP 317
E+++ T Y D+WS G L E+ +P
Sbjct: 205 EVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K M TG A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K M TG A+K + + ++ + ++ E IL+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 214
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K M TG A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K M TG A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K M TG A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 122/280 (43%), Gaps = 38/280 (13%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
+G+G ++ ++ D T ++ A K V + L+P + M+ EI I R L H +V+ G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
+ +++V TEP+ + Y+ Q++ G ++ H N V+HRD
Sbjct: 85 FFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 243 IKGSNLLIDDDGVLKIADFGLASF--FDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGV 300
+K NL +++D +KI DFGLA+ +D K + T Y PE +L + V
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCG---TPNYIAPE-VLSKKGHSFEV 198
Query: 301 DLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPY 360
D+WS GCI+ LL GKP E +I K EY +P
Sbjct: 199 DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK------NEY----SIP----------- 237
Query: 361 KRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSE 400
K P + LI+ +L DP R T LN E
Sbjct: 238 --------KHINPVAASLIQKMLQTDPTARPTINELLNDE 269
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 106/201 (52%), Gaps = 8/201 (3%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
F K++KIG+G++ V+K D T K+VA+K + + E + ++ + +EI +L + D P V
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYV 82
Query: 178 IKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNG 237
K G + L+++ Y+ A P E Q+ + ++L GL++ H+
Sbjct: 83 TKYYG--SYLKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEK 139
Query: 238 VLHRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHKHPMTSRVVTLWYRPPELLLGATDY 296
+HRDIK +N+L+ + G +K+ADFG+A D K V T ++ PE ++ + Y
Sbjct: 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NXFVGTPFWMAPE-VIKQSAY 196
Query: 297 GVGVDLWSAGCILAELLAGKP 317
D+WS G EL G+P
Sbjct: 197 DSKADIWSLGITAIELARGEP 217
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 124/286 (43%), Gaps = 42/286 (14%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALK---KVRF---DNLEPESVKFMAREILILRRLDHPNV 177
+G G V A + T K VA+K K +F E + + EI IL++L+HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 178 IKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNG 237
IK++ + Y+V ME + E K Y +Q+L +++ H NG
Sbjct: 78 IKIKNFFDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG 134
Query: 238 VLHRDIKGSNLLI---DDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELL--LG 292
++HRD+K N+L+ ++D ++KI DFG + M + T Y PE+L +G
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVG 192
Query: 293 ATDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351
Y VD WS G IL L+G P RT+V +I S +Y
Sbjct: 193 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI------TSGKY--------- 237
Query: 352 TLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
I E + + +L L++ LL +DP R T AL
Sbjct: 238 ----------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 273
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 106/201 (52%), Gaps = 8/201 (3%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
F K++KIG+G++ V+K D T K+VA+K + + E + ++ + +EI +L + D P V
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYV 67
Query: 178 IKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNG 237
K G + L+++ Y+ A P E Q+ + ++L GL++ H+
Sbjct: 68 TKYYG--SYLKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEK 124
Query: 238 VLHRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHKHPMTSRVVTLWYRPPELLLGATDY 296
+HRDIK +N+L+ + G +K+ADFG+A D K V T ++ PE ++ + Y
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NXFVGTPFWMAPE-VIKQSAY 181
Query: 297 GVGVDLWSAGCILAELLAGKP 317
D+WS G EL G+P
Sbjct: 182 DSKADIWSLGITAIELARGEP 202
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 25/212 (11%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
F++I+ IG G + V+KAK + GK +K+V+++N + E RE+ L +LDH N+
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE------REVKALAKLDHVNI 66
Query: 178 IKLEGL---------VTSRMSC--SLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCY--- 222
+ G +S+ S +F ME D L E + E K
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 223 -MHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVT 281
Q+ G+++ H+ +++RD+K SN+ + D +KI DFGL + + K + T
Sbjct: 127 LFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKG--T 184
Query: 282 LWYRPPELLLGATDYGVGVDLWSAGCILAELL 313
L Y PE + + DYG VDL++ G ILAELL
Sbjct: 185 LRYMSPE-QISSQDYGKEVDLYALGLILAELL 215
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K M TG A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y +F+EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NL+ID G +K+ DFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 10/202 (4%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
F K+++IG+G++ V+K D T ++VA+K + + E E + +EI +L + D V
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIED-IQQEITVLSQCDSSYV 83
Query: 178 IKLEGLVTSRMSCSLYLVFHYME--HDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
K G + L+++ Y+ L L A P F E Q+ + ++L GL++ H+
Sbjct: 84 TKYYG--SYLKGSKLWIIMEYLGGGSALDLLRAGP---FDEFQIATMLKEILKGLDYLHS 138
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATD 295
+HRDIK +N+L+ + G +K+ADFG+A T W P ++ +
Sbjct: 139 EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE--VIQQSA 196
Query: 296 YGVGVDLWSAGCILAELLAGKP 317
Y D+WS G EL G+P
Sbjct: 197 YDSKADIWSLGITAIELAKGEP 218
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 131/311 (42%), Gaps = 37/311 (11%)
Query: 104 GEALNGWIPRRADS---FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVK 160
GE+ + W + D FE + +G G +S V A++ TGK+ A+K + L+ +
Sbjct: 7 GESSSSWKKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESS 66
Query: 161 FMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
+ EI +LR++ H N++ LE + S LYLV + + +TE
Sbjct: 67 -IENEIAVLRKIKHENIVALEDIYES--PNHLYLVMQLVSGGELFDRIVEKGFYTEKDAS 123
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLI---DDDGVLKIADFGLASFFDPNHKHPMTS 277
+ Q+L + + H G++HRD+K NLL D++ + I+DFGL+ M++
Sbjct: 124 TLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMST 181
Query: 278 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGS 337
T Y PE +L Y VD WS G I LL G P + + +I K
Sbjct: 182 ACGTPGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILK---- 236
Query: 338 PSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
++ PY I ++ KDF I L+ DP +R T A
Sbjct: 237 --------------AEYEFDSPYWDDISDSAKDF-------IRNLMEKDPNKRYTCEQAA 275
Query: 398 NSEVIFQDRTL 408
I D L
Sbjct: 276 RHPWIAGDTAL 286
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 122/280 (43%), Gaps = 38/280 (13%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
+G+G ++ ++ D T ++ A K V + L+P + M+ EI I R L H +V+ G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
+ +++V TEP+ + Y+ Q++ G ++ H N V+HRD
Sbjct: 85 FFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 243 IKGSNLLIDDDGVLKIADFGLASF--FDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGV 300
+K NL +++D +KI DFGLA+ +D K + T Y PE +L + V
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCG---TPNYIAPE-VLSKKGHSFEV 198
Query: 301 DLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPY 360
D+WS GCI+ LL GKP E +I K EY +P
Sbjct: 199 DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK------NEY----SIP----------- 237
Query: 361 KRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSE 400
K P + LI+ +L DP R T LN E
Sbjct: 238 --------KHINPVAASLIQKMLQTDPTARPTINELLNDE 269
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 124/286 (43%), Gaps = 42/286 (14%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALK---KVRF---DNLEPESVKFMAREILILRRLDHPNV 177
+G G V A + T K VA+K K +F E + + EI IL++L+HP +
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 178 IKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNG 237
IK++ + Y+V ME + E K Y +Q+L +++ H NG
Sbjct: 77 IKIKNFFDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG 133
Query: 238 VLHRDIKGSNLLI---DDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELL--LG 292
++HRD+K N+L+ ++D ++KI DFG + M + T Y PE+L +G
Sbjct: 134 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVG 191
Query: 293 ATDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351
Y VD WS G IL L+G P RT+V +I S +Y
Sbjct: 192 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI------TSGKY--------- 236
Query: 352 TLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
I E + + +L L++ LL +DP R T AL
Sbjct: 237 ----------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 272
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K M TG A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y +F+EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NL+ID G +++ DFGLA K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGLAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 122/280 (43%), Gaps = 38/280 (13%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
+G+G ++ ++ D T ++ A K V + L+P + M+ EI I R L H +V+ G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
+ +++V TEP+ + Y+ Q++ G ++ H N V+HRD
Sbjct: 89 FFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 146
Query: 243 IKGSNLLIDDDGVLKIADFGLASF--FDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGV 300
+K NL +++D +KI DFGLA+ +D K + T Y PE +L + V
Sbjct: 147 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCG---TPNYIAPE-VLSKKGHSFEV 202
Query: 301 DLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPY 360
D+WS GCI+ LL GKP E +I K EY +P
Sbjct: 203 DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK------NEY----SIP----------- 241
Query: 361 KRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSE 400
K P + LI+ +L DP R T LN E
Sbjct: 242 --------KHINPVAASLIQKMLQTDPTARPTINELLNDE 273
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 126/294 (42%), Gaps = 42/294 (14%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALK---KVRF---DNLEPESVKFMAREILIL 169
D + +G G V A + T K VA+K K +F E + + EI IL
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 170 RRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSG 229
++L+HP +IK++ + Y+V ME + E K Y +Q+L
Sbjct: 76 KKLNHPCIIKIKNFFDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 132
Query: 230 LEHCHNNGVLHRDIKGSNLLI---DDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRP 286
+++ H NG++HRD+K N+L+ ++D ++KI DFG + M + T Y
Sbjct: 133 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLA 190
Query: 287 PELL--LGATDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPSEEYW 343
PE+L +G Y VD WS G IL L+G P RT+V +I S +Y
Sbjct: 191 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI------TSGKY- 243
Query: 344 KKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
I E + + +L L++ LL +DP R T AL
Sbjct: 244 ------------------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 279
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 124/286 (43%), Gaps = 42/286 (14%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALK---KVRF---DNLEPESVKFMAREILILRRLDHPNV 177
+G G V A + T K VA+K K +F E + + EI IL++L+HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 178 IKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNG 237
IK++ + Y+V ME + E K Y +Q+L +++ H NG
Sbjct: 78 IKIKNFFDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG 134
Query: 238 VLHRDIKGSNLLI---DDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELL--LG 292
++HRD+K N+L+ ++D ++KI DFG + M + T Y PE+L +G
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVG 192
Query: 293 ATDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351
Y VD WS G IL L+G P RT+V +I S +Y
Sbjct: 193 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI------TSGKY--------- 237
Query: 352 TLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
I E + + +L L++ LL +DP R T AL
Sbjct: 238 ----------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 273
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 22/268 (8%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFD---NLEPESVKFM----AREILI 168
+++E + +G+G S V + T K A+K + + E V+ + +E+ I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 169 LRRLD-HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLL 227
LR++ HPN+I+L+ T + +LVF M+ + +V +E + + M LL
Sbjct: 77 LRKVSGHPNIIQLKD--TYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 134
Query: 228 SGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ H ++HRD+K N+L+DDD +K+ DFG + DP K + S T Y P
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LRSVCGTPSYLAP 192
Query: 288 ELLLGATD-----YGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI----YKLCGSP 338
E++ + + YG VD+WS G I+ LLAG P R ++ L I Y+ GSP
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQF-GSP 251
Query: 339 SEEYWKKSKLPNATLFKPREPYKRCIQE 366
+ + + + F +P KR E
Sbjct: 252 EWDDYSDTVKDLVSRFLVVQPQKRYTAE 279
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 124/286 (43%), Gaps = 42/286 (14%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALK---KVRF---DNLEPESVKFMAREILILRRLDHPNV 177
+G G V A + T K VA+K K +F E + + EI IL++L+HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 178 IKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNG 237
IK++ + Y+V ME + E K Y +Q+L +++ H NG
Sbjct: 78 IKIKNFFDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG 134
Query: 238 VLHRDIKGSNLLI---DDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELL--LG 292
++HRD+K N+L+ ++D ++KI DFG + M + T Y PE+L +G
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVG 192
Query: 293 ATDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351
Y VD WS G IL L+G P RT+V +I S +Y
Sbjct: 193 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI------TSGKY--------- 237
Query: 352 TLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
I E + + +L L++ LL +DP R T AL
Sbjct: 238 ----------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 273
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 141/312 (45%), Gaps = 53/312 (16%)
Query: 108 NGWIPRRA---------DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV---RFDNLE 155
+G +PR + D +E + IG+G +S V + + TG+ A+K V +F +
Sbjct: 9 SGLVPRGSMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSP 68
Query: 156 PESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLA------AS 209
S + + RE I L HP++++L L T LY+VF +M D A L A
Sbjct: 69 GLSTEDLKREASICHMLKHPHIVEL--LETYSSDGMLYMVFEFM--DGADLCFEIVKRAD 124
Query: 210 PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLI---DDDGVLKIADFGLASF 266
++E YM Q+L L +CH+N ++HRD+K +L+ ++ +K+ FG+A
Sbjct: 125 AGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ 184
Query: 267 FDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVE 326
+ RV T + PE ++ YG VD+W G IL LL+G +P E
Sbjct: 185 LGES-GLVAGGRVGTPHFMAPE-VVKREPYGKPVDVWGCGVILFILLSG--CLPFYGTKE 240
Query: 327 QLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAID 386
+L + + PR+ I E+ KD L+ +L +D
Sbjct: 241 RLF---------------EGIIKGKYKMNPRQWSH--ISESAKD-------LVRRMLMLD 276
Query: 387 PAERLTATVALN 398
PAER+T ALN
Sbjct: 277 PAERITVYEALN 288
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 9/211 (4%)
Query: 107 LNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREI 166
L+ I +D ++ + IG G + +D LT ++VA+K + E+V+ REI
Sbjct: 11 LDMPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQ---REI 67
Query: 167 LILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQL 226
+ R L HPN+++ + ++ + L ++ Y +F+E + + + QL
Sbjct: 68 INHRSLRHPNIVRFKEVILT--PTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQL 125
Query: 227 LSGLEHCHNNGVLHRDIKGSNLLIDDDGV--LKIADFGLASFFDPNHKHPMTSRVVTLWY 284
LSG+ +CH+ + HRD+K N L+D LKI DFG + H P S V T Y
Sbjct: 126 LSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSVLHSQP-KSTVGTPAY 183
Query: 285 RPPELLLGATDYGVGVDLWSAGCILAELLAG 315
PE+LL G D+WS G L +L G
Sbjct: 184 IAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 122/280 (43%), Gaps = 38/280 (13%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
+G+G ++ ++ D T ++ A K V + L+P + M+ EI I R L H +V+ G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
+ +++V TEP+ + Y+ Q++ G ++ H N V+HRD
Sbjct: 83 FFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 140
Query: 243 IKGSNLLIDDDGVLKIADFGLASF--FDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGV 300
+K NL +++D +KI DFGLA+ +D K + T Y PE +L + V
Sbjct: 141 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCG---TPNYIAPE-VLSKKGHSFEV 196
Query: 301 DLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPY 360
D+WS GCI+ LL GKP E +I K EY +P
Sbjct: 197 DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK------NEY----SIP----------- 235
Query: 361 KRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSE 400
K P + LI+ +L DP R T LN E
Sbjct: 236 --------KHINPVAASLIQKMLQTDPTARPTINELLNDE 267
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K M TG A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K M TG A+K + + ++ + ++ E IL+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F EP + Y Q++ E+ H
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 159
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 214
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 122/280 (43%), Gaps = 38/280 (13%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
+G+G ++ ++ D T ++ A K V + L+P + M+ EI I R L H +V+ G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
+ +++V TEP+ + Y+ Q++ G ++ H N V+HRD
Sbjct: 107 FFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 164
Query: 243 IKGSNLLIDDDGVLKIADFGLASF--FDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGV 300
+K NL +++D +KI DFGLA+ +D K + T Y PE +L + V
Sbjct: 165 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCG---TPNYIAPE-VLSKKGHSFEV 220
Query: 301 DLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPY 360
D+WS GCI+ LL GKP E +I K EY +P
Sbjct: 221 DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK------NEY----SIP----------- 259
Query: 361 KRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSE 400
K P + LI+ +L DP R T LN E
Sbjct: 260 --------KHINPVAASLIQKMLQTDPTARPTINELLNDE 291
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 104/196 (53%), Gaps = 9/196 (4%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
KIG+G+ V A + TGK VA+KK+ D + + + + E++I+R H NV+ +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKM--DLRKQQRRELLFNEVVIMRDYHHDNVVDMYS 109
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
+ + L++V ++E A + E Q+ +L L + HN GV+HRD
Sbjct: 110 --SYLVGDELWVVMEFLEGG-ALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRD 166
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGATDYGVGVD 301
IK ++L+ DG +K++DFG + + + P +V T ++ PE ++ YG VD
Sbjct: 167 IKSDSILLTSDGRIKLSDFGFCA--QVSKEVPKRKXLVGTPYWMAPE-VISRLPYGTEVD 223
Query: 302 LWSAGCILAELLAGKP 317
+WS G ++ E++ G+P
Sbjct: 224 IWSLGIMVIEMIDGEP 239
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K M TG A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 122/280 (43%), Gaps = 38/280 (13%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
+G+G ++ ++ D T ++ A K V + L+P + M+ EI I R L H +V+ G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
+ +++V TEP+ + Y+ Q++ G ++ H N V+HRD
Sbjct: 109 FFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 166
Query: 243 IKGSNLLIDDDGVLKIADFGLASF--FDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGV 300
+K NL +++D +KI DFGLA+ +D K + T Y PE +L + V
Sbjct: 167 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCG---TPNYIAPE-VLSKKGHSFEV 222
Query: 301 DLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPY 360
D+WS GCI+ LL GKP E +I K EY +P
Sbjct: 223 DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK------NEY----SIP----------- 261
Query: 361 KRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSE 400
K P + LI+ +L DP R T LN E
Sbjct: 262 --------KHINPVAASLIQKMLQTDPTARPTINELLNDE 293
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 105/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K M TG A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y +F EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NL+ID G +K+ DFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 124/286 (43%), Gaps = 42/286 (14%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALK---KVRF---DNLEPESVKFMAREILILRRLDHPNV 177
+G G V A + T K VA++ K +F E + + EI IL++L+HP +
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202
Query: 178 IKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNG 237
IK++ + Y+V ME + E K Y +Q+L +++ H NG
Sbjct: 203 IKIKNFFDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG 259
Query: 238 VLHRDIKGSNLLI---DDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELL--LG 292
++HRD+K N+L+ ++D ++KI DFG + M + T Y PE+L +G
Sbjct: 260 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVG 317
Query: 293 ATDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351
Y VD WS G IL L+G P RT+V +I S +Y
Sbjct: 318 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI------TSGKY--------- 362
Query: 352 TLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
I E + + +L L++ LL +DP R T AL
Sbjct: 363 ----------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 398
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 117/243 (48%), Gaps = 31/243 (12%)
Query: 113 RRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL 172
R FE I +G+G + V++AK+ + A+K++R N E K M RE+ L +L
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVM-REVKALAKL 60
Query: 173 DHPNVIK-----LEGLVTSRMSCSLYLVFHYMEHDLAGLA-----ASPEVKFTEPQVKCY 222
+HP +++ LE T ++ S V+ Y++ L + E +
Sbjct: 61 EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120
Query: 223 MH---QLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH-----P 274
+H Q+ +E H+ G++HRD+K SN+ D V+K+ DFGL + D + + P
Sbjct: 121 LHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 275 M------TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQL 328
M T +V T Y PE + G + Y VD++S G IL ELL P T++E++
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGNS-YSHKVDIFSLGLILFELL-----YPFSTQMERV 234
Query: 329 HKI 331
+
Sbjct: 235 RTL 237
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 14/204 (6%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
F K+D+IG+G++ VYK D T ++VA+K + + E E + +EI +L + D P +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIED-IQQEITVLSQCDSPYI 79
Query: 178 IKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVK---FTEPQVKCYMHQLLSGLEHCH 234
+ G + S L+++ Y L G +A +K E + + ++L GL++ H
Sbjct: 80 TRYFG--SYLKSTKLWIIMEY----LGGGSALDLLKPGPLEETYIATILREILKGLDYLH 133
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
+ +HRDIK +N+L+ + G +K+ADFG+A D K V T ++ PE ++
Sbjct: 134 SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR--NXFVGTPFWMAPE-VIKQ 190
Query: 294 TDYGVGVDLWSAGCILAELLAGKP 317
+ Y D+WS G EL G+P
Sbjct: 191 SAYDFKADIWSLGITAIELAKGEP 214
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 124/286 (43%), Gaps = 42/286 (14%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALK---KVRF---DNLEPESVKFMAREILILRRLDHPNV 177
+G G V A + T K VA++ K +F E + + EI IL++L+HP +
Sbjct: 157 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 216
Query: 178 IKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNG 237
IK++ + Y+V ME + E K Y +Q+L +++ H NG
Sbjct: 217 IKIKNFFDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG 273
Query: 238 VLHRDIKGSNLLI---DDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELL--LG 292
++HRD+K N+L+ ++D ++KI DFG + M + T Y PE+L +G
Sbjct: 274 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVG 331
Query: 293 ATDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNA 351
Y VD WS G IL L+G P RT+V +I S +Y
Sbjct: 332 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI------TSGKY--------- 376
Query: 352 TLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
I E + + +L L++ LL +DP R T AL
Sbjct: 377 ----------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 412
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 33/284 (11%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D ++ ++++G G + V++ + TG++ K + + P + EI I+ +L HP
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFI--NTPYPLDKYTVKNEISIMNQLHHP 108
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
+I L + L L F +L A+ + K +E +V YM Q GL+H H
Sbjct: 109 KLINLHDAFEDKYEMVLILEF-LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE 167
Query: 236 NGVLHRDIKGSNLLIDDDGV--LKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
+ ++H DIK N++ + +KI DFGLA+ +P+ +T+ T + PE ++
Sbjct: 168 HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT--ATAEFAAPE-IVDR 224
Query: 294 TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATL 353
G D+W+ G + LL+G G ++E L + K C +E
Sbjct: 225 EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV-KRCDWEFDE------------ 271
Query: 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
+ F P + I+ LL +P +RLT AL
Sbjct: 272 ------------DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDAL 303
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 114/225 (50%), Gaps = 29/225 (12%)
Query: 112 PRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRR 171
P + + + K+G G +S V+ AKDM+ VA+K VR D + E+ + EI +L+R
Sbjct: 15 PYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAE---DEIKLLQR 71
Query: 172 LDHPNVIKLEGLVTSRM-------------SCSLYLVFHYMEHDLAGLAASPEVK-FTEP 217
++ + K + + + + + +VF + +L L E +
Sbjct: 72 VNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLI 131
Query: 218 QVKCYMHQLLSGLEHCHNN-GVLHRDIKGSNLLI------DDDGVLKIADFGLASFFDPN 270
VK QLL GL++ H G++H DIK N+L+ ++ +KIAD G A ++D +
Sbjct: 132 YVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191
Query: 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAG 315
+ T+ + T YR PE+LLGA +G G D+WS C++ EL+ G
Sbjct: 192 Y----TNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITG 231
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 135/295 (45%), Gaps = 44/295 (14%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV---RFDNLEPESVKFMAREILILRRL 172
D +E + IG+G +S V + + TG+ A+K V +F + S + + RE I L
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLA------ASPEVKFTEPQVKCYMHQL 226
HP++++L L T LY+VF +M D A L A ++E YM Q+
Sbjct: 84 KHPHIVEL--LETYSSDGMLYMVFEFM--DGADLCFEIVKRADAGFVYSEAVASHYMRQI 139
Query: 227 LSGLEHCHNNGVLHRDIKGSNLLI---DDDGVLKIADFGLASFFDPNHKHPMTSRVVTLW 283
L L +CH+N ++HRD+K +L+ ++ +K+ FG+A + RV T
Sbjct: 140 LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES-GLVAGGRVGTPH 198
Query: 284 YRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYW 343
+ PE ++ YG VD+W G IL LL+G +P E+L
Sbjct: 199 FMAPE-VVKREPYGKPVDVWGCGVILFILLSG--CLPFYGTKERLF-------------- 241
Query: 344 KKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398
+ + PR+ I E+ KD L+ +L +DPAER+T ALN
Sbjct: 242 -EGIIKGKYKMNPRQWSH--ISESAKD-------LVRRMLMLDPAERITVYEALN 286
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 114/225 (50%), Gaps = 29/225 (12%)
Query: 112 PRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRR 171
P + + + K+G G +S V+ AKDM+ VA+K VR D + E+ + EI +L+R
Sbjct: 15 PYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAE---DEIKLLQR 71
Query: 172 LDHPNVIKLEGLVTSRM-------------SCSLYLVFHYMEHDLAGLAASPEVK-FTEP 217
++ + K + + + + + +VF + +L L E +
Sbjct: 72 VNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLI 131
Query: 218 QVKCYMHQLLSGLEHCHNN-GVLHRDIKGSNLLI------DDDGVLKIADFGLASFFDPN 270
VK QLL GL++ H G++H DIK N+L+ ++ +KIAD G A ++D +
Sbjct: 132 YVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191
Query: 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAG 315
+ T+ + T YR PE+LLGA +G G D+WS C++ EL+ G
Sbjct: 192 Y----TNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITG 231
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K M TG A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y +F+EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NL+ID G +++ DFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 105/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K M TG A+K + + ++ + ++ E IL+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P + KLE + + + +LY+V Y +F+EP + Y Q++ E+ H
Sbjct: 102 PFLTKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NL+ID G +K+ DFG A K T Y PE++L +
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 214
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 105/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K M TG A+K + + ++ + ++ E IL+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P + KLE + + + +LY+V Y +F+EP + Y Q++ E+ H
Sbjct: 102 PFLTKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NL+ID G +K+ DFG A K T Y PE++L +
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 214
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 7/203 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDH 174
+ F+ + +G+GT+ V ++ TG+ A+K +R + + + V E +L+ H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 175 PNVIKLE-GLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
P + L+ T C V Y S E FTE + + Y +++S LE+
Sbjct: 65 PFLTALKYAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ V++RDIK NL++D DG +KI DFGL + M + T Y PE +L
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPE-VLED 179
Query: 294 TDYGVGVDLWSAGCILAELLAGK 316
DYG VD W G ++ E++ G+
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 7/203 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDH 174
+ F+ + +G+GT+ V ++ TG+ A+K +R + + + V E +L+ H
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 175 PNVIKLE-GLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
P + L+ T C V Y S E FTE + + Y +++S LE+
Sbjct: 68 PFLTALKYAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 124
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ V++RDIK NL++D DG +KI DFGL + M + T Y PE +L
Sbjct: 125 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPE-VLED 182
Query: 294 TDYGVGVDLWSAGCILAELLAGK 316
DYG VD W G ++ E++ G+
Sbjct: 183 NDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 106/201 (52%), Gaps = 11/201 (5%)
Query: 121 IDKI-GQGTYSNVYKAKDMLTGK---IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
IDK+ G G + V + L K VA+K ++ E + F+ E I+ + DHPN
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPN 107
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
+I+LEG+VT S + +V YME+ L + +FT Q+ + + SG+++ +
Sbjct: 108 IIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR--VVTLWYRPPELLLGA 293
G +HRD+ N+LI+ + V K++DFGLA + + + T+R + + + PE +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPE-AIAY 224
Query: 294 TDYGVGVDLWSAGCILAELLA 314
+ D+WS G +L E+++
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS 245
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 5/202 (2%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDH 174
+ F+ + +G+GT+ V ++ TG+ A+K +R + + + V E +L+ H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P + L+ + L V Y S E FTE + + Y +++S LE+ H
Sbjct: 65 PFLTALK--YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V++RDIK NL++D DG +KI DFGL + M + T Y PE +L
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPE-VLEDN 180
Query: 295 DYGVGVDLWSAGCILAELLAGK 316
DYG VD W G ++ E++ G+
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 15/213 (7%)
Query: 164 REILILRRLD-HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCY 222
+E+ ILR++ HPN+I+L+ T + +LVF M+ + +V +E + +
Sbjct: 59 KEVDILRKVSGHPNIIQLKD--TYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI 116
Query: 223 MHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTL 282
M LL + H ++HRD+K N+L+DDD +K+ DFG + DP K + T
Sbjct: 117 MRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTP 174
Query: 283 WYRPPELLLGATD-----YGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI----YK 333
Y PE++ + + YG VD+WS G I+ LLAG P R ++ L I Y+
Sbjct: 175 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ 234
Query: 334 LCGSPSEEYWKKSKLPNATLFKPREPYKRCIQE 366
GSP + + + + F +P KR E
Sbjct: 235 F-GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAE 266
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 130/272 (47%), Gaps = 31/272 (11%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD-HPNVIKLEG 182
+G+G++S K + + A+K + +E + K EI L+ + HPN++KL
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIIS-KRMEANTQK----EITALKLCEGHPNIVKLHE 73
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
+ ++ +LV + + F+E + M +L+S + H H+ GV+HRD
Sbjct: 74 VFHDQLHT--FLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRD 131
Query: 243 IKGSNLLIDDDG---VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVG 299
+K NLL D+ +KI DFG A P+++ P+ + TL Y PE LL Y
Sbjct: 132 LKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-PLKTPCFTLHYAAPE-LLNQNGYDES 189
Query: 300 VDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREP 359
DLWS G IL +L+G+ +P ++ L C S + E KK K + + E
Sbjct: 190 CDLWSLGVILYTMLSGQ--VPFQSHDRSL-----TCTS-AVEIMKKIKKGDFSF--EGEA 239
Query: 360 YKRCIQETFKDFPPSSLPLIETLLAIDPAERL 391
+K QE KD LI+ LL +DP +RL
Sbjct: 240 WKNVSQEA-KD-------LIQGLLTVDPNKRL 263
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 127/268 (47%), Gaps = 22/268 (8%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFD---NLEPESVKFM----AREILI 168
+++E + +G+G S V + T K A+K + + E V+ + +E+ I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 169 LRRLD-HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLL 227
LR++ HPN+I+L+ T + +LVF M+ + +V +E + + M LL
Sbjct: 77 LRKVSGHPNIIQLKD--TYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 134
Query: 228 SGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ H ++HRD+K N+L+DDD +K+ DFG + DP K + T Y P
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAP 192
Query: 288 ELLLGATD-----YGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI----YKLCGSP 338
E++ + + YG VD+WS G I+ LLAG P R ++ L I Y+ GSP
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQF-GSP 251
Query: 339 SEEYWKKSKLPNATLFKPREPYKRCIQE 366
+ + + + F +P KR E
Sbjct: 252 EWDDYSDTVKDLVSRFLVVQPQKRYTAE 279
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K M TG A+K + + ++ + ++ E IL+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P + KLE + + + +LY+V Y +F EP + Y Q++ E+ H
Sbjct: 102 PFLTKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 159
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NL+ID G +K+ DFG A K T Y PE++L +
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 214
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 106/201 (52%), Gaps = 11/201 (5%)
Query: 121 IDKI-GQGTYSNVYKAKDMLTGK---IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
IDK+ G G + V + L K VA+K ++ E + F+ E I+ + DHPN
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPN 78
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
+I+LEG+VT S + +V YME+ L + +FT Q+ + + SG+++ +
Sbjct: 79 IIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 136
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR--VVTLWYRPPELLLGA 293
G +HRD+ N+LI+ + V K++DFGL+ + + + T+R + + + PE +
Sbjct: 137 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAY 195
Query: 294 TDYGVGVDLWSAGCILAELLA 314
+ D+WS G +L E+++
Sbjct: 196 RKFTSASDVWSYGIVLWEVMS 216
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 105/244 (43%), Gaps = 30/244 (12%)
Query: 113 RRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL 172
R A FE+I +GQG + V KA++ L + A+KK+R E + + E+ +L L
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVXLLASL 59
Query: 173 DHPNVIKLEGLVTSRMS-----------CSLYLVFHYMEH-DLAGLAASPEVKFTEPQVK 220
+H V++ R + +L++ Y E+ L L S + +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD------------ 268
Q+L L + H+ G++HR++K N+ ID+ +KI DFGLA
Sbjct: 120 RLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 269 -PNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQ 327
P +TS + T Y E+L G Y +D +S G I E + P G V
Sbjct: 180 LPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY--PFSTGXERVNI 237
Query: 328 LHKI 331
L K+
Sbjct: 238 LKKL 241
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 106/201 (52%), Gaps = 11/201 (5%)
Query: 121 IDKI-GQGTYSNVYKAKDMLTGK---IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
IDK+ G G + V + L K VA+K ++ E + F+ E I+ + DHPN
Sbjct: 37 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPN 95
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
+I+LEG+VT S + +V YME+ L + +FT Q+ + + SG+++ +
Sbjct: 96 IIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 153
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR--VVTLWYRPPELLLGA 293
G +HRD+ N+LI+ + V K++DFGL+ + + + T+R + + + PE +
Sbjct: 154 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAY 212
Query: 294 TDYGVGVDLWSAGCILAELLA 314
+ D+WS G +L E+++
Sbjct: 213 RKFTSASDVWSYGIVLWEVMS 233
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K TG A+K + + ++ + ++ E IL+ ++
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 122 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 179
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 234
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 271
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K TG A+K + + ++ + ++ E IL+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 214
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 97/203 (47%), Gaps = 9/203 (4%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH 174
+D +E + IG G + +D + ++VA+K + E+VK REI+ R L H
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK---REIINHRSLRH 73
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++ + ++ + L +V Y +F+E + + + QL+SG+ +CH
Sbjct: 74 PNIVRFKEVILT--PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 131
Query: 235 NNGVLHRDIKGSNLLIDDDGV--LKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
V HRD+K N L+D LKI DFG + H P S V T Y PE+LL
Sbjct: 132 AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK-SSVLHSQP-KSTVGTPAYIAPEVLLK 189
Query: 293 ATDYGVGVDLWSAGCILAELLAG 315
G D+WS G L +L G
Sbjct: 190 KEYDGKVADVWSCGVTLYVMLVG 212
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 7/203 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDH 174
+ F+ + +G+GT+ V ++ TG+ A+K +R + + + V E +L+ H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 175 PNVIKLE-GLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
P + L+ T C V Y S E FTE + + Y +++S LE+
Sbjct: 65 PFLTALKYAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ V++RDIK NL++D DG +KI DFGL + M T Y PE +L
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPE-VLED 179
Query: 294 TDYGVGVDLWSAGCILAELLAGK 316
DYG VD W G ++ E++ G+
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K TG A+K + + ++ + ++ E IL+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 214
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K TG A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 106/201 (52%), Gaps = 11/201 (5%)
Query: 121 IDKI-GQGTYSNVYKAKDMLTGK---IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
IDK+ G G + V + L K VA+K ++ E + F+ E I+ + DHPN
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPN 107
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
+I+LEG+VT S + +V YME+ L + +FT Q+ + + SG+++ +
Sbjct: 108 IIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR--VVTLWYRPPELLLGA 293
G +HRD+ N+LI+ + V K++DFGL+ + + + T+R + + + PE +
Sbjct: 166 MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAY 224
Query: 294 TDYGVGVDLWSAGCILAELLA 314
+ D+WS G +L E+++
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS 245
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K TG A+K + + ++ + ++ E IL+ ++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 94 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 151
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 206
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 207 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 243
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K TG A+K + + ++ + ++ E IL+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 214
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K TG A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 7/203 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDH 174
+ F+ + +G+GT+ V ++ TG+ A+K +R + + + V E +L+ H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 175 PNVIKLE-GLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
P + L+ T C V Y S E FTE + + Y +++S LE+
Sbjct: 65 PFLTALKYAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ V++RDIK NL++D DG +KI DFGL + M T Y PE +L
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPE-VLED 179
Query: 294 TDYGVGVDLWSAGCILAELLAGK 316
DYG VD W G ++ E++ G+
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 5/195 (2%)
Query: 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEP-ESVKFMAREILILRRLDHPNVIKL 180
D +G GT+ V + LTG VA+K + + + V + REI L+ HP++IKL
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 181 EGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLH 240
++++ ++V Y+ + E + + Q+LS +++CH + V+H
Sbjct: 77 YQVIST--PTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVH 134
Query: 241 RDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGV 300
RD+K N+L+D KIADFGL++ + + + Y PE++ G G V
Sbjct: 135 RDLKPENVLLDAHMNAKIADFGLSNMMSDGEF--LRTSCGSPNYAAPEVISGRLYAGPEV 192
Query: 301 DLWSAGCILAELLAG 315
D+WS G IL LL G
Sbjct: 193 DIWSCGVILYALLCG 207
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 7/203 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDH 174
+ F+ + +G+GT+ V ++ TG+ A+K +R + + + V E +L+ H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 175 PNVIKLE-GLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
P + L+ T C V Y S E FTE + + Y +++S LE+
Sbjct: 65 PFLTALKYAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H+ V++RDIK NL++D DG +KI DFGL + M T Y PE +L
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPE-VLED 179
Query: 294 TDYGVGVDLWSAGCILAELLAGK 316
DYG VD W G ++ E++ G+
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 105/225 (46%), Gaps = 38/225 (16%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
F++I+ IG G + V+KAK + GK +++V+++N + E RE+ L +LDH N+
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE------REVKALAKLDHVNI 67
Query: 178 IKLEG----------LVTSRMSCSLY--------------LVFHYMEH-DLAGLAASPEV 212
+ G + S Y +F ME D L E
Sbjct: 68 VHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 213 KFTEPQVKCY----MHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD 268
+ E K Q+ G+++ H+ ++HRD+K SN+ + D +KI DFGL +
Sbjct: 128 RRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLK 187
Query: 269 PNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELL 313
+ K T TL Y PE + + DYG VDL++ G ILAELL
Sbjct: 188 NDGKR--TRSKGTLRYMSPE-QISSQDYGKEVDLYALGLILAELL 229
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K TG A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 106/201 (52%), Gaps = 11/201 (5%)
Query: 121 IDKI-GQGTYSNVYKAKDMLTGK---IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
IDK+ G G + V + L K VA+K ++ E + F+ E I+ + DHPN
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPN 107
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
+I+LEG+VT S + +V YME+ L + +FT Q+ + + SG+++ +
Sbjct: 108 IIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR--VVTLWYRPPELLLGA 293
G +HRD+ N+LI+ + V K++DFGL+ + + + T+R + + + PE +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAY 224
Query: 294 TDYGVGVDLWSAGCILAELLA 314
+ D+WS G +L E+++
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS 245
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K TG A+K + + ++ + ++ E IL+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y +F+EP + Y Q++ E+ H
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NL+ID G +K+ DFG A K T Y PE++L +
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 214
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 105/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K TG A+K + + ++ + ++ E I + ++
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y +F+EP + Y Q++ E+ H
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +K+ADFG A K T Y PE++L +
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 214
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 5/202 (2%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDH 174
+ F+ + +G+GT+ V ++ TG+ A+K +R + + + V E +L+ H
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P + L+ + L V Y S E FTE + + Y +++S LE+ H
Sbjct: 70 PFLTALK--YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 127
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ V++RDIK NL++D DG +KI DFGL + M T Y PE +L
Sbjct: 128 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPE-VLEDN 185
Query: 295 DYGVGVDLWSAGCILAELLAGK 316
DYG VD W G ++ E++ G+
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 106/201 (52%), Gaps = 11/201 (5%)
Query: 121 IDKI-GQGTYSNVYKAKDMLTGK---IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
IDK+ G G + V + L K VA+K ++ E + F+ E I+ + DHPN
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPN 107
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
+I+LEG+VT S + +V YME+ L + +FT Q+ + + SG+++ +
Sbjct: 108 IIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR--VVTLWYRPPELLLGA 293
G +HRD+ N+LI+ + V K++DFGL+ + + + T+R + + + PE +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAY 224
Query: 294 TDYGVGVDLWSAGCILAELLA 314
+ D+WS G +L E+++
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 106/201 (52%), Gaps = 11/201 (5%)
Query: 121 IDKI-GQGTYSNVYKAKDMLTGK---IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
IDK+ G G + V + L K VA+K ++ E + F+ E I+ + DHPN
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPN 107
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
+I+LEG+VT S + +V YME+ L + +FT Q+ + + SG+++ +
Sbjct: 108 IIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR--VVTLWYRPPELLLGA 293
G +HRD+ N+LI+ + V K++DFGL+ + + + T+R + + + PE +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAY 224
Query: 294 TDYGVGVDLWSAGCILAELLA 314
+ D+WS G +L E+++
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 106/201 (52%), Gaps = 11/201 (5%)
Query: 121 IDKI-GQGTYSNVYKAKDMLTGK---IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
IDK+ G G + V + L K VA+K ++ E + F+ E I+ + DHPN
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPN 107
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
+I+LEG+VT S + +V YME+ L + +FT Q+ + + SG+++ +
Sbjct: 108 IIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR--VVTLWYRPPELLLGA 293
G +HRD+ N+LI+ + V K++DFGL+ + + + T+R + + + PE +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAY 224
Query: 294 TDYGVGVDLWSAGCILAELLA 314
+ D+WS G +L E+++
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 106/201 (52%), Gaps = 11/201 (5%)
Query: 121 IDKI-GQGTYSNVYKAKDMLTGK---IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
IDK+ G G + V + L K VA+K ++ E + F+ E I+ + DHPN
Sbjct: 47 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPN 105
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
+I+LEG+VT S + +V YME+ L + +FT Q+ + + SG+++ +
Sbjct: 106 IIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 163
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR--VVTLWYRPPELLLGA 293
G +HRD+ N+LI+ + V K++DFGL+ + + + T+R + + + PE +
Sbjct: 164 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAY 222
Query: 294 TDYGVGVDLWSAGCILAELLA 314
+ D+WS G +L E+++
Sbjct: 223 RKFTSASDVWSYGIVLWEVMS 243
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 105/201 (52%), Gaps = 11/201 (5%)
Query: 121 IDKI-GQGTYSNVYKAKDMLTGK---IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
IDK+ G G + V + L K VA+K ++ E + F+ E I+ + DHPN
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPN 107
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
+I+LEG+VT S + +V YME+ L + +FT Q+ + + SG+++ +
Sbjct: 108 IIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR--VVTLWYRPPELLLGA 293
G +HRD+ N+LI+ + V K++DFGL + + + T+R + + + PE +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAY 224
Query: 294 TDYGVGVDLWSAGCILAELLA 314
+ D+WS G +L E+++
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS 245
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 23/218 (10%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH 174
A FE ++ +G GTY VYK + + TG++ A+K + E E +K +EI +L++ H
Sbjct: 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIK---QEINMLKKYSH 79
Query: 175 P-NVIKLEGLVTSR----MSCSLYLVFHYMEHDLAGLAASPEVKFT------EPQVKCYM 223
N+ G + M L+LV ME AG + + +K T E +
Sbjct: 80 HRNIATYYGAFIKKNPPGMDDQLWLV---MEFCGAG-SVTDLIKNTKGNTLKEEWIAYIC 135
Query: 224 HQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLW 283
++L GL H H + V+HRDIKG N+L+ ++ +K+ DFG+++ D T + T +
Sbjct: 136 REILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF-IGTPY 194
Query: 284 YRPPELLLGATD----YGVGVDLWSAGCILAELLAGKP 317
+ PE++ + Y DLWS G E+ G P
Sbjct: 195 WMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP 232
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 5/195 (2%)
Query: 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEP-ESVKFMAREILILRRLDHPNVIKL 180
D +G GT+ V + LTG VA+K + + + V + REI L+ HP++IKL
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 181 EGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLH 240
++++ ++V Y+ + E + + Q+LS +++CH + V+H
Sbjct: 77 YQVIST--PTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVH 134
Query: 241 RDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGV 300
RD+K N+L+D KIADFGL++ + + Y PE++ G G V
Sbjct: 135 RDLKPENVLLDAHMNAKIADFGLSNMMSDGEF--LRDSCGSPNYAAPEVISGRLYAGPEV 192
Query: 301 DLWSAGCILAELLAG 315
D+WS G IL LL G
Sbjct: 193 DIWSCGVILYALLCG 207
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 124 IGQ-GTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
IG+ G + VYKA++ T + A K + D E ++ EI IL DHPN++KL
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDYMVEIDILASCDHPNIVKL-- 72
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASP-----EVKFTEPQVKCYMHQLLSGLEHCHNNG 237
L +L+++ + AG A E TE Q++ Q L L + H+N
Sbjct: 73 LDAFYYENNLWILIEF----CAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 128
Query: 238 VLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATD-- 295
++HRD+K N+L DG +K+ADFG+++ S + T ++ PE+++ T
Sbjct: 129 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKD 188
Query: 296 --YGVGVDLWSAGCILAELLAGKP 317
Y D+WS G L E+ +P
Sbjct: 189 RPYDYKADVWSLGITLIEMAEIEP 212
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 107/217 (49%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D F++I +G G++ V K +G A+K + + ++ + ++ E IL+ ++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 122 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 179
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K + T Y PE++L +
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGATWTLCGTPEYLAPEIIL-SK 234
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 271
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE+I +G G++ V K TG A+K + + ++ + ++ E IL+ ++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F EP + Y Q++ E+ H
Sbjct: 94 PFLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 151
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 206
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 207 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 243
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 121/262 (46%), Gaps = 23/262 (8%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDN--LEPESVKFMAREILI 168
I + + FE +G+G++ V+ A+ T + A+K ++ D ++ + M + ++
Sbjct: 13 IKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 72
Query: 169 LRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLS 228
+HP + + T + +L+ V Y+ KF + Y +++
Sbjct: 73 SLAWEHPFLTHM--FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIIL 130
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLW----- 283
GL+ H+ G+++RD+K N+L+D DG +KIADFG+ K M T
Sbjct: 131 GLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMC-------KENMLGDAKTNEFCGTP 183
Query: 284 -YRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEY 342
Y PE+LLG Y VD WS G +L E+L G+ G+ E E H I +P
Sbjct: 184 DYIAPEILLGQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR--MDNPFYPR 240
Query: 343 W--KKSKLPNATLFKPREPYKR 362
W K++K LF REP KR
Sbjct: 241 WLEKEAKDLLVKLF-VREPEKR 261
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 125/293 (42%), Gaps = 44/293 (15%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE----SVKFMAREILILRR 171
D +E +++G G ++ V K + TGK A K ++ L S + + RE+ ILR
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 172 LDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ HPN+I L + ++ L L +L A E TE + ++ Q+L G+
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILEL-VSGGELFDFLAEKE-SLTEDEATQFLKQILDGVH 122
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGV----LKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ H+ + H D+K N+++ D V +K+ DFG+A HK + ++ P
Sbjct: 123 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA------HKIEAGNEFKNIFGTPE 176
Query: 288 ELLLGATDY---GVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344
+ +Y G+ D+WS G I LL+G G T+ E L I + EEY+
Sbjct: 177 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFS 236
Query: 345 KSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
+ E KDF I LL DP R+T +L
Sbjct: 237 NT------------------SELAKDF-------IRRLLVKDPKRRMTIAQSL 264
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 97/205 (47%), Gaps = 13/205 (6%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH 174
+D +E + IG G + +D ++VA+K + E+VK REI+ R L H
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVK---REIINHRSLRH 74
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++ + ++ + L +V Y +F+E + + + QL+SG+ + H
Sbjct: 75 PNIVRFKEVILT--PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAH 132
Query: 235 NNGVLHRDIKGSNLLIDDDGV--LKIADFGL--ASFFDPNHKHPMTSRVVTLWYRPPELL 290
V HRD+K N L+D LKIADFG AS H P S V T Y PE+L
Sbjct: 133 AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVL---HSQP-KSAVGTPAYIAPEVL 188
Query: 291 LGATDYGVGVDLWSAGCILAELLAG 315
L G D+WS G L +L G
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 128/304 (42%), Gaps = 48/304 (15%)
Query: 110 WIPRR---ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-RE 165
W+ R+ ++F + +G+G + V + TGK+ A KK+ ++ + MA E
Sbjct: 175 WLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNE 234
Query: 166 ILILRRLDHPNVIKLEGLVTSRMSCSLYLV--------FHYMEHDLAGLAASPEVKFTEP 217
IL +++ V+ L ++ + L L FH AG F E
Sbjct: 235 KQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG--------FPEA 286
Query: 218 QVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTS 277
+ Y ++ GLE H +++RD+K N+L+DD G ++I+D GLA +
Sbjct: 287 RAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKG 344
Query: 278 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGS 337
RV T+ Y PE++ Y D W+ GC+L E++AG+ R + + ++ +L
Sbjct: 345 RVGTVGYMAPEVVKNER-YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE 403
Query: 338 PSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
EEY ++ F P + L LL DPAERL
Sbjct: 404 VPEEYSER-------------------------FSPQARSLCSQLLCKDPAERLGCRGGS 438
Query: 398 NSEV 401
EV
Sbjct: 439 AREV 442
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 128/304 (42%), Gaps = 48/304 (15%)
Query: 110 WIPRR---ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-RE 165
W+ R+ ++F + +G+G + V + TGK+ A KK+ ++ + MA E
Sbjct: 175 WLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNE 234
Query: 166 ILILRRLDHPNVIKLEGLVTSRMSCSLYLV--------FHYMEHDLAGLAASPEVKFTEP 217
IL +++ V+ L ++ + L L FH AG F E
Sbjct: 235 KQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG--------FPEA 286
Query: 218 QVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTS 277
+ Y ++ GLE H +++RD+K N+L+DD G ++I+D GLA +
Sbjct: 287 RAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKG 344
Query: 278 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGS 337
RV T+ Y PE++ Y D W+ GC+L E++AG+ R + + ++ +L
Sbjct: 345 RVGTVGYMAPEVVKNER-YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE 403
Query: 338 PSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
EEY ++ F P + L LL DPAERL
Sbjct: 404 VPEEYSER-------------------------FSPQARSLCSQLLCKDPAERLGCRGGS 438
Query: 398 NSEV 401
EV
Sbjct: 439 AREV 442
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 121/256 (47%), Gaps = 27/256 (10%)
Query: 99 LTAVC--------GEALNGW-IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV 149
LT VC G A + W IPR + E K+GQG + V+ T + VA+K +
Sbjct: 160 LTTVCPTSKPQTQGLAKDAWEIPRESLRLEV--KLGQGCFGEVWMGTWNGTTR-VAIKTL 216
Query: 150 RFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD--LAGLA 207
+ + PE+ +E ++++L H +++L +V+ +Y+V YM L L
Sbjct: 217 KPGTMSPEA---FLQEAQVMKKLRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLK 270
Query: 208 ASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF 267
PQ+ Q+ SG+ + +HRD++ +N+L+ ++ V K+ADFGLA
Sbjct: 271 GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 330
Query: 268 DPN-HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG---R 322
+ N + ++ W P L G + + D+WS G +L EL G+ PG R
Sbjct: 331 EDNEYTARQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNR 388
Query: 323 TEVEQLHKIYKLCGSP 338
++Q+ + Y++ P
Sbjct: 389 EVLDQVERGYRMPCPP 404
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 121/256 (47%), Gaps = 27/256 (10%)
Query: 99 LTAVC--------GEALNGW-IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV 149
LT VC G A + W IPR + E K+GQG + V+ T + VA+K +
Sbjct: 160 LTTVCPTSKPQTQGLAKDAWEIPRESLRLEV--KLGQGCFGEVWMGTWNGTTR-VAIKTL 216
Query: 150 RFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD--LAGLA 207
+ + PE+ +E ++++L H +++L +V+ +Y+V YM L L
Sbjct: 217 KPGTMSPEA---FLQEAQVMKKLRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLK 270
Query: 208 ASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF 267
PQ+ Q+ SG+ + +HRD++ +N+L+ ++ V K+ADFGLA
Sbjct: 271 GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 330
Query: 268 DPN-HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG---R 322
+ N + ++ W P L G + + D+WS G +L EL G+ PG R
Sbjct: 331 EDNEYTARQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNR 388
Query: 323 TEVEQLHKIYKLCGSP 338
++Q+ + Y++ P
Sbjct: 389 EVLDQVERGYRMPCPP 404
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 107/217 (49%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D F++I +G G++ V K +G A+K + + ++ + ++ E IL+ ++
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 88 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 145
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID+ G +++ DFG A K T Y PE++L +
Sbjct: 146 SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 200
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 201 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 237
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 8/203 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D F++I +G G++ V K +G A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLAGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKP 317
Y VD W+ G ++ E+ AG P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 120/252 (47%), Gaps = 27/252 (10%)
Query: 99 LTAVC--------GEALNGW-IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV 149
LT VC G A + W IPR + E K+GQG + V+ T + VA+K +
Sbjct: 243 LTTVCPTSKPQTQGLAKDAWEIPRESLRLEV--KLGQGCFGEVWMGTWNGTTR-VAIKTL 299
Query: 150 RFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD--LAGLA 207
+ + PE+ +E ++++L H +++L +V+ +Y+V YM L L
Sbjct: 300 KPGTMSPEA---FLQEAQVMKKLRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLK 353
Query: 208 ASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF 267
PQ+ Q+ SG+ + +HRD++ +N+L+ ++ V K+ADFGLA
Sbjct: 354 GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 413
Query: 268 DPN-HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG---R 322
+ N + ++ W P L G + + D+WS G +L EL G+ PG R
Sbjct: 414 EDNEYTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNR 471
Query: 323 TEVEQLHKIYKL 334
++Q+ + Y++
Sbjct: 472 EVLDQVERGYRM 483
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH 174
+D +E + IG G + +D + ++VA+K + +VK REI+ R L H
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVK---REIINHRSLRH 74
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++ + ++ + L +V Y +F+E + + + QL+SG+ +CH
Sbjct: 75 PNIVRFKEVILT--PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 235 NNGVLHRDIKGSNLLIDDDGV--LKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
V HRD+K N L+D LKI DFG + H P S V T Y PE+LL
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK-SSVLHSQP-KSTVGTPAYIAPEVLLK 190
Query: 293 ATDYGVGVDLWSAGCILAELLAG 315
G D+WS G L +L G
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 106/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D F++I +G G++ V K +G A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 25/204 (12%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALK---KVRFDNLEPESVKFMAREILILRRL-DHPNVIK 179
IG+G + VY + TGK+ A+K K R + E++ R +L L D P ++
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 255
Query: 180 LEGLVTS--RMSCSLYLV------FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ + ++S L L+ +H +H + F+E ++ Y +++ GLE
Sbjct: 256 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV----------FSEADMRFYAAEIILGLE 305
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLL 291
H HN V++RD+K +N+L+D+ G ++I+D GLA F H + V T Y PE+L
Sbjct: 306 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTHGYMAPEVLQ 362
Query: 292 GATDYGVGVDLWSAGCILAELLAG 315
Y D +S GC+L +LL G
Sbjct: 363 KGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 25/204 (12%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALK---KVRFDNLEPESVKFMAREILILRRL-DHPNVIK 179
IG+G + VY + TGK+ A+K K R + E++ R +L L D P ++
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 180 LEGLVTS--RMSCSLYLV------FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ + ++S L L+ +H +H + F+E ++ Y +++ GLE
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV----------FSEADMRFYAAEIILGLE 306
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLL 291
H HN V++RD+K +N+L+D+ G ++I+D GLA F H + V T Y PE+L
Sbjct: 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTHGYMAPEVLQ 363
Query: 292 GATDYGVGVDLWSAGCILAELLAG 315
Y D +S GC+L +LL G
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 25/204 (12%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALK---KVRFDNLEPESVKFMAREILILRRL-DHPNVIK 179
IG+G + VY + TGK+ A+K K R + E++ R +L L D P ++
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 180 LEGLVTS--RMSCSLYLV------FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ + ++S L L+ +H +H + F+E ++ Y +++ GLE
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV----------FSEADMRFYAAEIILGLE 306
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLL 291
H HN V++RD+K +N+L+D+ G ++I+D GLA F H + V T Y PE+L
Sbjct: 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTHGYMAPEVLQ 363
Query: 292 GATDYGVGVDLWSAGCILAELLAG 315
Y D +S GC+L +LL G
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 8/203 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D F++I +G G++ V K +G A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLXGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKP 317
Y VD W+ G ++ E+ AG P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 106/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D F++I +G G++ V K +G A+K + + ++ + ++ E IL+ ++
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 102 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 214
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 106/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D F++I +G G++ V K +G A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 25/204 (12%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALK---KVRFDNLEPESVKFMAREILILRRL-DHPNVIK 179
IG+G + VY + TGK+ A+K K R + E++ R +L L D P ++
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 180 LEGLVTS--RMSCSLYLV------FHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ + ++S L L+ +H +H + F+E ++ Y +++ GLE
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV----------FSEADMRFYAAEIILGLE 306
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLL 291
H HN V++RD+K +N+L+D+ G ++I+D GLA F H + V T Y PE+L
Sbjct: 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTHGYMAPEVLQ 363
Query: 292 GATDYGVGVDLWSAGCILAELLAG 315
Y D +S GC+L +LL G
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 134/285 (47%), Gaps = 39/285 (13%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
KIG+G+ V A++ +G+ VA+K + D + + + + E++I+R H NV+++
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMM--DLRKQQRRELLFNEVVIMRDYQHFNVVEMYK 109
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
+ + L+++ +++ S +V+ E Q+ +L L + H GV+HRD
Sbjct: 110 --SYLVGEELWVLMEFLQGGALTDIVS-QVRLNEEQIATVCEAVLQALAYLHAQGVIHRD 166
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFD---PNHKHPMTSRVVTLWYRPPELLLGATDYGVG 299
IK ++L+ DG +K++DFG + P K V T ++ PE ++ + Y
Sbjct: 167 IKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK----XLVGTPYWMAPE-VISRSLYATE 221
Query: 300 VDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREP 359
VD+WS G ++ E++ G+P + V+ + +L SP KL N+ P
Sbjct: 222 VDIWSLGIMVIEMVDGEPPYFSDSPVQAMK---RLRDSPP------PKLKNSHKVSP--- 269
Query: 360 YKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIFQ 404
+DF +E +L DP ER TA L+ + Q
Sbjct: 270 -------VLRDF-------LERMLVRDPQERATAQELLDHPFLLQ 300
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 120/252 (47%), Gaps = 27/252 (10%)
Query: 99 LTAVC--------GEALNGW-IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV 149
LT VC G A + W IPR + E K+GQG + V+ T + VA+K +
Sbjct: 160 LTTVCPTSKPQTQGLAKDAWEIPRESLRLEV--KLGQGCFGEVWMGTWNGTTR-VAIKTL 216
Query: 150 RFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD--LAGLA 207
+ + PE+ +E ++++L H +++L +V+ +Y+V YM L L
Sbjct: 217 KPGTMSPEA---FLQEAQVMKKLRHEKLVQLYAVVSEE---PIYIVGEYMSKGSLLDFLK 270
Query: 208 ASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF 267
PQ+ Q+ SG+ + +HRD++ +N+L+ ++ V K+ADFGLA
Sbjct: 271 GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 330
Query: 268 DPN-HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG---R 322
+ N + ++ W P L G + + D+WS G +L EL G+ PG R
Sbjct: 331 EDNEYTARQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNR 388
Query: 323 TEVEQLHKIYKL 334
++Q+ + Y++
Sbjct: 389 EVLDQVERGYRM 400
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 107/208 (51%), Gaps = 15/208 (7%)
Query: 117 SFEKIDK-IGQGTYSNVYKAKDMLTGK---IVALKKVRFDNLEPESVKFMAREILILRRL 172
S+ KI++ IG G + V + + GK VA+K ++ E + +F++ E I+ +
Sbjct: 14 SYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLS-EASIMGQF 72
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+HPN+I+LEG+VT+ M + ++ +ME+ L + +FT Q+ + + SG+
Sbjct: 73 EHPNIIRLEGVVTNSMP--VMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMR 130
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF-----DPNHKHPMTSRVVTLWYRP 286
+ +HRD+ N+L++ + V K++DFGL+ F DP + + ++ W P
Sbjct: 131 YLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAP 190
Query: 287 PELLLGATDYGVGVDLWSAGCILAELLA 314
+ + D WS G ++ E+++
Sbjct: 191 EAIAF--RKFTSASDAWSYGIVMWEVMS 216
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 118/228 (51%), Gaps = 18/228 (7%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKI---VALKKVRFDNLEPESVKFMAREILILRRLDH 174
EKI IG G V + + G+ VA+K ++ E + F++ E I+ + DH
Sbjct: 53 IEKI--IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLS-EASIMGQFDH 109
Query: 175 PNVIKLEGLVT-SRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
PN+I+LEG+VT R++ +V YME+ L + + +FT Q+ + + +G+ +
Sbjct: 110 PNIIRLEGVVTRGRLAM---IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRY 166
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF--DPNHKHPMTSRVVTLWYRPPELL 290
+ G +HRD+ N+L+D + V K++DFGL+ DP+ + T + + + PE +
Sbjct: 167 LSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAI 226
Query: 291 LGATDYGVGVDLWSAGCILAELLA--GKPI--MPGRTEVEQLHKIYKL 334
T + D+WS G ++ E+LA +P M R + + + Y+L
Sbjct: 227 AFRT-FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRL 273
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 24/219 (10%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDN-LEPESVKFMAREILILRRLDHPNVIKLEG 182
+G+G++ V A T ++ A+K ++ D ++ + V+ E +L LD P
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPP------ 80
Query: 183 LVTSRMSC-----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNG 237
+T SC LY V Y+ KF EPQ Y ++ GL H G
Sbjct: 81 FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRG 140
Query: 238 VLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPM---TSRVV--TLWYRPPELLLG 292
+++RD+K N+++D +G +KIADFG+ +H M T+R T Y PE ++
Sbjct: 141 IIYRDLKLDNVMLDSEGHIKIADFGMCK------EHMMDGVTTREFCGTPDYIAPE-IIA 193
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
YG VD W+ G +L E+LAG+P G E E I
Sbjct: 194 YQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSI 232
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 106/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D F++I +G G++ V K +G A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 8/203 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D F++I +G G++ V K +G A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKP 317
Y VD W+ G ++ E+ AG P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 106/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D F++I +G G++ V K +G A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 120/252 (47%), Gaps = 27/252 (10%)
Query: 99 LTAVC--------GEALNGW-IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV 149
LT VC G A + W IPR + E K+GQG + V+ T + VA+K +
Sbjct: 161 LTNVCPTSKPQTQGLAKDAWEIPRESLRLEV--KLGQGCFGEVWMGTWNGTTR-VAIKTL 217
Query: 150 RFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD--LAGLA 207
+ N+ PE+ +E ++++L H +++L +V+ +Y+V YM L L
Sbjct: 218 KPGNMSPEA---FLQEAQVMKKLRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLK 271
Query: 208 ASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF 267
PQ+ Q+ SG+ + +HRD++ +N+L+ ++ V K+ADFGL
Sbjct: 272 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLI 331
Query: 268 DPN-HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG---R 322
+ N + ++ W P L G + + D+WS G +L EL G+ PG R
Sbjct: 332 EDNEYTARQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNR 389
Query: 323 TEVEQLHKIYKL 334
++Q+ + Y++
Sbjct: 390 EVLDQVERGYRM 401
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 121 IDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+ ++G+G + +V Y TG++VA+KK++ E ++ REI IL+ L H N
Sbjct: 22 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 79
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
++K +G+ S +L L+ Y+ + L + + ++ Y Q+ G+E+
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 139
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH-----KHPMTSRVVTLWYRPPELL 290
+HRD+ N+L++++ +KI DFGL + K P S + WY P L
Sbjct: 140 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWYAPESLT 197
Query: 291 LGATDYGVGVDLWSAGCILAELLA 314
+ + V D+WS G +L EL
Sbjct: 198 --ESKFSVASDVWSFGVVLYELFT 219
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 121 IDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+ ++G+G + +V Y TG++VA+KK++ E ++ REI IL+ L H N
Sbjct: 20 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 77
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
++K +G+ S +L L+ Y+ + L + + ++ Y Q+ G+E+
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 137
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH-----KHPMTSRVVTLWYRPPELL 290
+HRD+ N+L++++ +KI DFGL + K P S + WY P L
Sbjct: 138 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWYAPESLT 195
Query: 291 LGATDYGVGVDLWSAGCILAELLA 314
+ + V D+WS G +L EL
Sbjct: 196 --ESKFSVASDVWSFGVVLYELFT 217
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 121 IDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+ ++G+G + +V Y TG++VA+KK++ E ++ REI IL+ L H N
Sbjct: 13 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 70
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
++K +G+ S +L L+ Y+ + L + + ++ Y Q+ G+E+
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 130
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH-----KHPMTSRVVTLWYRPPELL 290
+HRD+ N+L++++ +KI DFGL + K P S + WY P L
Sbjct: 131 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWYAPESLT 188
Query: 291 LGATDYGVGVDLWSAGCILAELLA 314
+ + V D+WS G +L EL
Sbjct: 189 --ESKFSVASDVWSFGVVLYELFT 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 121 IDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+ ++G+G + +V Y TG++VA+KK++ E ++ REI IL+ L H N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 72
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
++K +G+ S +L L+ Y+ + L + + ++ Y Q+ G+E+
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH-----KHPMTSRVVTLWYRPPELL 290
+HRD+ N+L++++ +KI DFGL + K P S + WY P L
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWYAPESLT 190
Query: 291 LGATDYGVGVDLWSAGCILAELLA 314
+ + V D+WS G +L EL
Sbjct: 191 --ESKFSVASDVWSFGVVLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 121 IDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+ ++G+G + +V Y TG++VA+KK++ E ++ REI IL+ L H N
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 75
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
++K +G+ S +L L+ Y+ + L + + ++ Y Q+ G+E+
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH-----KHPMTSRVVTLWYRPPELL 290
+HRD+ N+L++++ +KI DFGL + K P S + WY P L
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWYAPESLT 193
Query: 291 LGATDYGVGVDLWSAGCILAELLA 314
+ + V D+WS G +L EL
Sbjct: 194 --ESKFSVASDVWSFGVVLYELFT 215
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 100/200 (50%), Gaps = 14/200 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGK---IVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
IG G + V L GK VA+K ++ E + F++ E I+ + DHPNVI L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLS-EASIMGQFDHPNVIHL 99
Query: 181 EGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
EG+VT S + ++ +ME+ L + +FT Q+ + + +G+++ + +
Sbjct: 100 EGVVTK--STPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYV 157
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLASFF-----DPNHKHPMTSRVVTLWYRPPELLLGAT 294
HRD+ N+L++ + V K++DFGL+ F DP + + ++ W P +
Sbjct: 158 HRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY--R 215
Query: 295 DYGVGVDLWSAGCILAELLA 314
+ D+WS G ++ E+++
Sbjct: 216 KFTSASDVWSYGIVMWEVMS 235
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 121 IDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+ ++G+G + +V Y TG++VA+KK++ E ++ REI IL+ L H N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 72
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
++K +G+ S +L L+ Y+ + L + + ++ Y Q+ G+E+
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH-----KHPMTSRVVTLWYRPPELL 290
+HRD+ N+L++++ +KI DFGL + K P S + WY P L
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWYAPESLT 190
Query: 291 LGATDYGVGVDLWSAGCILAELLA 314
+ + V D+WS G +L EL
Sbjct: 191 --ESKFSVASDVWSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 24/224 (10%)
Query: 109 GWIPRRADS---FEK-----IDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEP 156
G +PR + + FE+ + ++G+G + +V Y TG++VA+KK++
Sbjct: 13 GLVPRGSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--E 70
Query: 157 ESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFT 215
E ++ REI IL+ L H N++K +G+ S +L L+ Y+ + L + +
Sbjct: 71 EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 130
Query: 216 EPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH---- 271
++ Y Q+ G+E+ +HRD+ N+L++++ +KI DFGL +
Sbjct: 131 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 190
Query: 272 -KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
K P S + WY P L + + V D+WS G +L EL
Sbjct: 191 VKEPGESPI--FWYAPESLT--ESKFSVASDVWSFGVVLYELFT 230
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 121 IDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+ ++G+G + +V Y TG++VA+KK++ E ++ REI IL+ L H N
Sbjct: 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 103
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
++K +G+ S +L L+ Y+ + L + + ++ Y Q+ G+E+
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 163
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH-----KHPMTSRVVTLWYRPPELL 290
+HRD+ N+L++++ +KI DFGL + K P S + WY P L
Sbjct: 164 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWYAPESLT 221
Query: 291 LGATDYGVGVDLWSAGCILAELLA 314
+ + V D+WS G +L EL
Sbjct: 222 --ESKFSVASDVWSFGVVLYELFT 243
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 121 IDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+ ++G+G + +V Y TG++VA+KK++ E ++ REI IL+ L H N
Sbjct: 14 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 71
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
++K +G+ S +L L+ Y+ + L + + ++ Y Q+ G+E+
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 131
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH-----KHPMTSRVVTLWYRPPELL 290
+HRD+ N+L++++ +KI DFGL + K P S + WY P L
Sbjct: 132 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWYAPESLT 189
Query: 291 LGATDYGVGVDLWSAGCILAELLA 314
+ + V D+WS G +L EL
Sbjct: 190 --ESKFSVASDVWSFGVVLYELFT 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 121 IDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+ ++G+G + +V Y TG++VA+KK++ E ++ REI IL+ L H N
Sbjct: 19 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 76
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
++K +G+ S +L L+ Y+ + L + + ++ Y Q+ G+E+
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 136
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH-----KHPMTSRVVTLWYRPPELL 290
+HRD+ N+L++++ +KI DFGL + K P S + WY P L
Sbjct: 137 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWYAPESLT 194
Query: 291 LGATDYGVGVDLWSAGCILAELLA 314
+ + V D+WS G +L EL
Sbjct: 195 --ESKFSVASDVWSFGVVLYELFT 216
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 24/224 (10%)
Query: 109 GWIPRRADS---FEK-----IDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEP 156
G +PR + + FE+ + ++G+G + +V Y TG++VA+KK++
Sbjct: 13 GLVPRGSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--E 70
Query: 157 ESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFT 215
E ++ REI IL+ L H N++K +G+ S +L L+ Y+ + L + +
Sbjct: 71 EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 130
Query: 216 EPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH---- 271
++ Y Q+ G+E+ +HRD+ N+L++++ +KI DFGL +
Sbjct: 131 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 190
Query: 272 -KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
K P S + WY P L + + V D+WS G +L EL
Sbjct: 191 VKEPGESPI--FWYAPESLT--ESKFSVASDVWSFGVVLYELFT 230
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 121 IDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+ ++G+G + +V Y TG++VA+KK++ E ++ REI IL+ L H N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 72
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
++K +G+ S +L L+ Y+ + L + + ++ Y Q+ G+E+
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH-----KHPMTSRVVTLWYRPPELL 290
+HRD+ N+L++++ +KI DFGL + K P S + WY P L
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI--FWYAPESLT 190
Query: 291 LGATDYGVGVDLWSAGCILAELLA 314
+ + V D+WS G +L EL
Sbjct: 191 --ESKFSVASDVWSFGVVLYELFT 212
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 14/207 (6%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
+E + ++G G + VYKAK+ TG + A K + + E ++ EI IL DHP +
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVI--ETKSEEELEDYIVEIEILATCDHPYI 78
Query: 178 IKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
+KL G L+++ + + + + TEPQ++ Q+L L H+
Sbjct: 79 VKLLG--AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 237 GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HPMTSRVVTLWYRPPELL---- 290
++HRD+K N+L+ +G +++ADFG+++ N K S + T ++ PE++
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSA---KNLKTLQKRDSFIGTPYWMAPEVVMCET 193
Query: 291 LGATDYGVGVDLWSAGCILAELLAGKP 317
+ T Y D+WS G L E+ +P
Sbjct: 194 MKDTPYDYKADIWSLGITLIEMAQIEP 220
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 121 IDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+ ++G+G + +V Y TG++VA+KK++ E ++ REI IL+ L H N
Sbjct: 21 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 78
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
++K +G+ S +L L+ Y+ + L + + ++ Y Q+ G+E+
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 138
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH-----KHPMTSRVVTLWYRPPELL 290
+HRD+ N+L++++ +KI DFGL + K P S + WY P L
Sbjct: 139 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWYAPESLT 196
Query: 291 LGATDYGVGVDLWSAGCILAELLA 314
+ + V D+WS G +L EL
Sbjct: 197 --ESKFSVASDVWSFGVVLYELFT 218
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D F++I +G G++ V K +G A+K + + ++ + ++ E IL+ ++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F EP + Y Q++ E+ H
Sbjct: 122 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 179
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 234
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 271
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
KIG+G+ V A +GK+VA+KK+ D + + + + E++I+R H NV+++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYN 215
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
+ + L++V ++E A + E Q+ +L L H GV+HRD
Sbjct: 216 --SYLVGDELWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 272
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGATDYGVGVD 301
IK ++L+ DG +K++DFG + + + P +V T ++ PE L+ YG VD
Sbjct: 273 IKSDSILLTHDGRVKLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVD 329
Query: 302 LWSAGCILAELLAGKP 317
+WS G ++ E++ G+P
Sbjct: 330 IWSLGIMVIEMVDGEP 345
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 121 IDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+ ++G+G + +V Y TG++VA+KK++ E ++ REI IL+ L H N
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 75
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
++K +G+ S +L L+ Y+ + L + + ++ Y Q+ G+E+
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGT 135
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH-----KHPMTSRVVTLWYRPPELL 290
+HRD+ N+L++++ +KI DFGL + K P S + WY P L
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWYAPESLT 193
Query: 291 LGATDYGVGVDLWSAGCILAELLA 314
+ + V D+WS G +L EL
Sbjct: 194 --ESKFSVASDVWSFGVVLYELFT 215
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D F++I +G G++ V K +G A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH 174
+D +E + IG G + +D + ++VA+K + E+VK REI+ R L H
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK---REIINHRSLRH 74
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++ + ++ + L +V Y +F+E + + + QL+SG+ +CH
Sbjct: 75 PNIVRFKEVILT--PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 235 NNGVLHRDIKGSNLLIDDDGV--LKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
V HRD+K N L+D LKI FG + H P S V T Y PE+LL
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK-SSVLHSQP-KSTVGTPAYIAPEVLLK 190
Query: 293 ATDYGVGVDLWSAGCILAELLAG 315
G D+WS G L +L G
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 105/201 (52%), Gaps = 11/201 (5%)
Query: 121 IDKI-GQGTYSNVYKAKDMLTGK---IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
IDK+ G G + V + L K VA+K ++ E + F+ E I+ + DHPN
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPN 78
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
+I+LEG+VT S + +V ME+ L + +FT Q+ + + SG+++ +
Sbjct: 79 IIRLEGVVTK--SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 136
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR--VVTLWYRPPELLLGA 293
G +HRD+ N+LI+ + V K++DFGL+ + + + T+R + + + PE +
Sbjct: 137 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAY 195
Query: 294 TDYGVGVDLWSAGCILAELLA 314
+ D+WS G +L E+++
Sbjct: 196 RKFTSASDVWSYGIVLWEVMS 216
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 35/273 (12%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
KIG+G+ V A +GK+VA+KK+ D + + + + E++I+R H NV+++
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYN 95
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
+ + L++V ++E A + E Q+ +L L H GV+HRD
Sbjct: 96 --SYLVGDELWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 152
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGATDYGVGVD 301
IK ++L+ DG +K++DFG + + + P +V T ++ PE L+ YG VD
Sbjct: 153 IKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVD 209
Query: 302 LWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYK 361
+WS G ++ E++ G+P Y+ + L + + P +
Sbjct: 210 IWSLGIMVIEMVDGEP-----------------------PYFNEPPLKAMKMIRDNLPPR 246
Query: 362 RCIQETFKDFPPSSLPLIETLLAIDPAERLTAT 394
+ PS ++ LL DPA+R TA
Sbjct: 247 ---LKNLHKVSPSLKGFLDRLLVRDPAQRATAA 276
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 14/207 (6%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
+E + ++G G + VYKAK+ TG + A K + + E ++ EI IL DHP +
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVI--ETKSEEELEDYIVEIEILATCDHPYI 70
Query: 178 IKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
+KL G L+++ + + + + TEPQ++ Q+L L H+
Sbjct: 71 VKLLG--AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 237 GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HPMTSRVVTLWYRPPELL---- 290
++HRD+K N+L+ +G +++ADFG+++ N K S + T ++ PE++
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSA---KNLKTLQKRDSFIGTPYWMAPEVVMCET 185
Query: 291 LGATDYGVGVDLWSAGCILAELLAGKP 317
+ T Y D+WS G L E+ +P
Sbjct: 186 MKDTPYDYKADIWSLGITLIEMAQIEP 212
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D F++I +G G++ V K +G A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D F++I +G G++ V K +G A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 107/208 (51%), Gaps = 15/208 (7%)
Query: 117 SFEKIDK-IGQGTYSNVYKAKDMLTGK---IVALKKVRFDNLEPESVKFMAREILILRRL 172
S+ KI++ IG G + V + + GK VA+K ++ E + +F++ E I+ +
Sbjct: 16 SYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLS-EASIMGQF 74
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+HPN+I+LEG+VT+ M + ++ +ME+ L + +FT Q+ + + SG+
Sbjct: 75 EHPNIIRLEGVVTNSMP--VMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMR 132
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP-----MTSRVVTLWYRP 286
+ +HRD+ N+L++ + V K++DFGL+ F + N P + ++ W P
Sbjct: 133 YLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAP 192
Query: 287 PELLLGATDYGVGVDLWSAGCILAELLA 314
+ + D WS G ++ E+++
Sbjct: 193 EAIAF--RKFTSASDAWSYGIVMWEVMS 218
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 105/201 (52%), Gaps = 11/201 (5%)
Query: 121 IDKI-GQGTYSNVYKAKDMLTGK---IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
IDK+ G G + V + L K VA+K ++ E + F+ E I+ + DHPN
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPN 107
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
+I+LEG+VT S + +V ME+ L + +FT Q+ + + SG+++ +
Sbjct: 108 IIRLEGVVTK--SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR--VVTLWYRPPELLLGA 293
G +HRD+ N+LI+ + V K++DFGL+ + + + T+R + + + PE +
Sbjct: 166 MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAY 224
Query: 294 TDYGVGVDLWSAGCILAELLA 314
+ D+WS G +L E+++
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS 245
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 8/203 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D F++I +G G++ V K +G A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKP 317
Y VD W+ G ++ E+ AG P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 35/273 (12%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
KIG+G+ V A +GK+VA+KK+ D + + + + E++I+R H NV+++
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYN 84
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
+ + L++V ++E A + E Q+ +L L H GV+HRD
Sbjct: 85 --SYLVGDELWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 141
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGATDYGVGVD 301
IK ++L+ DG +K++DFG + + + P +V T ++ PE L+ YG VD
Sbjct: 142 IKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVD 198
Query: 302 LWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYK 361
+WS G ++ E++ G+P Y+ + L + + P +
Sbjct: 199 IWSLGIMVIEMVDGEP-----------------------PYFNEPPLKAMKMIRDNLPPR 235
Query: 362 RCIQETFKDFPPSSLPLIETLLAIDPAERLTAT 394
+ PS ++ LL DPA+R TA
Sbjct: 236 ---LKNLHKVSPSLKGFLDRLLVRDPAQRATAA 265
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 35/273 (12%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
KIG+G+ V A +GK+VA+KK+ D + + + + E++I+R H NV+++
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYN 88
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
+ + L++V ++E A + E Q+ +L L H GV+HRD
Sbjct: 89 --SYLVGDELWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 145
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGATDYGVGVD 301
IK ++L+ DG +K++DFG + + + P +V T ++ PE L+ YG VD
Sbjct: 146 IKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVD 202
Query: 302 LWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYK 361
+WS G ++ E++ G+P Y+ + L + + P +
Sbjct: 203 IWSLGIMVIEMVDGEP-----------------------PYFNEPPLKAMKMIRDNLPPR 239
Query: 362 RCIQETFKDFPPSSLPLIETLLAIDPAERLTAT 394
+ PS ++ LL DPA+R TA
Sbjct: 240 ---LKNLHKVSPSLKGFLDRLLVRDPAQRATAA 269
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 113/254 (44%), Gaps = 13/254 (5%)
Query: 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRL 172
+A+ ++ + IG+G + V + + K+ A+K + +F+ ++ F E I+
Sbjct: 73 KAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 132
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ P V++L + LY+V YM DL L ++ +V E K Y +++ L+
Sbjct: 133 NSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDV--PEKWAKFYTAEVVLALD 188
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLL 291
H+ G++HRD+K N+L+D G LK+ADFG D + V T Y PE+L
Sbjct: 189 AIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLK 248
Query: 292 ---GATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIY----KLCGSPSEEYWK 344
G YG D WS G L E+L G + V KI LC E K
Sbjct: 249 SQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISK 308
Query: 345 KSKLPNATLFKPRE 358
+K RE
Sbjct: 309 HAKNLICAFLTDRE 322
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 116/249 (46%), Gaps = 23/249 (9%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDN-LEPESVKFMAREILILR-RLDHPNVIKLE 181
+G+G++ V+ A+ T + A+K ++ D L + V+ E +L +HP + +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM- 83
Query: 182 GLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHR 241
T + +L+ V Y+ KF + Y +++ GL+ H+ G+++R
Sbjct: 84 -FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYR 142
Query: 242 DIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLW------YRPPELLLGATD 295
D+K N+L+D DG +KIADFG+ K M T Y PE+LLG
Sbjct: 143 DLKLDNILLDKDGHIKIADFGMC-------KENMLGDAKTNXFCGTPDYIAPEILLGQK- 194
Query: 296 YGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYW--KKSKLPNATL 353
Y VD WS G +L E+L G+ G+ E E H I +P W K++K L
Sbjct: 195 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR--MDNPFYPRWLEKEAKDLLVKL 252
Query: 354 FKPREPYKR 362
F REP KR
Sbjct: 253 F-VREPEKR 260
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 35/273 (12%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
KIG+G+ V A +GK+VA+KK+ D + + + + E++I+R H NV+++
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYN 93
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
+ + L++V ++E A + E Q+ +L L H GV+HRD
Sbjct: 94 --SYLVGDELWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 150
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGATDYGVGVD 301
IK ++L+ DG +K++DFG + + + P +V T ++ PE L+ YG VD
Sbjct: 151 IKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVD 207
Query: 302 LWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYK 361
+WS G ++ E++ G+P Y+ + L + + P +
Sbjct: 208 IWSLGIMVIEMVDGEP-----------------------PYFNEPPLKAMKMIRDNLPPR 244
Query: 362 RCIQETFKDFPPSSLPLIETLLAIDPAERLTAT 394
+ PS ++ LL DPA+R TA
Sbjct: 245 ---LKNLHKVSPSLKGFLDRLLVRDPAQRATAA 274
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 12/198 (6%)
Query: 124 IGQGTYSNVYKAKDMLTGKI---VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
IG G + V + L GK VA+K ++ E + F+ E I+ + DHPN+I L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPNIIHL 88
Query: 181 EGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
EG+VT S + +V YME+ L + +FT Q+ + + +G+++ + G +
Sbjct: 89 EGVVTK--SKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYV 146
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR---VVTLWYRPPELLLGATDY 296
HRD+ N+LI+ + V K++DFGL+ + + + T+R + W P + +
Sbjct: 147 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAF--RKF 204
Query: 297 GVGVDLWSAGCILAELLA 314
D+WS G ++ E+++
Sbjct: 205 TSASDVWSYGIVMWEVVS 222
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D F++I +G G++ V K +G A+K + + ++ + ++ E IL+ ++
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F EP + Y Q++ E+ H
Sbjct: 96 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 153
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 154 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 208
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 209 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 245
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 117/243 (48%), Gaps = 19/243 (7%)
Query: 104 GEALNGW-IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFM 162
G A + W IPR + E K+GQG + V+ T + VA+K ++ + PE+
Sbjct: 4 GLAKDAWEIPRESLRLEV--KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---F 57
Query: 163 AREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD--LAGLAASPEVKFTEPQVK 220
+E ++++L H +++L +V+ +Y+V YM L L PQ+
Sbjct: 58 LQEAQVMKKLRHEKLVQLYAVVSEE---PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLV 114
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN-HKHPMTSRV 279
Q+ SG+ + +HRD++ +N+L+ ++ V K+ADFGLA + N + ++
Sbjct: 115 DMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 174
Query: 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG---RTEVEQLHKIYKLC 335
W P L G + + D+WS G +L EL G+ PG R ++Q+ + Y++
Sbjct: 175 PIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 232
Query: 336 GSP 338
P
Sbjct: 233 CPP 235
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 107/221 (48%), Gaps = 16/221 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D F++I +G G++ V K +G A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRP----PELL 290
+ +++RD+K NLLID G +++ DFG A + R L P PE++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEALAPEII 210
Query: 291 LGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
L + Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 211 L-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 117/228 (51%), Gaps = 18/228 (7%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKI---VALKKVRFDNLEPESVKFMAREILILRRLDH 174
EKI IG G V + + G+ VA+K ++ E + F++ E I+ + DH
Sbjct: 53 IEKI--IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLS-EASIMGQFDH 109
Query: 175 PNVIKLEGLVT-SRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
PN+I+LEG+VT R++ +V YME+ L + + +FT Q+ + + +G+ +
Sbjct: 110 PNIIRLEGVVTRGRLAM---IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRY 166
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF--DPNHKHPMTSRVVTLWYRPPELL 290
+ G +HRD+ N+L+D + V K++DFGL+ DP+ T + + + PE +
Sbjct: 167 LSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAI 226
Query: 291 LGATDYGVGVDLWSAGCILAELLA--GKPI--MPGRTEVEQLHKIYKL 334
T + D+WS G ++ E+LA +P M R + + + Y+L
Sbjct: 227 AFRT-FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRL 273
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 35/273 (12%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
KIG+G+ V A +GK+VA+KK+ D + + + + E++I+R H NV+++
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYN 138
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
+ + L++V ++E A + E Q+ +L L H GV+HRD
Sbjct: 139 --SYLVGDELWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 195
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGATDYGVGVD 301
IK ++L+ DG +K++DFG + + + P +V T ++ PE L+ YG VD
Sbjct: 196 IKSDSILLTHDGRVKLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVD 252
Query: 302 LWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYK 361
+WS G ++ E++ G+P Y+ + L + + P +
Sbjct: 253 IWSLGIMVIEMVDGEP-----------------------PYFNEPPLKAMKMIRDNLPPR 289
Query: 362 RCIQETFKDFPPSSLPLIETLLAIDPAERLTAT 394
+ PS ++ LL DPA+R TA
Sbjct: 290 ---LKNLHKVSPSLKGFLDRLLVRDPAQRATAA 319
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 106/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D F++I +G G++ V K +G A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y PE++L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ ++ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKI 250
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 117/243 (48%), Gaps = 19/243 (7%)
Query: 104 GEALNGW-IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFM 162
G A + W IPR + E K+GQG + V+ T + VA+K ++ + PE+
Sbjct: 7 GLAKDAWEIPRESLRLEV--KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---F 60
Query: 163 AREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD--LAGLAASPEVKFTEPQVK 220
+E ++++L H +++L +V+ +Y+V YM L L PQ+
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSEE---PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN-HKHPMTSRV 279
Q+ SG+ + +HRD++ +N+L+ ++ V K+ADFGLA + N + ++
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG---RTEVEQLHKIYKLC 335
W P L G + + D+WS G +L EL G+ PG R ++Q+ + Y++
Sbjct: 178 PIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 235
Query: 336 GSP 338
P
Sbjct: 236 CPP 238
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 104/207 (50%), Gaps = 9/207 (4%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDML---TGKIVALKKVRFDNL--EPESVKFMAREILILR 170
++FE + +G G Y V+ + + TGK+ A+K ++ + + ++ + E +L
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 171 RLDH-PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSG 229
+ P ++ L + L+L+ Y+ S +FTE +V+ Y+ +++
Sbjct: 114 HIRQSPFLVTLH--YAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLA 171
Query: 230 LEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPEL 289
LEH H G+++RDIK N+L+D +G + + DFGL+ F + T+ Y P++
Sbjct: 172 LEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDI 231
Query: 290 LLGA-TDYGVGVDLWSAGCILAELLAG 315
+ G + + VD WS G ++ ELL G
Sbjct: 232 VRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 117/243 (48%), Gaps = 19/243 (7%)
Query: 104 GEALNGW-IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFM 162
G A + W IPR + E K+GQG + V+ T + VA+K ++ + PE+
Sbjct: 7 GLAKDAWEIPRESLRLEV--KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---F 60
Query: 163 AREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD--LAGLAASPEVKFTEPQVK 220
+E ++++L H +++L +V+ +Y+V YM L L PQ+
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSEE---PIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLV 117
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN-HKHPMTSRV 279
Q+ SG+ + +HRD++ +N+L+ ++ V K+ADFGLA + N + ++
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG---RTEVEQLHKIYKLC 335
W P L G + + D+WS G +L EL G+ PG R ++Q+ + Y++
Sbjct: 178 PIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 235
Query: 336 GSP 338
P
Sbjct: 236 CPP 238
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 105/201 (52%), Gaps = 11/201 (5%)
Query: 121 IDKI-GQGTYSNVYKAKDMLTGK---IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
IDK+ G G + V + L K VA+K ++ E + F+ E I+ + DHPN
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPN 107
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
+I+LEG+VT S + +V ME+ L + +FT Q+ + + SG+++ +
Sbjct: 108 IIRLEGVVTK--SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR--VVTLWYRPPELLLGA 293
G +HRD+ N+LI+ + V K++DFGL+ + + + T+R + + + PE +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAY 224
Query: 294 TDYGVGVDLWSAGCILAELLA 314
+ D+WS G +L E+++
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS 245
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 116/243 (47%), Gaps = 19/243 (7%)
Query: 104 GEALNGW-IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFM 162
G A + W IPR + E K+GQG + V+ T + VA+K ++ + PE+
Sbjct: 7 GLAKDAWEIPRESLRLEV--KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---F 60
Query: 163 AREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD--LAGLAASPEVKFTEPQVK 220
+E ++++L H +++L +V+ +Y+V YM L L PQ+
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSEE---PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP-MTSRV 279
Q+ SG+ + +HRD++ +N+L+ ++ V K+ADFGLA + N ++
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF 177
Query: 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG---RTEVEQLHKIYKLC 335
W P L G + + D+WS G +L EL G+ PG R ++Q+ + Y++
Sbjct: 178 PIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 235
Query: 336 GSP 338
P
Sbjct: 236 CPP 238
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 124/293 (42%), Gaps = 44/293 (15%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE----SVKFMAREILILRR 171
D +E +++G G ++ V K + TGK A K ++ L S + + RE+ ILR
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 172 LDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ HPN+I L + ++ L L +L A E TE + ++ Q+L G+
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILEL-VSGGELFDFLAEKE-SLTEDEATQFLKQILDGVH 143
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGV----LKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ H+ + H D+K N+++ D V +K+ DFG+A HK + ++ P
Sbjct: 144 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA------HKIEAGNEFKNIFGTPE 197
Query: 288 ELLLGATDY---GVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344
+ +Y G+ D+WS G I LL+G G T+ E L I + EEY+
Sbjct: 198 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFS 257
Query: 345 KSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
+ E KDF I LL DP R+ +L
Sbjct: 258 NT------------------SELAKDF-------IRRLLVKDPKRRMXIAQSL 285
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 111/242 (45%), Gaps = 19/242 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE----SVKFMAREILILRR 171
D +E +++G G ++ V K + TGK A K ++ L S + + RE+ ILR
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 172 LDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ HPN+I L + ++ L L +L A E TE + ++ Q+L G+
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILEL-VSGGELFDFLAEKE-SLTEDEATQFLKQILDGVH 129
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGV----LKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ H+ + H D+K N+++ D V +K+ DFG+A HK + ++ P
Sbjct: 130 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA------HKIEAGNEFKNIFGTPE 183
Query: 288 ELLLGATDY---GVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344
+ +Y G+ D+WS G I LL+G G T+ E L I + EEY+
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFS 243
Query: 345 KS 346
+
Sbjct: 244 NT 245
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 106/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D F++I +G G++ V K +G A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NL+ID G +++ DFG A K T Y PE+++ +
Sbjct: 159 SLDLIYRDLKPENLIIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIII-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH 174
+D +E + IG G + +D + ++VA+K + E+VK REI+ R L H
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK---REIINHRSLRH 74
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
PN+++ + ++ + L +V Y +F+E + + + QL+SG+ +CH
Sbjct: 75 PNIVRFKEVILT--PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 235 NNGVLHRDIKGSNLLIDDDGV--LKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
V HRD+K N L+D LKI FG + H P + V T Y PE+LL
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK-SSVLHSQPKDT-VGTPAYIAPEVLLK 190
Query: 293 ATDYGVGVDLWSAGCILAELLAG 315
G D+WS G L +L G
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 118 FEKIDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD 173
+KI +G+G + V Y + TG++VA+K ++ D P+ +EI ILR L
Sbjct: 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA-GPQHRSGWKQEIDILRTLY 91
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEPQVKCYMHQLLSGLEH 232
H ++IK +G + SL LV Y+ L L P Q+ + Q+ G+ +
Sbjct: 92 HEHIIKYKGCCEDAGAASLQLVMEYVP--LGSLRDYLPRHSIGLAQLLLFAQQICEGMAY 149
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR---VVTLWYRPPEL 289
H +HRD+ N+L+D+D ++KI DFGLA H+ WY P
Sbjct: 150 LHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPE-- 207
Query: 290 LLGATDYGVGVDLWSAGCILAELL 313
L + D+WS G L ELL
Sbjct: 208 CLKEYKFYYASDVWSFGVTLYELL 231
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 117/243 (48%), Gaps = 19/243 (7%)
Query: 104 GEALNGW-IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFM 162
G A + W IPR + E K+GQG + V+ T + VA+K ++ + PE+
Sbjct: 7 GLAKDAWEIPRESLRLEV--KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---F 60
Query: 163 AREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD--LAGLAASPEVKFTEPQVK 220
+E ++++L H +++L +V+ +Y+V YM L L PQ+
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN-HKHPMTSRV 279
Q+ SG+ + +HRD++ +N+L+ ++ V K+ADFGLA + N + ++
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG---RTEVEQLHKIYKLC 335
W P L G + + D+WS G +L EL G+ PG R ++Q+ + Y++
Sbjct: 178 PIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 235
Query: 336 GSP 338
P
Sbjct: 236 CPP 238
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 116/241 (48%), Gaps = 19/241 (7%)
Query: 106 ALNGW-IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
A + W IPR + E K+GQG + V+ T + VA+K ++ + PE+ +
Sbjct: 2 AKDAWEIPRESLRLEV--KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQ 55
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD--LAGLAASPEVKFTEPQVKCY 222
E ++++L H +++L +V+ +Y+V YM L L PQ+
Sbjct: 56 EAQVMKKLRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 112
Query: 223 MHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN-HKHPMTSRVVT 281
Q+ SG+ + +HRD++ +N+L+ ++ V K+ADFGLA + N + ++
Sbjct: 113 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 172
Query: 282 LWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG---RTEVEQLHKIYKLCGS 337
W P L G + + D+WS G +L EL G+ PG R ++Q+ + Y++
Sbjct: 173 KWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 230
Query: 338 P 338
P
Sbjct: 231 P 231
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 117/243 (48%), Gaps = 19/243 (7%)
Query: 104 GEALNGW-IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFM 162
G A + W IPR + E K+GQG + V+ T + VA+K ++ + PE+
Sbjct: 7 GLAKDAWEIPRESLRLEV--KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---F 60
Query: 163 AREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD--LAGLAASPEVKFTEPQVK 220
+E ++++L H +++L +V+ +Y+V YM L L PQ+
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSEE---PIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLV 117
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN-HKHPMTSRV 279
Q+ SG+ + +HRD++ +N+L+ ++ V K+ADFGLA + N + ++
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG---RTEVEQLHKIYKLC 335
W P L G + + D+WS G +L EL G+ PG R ++Q+ + Y++
Sbjct: 178 PIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 235
Query: 336 GSP 338
P
Sbjct: 236 CPP 238
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 117/243 (48%), Gaps = 19/243 (7%)
Query: 104 GEALNGW-IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFM 162
G A + W IPR + E K+GQG + V+ T + VA+K ++ + PE+
Sbjct: 7 GLAKDAWEIPRESLRLEV--KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---F 60
Query: 163 AREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD--LAGLAASPEVKFTEPQVK 220
+E ++++L H +++L +V+ +Y+V YM L L PQ+
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSEE---PIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN-HKHPMTSRV 279
Q+ SG+ + +HRD++ +N+L+ ++ V K+ADFGLA + N + ++
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG---RTEVEQLHKIYKLC 335
W P L G + + D+WS G +L EL G+ PG R ++Q+ + Y++
Sbjct: 178 PIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 235
Query: 336 GSP 338
P
Sbjct: 236 CPP 238
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 116/243 (47%), Gaps = 19/243 (7%)
Query: 104 GEALNGW-IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFM 162
G A + W IPR + E K+GQG + V+ T + VA+K ++ + PE+
Sbjct: 4 GLAKDAWEIPRESLRLEV--KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---F 57
Query: 163 AREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD--LAGLAASPEVKFTEPQVK 220
+E ++++L H +++L +V+ +Y+V YM L L PQ+
Sbjct: 58 LQEAQVMKKLRHEKLVQLYAVVSEE---PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLV 114
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH-KHPMTSRV 279
Q+ SG+ + +HRD++ +N+L+ ++ V K+ADFGLA + N ++
Sbjct: 115 DMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKF 174
Query: 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG---RTEVEQLHKIYKLC 335
W P L G + + D+WS G +L EL G+ PG R ++Q+ + Y++
Sbjct: 175 PIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 232
Query: 336 GSP 338
P
Sbjct: 233 CPP 235
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 8/217 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D F++I +G G++ V K +G A+K + + ++ + ++ E IL+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++KLE + + + +LY+V Y+ +F+EP + Y Q++ E+ H
Sbjct: 101 PFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K NLLID G +++ DFG A K T Y P ++L +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPAIIL-SK 213
Query: 295 DYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
Y VD W+ G ++ E+ AG P ++ KI
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 9/223 (4%)
Query: 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRL 172
+A+ +E + IG+G + V + T K+ A+K + +F+ ++ F E I+
Sbjct: 67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 126
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ P V++L + LY+V YM DL L ++ +V E + Y +++ L+
Sbjct: 127 NSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV--PEKWARFYTAEVVLALD 182
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLL 291
H+ G +HRD+K N+L+D G LK+ADFG + + V T Y PE+L
Sbjct: 183 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK 242
Query: 292 ---GATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
G YG D WS G L E+L G + V KI
Sbjct: 243 SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI 285
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 121 IDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+ ++G+G + +V Y TG++VA+KK++ E ++ REI IL+ L H N
Sbjct: 16 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 73
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
++K +G+ S +L L+ Y+ + L + + ++ Y Q+ G+E+
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 133
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH-----KHPMTSRVVTLWYRPPELL 290
+HR++ N+L++++ +KI DFGL + K P S + WY P L
Sbjct: 134 KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI--FWYAPESLT 191
Query: 291 LGATDYGVGVDLWSAGCILAELLA 314
+ + V D+WS G +L EL
Sbjct: 192 --ESKFSVASDVWSFGVVLYELFT 213
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 13/205 (6%)
Query: 118 FEKIDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD 173
+KI +G+G + V Y + TG++VA+K ++ D P+ +EI ILR L
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-CGPQHRSGWKQEIDILRTLY 74
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEPQVKCYMHQLLSGLEH 232
H ++IK +G + SL LV Y+ L L P Q+ + Q+ G+ +
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVP--LGSLRDYLPRHSIGLAQLLLFAQQICEGMAY 132
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR---VVTLWYRPPEL 289
H+ +HR++ N+L+D+D ++KI DFGLA H++ WY P
Sbjct: 133 LHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE-- 190
Query: 290 LLGATDYGVGVDLWSAGCILAELLA 314
L + D+WS G L ELL
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 112/261 (42%), Gaps = 49/261 (18%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALK---KVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
IGQG+Y V A + T I A+K K + + P+ V+ + E+ ++++L HPN+ +L
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 181 EGLVTSRMSCSLYLVFHYMEH----------DLAGLAASPEVKFT--------------- 215
+ L + + H D G A VK
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 216 -------------EPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGV--LKIAD 260
E + M Q+ S L + HN G+ HRDIK N L + +K+ D
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVD 213
Query: 261 FGLA-SFFDPNH--KHPMTSRVVTLWYRPPELLLGATD-YGVGVDLWSAGCILAELLAGK 316
FGL+ F+ N+ + MT++ T ++ PE+L + YG D WSAG +L LL G
Sbjct: 214 FGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGA 273
Query: 317 PIMPGRTEVEQLHKIY--KLC 335
PG + + + ++ KLC
Sbjct: 274 VPFPGVNDADTISQVLNKKLC 294
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 9/223 (4%)
Query: 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRL 172
+A+ +E + IG+G + V + T K+ A+K + +F+ ++ F E I+
Sbjct: 72 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 131
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ P V++L + LY+V YM DL L ++ +V E + Y +++ L+
Sbjct: 132 NSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV--PEKWARFYTAEVVLALD 187
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLL 291
H+ G +HRD+K N+L+D G LK+ADFG + + V T Y PE+L
Sbjct: 188 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK 247
Query: 292 ---GATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
G YG D WS G L E+L G + V KI
Sbjct: 248 SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI 290
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 15/212 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D +E + IG G + V A + VA+K++ + + S+ + +EI + + HP
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT-SMDELLKEIQAMSQCHHP 73
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHD-----LAGLAASPEVK---FTEPQVKCYMHQLL 227
N++ + + L+LV + + + A E K E + + ++L
Sbjct: 74 NIVSY--YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 228 SGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF----DPNHKHPMTSRVVTLW 283
GLE+ H NG +HRD+K N+L+ +DG ++IADFG+++F D + V T
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 284 YRPPELLLGATDYGVGVDLWSAGCILAELLAG 315
+ PE++ Y D+WS G EL G
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 9/207 (4%)
Query: 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRL 172
+A+ +E + IG+G + V + T K+ A+K + +F+ ++ F E I+
Sbjct: 72 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 131
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ P V++L + LY+V YM DL L ++ +V E + Y +++ L+
Sbjct: 132 NSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV--PEKWARFYTAEVVLALD 187
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLL 291
H+ G +HRD+K N+L+D G LK+ADFG + + V T Y PE+L
Sbjct: 188 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK 247
Query: 292 ---GATDYGVGVDLWSAGCILAELLAG 315
G YG D WS G L E+L G
Sbjct: 248 SQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 15/212 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D +E + IG G + V A + VA+K++ + + S+ + +EI + + HP
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT-SMDELLKEIQAMSQCHHP 68
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHD-----LAGLAASPEVK---FTEPQVKCYMHQLL 227
N++ + + L+LV + + + A E K E + + ++L
Sbjct: 69 NIVSY--YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 228 SGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF----DPNHKHPMTSRVVTLW 283
GLE+ H NG +HRD+K N+L+ +DG ++IADFG+++F D + V T
Sbjct: 127 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 284 YRPPELLLGATDYGVGVDLWSAGCILAELLAG 315
+ PE++ Y D+WS G EL G
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 123 KIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVI 178
++G+G + +V Y TG++VA+KK++ E ++ REI IL+ L H N++
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIV 77
Query: 179 KLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNG 237
K +G+ S +L L+ ++ + L + + ++ Y Q+ G+E+
Sbjct: 78 KYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 238 VLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH-----KHPMTSRVVTLWYRPPELLLG 292
+HRD+ N+L++++ +KI DFGL + K P S + WY P L
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWYAPESLT-- 193
Query: 293 ATDYGVGVDLWSAGCILAELLA 314
+ + V D+WS G +L EL
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 19/243 (7%)
Query: 104 GEALNGW-IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFM 162
G A + W IPR + E K+GQG + V+ T + VA+K ++ + PE+
Sbjct: 7 GLAKDAWEIPRESLRLEV--KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---F 60
Query: 163 AREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD--LAGLAASPEVKFTEPQVK 220
+E +++++ H +++L +V+ +Y+V YM L L PQ+
Sbjct: 61 LQEAQVMKKIRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN-HKHPMTSRV 279
Q+ SG+ + +HRD++ +N+L+ ++ V K+ADFGLA + N + ++
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG---RTEVEQLHKIYKLC 335
W P L G + + D+WS G +L EL G+ PG R ++Q+ + Y++
Sbjct: 178 PIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 235
Query: 336 GSP 338
P
Sbjct: 236 CPP 238
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDN-LEPESVKFMAREILILRRLDH 174
D FE + IG+G++ V + T K+ A+K + +E V+ + +E+ I++ L+H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++ L + + +++V + V F E VK ++ +L+ L++
Sbjct: 75 PFLVNL--WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQ 132
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLW----YRPPELL 290
N ++HRD+K N+L+D+ G + I DF +A+ P +++ T+ Y PE+
Sbjct: 133 NQRIIHRDMKPDNILLDEHGHVHITDFNIAAML------PRETQITTMAGTKPYMAPEMF 186
Query: 291 LG--ATDYGVGVDLWSAGCILAELLAGK 316
Y VD WS G ELL G+
Sbjct: 187 SSRKGAGYSFAVDWWSLGVTAYELLRGR 214
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 116/243 (47%), Gaps = 19/243 (7%)
Query: 104 GEALNGW-IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFM 162
G A + W IPR + E K+GQG + V+ T + VA+K ++ + PE+
Sbjct: 7 GLAKDAWEIPRESLRLEV--KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---F 60
Query: 163 AREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD--LAGLAASPEVKFTEPQVK 220
+E ++++L H +++L +V+ +Y+V YM L L PQ+
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN-HKHPMTSRV 279
Q+ SG+ + +HRD+ +N+L+ ++ V K+ADFGLA + N + ++
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 280 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG---RTEVEQLHKIYKLC 335
W P L G + + D+WS G +L EL G+ PG R ++Q+ + Y++
Sbjct: 178 PIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 235
Query: 336 GSP 338
P
Sbjct: 236 CPP 238
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 14/200 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGK---IVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
IG G + V L GK VA+K ++ E + F++ E I+ + DHPNVI L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLS-EASIMGQFDHPNVIHL 73
Query: 181 EGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
EG+VT S + ++ +ME+ L + +FT Q+ + + +G+++ + +
Sbjct: 74 EGVVTK--STPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYV 131
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLASFF-----DPNHKHPMTSRVVTLWYRPPELLLGAT 294
HR + N+L++ + V K++DFGL+ F DP + + ++ W P +
Sbjct: 132 HRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY--R 189
Query: 295 DYGVGVDLWSAGCILAELLA 314
+ D+WS G ++ E+++
Sbjct: 190 KFTSASDVWSYGIVMWEVMS 209
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 118 FEKIDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD 173
+KI +G+G + V Y + TG++VA+K ++ D P+ +EI ILR L
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-CGPQHRSGWKQEIDILRTLY 74
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEPQVKCYMHQLLSGLEH 232
H ++IK +G + SL LV Y+ L L P Q+ + Q+ G+ +
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVP--LGSLRDYLPRHSIGLAQLLLFAQQICEGMAY 132
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR---VVTLWYRPPEL 289
H +HR++ N+L+D+D ++KI DFGLA H++ WY P
Sbjct: 133 LHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE-- 190
Query: 290 LLGATDYGVGVDLWSAGCILAELLA 314
L + D+WS G L ELL
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 115/239 (48%), Gaps = 19/239 (7%)
Query: 108 NGW-IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREI 166
+ W IPR + E K+GQG + V+ T + VA+K ++ + PE+ +E
Sbjct: 2 DAWEIPRESLRLEV--KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEA 55
Query: 167 LILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD--LAGLAASPEVKFTEPQVKCYMH 224
++++L H +++L +V+ +Y+V YM L L PQ+
Sbjct: 56 QVMKKLRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 112
Query: 225 QLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN-HKHPMTSRVVTLW 283
Q+ SG+ + +HRD++ +N+L+ ++ V K+ADFGLA + N + ++ W
Sbjct: 113 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 172
Query: 284 YRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG---RTEVEQLHKIYKLCGSP 338
P L G + + D+WS G +L EL G+ PG R ++Q+ + Y++ P
Sbjct: 173 TAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 229
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 113/235 (48%), Gaps = 18/235 (7%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILR 170
IPR + E K+GQG + V+ T + VA+K ++ + PE+ +E +++
Sbjct: 4 IPRESLRLEV--KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEAQVMK 57
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD--LAGLAASPEVKFTEPQVKCYMHQLLS 228
+L H +++L +V+ +Y+V YM L L PQ+ Q+ S
Sbjct: 58 KLRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 114
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN-HKHPMTSRVVTLWYRPP 287
G+ + +HRD++ +N+L+ ++ V K+ADFGLA + N + ++ W P
Sbjct: 115 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 174
Query: 288 ELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG---RTEVEQLHKIYKLCGSP 338
L G + + D+WS G +L EL G+ PG R ++Q+ + Y++ P
Sbjct: 175 AALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 227
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 103/202 (50%), Gaps = 11/202 (5%)
Query: 120 KIDK-IGQGTYSNVYKAKDMLTGK---IVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
KI++ IG G + V + L GK VA+K ++ E + F+ E I+ + DHP
Sbjct: 46 KIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLC-EASIMGQFDHP 104
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
NV+ LEG+VT + +V +ME+ L + +FT Q+ + + +G+ +
Sbjct: 105 NVVHLEGVVTR--GKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLA 162
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF--DPNHKHPMTSRVVTLWYRPPELLLG 292
+ G +HRD+ N+L++ + V K++DFGL+ DP + T + + + PE +
Sbjct: 163 DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPE-AIQ 221
Query: 293 ATDYGVGVDLWSAGCILAELLA 314
+ D+WS G ++ E+++
Sbjct: 222 YRKFTSASDVWSYGIVMWEVMS 243
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 106/201 (52%), Gaps = 10/201 (4%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFD-NLEPESVKFMAREILILRRLDHP 175
F+ + +G G++ V+ + G+ A+K ++ + + + V+ E L+L + HP
Sbjct: 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP 66
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
+I++ G T + + ++++ Y+E +L L + +F P K Y ++ LE+ H
Sbjct: 67 FIIRMWG--TFQDAQQIFMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLH 123
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
+ +++RD+K N+L+D +G +KI DFG A + P+ + + T Y PE ++
Sbjct: 124 SKDIIYRDLKPENILLDKNGHIKITDFGFAKYV-PDVTYXLCG---TPDYIAPE-VVSTK 178
Query: 295 DYGVGVDLWSAGCILAELLAG 315
Y +D WS G ++ E+LAG
Sbjct: 179 PYNKSIDWWSFGILIYEMLAG 199
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 6/203 (2%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDH 174
+ FE + +G+GT+ V K+ TG+ A+K ++ + + + V E +L+ H
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P + L+ + + L V Y S E F+E + + Y +++S L++ H
Sbjct: 208 PFLTALK--YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 265
Query: 235 N-NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
+ V++RD+K NL++D DG +KI DFGL M + T Y PE +L
Sbjct: 266 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEYLAPE-VLED 323
Query: 294 TDYGVGVDLWSAGCILAELLAGK 316
DYG VD W G ++ E++ G+
Sbjct: 324 NDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 6/203 (2%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDH 174
+ FE + +G+GT+ V K+ TG+ A+K ++ + + + V E +L+ H
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P + L+ + + L V Y S E F+E + + Y +++S L++ H
Sbjct: 211 PFLTALK--YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 268
Query: 235 N-NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
+ V++RD+K NL++D DG +KI DFGL M + T Y PE +L
Sbjct: 269 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEYLAPE-VLED 326
Query: 294 TDYGVGVDLWSAGCILAELLAGK 316
DYG VD W G ++ E++ G+
Sbjct: 327 NDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 119/241 (49%), Gaps = 19/241 (7%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILR 170
+PR ++ + ++++G G + V+ K VA+K ++ ++ P++ F+A E +++
Sbjct: 11 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 64
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPE-VKFTEPQVKCYMHQLLS 228
+L H +++L +VT +Y++ YME+ L +P +K T ++ Q+
Sbjct: 65 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 121
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
G+ +HRD++ +N+L+ D KIADFGLA + N + + PE
Sbjct: 122 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 181
Query: 289 LLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTE---VEQLHKIYKLC---GSPSEE 341
+ T + + D+WS G +L E++ G+ PG T ++ L + Y++ P E
Sbjct: 182 AINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 240
Query: 342 Y 342
Y
Sbjct: 241 Y 241
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 116/231 (50%), Gaps = 16/231 (6%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILR 170
+PR ++ + ++++G G + V+ K VA+K ++ ++ P++ F+A E +++
Sbjct: 18 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 71
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPE-VKFTEPQVKCYMHQLLS 228
+L H +++L +VT +Y++ YME+ L +P +K T ++ Q+
Sbjct: 72 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 128
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
G+ +HRD++ +N+L+ D KIADFGLA + N + + PE
Sbjct: 129 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 188
Query: 289 LLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTE---VEQLHKIYKLC 335
+ T + + D+WS G +L E++ G+ PG T ++ L + Y++
Sbjct: 189 AINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 238
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 119/241 (49%), Gaps = 19/241 (7%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILR 170
+PR ++ + ++++G G + V+ K VA+K ++ ++ P++ F+A E +++
Sbjct: 12 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 65
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPE-VKFTEPQVKCYMHQLLS 228
+L H +++L +VT +Y++ YME+ L +P +K T ++ Q+
Sbjct: 66 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 122
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
G+ +HRD++ +N+L+ D KIADFGLA + N + + PE
Sbjct: 123 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 182
Query: 289 LLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTE---VEQLHKIYKLC---GSPSEE 341
+ T + + D+WS G +L E++ G+ PG T ++ L + Y++ P E
Sbjct: 183 AINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 241
Query: 342 Y 342
Y
Sbjct: 242 Y 242
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 119/241 (49%), Gaps = 19/241 (7%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILR 170
+PR ++ + ++++G G + V+ K VA+K ++ ++ P++ F+A E +++
Sbjct: 16 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 69
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPE-VKFTEPQVKCYMHQLLS 228
+L H +++L +VT +Y++ YME+ L +P +K T ++ Q+
Sbjct: 70 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 126
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
G+ +HRD++ +N+L+ D KIADFGLA + N + + PE
Sbjct: 127 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 186
Query: 289 LLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTE---VEQLHKIYKLC---GSPSEE 341
+ T + + D+WS G +L E++ G+ PG T ++ L + Y++ P E
Sbjct: 187 AINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 245
Query: 342 Y 342
Y
Sbjct: 246 Y 246
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 128/287 (44%), Gaps = 44/287 (15%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
K+G G + +V+ ++ +G +K + D + + A EI +L+ LDHPN+IK+
Sbjct: 29 KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEA-EIEVLKSLDHPNIIKIFE 87
Query: 183 LVTSRMSCSLYLVFHYMEH-DLAGLAASPEVK---FTEPQVKCYMHQLLSGLEHCHNNGV 238
+ + +Y+V E +L S + + +E V M Q+++ L + H+ V
Sbjct: 88 VFEDYHN--MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHV 145
Query: 239 LHRDIKGSNLLIDD---DGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATD 295
+H+D+K N+L D +KI DFGLA F + T+ T Y PE+ D
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS--TNAAGTALYMAPEVF--KRD 201
Query: 296 YGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS--KLPNATL 353
D+WSAG ++ LL G +P G+ EE +K+ K PN +
Sbjct: 202 VTFKCDIWSAGVVMYFLLTG--CLP-------------FTGTSLEEVQQKATYKEPNYAV 246
Query: 354 FKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSE 400
C + P ++ L++ +L DP R +A L+ E
Sbjct: 247 --------EC-----RPLTPQAVDLLKQMLTKDPERRPSAAQVLHHE 280
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 119/241 (49%), Gaps = 19/241 (7%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILR 170
+PR ++ + ++++G G + V+ K VA+K ++ ++ P++ F+A E +++
Sbjct: 10 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 63
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPE-VKFTEPQVKCYMHQLLS 228
+L H +++L +VT +Y++ YME+ L +P +K T ++ Q+
Sbjct: 64 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
G+ +HRD++ +N+L+ D KIADFGLA + N + + PE
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 180
Query: 289 LLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTE---VEQLHKIYKLC---GSPSEE 341
+ T + + D+WS G +L E++ G+ PG T ++ L + Y++ P E
Sbjct: 181 AINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 239
Query: 342 Y 342
Y
Sbjct: 240 Y 240
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 11/229 (4%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D +E IG+G++ V KA D + + VA+K ++ + R + ++ + D
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTE 113
Query: 176 NVIKLEGLVTSRM-SCSLYLVFHYMEHDLAGLAASPEVKFTEPQV-KCYMHQLLSGLEHC 233
+ L M L LVF + ++L L + + + + + Q+ + L
Sbjct: 114 MKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 173
Query: 234 HNN--GVLHRDIKGSNLLIDD--DGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPEL 289
++H D+K N+L+ + +KI DFG + + SR +YR PE+
Sbjct: 174 ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSR----FYRSPEV 229
Query: 290 LLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
LLG Y + +D+WS GCIL E+ G+P+ G EV+Q++KI ++ G P
Sbjct: 230 LLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 11/229 (4%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D +E IG+G++ V KA D + + VA+K ++ + R + ++ + D
Sbjct: 35 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTE 94
Query: 176 NVIKLEGLVTSRM-SCSLYLVFHYMEHDLAGLAASPEVKFTEPQV-KCYMHQLLSGLEHC 233
+ L M L LVF + ++L L + + + + + Q+ + L
Sbjct: 95 MKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 154
Query: 234 HNN--GVLHRDIKGSNLLIDD--DGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPEL 289
++H D+K N+L+ + +KI DFG + + SR +YR PE+
Sbjct: 155 ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSR----FYRSPEV 210
Query: 290 LLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
LLG Y + +D+WS GCIL E+ G+P+ G EV+Q++KI ++ G P
Sbjct: 211 LLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 258
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 119/241 (49%), Gaps = 19/241 (7%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILR 170
+PR ++ + ++++G G + V+ K VA+K ++ ++ P++ F+A E +++
Sbjct: 10 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 63
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPE-VKFTEPQVKCYMHQLLS 228
+L H +++L +VT +Y++ YME+ L +P +K T ++ Q+
Sbjct: 64 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
G+ +HRD++ +N+L+ D KIADFGLA + N + + PE
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 180
Query: 289 LLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTE---VEQLHKIYKLC---GSPSEE 341
+ T + + D+WS G +L E++ G+ PG T ++ L + Y++ P E
Sbjct: 181 AINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 239
Query: 342 Y 342
Y
Sbjct: 240 Y 240
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 119/241 (49%), Gaps = 19/241 (7%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILR 170
+PR ++ + ++++G G + V+ K VA+K ++ ++ P++ F+A E +++
Sbjct: 19 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 72
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPE-VKFTEPQVKCYMHQLLS 228
+L H +++L +VT +Y++ YME+ L +P +K T ++ Q+
Sbjct: 73 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 129
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
G+ +HRD++ +N+L+ D KIADFGLA + N + + PE
Sbjct: 130 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 189
Query: 289 LLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTE---VEQLHKIYKLC---GSPSEE 341
+ T + + D+WS G +L E++ G+ PG T ++ L + Y++ P E
Sbjct: 190 AINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 248
Query: 342 Y 342
Y
Sbjct: 249 Y 249
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 120/244 (49%), Gaps = 25/244 (10%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILR 170
+PR ++ + ++++G G + V+ K VA+K ++ ++ P++ F+A E +++
Sbjct: 10 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 63
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPE-VKFTEPQVKCYMHQLLS 228
+L H +++L +VT +Y++ YME+ L +P +K T ++ Q+
Sbjct: 64 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
G+ +HRD++ +N+L+ D KIADFGLA + N + + PE
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 180
Query: 289 LLLGATDYG---VGVDLWSAGCILAELLA-GKPIMPGRTE---VEQLHKIYKLC---GSP 338
A +YG + D+WS G +L E++ G+ PG T ++ L + Y++ P
Sbjct: 181 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 236
Query: 339 SEEY 342
E Y
Sbjct: 237 EELY 240
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 119/241 (49%), Gaps = 19/241 (7%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILR 170
+PR ++ + ++++G G + V+ K VA+K ++ ++ P++ F+A E +++
Sbjct: 15 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 68
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPE-VKFTEPQVKCYMHQLLS 228
+L H +++L +VT +Y++ YME+ L +P +K T ++ Q+
Sbjct: 69 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 125
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
G+ +HRD++ +N+L+ D KIADFGLA + N + + PE
Sbjct: 126 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 185
Query: 289 LLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTE---VEQLHKIYKLC---GSPSEE 341
+ T + + D+WS G +L E++ G+ PG T ++ L + Y++ P E
Sbjct: 186 AINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 244
Query: 342 Y 342
Y
Sbjct: 245 Y 245
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 119/241 (49%), Gaps = 19/241 (7%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILR 170
+PR ++ + ++++G G + V+ K VA+K ++ ++ P++ F+A E +++
Sbjct: 16 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 69
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPE-VKFTEPQVKCYMHQLLS 228
+L H +++L +VT +Y++ YME+ L +P +K T ++ Q+
Sbjct: 70 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 126
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
G+ +HRD++ +N+L+ D KIADFGLA + N + + PE
Sbjct: 127 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 186
Query: 289 LLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTE---VEQLHKIYKLC---GSPSEE 341
+ T + + D+WS G +L E++ G+ PG T ++ L + Y++ P E
Sbjct: 187 AINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 245
Query: 342 Y 342
Y
Sbjct: 246 Y 246
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 131/276 (47%), Gaps = 36/276 (13%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILR 170
+PR ++ + ++++G G + V+ K VA+K ++ ++ P++ F+A E +++
Sbjct: 5 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 58
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPE-VKFTEPQVKCYMHQLLS 228
+L H +++L +VT +Y++ YME+ L +P +K T ++ Q+
Sbjct: 59 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 115
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
G+ +HRD++ +N+L+ D KIADFGLA + N + + PE
Sbjct: 116 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 175
Query: 289 LLLGATDYG---VGVDLWSAGCILAELLA-GKPIMPGRTE---VEQLHKIYKLC---GSP 338
A +YG + D+WS G +L E++ G+ PG T ++ L + Y++ P
Sbjct: 176 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 231
Query: 339 SEEY------WKKSKLPNATLFKPREPYKRCIQETF 368
E Y WK+ P +P Y R + E F
Sbjct: 232 EELYQLMRLCWKER--PED---RPTFDYLRSVLEDF 262
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 22/204 (10%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
+IG G++ VYK K G VA+K + P+ ++ E+ +LR+ H N++ G
Sbjct: 31 RIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 183 LVTS------RMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
T+ C ++H++ + E KF ++ Q G+++ H
Sbjct: 88 YSTAPQLAIVTQWCEGSSLYHHLH--------ASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 237 GVLHRDIKGSNLLIDDDGVLKIADFGLA---SFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
++HRD+K +N+ + +D +KI DFGLA S + +H+ S + LW P + +
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSI-LWMAPEVIRMQD 198
Query: 294 TD-YGVGVDLWSAGCILAELLAGK 316
++ Y D+++ G +L EL+ G+
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 105/205 (51%), Gaps = 18/205 (8%)
Query: 122 DKIGQGTYSNVYKAKDMLTGKIVALKKV--RFDNLEPESVKFMAREILILRRLDHPNVIK 179
+K+G+G + VYK + VA+KK+ D E + +EI ++ + H N+++
Sbjct: 37 NKMGEGGFGVVYKG--YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 94
Query: 180 LEGLVTSRMSCSLYLVFHYMEHD-----LAGLAASPEVKFTEPQVKCYMHQ-LLSGLEHC 233
L G S L LV+ YM + L+ L +P + + ++C + Q +G+
Sbjct: 95 LLGF--SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW---HMRCKIAQGAANGINFL 149
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLG 292
H N +HRDIK +N+L+D+ KI+DFGLA + + M SR+V T Y PE L G
Sbjct: 150 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG 209
Query: 293 ATDYGVGVDLWSAGCILAELLAGKP 317
+ D++S G +L E++ G P
Sbjct: 210 --EITPKSDIYSFGVVLLEIITGLP 232
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 11/229 (4%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
D +E IG+G++ V KA D + + VA+K ++ + R + ++ + D
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTE 113
Query: 176 NVIKLEGLVTSRM-SCSLYLVFHYMEHDLAGLAASPEVKFTEPQV-KCYMHQLLSGLEHC 233
+ L M L LVF + ++L L + + + + + Q+ + L
Sbjct: 114 MKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 173
Query: 234 HNN--GVLHRDIKGSNLLIDD--DGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPEL 289
++H D+K N+L+ + +KI DFG + + SR +YR PE+
Sbjct: 174 ATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSR----FYRSPEV 229
Query: 290 LLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 338
LLG Y + +D+WS GCIL E+ G+P+ G EV+Q++KI ++ G P
Sbjct: 230 LLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 116/231 (50%), Gaps = 16/231 (6%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILR 170
+PR ++ + ++++G G + V+ K VA+K ++ ++ P++ F+A E +++
Sbjct: 20 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 73
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPE-VKFTEPQVKCYMHQLLS 228
+L H +++L +VT +Y++ YME+ L +P +K T ++ Q+
Sbjct: 74 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 130
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
G+ +HRD++ +N+L+ D KIADFGLA + N + + PE
Sbjct: 131 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 190
Query: 289 LLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTE---VEQLHKIYKLC 335
+ T + + D+WS G +L E++ G+ PG T ++ L + Y++
Sbjct: 191 AINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 240
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 107/203 (52%), Gaps = 13/203 (6%)
Query: 120 KIDK-IGQGTYSNVYKAKDMLTGK---IVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
KI+K IG G + V + + GK VA+K ++ + + F++ E I+ + DHP
Sbjct: 32 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS-EASIMGQFDHP 90
Query: 176 NVIKLEGLVTSRMSCS-LYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
N+I LEG+VT C + ++ YME+ L + +FT Q+ + + SG+++
Sbjct: 91 NIIHLEGVVTK---CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 147
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR--VVTLWYRPPELLL 291
+ +HRD+ N+L++ + V K++DFG++ + + + T+R + + + PE +
Sbjct: 148 SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE-AI 206
Query: 292 GATDYGVGVDLWSAGCILAELLA 314
+ D+WS G ++ E+++
Sbjct: 207 AYRKFTSASDVWSYGIVMWEVMS 229
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 98/204 (48%), Gaps = 22/204 (10%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
+IG G++ VYK K G VA+K + P+ ++ E+ +LR+ H N++ G
Sbjct: 31 RIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 183 LVTS------RMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
T C ++H++ + E KF ++ Q G+++ H
Sbjct: 88 YSTKPQLAIVTQWCEGSSLYHHLH--------ASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 237 GVLHRDIKGSNLLIDDDGVLKIADFGLA---SFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
++HRD+K +N+ + +D +KI DFGLA S + +H+ S + LW P + +
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSI-LWMAPEVIRMQD 198
Query: 294 TD-YGVGVDLWSAGCILAELLAGK 316
++ Y D+++ G +L EL+ G+
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 12/199 (6%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
+IG G++ VYK K G VA+K + P+ ++ E+ +LR+ H N++ G
Sbjct: 19 RIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 183 LVTSRMSCSLYLVFHYME-HDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHR 241
T L +V + E L + E KF ++ Q G+++ H ++HR
Sbjct: 76 YSTK---PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHR 132
Query: 242 DIKGSNLLIDDDGVLKIADFGLA---SFFDPNHKHPMTSRVVTLWYRPPELLLGATD-YG 297
D+K +N+ + +D +KI DFGLA S + +H+ S + LW P + + ++ Y
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSI-LWMAPEVIRMQDSNPYS 191
Query: 298 VGVDLWSAGCILAELLAGK 316
D+++ G +L EL+ G+
Sbjct: 192 FQSDVYAFGIVLYELMTGQ 210
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 15/198 (7%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
++G+G++ V++ +D TG A+KKVR + F A E++ L P ++ L G
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLE-------VFRAEELMACAGLTSPRIVPLYG 152
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
V R + + +E G + E + Y+ Q L GLE+ H+ +LH D
Sbjct: 153 AV--REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGD 210
Query: 243 IKGSNLLIDDDGV-LKIADFGLASFFDPN--HKHPMTSRVV--TLWYRPPELLLGATDYG 297
+K N+L+ DG + DFG A P+ K +T + T + PE++LG +
Sbjct: 211 VKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS-CD 269
Query: 298 VGVDLWSAGCILAELLAG 315
VD+WS+ C++ +L G
Sbjct: 270 AKVDVWSSCCMMLHMLNG 287
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 20/225 (8%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDN-LEPESVK--FMAREILILRRL 172
D+FE I +G+G++ V A+ TG + A+K ++ D L+ + V+ + IL L R
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR- 81
Query: 173 DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
+HP + +L + L+ V ++ +F E + + Y +++S L
Sbjct: 82 NHPFLTQL--FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMF 139
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLW------YRP 286
H+ G+++RD+K N+L+D +G K+ADFG+ K + + V T Y
Sbjct: 140 LHDKGIIYRDLKLDNVLLDHEGHCKLADFGMC-------KEGICNGVTTATFCGTPDYIA 192
Query: 287 PELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
PE+L YG VD W+ G +L E+L G E + I
Sbjct: 193 PEILQEML-YGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI 236
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 10/205 (4%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDH 174
+ FE + +G+GT+ V K+ TG+ A+K ++ + + + V E +L+ H
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P + L+ + + L V Y S E F+E + + Y +++S L++ H
Sbjct: 69 PFLTALK--YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 126
Query: 235 N-NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV--TLWYRPPELLL 291
+ V++RD+K NL++D DG +KI DFGL K T + T Y PE +L
Sbjct: 127 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAPE-VL 182
Query: 292 GATDYGVGVDLWSAGCILAELLAGK 316
DYG VD W G ++ E++ G+
Sbjct: 183 EDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 107/203 (52%), Gaps = 13/203 (6%)
Query: 120 KIDK-IGQGTYSNVYKAKDMLTGK---IVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
KI+K IG G + V + + GK VA+K ++ + + F++ E I+ + DHP
Sbjct: 17 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS-EASIMGQFDHP 75
Query: 176 NVIKLEGLVTSRMSCS-LYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
N+I LEG+VT C + ++ YME+ L + +FT Q+ + + SG+++
Sbjct: 76 NIIHLEGVVTK---CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 132
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR--VVTLWYRPPELLL 291
+ +HRD+ N+L++ + V K++DFG++ + + + T+R + + + PE +
Sbjct: 133 SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE-AI 191
Query: 292 GATDYGVGVDLWSAGCILAELLA 314
+ D+WS G ++ E+++
Sbjct: 192 AYRKFTSASDVWSYGIVMWEVMS 214
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 18/231 (7%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILR 170
IPR +S + I ++G G + V+ K VA+K ++ + PES E I++
Sbjct: 6 IPR--ESLQLIKRLGNGQFGEVWMGTWNGNTK-VAIKTLKPGTMSPES---FLEEAQIMK 59
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD--LAGLAASPEVKFTEPQVKCYMHQLLS 228
+L H +++L +V+ +Y+V YM L L P + Q+ +
Sbjct: 60 KLKHDKLVQLYAVVSEE---PIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAA 116
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP-MTSRVVTLWYRPP 287
G+ + +HRD++ +N+L+ + + KIADFGLA + N ++ W P
Sbjct: 117 GMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPE 176
Query: 288 ELLLGATDYGVGVDLWSAGCILAELLA-GK---PIMPGRTEVEQLHKIYKL 334
L G + + D+WS G +L EL+ G+ P M R +EQ+ + Y++
Sbjct: 177 AALYGR--FTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRM 225
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 10/205 (4%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDH 174
+ FE + +G+GT+ V K+ TG+ A+K ++ + + + V E +L+ H
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P + L+ + + L V Y S E F+E + + Y +++S L++ H
Sbjct: 68 PFLTALK--YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 125
Query: 235 N-NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV--TLWYRPPELLL 291
+ V++RD+K NL++D DG +KI DFGL K T + T Y PE +L
Sbjct: 126 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAPE-VL 181
Query: 292 GATDYGVGVDLWSAGCILAELLAGK 316
DYG VD W G ++ E++ G+
Sbjct: 182 EDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 15/198 (7%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
++G+G++ V++ +D TG A+KKVR + F A E++ L P ++ L G
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLE-------VFRAEELMACAGLTSPRIVPLYG 133
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
V R + + +E G + E + Y+ Q L GLE+ H+ +LH D
Sbjct: 134 AV--REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGD 191
Query: 243 IKGSNLLIDDDGV-LKIADFGLASFFDPN--HKHPMTSRVV--TLWYRPPELLLGATDYG 297
+K N+L+ DG + DFG A P+ K +T + T + PE++LG +
Sbjct: 192 VKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS-CD 250
Query: 298 VGVDLWSAGCILAELLAG 315
VD+WS+ C++ +L G
Sbjct: 251 AKVDVWSSCCMMLHMLNG 268
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 10/205 (4%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDH 174
+ FE + +G+GT+ V K+ TG+ A+K ++ + + + V E +L+ H
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P + L+ + + L V Y S E F+E + + Y +++S L++ H
Sbjct: 70 PFLTALK--YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 127
Query: 235 N-NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV--TLWYRPPELLL 291
+ V++RD+K NL++D DG +KI DFGL K T + T Y PE +L
Sbjct: 128 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAPE-VL 183
Query: 292 GATDYGVGVDLWSAGCILAELLAGK 316
DYG VD W G ++ E++ G+
Sbjct: 184 EDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 107/203 (52%), Gaps = 13/203 (6%)
Query: 120 KIDK-IGQGTYSNVYKAKDMLTGK---IVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
KI+K IG G + V + + GK VA+K ++ + + F++ E I+ + DHP
Sbjct: 11 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS-EASIMGQFDHP 69
Query: 176 NVIKLEGLVTSRMSCS-LYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
N+I LEG+VT C + ++ YME+ L + +FT Q+ + + SG+++
Sbjct: 70 NIIHLEGVVTK---CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 126
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR--VVTLWYRPPELLL 291
+ +HRD+ N+L++ + V K++DFG++ + + + T+R + + + PE +
Sbjct: 127 SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE-AI 185
Query: 292 GATDYGVGVDLWSAGCILAELLA 314
+ D+WS G ++ E+++
Sbjct: 186 AYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 33/181 (18%)
Query: 214 FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273
F EP+ Y Q++SGLEH H +++RD+K N+L+DDDG ++I+D GLA
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
Query: 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYK 333
T + PELLLG +Y VD ++ G L E++A + R E
Sbjct: 346 -TKGYAGTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPFRARGE--------- 394
Query: 334 LCGSPSEEYWKKSKLPNATLFKPREPYKRCIQE--TFKD-FPPSSLPLIETLLAIDPAER 390
K+ N +E +R +++ T+ D F P+S E LL DP +R
Sbjct: 395 -------------KVEN------KELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
Query: 391 L 391
L
Sbjct: 436 L 436
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 33/181 (18%)
Query: 214 FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273
F EP+ Y Q++SGLEH H +++RD+K N+L+DDDG ++I+D GLA
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
Query: 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYK 333
T + PELLLG +Y VD ++ G L E++A + R E
Sbjct: 346 -TKGYAGTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPFRARGE--------- 394
Query: 334 LCGSPSEEYWKKSKLPNATLFKPREPYKRCIQE--TFKD-FPPSSLPLIETLLAIDPAER 390
K+ N +E +R +++ T+ D F P+S E LL DP +R
Sbjct: 395 -------------KVEN------KELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
Query: 391 L 391
L
Sbjct: 436 L 436
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 110/239 (46%), Gaps = 29/239 (12%)
Query: 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDN---LEPESVKFMAREILILRRLDHPNVI 178
D +GQG +NV++ + TG + A+K F+N L P V+ RE +L++L+H N++
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKV--FNNISFLRPVDVQM--REFEVLKKLNHKNIV 70
Query: 179 KLEGLVTSRMSCSLYLVFHYME-HDLAGLAASPEVKFTEPQVK--CYMHQLLSGLEHCHN 235
KL + + L+ + L + P + P+ + + ++ G+ H
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 236 NGVLHRDIKGSNLL--IDDDG--VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLL 291
NG++HR+IK N++ I +DG V K+ DFG A + + + S T Y P++
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ--FVSLYGTEEYLHPDMYE 188
Query: 292 GAT-------DYGVGVDLWSAGCILAELLAG----KPIMPGRTEVEQLHKIYKLCGSPS 339
A YG VDLWS G G +P R E ++KI + G PS
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI--ITGKPS 245
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 33/181 (18%)
Query: 214 FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273
F EP+ Y Q++SGLEH H +++RD+K N+L+DDDG ++I+D GLA
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
Query: 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYK 333
T + PELLLG +Y VD ++ G L E++A + R E
Sbjct: 346 -TKGYAGTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPFRARGE--------- 394
Query: 334 LCGSPSEEYWKKSKLPNATLFKPREPYKRCIQE--TFKD-FPPSSLPLIETLLAIDPAER 390
K+ N +E +R +++ T+ D F P+S E LL DP +R
Sbjct: 395 -------------KVEN------KELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
Query: 391 L 391
L
Sbjct: 436 L 436
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 113/239 (47%), Gaps = 19/239 (7%)
Query: 108 NGW-IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREI 166
+ W IPR + E K+GQG + V+ T + VA+K ++ + PE+ +E
Sbjct: 1 DAWEIPRESLRLEV--KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEA---FLQEA 54
Query: 167 LILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD--LAGLAASPEVKFTEPQVKCYMH 224
++++L H +++L +V+ + +V YM L L PQ+
Sbjct: 55 QVMKKLRHEKLVQLYAVVSEE---PIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 111
Query: 225 QLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP-MTSRVVTLW 283
Q+ SG+ + +HRD++ +N+L+ ++ V K+ADFGLA + N ++ W
Sbjct: 112 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW 171
Query: 284 YRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG---RTEVEQLHKIYKLCGSP 338
P L G + + D+WS G +L EL G+ PG R ++Q+ + Y++ P
Sbjct: 172 TAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 228
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 33/181 (18%)
Query: 214 FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273
F EP+ Y Q++SGLEH H +++RD+K N+L+DDDG ++I+D GLA
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
Query: 274 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYK 333
T + PELLLG +Y VD ++ G L E++A + R E
Sbjct: 346 -TKGYAGTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPFRARGE--------- 394
Query: 334 LCGSPSEEYWKKSKLPNATLFKPREPYKRCIQE--TFKD-FPPSSLPLIETLLAIDPAER 390
K+ N +E +R +++ T+ D F P+S E LL DP +R
Sbjct: 395 -------------KVEN------KELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
Query: 391 L 391
L
Sbjct: 436 L 436
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 131/276 (47%), Gaps = 36/276 (13%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILR 170
+PR ++ + ++++G G + V+ K VA+K ++ ++ P++ F+A E +++
Sbjct: 6 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 59
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPE-VKFTEPQVKCYMHQLLS 228
+L H +++L +VT +Y++ YME+ L +P +K T ++ Q+
Sbjct: 60 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 116
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPE 288
G+ +HR+++ +N+L+ D KIADFGLA + N + + PE
Sbjct: 117 GMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 176
Query: 289 LLLGATDYG---VGVDLWSAGCILAELLA-GKPIMPGRTE---VEQLHKIYKLC---GSP 338
A +YG + D+WS G +L E++ G+ PG T ++ L + Y++ P
Sbjct: 177 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 232
Query: 339 SEEY------WKKSKLPNATLFKPREPYKRCIQETF 368
E Y WK+ P +P Y R + E F
Sbjct: 233 EELYQLMRLCWKER--PED---RPTFDYLRSVLEDF 263
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 118 FEKIDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD 173
+KI +G+G + V Y + TG++VA+K ++ + P+ REI ILR L
Sbjct: 11 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-EGCGPQLRSGWQREIEILRTLY 69
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEPQVKCYMHQLLSGLEH 232
H +++K +G + S+ LV Y+ L L P Q+ + Q+ G+ +
Sbjct: 70 HEHIVKYKGCCEDQGEKSVQLVMEYV--PLGSLRDYLPRHCVGLAQLLLFAQQICEGMAY 127
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR---VVTLWYRPPEL 289
H +HR + N+L+D+D ++KI DFGLA H++ WY P
Sbjct: 128 LHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE-- 185
Query: 290 LLGATDYGVGVDLWSAGCILAELLA 314
L + D+WS G L ELL
Sbjct: 186 CLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 118 FEKIDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD 173
+KI +G+G + V Y + TG++VA+K ++ + P+ REI ILR L
Sbjct: 10 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-EGCGPQLRSGWQREIEILRTLY 68
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAAS-PEVKFTEPQVKCYMHQLLSGLEH 232
H +++K +G + S+ LV Y+ L L P Q+ + Q+ G+ +
Sbjct: 69 HEHIVKYKGCCEDQGEKSVQLVMEYV--PLGSLRDYLPRHCVGLAQLLLFAQQICEGMAY 126
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR---VVTLWYRPPEL 289
H +HR + N+L+D+D ++KI DFGLA H++ WY P
Sbjct: 127 LHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE-- 184
Query: 290 LLGATDYGVGVDLWSAGCILAELLA 314
L + D+WS G L ELL
Sbjct: 185 CLKECKFYYASDVWSFGVTLYELLT 209
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 18/205 (8%)
Query: 122 DKIGQGTYSNVYKAKDMLTGKIVALKKV--RFDNLEPESVKFMAREILILRRLDHPNVIK 179
+K+G+G + VYK + VA+KK+ D E + +EI ++ + H N+++
Sbjct: 37 NKMGEGGFGVVYKG--YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 94
Query: 180 LEGLVTSRMSCSLYLVFHYMEHD-----LAGLAASPEVKFTEPQVKCYMHQ-LLSGLEHC 233
L G S L LV+ YM + L+ L +P + + ++C + Q +G+
Sbjct: 95 LLGF--SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW---HMRCKIAQGAANGINFL 149
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLG 292
H N +HRDIK +N+L+D+ KI+DFGLA + + M R+V T Y PE L G
Sbjct: 150 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG 209
Query: 293 ATDYGVGVDLWSAGCILAELLAGKP 317
+ D++S G +L E++ G P
Sbjct: 210 --EITPKSDIYSFGVVLLEIITGLP 232
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 14/224 (6%)
Query: 114 RADSFEKIDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILIL 169
+ F + IG+G++ V +KA+++ V KK E + + M+ ++L
Sbjct: 36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHI--MSERNVLL 93
Query: 170 RRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSG 229
+ + HP ++ L + + + LY V Y+ E F EP+ + Y ++ S
Sbjct: 94 KNVKHPFLVGLH--FSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASA 151
Query: 230 LEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV--TLWYRPP 287
L + H+ +++RD+K N+L+D G + + DFGL N +H T+ T Y P
Sbjct: 152 LGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCGTPEYLAP 208
Query: 288 ELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
E +L Y VD W G +L E+L G P R E I
Sbjct: 209 E-VLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNI 251
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 14/217 (6%)
Query: 120 KIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRLDHPNVI 178
K + +G G + V+K ++ TG +A K ++ + + E VK EI ++ +LDH N+I
Sbjct: 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVK---NEISVMNQLDHANLI 149
Query: 179 KLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNG 237
+L S+ + LV Y++ +L TE +M Q+ G+ H H
Sbjct: 150 QLYDAFESK--NDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY 207
Query: 238 VLHRDIKGSNLLI--DDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATD 295
+LH D+K N+L D +KI DFGLA + P K + T + PE++ D
Sbjct: 208 ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LKVNFGTPEFLAPEVV--NYD 263
Query: 296 Y-GVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
+ D+WS G I LL+G G + E L+ I
Sbjct: 264 FVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNI 300
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 18/205 (8%)
Query: 122 DKIGQGTYSNVYKAKDMLTGKIVALKKV--RFDNLEPESVKFMAREILILRRLDHPNVIK 179
+K+G+G + VYK + VA+KK+ D E + +EI ++ + H N+++
Sbjct: 31 NKMGEGGFGVVYKG--YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 88
Query: 180 LEGLVTSRMSCSLYLVFHYMEHD-----LAGLAASPEVKFTEPQVKCYMHQ-LLSGLEHC 233
L G S L LV+ YM + L+ L +P + + ++C + Q +G+
Sbjct: 89 LLGF--SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW---HMRCKIAQGAANGINFL 143
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLG 292
H N +HRDIK +N+L+D+ KI+DFGLA + + M R+V T Y PE L G
Sbjct: 144 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG 203
Query: 293 ATDYGVGVDLWSAGCILAELLAGKP 317
+ D++S G +L E++ G P
Sbjct: 204 --EITPKSDIYSFGVVLLEIITGLP 226
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 21/206 (10%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKK-VRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
+G+G + K TG+++ +K+ +RFD E+ + +E+ ++R L+HPNV+K G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDE---ETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 183 LVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHR 241
++ L + Y++ L G+ S + ++ Q + + SG+ + H+ ++HR
Sbjct: 75 VLYK--DKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHR 132
Query: 242 DIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR-------------VVTLWYRPPE 288
D+ N L+ ++ + +ADFGLA P R V ++ PE
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192
Query: 289 LLLGATDYGVGVDLWSAGCILAELLA 314
++ G + Y VD++S G +L E++
Sbjct: 193 MINGRS-YDEKVDVFSFGIVLCEIIG 217
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 6/216 (2%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFD-NLEPESVKFMAREILILRRLD 173
+D +E + +G G S V+ A+D+ + VA+K +R D +P RE L+
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 174 HPNVIKL--EGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
HP ++ + G + Y+V Y++ E T + + L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHKHPMTSRVV-TLWYRPPEL 289
H NG++HRD+K +N+LI +K+ DFG+A + D + T+ V+ T Y PE
Sbjct: 131 FSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQ 190
Query: 290 LLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEV 325
G + D++S GC+L E+L G+P G + V
Sbjct: 191 ARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 100/203 (49%), Gaps = 8/203 (3%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRL-DH 174
F+ + IG+G+Y+ V + T +I A+K V+ + + + E + ++ E + + +H
Sbjct: 21 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 80
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++ L + L+ V Y+ + K E + Y ++ L + H
Sbjct: 81 PFLVGLHSCFQT--ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 138
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGA 293
G+++RD+K N+L+D +G +K+ D+G+ + TS T Y PE+L G
Sbjct: 139 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGE 196
Query: 294 TDYGVGVDLWSAGCILAELLAGK 316
DYG VD W+ G ++ E++AG+
Sbjct: 197 -DYGFSVDWWALGVLMFEMMAGR 218
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 131/315 (41%), Gaps = 50/315 (15%)
Query: 109 GWIPRRA-------DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKF 161
G +PR + D + + IG G+YS + T A+K + +P
Sbjct: 13 GLVPRGSHMNLVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDP----- 67
Query: 162 MAREI-LILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK 220
+ EI ++LR HPN+I L+ + +YLV M + F+E +
Sbjct: 68 -SEEIEILLRYGQHPNIITLKDVYDD--GKHVYLVTELMRGGELLDKILRQKFFSEREAS 124
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLL-IDDDG---VLKIADFGLASFFDPNHKHPMT 276
+H + +E+ H+ GV+HRD+K SN+L +D+ G L+I DFG A + MT
Sbjct: 125 FVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMT 184
Query: 277 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAG-KPIM--PGRTEVEQLHKIYK 333
T + PE +L Y G D+WS G +L +LAG P P T E L +I
Sbjct: 185 P-CYTANFVAPE-VLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGS 242
Query: 334 LCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTA 393
+ S W + ET KD L+ +L +DP +RLTA
Sbjct: 243 GKFTLSGGNWN------------------TVSETAKD-------LVSKMLHVDPHQRLTA 277
Query: 394 TVALNSEVIFQDRTL 408
L + Q L
Sbjct: 278 KQVLQHPWVTQKDKL 292
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 109/239 (45%), Gaps = 29/239 (12%)
Query: 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDN---LEPESVKFMAREILILRRLDHPNVI 178
D +GQG +NV++ + TG + A+K F+N L P V+ RE +L++L+H N++
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKV--FNNISFLRPVDVQM--REFEVLKKLNHKNIV 70
Query: 179 KLEGLVTSRMSCSLYLVFHYME-HDLAGLAASPEVKFTEPQVK--CYMHQLLSGLEHCHN 235
KL + + L+ + L + P + P+ + + ++ G+ H
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 236 NGVLHRDIKGSNLL--IDDDG--VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLL 291
NG++HR+IK N++ I +DG V K+ DFG A + + + T Y P++
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ--FVXLYGTEEYLHPDMYE 188
Query: 292 GAT-------DYGVGVDLWSAGCILAELLAG----KPIMPGRTEVEQLHKIYKLCGSPS 339
A YG VDLWS G G +P R E ++KI + G PS
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI--ITGKPS 245
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 101/208 (48%), Gaps = 8/208 (3%)
Query: 112 PRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILR 170
P F+ + IG+G+Y+ V + T +I A+K V+ + + + E + ++ E +
Sbjct: 5 PLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 64
Query: 171 RL-DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSG 229
+ +HP ++ L + L+ V Y+ + K E + Y ++
Sbjct: 65 QASNHPFLVGLHSCFQT--ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA 122
Query: 230 LEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPE 288
L + H G+++RD+K N+L+D +G +K+ D+G+ + TS T Y PE
Sbjct: 123 LNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPE 180
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGK 316
+L G DYG VD W+ G ++ E++AG+
Sbjct: 181 ILRGE-DYGFSVDWWALGVLMFEMMAGR 207
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 100/203 (49%), Gaps = 8/203 (3%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRL-DH 174
F+ + IG+G+Y+ V + T +I A+K V+ + + + E + ++ E + + +H
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 65
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
P ++ L + L+ V Y+ + K E + Y ++ L + H
Sbjct: 66 PFLVGLHSCFQTE--SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 123
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGA 293
G+++RD+K N+L+D +G +K+ D+G+ + TS T Y PE+L G
Sbjct: 124 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGE 181
Query: 294 TDYGVGVDLWSAGCILAELLAGK 316
DYG VD W+ G ++ E++AG+
Sbjct: 182 -DYGFSVDWWALGVLMFEMMAGR 203
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 6/216 (2%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFD-NLEPESVKFMAREILILRRLD 173
+D +E + +G G S V+ A+D+ + VA+K +R D +P RE L+
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 174 HPNVIKL--EGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
HP ++ + G + Y+V Y++ E T + + L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHKHPMTSRVV-TLWYRPPEL 289
H NG++HRD+K +N++I +K+ DFG+A + D + T+ V+ T Y PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 290 LLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEV 325
G + D++S GC+L E+L G+P G + V
Sbjct: 191 ARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 6/216 (2%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFD-NLEPESVKFMAREILILRRLD 173
+D +E + +G G S V+ A+D+ + VA+K +R D +P RE L+
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 174 HPNVIKL--EGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
HP ++ + G + Y+V Y++ E T + + L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHKHPMTSRVV-TLWYRPPEL 289
H NG++HRD+K +N++I +K+ DFG+A + D + T+ V+ T Y PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 290 LLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEV 325
G + D++S GC+L E+L G+P G + V
Sbjct: 191 ARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 6/216 (2%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFD-NLEPESVKFMAREILILRRLD 173
+D +E + +G G S V+ A+D+ + VA+K +R D +P RE L+
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 174 HPNVIKL--EGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
HP ++ + G + Y+V Y++ E T + + L
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHKHPMTSRVV-TLWYRPPEL 289
H NG++HRD+K +N++I +K+ DFG+A + D + T+ V+ T Y PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 290 LLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEV 325
G + D++S GC+L E+L G+P G + V
Sbjct: 191 ARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 119/287 (41%), Gaps = 39/287 (13%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEP-ESVKFMAR-EILILRRLD 173
D ++ +++G G + V++ + TG A K V + P ES K R EI + L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV----MTPHESDKETVRKEIQTMSVLR 212
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
HP ++ L + +++ +M +L A K +E + YM Q+ GL H
Sbjct: 213 HPTLVNLHDAFED--DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCH 270
Query: 233 CHNNGVLHRDIKGSNLLIDD--DGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELL 290
H N +H D+K N++ LK+ DFGL + DP +T+ T + PE+
Sbjct: 271 MHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTG--TAEFAAPEVA 328
Query: 291 LGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350
G G D+WS G + LL+G G + E L + K C W +
Sbjct: 329 EGKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV-KSCD------WNM----D 376
Query: 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
+ F I E KDF I LL DP R+T AL
Sbjct: 377 DSAFS-------GISEDGKDF-------IRKLLLADPNTRMTIHQAL 409
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 127/302 (42%), Gaps = 43/302 (14%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREI-LILRRLD 173
+D + + IG G+YS + T A+K + +P + EI ++LR
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDP------SEEIEILLRYGQ 79
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
HPN+I L+ + +YLV M + F+E + +H + +E+
Sbjct: 80 HPNIITLKDVYDD--GKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYL 137
Query: 234 HNNGVLHRDIKGSNLL-IDDDG---VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPEL 289
H+ GV+HRD+K SN+L +D+ G L+I DFG A + MT T + PE
Sbjct: 138 HSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP-CYTANFVAPE- 195
Query: 290 LLGATDYGVGVDLWSAGCILAELLAG-KPIM--PGRTEVEQLHKIYKLCGSPSEEYWKKS 346
+L Y G D+WS G +L +LAG P P T E L +I + S W
Sbjct: 196 VLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNW--- 252
Query: 347 KLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIFQDR 406
+ ET KD L+ +L +DP +RLTA L + Q
Sbjct: 253 ---------------NTVSETAKD-------LVSKMLHVDPHQRLTAKQVLQHPWVTQKD 290
Query: 407 TL 408
L
Sbjct: 291 KL 292
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 119/287 (41%), Gaps = 39/287 (13%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEP-ESVKFMAR-EILILRRLD 173
D ++ +++G G + V++ + TG A K V + P ES K R EI + L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV----MTPHESDKETVRKEIQTMSVLR 106
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
HP ++ L + +++ +M +L A K +E + YM Q+ GL H
Sbjct: 107 HPTLVNLHDAFED--DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCH 164
Query: 233 CHNNGVLHRDIKGSNLLIDD--DGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELL 290
H N +H D+K N++ LK+ DFGL + DP +T+ T + PE+
Sbjct: 165 MHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTG--TAEFAAPEVA 222
Query: 291 LGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPN 350
G G D+WS G + LL+G G + E L + K C W +
Sbjct: 223 EGKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV-KSCD------WNM----D 270
Query: 351 ATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
+ F I E KDF I LL DP R+T AL
Sbjct: 271 DSAFS-------GISEDGKDF-------IRKLLLADPNTRMTIHQAL 303
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 112/242 (46%), Gaps = 19/242 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE----SVKFMAREILILRR 171
D ++ +++G G ++ V K ++ TG A K ++ + S + + RE+ IL+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 172 LDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ HPNVI L + ++ L L +L A E TE + ++ Q+L+G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILEL-VAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGV----LKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ H+ + H D+K N+++ D V +KI DFGLA HK + ++ P
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDFGNEFKNIFGTPA 182
Query: 288 ELLLGATDY---GVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344
+ +Y G+ D+WS G I LL+G G T+ E L + + +EY+
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 345 KS 346
+
Sbjct: 243 NT 244
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 123/269 (45%), Gaps = 23/269 (8%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE----SVKFMAREILILRR 171
D ++ +++G G ++ V K ++ TG A K ++ + S + + RE+ IL+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 172 LDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ HPNVI L + ++ L L +L A E TE + ++ Q+L+G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILEL-VAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGV----LKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ H+ + H D+K N+++ D V +KI DFGLA HK + ++ P
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDFGNEFKNIFGTPE 182
Query: 288 ELLLGATDY---GVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344
+ +Y G+ D+WS G I LL+G G T+ E L + + +EY+
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 345 KSKLPNATLFKP---REPYKR-CIQETFK 369
+ + ++P KR IQ++ +
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 112/242 (46%), Gaps = 19/242 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE----SVKFMAREILILRR 171
D ++ +++G G ++ V K ++ TG A K ++ + S + + RE+ IL+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 172 LDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ HPNVI L + ++ L L +L A E TE + ++ Q+L+G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILEL-VAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGV----LKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ H+ + H D+K N+++ D V +KI DFGLA HK + ++ P
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDFGNEFKNIFGTPE 182
Query: 288 ELLLGATDY---GVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344
+ +Y G+ D+WS G I LL+G G T+ E L + + +EY+
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 345 KS 346
+
Sbjct: 243 NT 244
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 100/202 (49%), Gaps = 8/202 (3%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNL-EPESVKFMAREILILRRL-DHP 175
F+ + IG+G+Y+ V + T +I A++ V+ + + + E + ++ E + + +HP
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
++ L + L+ V Y+ + K E + Y ++ L + H
Sbjct: 114 FLVGLHSCFQTE--SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 171
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLGAT 294
G+++RD+K N+L+D +G +K+ D+G+ + TS T Y PE+L G
Sbjct: 172 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAPEILRGE- 228
Query: 295 DYGVGVDLWSAGCILAELLAGK 316
DYG VD W+ G ++ E++AG+
Sbjct: 229 DYGFSVDWWALGVLMFEMMAGR 250
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 112/242 (46%), Gaps = 19/242 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE----SVKFMAREILILRR 171
D ++ +++G G ++ V K ++ TG A K ++ + S + + RE+ IL+
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 172 LDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ HPNVI L + ++ L L +L A E TE + ++ Q+L+G+
Sbjct: 70 IQHPNVITLHEVYENKTDVILILEL-VAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 127
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGV----LKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ H+ + H D+K N+++ D V +KI DFGLA HK + ++ P
Sbjct: 128 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDFGNEFKNIFGTPE 181
Query: 288 ELLLGATDY---GVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344
+ +Y G+ D+WS G I LL+G G T+ E L + + +EY+
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 241
Query: 345 KS 346
+
Sbjct: 242 NT 243
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 112/242 (46%), Gaps = 19/242 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE----SVKFMAREILILRR 171
D ++ +++G G ++ V K ++ TG A K ++ + S + + RE+ IL+
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 172 LDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ HPNVI L + ++ L L +L A E TE + ++ Q+L+G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILEL-VAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGV----LKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ H+ + H D+K N+++ D V +KI DFGLA HK + ++ P
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDFGNEFKNIFGTPE 182
Query: 288 ELLLGATDY---GVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344
+ +Y G+ D+WS G I LL+G G T+ E L + + +EY+
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 345 KS 346
+
Sbjct: 243 NT 244
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 112/242 (46%), Gaps = 19/242 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE----SVKFMAREILILRR 171
D ++ +++G G ++ V K ++ TG A K ++ + S + + RE+ IL+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 172 LDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ HPNVI L + ++ L L +L A E TE + ++ Q+L+G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILEL-VAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGV----LKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ H+ + H D+K N+++ D V +KI DFGLA HK + ++ P
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDFGNEFKNIFGTPE 182
Query: 288 ELLLGATDY---GVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344
+ +Y G+ D+WS G I LL+G G T+ E L + + +EY+
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 345 KS 346
+
Sbjct: 243 NT 244
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 115/248 (46%), Gaps = 25/248 (10%)
Query: 108 NGW-IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEP--ESVKFMAR 164
+ W IPR +S + + ++G G + V+ G KV L+P SV+
Sbjct: 6 DAWEIPR--ESIKLVKRLGAGQFGEVW------MGYYNNSTKVAVKTLKPGTMSVQAFLE 57
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD--LAGLAASPEVKFTEPQVKCY 222
E +++ L H +++L +VT +Y++ YM L L + K P++ +
Sbjct: 58 EANLMKTLQHDKLVRLYAVVTREEP--IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDF 115
Query: 223 MHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN-HKHPMTSRVVT 281
Q+ G+ + +HRD++ +N+L+ + + KIADFGLA + N + ++
Sbjct: 116 SAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI 175
Query: 282 LWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVE------QLHKIYKL 334
W P + G + + D+WS G +L E++ GK PGRT + Q +++ ++
Sbjct: 176 KWTAPEAINFGC--FTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRV 233
Query: 335 CGSPSEEY 342
P E Y
Sbjct: 234 ENCPDELY 241
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 112/242 (46%), Gaps = 19/242 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE----SVKFMAREILILRR 171
D ++ +++G G ++ V K ++ TG A K ++ + S + + RE+ IL+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 172 LDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ HPNVI L + ++ L L +L A E TE + ++ Q+L+G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILEL-VAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGV----LKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ H+ + H D+K N+++ D V +KI DFGLA HK + ++ P
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDFGNEFKNIFGTPE 182
Query: 288 ELLLGATDY---GVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344
+ +Y G+ D+WS G I LL+G G T+ E L + + +EY+
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 345 KS 346
+
Sbjct: 243 NT 244
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 112/242 (46%), Gaps = 19/242 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE----SVKFMAREILILRR 171
D ++ +++G G ++ V K ++ TG A K ++ + S + + RE+ IL+
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 172 LDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ HPNVI L + ++ L L +L A E TE + ++ Q+L+G+
Sbjct: 70 IQHPNVITLHEVYENKTDVILILEL-VAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 127
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGV----LKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ H+ + H D+K N+++ D V +KI DFGLA HK + ++ P
Sbjct: 128 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDFGNEFKNIFGTPE 181
Query: 288 ELLLGATDY---GVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344
+ +Y G+ D+WS G I LL+G G T+ E L + + +EY+
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 241
Query: 345 KS 346
+
Sbjct: 242 NT 243
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 112/242 (46%), Gaps = 19/242 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE----SVKFMAREILILRR 171
D ++ +++G G ++ V K ++ TG A K ++ + S + + RE+ IL+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 172 LDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ HPNVI L + ++ L L +L A E TE + ++ Q+L+G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILEL-VAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGV----LKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ H+ + H D+K N+++ D V +KI DFGLA HK + ++ P
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDFGNEFKNIFGTPE 182
Query: 288 ELLLGATDY---GVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344
+ +Y G+ D+WS G I LL+G G T+ E L + + +EY+
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 345 KS 346
+
Sbjct: 243 NT 244
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 120/248 (48%), Gaps = 26/248 (10%)
Query: 108 NGW-IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREI 166
+ W +PR ++ + ++++G G V+ K VA+K ++ ++ P++ F+A E
Sbjct: 6 DAWEVPR--ETLKLVERLGAGQAGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EA 59
Query: 167 LILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPE-VKFTEPQVKCYMH 224
++++L H +++L +VT +Y++ YME+ L +P +K T ++
Sbjct: 60 NLMKQLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 225 QLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWY 284
Q+ G+ +HRD++ +N+L+ D KIADFGLA + + +
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKW 176
Query: 285 RPPELLLGATDYG---VGVDLWSAGCILAELLA-GKPIMPGRTE---VEQLHKIYKLC-- 335
PE A +YG + D+WS G +L E++ G+ PG T ++ L + Y++
Sbjct: 177 TAPE----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 232
Query: 336 -GSPSEEY 342
P E Y
Sbjct: 233 DNCPEELY 240
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 112/242 (46%), Gaps = 19/242 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE----SVKFMAREILILRR 171
D ++ +++G G ++ V K ++ TG A K ++ + S + + RE+ IL+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 172 LDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ HPNVI L + ++ L L +L A E TE + ++ Q+L+G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILEL-VAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGV----LKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ H+ + H D+K N+++ D V +KI DFGLA HK + ++ P
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDFGNEFKNIFGTPE 182
Query: 288 ELLLGATDY---GVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344
+ +Y G+ D+WS G I LL+G G T+ E L + + +EY+
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 345 KS 346
+
Sbjct: 243 NT 244
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 112/242 (46%), Gaps = 19/242 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE----SVKFMAREILILRR 171
D ++ +++G G ++ V K ++ TG A K ++ + S + + RE+ IL+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 172 LDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ HPNVI L + ++ L L +L A E TE + ++ Q+L+G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILEL-VAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGV----LKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ H+ + H D+K N+++ D V +KI DFGLA HK + ++ P
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDFGNEFKNIFGTPE 182
Query: 288 ELLLGATDY---GVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344
+ +Y G+ D+WS G I LL+G G T+ E L + + +EY+
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 345 KS 346
+
Sbjct: 243 NT 244
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 112/242 (46%), Gaps = 19/242 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE----SVKFMAREILILRR 171
D ++ +++G G ++ V K ++ TG A K ++ + S + + RE+ IL+
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 172 LDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ HPNVI L + ++ L L +L A E TE + ++ Q+L+G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILEL-VAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGV----LKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ H+ + H D+K N+++ D V +KI DFGLA HK + ++ P
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDFGNEFKNIFGTPE 182
Query: 288 ELLLGATDY---GVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344
+ +Y G+ D+WS G I LL+G G T+ E L + + +EY+
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 345 KS 346
+
Sbjct: 243 NT 244
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 112/242 (46%), Gaps = 19/242 (7%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE----SVKFMAREILILRR 171
D ++ +++G G ++ V K ++ TG A K ++ + S + + RE+ IL+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 172 LDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ HPNVI L + ++ L L +L A E TE + ++ Q+L+G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILEL-VAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGV----LKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ H+ + H D+K N+++ D V +KI DFGLA HK + ++ P
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDFGNEFKNIFGTPE 182
Query: 288 ELLLGATDY---GVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWK 344
+ +Y G+ D+WS G I LL+G G T+ E L + + +EY+
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 345 KS 346
+
Sbjct: 243 NT 244
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 6/212 (2%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFD-NLEPESVKFMAREILILRRLD 173
+D +E + +G G S V+ A+D+ + VA+K +R D +P RE L+
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 174 HPNVIKL--EGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
HP ++ + G + Y+V Y++ E T + + L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHKHPMTSRVV-TLWYRPPEL 289
H NG++HRD+K +N++I +K+ DFG+A + D + T+ V+ T Y PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 290 LLGATDYGVGVDLWSAGCILAELLAGKPIMPG 321
G + D++S GC+L E+L G+P G
Sbjct: 191 ARGDS-VDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 6/216 (2%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFD-NLEPESVKFMAREILILRRLD 173
+D +E + +G G S V+ A+D+ + VA+K +R D +P RE L+
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 174 HPNVIKL--EGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
HP ++ + G + Y+V Y++ E T + + L
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 147
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHKHPMTSRVV-TLWYRPPEL 289
H NG++HRD+K +N++I +K+ DFG+A + D + T+ V+ T Y PE
Sbjct: 148 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 207
Query: 290 LLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEV 325
G + D++S GC+L E+L G+P G + V
Sbjct: 208 ARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 242
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAR 164
++++ W R D K K+G G Y VY VA+K ++ D +E E +
Sbjct: 22 QSMDKWEMERTDITMK-HKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE---FLK 77
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYM 223
E +++ + HPN+++L G+ T + Y+V YM + +L + V YM
Sbjct: 78 EAAVMKEIKHPNLVQLLGVCT--LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYM 135
Query: 224 H-QLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTL 282
Q+ S +E+ +HRD+ N L+ ++ V+K+ADFGL+ + +
Sbjct: 136 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPI 195
Query: 283 WYRPPELLLGATDYGVGVDLWSAGCILAEL 312
+ PE L T + + D+W+ G +L E+
Sbjct: 196 KWTAPESLAYNT-FSIKSDVWAFGVLLWEI 224
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 17/208 (8%)
Query: 118 FEKIDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEPES----VKFMAREILIL 169
++I +G+G + V Y + TG+ VA+K +L+PES + + +EI IL
Sbjct: 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVK-----SLKPESGGNHIADLKKEIEIL 77
Query: 170 RRLDHPNVIKLEGLVTSRMSCSLYLVFHYM-EHDLAGLAASPEVKFTEPQVKCYMHQLLS 228
R L H N++K +G+ T + L+ ++ L + K Q Y Q+
Sbjct: 78 RNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICK 137
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMT--SRVVTLWYRP 286
G+++ + +HRD+ N+L++ + +KI DFGL + + + R +++
Sbjct: 138 GMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA 197
Query: 287 PELLLGATDYGVGVDLWSAGCILAELLA 314
PE L+ + Y + D+WS G L ELL
Sbjct: 198 PECLMQSKFY-IASDVWSFGVTLHELLT 224
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 101/220 (45%), Gaps = 15/220 (6%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
+E +++G G + V + TG+ VA+K+ R L P++ + EI I+++L+HPNV
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCR-QELSPKNRERWCLEIQIMKKLNHPNV 75
Query: 178 IKL----EGLVTSRMSCSLYLVFHYMEH-DLAGLAASPE--VKFTEPQVKCYMHQLLSGL 230
+ +GL + L Y E DL E E ++ + + S L
Sbjct: 76 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 135
Query: 231 EHCHNNGVLHRDIKGSNLLID---DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ H N ++HRD+K N+++ + KI D G A D T V TL Y P
Sbjct: 136 RYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD--QGELCTEFVGTLQYLAP 193
Query: 288 ELLLGATDYGVGVDLWSAGCILAELLAG-KPIMPGRTEVE 326
E LL Y V VD WS G + E + G +P +P V+
Sbjct: 194 E-LLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ 232
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 101/220 (45%), Gaps = 15/220 (6%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
+E +++G G + V + TG+ VA+K+ R L P++ + EI I+++L+HPNV
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCR-QELSPKNRERWCLEIQIMKKLNHPNV 74
Query: 178 IKL----EGLVTSRMSCSLYLVFHYMEH-DLAGLAASPE--VKFTEPQVKCYMHQLLSGL 230
+ +GL + L Y E DL E E ++ + + S L
Sbjct: 75 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 134
Query: 231 EHCHNNGVLHRDIKGSNLLID---DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ H N ++HRD+K N+++ + KI D G A D T V TL Y P
Sbjct: 135 RYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD--QGELCTEFVGTLQYLAP 192
Query: 288 ELLLGATDYGVGVDLWSAGCILAELLAG-KPIMPGRTEVE 326
E LL Y V VD WS G + E + G +P +P V+
Sbjct: 193 E-LLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ 231
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
++G+G++ V++ KD TG A+KKVR + F E++ L P ++ L G
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLE-------VFRVEELVACAGLSSPRIVPLYG 117
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
V R + + +E G E + Y+ Q L GLE+ H +LH D
Sbjct: 118 AV--REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGD 175
Query: 243 IKGSNLLIDDDGV-LKIADFGLASFFDPN--HKHPMTSRVV--TLWYRPPELLLGATDYG 297
+K N+L+ DG + DFG A P+ K +T + T + PE+++G
Sbjct: 176 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCD 234
Query: 298 VGVDLWSAGCILAELLAG 315
VD+WS+ C++ +L G
Sbjct: 235 AKVDIWSSCCMMLHMLNG 252
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
++G+G++ V++ KD TG A+KKVR + F E++ L P ++ L G
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLE-------VFRVEELVACAGLSSPRIVPLYG 133
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
V R + + +E G E + Y+ Q L GLE+ H +LH D
Sbjct: 134 AV--REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGD 191
Query: 243 IKGSNLLIDDDGV-LKIADFGLASFFDPN--HKHPMTSRVV--TLWYRPPELLLGATDYG 297
+K N+L+ DG + DFG A P+ K +T + T + PE+++G
Sbjct: 192 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCD 250
Query: 298 VGVDLWSAGCILAELLAG 315
VD+WS+ C++ +L G
Sbjct: 251 AKVDIWSSCCMMLHMLNG 268
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 9/209 (4%)
Query: 106 ALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMARE 165
+L+ W R D K K+G G Y VY+ VA+K ++ D +E E +E
Sbjct: 2 SLDKWEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKE 57
Query: 166 ILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMH 224
+++ + HPN+++L G+ T Y++ +M + +L + V YM
Sbjct: 58 AAVMKEIKHPNLVQLLGVCTRE--PPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMA 115
Query: 225 -QLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLW 283
Q+ S +E+ +HRD+ N L+ ++ ++K+ADFGL+ + +
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 175
Query: 284 YRPPELLLGATDYGVGVDLWSAGCILAEL 312
+ PE L + + D+W+ G +L E+
Sbjct: 176 WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 16/231 (6%)
Query: 108 NGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREIL 167
+ W R D K K+G G Y VY+ VA+K ++ D +E E +E
Sbjct: 7 DKWEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAA 62
Query: 168 ILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMH-Q 225
+++ + HPN+++L G+ T Y++ +M + +L + V YM Q
Sbjct: 63 VMKEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 120
Query: 226 LLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN-HKHPMTSRVVTLWY 284
+ S +E+ +HRD+ N L+ ++ ++K+ADFGL+ + + P ++ W
Sbjct: 121 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWT 180
Query: 285 RPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKL 334
P L + + D+W+ G +L E+ G PG L ++Y+L
Sbjct: 181 APES--LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYEL 225
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 17/208 (8%)
Query: 118 FEKIDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEPES----VKFMAREILIL 169
++I +G+G + V Y + TG+ VA+K +L+PES + + +EI IL
Sbjct: 11 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVK-----SLKPESGGNHIADLKKEIEIL 65
Query: 170 RRLDHPNVIKLEGLVTSRMSCSLYLVFHYM-EHDLAGLAASPEVKFTEPQVKCYMHQLLS 228
R L H N++K +G+ T + L+ ++ L + K Q Y Q+
Sbjct: 66 RNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICK 125
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMT--SRVVTLWYRP 286
G+++ + +HRD+ N+L++ + +KI DFGL + + + R +++
Sbjct: 126 GMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA 185
Query: 287 PELLLGATDYGVGVDLWSAGCILAELLA 314
PE L+ + Y + D+WS G L ELL
Sbjct: 186 PECLMQSKFY-IASDVWSFGVTLHELLT 212
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 116/264 (43%), Gaps = 38/264 (14%)
Query: 105 EALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPES--VKFM 162
E L +P+ ++ F+ DKIG+GT+S+VY A L ++ +K+ +L P S ++
Sbjct: 10 EKLYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQL--QVGPEEKIALKHLIPTSHPIRIA 67
Query: 163 AREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCY 222
A + NV+ ++ R + + + Y+EH+ + L + F E V+ Y
Sbjct: 68 AELQCLTVAGGQDNVMGVK--YCFRKNDHVVIAMPYLEHE-SFLDILNSLSFQE--VREY 122
Query: 223 MHQLLSGLEHCHNNGVLHRDIKGSNLLIDDD-GVLKIADFGLAS-----------FFDP- 269
M L L+ H G++HRD+K SN L + + DFGLA F
Sbjct: 123 MLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSE 182
Query: 270 ---------------NHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+ + + R T +R PE+L + +D+WSAG I LL+
Sbjct: 183 AQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLS 242
Query: 315 GK-PIMPGRTEVEQLHKIYKLCGS 337
G+ P ++ L +I + GS
Sbjct: 243 GRYPFYKASDDLTALAQIMTIRGS 266
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 16/231 (6%)
Query: 108 NGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREIL 167
+ W R D K K+G G Y VY+ VA+K ++ D +E E +E
Sbjct: 8 DKWEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAA 63
Query: 168 ILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMH-Q 225
+++ + HPN+++L G+ T Y++ +M + +L + V YM Q
Sbjct: 64 VMKEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 121
Query: 226 LLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN-HKHPMTSRVVTLWY 284
+ S +E+ +HRD+ N L+ ++ ++K+ADFGL+ + + P ++ W
Sbjct: 122 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWT 181
Query: 285 RPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKL 334
P L + + D+W+ G +L E+ G PG L ++Y+L
Sbjct: 182 APES--LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYEL 226
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 13/225 (5%)
Query: 96 PPWLTAVCGEALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDN-- 153
PP AV E L + + + +G G + V+ A D K V +K ++ +
Sbjct: 6 PP--KAVELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVL 63
Query: 154 ----LEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDL-AGLAA 208
+E + + EI IL R++H N+IK+ + ++ L + H DL A +
Sbjct: 64 EDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDR 123
Query: 209 SPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD 268
P + EP QL+S + + ++HRDIK N++I +D +K+ DFG A++ +
Sbjct: 124 HP--RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE 181
Query: 269 PNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELL 313
+ T+ Y PE+L+G G +++WS G L L+
Sbjct: 182 --RGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 114/239 (47%), Gaps = 16/239 (6%)
Query: 108 NGW-IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREI 166
+ W IPR + EK K+G G + V+ A K VA+K ++ ++ E+ F+A E
Sbjct: 8 DAWEIPRESLKLEK--KLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEA--FLA-EA 61
Query: 167 LILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD--LAGLAASPEVKFTEPQVKCYMH 224
+++ L H ++KL +VT +Y++ +M L L + K P++ +
Sbjct: 62 NVMKTLQHDKLVKLHAVVTKE---PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA 118
Query: 225 QLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN-HKHPMTSRVVTLW 283
Q+ G+ +HRD++ +N+L+ V KIADFGLA + N + ++ W
Sbjct: 119 QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW 178
Query: 284 YRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKLCGSPSEE 341
P + G+ + + D+WS G +L E++ G+ PG + E + + + P E
Sbjct: 179 TAPEAINFGS--FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPE 235
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 22/204 (10%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
+IG G++ VYK K G VA+K + P+ ++ E+ +LR+ H N++ G
Sbjct: 15 RIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 183 LVTS------RMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
T+ C ++H++ H + E KF ++ Q G+++ H
Sbjct: 72 YSTAPQLAIVTQWCEGSSLYHHL-HII-------ETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 237 GVLHRDIKGSNLLIDDDGVLKIADFGLA---SFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
++HRD+K +N+ + +D +KI DFGLA S + +H+ S + LW P + +
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI-LWMAPEVIRMQD 182
Query: 294 TD-YGVGVDLWSAGCILAELLAGK 316
+ Y D+++ G +L EL+ G+
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 101/200 (50%), Gaps = 15/200 (7%)
Query: 124 IGQGTYSNVYKAKDML---TGKI---VALKKVRFDNLEPESVKFMAREILILRRLDHPNV 177
IG G + VYK ML +GK VA+K ++ E + V F+ E I+ + H N+
Sbjct: 52 IGAGEFGEVYKG--MLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLG-EAGIMGQFSHHNI 108
Query: 178 IKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
I+LEG+++ + ++ YME+ L + +F+ Q+ + + +G+++ N
Sbjct: 109 IRLEGVISKYKP--MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM 166
Query: 237 GVLHRDIKGSNLLIDDDGVLKIADFGLASFF--DPNHKHPMTSRVVTLWYRPPELLLGAT 294
+HRD+ N+L++ + V K++DFGL+ DP + + + + + PE +
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE-AISYR 225
Query: 295 DYGVGVDLWSAGCILAELLA 314
+ D+WS G ++ E++
Sbjct: 226 KFTSASDVWSFGIVMWEVMT 245
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 111/229 (48%), Gaps = 16/229 (6%)
Query: 108 NGW-IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREI 166
+ W IPR + EK K+G G + V+ A K VA+K ++ ++ E+ F+A E
Sbjct: 181 DAWEIPRESLKLEK--KLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEA--FLA-EA 234
Query: 167 LILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD--LAGLAASPEVKFTEPQVKCYMH 224
+++ L H ++KL +VT +Y++ +M L L + K P++ +
Sbjct: 235 NVMKTLQHDKLVKLHAVVTKE---PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA 291
Query: 225 QLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN-HKHPMTSRVVTLW 283
Q+ G+ +HRD++ +N+L+ V KIADFGLA + N + ++ W
Sbjct: 292 QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW 351
Query: 284 YRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKI 331
P + G+ + + D+WS G +L E++ G+ PG + E + +
Sbjct: 352 TAPEAINFGS--FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 398
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
++G+G++ V++ KD TG A+KKVR + F E++ L P ++ L G
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKVRLE-------VFRVEELVACAGLSSPRIVPLYG 131
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
V R + + +E G E + Y+ Q L GLE+ H +LH D
Sbjct: 132 AV--REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGD 189
Query: 243 IKGSNLLIDDDGV-LKIADFGLASFFDPN--HKHPMTSRVV--TLWYRPPELLLGATDYG 297
+K N+L+ DG + DFG A P+ K +T + T + PE+++G
Sbjct: 190 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCD 248
Query: 298 VGVDLWSAGCILAELLAG 315
VD+WS+ C++ +L G
Sbjct: 249 AKVDIWSSCCMMLHMLNG 266
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
+IG G++ VYK K G VA+K + P+ ++ E+ +LR+ H N++ G
Sbjct: 43 RIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 183 LVTSRMSCSLYLVFHYME-HDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHR 241
T L +V + E L E KF ++ Q G+++ H ++HR
Sbjct: 100 YSTK---PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 156
Query: 242 DIKGSNLLIDDDGVLKIADFGLA---SFFDPNHKHPMTSRVVTLWYRPPELLLGATD-YG 297
D+K +N+ + +D +KI DFGLA S + +H+ S + LW P + + + Y
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI-LWMAPEVIRMQDKNPYS 215
Query: 298 VGVDLWSAGCILAELLAGK 316
D+++ G +L EL+ G+
Sbjct: 216 FQSDVYAFGIVLYELMTGQ 234
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
+IG G++ VYK K G VA+K + P+ ++ E+ +LR+ H N++ G
Sbjct: 43 RIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 183 LVTSRMSCSLYLVFHYME-HDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHR 241
T L +V + E L E KF ++ Q G+++ H ++HR
Sbjct: 100 YSTK---PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 156
Query: 242 DIKGSNLLIDDDGVLKIADFGLA---SFFDPNHKHPMTSRVVTLWYRPPELLLGATD-YG 297
D+K +N+ + +D +KI DFGLA S + +H+ S + LW P + + + Y
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI-LWMAPEVIRMQDKNPYS 215
Query: 298 VGVDLWSAGCILAELLAGK 316
D+++ G +L EL+ G+
Sbjct: 216 FQSDVYAFGIVLYELMTGQ 234
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
+IG G++ VYK K G VA+K + P+ ++ E+ +LR+ H N++ G
Sbjct: 35 RIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 183 LVTSRMSCSLYLVFHYME-HDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHR 241
T L +V + E L E KF ++ Q G+++ H ++HR
Sbjct: 92 YSTK---PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 148
Query: 242 DIKGSNLLIDDDGVLKIADFGLA---SFFDPNHKHPMTSRVVTLWYRPPELLLGATD-YG 297
D+K +N+ + +D +KI DFGLA S + +H+ S + LW P + + + Y
Sbjct: 149 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI-LWMAPEVIRMQDKNPYS 207
Query: 298 VGVDLWSAGCILAELLAGK 316
D+++ G +L EL+ G+
Sbjct: 208 FQSDVYAFGIVLYELMTGQ 226
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 22/204 (10%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
+IG G++ VYK K G VA+K + P+ ++ E+ +LR+ H N++ G
Sbjct: 20 RIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 183 LVTS------RMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
T C ++H++ H + E KF ++ Q G+++ H
Sbjct: 77 YSTKPQLAIVTQWCEGSSLYHHL-HII-------ETKFEMIKLIDIARQTAQGMDYLHAK 128
Query: 237 GVLHRDIKGSNLLIDDDGVLKIADFGLA---SFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
++HRD+K +N+ + +D +KI DFGLA S + +H+ S + LW P + +
Sbjct: 129 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI-LWMAPEVIRMQD 187
Query: 294 TD-YGVGVDLWSAGCILAELLAGK 316
+ Y D+++ G +L EL+ G+
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 29/233 (12%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
+IG G++ VYK K G VA+K ++ + PE + E+ +LR+ H N++ G
Sbjct: 43 RIGSGSFGTVYKGK--WHGD-VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 183 LVTSRMSCSLYLVFHYME-HDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHR 241
+T +L +V + E L E KF Q+ Q G+++ H ++HR
Sbjct: 100 YMTKD---NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHR 156
Query: 242 DIKGSNLLIDDDGVLKIADFGLASF-----FDPNHKHPMTSRVVTLWYRPPELLLGATD- 295
D+K +N+ + + +KI DFGLA+ + P S LW P + + +
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGS---VLWMAPEVIRMQDNNP 213
Query: 296 YGVGVDLWSAGCILAELLAGK------------PIMPGRTEVE-QLHKIYKLC 335
+ D++S G +L EL+ G+ M GR L K+YK C
Sbjct: 214 FSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNC 266
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
+IG G++ VYK K G VA+K + P+ ++ E+ +LR+ H N++ G
Sbjct: 42 RIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 183 LVTSRMSCSLYLVFHYME-HDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHR 241
T L +V + E L E KF ++ Q G+++ H ++HR
Sbjct: 99 YSTK---PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 155
Query: 242 DIKGSNLLIDDDGVLKIADFGLA---SFFDPNHKHPMTSRVVTLWYRPPELLLGATD-YG 297
D+K +N+ + +D +KI DFGLA S + +H+ S + LW P + + + Y
Sbjct: 156 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI-LWMAPEVIRMQDKNPYS 214
Query: 298 VGVDLWSAGCILAELLAGK 316
D+++ G +L EL+ G+
Sbjct: 215 FQSDVYAFGIVLYELMTGQ 233
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 121 IDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
I ++G+G + +V Y TG +VA+K+++ P+ + REI IL+ L
Sbjct: 15 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--PDQQRDFQREIQILKALHSDF 72
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
++K G+ SL LV Y+ L + ++ Y Q+ G+E+ +
Sbjct: 73 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 132
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASF--FDPNH---KHPMTSRVVTLWYRPPELL 290
+HRD+ N+L++ + +KIADFGLA D ++ + P S + WY P
Sbjct: 133 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI--FWYAPES-- 188
Query: 291 LGATDYGVGVDLWSAGCILAELL 313
L + D+WS G +L EL
Sbjct: 189 LSDNIFSRQSDVWSFGVVLYELF 211
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
+IG G++ VYK K G VA+K + P+ ++ E+ +LR+ H N++ G
Sbjct: 17 RIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 183 LVTSRMSCSLYLVFHYME-HDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHR 241
T L +V + E L E KF ++ Q G+++ H ++HR
Sbjct: 74 YSTK---PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 130
Query: 242 DIKGSNLLIDDDGVLKIADFGLA---SFFDPNHKHPMTSRVVTLWYRPPELLLGATD-YG 297
D+K +N+ + +D +KI DFGLA S + +H+ S + LW P + + + Y
Sbjct: 131 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI-LWMAPEVIRMQDKNPYS 189
Query: 298 VGVDLWSAGCILAELLAGK 316
D+++ G +L EL+ G+
Sbjct: 190 FQSDVYAFGIVLYELMTGQ 208
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
+IG G++ VYK K G VA+K + P+ ++ E+ +LR+ H N++ G
Sbjct: 15 RIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 183 LVTSRMSCSLYLVFHYME-HDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHR 241
T L +V + E L E KF ++ Q G+++ H ++HR
Sbjct: 72 YSTK---PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 128
Query: 242 DIKGSNLLIDDDGVLKIADFGLA---SFFDPNHKHPMTSRVVTLWYRPPELLLGATD-YG 297
D+K +N+ + +D +KI DFGLA S + +H+ S + LW P + + + Y
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI-LWMAPEVIRMQDKNPYS 187
Query: 298 VGVDLWSAGCILAELLAGK 316
D+++ G +L EL+ G+
Sbjct: 188 FQSDVYAFGIVLYELMTGQ 206
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 113/244 (46%), Gaps = 24/244 (9%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEP--ESVKFMAREILI 168
IPR +S + + K+G G + V+ G KV L+P SV+ E +
Sbjct: 9 IPR--ESIKLVKKLGAGQFGEVW------MGYYNNSTKVAVKTLKPGTMSVQAFLEEANL 60
Query: 169 LRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD--LAGLAASPEVKFTEPQVKCYMHQL 226
++ L H +++L +VT +Y++ +M L L + K P++ + Q+
Sbjct: 61 MKTLQHDKLVRLYAVVTKEEP--IYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI 118
Query: 227 LSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN-HKHPMTSRVVTLWYR 285
G+ + +HRD++ +N+L+ + + KIADFGLA + N + ++ W
Sbjct: 119 AEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTA 178
Query: 286 PPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVE------QLHKIYKLCGSP 338
P + G + + ++WS G +L E++ GK PGRT + Q +++ ++ P
Sbjct: 179 PEAINFGC--FTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCP 236
Query: 339 SEEY 342
E Y
Sbjct: 237 DELY 240
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
+IG G++ VYK K G VA+K + P+ ++ E+ +LR+ H N++ G
Sbjct: 15 RIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 183 LVTSRMSCSLYLVFHYME-HDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHR 241
T L +V + E L E KF ++ Q G+++ H ++HR
Sbjct: 72 YSTK---PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 128
Query: 242 DIKGSNLLIDDDGVLKIADFGLA---SFFDPNHKHPMTSRVVTLWYRPPELLLGATD-YG 297
D+K +N+ + +D +KI DFGLA S + +H+ S + LW P + + + Y
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI-LWMAPEVIRMQDKNPYS 187
Query: 298 VGVDLWSAGCILAELLAGK 316
D+++ G +L EL+ G+
Sbjct: 188 FQSDVYAFGIVLYELMTGQ 206
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 28/209 (13%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE--PESVKFMAREILILRRLDHPNVIKLE 181
IG G + VY+A G VA+K R D E ++++ + +E + L HPN+I L
Sbjct: 15 IGIGGFGKVYRA--FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 182 GLVTSRMSCSLYLVFHY---MEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGV 238
G+ + L + F + L+G P++ + Q+ G+ + H+ +
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVN------WAVQIARGMNYLHDEAI 126
Query: 239 ---LHRDIKGSNLLIDD--------DGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+HRD+K SN+LI + +LKI DFGLA + K M++ W P
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK--MSAAGAYAWMAPE 184
Query: 288 ELLLGATDYGVGVDLWSAGCILAELLAGK 316
++ A+ + G D+WS G +L ELL G+
Sbjct: 185 --VIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 123 KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEG 182
+IG G++ VYK K G VA+K + P+ ++ E+ +LR+ H N++ G
Sbjct: 20 RIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 183 LVTSRMSCSLYLVFHYME-HDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHR 241
T L +V + E L E KF ++ Q G+++ H ++HR
Sbjct: 77 YSTK---PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 133
Query: 242 DIKGSNLLIDDDGVLKIADFGLA---SFFDPNHKHPMTSRVVTLWYRPPELLLGATD-YG 297
D+K +N+ + +D +KI DFGLA S + +H+ S + LW P + + + Y
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI-LWMAPEVIRMQDKNPYS 192
Query: 298 VGVDLWSAGCILAELLAGK 316
D+++ G +L EL+ G+
Sbjct: 193 FQSDVYAFGIVLYELMTGQ 211
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 121 IDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
I ++G+G + +V Y TG +VA+K+++ P+ + REI IL+ L
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--PDQQRDFQREIQILKALHSDF 85
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
++K G+ SL LV Y+ L + ++ Y Q+ G+E+ +
Sbjct: 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 145
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASF--FDPNH---KHPMTSRVVTLWYRPPELL 290
+HRD+ N+L++ + +KIADFGLA D ++ + P S + WY P
Sbjct: 146 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI--FWYAPES-- 201
Query: 291 LGATDYGVGVDLWSAGCILAELL 313
L + D+WS G +L EL
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELF 224
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 121 IDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
I ++G+G + +V Y TG +VA+K+++ P+ + REI IL+ L
Sbjct: 16 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--PDQQRDFQREIQILKALHSDF 73
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
++K G+ SL LV Y+ L + ++ Y Q+ G+E+ +
Sbjct: 74 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 133
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASF--FDPNH---KHPMTSRVVTLWYRPPELL 290
+HRD+ N+L++ + +KIADFGLA D ++ + P S + WY P
Sbjct: 134 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI--FWYAPES-- 189
Query: 291 LGATDYGVGVDLWSAGCILAELL 313
L + D+WS G +L EL
Sbjct: 190 LSDNIFSRQSDVWSFGVVLYELF 212
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 98/234 (41%), Gaps = 36/234 (15%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKI-----VALKKVRFDNLEPESVKFMARE 165
PR F K+ +G G + V A K VA+K ++ E M+
Sbjct: 42 FPRENLEFGKV--LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSEL 99
Query: 166 ILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVK---- 220
++ + H N++ L G T +S +YL+F Y + DL S KF+E +++
Sbjct: 100 KMMTQLGSHENIVNLLGACT--LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQ 157
Query: 221 ------------------CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFG 262
C+ +Q+ G+E +HRD+ N+L+ V+KI DFG
Sbjct: 158 KRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFG 217
Query: 263 LAS--FFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
LA D N+ +R+ W P L G Y + D+WS G +L E+ +
Sbjct: 218 LARDIMSDSNYVVRGNARLPVKWMAPESLFEGI--YTIKSDVWSYGILLWEIFS 269
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 113/244 (46%), Gaps = 23/244 (9%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE----SVKFMAREILILRR 171
D ++ +++G G ++ V K ++ TG A K ++ + S + + RE+ IL+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 172 LDHPNVIKLEGLVTSRMSCSLY--LVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSG 229
+ HPNVI L + ++ L LV +L A E TE + ++ Q+L+G
Sbjct: 71 IQHPNVITLHEVYENKTDVILIGELV---AGGELFDFLAEKE-SLTEEEATEFLKQILNG 126
Query: 230 LEHCHNNGVLHRDIKGSNLLIDDDGV----LKIADFGLASFFDPNHKHPMTSRVVTLWYR 285
+ + H+ + H D+K N+++ D V +KI DFGLA HK + ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDFGNEFKNIFGT 180
Query: 286 PPELLLGATDY---GVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEY 342
P + +Y G+ D+WS G I LL+G G T+ E L + + +EY
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 343 WKKS 346
+ +
Sbjct: 241 FSNT 244
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 9/209 (4%)
Query: 106 ALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMARE 165
+L+ W R D K K+G G Y VY+ VA+K ++ D +E E +E
Sbjct: 2 SLDKWEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKE 57
Query: 166 ILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMH 224
+++ + HPN+++L G+ T Y++ +M + +L + V YM
Sbjct: 58 AAVMKEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA 115
Query: 225 -QLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLW 283
Q+ S +E+ +HRD+ N L+ ++ ++K+ADFGL+ + +
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIK 175
Query: 284 YRPPELLLGATDYGVGVDLWSAGCILAEL 312
+ PE L + + D+W+ G +L E+
Sbjct: 176 WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 14/230 (6%)
Query: 108 NGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREIL 167
+ W R D K K+G G Y VY+ VA+K ++ D +E E +E
Sbjct: 7 DKWEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAA 62
Query: 168 ILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMH-Q 225
+++ + HPN+++L G+ T Y++ +M + +L + V YM Q
Sbjct: 63 VMKEIKHPNLVQLLGVCTRE--PPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 120
Query: 226 LLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYR 285
+ S +E+ +HRD+ N L+ ++ ++K+ADFGL+ + + +
Sbjct: 121 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT 180
Query: 286 PPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKL 334
PE L + + D+W+ G +L E+ G PG L ++Y+L
Sbjct: 181 APE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYEL 225
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 13/201 (6%)
Query: 124 IGQGTYSNVY---KAKDMLTGKIVALKKVRFDNLEPESVKFMAR-EILILRRLD----HP 175
+G+G + V+ + D L I + + R P S E+ +L ++ HP
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
VI+L ++ L L DL + E +C+ Q+++ ++HCH+
Sbjct: 99 GVIRLLDWFETQEGFMLVLERPLPAQDLFDYITE-KGPLGEGPSRCFFGQVVAAIQHCHS 157
Query: 236 NGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
GV+HRDIK N+LID G K+ DFG + H P T T Y PPE +
Sbjct: 158 RGVVHRDIKDENILIDLRRGCAKLIDFGSGALL---HDEPYTDFDGTRVYSPPEWISRHQ 214
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+ + +WS G +L +++ G
Sbjct: 215 YHALPATVWSLGILLYDMVCG 235
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 11/221 (4%)
Query: 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD 173
+ D FE+I ++G G V K + +G I+A K + + ++P + RE+ +L +
Sbjct: 14 KDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLE-IKPAIRNQIIRELQVLHECN 72
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
P ++ G S S+ + +M+ + E + +L GL +
Sbjct: 73 SPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYL 130
Query: 234 -HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
+ ++HRD+K SN+L++ G +K+ DFG++ + + S V T Y PE L G
Sbjct: 131 REKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRSYMAPERLQG 187
Query: 293 ATDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIY 332
T Y V D+WS G L EL G+ PI P + ++L I+
Sbjct: 188 -THYSVQSDIWSMGLSLVELAVGRYPIPP--PDAKELEAIF 225
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 9/209 (4%)
Query: 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD 173
+ D FEKI ++G G V+K +G ++A K + + ++P + RE+ +L +
Sbjct: 66 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECN 124
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
P ++ G S S+ + +M+ + E + ++ GL +
Sbjct: 125 SPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 182
Query: 234 -HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
+ ++HRD+K SN+L++ G +K+ DFG++ + + S V T Y PE L G
Sbjct: 183 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQG 239
Query: 293 ATDYGVGVDLWSAGCILAELLAGK-PIMP 320
T Y V D+WS G L E+ G+ PI P
Sbjct: 240 -THYSVQSDIWSMGLSLVEMAVGRYPIPP 267
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 122/291 (41%), Gaps = 43/291 (14%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREI-LILRRLD 173
D +E + IG G+YS + T A+K + +P EI ++LR
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDP------TEEIEILLRYGQ 74
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
HPN+I L+ + +Y+V M+ + F+E + + + +E+
Sbjct: 75 HPNIITLKDVYDD--GKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYL 132
Query: 234 HNNGVLHRDIKGSNLL-IDDDG---VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPEL 289
H GV+HRD+K SN+L +D+ G ++I DFG A + MT T + PE
Sbjct: 133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP-CYTANFVAPE- 190
Query: 290 LLGATDYGVGVDLWSAGCILAELLAG-KPIM--PGRTEVEQLHKIYKLCGSPSEEYWKKS 346
+L Y D+WS G +L +L G P P T E L +I S S YW
Sbjct: 191 VLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNS- 249
Query: 347 KLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
+ +T KD L+ +L +DP +RLTA + L
Sbjct: 250 -----------------VSDTAKD-------LVSKMLHVDPHQRLTAALVL 276
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 111/239 (46%), Gaps = 13/239 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALK--KVRFDNLEPESV--KFMAREILILRR 171
D ++ +++G G ++ V K ++ TG A K K R V + + RE+ ILR+
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQ 71
Query: 172 LDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ HPN+I L + +R L L +L A E +E + ++ Q+L G+
Sbjct: 72 VLHPNIITLHDVYENRTDVVLILEL-VSGGELFDFLAQKE-SLSEEEATSFIKQILDGVN 129
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGV----LKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ H + H D+K N+++ D + +K+ DFGLA + + + T + P
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTPEFVAP 187
Query: 288 ELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS 346
E ++ G+ D+WS G I LL+G G T+ E L I + EE++ ++
Sbjct: 188 E-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT 245
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 14/230 (6%)
Query: 108 NGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREIL 167
+ W R D K K+G G Y VY+ VA+K ++ D +E E +E
Sbjct: 6 DKWEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAA 61
Query: 168 ILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMH-Q 225
+++ + HPN+++L G+ T Y++ +M + +L + V YM Q
Sbjct: 62 VMKEIKHPNLVQLLGVCTRE--PPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 226 LLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYR 285
+ S +E+ +HRD+ N L+ ++ ++K+ADFGL+ + + +
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 286 PPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKL 334
PE L + + D+W+ G +L E+ G PG L ++Y+L
Sbjct: 180 APE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYEL 224
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 9/209 (4%)
Query: 106 ALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMARE 165
+L+ W R D K K+G G + VY+ VA+K ++ D +E E +E
Sbjct: 2 SLDKWEMERTDITMK-HKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKE 57
Query: 166 ILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMH 224
+++ + HPN+++L G+ T Y++ +M + +L + V YM
Sbjct: 58 AAVMKEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA 115
Query: 225 -QLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLW 283
Q+ S +E+ +HRD+ N L+ ++ ++K+ADFGL+ + +
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 175
Query: 284 YRPPELLLGATDYGVGVDLWSAGCILAEL 312
+ PE L + + D+W+ G +L E+
Sbjct: 176 WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 18/212 (8%)
Query: 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVR--FDNLEPESVKFMAREILILRRLDHPNVIK 179
+K G+G + VYK + VA+KK+ D E + +EI + + H N+++
Sbjct: 28 NKXGEGGFGVVYKG--YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVE 85
Query: 180 LEGLVTSRMSCSLYLVFHYMEHD-----LAGLAASPEVKFTEPQVKCYMHQ-LLSGLEHC 233
L G S L LV+ Y + L+ L +P + + +C + Q +G+
Sbjct: 86 LLGF--SSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSW---HXRCKIAQGAANGINFL 140
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV-TLWYRPPELLLG 292
H N +HRDIK +N+L+D+ KI+DFGLA + + SR+V T Y PE L G
Sbjct: 141 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRG 200
Query: 293 ATDYGVGVDLWSAGCILAELLAGKPIMPGRTE 324
+ D++S G +L E++ G P + E
Sbjct: 201 --EITPKSDIYSFGVVLLEIITGLPAVDEHRE 230
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 14/230 (6%)
Query: 108 NGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREIL 167
+ W R D K K+G G Y VY+ VA+K ++ D +E E +E
Sbjct: 6 DKWEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAA 61
Query: 168 ILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMH-Q 225
+++ + HPN+++L G+ T Y++ +M + +L + V YM Q
Sbjct: 62 VMKEIKHPNLVQLLGVCTRE--PPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 226 LLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYR 285
+ S +E+ +HRD+ N L+ ++ ++K+ADFGL+ + + +
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 286 PPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKL 334
PE L + + D+W+ G +L E+ G PG L ++Y+L
Sbjct: 180 APE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYEL 224
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 14/230 (6%)
Query: 108 NGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREIL 167
+ W R D K K+G G Y VY+ VA+K ++ D +E E +E
Sbjct: 11 DKWEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAA 66
Query: 168 ILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMH-Q 225
+++ + HPN+++L G+ T Y++ +M + +L + V YM Q
Sbjct: 67 VMKEIKHPNLVQLLGVCTRE--PPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 124
Query: 226 LLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYR 285
+ S +E+ +HRD+ N L+ ++ ++K+ADFGL+ + + +
Sbjct: 125 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 286 PPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKL 334
PE L + + D+W+ G +L E+ G PG L ++Y+L
Sbjct: 185 APE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYEL 229
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 111/253 (43%), Gaps = 14/253 (5%)
Query: 69 ERKRSKSNPRLSNLPKHLRGEQVAAGWPP--WLTAVCGEALNGWIPRRADSFEKIDKIGQ 126
+ K K NP L +PK + + PP + C N +AD E I ++G+
Sbjct: 3 QSKGKKRNPGL-KIPKEAFEQPQTSSTPPRDLDSKACISIGNQNFEVKADDLEPIMELGR 61
Query: 127 GTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTS 186
G Y V K + + +G+I+A+K++R E + + + +R +D P + G +
Sbjct: 62 GAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR 121
Query: 187 RMSCSLYLVFHYMEHDLAGLAASPEVK---FTEPQVKCYMHQLLSGLEHCHNN-GVLHRD 242
+++ M+ L K E + ++ LEH H+ V+HRD
Sbjct: 122 E--GDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRD 179
Query: 243 IKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELL---LGATDYGVG 299
+K SN+LI+ G +K+ DFG++ + + + + Y PE + L Y V
Sbjct: 180 VKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKP--YMAPERINPELNQKGYSVK 237
Query: 300 VDLWSAGCILAEL 312
D+WS G + EL
Sbjct: 238 SDIWSLGITMIEL 250
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 9/209 (4%)
Query: 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD 173
+ D FEKI ++G G V+K +G ++A K + + ++P + RE+ +L +
Sbjct: 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECN 62
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
P ++ G S S+ + +M+ + E + ++ GL +
Sbjct: 63 SPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 234 -HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
+ ++HRD+K SN+L++ G +K+ DFG++ + + S V T Y PE L G
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQG 177
Query: 293 ATDYGVGVDLWSAGCILAELLAGK-PIMP 320
T Y V D+WS G L E+ G+ PI P
Sbjct: 178 -THYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 25/233 (10%)
Query: 100 TAVCGEALNGWIPRRADSFEKIDKIGQGTYSNVY------KAKDMLTGKIVALKKVRFDN 153
+A+ E + IP IG+G + VY +A++ + I +L ++
Sbjct: 5 SALLAEVKDVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT--- 61
Query: 154 LEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEV 212
E + V+ RE L++R L+HPNV+ L G++ +++ YM H DL SP+
Sbjct: 62 -EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLP-HVLLPYMCHGDLLQFIRSPQR 119
Query: 213 KFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLAS------- 265
T + + Q+ G+E+ +HRD+ N ++D+ +K+ADFGLA
Sbjct: 120 NPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREY 179
Query: 266 FFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKP 317
+ H+H +R+ W L + D+WS G +L ELL G P
Sbjct: 180 YSVQQHRH---ARLPVKWTALES--LQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 9/209 (4%)
Query: 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD 173
+ D FEKI ++G G V+K +G ++A K + + ++P + RE+ +L +
Sbjct: 31 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECN 89
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
P ++ G S S+ + +M+ + E + ++ GL +
Sbjct: 90 SPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 147
Query: 234 -HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
+ ++HRD+K SN+L++ G +K+ DFG++ + + S V T Y PE L G
Sbjct: 148 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQG 204
Query: 293 ATDYGVGVDLWSAGCILAELLAGK-PIMP 320
T Y V D+WS G L E+ G+ PI P
Sbjct: 205 -THYSVQSDIWSMGLSLVEMAVGRYPIPP 232
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 8/222 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
+ FE I IG+G + V K T +I A+K + +++ L+ E +L D
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 149
Query: 175 PNVIKLEGLVTSRMSCSLYLVF-HYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
+ L + LYLV +Y+ DL L + E K E + Y+ +++ ++
Sbjct: 150 QWITALH--YAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSI 207
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H +HRDIK N+L+D +G +++ADFG + + + V T Y PE+L
Sbjct: 208 HQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAM 267
Query: 294 TD----YGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
D YG D WS G + E+L G+ + VE KI
Sbjct: 268 EDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 309
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 9/209 (4%)
Query: 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD 173
+ D FEKI ++G G V+K +G ++A K + + ++P + RE+ +L +
Sbjct: 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECN 62
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
P ++ G S S+ + +M+ + E + ++ GL +
Sbjct: 63 SPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 234 -HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
+ ++HRD+K SN+L++ G +K+ DFG++ + + S V T Y PE L G
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQG 177
Query: 293 ATDYGVGVDLWSAGCILAELLAGK-PIMP 320
T Y V D+WS G L E+ G+ PI P
Sbjct: 178 -THYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 14/230 (6%)
Query: 108 NGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREIL 167
+ W R D K K+G G Y VY+ VA+K ++ D +E E +E
Sbjct: 11 DKWEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAA 66
Query: 168 ILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMH-Q 225
+++ + HPN+++L G+ T Y++ +M + +L + V YM Q
Sbjct: 67 VMKEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 124
Query: 226 LLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYR 285
+ S +E+ +HRD+ N L+ ++ ++K+ADFGL+ + + +
Sbjct: 125 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT 184
Query: 286 PPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKL 334
PE L + + D+W+ G +L E+ G PG L ++Y+L
Sbjct: 185 APE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYEL 229
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 8/222 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
+ FE I IG+G + V K T +I A+K + +++ L+ E +L D
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 133
Query: 175 PNVIKLEGLVTSRMSCSLYLVF-HYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
+ L + LYLV +Y+ DL L + E K E + Y+ +++ ++
Sbjct: 134 QWITALH--YAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSI 191
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H +HRDIK N+L+D +G +++ADFG + + + V T Y PE+L
Sbjct: 192 HQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAM 251
Query: 294 TD----YGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
D YG D WS G + E+L G+ + VE KI
Sbjct: 252 EDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 293
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 9/209 (4%)
Query: 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD 173
+ D FEKI ++G G V+K +G ++A K + + ++P + RE+ +L +
Sbjct: 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECN 62
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
P ++ G S S+ + +M+ + E + ++ GL +
Sbjct: 63 SPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 234 -HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
+ ++HRD+K SN+L++ G +K+ DFG++ + + S V T Y PE L G
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQG 177
Query: 293 ATDYGVGVDLWSAGCILAELLAGK-PIMP 320
T Y V D+WS G L E+ G+ PI P
Sbjct: 178 -THYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 14/230 (6%)
Query: 108 NGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREIL 167
+ W R D K K+G G Y VY+ VA+K ++ D +E E +E
Sbjct: 6 DKWEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAA 61
Query: 168 ILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMH-Q 225
+++ + HPN+++L G+ T Y++ +M + +L + V YM Q
Sbjct: 62 VMKEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 226 LLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYR 285
+ S +E+ +HRD+ N L+ ++ ++K+ADFGL+ + + +
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 286 PPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKL 334
PE L + + D+W+ G +L E+ G PG L ++Y+L
Sbjct: 180 APE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYEL 224
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 16/203 (7%)
Query: 121 IDKIGQGTYSNV----YKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
I ++G+G + +V Y TG +VA+K+++ P+ + REI IL+ L
Sbjct: 12 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--PDQQRDFQREIQILKALHSDF 69
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
++K G+ L LV Y+ L + ++ Y Q+ G+E+ +
Sbjct: 70 IVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 129
Query: 236 NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH-----KHPMTSRVVTLWYRPPELL 290
+HRD+ N+L++ + +KIADFGLA + + P S + WY P
Sbjct: 130 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPI--FWYAPES-- 185
Query: 291 LGATDYGVGVDLWSAGCILAELL 313
L + D+WS G +L EL
Sbjct: 186 LSDNIFSRQSDVWSFGVVLYELF 208
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 14/230 (6%)
Query: 108 NGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREIL 167
+ W R D K K+G G Y VY+ VA+K ++ D +E E +E
Sbjct: 11 DKWEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAA 66
Query: 168 ILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMH-Q 225
+++ + HPN+++L G+ T Y++ +M + +L + V YM Q
Sbjct: 67 VMKEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 124
Query: 226 LLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYR 285
+ S +E+ +HRD+ N L+ ++ ++K+ADFGL+ + + +
Sbjct: 125 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 286 PPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKL 334
PE L + + D+W+ G +L E+ G PG L ++Y+L
Sbjct: 185 APE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYEL 229
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 14/230 (6%)
Query: 108 NGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREIL 167
+ W R D K K+G G Y VY+ VA+K ++ D +E E +E
Sbjct: 6 DKWEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAA 61
Query: 168 ILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMH-Q 225
+++ + HPN+++L G+ T Y++ +M + +L + V YM Q
Sbjct: 62 VMKEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 226 LLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYR 285
+ S +E+ +HRD+ N L+ ++ ++K+ADFGL+ + + +
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 286 PPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKL 334
PE L + + D+W+ G +L E+ G PG L ++Y+L
Sbjct: 180 APE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYEL 224
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 24/228 (10%)
Query: 108 NGW-IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREI 166
+ W IPR + EK K+G G + V+ A K VA+K ++ ++ E+ F+A E
Sbjct: 175 DAWEIPRESLKLEK--KLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEA--FLA-EA 228
Query: 167 LILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD--LAGLAASPEVKFTEPQVKCYMH 224
+++ L H ++KL +VT +Y++ +M L L + K P++ +
Sbjct: 229 NVMKTLQHDKLVKLHAVVTKE---PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA 285
Query: 225 QLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWY 284
Q+ G+ +HRD++ +N+L+ V KIADFGLA K P+ W
Sbjct: 286 QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV---GAKFPIK------WT 336
Query: 285 RPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKI 331
P + G+ + + D+WS G +L E++ G+ PG + E + +
Sbjct: 337 APEAINFGS--FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 382
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 9/209 (4%)
Query: 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD 173
+ D FEKI ++G G V+K +G ++A K + + ++P + RE+ +L +
Sbjct: 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECN 62
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
P ++ G S S+ + +M+ + E + ++ GL +
Sbjct: 63 SPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 234 -HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
+ ++HRD+K SN+L++ G +K+ DFG++ + + S V T Y PE L G
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQG 177
Query: 293 ATDYGVGVDLWSAGCILAELLAGK-PIMP 320
T Y V D+WS G L E+ G+ PI P
Sbjct: 178 -THYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 9/209 (4%)
Query: 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD 173
+ D FEKI ++G G V+K +G ++A K + + ++P + RE+ +L +
Sbjct: 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECN 62
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
P ++ G S S+ + +M+ + E + ++ GL +
Sbjct: 63 SPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 234 -HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
+ ++HRD+K SN+L++ G +K+ DFG++ + + S V T Y PE L G
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQG 177
Query: 293 ATDYGVGVDLWSAGCILAELLAGK-PIMP 320
T Y V D+WS G L E+ G+ PI P
Sbjct: 178 -THYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 14/230 (6%)
Query: 108 NGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREIL 167
+ W R D K K+G G Y VY+ VA+K ++ D +E E +E
Sbjct: 11 DKWEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAA 66
Query: 168 ILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMH-Q 225
+++ + HPN+++L G+ T Y++ +M + +L + V YM Q
Sbjct: 67 VMKEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 124
Query: 226 LLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYR 285
+ S +E+ +HRD+ N L+ ++ ++K+ADFGL+ + + +
Sbjct: 125 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 286 PPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKL 334
PE L + + D+W+ G +L E+ G PG L ++Y+L
Sbjct: 185 APE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYEL 229
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 14/230 (6%)
Query: 108 NGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREIL 167
+ W R D K K+G G Y VY+ VA+K ++ D +E E +E
Sbjct: 6 DKWEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAA 61
Query: 168 ILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMH-Q 225
+++ + HPN+++L G+ T Y++ +M + +L + V YM Q
Sbjct: 62 VMKEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 119
Query: 226 LLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYR 285
+ S +E+ +HRD+ N L+ ++ ++K+ADFGL+ + + +
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 286 PPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKL 334
PE L + + D+W+ G +L E+ G PG L ++Y+L
Sbjct: 180 APE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYEL 224
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 14/230 (6%)
Query: 108 NGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREIL 167
+ W R D K K+G G Y VY+ VA+K ++ D +E E +E
Sbjct: 8 DKWEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAA 63
Query: 168 ILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMH-Q 225
+++ + HPN+++L G+ T Y++ +M + +L + V YM Q
Sbjct: 64 VMKEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 121
Query: 226 LLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYR 285
+ S +E+ +HRD+ N L+ ++ ++K+ADFGL+ + + +
Sbjct: 122 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 181
Query: 286 PPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKL 334
PE L + + D+W+ G +L E+ G PG L ++Y+L
Sbjct: 182 APE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYEL 226
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 14/230 (6%)
Query: 108 NGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREIL 167
+ W R D K K+G G Y VY+ VA+K ++ D +E E +E
Sbjct: 11 DKWEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAA 66
Query: 168 ILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMH-Q 225
+++ + HPN+++L G+ T Y++ +M + +L + V YM Q
Sbjct: 67 VMKEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 124
Query: 226 LLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYR 285
+ S +E+ +HRD+ N L+ ++ ++K+ADFGL+ + + +
Sbjct: 125 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 286 PPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKL 334
PE L + + D+W+ G +L E+ G PG L ++Y+L
Sbjct: 185 APE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYEL 229
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 14/230 (6%)
Query: 108 NGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREIL 167
+ W R D K K+G G Y VY+ VA+K ++ D +E E +E
Sbjct: 19 DKWEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAA 74
Query: 168 ILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMH-Q 225
+++ + HPN+++L G+ T Y++ +M + +L + V YM Q
Sbjct: 75 VMKEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 132
Query: 226 LLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYR 285
+ S +E+ +HRD+ N L+ ++ ++K+ADFGL+ + + +
Sbjct: 133 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 192
Query: 286 PPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKL 334
PE L + + D+W+ G +L E+ G PG L ++Y+L
Sbjct: 193 APE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYEL 237
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 14/230 (6%)
Query: 108 NGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREIL 167
+ W R D K K+G G Y VY+ VA+K ++ D +E E +E
Sbjct: 8 DKWEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAA 63
Query: 168 ILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMH-Q 225
+++ + HPN+++L G+ T Y++ +M + +L + V YM Q
Sbjct: 64 VMKEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 121
Query: 226 LLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYR 285
+ S +E+ +HRD+ N L+ ++ ++K+ADFGL+ + + +
Sbjct: 122 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 181
Query: 286 PPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKL 334
PE L + + D+W+ G +L E+ G PG L ++Y+L
Sbjct: 182 APE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYEL 226
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 111/251 (44%), Gaps = 28/251 (11%)
Query: 162 MAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQ--- 218
E+ I+ + + + EG++T+ +Y+++ YME+D + E F +
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDE--VYIIYEYMEND--SILKFDEYFFVLDKNYT 145
Query: 219 -------VKCYMHQLLSGLEHCHN-NGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN 270
+KC + +L+ + HN + HRD+K SN+L+D +G +K++DFG + +
Sbjct: 146 CFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVD- 204
Query: 271 HKHPMTSRVVTLWYRPPELLLGATDY-GVGVDLWSAGCILAELLAGKPIMPGRTEVEQLH 329
K SR T + PPE + Y G VD+WS G L + ++P ++ L
Sbjct: 205 -KKIKGSR-GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYN--VVPFSLKI-SLV 259
Query: 330 KIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAE 389
+++ + + EY L P K F + ++ L +PAE
Sbjct: 260 ELFNNIRTKNIEY----PLDRNHFLYPLTNKKSTCSNNF--LSNEDIDFLKLFLRKNPAE 313
Query: 390 RLTATVALNSE 400
R+T+ AL E
Sbjct: 314 RITSEDALKHE 324
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 14/230 (6%)
Query: 108 NGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREIL 167
+ W R D K K+G G Y VY+ VA+K ++ D +E E +E
Sbjct: 10 DKWEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAA 65
Query: 168 ILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMH-Q 225
+++ + HPN+++L G+ T Y++ +M + +L + V YM Q
Sbjct: 66 VMKEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 123
Query: 226 LLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYR 285
+ S +E+ +HRD+ N L+ ++ ++K+ADFGL+ + + +
Sbjct: 124 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 183
Query: 286 PPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKL 334
PE L + + D+W+ G +L E+ G PG L ++Y+L
Sbjct: 184 APE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYEL 228
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 14/230 (6%)
Query: 108 NGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREIL 167
+ W R D K K+G G Y VY+ VA+K ++ D +E E +E
Sbjct: 6 DKWEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAA 61
Query: 168 ILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMH-Q 225
+++ + HPN+++L G+ T Y++ +M + +L + V YM Q
Sbjct: 62 VMKEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 119
Query: 226 LLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYR 285
+ S +E+ +HRD+ N L+ ++ ++K+ADFGL+ + + +
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 286 PPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKL 334
PE L + + D+W+ G +L E+ G PG L ++Y+L
Sbjct: 180 APE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYEL 224
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 108/231 (46%), Gaps = 24/231 (10%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
+ E + ++G GT V+K + TG ++A+K++R + E+ + + ++L+ D P
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCP 84
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEP--------QVKCYMHQLL 227
+++ G + VF ME L G A K + ++ + + L
Sbjct: 85 YIVQCFGTFITNTD-----VFIAME--LMGTCAEKLKKRMQGPIPERILGKMTVAIVKAL 137
Query: 228 SGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
L+ H GV+HRD+K SN+L+D+ G +K+ DFG++ + ++ Y P
Sbjct: 138 YYLKEKH--GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAA--YMAP 193
Query: 288 ELL----LGATDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYK 333
E + DY + D+WS G L EL G+ P +T+ E L K+ +
Sbjct: 194 ERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ 244
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 9/210 (4%)
Query: 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD 173
+ D FEKI ++G G V+K +G ++A K + + ++P + RE+ +L +
Sbjct: 23 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECN 81
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
P ++ G S S+ + +M+ + E + ++ GL +
Sbjct: 82 SPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 139
Query: 234 -HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
+ ++HRD+K SN+L++ G +K+ DFG++ + + S V T Y PE L G
Sbjct: 140 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQG 196
Query: 293 ATDYGVGVDLWSAGCILAELLAGK-PIMPG 321
T Y V D+WS G L E+ G+ PI G
Sbjct: 197 -THYSVQSDIWSMGLSLVEMAVGRYPIGSG 225
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 140/342 (40%), Gaps = 73/342 (21%)
Query: 107 LNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKI-VALKKVRFDNLEPESVKFMARE 165
+ W+ R +E + +G+GT+ V + D GK VALK +R E+ + E
Sbjct: 45 IGDWLQER---YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL---E 98
Query: 166 ILILRRLDHPNVIKLEGLVTSRMSCSL---YLVFH---YMEHDLAGLAASPEVK------ 213
I +L+++ E ++ C L + FH + +L G +K
Sbjct: 99 INVLKKIK-------EKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQP 151
Query: 214 FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD-------------------DG 254
+ P V+ +QL L H N + H D+K N+L + +
Sbjct: 152 YPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNT 211
Query: 255 VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+++ADFG A+F +H+H T+ V T YRPPE++L + D+WS GCIL E
Sbjct: 212 SIRVADFGSATF---DHEHH-TTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYR 266
Query: 315 GKPIMPGRTEVEQLHKIYKLCG---------SPSEEYWKKSKLPNATLFKPREPYKRCIQ 365
G + E L + K+ G + ++Y+ K L ++ R ++
Sbjct: 267 GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGL----VWDENSSDGRYVK 322
Query: 366 ETFKDFPPSSLP----------LIETLLAIDPAERLTATVAL 397
E K L L+ +L DPA+R+T AL
Sbjct: 323 ENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEAL 364
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 140/342 (40%), Gaps = 73/342 (21%)
Query: 107 LNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKI-VALKKVRFDNLEPESVKFMARE 165
+ W+ R +E + +G+GT+ V + D GK VALK +R E+ + E
Sbjct: 22 IGDWLQER---YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL---E 75
Query: 166 ILILRRLDHPNVIKLEGLVTSRMSCSL---YLVFH---YMEHDLAGLAASPEVK------ 213
I +L+++ E ++ C L + FH + +L G +K
Sbjct: 76 INVLKKIK-------EKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQP 128
Query: 214 FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD-------------------DG 254
+ P V+ +QL L H N + H D+K N+L + +
Sbjct: 129 YPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNT 188
Query: 255 VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+++ADFG A+F +H+H T+ V T YRPPE++L + D+WS GCIL E
Sbjct: 189 SIRVADFGSATF---DHEH-HTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYR 243
Query: 315 GKPIMPGRTEVEQLHKIYKLCG---------SPSEEYWKKSKLPNATLFKPREPYKRCIQ 365
G + E L + K+ G + ++Y+ K L ++ R ++
Sbjct: 244 GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGL----VWDENSSDGRYVK 299
Query: 366 ETFKDFPPSSLP----------LIETLLAIDPAERLTATVAL 397
E K L L+ +L DPA+R+T AL
Sbjct: 300 ENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEAL 341
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 140/342 (40%), Gaps = 73/342 (21%)
Query: 107 LNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKI-VALKKVRFDNLEPESVKFMARE 165
+ W+ R +E + +G+GT+ V + D GK VALK +R E+ + E
Sbjct: 13 IGDWLQER---YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL---E 66
Query: 166 ILILRRLDHPNVIKLEGLVTSRMSCSL---YLVFH---YMEHDLAGLAASPEVK------ 213
I +L+++ E ++ C L + FH + +L G +K
Sbjct: 67 INVLKKIK-------EKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQP 119
Query: 214 FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD-------------------DG 254
+ P V+ +QL L H N + H D+K N+L + +
Sbjct: 120 YPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNT 179
Query: 255 VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+++ADFG A+F +H+H T+ V T YRPPE++L + D+WS GCIL E
Sbjct: 180 SIRVADFGSATF---DHEH-HTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYR 234
Query: 315 GKPIMPGRTEVEQLHKIYKLCG---------SPSEEYWKKSKLPNATLFKPREPYKRCIQ 365
G + E L + K+ G + ++Y+ K L ++ R ++
Sbjct: 235 GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGL----VWDENSSDGRYVK 290
Query: 366 ETFKDFPPSSLP----------LIETLLAIDPAERLTATVAL 397
E K L L+ +L DPA+R+T AL
Sbjct: 291 ENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEAL 332
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 18/216 (8%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDN-LEPESVKFMAREILILRRLDHPNVIKLEG 182
+G+G++ V ++ T ++ A+K ++ D ++ + V+ E +L P
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP------ 402
Query: 183 LVTSRMSC-----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNG 237
+T SC LY V Y+ +F EP Y ++ GL + G
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG 462
Query: 238 VLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV--TLWYRPPELLLGATD 295
+++RD+K N+++D +G +KIADFG+ N +T++ T Y PE ++
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIAPE-IIAYQP 518
Query: 296 YGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
YG VD W+ G +L E+LAG+ G E E I
Sbjct: 519 YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI 554
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 74
Query: 177 VIKLEGLVTSRMSCSLYLVFHYME--HDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
VI+L L S L+ ME DL E + + Q+L + HCH
Sbjct: 75 VIRL--LDWFERPDSFVLILERMEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCH 131
Query: 235 NNGVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLG 292
N GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 132 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRY 187
Query: 293 ATDYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 188 HRYHGRSAAVWSLGILLYDMVCG 210
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 18/216 (8%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDN-LEPESVKFMAREILILRRLDHPNVIKLEG 182
+G+G++ V ++ T ++ A+K ++ D ++ + V+ E +L P
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP------ 81
Query: 183 LVTSRMSC-----SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNG 237
+T SC LY V Y+ +F EP Y ++ GL + G
Sbjct: 82 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG 141
Query: 238 VLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVV--TLWYRPPELLLGATD 295
+++RD+K N+++D +G +KIADFG+ N +T++ T Y PE ++
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIAPE-IIAYQP 197
Query: 296 YGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
YG VD W+ G +L E+LAG+ G E E I
Sbjct: 198 YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI 233
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 104/212 (49%), Gaps = 18/212 (8%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH 174
+D+F + +G+G + VYK + + G +VA+K+++ + + ++F E+ ++ H
Sbjct: 37 SDNFSNKNILGRGGFGKVYKGR-LADGTLVAVKRLKEERXQGGELQFQT-EVEMISMAVH 94
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG--LAASPEVKFTEPQVKCYMHQLLS---- 228
N+++L G + LV+ YM + L PE ++P + Q ++
Sbjct: 95 RNLLRLRGFCMT--PTERLLVYPYMANGSVASCLRERPE---SQPPLDWPKRQRIALGSA 149
Query: 229 -GLEHCHNN---GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWY 284
GL + H++ ++HRD+K +N+L+D++ + DFGLA D H + T+ +
Sbjct: 150 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGH 209
Query: 285 RPPELLLGATDYGVGVDLWSAGCILAELLAGK 316
PE L D++ G +L EL+ G+
Sbjct: 210 IAPE-YLSTGKSSEKTDVFGYGVMLLELITGQ 240
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 6/195 (3%)
Query: 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLE 181
++IG+G + V+ + +VA+K R + L P+ +E IL++ HPN+++L
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 182 GLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLH 240
G+ T + +Y+V ++ D + + + + +G+E+ + +H
Sbjct: 179 GVCTQKQP--IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIH 236
Query: 241 RDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVG 299
RD+ N L+ + VLKI+DFG++ D + R V + + PE L Y
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPE-ALNYGRYSSE 295
Query: 300 VDLWSAGCILAELLA 314
D+WS G +L E +
Sbjct: 296 SDVWSFGILLWETFS 310
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 13/239 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE----SVKFMAREILILRR 171
D ++ +++G G ++ V K ++ TG A K ++ S + + RE+ ILR+
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 172 LDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ H NVI L + +R L L +L A E +E + ++ Q+L G+
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILEL-VSGGELFDFLAQKE-SLSEEEATSFIKQILDGVN 129
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGV----LKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ H + H D+K N+++ D + +K+ DFGLA + + + T + P
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTPEFVAP 187
Query: 288 ELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS 346
E ++ G+ D+WS G I LL+G G T+ E L I + EE++ ++
Sbjct: 188 E-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT 245
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLE 181
+KIG G++ V++A+ G VA+K + + E V RE+ I++RL HPN++
Sbjct: 43 EKIGAGSFGTVHRAE--WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 182 GLVTSRMSCSLYLVFHYME----HDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNG 237
G VT +L +V Y+ + L + + E + E + + + G+ + HN
Sbjct: 101 GAVTQ--PPNLSIVTEYLSRGSLYRLLHKSGARE-QLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 238 --VLHRDIKGSNLLIDDDGVLKIADFGLA 264
++HRD+K NLL+D +K+ DFGL+
Sbjct: 158 PPIVHRDLKSPNLLVDKKYTVKVCDFGLS 186
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 13/239 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE----SVKFMAREILILRR 171
D ++ +++G G ++ V K ++ TG A K ++ S + + RE+ ILR+
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 172 LDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ H NVI L + +R L L +L A E +E + ++ Q+L G+
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILEL-VSGGELFDFLAQKE-SLSEEEATSFIKQILDGVN 129
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGV----LKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ H + H D+K N+++ D + +K+ DFGLA + + + T + P
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTPEFVAP 187
Query: 288 ELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS 346
E ++ G+ D+WS G I LL+G G T+ E L I + EE++ ++
Sbjct: 188 E-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT 245
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 14/228 (6%)
Query: 110 WIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILIL 169
W R D K K+G G Y VY+ VA+K ++ D +E E +F+ +E ++
Sbjct: 215 WEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--EFL-KEAAVM 270
Query: 170 RRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMH-QLL 227
+ + HPN+++L G+ T Y++ +M + +L + V YM Q+
Sbjct: 271 KEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 328
Query: 228 SGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
S +E+ +HR++ N L+ ++ ++K+ADFGL+ + + + P
Sbjct: 329 SAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 388
Query: 288 ELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKL 334
E L + + D+W+ G +L E+ G PG L ++Y+L
Sbjct: 389 E-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYEL 431
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLE 181
+KIG G++ V++A+ G VA+K + + E V RE+ I++RL HPN++
Sbjct: 43 EKIGAGSFGTVHRAE--WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 182 GLVTSRMSCSLYLVFHYME----HDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNG 237
G VT +L +V Y+ + L + + E + E + + + G+ + HN
Sbjct: 101 GAVTQ--PPNLSIVTEYLSRGSLYRLLHKSGARE-QLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 238 --VLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATD 295
++HR++K NLL+D +K+ DFGL+ ++ W P +L
Sbjct: 158 PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPE--VLRDEP 215
Query: 296 YGVGVDLWSAGCILAEL 312
D++S G IL EL
Sbjct: 216 SNEKSDVYSFGVILWEL 232
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 24/236 (10%)
Query: 109 GWIPRRADSF-----EKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA 163
G+ P R +SF +++ ++G G+Y V+K + G++ A+K+ P+
Sbjct: 45 GYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKL 104
Query: 164 REILILRRL-DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCY 222
E+ ++ HP ++LE LYL L + E QV Y
Sbjct: 105 AEVGSHEKVGQHPCCVRLE--QAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGY 162
Query: 223 MHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGL------ASFFDPNHKHPMT 276
+ L L H H+ G++H D+K +N+ + G K+ DFGL A + P
Sbjct: 163 LRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR- 221
Query: 277 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIY 332
Y PELL G+ YG D++S G + E+ + G +QL + Y
Sbjct: 222 -------YMAPELLQGS--YGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGY 268
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 110/240 (45%), Gaps = 23/240 (9%)
Query: 108 NGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREIL 167
N I + + + +IG G S V++ + +I A+K V + + +++ EI
Sbjct: 1 NECISVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIA 59
Query: 168 ILRRLDHPN--VIKLEGL-VTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEP-QVKCYM 223
L +L + +I+L +T + +Y+V DL K +P + K Y
Sbjct: 60 YLNKLQQHSDKIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKK--KSIDPWERKSYW 114
Query: 224 HQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMT-SRVVTL 282
+L + H +G++H D+K +N LI DG+LK+ DFG+A+ P+ + S+V T+
Sbjct: 115 KNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 173
Query: 283 WYRPPELLLGATD----------YGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKI 331
Y PPE + + D+WS GCIL + GK P ++ +LH I
Sbjct: 174 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 233
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 14/228 (6%)
Query: 110 WIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILIL 169
W R D K K+G G Y VY+ VA+K ++ D +E E +F+ +E ++
Sbjct: 212 WEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--EFL-KEAAVM 267
Query: 170 RRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMH-QLL 227
+ + HPN+++L G+ T Y++ +M + +L + V YM Q+
Sbjct: 268 KEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 325
Query: 228 SGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
S +E+ +HR++ N L+ ++ ++K+ADFGL+ + + + P
Sbjct: 326 SAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 385
Query: 288 ELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKL 334
E L + + D+W+ G +L E+ G PG L ++Y+L
Sbjct: 386 E-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYEL 428
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 111/242 (45%), Gaps = 23/242 (9%)
Query: 106 ALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMARE 165
+ N I + + + +IG G S V++ + +I A+K V + + +++ E
Sbjct: 46 SANECISVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNE 104
Query: 166 ILILRRLDHPN--VIKLEGL-VTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEP-QVKC 221
I L +L + +I+L +T + +Y+V DL K +P + K
Sbjct: 105 IAYLNKLQQHSDKIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKK--KSIDPWERKS 159
Query: 222 YMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMT-SRVV 280
Y +L + H +G++H D+K +N LI DG+LK+ DFG+A+ P+ + S+V
Sbjct: 160 YWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVG 218
Query: 281 TLWYRPPELLLGATD----------YGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLH 329
T+ Y PPE + + D+WS GCIL + GK P ++ +LH
Sbjct: 219 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 278
Query: 330 KI 331
I
Sbjct: 279 AI 280
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 110/242 (45%), Gaps = 23/242 (9%)
Query: 106 ALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMARE 165
+ N I + + + +IG G S V++ + +I A+K V + + +++ E
Sbjct: 46 SANECISVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNE 104
Query: 166 ILILRRLDH--PNVIKLEGL-VTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEP-QVKC 221
I L +L +I+L +T + +Y+V DL K +P + K
Sbjct: 105 IAYLNKLQQHSDKIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKK--KSIDPWERKS 159
Query: 222 YMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMT-SRVV 280
Y +L + H +G++H D+K +N LI DG+LK+ DFG+A+ P+ + S+V
Sbjct: 160 YWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVG 218
Query: 281 TLWYRPPELLLGATD----------YGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLH 329
T+ Y PPE + + D+WS GCIL + GK P ++ +LH
Sbjct: 219 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 278
Query: 330 KI 331
I
Sbjct: 279 AI 280
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 14/228 (6%)
Query: 110 WIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILIL 169
W R D K K+G G Y VY+ VA+K ++ D +E E +F+ +E ++
Sbjct: 254 WEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--EFL-KEAAVM 309
Query: 170 RRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMH-QLL 227
+ + HPN+++L G+ T Y++ +M + +L + V YM Q+
Sbjct: 310 KEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 367
Query: 228 SGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
S +E+ +HR++ N L+ ++ ++K+ADFGL+ + + + P
Sbjct: 368 SAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 427
Query: 288 ELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYKL 334
E L + + D+W+ G +L E+ G PG L ++Y+L
Sbjct: 428 E-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYEL 470
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 13/236 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE----SVKFMAREILILRR 171
D ++ +++G G ++ V K ++ TG A K ++ S + + RE+ ILR+
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 172 LDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ H NVI L + +R L L +L A E +E + ++ Q+L G+
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILEL-VSGGELFDFLAQKE-SLSEEEATSFIKQILDGVN 129
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGV----LKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ H + H D+K N+++ D + +K+ DFGLA + + + T + P
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTPEFVAP 187
Query: 288 ELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYW 343
E ++ G+ D+WS G I LL+G G T+ E L I + EE++
Sbjct: 188 E-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFF 242
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 8/204 (3%)
Query: 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD 173
+ D FEKI ++G G V+K +G ++A K + + ++P + RE+ +L +
Sbjct: 7 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECN 65
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
P ++ G S S+ + +M+ + E + ++ GL +
Sbjct: 66 SPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 123
Query: 234 -HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLG 292
+ ++HRD+K SN+L++ G +K+ DFG++ + V T Y PE L G
Sbjct: 124 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEF---VGTRSYMSPERLQG 180
Query: 293 ATDYGVGVDLWSAGCILAELLAGK 316
T Y V D+WS G L E+ G+
Sbjct: 181 -THYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 13/236 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE----SVKFMAREILILRR 171
D ++ +++G G ++ V K ++ TG A K ++ S + + RE+ ILR+
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 172 LDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ H NVI L + +R L L +L A E +E + ++ Q+L G+
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILEL-VSGGELFDFLAQKE-SLSEEEATSFIKQILDGVN 129
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGV----LKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ H + H D+K N+++ D + +K+ DFGLA + + + T + P
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTPEFVAP 187
Query: 288 ELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYW 343
E ++ G+ D+WS G I LL+G G T+ E L I + EE++
Sbjct: 188 E-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFF 242
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 110/240 (45%), Gaps = 23/240 (9%)
Query: 108 NGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREIL 167
N I + + + +IG G S V++ + +I A+K V + + +++ EI
Sbjct: 4 NECISVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIA 62
Query: 168 ILRRLDHPN--VIKLEGL-VTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEP-QVKCYM 223
L +L + +I+L +T + +Y+V DL K +P + K Y
Sbjct: 63 YLNKLQQHSDKIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKK--KSIDPWERKSYW 117
Query: 224 HQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMT-SRVVTL 282
+L + H +G++H D+K +N LI DG+LK+ DFG+A+ P+ + S+V T+
Sbjct: 118 KNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 176
Query: 283 WYRPPELLLGATD----------YGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKI 331
Y PPE + + D+WS GCIL + GK P ++ +LH I
Sbjct: 177 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 236
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 95/214 (44%), Gaps = 11/214 (5%)
Query: 121 IDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
+ +IG G + V+ L VA+K +R + E E ++ +L HP +++L
Sbjct: 12 VQEIGSGQFGLVHLGY-WLNKDKVAIKTIREGAMSEED---FIEEAEVMMKLSHPKLVQL 67
Query: 181 EGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
G+ + + LVF +MEH L+ + F + + G+ + V+
Sbjct: 68 YGVCLEQ--APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVI 125
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLASF-FDPNHKHPMTSRVVTLWYRPPELLLGATDYGV 298
HRD+ N L+ ++ V+K++DFG+ F D + ++ W P + + Y
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE--VFSFSRYSS 183
Query: 299 GVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKI 331
D+WS G ++ E+ + GK R+ E + I
Sbjct: 184 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 13/239 (5%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPE----SVKFMAREILILRR 171
D ++ +++G G ++ V K ++ TG A K ++ S + + RE+ ILR+
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 172 LDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLE 231
+ H NVI L + +R L L +L A E +E + ++ Q+L G+
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILEL-VSGGELFDFLAQKE-SLSEEEATSFIKQILDGVN 129
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGV----LKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ H + H D+K N+++ D + +K+ DFGLA + + + T + P
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTPEFVAP 187
Query: 288 ELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKS 346
E ++ G+ D+WS G I LL+G G T+ E L I + EE++ +
Sbjct: 188 E-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT 245
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 107/242 (44%), Gaps = 29/242 (11%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH 174
A+ + + +IG+G Y +V K +G+I+A+K++R E E + + +++R D
Sbjct: 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDC 80
Query: 175 PNVIKLEG---------LVTSRMSCSLYLVFHYMEHDLAGLAASPEV-KFTEPQVKCYMH 224
P +++ G + MS S + Y+ L + + K T VK
Sbjct: 81 PYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVK---- 136
Query: 225 QLLSGLEHCHNN-GVLHRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHKHPMTSRVVTL 282
L H N ++HRDIK SN+L+D G +K+ DFG++ D K T
Sbjct: 137 ----ALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK---TRDAGCR 189
Query: 283 WYRPPELL---LGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEV-EQLHKIYKLCGSP 338
Y PE + Y V D+WS G L EL G+ P V +QL ++ K G P
Sbjct: 190 PYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK--GDP 247
Query: 339 SE 340
+
Sbjct: 248 PQ 249
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 8/222 (3%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
+ FE + IG+G + V K K+ A+K + +++ L+ E +L D
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 175 PNVIKLEGLVTSRMSCSLYLVF-HYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
+ L + +LYLV +Y+ DL L + E + E + Y+ +++ ++
Sbjct: 134 KWITTLH--YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSV 191
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLL-- 291
H +HRDIK N+L+D +G +++ADFG + + V T Y PE+L
Sbjct: 192 HQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAM 251
Query: 292 --GATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
G YG D WS G + E+L G+ + VE KI
Sbjct: 252 EGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 293
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 6/195 (3%)
Query: 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLE 181
++IG+G + V+ + +VA+K R + L P+ +E IL++ HPN+++L
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 182 GLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLH 240
G+ T + +Y+V ++ D + + + + +G+E+ + +H
Sbjct: 179 GVCTQKQP--IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIH 236
Query: 241 RDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVG 299
RD+ N L+ + VLKI+DFG++ D R V + + PE L Y
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPE-ALNYGRYSSE 295
Query: 300 VDLWSAGCILAELLA 314
D+WS G +L E +
Sbjct: 296 SDVWSFGILLWETFS 310
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 23/230 (10%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN- 176
+ + +IG G S V++ + +I A+K V + + +++ EI L +L +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 177 -VIKLEGL-VTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEP-QVKCYMHQLLSGLEHC 233
+I+L +T + +Y+V DL K +P + K Y +L +
Sbjct: 89 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTI 143
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMT-SRVVTLWYRPPELLLG 292
H +G++H D+K +N LI DG+LK+ DFG+A+ P+ + S+V T+ Y PPE +
Sbjct: 144 HQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 202
Query: 293 ATD----------YGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKI 331
+ D+WS GCIL + GK P ++ +LH I
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 252
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 23/230 (10%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN- 176
+ + +IG G S V++ + +I A+K V + + +++ EI L +L +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 177 -VIKLEGL-VTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEP-QVKCYMHQLLSGLEHC 233
+I+L +T + +Y+V DL K +P + K Y +L +
Sbjct: 89 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTI 143
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMT-SRVVTLWYRPPELLLG 292
H +G++H D+K +N LI DG+LK+ DFG+A+ P+ + S+V T+ Y PPE +
Sbjct: 144 HQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKD 202
Query: 293 ATD----------YGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKI 331
+ D+WS GCIL + GK P ++ +LH I
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 252
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 95/214 (44%), Gaps = 11/214 (5%)
Query: 121 IDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
+ +IG G + V+ L VA+K +R + E E ++ +L HP +++L
Sbjct: 15 VQEIGSGQFGLVHLGY-WLNKDKVAIKTIREGAMSEED---FIEEAEVMMKLSHPKLVQL 70
Query: 181 EGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
G+ + + LVF +MEH L+ + F + + G+ + V+
Sbjct: 71 YGVCLEQ--APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 128
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLASF-FDPNHKHPMTSRVVTLWYRPPELLLGATDYGV 298
HRD+ N L+ ++ V+K++DFG+ F D + ++ W P + + Y
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE--VFSFSRYSS 186
Query: 299 GVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKI 331
D+WS G ++ E+ + GK R+ E + I
Sbjct: 187 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 220
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 23/230 (10%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN- 176
+ + +IG G S V++ + +I A+K V + + +++ EI L +L +
Sbjct: 10 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 68
Query: 177 -VIKLEGL-VTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEP-QVKCYMHQLLSGLEHC 233
+I+L +T + +Y+V DL K +P + K Y +L +
Sbjct: 69 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTI 123
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMT-SRVVTLWYRPPELLLG 292
H +G++H D+K +N LI DG+LK+ DFG+A+ P+ + S+V T+ Y PPE +
Sbjct: 124 HQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 182
Query: 293 ATD----------YGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKI 331
+ D+WS GCIL + GK P ++ +LH I
Sbjct: 183 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 232
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 95/214 (44%), Gaps = 11/214 (5%)
Query: 121 IDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
+ +IG G + V+ L VA+K +R + E E ++ +L HP +++L
Sbjct: 10 VQEIGSGQFGLVHLGY-WLNKDKVAIKTIREGAMSEED---FIEEAEVMMKLSHPKLVQL 65
Query: 181 EGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
G+ + + LVF +MEH L+ + F + + G+ + V+
Sbjct: 66 YGVCLEQ--APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 123
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLASF-FDPNHKHPMTSRVVTLWYRPPELLLGATDYGV 298
HRD+ N L+ ++ V+K++DFG+ F D + ++ W P + + Y
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE--VFSFSRYSS 181
Query: 299 GVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKI 331
D+WS G ++ E+ + GK R+ E + I
Sbjct: 182 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 215
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 95/214 (44%), Gaps = 11/214 (5%)
Query: 121 IDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
+ +IG G + V+ L VA+K +R + E E ++ +L HP +++L
Sbjct: 12 VQEIGSGQFGLVHLGY-WLNKDKVAIKTIREGAMSEED---FIEEAEVMMKLSHPKLVQL 67
Query: 181 EGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
G+ + + LVF +MEH L+ + F + + G+ + V+
Sbjct: 68 YGVCLEQ--APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 125
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLASF-FDPNHKHPMTSRVVTLWYRPPELLLGATDYGV 298
HRD+ N L+ ++ V+K++DFG+ F D + ++ W P + + Y
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE--VFSFSRYSS 183
Query: 299 GVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKI 331
D+WS G ++ E+ + GK R+ E + I
Sbjct: 184 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 74
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
VI+L S L L DL E + + Q+L + HCHN
Sbjct: 75 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 133
Query: 237 GVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 134 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRYHR 189
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 190 YHGRSAAVWSLGILLYDMVCG 210
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 75
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
VI+L S L L DL E + + Q+L + HCHN
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 134
Query: 237 GVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRYHR 190
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 191 YHGRSAAVWSLGILLYDMVCG 211
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 75
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
VI+L S L L DL E + + Q+L + HCHN
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 134
Query: 237 GVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRYHR 190
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 191 YHGRSAAVWSLGILLYDMVCG 211
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 70
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
VI+L S L L DL E + + Q+L + HCHN
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNX 129
Query: 237 GVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRYHR 185
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 186 YHGRSAAVWSLGILLYDMVCG 206
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 89
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
VI+L S L L DL E + + Q+L + HCHN
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 148
Query: 237 GVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 149 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRYHR 204
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 205 YHGRSAAVWSLGILLYDMVCG 225
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 90
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
VI+L S L L DL E + + Q+L + HCHN
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 149
Query: 237 GVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRYHR 205
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 206 YHGRSAAVWSLGILLYDMVCG 226
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 90
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
VI+L S L L DL E + + Q+L + HCHN
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 149
Query: 237 GVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRYHR 205
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 206 YHGRSAAVWSLGILLYDMVCG 226
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 89
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
VI+L S L L DL E + + Q+L + HCHN
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 148
Query: 237 GVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 149 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRYHR 204
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 205 YHGRSAAVWSLGILLYDMVCG 225
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 75
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
VI+L S L L DL E + + Q+L + HCHN
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 134
Query: 237 GVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRYHR 190
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 191 YHGRSAAVWSLGILLYDMVCG 211
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 90
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
VI+L S L L DL E + + Q+L + HCHN
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 149
Query: 237 GVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRYHR 205
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 206 YHGRSAAVWSLGILLYDMVCG 226
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 73
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
VI+L S L L DL + E + + Q+L + HCHN
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCHNC 132
Query: 237 GVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 133 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRYHR 188
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 189 YHGRSAAVWSLGILLYDMVCG 209
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 109
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
VI+L S L L DL E + + Q+L + HCHN
Sbjct: 110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 168
Query: 237 GVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 169 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRYHR 224
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 225 YHGRSAAVWSLGILLYDMVCG 245
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 102
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
VI+L S L L DL E + + Q+L + HCHN
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 161
Query: 237 GVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRYHR 217
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 218 YHGRSAAVWSLGILLYDMVCG 238
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 103
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
VI+L S L L DL E + + Q+L + HCHN
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 162
Query: 237 GVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRYHR 218
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 219 YHGRSAAVWSLGILLYDMVCG 239
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 70
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
VI+L S L L DL E + + Q+L + HCHN
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 129
Query: 237 GVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRYHR 185
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 186 YHGRSAAVWSLGILLYDMVCG 206
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 97
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
VI+L S L L DL E + + Q+L + HCHN
Sbjct: 98 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 156
Query: 237 GVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 157 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRYHR 212
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 213 YHGRSAAVWSLGILLYDMVCG 233
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 102
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
VI+L S L L DL E + + Q+L + HCHN
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 161
Query: 237 GVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRYHR 217
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 218 YHGRSAAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 103
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
VI+L S L L DL E + + Q+L + HCHN
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 162
Query: 237 GVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRYHR 218
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 219 YHGRSAAVWSLGILLYDMVCG 239
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 70
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
VI+L S L L DL E + + Q+L + HCHN
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 129
Query: 237 GVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRYHR 185
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 186 YHGRSAAVWSLGILLYDMVCG 206
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 11/206 (5%)
Query: 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD 173
+AD E I ++G+G Y V K + + +G+I+A+K++R E + + + +R +D
Sbjct: 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVD 64
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVK---FTEPQVKCYMHQLLSGL 230
P + G + +++ M+ L K E + ++ L
Sbjct: 65 CPFTVTFYGALFRE--GDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKAL 122
Query: 231 EHCHNN-GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPEL 289
EH H+ V+HRD+K SN+LI+ G +K+ DFG++ + + + + Y PE
Sbjct: 123 EHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKP--YMAPER 180
Query: 290 L---LGATDYGVGVDLWSAGCILAEL 312
+ L Y V D+WS G + EL
Sbjct: 181 INPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 103
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
VI+L S L L DL E + + Q+L + HCHN
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 162
Query: 237 GVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRYHR 218
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 219 YHGRSAAVWSLGILLYDMVCG 239
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 117
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
VI+L S L L DL E + + Q+L + HCHN
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 176
Query: 237 GVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRYHR 232
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 233 YHGRSAAVWSLGILLYDMVCG 253
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 117
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
VI+L S L L DL E + + Q+L + HCHN
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 176
Query: 237 GVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRYHR 232
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 233 YHGRSAAVWSLGILLYDMVCG 253
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 103
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
VI+L S L L DL E + + Q+L + HCHN
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 162
Query: 237 GVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRYHR 218
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 219 YHGRSAAVWSLGILLYDMVCG 239
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 23/242 (9%)
Query: 106 ALNGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMARE 165
+ N I + + + +IG G S V++ + +I A+K V + + +++ E
Sbjct: 46 SANECISVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNE 104
Query: 166 ILILRRLDHPN--VIKLEGL-VTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEP-QVKC 221
I L +L + +I+L +T + +Y+V DL K +P + K
Sbjct: 105 IAYLNKLQQHSDKIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKK--KSIDPWERKS 159
Query: 222 YMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMT-SRVV 280
Y +L + H +G++H D+K +N LI DG+LK+ DFG+A+ P+ + S+V
Sbjct: 160 YWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVG 218
Query: 281 TLWYRPPELLLGATD----------YGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLH 329
+ Y PPE + + D+WS GCIL + GK P ++ +LH
Sbjct: 219 AVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 278
Query: 330 KI 331
I
Sbjct: 279 AI 280
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 102
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
VI+L S L L DL E + + Q+L + HCHN
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 161
Query: 237 GVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRYHR 217
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 218 YHGRSAAVWSLGILLYDMVCG 238
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH 174
+D+F + +G+G + VYK + + G +VA+K+++ + + ++F E+ ++ H
Sbjct: 29 SDNFXNKNILGRGGFGKVYKGR-LADGXLVAVKRLKEERTQGGELQFQT-EVEMISMAVH 86
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG--LAASPEVKFTEPQVKCYMHQLLS---- 228
N+++L G + LV+ YM + L PE ++P + Q ++
Sbjct: 87 RNLLRLRGFCMT--PTERLLVYPYMANGSVASCLRERPE---SQPPLDWPKRQRIALGSA 141
Query: 229 -GLEHCHNN---GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWY 284
GL + H++ ++HRD+K +N+L+D++ + DFGLA D H + + +
Sbjct: 142 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGH 201
Query: 285 RPPELLLGATDYGVGVDLWSAGCILAELLAGK 316
PE L D++ G +L EL+ G+
Sbjct: 202 IAPE-YLSTGKSSEKTDVFGYGVMLLELITGQ 232
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 102
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
VI+L S L L DL E + + Q+L + HCHN
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 161
Query: 237 GVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRYHR 217
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 218 YHGRSAAVWSLGILLYDMVCG 238
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE-----PESVKFMAREILILRRLD--HPN 176
+G G + +VY + VA+K V D + P + + E+++L+++
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 122
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNN 236
VI+L S L L DL E + + Q+L + HCHN
Sbjct: 123 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC 181
Query: 237 GVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGAT 294
GVLHRDIK N+LID + G LK+ DFG + D + +RV Y PPE +
Sbjct: 182 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV----YSPPEWIRYHR 237
Query: 295 DYGVGVDLWSAGCILAELLAG 315
+G +WS G +L +++ G
Sbjct: 238 YHGRSAAVWSLGILLYDMVCG 258
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 37/239 (15%)
Query: 124 IGQGTYSNVYKAKDMLTGK-------IVALKKVRFDNLEPESVKFMAREILILRRL-DHP 175
+G+G + V A+ + K VA+K ++ D E E + + E+ +++ + H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-EDLSDLVSEMEMMKMIGKHK 101
Query: 176 NVIKLEGLVTSRMSCSLYLVFHY-----------------MEHDLAGLAASPEVKFTEPQ 218
N+I L G T LY++ Y ME+ + PE + T
Sbjct: 102 NIINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSY-DINRVPEEQMTFKD 158
Query: 219 VKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD--PNHKHPMT 276
+ +QL G+E+ + +HRD+ N+L+ ++ V+KIADFGLA + +K
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 277 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPIMPGRTEVEQLHKIYK 333
R+ W P L Y D+WS G ++ E+ L G P PG VE+L K+ K
Sbjct: 219 GRLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPY-PG-IPVEELFKLLK 273
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 35/238 (14%)
Query: 124 IGQGTYSNVYKAKDMLTGK-------IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+G+G + V A+ + K VA+K ++ D E + ++ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 177 VIKLEGLVTSRMSCSLYLVFHY-----------------MEHDLAGLAASPEVKFTEPQV 219
+I L G T LY++ Y ME+ + PE + T +
Sbjct: 103 IINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSY-DINRVPEEQMTFKDL 159
Query: 220 KCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD--PNHKHPMTS 277
+QL G+E+ + +HRD+ N+L+ ++ V+KIADFGLA + +K+
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 278 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPIMPGRTEVEQLHKIYK 333
R+ W P L Y D+WS G ++ E+ L G P PG VE+L K+ K
Sbjct: 220 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPY-PG-IPVEELFKLLK 273
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 214 FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFF-DPNH 271
E + + Q+L + HCHN GVLHRDIK N+LID + G LK+ DFG + D +
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 213
Query: 272 KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAG 315
+RV Y PPE + +G +WS G +L +++ G
Sbjct: 214 TDFDGTRV----YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD-HPNVIKLEG 182
+ +G ++ VY+A+D+ +G+ ALK++ + E E + + +E+ +++L HPN+++
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCS 93
Query: 183 LVT------SRMSCSLYLVFHYMEHDLAGLAASPEVK--FTEPQVKCYMHQLLSGLEHCH 234
+ L+ + L E + + V +Q ++H H
Sbjct: 94 AASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH 153
Query: 235 NNG--VLHRDIKGSNLLIDDDGVLKIADFGLASFFD--PNHKHPMTSRVV---------T 281
++HRD+K NLL+ + G +K+ DFG A+ P++ R + T
Sbjct: 154 RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTT 213
Query: 282 LWYRPPELLLGATDYGVG--VDLWSAGCIL 309
YR PE++ +++ +G D+W+ GCIL
Sbjct: 214 PMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 137/330 (41%), Gaps = 68/330 (20%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTG-KIVALKKVRFDNLEPESVKFMAREILILRRLD--H 174
+E +D +G+G + V + D G + VA+K V+ + E+ + EI +L L+
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAAR---SEIQVLEHLNTTD 72
Query: 175 PN-----VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVK------FTEPQVKCYM 223
PN V LE C ++ +L GL+ +K F ++
Sbjct: 73 PNSTFRCVQMLEWFEHHGHICIVF--------ELLGLSTYDFIKENGFLPFRLDHIRKMA 124
Query: 224 HQLLSGLEHCHNNGVLHRDIKGSNLLI--------------DDDGVL-----KIADFGLA 264
+Q+ + H+N + H D+K N+L D+ L K+ DFG A
Sbjct: 125 YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA 184
Query: 265 SFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTE 324
++ D +H ++ V T YR PE++L A + D+WS GCIL E G + P
Sbjct: 185 TYDDEHH----STLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS 239
Query: 325 VEQLHKIYKLCG---------SPSEEYWKKSKLP-NATLFKPREPYKRCIQETFKDFPPS 374
E L + ++ G + +Y+ +L + R + C + K+F S
Sbjct: 240 KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRAC--KPLKEFMLS 297
Query: 375 S-------LPLIETLLAIDPAERLTATVAL 397
LI+ +L DPA+R+T AL
Sbjct: 298 QDVEHERLFDLIQKMLEYDPAKRITLREAL 327
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 121 IDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
+ +IG G + V+ L VA+K ++ ++ + E ++ +L HP +++L
Sbjct: 32 VQEIGSGQFGLVHLGY-WLNKDKVAIKTIKEGSMSEDD---FIEEAEVMMKLSHPKLVQL 87
Query: 181 EGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
G+ + + LVF +MEH L+ + F + + G+ + V+
Sbjct: 88 YGVCLEQ--APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 145
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLASF-FDPNHKHPMTSRVVTLWYRPPELLLGATDYGV 298
HRD+ N L+ ++ V+K++DFG+ F D + ++ W P + + Y
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE--VFSFSRYSS 203
Query: 299 GVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKI 331
D+WS G ++ E+ + GK R+ E + I
Sbjct: 204 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 237
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 119/291 (40%), Gaps = 43/291 (14%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREI-LILRRLD 173
D +E + IG G+YS + T A+K + +P EI ++LR
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDP------TEEIEILLRYGQ 74
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
HPN+I L+ + +Y+V + + F+E + + + +E+
Sbjct: 75 HPNIITLKDVYDD--GKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYL 132
Query: 234 HNNGVLHRDIKGSNLL-IDDDG---VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPEL 289
H GV+HRD+K SN+L +D+ G ++I DFG A + + + T + PE
Sbjct: 133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG-LLXTPCYTANFVAPE- 190
Query: 290 LLGATDYGVGVDLWSAGCILAELLAG-KPIM--PGRTEVEQLHKIYKLCGSPSEEYWKKS 346
+L Y D+WS G +L L G P P T E L +I S S YW
Sbjct: 191 VLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWN-- 248
Query: 347 KLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAERLTATVAL 397
+ +T KD L+ L +DP +RLTA + L
Sbjct: 249 ----------------SVSDTAKD-------LVSKXLHVDPHQRLTAALVL 276
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 106/229 (46%), Gaps = 34/229 (14%)
Query: 116 DSFEKIDKIGQGTYSNVYKAK--DMLTGK---IVALKKVRFDNLEPESVKFMAREILILR 170
++ E + IG+G + V++A+ +L + +VA+K ++ + F RE ++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQ-REAALMA 105
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYME-------------HDLAGLA---ASPEVKF 214
D+PN++KL G+ + + L+F YM H + L+ S +
Sbjct: 106 EFDNPNIVKLLGVCA--VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 215 TEP--------QVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA-S 265
+ P + C Q+ +G+ + +HRD+ N L+ ++ V+KIADFGL+ +
Sbjct: 164 SSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 266 FFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+ ++ + + + + PPE + Y D+W+ G +L E+ +
Sbjct: 224 IYSADYYKADGNDAIPIRWMPPESIF-YNRYTTESDVWAYGVVLWEIFS 271
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 103/238 (43%), Gaps = 35/238 (14%)
Query: 124 IGQGTYSNVYKAKDMLTGK-------IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+G+G + V A+ + K VA+K ++ D E + ++ ++ H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 177 VIKLEGLVTSRMSCSLYLVFHY-----------------MEHDLAGLAASPEVKFTEPQV 219
+I L G T LY++ Y ME+ + PE + T +
Sbjct: 149 IINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSY-DINRVPEEQMTFKDL 205
Query: 220 KCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD--PNHKHPMTS 277
+QL G+E+ + +HRD+ N+L+ ++ V+KIADFGLA + +K
Sbjct: 206 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 278 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPIMPGRTEVEQLHKIYK 333
R+ W P L Y D+WS G ++ E+ L G P PG VE+L K+ K
Sbjct: 266 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPY-PG-IPVEELFKLLK 319
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 16/223 (7%)
Query: 121 IDKIGQGTYSNVYKAK-DMLTGKIV--ALKKVRFDNL-EPESVKFMAREILILRRLDHPN 176
++K+G G++ V + + D +GK V A+K ++ D L +PE++ RE+ + LDH N
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 177 VIKLEGLVTS---RMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
+I+L G+V + +M L + ++ + F + Y Q+ G+ +
Sbjct: 83 LIRLYGVVLTPPMKMVTELAPLGSLLDR-----LRKHQGHFLLGTLSRYAVQVAEGMGYL 137
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTS--RVVTLWYRPPELLL 291
+ +HRD+ NLL+ ++KI DFGL N H + R V + PE L
Sbjct: 138 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 197
Query: 292 GATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYK 333
T + D W G L E+ G+ G + LHKI K
Sbjct: 198 TRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 103/238 (43%), Gaps = 35/238 (14%)
Query: 124 IGQGTYSNVYKAKDMLTGK-------IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+G+G + V A+ + K VA+K ++ D E + ++ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 177 VIKLEGLVTSRMSCSLYLVFHY-----------------MEHDLAGLAASPEVKFTEPQV 219
+I L G T LY++ Y ME+ + PE + T +
Sbjct: 103 IITLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSY-DINRVPEEQMTFKDL 159
Query: 220 KCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD--PNHKHPMTS 277
+QL G+E+ + +HRD+ N+L+ ++ V+KIADFGLA + +K
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 278 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPIMPGRTEVEQLHKIYK 333
R+ W P L Y D+WS G ++ E+ L G P PG VE+L K+ K
Sbjct: 220 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPY-PG-IPVEELFKLLK 273
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 104/239 (43%), Gaps = 37/239 (15%)
Query: 124 IGQGTYSNVYKAKDMLTGK-------IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+G+G + V A+ + K VA+K ++ D E + ++ ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 177 VIKLEGLVTSRMSCSLYLVFHY----------MEHDLAGLAAS------PEVKFTEPQVK 220
+I L G T LY++ Y + GL S PE + + +
Sbjct: 96 IINLLGACTQ--DGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH----KHPMT 276
+Q+ G+E+ + +HRD+ N+L+ +D V+KIADFGLA D +H K
Sbjct: 154 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYKKTTN 211
Query: 277 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPIMPGRTEVEQLHKIYK 333
R+ W P L Y D+WS G +L E+ L G P PG VE+L K+ K
Sbjct: 212 GRLPVKWMAPEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSPY-PG-VPVEELFKLLK 266
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 103/238 (43%), Gaps = 35/238 (14%)
Query: 124 IGQGTYSNVYKAKDMLTGK-------IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+G+G + V A+ + K VA+K ++ D E + ++ ++ H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 177 VIKLEGLVTSRMSCSLYLVFHY-----------------MEHDLAGLAASPEVKFTEPQV 219
+I L G T LY++ Y ME+ + PE + T +
Sbjct: 92 IINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSY-DINRVPEEQMTFKDL 148
Query: 220 KCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD--PNHKHPMTS 277
+QL G+E+ + +HRD+ N+L+ ++ V+KIADFGLA + +K
Sbjct: 149 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 278 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPIMPGRTEVEQLHKIYK 333
R+ W P L Y D+WS G ++ E+ L G P PG VE+L K+ K
Sbjct: 209 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPY-PG-IPVEELFKLLK 262
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 103/238 (43%), Gaps = 35/238 (14%)
Query: 124 IGQGTYSNVYKAKDMLTGK-------IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+G+G + V A+ + K VA+K ++ D E + ++ ++ H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 177 VIKLEGLVTSRMSCSLYLVFHY-----------------MEHDLAGLAASPEVKFTEPQV 219
+I L G T LY++ Y ME+ + PE + T +
Sbjct: 90 IINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSY-DINRVPEEQMTFKDL 146
Query: 220 KCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD--PNHKHPMTS 277
+QL G+E+ + +HRD+ N+L+ ++ V+KIADFGLA + +K
Sbjct: 147 VSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 278 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPIMPGRTEVEQLHKIYK 333
R+ W P L Y D+WS G ++ E+ L G P PG VE+L K+ K
Sbjct: 207 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPY-PG-IPVEELFKLLK 260
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 103/238 (43%), Gaps = 35/238 (14%)
Query: 124 IGQGTYSNVYKAKDMLTGK-------IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+G+G + V A+ + K VA+K ++ D E + ++ ++ H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 177 VIKLEGLVTSRMSCSLYLVFHY-----------------MEHDLAGLAASPEVKFTEPQV 219
+I L G T LY++ Y ME+ + PE + T +
Sbjct: 95 IINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSY-DINRVPEEQMTFKDL 151
Query: 220 KCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD--PNHKHPMTS 277
+QL G+E+ + +HRD+ N+L+ ++ V+KIADFGLA + +K
Sbjct: 152 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 278 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPIMPGRTEVEQLHKIYK 333
R+ W P L Y D+WS G ++ E+ L G P PG VE+L K+ K
Sbjct: 212 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPY-PG-IPVEELFKLLK 265
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 16/223 (7%)
Query: 121 IDKIGQGTYSNVYKAK-DMLTGKIV--ALKKVRFDNL-EPESVKFMAREILILRRLDHPN 176
++K+G G++ V + + D +GK V A+K ++ D L +PE++ RE+ + LDH N
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 177 VIKLEGLVTS---RMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
+I+L G+V + +M L + ++ + F + Y Q+ G+ +
Sbjct: 77 LIRLYGVVLTPPMKMVTELAPLGSLLDR-----LRKHQGHFLLGTLSRYAVQVAEGMGYL 131
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTS--RVVTLWYRPPELLL 291
+ +HRD+ NLL+ ++KI DFGL N H + R V + PE L
Sbjct: 132 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 292 GATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYK 333
T + D W G L E+ G+ G + LHKI K
Sbjct: 192 TRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 16/223 (7%)
Query: 121 IDKIGQGTYSNVYKAK-DMLTGKIV--ALKKVRFDNL-EPESVKFMAREILILRRLDHPN 176
++K+G G++ V + + D +GK V A+K ++ D L +PE++ RE+ + LDH N
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 177 VIKLEGLVTS---RMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
+I+L G+V + +M L + ++ + F + Y Q+ G+ +
Sbjct: 73 LIRLYGVVLTPPMKMVTELAPLGSLLDR-----LRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTS--RVVTLWYRPPELLL 291
+ +HRD+ NLL+ ++KI DFGL N H + R V + PE L
Sbjct: 128 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 187
Query: 292 GATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYK 333
T + D W G L E+ G+ G + LHKI K
Sbjct: 188 TRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 103/238 (43%), Gaps = 35/238 (14%)
Query: 124 IGQGTYSNVYKAKDMLTGK-------IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+G+G + V A+ + K VA+K ++ D E + ++ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 177 VIKLEGLVTSRMSCSLYLVFHY-----------------MEHDLAGLAASPEVKFTEPQV 219
+I L G T LY++ Y ME+ + PE + T +
Sbjct: 103 IINLLGACTQ--DGPLYVIVAYASKGNLREYLRARRPPGMEYSY-DINRVPEEQMTFKDL 159
Query: 220 KCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD--PNHKHPMTS 277
+QL G+E+ + +HRD+ N+L+ ++ V+KIADFGLA + +K
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 278 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPIMPGRTEVEQLHKIYK 333
R+ W P L Y D+WS G ++ E+ L G P PG VE+L K+ K
Sbjct: 220 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPY-PG-IPVEELFKLLK 273
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 32/202 (15%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGL 183
+G+G + V KAK K VA+K++ E E F+ E+ L R++HPN++KL G
Sbjct: 17 VGRGAFGVVCKAK--WRAKDVAIKQIES---ESERKAFIV-ELRQLSRVNHPNIVKLYGA 70
Query: 184 VTSRMSC--------SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
+ + SLY V H A P +T + Q G+ + H+
Sbjct: 71 CLNPVCLVMEYAEGGSLYNVLH---------GAEPLPYYTAAHAMSWCLQCSQGVAYLHS 121
Query: 236 ---NGVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLL 291
++HRD+K NLL+ G VLKI DFG A + MT+ + + PE+
Sbjct: 122 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH----MTNNKGSAAWMAPEVFE 177
Query: 292 GATDYGVGVDLWSAGCILAELL 313
G ++Y D++S G IL E++
Sbjct: 178 G-SNYSEKCDVFSWGIILWEVI 198
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 84/203 (41%), Gaps = 46/203 (22%)
Query: 214 FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLI---DDDGVLKIADFGLASFFDPN 270
FTE + M + + ++ H++ + HRD+K NLL + D VLK+ DFG A N
Sbjct: 106 FTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN 165
Query: 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKP---------IMPG 321
+ + T +Y PE +LG Y D+WS G I+ LL G P I PG
Sbjct: 166 ---ALQTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG 221
Query: 322 RTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIET 381
+L + G P+ E+ + S+ + LI
Sbjct: 222 MKRRIRLGQY----GFPNPEWSEVSE--------------------------DAKQLIRL 251
Query: 382 LLAIDPAERLTATVALNSEVIFQ 404
LL DP ERLT T +N I Q
Sbjct: 252 LLKTDPTERLTITQFMNHPWINQ 274
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 32/202 (15%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGL 183
+G+G + V KAK K VA+K++ E E F+ E+ L R++HPN++KL G
Sbjct: 16 VGRGAFGVVCKAK--WRAKDVAIKQIES---ESERKAFIV-ELRQLSRVNHPNIVKLYGA 69
Query: 184 VTSRMSC--------SLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHN 235
+ + SLY V H A P +T + Q G+ + H+
Sbjct: 70 CLNPVCLVMEYAEGGSLYNVLH---------GAEPLPYYTAAHAMSWCLQCSQGVAYLHS 120
Query: 236 ---NGVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLL 291
++HRD+K NLL+ G VLKI DFG A + MT+ + + PE+
Sbjct: 121 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH----MTNNKGSAAWMAPEVFE 176
Query: 292 GATDYGVGVDLWSAGCILAELL 313
G ++Y D++S G IL E++
Sbjct: 177 G-SNYSEKCDVFSWGIILWEVI 197
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 104/240 (43%), Gaps = 39/240 (16%)
Query: 124 IGQGTYSNVYKAKDMLTGK-------IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+G+G + V A+ + K VA+K ++ D E + ++ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 177 VIKLEGLVTSRMSCSLYLVFHY-----------------MEHDLAGLAASPEVKFTEPQV 219
+I L G T LY++ Y ME+ + PE + T +
Sbjct: 103 IINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSY-DINRVPEEQMTFKDL 159
Query: 220 KCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH----KHPM 275
+QL G+E+ + +HRD+ N+L+ ++ V+KIADFGLA D N+ K
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDXXKKTT 217
Query: 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPIMPGRTEVEQLHKIYK 333
R+ W P L Y D+WS G ++ E+ L G P PG VE+L K+ K
Sbjct: 218 NGRLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPY-PG-IPVEELFKLLK 273
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 11/214 (5%)
Query: 121 IDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
+ +IG G + V+ L VA+K +R + E E ++ +L HP +++L
Sbjct: 13 VQEIGSGQFGLVHLGY-WLNKDKVAIKTIREGAMSEED---FIEEAEVMMKLSHPKLVQL 68
Query: 181 EGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
G+ + + LV +MEH L+ + F + + G+ + V+
Sbjct: 69 YGVCLEQ--APICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 126
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLASF-FDPNHKHPMTSRVVTLWYRPPELLLGATDYGV 298
HRD+ N L+ ++ V+K++DFG+ F D + ++ W P + + Y
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE--VFSFSRYSS 184
Query: 299 GVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKI 331
D+WS G ++ E+ + GK R+ E + I
Sbjct: 185 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 218
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 33/206 (16%)
Query: 124 IGQGTYSNVYKAKDMLT---GKIVALKKVRFDNLEPESV--KFMAREILILRRLDHPNVI 178
IG+G + +V++ M VA+K + N +SV KF+ +E L +R+ DHP+++
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK--NCTSDSVREKFL-QEALTMRQFDHPHIV 454
Query: 179 KLEGLVTSR------MSCSL-----YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLL 227
KL G++T C+L +L DLA L Y +QL
Sbjct: 455 KLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLI-------------LYAYQLS 501
Query: 228 SGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ L + + +HRDI N+L+ + +K+ DFGL+ + + + + + + + + P
Sbjct: 502 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 561
Query: 288 ELLLGATDYGVGVDLWSAGCILAELL 313
E + + D+W G + E+L
Sbjct: 562 E-SINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 103/238 (43%), Gaps = 35/238 (14%)
Query: 124 IGQGTYSNVYKAKDMLTGK-------IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+G+G + V A+ + K VA+K ++ D E + ++ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 177 VIKLEGLVTSRMSCSLYLVFHY-----------------MEHDLAGLAASPEVKFTEPQV 219
+I L G T LY++ Y ME+ + PE + T +
Sbjct: 103 IIHLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSY-DINRVPEEQMTFKDL 159
Query: 220 KCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD--PNHKHPMTS 277
+QL G+E+ + +HRD+ N+L+ ++ V+KIADFGLA + +K
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 278 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPIMPGRTEVEQLHKIYK 333
R+ W P L Y D+WS G ++ E+ L G P PG VE+L K+ K
Sbjct: 220 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPY-PG-IPVEELFKLLK 273
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 106/239 (44%), Gaps = 37/239 (15%)
Query: 124 IGQGTYSNVYKAKDMLTGK-------IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+G+G + V A+ + K VA+K ++ D E + ++ ++ H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 177 VIKLEGLVTSRMSCSLYLVFHYM------EHDLA----GLAAS------PEVKFTEPQVK 220
+I L G T LY++ Y E+ A GL S PE + + +
Sbjct: 89 IINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH----KHPMT 276
+Q+ G+E+ + +HRD+ N+L+ +D V+KIADFGLA D +H K
Sbjct: 147 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYKKTTN 204
Query: 277 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPIMPGRTEVEQLHKIYK 333
R+ W P L Y D+WS G +L E+ L G P PG VE+L K+ K
Sbjct: 205 GRLPVKWMAPEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSPY-PG-VPVEELFKLLK 259
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 103/238 (43%), Gaps = 35/238 (14%)
Query: 124 IGQGTYSNVYKAKDMLTGK-------IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+G+G + V A+ + K VA+K ++ D E + ++ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 177 VIKLEGLVTSRMSCSLYLVFHY-----------------MEHDLAGLAASPEVKFTEPQV 219
+I L G T LY++ Y ME+ + PE + T +
Sbjct: 103 IINLLGACTQ--DGPLYVIVGYASKGNLREYLRARRPPGMEYSY-DINRVPEEQMTFKDL 159
Query: 220 KCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD--PNHKHPMTS 277
+QL G+E+ + +HRD+ N+L+ ++ V+KIADFGLA + +K
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 278 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPIMPGRTEVEQLHKIYK 333
R+ W P L Y D+WS G ++ E+ L G P PG VE+L K+ K
Sbjct: 220 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPY-PG-IPVEELFKLLK 273
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 106/239 (44%), Gaps = 37/239 (15%)
Query: 124 IGQGTYSNVYKAKDMLTGK-------IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+G+G + V A+ + K VA+K ++ D E + ++ ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 177 VIKLEGLVTSRMSCSLYLVFHYM------EHDLA----GLAAS------PEVKFTEPQVK 220
+I L G T LY++ Y E+ A GL S PE + + +
Sbjct: 96 IINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH----KHPMT 276
+Q+ G+E+ + +HRD+ N+L+ +D V+KIADFGLA D +H K
Sbjct: 154 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYKKTTN 211
Query: 277 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPIMPGRTEVEQLHKIYK 333
R+ W P L Y D+WS G +L E+ L G P PG VE+L K+ K
Sbjct: 212 GRLPVKWMAPEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSPY-PG-VPVEELFKLLK 266
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 106/239 (44%), Gaps = 37/239 (15%)
Query: 124 IGQGTYSNVYKAKDMLTGK-------IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+G+G + V A+ + K VA+K ++ D E + ++ ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 177 VIKLEGLVTSRMSCSLYLVFHYM------EHDLA----GLAAS------PEVKFTEPQVK 220
+I L G T LY++ Y E+ A GL S PE + + +
Sbjct: 96 IINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH----KHPMT 276
+Q+ G+E+ + +HRD+ N+L+ +D V+KIADFGLA D +H K
Sbjct: 154 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDXXKKTTN 211
Query: 277 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPIMPGRTEVEQLHKIYK 333
R+ W P L Y D+WS G +L E+ L G P PG VE+L K+ K
Sbjct: 212 GRLPVKWMAPEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSPY-PG-VPVEELFKLLK 266
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 106/239 (44%), Gaps = 37/239 (15%)
Query: 124 IGQGTYSNVYKAKDMLTGK-------IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+G+G + V A+ + K VA+K ++ D E + ++ ++ H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 177 VIKLEGLVTSRMSCSLYLVFHYM------EHDLA----GLAAS------PEVKFTEPQVK 220
+I L G T LY++ Y E+ A GL S PE + + +
Sbjct: 88 IINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH----KHPMT 276
+Q+ G+E+ + +HRD+ N+L+ +D V+KIADFGLA D +H K
Sbjct: 146 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYKKTTN 203
Query: 277 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPIMPGRTEVEQLHKIYK 333
R+ W P L Y D+WS G +L E+ L G P PG VE+L K+ K
Sbjct: 204 GRLPVKWMAPEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSPY-PG-VPVEELFKLLK 258
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 106/239 (44%), Gaps = 37/239 (15%)
Query: 124 IGQGTYSNVYKAKDMLTGK-------IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+G+G + V A+ + K VA+K ++ D E + ++ ++ H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 177 VIKLEGLVTSRMSCSLYLVFHYM------EHDLA----GLAAS------PEVKFTEPQVK 220
+I L G T LY++ Y E+ A GL S PE + + +
Sbjct: 85 IINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH----KHPMT 276
+Q+ G+E+ + +HRD+ N+L+ +D V+KIADFGLA D +H K
Sbjct: 143 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYKKTTN 200
Query: 277 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPIMPGRTEVEQLHKIYK 333
R+ W P L Y D+WS G +L E+ L G P PG VE+L K+ K
Sbjct: 201 GRLPVKWMAPEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSPY-PG-VPVEELFKLLK 255
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 141/337 (41%), Gaps = 67/337 (19%)
Query: 110 WIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKI-VALKKVRFDNLEPESVKFMAR-EIL 167
W+ R +E + +G+GT+ V + D G VALK ++ E K AR EI
Sbjct: 30 WLQER---YEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIK----NVEKYKEAARLEIN 82
Query: 168 ILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEH-----DLAGLAASPEVK------FTE 216
+L +++ + + ++ F Y H +L GL+ +K +
Sbjct: 83 VLEKINEKDPD------NKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 136
Query: 217 PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLI---------------DDDGV----LK 257
QV+ QL ++ H+N + H D+K N+L D+ V ++
Sbjct: 137 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVR 196
Query: 258 IADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKP 317
+ DFG A+F +H+H T V T YR PE++L + D+WS GCI+ E G
Sbjct: 197 VVDFGSATF---DHEHHSTI-VSTRHYRAPEVIL-ELGWSQPCDVWSIGCIIFEYYVGFT 251
Query: 318 IMPGRTEVEQLHKIYKLCG---------SPSEEY-------WKKSKLPNATLFKPREPYK 361
+ E L + ++ G + ++Y W ++ + + +P +
Sbjct: 252 LFQTHDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLR 311
Query: 362 RCIQETFKDFPPSSLPLIETLLAIDPAERLTATVALN 398
R + ++ LIE++L +PA+RLT AL
Sbjct: 312 RYLTSEAEEH-HQLFDLIESMLEYEPAKRLTLGEALQ 347
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 16/223 (7%)
Query: 121 IDKIGQGTYSNVYKAK-DMLTGKIV--ALKKVRFDNL-EPESVKFMAREILILRRLDHPN 176
++K+G G++ V + + D +GK V A+K ++ D L +PE++ RE+ + LDH N
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 177 VIKLEGLVTS---RMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
+I+L G+V + +M L + ++ + F + Y Q+ G+ +
Sbjct: 83 LIRLYGVVLTPPMKMVTELAPLGSLLDR-----LRKHQGHFLLGTLSRYAVQVAEGMGYL 137
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTS--RVVTLWYRPPELLL 291
+ +HRD+ NLL+ ++KI DFGL N H + R V + PE L
Sbjct: 138 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 197
Query: 292 GATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYK 333
T + D W G L E+ G+ G + LHKI K
Sbjct: 198 TRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 84/203 (41%), Gaps = 46/203 (22%)
Query: 214 FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLI---DDDGVLKIADFGLASFFDPN 270
FTE + M + + ++ H++ + HRD+K NLL + D VLK+ DFG A N
Sbjct: 125 FTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN 184
Query: 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKP---------IMPG 321
+ + T +Y PE +LG Y D+WS G I+ LL G P I PG
Sbjct: 185 ---ALQTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG 240
Query: 322 RTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIET 381
+L + G P+ E+ + S+ + LI
Sbjct: 241 MKRRIRLGQY----GFPNPEWSEVSE--------------------------DAKQLIRL 270
Query: 382 LLAIDPAERLTATVALNSEVIFQ 404
LL DP ERLT T +N I Q
Sbjct: 271 LLKTDPTERLTITQFMNHPWINQ 293
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 103/238 (43%), Gaps = 35/238 (14%)
Query: 124 IGQGTYSNVYKAKDMLTGK-------IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+G+G + V A+ + K VA+K ++ D E + ++ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 177 VIKLEGLVTSRMSCSLYLVFHY-----------------MEHDLAGLAASPEVKFTEPQV 219
+I L G T LY++ Y ME+ + PE + T +
Sbjct: 103 IINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSY-DINRVPEEQMTFKDL 159
Query: 220 KCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD--PNHKHPMTS 277
+QL G+E+ + +HRD+ N+L+ ++ V++IADFGLA + +K
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 278 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPIMPGRTEVEQLHKIYK 333
R+ W P L Y D+WS G ++ E+ L G P PG VE+L K+ K
Sbjct: 220 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPY-PG-IPVEELFKLLK 273
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 16/223 (7%)
Query: 121 IDKIGQGTYSNVYKAK-DMLTGKIV--ALKKVRFDNL-EPESVKFMAREILILRRLDHPN 176
++K+G G++ V + + D +GK V A+K ++ D L +PE++ RE+ + LDH N
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 177 VIKLEGLVTS---RMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
+I+L G+V + +M L + ++ + F + Y Q+ G+ +
Sbjct: 77 LIRLYGVVLTPPMKMVTELAPLGSLLDR-----LRKHQGHFLLGTLSRYAVQVAEGMGYL 131
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTS--RVVTLWYRPPELLL 291
+ +HRD+ NLL+ ++KI DFGL N H + R V + PE L
Sbjct: 132 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 292 GATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYK 333
T + D W G L E+ G+ G + LHKI K
Sbjct: 192 TRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 106/239 (44%), Gaps = 37/239 (15%)
Query: 124 IGQGTYSNVYKAKDMLTGK-------IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+G+G + V A+ + K VA+K ++ D E + ++ ++ H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 177 VIKLEGLVTSRMSCSLYLVFHYM------EHDLA----GLAAS------PEVKFTEPQVK 220
+I L G T LY++ Y E+ A GL S PE + + +
Sbjct: 137 IINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH----KHPMT 276
+Q+ G+E+ + +HRD+ N+L+ +D V+KIADFGLA D +H K
Sbjct: 195 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYKKTTN 252
Query: 277 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPIMPGRTEVEQLHKIYK 333
R+ W P L Y D+WS G +L E+ L G P PG VE+L K+ K
Sbjct: 253 GRLPVKWMAPEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSPY-PG-VPVEELFKLLK 307
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 16/223 (7%)
Query: 121 IDKIGQGTYSNVYKAK-DMLTGKIV--ALKKVRFDNL-EPESVKFMAREILILRRLDHPN 176
++K+G G++ V + + D +GK V A+K ++ D L +PE++ RE+ + LDH N
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 177 VIKLEGLVTS---RMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
+I+L G+V + +M L + ++ + F + Y Q+ G+ +
Sbjct: 73 LIRLYGVVLTPPMKMVTELAPLGSLLDR-----LRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTS--RVVTLWYRPPELLL 291
+ +HRD+ NLL+ ++KI DFGL N H + R V + PE L
Sbjct: 128 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 292 GATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYK 333
T + D W G L E+ G+ G + LHKI K
Sbjct: 188 TRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 33/206 (16%)
Query: 124 IGQGTYSNVYKAKDMLT---GKIVALKKVRFDNLEPESV--KFMAREILILRRLDHPNVI 178
IG+G + +V++ M VA+K + N +SV KF+ +E L +R+ DHP+++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK--NCTSDSVREKFL-QEALTMRQFDHPHIV 74
Query: 179 KLEGLVTSR------MSCSL-----YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLL 227
KL G++T C+L +L DLA L Y +QL
Sbjct: 75 KLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL-------------YAYQLS 121
Query: 228 SGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ L + + +HRDI N+L+ + +K+ DFGL+ + + + + + + + + P
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 288 ELLLGATDYGVGVDLWSAGCILAELL 313
E + + D+W G + E+L
Sbjct: 182 E-SINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 10/224 (4%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKV-RFDNLEPESVKFMAREILILRRLDH 174
D FE + IG+G +S V K TG++ A+K + ++D L+ V E +L D
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 175 PNVIKLEGLVTSRMSCSLYLVF-HYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
+ +L + LYLV +Y+ DL L + + + Y+ +++ ++
Sbjct: 121 RWITQLH--FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSV 178
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGA 293
H G +HRDIK N+L+D G +++ADFG + V T Y PE+L
Sbjct: 179 HRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAV 238
Query: 294 TDYGVG------VDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 331
D W+ G E+ G+ + E KI
Sbjct: 239 GGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKI 282
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 16/223 (7%)
Query: 121 IDKIGQGTYSNVYKAK-DMLTGKIV--ALKKVRFDNL-EPESVKFMAREILILRRLDHPN 176
++K+G G++ V + + D +GK V A+K ++ D L +PE++ RE+ + LDH N
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 177 VIKLEGLVTS---RMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
+I+L G+V + +M L + ++ + F + Y Q+ G+ +
Sbjct: 73 LIRLYGVVLTPPMKMVTELAPLGSLLDR-----LRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTS--RVVTLWYRPPELLL 291
+ +HRD+ NLL+ ++KI DFGL N H + R V + PE L
Sbjct: 128 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 292 GATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIYK 333
T + D W G L E+ G+ G + LHKI K
Sbjct: 188 TRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 85/173 (49%), Gaps = 9/173 (5%)
Query: 144 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD- 202
VA+K ++ ++ + E ++ L H +++L G+ T + ++++ YM +
Sbjct: 51 VAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQLYGVCTKQRP--IFIITEYMANGC 105
Query: 203 LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFG 262
L +F Q+ + +E+ + LHRD+ N L++D GV+K++DFG
Sbjct: 106 LLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG 165
Query: 263 LASF-FDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
L+ + D + + S+ W PPE+L+ + + D+W+ G ++ E+ +
Sbjct: 166 LSRYVLDDEYTSSVGSKFPVRW-SPPEVLM-YSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 136/330 (41%), Gaps = 68/330 (20%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTG-KIVALKKVRFDNLEPESVKFMAREILILRRLD--H 174
+E +D +G+G + V + D G + VA+K V+ + E+ + EI +L L+
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAAR---SEIQVLEHLNTTD 72
Query: 175 PN-----VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVK------FTEPQVKCYM 223
PN V LE C ++ +L GL+ +K F ++
Sbjct: 73 PNSTFRCVQMLEWFEHHGHICIVF--------ELLGLSTYDFIKENGFLPFRLDHIRKMA 124
Query: 224 HQLLSGLEHCHNNGVLHRDIKGSNLLI--------------DDDGVL-----KIADFGLA 264
+Q+ + H+N + H D+K N+L D+ L K+ DFG A
Sbjct: 125 YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA 184
Query: 265 SFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTE 324
++ D +H ++ V YR PE++L A + D+WS GCIL E G + P
Sbjct: 185 TYDDEHH----STLVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS 239
Query: 325 VEQLHKIYKLCG---------SPSEEYWKKSKLP-NATLFKPREPYKRCIQETFKDFPPS 374
E L + ++ G + +Y+ +L + R + C + K+F S
Sbjct: 240 KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRAC--KPLKEFMLS 297
Query: 375 S-------LPLIETLLAIDPAERLTATVAL 397
LI+ +L DPA+R+T AL
Sbjct: 298 QDVEHERLFDLIQKMLEYDPAKRITLREAL 327
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 33/206 (16%)
Query: 124 IGQGTYSNVYKAKDMLT---GKIVALKKVRFDNLEPESV--KFMAREILILRRLDHPNVI 178
IG+G + +V++ M VA+K + N +SV KF+ +E L +R+ DHP+++
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCK--NCTSDSVREKFL-QEALTMRQFDHPHIV 71
Query: 179 KLEGLVTSR------MSCSL-----YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLL 227
KL G++T C+L +L DLA L Y +QL
Sbjct: 72 KLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL-------------YAYQLS 118
Query: 228 SGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ L + + +HRDI N+L+ + +K+ DFGL+ + + + + + + + + P
Sbjct: 119 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 178
Query: 288 ELLLGATDYGVGVDLWSAGCILAELL 313
E + + D+W G + E+L
Sbjct: 179 E-SINFRRFTSASDVWMFGVCMWEIL 203
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 33/206 (16%)
Query: 124 IGQGTYSNVYKAKDMLT---GKIVALKKVRFDNLEPESV--KFMAREILILRRLDHPNVI 178
IG+G + +V++ M VA+K + N +SV KF+ +E L +R+ DHP+++
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCK--NCTSDSVREKFL-QEALTMRQFDHPHIV 76
Query: 179 KLEGLVTSR------MSCSL-----YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLL 227
KL G++T C+L +L DLA L Y +QL
Sbjct: 77 KLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL-------------YAYQLS 123
Query: 228 SGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ L + + +HRDI N+L+ + +K+ DFGL+ + + + + + + + + P
Sbjct: 124 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 183
Query: 288 ELLLGATDYGVGVDLWSAGCILAELL 313
E + + D+W G + E+L
Sbjct: 184 E-SINFRRFTSASDVWMFGVCMWEIL 208
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 37/239 (15%)
Query: 124 IGQGTYSNVYKAKDMLTGK-------IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+G+G + V A+ + K VA+K ++ D E + ++ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 177 VIKLEGLVTSRMSCSLYLVFHYM------EHDLA----GLAAS------PEVKFTEPQVK 220
+I L G T LY++ Y E+ A G+ S PE + T +
Sbjct: 103 IINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH----KHPMT 276
+QL G+E+ + +HRD+ N+L+ ++ V+KIADFGLA D N+ K
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDXXKKTTN 218
Query: 277 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPIMPGRTEVEQLHKIYK 333
R+ W P L Y D+WS G ++ E+ L G P PG VE+L K+ K
Sbjct: 219 GRLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPY-PG-IPVEELFKLLK 273
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 33/206 (16%)
Query: 124 IGQGTYSNVYKAKDMLT---GKIVALKKVRFDNLEPESV--KFMAREILILRRLDHPNVI 178
IG+G + +V++ M VA+K + N +SV KF+ +E L +R+ DHP+++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK--NCTSDSVREKFL-QEALTMRQFDHPHIV 74
Query: 179 KLEGLVTSR------MSCSL-----YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLL 227
KL G++T C+L +L DLA L Y +QL
Sbjct: 75 KLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLIL-------------YAYQLS 121
Query: 228 SGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ L + + +HRDI N+L+ + +K+ DFGL+ + + + + + + + P
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAP 181
Query: 288 ELLLGATDYGVGVDLWSAGCILAELL 313
E + + D+W G + E+L
Sbjct: 182 E-SINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 85/173 (49%), Gaps = 9/173 (5%)
Query: 144 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD- 202
VA+K ++ ++ + E ++ L H +++L G+ T + ++++ YM +
Sbjct: 35 VAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQLYGVCTKQRP--IFIITEYMANGC 89
Query: 203 LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFG 262
L +F Q+ + +E+ + LHRD+ N L++D GV+K++DFG
Sbjct: 90 LLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG 149
Query: 263 LASF-FDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
L+ + D + + S+ W PPE+L+ + + D+W+ G ++ E+ +
Sbjct: 150 LSRYVLDDEYTSSVGSKFPVRW-SPPEVLM-YSKFSSKSDIWAFGVLMWEIYS 200
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 85/173 (49%), Gaps = 9/173 (5%)
Query: 144 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD- 202
VA+K ++ ++ + E ++ L H +++L G+ T + ++++ YM +
Sbjct: 42 VAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQLYGVCTKQRP--IFIITEYMANGC 96
Query: 203 LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFG 262
L +F Q+ + +E+ + LHRD+ N L++D GV+K++DFG
Sbjct: 97 LLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG 156
Query: 263 LASF-FDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
L+ + D + + S+ W PPE+L+ + + D+W+ G ++ E+ +
Sbjct: 157 LSRYVLDDEYTSSVGSKFPVRW-SPPEVLM-YSKFSSKSDIWAFGVLMWEIYS 207
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 33/206 (16%)
Query: 124 IGQGTYSNVYKAKDMLT---GKIVALKKVRFDNLEPESV--KFMAREILILRRLDHPNVI 178
IG+G + +V++ M VA+K + N +SV KF+ +E L +R+ DHP+++
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCK--NCTSDSVREKFL-QEALTMRQFDHPHIV 77
Query: 179 KLEGLVTSR------MSCSL-----YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLL 227
KL G++T C+L +L DLA L Y +QL
Sbjct: 78 KLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL-------------YAYQLS 124
Query: 228 SGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ L + + +HRDI N+L+ + +K+ DFGL+ + + + + + + + + P
Sbjct: 125 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 184
Query: 288 ELLLGATDYGVGVDLWSAGCILAELL 313
E + + D+W G + E+L
Sbjct: 185 E-SINFRRFTSASDVWMFGVCMWEIL 209
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 107/239 (44%), Gaps = 37/239 (15%)
Query: 124 IGQGTYSNVYKAKDMLTGK-------IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+G+G + V A+ + K VA+K ++ D E + ++ ++ H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 177 VIKLEGLVTSRMSCSLYLVFHYM------EHDLA----GL------AASPEVKFTEPQVK 220
+I L G T LY++ Y E+ A GL + +PE + + +
Sbjct: 81 IINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH----KHPMT 276
+Q+ G+E+ + +HRD+ N+L+ +D V+KIADFGLA D +H K
Sbjct: 139 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYKKTTN 196
Query: 277 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPIMPGRTEVEQLHKIYK 333
R+ W P L Y D+WS G +L E+ L G P PG VE+L K+ K
Sbjct: 197 GRLPVKWMAPEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSPY-PG-VPVEELFKLLK 251
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 85/173 (49%), Gaps = 9/173 (5%)
Query: 144 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD- 202
VA+K ++ ++ + E ++ L H +++L G+ T + ++++ YM +
Sbjct: 31 VAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQLYGVCTKQRP--IFIITEYMANGC 85
Query: 203 LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFG 262
L +F Q+ + +E+ + LHRD+ N L++D GV+K++DFG
Sbjct: 86 LLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG 145
Query: 263 LASF-FDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
L+ + D + + S+ W PPE+L+ + + D+W+ G ++ E+ +
Sbjct: 146 LSRYVLDDEYTSSVGSKFPVRW-SPPEVLM-YSKFSSKSDIWAFGVLMWEIYS 196
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 33/206 (16%)
Query: 124 IGQGTYSNVYKAKDMLT---GKIVALKKVRFDNLEPESV--KFMAREILILRRLDHPNVI 178
IG+G + +V++ M VA+K + N +SV KF+ +E L +R+ DHP+++
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCK--NCTSDSVREKFL-QEALTMRQFDHPHIV 79
Query: 179 KLEGLVTSR------MSCSL-----YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLL 227
KL G++T C+L +L DLA L Y +QL
Sbjct: 80 KLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL-------------YAYQLS 126
Query: 228 SGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ L + + +HRDI N+L+ + +K+ DFGL+ + + + + + + + + P
Sbjct: 127 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 186
Query: 288 ELLLGATDYGVGVDLWSAGCILAELL 313
E + + D+W G + E+L
Sbjct: 187 E-SINFRRFTSASDVWMFGVCMWEIL 211
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 33/206 (16%)
Query: 124 IGQGTYSNVYKAKDMLT---GKIVALKKVRFDNLEPESV--KFMAREILILRRLDHPNVI 178
IG+G + +V++ M VA+K + N +SV KF+ +E L +R+ DHP+++
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCK--NCTSDSVREKFL-QEALTMRQFDHPHIV 102
Query: 179 KLEGLVTSRMS------CSL-----YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLL 227
KL G++T C+L +L DLA L Y +QL
Sbjct: 103 KLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL-------------YAYQLS 149
Query: 228 SGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ L + + +HRDI N+L+ + +K+ DFGL+ + + + + + + + + P
Sbjct: 150 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 209
Query: 288 ELLLGATDYGVGVDLWSAGCILAELL 313
E + + D+W G + E+L
Sbjct: 210 E-SINFRRFTSASDVWMFGVCMWEIL 234
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 85/173 (49%), Gaps = 9/173 (5%)
Query: 144 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD- 202
VA+K ++ ++ + E ++ L H +++L G+ T + ++++ YM +
Sbjct: 36 VAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQLYGVCTKQRP--IFIITEYMANGC 90
Query: 203 LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFG 262
L +F Q+ + +E+ + LHRD+ N L++D GV+K++DFG
Sbjct: 91 LLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG 150
Query: 263 LASF-FDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
L+ + D + + S+ W PPE+L+ + + D+W+ G ++ E+ +
Sbjct: 151 LSRYVLDDEYTSSVGSKFPVRW-SPPEVLM-YSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 21/217 (9%)
Query: 124 IGQGTYSNVYKAKDM-----LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVI 178
+G+G + V +A T + VA+K ++ E M+ +++ H NV+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 179 KLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKF-----------TEPQVKCYMHQLL 227
L G T + +V +L+ S +F T + CY Q+
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 228 SGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLAS--FFDPNHKHPMTSRVVTLWYR 285
G+E + +HRD+ N+L+ + V+KI DFGLA + DP++ +R+ W
Sbjct: 155 KGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 214
Query: 286 PPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG 321
P + Y + D+WS G +L E+ + G PG
Sbjct: 215 PETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPYPG 249
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 33/206 (16%)
Query: 124 IGQGTYSNVYKAKDMLT---GKIVALKKVRFDNLEPESV--KFMAREILILRRLDHPNVI 178
IG+G + +V++ M VA+K + N +SV KF+ +E L +R+ DHP+++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCK--NCTSDSVREKFL-QEALTMRQFDHPHIV 74
Query: 179 KLEGLVTSR------MSCSL-----YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLL 227
KL G++T C+L +L DLA L Y +QL
Sbjct: 75 KLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL-------------YAYQLS 121
Query: 228 SGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ L + + +HRDI N+L+ + +K+ DFGL+ + + + + + + + + P
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 288 ELLLGATDYGVGVDLWSAGCILAELL 313
E + + D+W G + E+L
Sbjct: 182 E-SINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 107/239 (44%), Gaps = 37/239 (15%)
Query: 124 IGQGTYSNVYKAKDMLTGK-------IVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
+G+G + V A+ + K VA+K ++ D E + ++ ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 177 VIKLEGLVTSRMSCSLYLVFHYM------EHDLA----GL------AASPEVKFTEPQVK 220
+I L G T LY++ Y E+ A GL + +PE + + +
Sbjct: 96 IINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNH----KHPMT 276
+Q+ G+E+ + +HRD+ N+L+ +D V+KIADFGLA D +H K
Sbjct: 154 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYKKTTN 211
Query: 277 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPIMPGRTEVEQLHKIYK 333
R+ W P L Y D+WS G +L E+ L G P PG VE+L K+ K
Sbjct: 212 GRLPVKWMAPEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSPY-PG-VPVEELFKLLK 266
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 27/194 (13%)
Query: 214 FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD---DGVLKIADFGLASFFDPN 270
FTE + M + +++ H+ + HRD+K NLL + +LK+ DFG A +
Sbjct: 119 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETT 176
Query: 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHK 330
+ +T+ T +Y PE +LG Y D+WS G I+ LL G P +
Sbjct: 177 SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP---------PFYS 226
Query: 331 IYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAER 390
+ L SP K+++ P + +E LI LL +P +R
Sbjct: 227 NHGLAISPG----MKTRIRMGQYEFPNPEWSEVSEEVKM--------LIRNLLKTEPTQR 274
Query: 391 LTATVALNSEVIFQ 404
+T T +N I Q
Sbjct: 275 MTITEFMNHPWIMQ 288
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 33/206 (16%)
Query: 124 IGQGTYSNVYKAKDMLT---GKIVALKKVRFDNLEPESV--KFMAREILILRRLDHPNVI 178
IG+G + +V++ M VA+K + N +SV KF+ +E L +R+ DHP+++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK--NCTSDSVREKFL-QEALTMRQFDHPHIV 74
Query: 179 KLEGLVTSR------MSCSL-----YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLL 227
KL G++T C+L +L DLA L Y +QL
Sbjct: 75 KLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLIL-------------YAYQLS 121
Query: 228 SGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ L + + +HRDI N+L+ +K+ DFGL+ + + + + + + + + P
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 288 ELLLGATDYGVGVDLWSAGCILAELL 313
E + + D+W G + E+L
Sbjct: 182 E-SINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 27/194 (13%)
Query: 214 FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD---DGVLKIADFGLASFFDPN 270
FTE + M + +++ H+ + HRD+K NLL + +LK+ DFG A +
Sbjct: 120 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETT 177
Query: 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHK 330
+ +T+ T +Y PE +LG Y D+WS G I+ LL G P +
Sbjct: 178 SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP---------PFYS 227
Query: 331 IYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAER 390
+ L SP K+++ P + +E LI LL +P +R
Sbjct: 228 NHGLAISPG----MKTRIRMGQYEFPNPEWSEVSEEVKM--------LIRNLLKTEPTQR 275
Query: 391 LTATVALNSEVIFQ 404
+T T +N I Q
Sbjct: 276 MTITEFMNHPWIMQ 289
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 84/173 (48%), Gaps = 9/173 (5%)
Query: 144 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD- 202
VA+K ++ ++ + E ++ L H +++L G+ T + ++++ YM +
Sbjct: 51 VAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQLYGVCTKQRP--IFIITEYMANGC 105
Query: 203 LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFG 262
L +F Q+ + +E+ + LHRD+ N L++D GV+K++DFG
Sbjct: 106 LLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG 165
Query: 263 LASF-FDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
L+ + D + S+ W PPE+L+ + + D+W+ G ++ E+ +
Sbjct: 166 LSRYVLDDEETSSVGSKFPVRW-SPPEVLM-YSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 27/194 (13%)
Query: 214 FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD---DGVLKIADFGLASFFDPN 270
FTE + M + +++ H+ + HRD+K NLL + +LK+ DFG A +
Sbjct: 118 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETT 175
Query: 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHK 330
+ +T+ T +Y PE +LG Y D+WS G I+ LL G P +
Sbjct: 176 SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP---------PFYS 225
Query: 331 IYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAER 390
+ L SP K+++ P + +E LI LL +P +R
Sbjct: 226 NHGLAISPG----MKTRIRMGQYEFPNPEWSEVSEEVKM--------LIRNLLKTEPTQR 273
Query: 391 LTATVALNSEVIFQ 404
+T T +N I Q
Sbjct: 274 MTITEFMNHPWIMQ 287
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 27/194 (13%)
Query: 214 FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD---DGVLKIADFGLASFFDPN 270
FTE + M + +++ H+ + HRD+K NLL + +LK+ DFG A +
Sbjct: 113 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETT 170
Query: 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHK 330
+ +T+ T +Y PE +LG Y D+WS G I+ LL G P +
Sbjct: 171 SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP---------PFYS 220
Query: 331 IYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAER 390
+ L SP K+++ P + +E LI LL +P +R
Sbjct: 221 NHGLAISPG----MKTRIRMGQYEFPNPEWSEVSEEVKM--------LIRNLLKTEPTQR 268
Query: 391 LTATVALNSEVIFQ 404
+T T +N I Q
Sbjct: 269 MTITEFMNHPWIMQ 282
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 27/194 (13%)
Query: 214 FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD---DGVLKIADFGLASFFDPN 270
FTE + M + +++ H+ + HRD+K NLL + +LK+ DFG A +
Sbjct: 128 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETT 185
Query: 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHK 330
+ +T+ T +Y PE +LG Y D+WS G I+ LL G P +
Sbjct: 186 SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP---------PFYS 235
Query: 331 IYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAER 390
+ L SP K+++ P + +E LI LL +P +R
Sbjct: 236 NHGLAISPG----MKTRIRMGQYEFPNPEWSEVSEEVKM--------LIRNLLKTEPTQR 283
Query: 391 LTATVALNSEVIFQ 404
+T T +N I Q
Sbjct: 284 MTITEFMNHPWIMQ 297
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 27/194 (13%)
Query: 214 FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD---DGVLKIADFGLASFFDPN 270
FTE + M + +++ H+ + HRD+K NLL + +LK+ DFG A +
Sbjct: 158 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETT 215
Query: 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHK 330
+ +T+ T +Y PE +LG Y D+WS G I+ LL G P +
Sbjct: 216 SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP---------PFYS 265
Query: 331 IYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAER 390
+ L SP K+++ P + +E LI LL +P +R
Sbjct: 266 NHGLAISPG----MKTRIRMGQYEFPNPEWSEVSEEVKM--------LIRNLLKTEPTQR 313
Query: 391 LTATVALNSEVIFQ 404
+T T +N I Q
Sbjct: 314 MTITEFMNHPWIMQ 327
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 120/302 (39%), Gaps = 50/302 (16%)
Query: 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD-HPNVIKL 180
D +G+G ++ V +++T + A+K + S F RE+ +L + H NV++L
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVF--REVEMLYQCQGHRNVLEL 76
Query: 181 EGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLH 240
YLVF M F E + + + S L+ HN G+ H
Sbjct: 77 IEFFEEEDR--FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAH 134
Query: 241 RDIKGSNLLIDDDGV---LKIADFGLASFF------DPNHKHPMTSRVVTLWYRPPELLL 291
RD+K N+L + +KI DFGL S P + + + Y PE++
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 292 G----ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347
A+ Y DLWS G IL LL+G P GR CGS W + +
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR------------CGSDCG--WDRGE 240
Query: 348 LPNAT---LFKPREPYKRCIQETFKDFPP--------SSLPLIETLLAIDPAERLTATVA 396
A LF+ IQE +FP ++ LI LL D +RL+A
Sbjct: 241 ACPACQNMLFES-------IQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQV 293
Query: 397 LN 398
L
Sbjct: 294 LQ 295
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 33/206 (16%)
Query: 124 IGQGTYSNVYKAKDMLT---GKIVALKKVRFDNLEPESV--KFMAREILILRRLDHPNVI 178
IG+G + +V++ M VA+K + N +SV KF+ +E L +R+ DHP+++
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK--NCTSDSVREKFL-QEALTMRQFDHPHIV 454
Query: 179 KLEGLVTSR------MSCSL-----YLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLL 227
KL G++T C+L +L DLA L Y +QL
Sbjct: 455 KLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLI-------------LYAYQLS 501
Query: 228 SGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPP 287
+ L + + +HRDI N+L+ +K+ DFGL+ + + + + + + + + P
Sbjct: 502 TALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 561
Query: 288 ELLLGATDYGVGVDLWSAGCILAELL 313
E + + D+W G + E+L
Sbjct: 562 E-SINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 27/194 (13%)
Query: 214 FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD---DGVLKIADFGLASFFDPN 270
FTE + M + +++ H+ + HRD+K NLL + +LK+ DFG A +
Sbjct: 112 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETT 169
Query: 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHK 330
+ +T+ T +Y PE +LG Y D+WS G I+ LL G P +
Sbjct: 170 SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP---------PFYS 219
Query: 331 IYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAER 390
+ L SP K+++ P + +E LI LL +P +R
Sbjct: 220 NHGLAISPG----MKTRIRMGQYEFPNPEWSEVSEEVKM--------LIRNLLKTEPTQR 267
Query: 391 LTATVALNSEVIFQ 404
+T T +N I Q
Sbjct: 268 MTITEFMNHPWIMQ 281
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 27/194 (13%)
Query: 214 FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD---DGVLKIADFGLASFFDPN 270
FTE + M + +++ H+ + HRD+K NLL + +LK+ DFG A +
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETT 171
Query: 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHK 330
+ +T+ T +Y PE +LG Y D+WS G I+ LL G P +
Sbjct: 172 SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP---------PFYS 221
Query: 331 IYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAER 390
+ L SP K+++ P + +E LI LL +P +R
Sbjct: 222 NHGLAISPG----MKTRIRMGQYEFPNPEWSEVSEEVKM--------LIRNLLKTEPTQR 269
Query: 391 LTATVALNSEVIFQ 404
+T T +N I Q
Sbjct: 270 MTITEFMNHPWIMQ 283
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 118/297 (39%), Gaps = 44/297 (14%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD-HPNVIKLEG 182
+G+G Y+ V A + GK A+K + S F RE+ L + + N+++L
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVF--REVETLYQCQGNKNILELIE 78
Query: 183 LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRD 242
YLVF ++ + F E + + + + L+ H G+ HRD
Sbjct: 79 FFED--DTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRD 136
Query: 243 IKGSNLLIDDD---GVLKIADFGLASFFDPNHK-HPMTSRVVTL-----WYRPPELLLGA 293
+K N+L + +KI DF L S N+ P+T+ +T Y PE++
Sbjct: 137 LKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVF 196
Query: 294 TD----YGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSKLP 349
TD Y DLWS G +L +L+G P G + CG W + ++
Sbjct: 197 TDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGAD--------CG------WDRGEVC 242
Query: 350 NATLFKPREPYKRCIQETFKDFP--------PSSLPLIETLLAIDPAERLTATVALN 398
K E IQE +FP + LI LL D +RL+A L
Sbjct: 243 RVCQNKLFES----IQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQ 295
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 27/194 (13%)
Query: 214 FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD---DGVLKIADFGLASFFDPN 270
FTE + M + +++ H+ + HRD+K NLL + +LK+ DFG A +
Sbjct: 164 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETT 221
Query: 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHK 330
+ +T+ T +Y PE +LG Y D+WS G I+ LL G P +
Sbjct: 222 SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP---------PFYS 271
Query: 331 IYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAER 390
+ L SP K+++ P + +E LI LL +P +R
Sbjct: 272 NHGLAISPG----MKTRIRMGQYEFPNPEWSEVSEEVKM--------LIRNLLKTEPTQR 319
Query: 391 LTATVALNSEVIFQ 404
+T T +N I Q
Sbjct: 320 MTITEFMNHPWIMQ 333
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 27/194 (13%)
Query: 214 FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD---DGVLKIADFGLASFFDPN 270
FTE + M + +++ H+ + HRD+K NLL + +LK+ DFG A +
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETT 171
Query: 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHK 330
+ +T+ T +Y PE +LG Y D+WS G I+ LL G P +
Sbjct: 172 SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP---------PFYS 221
Query: 331 IYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAER 390
+ L SP K+++ P + +E LI LL +P +R
Sbjct: 222 NHGLAISPG----MKTRIRMGQYEFPNPEWSEVSEEVKM--------LIRNLLKTEPTQR 269
Query: 391 LTATVALNSEVIFQ 404
+T T +N I Q
Sbjct: 270 MTITEFMNHPWIMQ 283
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 84/173 (48%), Gaps = 9/173 (5%)
Query: 144 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD- 202
VA+K ++ ++ + E ++ L H +++L G+ T + ++++ YM +
Sbjct: 36 VAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQLYGVCTKQRP--IFIITEYMANGC 90
Query: 203 LAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFG 262
L +F Q+ + +E+ + LHRD+ N L++D GV+K++DFG
Sbjct: 91 LLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG 150
Query: 263 LASF-FDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
L+ + D + S+ W PPE+L+ + + D+W+ G ++ E+ +
Sbjct: 151 LSRYVLDDEYTSSRGSKFPVRW-SPPEVLM-YSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 25/221 (11%)
Query: 124 IGQGTYSNVYKAKDM-----LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVI 178
+G+G + V +A T + VA+K ++ E M+ +++ H NV+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 179 KLEGLVTS----RMSCSLYLVFHYM-------EHDLAGLAASPEVKF----TEPQVKCYM 223
L G T M + + F + ++ +PE + T + CY
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 224 HQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLAS--FFDPNHKHPMTSRVVT 281
Q+ G+E + +HRD+ N+L+ + V+KI DFGLA + DP++ +R+
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 282 LWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG 321
W P + Y + D+WS G +L E+ + G PG
Sbjct: 206 KWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 25/221 (11%)
Query: 124 IGQGTYSNVYKAKDM-----LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVI 178
+G+G + V +A T + VA+K ++ E M+ +++ H NV+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 179 KLEG--------LVTSRMSCSLYLVFHYME---HDLAGLAASPEVKF----TEPQVKCYM 223
L G L+ C + Y+ ++ +PE + T + CY
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 224 HQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLAS--FFDPNHKHPMTSRVVT 281
Q+ G+E + +HRD+ N+L+ + V+KI DFGLA + DP++ +R+
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 282 LWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG 321
W P + Y + D+WS G +L E+ + G PG
Sbjct: 206 KWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 25/221 (11%)
Query: 124 IGQGTYSNVYKAKDM-----LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVI 178
+G+G + V +A T + VA+K ++ E M+ +++ H NV+
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 179 KLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK---------------CYM 223
L G T + +V +L+ S +F +V CY
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 224 HQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLAS--FFDPNHKHPMTSRVVT 281
Q+ G+E + +HRD+ N+L+ + V+KI DFGLA + DP++ +R+
Sbjct: 192 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 251
Query: 282 LWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG 321
W P + Y + D+WS G +L E+ + G PG
Sbjct: 252 KWMAPETIF--DRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 25/221 (11%)
Query: 124 IGQGTYSNVYKAKDM-----LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVI 178
+G+G + V +A T + VA+K ++ E M+ +++ H NV+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 179 KLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK---------------CYM 223
L G T + +V +L+ S +F +V CY
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 224 HQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLAS--FFDPNHKHPMTSRVVT 281
Q+ G+E + +HRD+ N+L+ + V+KI DFGLA + DP++ +R+
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 214
Query: 282 LWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG 321
W P + Y + D+WS G +L E+ + G PG
Sbjct: 215 KWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 81/194 (41%), Gaps = 27/194 (13%)
Query: 214 FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD---DGVLKIADFGLASFFDPN 270
FTE + M + +++ H+ + HRD+K NLL + +LK+ DFG A +
Sbjct: 112 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETT 169
Query: 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHK 330
+ +T T +Y PE +LG Y D+WS G I+ LL G P +
Sbjct: 170 SHNSLTEPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP---------PFYS 219
Query: 331 IYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAER 390
+ L SP K+++ P + +E LI LL +P +R
Sbjct: 220 NHGLAISPG----MKTRIRMGQYEFPNPEWSEVSEEVKM--------LIRNLLKTEPTQR 267
Query: 391 LTATVALNSEVIFQ 404
+T T +N I Q
Sbjct: 268 MTITEFMNHPWIMQ 281
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 25/221 (11%)
Query: 124 IGQGTYSNVYKAKDM-----LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVI 178
+G+G + V +A T + VA+K ++ E M+ +++ H NV+
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 179 KLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKF---------------TEPQVKCYM 223
L G T + +V +L+ S +F T + CY
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 224 HQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLAS--FFDPNHKHPMTSRVVT 281
Q+ G+E + +HRD+ N+L+ + V+KI DFGLA + DP++ +R+
Sbjct: 157 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 216
Query: 282 LWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG 321
W P + Y + D+WS G +L E+ + G PG
Sbjct: 217 KWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPYPG 255
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 131/331 (39%), Gaps = 74/331 (22%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
++F I K+G GT+ V + + K A+K VR S K A IL+++ +
Sbjct: 35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEAD---ILKKIQND 91
Query: 176 NV-----IKLEG-LVTSRMSCSLYLVFHYMEHDLAGLAASPEVK-FTEPQVKCYMHQLLS 228
++ +K G + C L+F + L + F +K Y ++L
Sbjct: 92 DINNNNIVKYHGKFMYYDHMC---LIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILK 148
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDD--------------DGV-----------LKIADFGL 263
L + + H D+K N+L+DD DG +K+ DFG
Sbjct: 149 ALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGC 208
Query: 264 ASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRT 323
A+F H + +R YR PE++L + V D+WS GC+LAEL G +
Sbjct: 209 ATFKSDYHGSIINTR----QYRAPEVILNL-GWDVSSDMWSFGCVLAELYTGSLLFRTHE 263
Query: 324 EVEQL------------HKIYKLCGSPSEEYWKKSKLP-----NATLFKPREPYKRCI-- 364
+E L + +Y+ + +Y K +L NA+ + K+C+
Sbjct: 264 HMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPL 323
Query: 365 -----QETFKDFPPSSLPLIETLLAIDPAER 390
E F DF + ++L IDP R
Sbjct: 324 YKIIKHELFCDF-------LYSILQIDPTLR 347
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 25/221 (11%)
Query: 124 IGQGTYSNVYKAKDM-----LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVI 178
+G+G + V +A T + VA+K ++ E M+ +++ H NV+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 179 KLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK---------------CYM 223
L G T + +V +L+ S +F +V CY
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 224 HQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLAS--FFDPNHKHPMTSRVVT 281
Q+ G+E + +HRD+ N+L+ + V+KI DFGLA + DP+ +R+
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPL 214
Query: 282 LWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG 321
W P + Y + D+WS G +L E+ + G PG
Sbjct: 215 KWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 11/206 (5%)
Query: 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD 173
+AD E I ++G+G Y V K + + +G+I A+K++R E + + + R +D
Sbjct: 32 KADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVD 91
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVK---FTEPQVKCYMHQLLSGL 230
P + G + +++ + L K E + ++ L
Sbjct: 92 CPFTVTFYGALFRE--GDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKAL 149
Query: 231 EHCHNN-GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPEL 289
EH H+ V+HRD+K SN+LI+ G +K DFG++ + + + + Y PE
Sbjct: 150 EHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKP--YXAPER 207
Query: 290 L---LGATDYGVGVDLWSAGCILAEL 312
+ L Y V D+WS G EL
Sbjct: 208 INPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 104/236 (44%), Gaps = 29/236 (12%)
Query: 122 DKIGQGTYSNVYKAKDMLTG--KIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVI 178
D IG+G + V KA+ G A+K+++ + + + A E+ +L +L HPN+I
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 179 KLEGLVTSRMSCSLYLVFHY---------------MEHDLA-GLAASPEVKFTEPQVKCY 222
L G R LYL Y +E D A +A S + Q+ +
Sbjct: 80 NLLGACEHR--GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 137
Query: 223 MHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTL 282
+ G+++ +HRD+ N+L+ ++ V KIADFGL+ + K M R+
Sbjct: 138 AADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM-GRLPVR 196
Query: 283 WYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPI--MPGRTEVEQLHKIYKL 334
W L + Y D+WS G +L E+ L G P M E+L + Y+L
Sbjct: 197 WMAIES--LNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL 250
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 127/303 (41%), Gaps = 43/303 (14%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH 174
A + + +IG+G Y V+ K G+ VA+K V F E+ F EI + H
Sbjct: 36 AKQIQMVKQIGKGRYGEVWMGK--WRGEKVAVK-VFFTT--EEASWFRETEIYQTVLMRH 90
Query: 175 PNVIKLEGLVTSRMS-----CSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYM---HQL 226
N++ G + + + LYL+ Y E+ + +K T K + +
Sbjct: 91 ENIL---GFIAADIKGTGSWTQLYLITDYHENG----SLYDYLKSTTLDAKSMLKLAYSS 143
Query: 227 LSGLEHCHNN--------GVLHRDIKGSNLLIDDDGVLKIADFGLASFF--DPNHKH-PM 275
+SGL H H + HRD+K N+L+ +G IAD GLA F D N P
Sbjct: 144 VSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPP 203
Query: 276 TSRVVTLWYRPPELLLGATDYG-----VGVDLWSAGCILAELLAGKPIMPGRTEVEQLHK 330
+RV T Y PPE+L + + + D++S G IL E +A + + G E QL
Sbjct: 204 NTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWE-VARRCVSGGIVEEYQLPY 262
Query: 331 IYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKDFPPSSLPLIETLLAIDPAER 390
+ PS E ++ +P P + E + L+ A +PA R
Sbjct: 263 HDLVPSDPSYE--DMREIVCIKKLRPSFPNRWSSDECLRQMG----KLMTECWAHNPASR 316
Query: 391 LTA 393
LTA
Sbjct: 317 LTA 319
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 20/213 (9%)
Query: 121 IDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
I K+G+G +S V + + G ALK++ E + + RE + R +HPN+++L
Sbjct: 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRL 91
Query: 181 EGLVT----SRMSCSLYLVFH---YMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
++ L L F + +++ L TE Q+ + + GLE
Sbjct: 92 VAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNF-LTEDQILWLLLGICRGLEAI 150
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFG---LASFFDPNHKHPMT-----SRVVTLWYR 285
H G HRD+K +N+L+ D+G + D G A + +T ++ T+ YR
Sbjct: 151 HAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYR 210
Query: 286 PPELLLGATDYGVG--VDLWSAGCILAELLAGK 316
PEL + + D+WS GC+L ++ G+
Sbjct: 211 APELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 104 GEALNGWIPR--RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPE 157
GEA N + R + F+KI +G G + VYK + G KI VA+K++R + P+
Sbjct: 2 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPK 60
Query: 158 SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTE 216
+ K + E ++ +D+P+V +L G+ ++ ++ L+ M L +
Sbjct: 61 ANKEILDEAYVMASVDNPHVCRLLGIC---LTSTVQLIMQLMPFGCLLDYVREHKDNIGS 117
Query: 217 PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HP 274
+ + Q+ G+ + + ++HRD+ N+L+ +KI DFGLA K H
Sbjct: 118 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 177
Query: 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+V W +L Y D+WS G + EL+
Sbjct: 178 EGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 215
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 21/201 (10%)
Query: 124 IGQGTYSNVYKA--KDMLTGKI-VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
+G+G + VY+ + KI VA+K + D KFM+ E +I++ LDHP+++KL
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMS-EAVIMKNLDHPHIVKL 74
Query: 181 EGLVTSRMSCSLYLVF------HYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
G++ + + ++ HY+E + L V Y Q+ + +
Sbjct: 75 IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLV--------LYSLQICKAMAYLE 126
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGA 293
+ +HRDI N+L+ +K+ DFGL+ + D ++ +R+ W P +
Sbjct: 127 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES--INF 184
Query: 294 TDYGVGVDLWSAGCILAELLA 314
+ D+W + E+L+
Sbjct: 185 RRFTTASDVWMFAVCMWEILS 205
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 104/236 (44%), Gaps = 29/236 (12%)
Query: 122 DKIGQGTYSNVYKAKDMLTG--KIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVI 178
D IG+G + V KA+ G A+K+++ + + + A E+ +L +L HPN+I
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 179 KLEGLVTSRMSCSLYLVFHY---------------MEHDLA-GLAASPEVKFTEPQVKCY 222
L G R LYL Y +E D A +A S + Q+ +
Sbjct: 90 NLLGACEHR--GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 147
Query: 223 MHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTL 282
+ G+++ +HRD+ N+L+ ++ V KIADFGL+ + K M R+
Sbjct: 148 AADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM-GRLPVR 206
Query: 283 WYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPI--MPGRTEVEQLHKIYKL 334
W L + Y D+WS G +L E+ L G P M E+L + Y+L
Sbjct: 207 WMAIES--LNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL 260
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 21/201 (10%)
Query: 124 IGQGTYSNVYKA--KDMLTGKI-VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
+G+G + VY+ + KI VA+K + D KFM+ E +I++ LDHP+++KL
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMS-EAVIMKNLDHPHIVKL 90
Query: 181 EGLVTSRMSCSLYLVF------HYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
G++ + + ++ HY+E + L V Y Q+ + +
Sbjct: 91 IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLV--------LYSLQICKAMAYLE 142
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGA 293
+ +HRDI N+L+ +K+ DFGL+ + D ++ +R+ W P +
Sbjct: 143 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES--INF 200
Query: 294 TDYGVGVDLWSAGCILAELLA 314
+ D+W + E+L+
Sbjct: 201 RRFTTASDVWMFAVCMWEILS 221
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 104 GEALNGWIPR--RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPE 157
GEA N + R + F+KI +G G + VYK + G KI VA+K++R + P+
Sbjct: 3 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPK 61
Query: 158 SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTE 216
+ K + E ++ +D+P+V +L G+ ++ ++ L+ M L +
Sbjct: 62 ANKEILDEAYVMASVDNPHVCRLLGIC---LTSTVQLIMQLMPFGCLLDYVREHKDNIGS 118
Query: 217 PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HP 274
+ + Q+ G+ + + ++HRD+ N+L+ +KI DFGLA K H
Sbjct: 119 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 178
Query: 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+V W +L Y D+WS G + EL+
Sbjct: 179 EGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 216
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 104 GEALNGWIPR--RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPE 157
GEA N + R + F+KI +G G + VYK + G KI VA+K++R + P+
Sbjct: 5 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPK 63
Query: 158 SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTE 216
+ K + E ++ +D+P+V +L G+ ++ ++ L+ M L +
Sbjct: 64 ANKEILDEAYVMASVDNPHVCRLLGIC---LTSTVQLIMQLMPFGCLLDYVREHKDNIGS 120
Query: 217 PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HP 274
+ + Q+ G+ + + ++HRD+ N+L+ +KI DFGLA K H
Sbjct: 121 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 180
Query: 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+V W +L Y D+WS G + EL+
Sbjct: 181 EGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 218
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 104 GEALNGWIPR--RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPE 157
GEA N + R + F+KI +G G + VYK + G KI VA+K++R + P+
Sbjct: 2 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPK 60
Query: 158 SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTE 216
+ K + E ++ +D+P+V +L G+ ++ ++ L+ M L +
Sbjct: 61 ANKEILDEAYVMASVDNPHVCRLLGIC---LTSTVQLIMQLMPFGXLLDYVREHKDNIGS 117
Query: 217 PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HP 274
+ + Q+ G+ + + ++HRD+ N+L+ +KI DFGLA K H
Sbjct: 118 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 177
Query: 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+V W +L Y D+WS G + EL+
Sbjct: 178 EGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 215
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 12/100 (12%)
Query: 225 QLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH-----PMTS-- 277
Q+ +E H+ G++HRD+K SN+ D V+K+ DFGL + D + + PM +
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 231
Query: 278 ----RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELL 313
+V T Y PE + G +Y VD++S G IL ELL
Sbjct: 232 THXGQVGTKLYMSPEQIHG-NNYSHKVDIFSLGLILFELL 270
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 113 RRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRL 172
R FE I +G+G + V++AK+ + A+K++R N E K M RE+ L +L
Sbjct: 3 RYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVM-REVKALAKL 61
Query: 173 DHPNVIK 179
+HP +++
Sbjct: 62 EHPGIVR 68
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 32/227 (14%)
Query: 121 IDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
+ IG+G + +V G VA+K ++ D + F+A E ++ +L H N+++L
Sbjct: 17 LQTIGKGEFGDVMLGD--YRGNKVAVKCIKND---ATAQAFLA-EASVMTQLRHSNLVQL 70
Query: 181 EGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK------CYMH---QLLSGLE 231
G++ LY+V YM A V + + + C + + +E
Sbjct: 71 LGVIVEEKG-GLYIVTEYM-------AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 122
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLL 291
+ N +HRD+ N+L+ +D V K++DFGL T ++ W P L
Sbjct: 123 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKLPVKWTAPEALRE 179
Query: 292 GATDYGVGVDLWSAGCILAELLA-GK---PIMPGRTEVEQLHKIYKL 334
A + D+WS G +L E+ + G+ P +P + V ++ K YK+
Sbjct: 180 AA--FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM 224
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 21/201 (10%)
Query: 124 IGQGTYSNVYKA--KDMLTGKI-VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
+G+G + VY+ + KI VA+K + D KFM+ E +I++ LDHP+++KL
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMS-EAVIMKNLDHPHIVKL 78
Query: 181 EGLVTSRMSCSLYLVF------HYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCH 234
G++ + + ++ HY+E + L V Y Q+ + +
Sbjct: 79 IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLV--------LYSLQICKAMAYLE 130
Query: 235 NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGA 293
+ +HRDI N+L+ +K+ DFGL+ + D ++ +R+ W P +
Sbjct: 131 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES--INF 188
Query: 294 TDYGVGVDLWSAGCILAELLA 314
+ D+W + E+L+
Sbjct: 189 RRFTTASDVWMFAVCMWEILS 209
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 104 GEALNGWIPR--RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPE 157
GEA N + R + F+KI +G G + VYK + G KI VA+K++R + P+
Sbjct: 4 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPK 62
Query: 158 SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTE 216
+ K + E ++ +D+P+V +L G+ ++ ++ L+ M L +
Sbjct: 63 ANKEILDEAYVMASVDNPHVCRLLGIC---LTSTVQLIMQLMPFGCLLDYVREHKDNIGS 119
Query: 217 PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HP 274
+ + Q+ G+ + + ++HRD+ N+L+ +KI DFGLA K H
Sbjct: 120 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+V W +L Y D+WS G + EL+
Sbjct: 180 EGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 217
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 104 GEALNGWIPR--RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPE 157
GEA N + R + F+KI +G G + VYK + G KI VA+K++R + P+
Sbjct: 1 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPK 59
Query: 158 SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTE 216
+ K + E ++ +D+P+V +L G+ ++ ++ L+ M L +
Sbjct: 60 ANKEILDEAYVMASVDNPHVCRLLGIC---LTSTVQLIMQLMPFGCLLDYVREHKDNIGS 116
Query: 217 PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HP 274
+ + Q+ G+ + + ++HRD+ N+L+ +KI DFGLA K H
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+V W +L Y D+WS G + EL+
Sbjct: 177 EGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 214
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 122/302 (40%), Gaps = 50/302 (16%)
Query: 122 DKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD-HPNVIKL 180
D +G+G ++ V +++T + A+K + S F RE+ +L + H NV++L
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVF--REVEMLYQCQGHRNVLEL 76
Query: 181 EGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLH 240
YLVF M F E + + + S L+ HN G+ H
Sbjct: 77 IEFFEEEDR--FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAH 134
Query: 241 RDIKGSNLLIDDDGV---LKIADFGLASFFDPNHK-HPMTSRVV-----TLWYRPPELLL 291
RD+K N+L + +KI DF L S N P+++ + + Y PE++
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 292 G----ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEEYWKKSK 347
A+ Y DLWS G IL LL+G P GR CGS W + +
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR------------CGSDCG--WDRGE 240
Query: 348 LPNAT---LFKPREPYKRCIQETFKDFPP--------SSLPLIETLLAIDPAERLTATVA 396
A LF+ IQE +FP ++ LI LL D +RL+A
Sbjct: 241 ACPACQNMLFES-------IQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQV 293
Query: 397 LN 398
L
Sbjct: 294 LQ 295
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 25/221 (11%)
Query: 124 IGQGTYSNVYKAKDM-----LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVI 178
+G+G + V +A T + VA+K ++ E M+ +++ H NV+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 179 KLEG--------LVTSRMSCSLYLVFHYME---HDLAGLAASPEVKF----TEPQVKCYM 223
L G L+ C + Y+ ++ +PE + T + CY
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 224 HQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF--DPNHKHPMTSRVVT 281
Q+ G+E + +HRD+ N+L+ + V+KI DFGLA DP+ +R+
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 282 LWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG 321
W P + Y + D+WS G +L E+ + G PG
Sbjct: 206 KWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 32/219 (14%)
Query: 121 IDKIGQGTYSNVYKAKDMLTG-------KIVALKKVRFDNLEPESVKFMAREILILRRLD 173
++++G+ + VYK L G + VA+K ++ D E + E ++ RL
Sbjct: 14 MEELGEDRFGKVYKGH--LFGPAPGEQTQAVAIKTLK-DKAEGPLREEFRHEAMLRARLQ 70
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEH--------------DLAGLAASPEVK--FTEP 217
HPNV+ L G+VT S+ +F Y H D+ VK P
Sbjct: 71 HPNVVCLLGVVTKDQPLSM--IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 128
Query: 218 QVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGL--ASFFDPNHKHPM 275
+ Q+ +G+E+ ++ V+H+D+ N+L+ D +KI+D GL + +K
Sbjct: 129 DFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 188
Query: 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
S + W P ++ G + + D+WS G +L E+ +
Sbjct: 189 NSLLPIRWMAPEAIMYGK--FSIDSDIWSYGVVLWEVFS 225
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 32/219 (14%)
Query: 121 IDKIGQGTYSNVYKAKDMLTG-------KIVALKKVRFDNLEPESVKFMAREILILRRLD 173
++++G+ + VYK L G + VA+K ++ D E + E ++ RL
Sbjct: 31 MEELGEDRFGKVYKGH--LFGPAPGEQTQAVAIKTLK-DKAEGPLREEFRHEAMLRARLQ 87
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEH--------------DLAGLAASPEVK--FTEP 217
HPNV+ L G+VT S+ +F Y H D+ VK P
Sbjct: 88 HPNVVCLLGVVTKDQPLSM--IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 145
Query: 218 QVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGL--ASFFDPNHKHPM 275
+ Q+ +G+E+ ++ V+H+D+ N+L+ D +KI+D GL + +K
Sbjct: 146 DFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 205
Query: 276 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
S + W P ++ G + + D+WS G +L E+ +
Sbjct: 206 NSLLPIRWMAPEAIMYGK--FSIDSDIWSYGVVLWEVFS 242
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 124 IGQGTYSNVYKAKDM-----LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVI 178
+G+G + V +A T + VA+K ++ E M+ +++ H NV+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 179 KLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK---------------CYM 223
L G T + +V +L+ S +F +V CY
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 224 HQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF--DPNHKHPMTSRVVT 281
Q+ G+E + +HRD+ N+L+ + V+KI DFGLA DP+ +R+
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 282 LWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG 321
W P + Y + D+WS G +L E+ + G PG
Sbjct: 206 KWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 24/220 (10%)
Query: 124 IGQGTYSNVYKAKDM-----LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVI 178
+G+G + V +A T + VA+K ++ E M+ +++ H NV+
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 179 KLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKF--------------TEPQVKCYMH 224
L G T + +V +L+ S +F T + CY
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 225 QLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF--DPNHKHPMTSRVVTL 282
Q+ G+E + +HRD+ N+L+ + V+KI DFGLA DP+ +R+
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 215
Query: 283 WYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG 321
W P + Y + D+WS G +L E+ + G PG
Sbjct: 216 WMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 124 IGQGTYSNVYKAKDM-----LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVI 178
+G+G + V +A T + VA+K ++ E M+ +++ H NV+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 179 KLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK---------------CYM 223
L G T + +V +L+ S +F +V CY
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 224 HQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF--DPNHKHPMTSRVVT 281
Q+ G+E + +HRD+ N+L+ + V+KI DFGLA DP+ +R+
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 282 LWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG 321
W P + Y + D+WS G +L E+ + G PG
Sbjct: 215 KWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 104 GEALNGWIPR--RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPE 157
GEA N + R + F+KI +G G + VYK + G KI VA+K++R + P+
Sbjct: 1 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPK 59
Query: 158 SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTE 216
+ K + E ++ +D+P+V +L G+ ++ ++ L+ M L +
Sbjct: 60 ANKEILDEAYVMASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGS 116
Query: 217 PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HP 274
+ + Q+ G+ + + ++HRD+ N+L+ +KI DFGLA K H
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+V W +L Y D+WS G + EL+
Sbjct: 177 EGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 214
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 104 GEALNGWIPR--RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPE 157
GEA N + R + F+KI +G G + VYK + G KI VA+K++R + P+
Sbjct: 8 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPK 66
Query: 158 SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTE 216
+ K + E ++ +D+P+V +L G+ ++ ++ L+ M L +
Sbjct: 67 ANKEILDEAYVMASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGS 123
Query: 217 PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HP 274
+ + Q+ G+ + + ++HRD+ N+L+ +KI DFGLA K H
Sbjct: 124 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+V W +L Y D+WS G + EL+
Sbjct: 184 EGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 104 GEALNGWIPR--RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPE 157
GEA N + R + F+KI +G G + VYK + G KI VA+K++R + P+
Sbjct: 3 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPK 61
Query: 158 SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTE 216
+ K + E ++ +D+P+V +L G+ ++ ++ L+ M L +
Sbjct: 62 ANKEILDEAYVMASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGS 118
Query: 217 PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HP 274
+ + Q+ G+ + + ++HRD+ N+L+ +KI DFGLA K H
Sbjct: 119 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 178
Query: 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+V W +L Y D+WS G + EL+
Sbjct: 179 EGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 216
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 104 GEALNGWIPR--RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPE 157
GEA N + R + F+KI +G G + VYK + G KI VA+K++R + P+
Sbjct: 26 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPK 84
Query: 158 SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTE 216
+ K + E ++ +D+P+V +L G+ ++ ++ L+ M L +
Sbjct: 85 ANKEILDEAYVMASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGS 141
Query: 217 PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HP 274
+ + Q+ G+ + + ++HRD+ N+L+ +KI DFGLA K H
Sbjct: 142 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 201
Query: 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+V W +L Y D+WS G + EL+
Sbjct: 202 EGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 239
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 104 GEALNGWIPR--RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPE 157
GEA N + R + F+KI +G G + VYK + G KI VA+K++R + P+
Sbjct: 4 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPK 62
Query: 158 SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTE 216
+ K + E ++ +D+P+V +L G+ ++ ++ L+ M L +
Sbjct: 63 ANKEILDEAYVMASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGS 119
Query: 217 PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HP 274
+ + Q+ G+ + + ++HRD+ N+L+ +KI DFGLA K H
Sbjct: 120 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+V W +L Y D+WS G + EL+
Sbjct: 180 EGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 104 GEALNGWIPR--RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPE 157
GEA N + R + F+KI +G G + VYK + G KI VA+K++R + P+
Sbjct: 4 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPK 62
Query: 158 SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTE 216
+ K + E ++ +D+P+V +L G+ ++ ++ L+ M L +
Sbjct: 63 ANKEILDEAYVMASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGS 119
Query: 217 PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HP 274
+ + Q+ G+ + + ++HRD+ N+L+ +KI DFGLA K H
Sbjct: 120 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+V W +L Y D+WS G + EL+
Sbjct: 180 EGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 104 GEALNGWIPR--RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPE 157
GEA N + R + F+KI +G G + VYK + G KI VA+K++R + P+
Sbjct: 1 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPK 59
Query: 158 SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTE 216
+ K + E ++ +D+P+V +L G+ ++ ++ L+ M L +
Sbjct: 60 ANKEILDEAYVMASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGS 116
Query: 217 PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HP 274
+ + Q+ G+ + + ++HRD+ N+L+ +KI DFGLA K H
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+V W +L Y D+WS G + EL+
Sbjct: 177 EGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 214
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 128/337 (37%), Gaps = 49/337 (14%)
Query: 105 EALNGWIPRRADSFEKIDKIGQG--TYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFM 162
+ ++ ++P +E + IG+G V A+ TG+ V ++++ + E V F+
Sbjct: 15 QGMSSFLPE-GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFL 73
Query: 163 AREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAG--LAASPEVKFTEPQVK 220
E+ + + +HPN++ T L++V +M + A + E +
Sbjct: 74 QGELHVSKLFNHPNIVPYRA--TFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIA 131
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD---------PNH 271
+ +L L++ H+ G +HR +K S++LI DG + ++ GL S H
Sbjct: 132 YILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLS--GLRSNLSMISHGQRQRVVH 189
Query: 272 KHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAG----KPIMPGRTEVEQ 327
P S V W P L Y D++S G EL G K + + +E+
Sbjct: 190 DFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEK 249
Query: 328 LHKIY------------KLCGSPSEEYWKKSKLPNATLFKPR--------EPYKRCIQET 367
L+ +L SPS + T PR PY R
Sbjct: 250 LNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPH 309
Query: 368 FKDFPPSSLPLIETLLAIDPAERLTATVALNSEVIFQ 404
F F +E L +P R +A+ LN Q
Sbjct: 310 FHHF-------VEQCLQRNPDARPSASTLLNHSFFKQ 339
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 104 GEALNGWIPR--RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPE 157
GEA N + R + F+KI +G G + VYK + G KI VA+K++R + P+
Sbjct: 1 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPK 59
Query: 158 SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTE 216
+ K + E ++ +D+P+V +L G+ ++ ++ L+ M L +
Sbjct: 60 ANKEILDEAYVMASVDNPHVCRLLGIC---LTSTVQLITQLMPFGXLLDYVREHKDNIGS 116
Query: 217 PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HP 274
+ + Q+ G+ + + ++HRD+ N+L+ +KI DFGLA K H
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+V W +L Y D+WS G + EL+
Sbjct: 177 EGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 214
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 104 GEALNGWIPR--RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPE 157
GEA N + R + F+KI +G G + VYK + G KI VA+K++R + P+
Sbjct: 7 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPK 65
Query: 158 SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTE 216
+ K + E ++ +D+P+V +L G+ ++ ++ L+ M L +
Sbjct: 66 ANKEILDEAYVMASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGS 122
Query: 217 PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HP 274
+ + Q+ G+ + + ++HRD+ N+L+ +KI DFGLA K H
Sbjct: 123 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 182
Query: 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+V W +L Y D+WS G + EL+
Sbjct: 183 EGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 220
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 104 GEALNGWIPR--RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPE 157
GEA N + R + F+KI +G G + VYK + G KI VA+K++R + P+
Sbjct: 4 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPK 62
Query: 158 SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTE 216
+ K + E ++ +D+P+V +L G+ ++ ++ L+ M L +
Sbjct: 63 ANKEILDEAYVMASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGS 119
Query: 217 PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HP 274
+ + Q+ G+ + + ++HRD+ N+L+ +KI DFGLA K H
Sbjct: 120 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+V W +L Y D+WS G + EL+
Sbjct: 180 EGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 217
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLAS--FFDPNHKHPMTSR 278
CY Q+ G+E + +HRD+ N+L+ + V+KI DFGLA + DP++ +R
Sbjct: 195 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 254
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG 321
+ W P + Y + D+WS G +L E+ + G PG
Sbjct: 255 LPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPYPG 296
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLAS--FFDPNHKHPMTSR 278
CY Q+ G+E + +HRD+ N+L+ + V+KI DFGLA + DP++ +R
Sbjct: 202 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 261
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG 321
+ W P + Y + D+WS G +L E+ + G PG
Sbjct: 262 LPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPYPG 303
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLAS--FFDPNHKHPMTSR 278
CY Q+ G+E + +HRD+ N+L+ + V+KI DFGLA + DP++ +R
Sbjct: 197 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG 321
+ W P + Y + D+WS G +L E+ + G PG
Sbjct: 257 LPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPYPG 298
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 221 CYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLAS--FFDPNHKHPMTSR 278
CY Q+ G+E + +HRD+ N+L+ + V+KI DFGLA + DP++ +R
Sbjct: 204 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 263
Query: 279 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG 321
+ W P + Y + D+WS G +L E+ + G PG
Sbjct: 264 LPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPYPG 305
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 121/324 (37%), Gaps = 48/324 (14%)
Query: 118 FEKIDKIGQG--TYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 175
+E + IG+G V A+ TG+ V ++++ + E V F+ E+ + + +HP
Sbjct: 11 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 70
Query: 176 NVIKLEGLVTSRMSCSLYLVFHYMEHDLAG--LAASPEVKFTEPQVKCYMHQLLSGLEHC 233
N++ T L++V +M + A + E + + +L L++
Sbjct: 71 NIVPYRA--TFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYI 128
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD---------PNHKHPMTSRVVTLWY 284
H+ G +HR +K S++LI DG K+ GL S H P S V W
Sbjct: 129 HHMGYVHRSVKASHILISVDG--KVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWL 186
Query: 285 RPPELLLGATDYGVGVDLWSAGCILAELLAG----KPIMPGRTEVEQLHKIY-------- 332
P L Y D++S G EL G K + + +E+L+
Sbjct: 187 SPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTST 246
Query: 333 ----KLCGSPSEEYWKKSKLPNATLFKPR--------EPYKRCIQETFKDFPPSSLPLIE 380
+L SPS + T PR PY R F F +E
Sbjct: 247 IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHF-------VE 299
Query: 381 TLLAIDPAERLTATVALNSEVIFQ 404
L +P R +A+ LN Q
Sbjct: 300 QCLQRNPDARPSASTLLNHSFFKQ 323
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 32/227 (14%)
Query: 121 IDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
+ IG+G + +V G VA+K ++ D + F+A E ++ +L H N+++L
Sbjct: 198 LQTIGKGEFGDVMLGD--YRGNKVAVKCIKND---ATAQAFLA-EASVMTQLRHSNLVQL 251
Query: 181 EGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK------CYMH---QLLSGLE 231
G++ LY+V YM A V + + + C + + +E
Sbjct: 252 LGVIVEEKG-GLYIVTEYM-------AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 303
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLL 291
+ N +HRD+ N+L+ +D V K++DFGL T ++ W P L
Sbjct: 304 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKLPVKWTAPEALR- 359
Query: 292 GATDYGVGVDLWSAGCILAELLA-GK---PIMPGRTEVEQLHKIYKL 334
+ D+WS G +L E+ + G+ P +P + V ++ K YK+
Sbjct: 360 -EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM 405
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 32/227 (14%)
Query: 121 IDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
+ IG+G + +V G VA+K ++ D + F+A E ++ +L H N+++L
Sbjct: 26 LQTIGKGEFGDVMLGD--YRGNKVAVKCIKND---ATAQAFLA-EASVMTQLRHSNLVQL 79
Query: 181 EGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK------CYMH---QLLSGLE 231
G++ LY+V YM A V + + + C + + +E
Sbjct: 80 LGVIVEEKG-GLYIVTEYM-------AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 131
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLL 291
+ N +HRD+ N+L+ +D V K++DFGL T ++ W P L
Sbjct: 132 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKLPVKWTAPEALR- 187
Query: 292 GATDYGVGVDLWSAGCILAELLA-GK---PIMPGRTEVEQLHKIYKL 334
+ D+WS G +L E+ + G+ P +P + V ++ K YK+
Sbjct: 188 -EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM 233
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 21/217 (9%)
Query: 124 IGQGTYSNVYKAKDM-----LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVI 178
+G+G + V +A T + VA+K ++ E M+ +++ H NV+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 179 KLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKF-----------TEPQVKCYMHQLL 227
L G T + +V +L+ S +F T + Y Q+
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 228 SGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLAS--FFDPNHKHPMTSRVVTLWYR 285
G+E + +HRD+ N+L+ + V+KI DFGLA + DP++ +R+ W
Sbjct: 155 KGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMA 214
Query: 286 PPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG 321
P + Y + D+WS G +L E+ + G PG
Sbjct: 215 PETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPYPG 249
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 29/236 (12%)
Query: 122 DKIGQGTYSNVYKAKDMLTG--KIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVI 178
D IG+G + V KA+ G A+K+++ + + + A E+ +L +L HPN+I
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 179 KLEGLVTSRMSCSLYLVFHY---------------MEHDLA-GLAASPEVKFTEPQVKCY 222
L G R LYL Y +E D A +A S + Q+ +
Sbjct: 87 NLLGACEHR--GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 144
Query: 223 MHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTL 282
+ G+++ +HR++ N+L+ ++ V KIADFGL+ + K M R+
Sbjct: 145 AADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTM-GRLPVR 203
Query: 283 WYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPI--MPGRTEVEQLHKIYKL 334
W L + Y D+WS G +L E+ L G P M E+L + Y+L
Sbjct: 204 WMAIES--LNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL 257
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 32/227 (14%)
Query: 121 IDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
+ IG+G + +V G VA+K ++ D + F+A E ++ +L H N+++L
Sbjct: 11 LQTIGKGEFGDVMLGD--YRGNKVAVKCIKND---ATAQAFLA-EASVMTQLRHSNLVQL 64
Query: 181 EGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVK------CYMH---QLLSGLE 231
G++ LY+V YM A V + + + C + + +E
Sbjct: 65 LGVIVEEKG-GLYIVTEYM-------AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 116
Query: 232 HCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLL 291
+ N +HRD+ N+L+ +D V K++DFGL T ++ W P L
Sbjct: 117 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKLPVKWTAPEA--L 171
Query: 292 GATDYGVGVDLWSAGCILAELLA-GK---PIMPGRTEVEQLHKIYKL 334
+ D+WS G +L E+ + G+ P +P + V ++ K YK+
Sbjct: 172 REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM 218
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 117 SFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLD-HP 175
SF D +G G + + M + VA+K++ PE F RE+ +LR D HP
Sbjct: 25 SFCPKDVLGHGAEGTIV-YRGMFDNRDVAVKRIL-----PECFSFADREVQLLRESDEHP 78
Query: 176 NVIKLEGLVTSRMS-------CSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQLLS 228
NVI+ R C+ L + + D A L P + Q S
Sbjct: 79 NVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPIT---------LLQQTTS 129
Query: 229 GLEHCHNNGVLHRDIKGSNLLI---DDDGVLK--IADFGLASFFDPNHKHPMTSRV---V 280
GL H H+ ++HRD+K N+LI + G +K I+DFGL +H + R
Sbjct: 130 GLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG-RHSFSRRSGVPG 188
Query: 281 TLWYRPPELLLG--ATDYGVGVDLWSAGCILAELLA 314
T + PE+L + VD++SAGC+ +++
Sbjct: 189 TEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 21/204 (10%)
Query: 125 GQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLV 184
+G + V+KA+ L + VA+K + + ++ E+ L + H N+++ G
Sbjct: 33 ARGRFGCVWKAQ--LLNEYVAVKIFPIQDKQSWQNEY---EVYSLPGMKHENILQFIGAE 87
Query: 185 T--SRMSCSLYLV--FH-------YMEHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
+ + L+L+ FH +++ ++ + T + Y+H+ + GL+
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDG 147
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMT-SRVVTLWYRPPELLLG 292
H + HRDIK N+L+ ++ IADFGLA F+ T +V T Y PE+L G
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEG 207
Query: 293 ATDYG----VGVDLWSAGCILAEL 312
A ++ + +D+++ G +L EL
Sbjct: 208 AINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 100/245 (40%), Gaps = 26/245 (10%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE----PESVKFMAREI 166
PR F K +G G + V +A GK A+ KV L+ + + + E+
Sbjct: 43 FPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSEL 100
Query: 167 LILRRL-DHPNVIKLEG--------LVTSRMSCSLYLVFHYMEHDLAGLAAS------PE 211
I+ L H N++ L G LV + C L+ GL S PE
Sbjct: 101 KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPE 160
Query: 212 VKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLAS--FFDP 269
+ + + + Q+ G+ + +HRD+ N+L+ + V KI DFGLA D
Sbjct: 161 EQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 220
Query: 270 NHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQL 328
N+ +R+ W P + Y V D+WS G +L E+ + G PG +
Sbjct: 221 NYIVKGNARLPVKWMAPESIF--DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF 278
Query: 329 HKIYK 333
+K+ K
Sbjct: 279 YKLVK 283
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 15/220 (6%)
Query: 104 GEALNGWIPR--RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPE 157
GEA N + R + F+KI +G G + VYK + G KI VA+K++R + P+
Sbjct: 3 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPK 61
Query: 158 SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTE 216
+ K + E ++ +D+P+V +L G+ ++ ++ L+ M L +
Sbjct: 62 ANKEILDEAYVMASVDNPHVCRLLGIC---LTSTVQLIMQLMPFGCLLDYVREHKDNIGS 118
Query: 217 PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HP 274
+ + Q+ G+ + + ++HRD+ N+L+ +KI DFG A K H
Sbjct: 119 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+V W +L Y D+WS G + EL+
Sbjct: 179 EGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 216
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 102/214 (47%), Gaps = 30/214 (14%)
Query: 123 KIGQGTYSNVYKA--------KDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH 174
++G+G + V+ A +D + +VA+K ++ + + K RE +L L H
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKI---LVAVKTLK--DASDNARKDFHREAELLTNLQH 74
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEH-DL----------AGLAA--SPEVKFTEPQVKC 221
+++K G+ L +VF YM+H DL A L A +P + T+ Q+
Sbjct: 75 EHIVKFYGVCVE--GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 222 YMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHKHPMTSRVV 280
Q+ +G+ + + +HRD+ N L+ ++ ++KI DFG++ + ++ ++
Sbjct: 133 IAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTML 192
Query: 281 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+ + PPE ++ + D+WS G +L E+
Sbjct: 193 PIRWMPPESIM-YRKFTTESDVWSLGVVLWEIFT 225
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 15/220 (6%)
Query: 104 GEALNGWIPR--RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPE 157
GEA N + R + F+KI +G G + VYK + G KI VA+K++R + P+
Sbjct: 3 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPK 61
Query: 158 SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTE 216
+ K + E ++ +D+P+V +L G+ ++ ++ L+ M L +
Sbjct: 62 ANKEILDEAYVMASVDNPHVCRLLGIC---LTSTVQLIMQLMPFGCLLDYVREHKDNIGS 118
Query: 217 PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HP 274
+ + Q+ G+ + + ++HRD+ N+L+ +KI DFG A K H
Sbjct: 119 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+V W +L Y D+WS G + EL+
Sbjct: 179 EGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 216
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 15/220 (6%)
Query: 104 GEALNGWIPR--RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPE 157
GEA N + R + F+KI + G + VYK + G KI VA+K++R + P+
Sbjct: 8 GEAPNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPK 66
Query: 158 SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTE 216
+ K + E ++ +D+P+V +L G+ ++ ++ L+ M L +
Sbjct: 67 ANKEILDEAYVMASVDNPHVCRLLGIC---LTSTVQLIMQLMPFGCLLDYVREHKDNIGS 123
Query: 217 PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HP 274
+ + Q+ G+ + + ++HRD+ N+L+ +KI DFGLA K H
Sbjct: 124 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+V W +L Y D+WS G + EL+
Sbjct: 184 EGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 221
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 13/208 (6%)
Query: 114 RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPESVKFMAREILIL 169
+ F+KI +G G + VYK + G KI VA+K++R + P++ K + E ++
Sbjct: 23 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVM 81
Query: 170 RRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLS 228
+D+P+V +L G+ ++ ++ L+ M L + + + Q+
Sbjct: 82 ASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 138
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HPMTSRVVTLWYRP 286
G+ + + ++HRD+ N+L+ +KI DFGLA K H +V W
Sbjct: 139 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 198
Query: 287 PELLLGATDYGVGVDLWSAGCILAELLA 314
+L Y D+WS G + EL+
Sbjct: 199 ESIL--HRIYTHQSDVWSYGVTVWELMT 224
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 33/226 (14%)
Query: 111 IPRRADS-FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESV---KF--MAR 164
+P AD+ E +IG+G + V+K + + +VA+K + + E E+ KF R
Sbjct: 13 LPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQR 72
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSCSLYLV-----FHYMEHDLAGLAASPEVKFTEPQV 219
E+ I+ L+HPN++KL GL+ + + V +H + + S +++
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRL----- 127
Query: 220 KCYMHQLLSGLEHCHNNG--VLHRDIKGSNLL---IDDDGVL--KIADFGLASFFDPNHK 272
M + G+E+ N ++HRD++ N+ +D++ + K+ADFGL+
Sbjct: 128 ---MLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSV 180
Query: 273 HPMTSRVVTLWYRPPELLLGATD--YGVGVDLWSAGCILAELLAGK 316
H ++ + + PE +GA + Y D +S IL +L G+
Sbjct: 181 HSVSGLLGNFQWMAPE-TIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 11/207 (5%)
Query: 114 RADSFEKIDKIGQGTYSNVYKAKDMLTG---KIVALKKVRFDNLEPESVKFMAREILILR 170
+ K+ +G G + V+K + G KI KV D +S + + +L +
Sbjct: 29 KETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIG 88
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKC-YMHQLLSG 229
LDH ++++L GL SL LV Y+ PQ+ + Q+ G
Sbjct: 89 SLDHAHIVRLLGLCPG---SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKG 145
Query: 230 LEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVT--LWYRPP 287
+ + +G++HR++ N+L+ +++ADFG+A P+ K + S T W
Sbjct: 146 MYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 205
Query: 288 ELLLGATDYGVGVDLWSAGCILAELLA 314
+ G Y D+WS G + EL+
Sbjct: 206 SIHFG--KYTHQSDVWSYGVTVWELMT 230
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 11/207 (5%)
Query: 114 RADSFEKIDKIGQGTYSNVYKAKDMLTG---KIVALKKVRFDNLEPESVKFMAREILILR 170
+ K+ +G G + V+K + G KI KV D +S + + +L +
Sbjct: 11 KETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIG 70
Query: 171 RLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKC-YMHQLLSG 229
LDH ++++L GL SL LV Y+ PQ+ + Q+ G
Sbjct: 71 SLDHAHIVRLLGLCPG---SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKG 127
Query: 230 LEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVT--LWYRPP 287
+ + +G++HR++ N+L+ +++ADFG+A P+ K + S T W
Sbjct: 128 MYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 187
Query: 288 ELLLGATDYGVGVDLWSAGCILAELLA 314
+ G Y D+WS G + EL+
Sbjct: 188 SIHFG--KYTHQSDVWSYGVTVWELMT 212
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH 174
++F+ IG G + VYK + G VALK+ ++ + E L R H
Sbjct: 38 TNNFDHKFLIGHGVFGKVYKGV-LRDGAKVALKRRTPESSQGIEEFETEIETLSFCR--H 94
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEH-----DLAGLAASPEVKFTEPQVKCYMHQLLSG 229
P+++ L G R + L++ YME+ L G + P + + Q G
Sbjct: 95 PHLVSLIGFCDER--NEMILIYKYMENGNLKRHLYG-SDLPTMSMSWEQRLEICIGAARG 151
Query: 230 LEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA---SFFDPNHKHPMTSRVVTLWYRP 286
L + H ++HRD+K N+L+D++ V KI DFG++ + D H + TL Y
Sbjct: 152 LHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKG--TLGYID 209
Query: 287 PELLLGATDYGVGVDLWSAGCILAELLAGK 316
PE + D++S G +L E+L +
Sbjct: 210 PEYFIKGR-LTEKSDVYSFGVVLFEVLCAR 238
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 15/220 (6%)
Query: 104 GEALNGWIPR--RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPE 157
GEA N + R + F+KI +G G + VYK + G KI VA+ ++R + P+
Sbjct: 35 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELR-EATSPK 93
Query: 158 SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTE 216
+ K + E ++ +D+P+V +L G+ ++ ++ L+ M L +
Sbjct: 94 ANKEILDEAYVMASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGS 150
Query: 217 PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HP 274
+ + Q+ G+ + + ++HRD+ N+L+ +KI DFGLA K H
Sbjct: 151 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 210
Query: 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+V W +L Y D+WS G + EL+
Sbjct: 211 EGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 248
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 13/208 (6%)
Query: 114 RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPESVKFMAREILIL 169
+ F+KI +G G + VYK + G KI VA+K++R + P++ K + E ++
Sbjct: 10 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVM 68
Query: 170 RRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLS 228
+D+P+V +L G+ ++ ++ L+ M L + + + Q+
Sbjct: 69 ASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAE 125
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HPMTSRVVTLWYRP 286
G+ + + ++HRD+ N+L+ +KI DFGLA K H +V W
Sbjct: 126 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 185
Query: 287 PELLLGATDYGVGVDLWSAGCILAELLA 314
+L Y D+WS G + EL+
Sbjct: 186 ESIL--HRIYTHQSDVWSYGVTVWELMT 211
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 13/208 (6%)
Query: 114 RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPESVKFMAREILIL 169
+ F+KI +G G + VYK + G KI VA+K++R + P++ K + E ++
Sbjct: 7 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVM 65
Query: 170 RRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLS 228
+D+P+V +L G+ ++ ++ L+ M L + + + Q+
Sbjct: 66 ASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 122
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HPMTSRVVTLWYRP 286
G+ + + ++HRD+ N+L+ +KI DFGLA K H +V W
Sbjct: 123 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 182
Query: 287 PELLLGATDYGVGVDLWSAGCILAELLA 314
+L Y D+WS G + EL+
Sbjct: 183 ESIL--HRIYTHQSDVWSYGVTVWELMT 208
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 200 EHDLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIA 259
E D G P T + Y Q+ G+E + +HRD+ N+L+ ++ V+KI
Sbjct: 185 EEDSDGFYKEP---ITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKIC 241
Query: 260 DFGLAS--FFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL--LAG 315
DFGLA + +P++ +R+ W P + Y D+WS G +L E+ L G
Sbjct: 242 DFGLARDIYKNPDYVRKGDTRLPLKWMAPESIF--DKIYSTKSDVWSYGVLLWEIFSLGG 299
Query: 316 KPIMPG 321
P PG
Sbjct: 300 SPY-PG 304
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 15/220 (6%)
Query: 104 GEALNGWIPR--RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPE 157
GEA N + R + F+KI +G G + VYK + G KI VA+K++R + P+
Sbjct: 3 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPK 61
Query: 158 SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTE 216
+ K + E ++ +D+P+V +L G+ ++ ++ L+ M L +
Sbjct: 62 ANKEILDEAYVMASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGS 118
Query: 217 PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HP 274
+ + Q+ G+ + + ++HRD+ N+L+ +KI DFG A K H
Sbjct: 119 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+V W +L Y D+WS G + EL+
Sbjct: 179 EGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 216
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Query: 124 IGQGTYSNVYKAKDMLT-GKIV--ALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
IG+G + VY + GK + A+K + E +F+ E +I++ HPNV+ L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT-EGIIMKDFSHPNVLSL 88
Query: 181 EGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
G + R S +V YM+H DL + T + + Q+ G+++ + +
Sbjct: 89 LG-ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 147
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHK--HPMTSRVVTLWYRPPELLLGATDY 296
HRD+ N ++D+ +K+ADFGLA +D + H T + + + E L +
Sbjct: 148 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE-SLQTQKF 206
Query: 297 GVGVDLWSAGCILAELLA-GKPIMP 320
D+WS G +L EL+ G P P
Sbjct: 207 TTKSDVWSFGVLLWELMTRGAPPYP 231
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Query: 124 IGQGTYSNVYKAKDMLT-GKIV--ALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
IG+G + VY + GK + A+K + E +F+ E +I++ HPNV+ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT-EGIIMKDFSHPNVLSL 96
Query: 181 EGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
G + R S +V YM+H DL + T + + Q+ G+++ + +
Sbjct: 97 LG-ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 155
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHK--HPMTSRVVTLWYRPPELLLGATDY 296
HRD+ N ++D+ +K+ADFGLA +D + H T + + + E L +
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE-SLQTQKF 214
Query: 297 GVGVDLWSAGCILAELLA-GKPIMP 320
D+WS G +L EL+ G P P
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 124 IGQGTYSNVYKAK-DMLTGKIV--ALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
+G+G + +V +A+ G V A+K ++ D + ++ RE ++ DHP+V KL
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 181 EGL-VTSRMSCSL---YLVFHYMEH-DL-AGLAAS--PEVKFTEP--QVKCYMHQLLSGL 230
G+ + SR L ++ +M+H DL A L AS E F P + +M + G+
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 231 EHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLAS--FFDPNHKHPMTSRVVTLWYRPPE 288
E+ + +HRD+ N ++ +D + +ADFGL+ + ++ S++ W
Sbjct: 151 EYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALES 210
Query: 289 LLLGATDYGVGVDLWSAGCILAELL 313
L Y V D+W+ G + E++
Sbjct: 211 --LADNLYTVHSDVWAFGVTMWEIM 233
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 15/220 (6%)
Query: 104 GEALNGWIPR--RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPE 157
GEA N + R + F+KI + G + VYK + G KI VA+K++R + P+
Sbjct: 8 GEAPNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPK 66
Query: 158 SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTE 216
+ K + E ++ +D+P+V +L G+ ++ ++ L+ M L +
Sbjct: 67 ANKEILDEAYVMASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGS 123
Query: 217 PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HP 274
+ + Q+ G+ + + ++HRD+ N+L+ +KI DFGLA K H
Sbjct: 124 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+V W +L Y D+WS G + EL+
Sbjct: 184 EGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 221
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Query: 124 IGQGTYSNVYKAKDMLT-GKIV--ALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
IG+G + VY + GK + A+K + E +F+ E +I++ HPNV+ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT-EGIIMKDFSHPNVLSL 94
Query: 181 EGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
G + R S +V YM+H DL + T + + Q+ G+++ + +
Sbjct: 95 LG-ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 153
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHK--HPMTSRVVTLWYRPPELLLGATDY 296
HRD+ N ++D+ +K+ADFGLA +D + H T + + + E L +
Sbjct: 154 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE-SLQTQKF 212
Query: 297 GVGVDLWSAGCILAELLA-GKPIMP 320
D+WS G +L EL+ G P P
Sbjct: 213 TTKSDVWSFGVLLWELMTRGAPPYP 237
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 15/220 (6%)
Query: 104 GEALNGWIPR--RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPE 157
GEA N + R + F+KI +G G + VYK + G KI VA+K++R + P+
Sbjct: 1 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPK 59
Query: 158 SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTE 216
+ K + E ++ +D+P+V +L G+ ++ ++ L+ M L +
Sbjct: 60 ANKEILDEAYVMASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGS 116
Query: 217 PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HP 274
+ + Q+ G+ + + ++HRD+ N+L+ +KI DFG A K H
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 176
Query: 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+V W +L Y D+WS G + EL+
Sbjct: 177 EGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 214
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 15/220 (6%)
Query: 104 GEALNGWIPR--RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPE 157
GEA N + R + F+KI + G + VYK + G KI VA+K++R + P+
Sbjct: 1 GEAPNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPK 59
Query: 158 SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTE 216
+ K + E ++ +D+P+V +L G+ ++ ++ L+ M L +
Sbjct: 60 ANKEILDEAYVMASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGS 116
Query: 217 PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HP 274
+ + Q+ G+ + + ++HRD+ N+L+ +KI DFGLA K H
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+V W +L Y D+WS G + EL+
Sbjct: 177 EGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 214
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 15/220 (6%)
Query: 104 GEALNGWIPR--RADSFEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPE 157
GEA N + R + F+KI +G G + VYK + G KI VA+K++R + P+
Sbjct: 8 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPK 66
Query: 158 SVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTE 216
+ K + E ++ +D+P+V +L G+ ++ ++ L+ M L +
Sbjct: 67 ANKEILDEAYVMASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGS 123
Query: 217 PQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HP 274
+ + Q+ G+ + + ++HRD+ N+L+ +KI DFG A K H
Sbjct: 124 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 183
Query: 275 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA 314
+V W +L Y D+WS G + EL+
Sbjct: 184 EGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 221
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Query: 124 IGQGTYSNVYKAKDMLT-GKIV--ALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
IG+G + VY + GK + A+K + E +F+ E +I++ HPNV+ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT-EGIIMKDFSHPNVLSL 95
Query: 181 EGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
G + R S +V YM+H DL + T + + Q+ G+++ + +
Sbjct: 96 LG-ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 154
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHK--HPMTSRVVTLWYRPPELLLGATDY 296
HRD+ N ++D+ +K+ADFGLA +D + H T + + + E L +
Sbjct: 155 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE-SLQTQKF 213
Query: 297 GVGVDLWSAGCILAELLA-GKPIMP 320
D+WS G +L EL+ G P P
Sbjct: 214 TTKSDVWSFGVLLWELMTRGAPPYP 238
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Query: 124 IGQGTYSNVYKAKDMLT-GKIV--ALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
IG+G + VY + GK + A+K + E +F+ E +I++ HPNV+ L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT-EGIIMKDFSHPNVLSL 93
Query: 181 EGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
G + R S +V YM+H DL + T + + Q+ G+++ + +
Sbjct: 94 LG-ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 152
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHK--HPMTSRVVTLWYRPPELLLGATDY 296
HRD+ N ++D+ +K+ADFGLA +D + H T + + + E L +
Sbjct: 153 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE-SLQTQKF 211
Query: 297 GVGVDLWSAGCILAELLA-GKPIMP 320
D+WS G +L EL+ G P P
Sbjct: 212 TTKSDVWSFGVLLWELMTRGAPPYP 236
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Query: 124 IGQGTYSNVYKAKDMLT-GKIV--ALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
IG+G + VY + GK + A+K + E +F+ E +I++ HPNV+ L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT-EGIIMKDFSHPNVLSL 115
Query: 181 EGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
G + R S +V YM+H DL + T + + Q+ G+++ + +
Sbjct: 116 LG-ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 174
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHK--HPMTSRVVTLWYRPPELLLGATDY 296
HRD+ N ++D+ +K+ADFGLA +D + H T + + + E L +
Sbjct: 175 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE-SLQTQKF 233
Query: 297 GVGVDLWSAGCILAELLA-GKPIMP 320
D+WS G +L EL+ G P P
Sbjct: 234 TTKSDVWSFGVLLWELMTRGAPPYP 258
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Query: 124 IGQGTYSNVYKAKDMLT-GKIV--ALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
IG+G + VY + GK + A+K + E +F+ E +I++ HPNV+ L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT-EGIIMKDFSHPNVLSL 114
Query: 181 EGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
G+ R S +V YM+H DL + T + + Q+ G+++ + +
Sbjct: 115 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 173
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHK--HPMTSRVVTLWYRPPELLLGATDY 296
HRD+ N ++D+ +K+ADFGLA +D + H T + + + E L +
Sbjct: 174 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE-SLQTQKF 232
Query: 297 GVGVDLWSAGCILAELLA-GKPIMP 320
D+WS G +L EL+ G P P
Sbjct: 233 TTKSDVWSFGVLLWELMTRGAPPYP 257
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Query: 124 IGQGTYSNVYKAKDMLT-GKIV--ALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
IG+G + VY + GK + A+K + E +F+ E +I++ HPNV+ L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT-EGIIMKDFSHPNVLSL 91
Query: 181 EGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
G+ R S +V YM+H DL + T + + Q+ G+++ + +
Sbjct: 92 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 150
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHK--HPMTSRVVTLWYRPPELLLGATDY 296
HRD+ N ++D+ +K+ADFGLA +D + H T + + + E L +
Sbjct: 151 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE-SLQTQKF 209
Query: 297 GVGVDLWSAGCILAELLA-GKPIMP 320
D+WS G +L EL+ G P P
Sbjct: 210 TTKSDVWSFGVLLWELMTRGAPPYP 234
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Query: 124 IGQGTYSNVYKAKDMLT-GKIV--ALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
IG+G + VY + GK + A+K + E +F+ E +I++ HPNV+ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT-EGIIMKDFSHPNVLSL 96
Query: 181 EGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
G+ R S +V YM+H DL + T + + Q+ G+++ + +
Sbjct: 97 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 155
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHK--HPMTSRVVTLWYRPPELLLGATDY 296
HRD+ N ++D+ +K+ADFGLA +D + H T + + + E L +
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE-SLQTQKF 214
Query: 297 GVGVDLWSAGCILAELLA-GKPIMP 320
D+WS G +L EL+ G P P
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 108 NGWIPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREIL 167
+G +PR S + ++ +G + V+KA+ L VA+K + + + REI
Sbjct: 9 SGLVPR--GSLQLLEIKARGRFGCVWKAQ--LMNDFVAVKIFPLQDKQSWQSE---REIF 61
Query: 168 ILRRLDHPNVIKLEGLVT--SRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCYMHQ 225
+ H N+++ S + L+L+ + HD L + C++ +
Sbjct: 62 STPGMKHENLLQFIAAEKRGSNLEVELWLITAF--HDKGSLTDYLKGNIITWNELCHVAE 119
Query: 226 LLS-GLEHCHNN-----------GVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH 273
+S GL + H + + HRD K N+L+ D +ADFGLA F+P
Sbjct: 120 TMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPP 179
Query: 274 PMT-SRVVTLWYRPPELLLGATDYG----VGVDLWSAGCILAELLA 314
T +V T Y PE+L GA ++ + +D+++ G +L EL++
Sbjct: 180 GDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 8/194 (4%)
Query: 131 NVYKAKDMLTGKIVALKKVRFDNLEPESV--KFMAREILILRRLDHPNVIKLEGLVTSRM 188
+VY+A+D + +IVALK + + L + V RE RL P+V+ + +
Sbjct: 49 DVYEAEDTVRERIVALK-LXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDF--GEI 105
Query: 189 SCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSN 247
LY+ + DLA + P+ + Q+ S L+ H G HRD+K N
Sbjct: 106 DGQLYVDXRLINGVDLAAXLRR-QGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPEN 164
Query: 248 LLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGC 307
+L+ D + DFG+AS + + V TL+Y PE + D+++ C
Sbjct: 165 ILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPE-RFSESHATYRADIYALTC 223
Query: 308 ILAELLAGKPIMPG 321
+L E L G P G
Sbjct: 224 VLYECLTGSPPYQG 237
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH 174
++F+ IG G + VYK + G VALK+ ++ + E L R H
Sbjct: 38 TNNFDHKFLIGHGVFGKVYKGV-LRDGAKVALKRRTPESSQGIEEFETEIETLSFCR--H 94
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEH-----DLAGLAASPEVKFTEPQVKCYMHQLLSG 229
P+++ L G R + L++ YME+ L G + P + + Q G
Sbjct: 95 PHLVSLIGFCDER--NEMILIYKYMENGNLKRHLYG-SDLPTMSMSWEQRLEICIGAARG 151
Query: 230 LEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHKHPMTSRVVTLWYRPPE 288
L + H ++HRD+K N+L+D++ V KI DFG++ + H TL Y PE
Sbjct: 152 LHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPE 211
Query: 289 LLLGATDYGVGVDLWSAGCILAELLAGK 316
+ D++S G +L E+L +
Sbjct: 212 YFIKGR-LTEKSDVYSFGVVLFEVLCAR 238
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 11/205 (5%)
Query: 124 IGQGTYSNVYKAKDMLT-GKIV--ALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
IG+G + VY + GK + A+K + E +F+ E +I++ HPNV+ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT-EGIIMKDFSHPNVLSL 95
Query: 181 EGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
G+ R S +V YM+H DL + T + + Q+ G+++ + +
Sbjct: 96 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 154
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHK--HPMTSRVVTLWYRPPELLLGATDY 296
HRD+ N ++D+ +K+ADFGLA +D H T + + + E L +
Sbjct: 155 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALE-SLQTQKF 213
Query: 297 GVGVDLWSAGCILAELLA-GKPIMP 320
D+WS G +L EL+ G P P
Sbjct: 214 TTKSDVWSFGVLLWELMTRGAPPYP 238
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTG---KI-VALKKVRFDNLEPESVKFMAREILILRRLD 173
F+KI +G G + VYK + G KI VA+K++R + P++ K + E ++ +D
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVD 79
Query: 174 HPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEH 232
+P+V +L G+ ++ ++ L+ M L + + + Q+ G+ +
Sbjct: 80 NPHVCRLLGIC---LTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 233 CHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HPMTSRVVTLWYRPPELL 290
+ ++HRD+ N+L+ +KI DFG A K H +V W +L
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 291 LGATDYGVGVDLWSAGCILAELLA 314
Y D+WS G + EL+
Sbjct: 197 --HRIYTHQSDVWSYGVTVWELMT 218
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 101/231 (43%), Gaps = 39/231 (16%)
Query: 124 IGQGTYSNVYKAKDM-LTGK----IVALKKVRFDNLEPESVKFMAREILILRRLDHPNVI 178
+G+G + V KA L G+ VA+K ++ +N P ++ + E +L++++HP+VI
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-ENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 179 KLEGLVTSRMSCSLYLVFHYMEH-DLAG-----------------------LAASPEVKF 214
KL G + L L+ Y ++ L G L E
Sbjct: 90 KLYGACSQ--DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 215 TEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLAS--FFDPNHK 272
T + + Q+ G+++ ++HRD+ N+L+ + +KI+DFGL+ + + ++
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 273 HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPIMPG 321
R+ W L Y D+WS G +L E+ L G P PG
Sbjct: 208 KRSQGRIPVKWMAIESLF--DHIYTTQSDVWSFGVLLWEIVTLGGNPY-PG 255
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 214 FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDD---DGVLKIADFGLASFFDPN 270
FTE + + +++ H+ + HRD+K NLL + +LK+ DFG A +
Sbjct: 158 FTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETT 215
Query: 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKP 317
+ +T+ T +Y PE +LG Y D WS G I LL G P
Sbjct: 216 SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDXWSLGVIXYILLCGYP 261
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 90/219 (41%), Gaps = 23/219 (10%)
Query: 124 IGQGTYSNVYKAKDM-----LTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVI 178
+G+G + V +A T + VA+K ++ E M+ +++ H NV+
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 179 KLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKF-------------TEPQVKCYMHQ 225
L G T + +V +L+ S +F T + Y Q
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 226 LLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF--DPNHKHPMTSRVVTLW 283
+ G+E + +HRD+ N+L+ + V+KI DFGLA DP+ +R+ W
Sbjct: 157 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKW 216
Query: 284 YRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPG 321
P + Y + D+WS G +L E+ + G PG
Sbjct: 217 MAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 106/226 (46%), Gaps = 33/226 (14%)
Query: 111 IPRRADS-FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESV---KF--MAR 164
+P AD+ E +IG+G + V+K + + +VA+K + + E E+ KF R
Sbjct: 13 LPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQR 72
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSCSLYLV-----FHYMEHDLAGLAASPEVKFTEPQV 219
E+ I+ L+HPN++KL GL+ + + V +H + + S +++
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRL----- 127
Query: 220 KCYMHQLLSGLEHCHNNG--VLHRDIKGSNLL---IDDDGVL--KIADFGLASFFDPNHK 272
M + G+E+ N ++HRD++ N+ +D++ + K+ADFG +
Sbjct: 128 ---MLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSV 180
Query: 273 HPMTSRVVTLWYRPPELLLGATD--YGVGVDLWSAGCILAELLAGK 316
H ++ + + PE +GA + Y D +S IL +L G+
Sbjct: 181 HSVSGLLGNFQWMAPE-TIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 9/164 (5%)
Query: 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALK---KVRFDNLEPES-VKFMAREILIL 169
+ +++ +G G + VYK + G+ V + K+ + P++ V+FM E LI+
Sbjct: 36 KETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMD-EALIM 94
Query: 170 RRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLS 228
+DHP++++L G+ +S ++ LV M H L + + + Q+
Sbjct: 95 ASMDHPHLVRLLGVC---LSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAK 151
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK 272
G+ + ++HRD+ N+L+ +KI DFGLA + + K
Sbjct: 152 GMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 195
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 124 IGQGTYSNVYKAKDMLT-GKIV--ALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
IG+G + VY + GK + A+K + E +F+ E +I++ HPNV+ L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT-EGIIMKDFSHPNVLSL 155
Query: 181 EGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
G+ R S +V YM+H DL + T + + Q+ G++ + +
Sbjct: 156 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 214
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLA-----SFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
HRD+ N ++D+ +K+ADFGLA FD H + +++ W L
Sbjct: 215 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH-NKTGAKLPVKWMALES--LQTQ 271
Query: 295 DYGVGVDLWSAGCILAELLA-GKPIMP 320
+ D+WS G +L EL+ G P P
Sbjct: 272 KFTTKSDVWSFGVLLWELMTRGAPPYP 298
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 123/292 (42%), Gaps = 47/292 (16%)
Query: 116 DSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFM-AREILILRRLDH 174
D+ + ++ IG+G Y VYK L + VA+K F N + F+ + I + ++H
Sbjct: 13 DNLKLLELIGRGRYGAVYKGS--LDERPVAVKVFSFANRQ----NFINEKNIYRVPLMEH 66
Query: 175 PNVIKL---EGLVTS--RMSCSLYLVFH-------YMEHDLAGLAASPEVKFTEPQVKCY 222
N+ + + VT+ RM L + ++ Y+ + +S + + + Y
Sbjct: 67 DNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAY 126
Query: 223 MHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN-------HKHPM 275
+H L +H + + HRD+ N+L+ +DG I+DFGL+ N +
Sbjct: 127 LHTELPRGDH-YKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAA 185
Query: 276 TSRVVTLWYRPPELLLGATD-------------YGVGVDLWSAGCILAELLAGKPI---- 318
S V T+ Y PE+L GA + Y +G+ W +L G+ +
Sbjct: 186 ISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ 245
Query: 319 MPGRTEVEQLHKIYKLCGSPSEEYWKKSKLPNATLFKPREPYKRCIQETFKD 370
M +TEV H ++ ++ K P A +K R ++ET +D
Sbjct: 246 MAFQTEVGN-HPTFEDMQVLVSREKQRPKFPEA--WKENSLAVRSLKETIED 294
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 39/231 (16%)
Query: 124 IGQGTYSNVYKAKDM-LTGK----IVALKKVRFDNLEPESVKFMAREILILRRLDHPNVI 178
+G+G + V KA L G+ VA+K ++ +N P ++ + E +L++++HP+VI
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-ENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 179 KLEGLVTSRMSCSLYLVFHYMEH-DLAG-----------------------LAASPEVKF 214
KL G + L L+ Y ++ L G L E
Sbjct: 90 KLYGACSQ--DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 215 TEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLAS--FFDPNHK 272
T + + Q+ G+++ ++HRD+ N+L+ + +KI+DFGL+ + + +
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 273 HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPIMPG 321
R+ W L Y D+WS G +L E+ L G P PG
Sbjct: 208 KRSQGRIPVKWMAIESLF--DHIYTTQSDVWSFGVLLWEIVTLGGNPY-PG 255
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 106/226 (46%), Gaps = 33/226 (14%)
Query: 111 IPRRADS-FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESV---KF--MAR 164
+P AD+ E +IG+G + V+K + + +VA+K + + E E+ KF R
Sbjct: 13 LPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQR 72
Query: 165 EILILRRLDHPNVIKLEGLVTSRMSCSLYLV-----FHYMEHDLAGLAASPEVKFTEPQV 219
E+ I+ L+HPN++KL GL+ + + V +H + + S +++
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRL----- 127
Query: 220 KCYMHQLLSGLEHCHNNG--VLHRDIKGSNLL---IDDDGVL--KIADFGLASFFDPNHK 272
M + G+E+ N ++HRD++ N+ +D++ + K+ADF L+
Sbjct: 128 ---MLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSV 180
Query: 273 HPMTSRVVTLWYRPPELLLGATD--YGVGVDLWSAGCILAELLAGK 316
H ++ + + PE +GA + Y D +S IL +L G+
Sbjct: 181 HSVSGLLGNFQWMAPE-TIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 90/212 (42%), Gaps = 34/212 (16%)
Query: 124 IGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGL 183
+G+G Y V++ G+ VA V+ + E F E+ L H N++ G
Sbjct: 16 VGKGRYGEVWRGS--WQGENVA---VKIFSSRDEKSWFRETELYNTVMLRHENIL---GF 67
Query: 184 VTSRM-----SCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCY--MHQLLSGLEHCH-- 234
+ S M S L+L+ HY H++ L ++ T V C + + SGL H H
Sbjct: 68 IASDMTSRHSSTQLWLITHY--HEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIE 124
Query: 235 ------NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH---PMTSRVVTLWYR 285
+ HRD+K N+L+ +G IAD GLA + RV T Y
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 286 PPELL-----LGATDYGVGVDLWSAGCILAEL 312
PE+L + D VD+W+ G +L E+
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 124 IGQGTYSNVYKAKDMLT-GKIV--ALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
IG+G + VY + GK + A+K + E +F+ E +I++ HPNV+ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT-EGIIMKDFSHPNVLSL 97
Query: 181 EGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
G+ R S +V YM+H DL + T + + Q+ G++ + +
Sbjct: 98 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 156
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLA-----SFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
HRD+ N ++D+ +K+ADFGLA FD H + +++ W L
Sbjct: 157 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH-NKTGAKLPVKWMALES--LQTQ 213
Query: 295 DYGVGVDLWSAGCILAELLA-GKPIMP 320
+ D+WS G +L EL+ G P P
Sbjct: 214 KFTTKSDVWSFGVLLWELMTRGAPPYP 240
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 124 IGQGTYSNVYKAKDMLT-GKIV--ALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
IG+G + VY + GK + A+K + E +F+ E +I++ HPNV+ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT-EGIIMKDFSHPNVLSL 97
Query: 181 EGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
G+ R S +V YM+H DL + T + + Q+ G++ + +
Sbjct: 98 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 156
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLA-----SFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
HRD+ N ++D+ +K+ADFGLA FD H + +++ W L
Sbjct: 157 HRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVH-NKTGAKLPVKWMALES--LQTQ 213
Query: 295 DYGVGVDLWSAGCILAELLA-GKPIMP 320
+ D+WS G +L EL+ G P P
Sbjct: 214 KFTTKSDVWSFGVLLWELMTRGAPPYP 240
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 124 IGQGTYSNVYKAKDMLT-GKIV--ALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
IG+G + VY + GK + A+K + E +F+ E +I++ HPNV+ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT-EGIIMKDFSHPNVLSL 96
Query: 181 EGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
G+ R S +V YM+H DL + T + + Q+ G++ + +
Sbjct: 97 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 155
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLA-----SFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
HRD+ N ++D+ +K+ADFGLA FD H + +++ W L
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH-NKTGAKLPVKWMALES--LQTQ 212
Query: 295 DYGVGVDLWSAGCILAELLA-GKPIMP 320
+ D+WS G +L EL+ G P P
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 124 IGQGTYSNVYKAKDMLT-GKIV--ALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
IG+G + VY + GK + A+K + E +F+ E +I++ HPNV+ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT-EGIIMKDFSHPNVLSL 94
Query: 181 EGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
G + R S +V YM+H DL + T + + Q+ G++ + +
Sbjct: 95 LG-ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 153
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLA-----SFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
HRD+ N ++D+ +K+ADFGLA FD H + +++ W L
Sbjct: 154 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH-NKTGAKLPVKWMALES--LQTQ 210
Query: 295 DYGVGVDLWSAGCILAELLA-GKPIMP 320
+ D+WS G +L EL+ G P P
Sbjct: 211 KFTTKSDVWSFGVLLWELMTRGAPPYP 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 124 IGQGTYSNVYKAKDMLT-GKIV--ALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
IG+G + VY + GK + A+K + E +F+ E +I++ HPNV+ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT-EGIIMKDFSHPNVLSL 96
Query: 181 EGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
G+ R S +V YM+H DL + T + + Q+ G++ + +
Sbjct: 97 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 155
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLA-----SFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
HRD+ N ++D+ +K+ADFGLA FD H + +++ W L
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH-NKTGAKLPVKWMALES--LQTQ 212
Query: 295 DYGVGVDLWSAGCILAELLA-GKPIMP 320
+ D+WS G +L EL+ G P P
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 34/221 (15%)
Query: 115 ADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDH 174
A ++ +G+G Y V++ G+ VA+K F + + +S F E+ L H
Sbjct: 7 AHQITLLECVGKGRYGEVWRGS--WQGENVAVKI--FSSRDEKSW-FRETELYNTVMLRH 61
Query: 175 PNVIKLEGLVTSRM-----SCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCY--MHQLL 227
N++ G + S M S L+L+ HY H++ L ++ T V C + +
Sbjct: 62 ENIL---GFIASDMTSRHSSTQLWLITHY--HEMGSLYDYLQLT-TLDTVSCLRIVLSIA 115
Query: 228 SGLEHCH--------NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH---PMT 276
SGL H H + HRD+K N+L+ +G IAD GLA +
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNN 175
Query: 277 SRVVTLWYRPPELL-----LGATDYGVGVDLWSAGCILAEL 312
RV T Y PE+L + D VD+W+ G +L E+
Sbjct: 176 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 124 IGQGTYSNVYKAKDMLT-GKIV--ALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
IG+G + VY + GK + A+K + E +F+ E +I++ HPNV+ L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT-EGIIMKDFSHPNVLSL 101
Query: 181 EGLVTSRMSCSLYLVFHYMEH-DLAGLAASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVL 239
G+ R S +V YM+H DL + T + + Q+ G++ + +
Sbjct: 102 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 160
Query: 240 HRDIKGSNLLIDDDGVLKIADFGLA-----SFFDPNHKHPMTSRVVTLWYRPPELLLGAT 294
HRD+ N ++D+ +K+ADFGLA FD H + +++ W L
Sbjct: 161 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH-NKTGAKLPVKWMALES--LQTQ 217
Query: 295 DYGVGVDLWSAGCILAELLA-GKPIMP 320
+ D+WS G +L EL+ G P P
Sbjct: 218 KFTTKSDVWSFGVLLWELMTRGAPPYP 244
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 26/244 (10%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE----PESVKFMAREI 166
PR F K +G G + V +A GK A+ KV L+ + + + E+
Sbjct: 43 FPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSEL 100
Query: 167 LILRRL-DHPNVIKLEG--------LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEP 217
I+ L H N++ L G LV + C L+ +++ L P
Sbjct: 101 KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL-NFLRRKSRVLETDPAFAIANS 159
Query: 218 QVKC-----YMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLAS--FFDPN 270
+ + Q+ G+ + +HRD+ N+L+ + V KI DFGLA D N
Sbjct: 160 TLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 219
Query: 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLH 329
+ +R+ W P + Y V D+WS G +L E+ + G PG + +
Sbjct: 220 YIVKGNARLPVKWMAPESIF--DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 277
Query: 330 KIYK 333
K+ K
Sbjct: 278 KLVK 281
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 34/215 (15%)
Query: 121 IDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL 180
++ +G+G Y V++ G+ VA V+ + E F E+ L H N++
Sbjct: 42 LECVGKGRYGEVWRGS--WQGENVA---VKIFSSRDEKSWFRETELYNTVMLRHENIL-- 94
Query: 181 EGLVTSRM-----SCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKCY--MHQLLSGLEHC 233
G + S M S L+L+ HY H++ L ++ T V C + + SGL H
Sbjct: 95 -GFIASDMTSRHSSTQLWLITHY--HEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHL 150
Query: 234 H--------NNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKH---PMTSRVVTL 282
H + HRD+K N+L+ +G IAD GLA + RV T
Sbjct: 151 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 210
Query: 283 WYRPPELL-----LGATDYGVGVDLWSAGCILAEL 312
Y PE+L + D VD+W+ G +L E+
Sbjct: 211 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 17/236 (7%)
Query: 114 RADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALK---KVRFDNLEPES-VKFMAREILIL 169
+ +++ +G G + VYK + G+ V + K+ + P++ V+FM E LI+
Sbjct: 13 KETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFM-DEALIM 71
Query: 170 RRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLS 228
+DHP++++L G+ +S ++ LV M H L + + + Q+
Sbjct: 72 ASMDHPHLVRLLGVC---LSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAK 128
Query: 229 GLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HPMTSRVVTLWYRP 286
G+ + ++HRD+ N+L+ +KI DFGLA + + K + ++ W
Sbjct: 129 GMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 188
Query: 287 PELLLGATDYGVGVDLWSAGCILAELL--AGKPI--MPGRTEVEQLHKIYKLCGSP 338
+ + D+WS G + EL+ GKP +P R + L K +L P
Sbjct: 189 E--CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPP 242
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 39/231 (16%)
Query: 124 IGQGTYSNVYKAKDM-LTGK----IVALKKVRFDNLEPESVKFMAREILILRRLDHPNVI 178
+G+G + V KA L G+ VA+K ++ +N P ++ + E +L++++HP+VI
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-ENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 179 KLEGLVTSRMSCSLYLVFHYMEH-DLAG-----------------------LAASPEVKF 214
KL G + L L+ Y ++ L G L E
Sbjct: 90 KLYGACSQ--DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 215 TEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLAS--FFDPNHK 272
T + + Q+ G+++ ++HRD+ N+L+ + +KI+DFGL+ + + +
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 273 HPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL--LAGKPIMPG 321
R+ W L Y D+WS G +L E+ L G P PG
Sbjct: 208 KRSQGRIPVKWMAIESLF--DHIYTTQSDVWSFGVLLWEIVTLGGNPY-PG 255
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 97/244 (39%), Gaps = 26/244 (10%)
Query: 111 IPRRADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLE----PESVKFMAREI 166
PR F K +G G + V +A GK A+ KV L+ + + + E+
Sbjct: 43 FPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSEL 100
Query: 167 LILRRL-DHPNVIKLEG--------LVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEP 217
I+ L H N++ L G LV + C L+ +++ L P
Sbjct: 101 KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL-NFLRRKSRVLETDPAFAIANS 159
Query: 218 QVKC-----YMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLAS--FFDPN 270
+ Q+ G+ + +HRD+ N+L+ + V KI DFGLA D N
Sbjct: 160 TASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 219
Query: 271 HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLH 329
+ +R+ W P + Y V D+WS G +L E+ + G PG + +
Sbjct: 220 YIVKGNARLPVKWMAPESIF--DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 277
Query: 330 KIYK 333
K+ K
Sbjct: 278 KLVK 281
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 18/224 (8%)
Query: 118 FEKID-KIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPN 176
F K D +IG+G++ VYK D T VA +++ L + E L+ L HPN
Sbjct: 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPN 86
Query: 177 VIKLEGLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQVKC---YMHQLLSGLEHC 233
+++ S + +V E +G + +F ++K + Q+L GL+
Sbjct: 87 IVRFYDSWESTVKGKKCIVL-VTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFL 145
Query: 234 HNNG--VLHRDIKGSNLLIDD-DGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELL 290
H ++HRD+K N+ I G +KI D GLA+ + + + T + PE
Sbjct: 146 HTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAV---IGTPEFXAPEXY 202
Query: 291 LGATDYGVGVDLWSAG-CILAELLAGKPIMPGRTEVEQLHKIYK 333
Y VD+++ G C L + P +E + +IY+
Sbjct: 203 --EEKYDESVDVYAFGXCXLEXATSEYPY----SECQNAAQIYR 240
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 97/231 (41%), Gaps = 15/231 (6%)
Query: 118 FEKIDKIGQGTYSNVYKAKDMLTG---KIVALKKVRFDNLEPESVKFMAREILILRRLDH 174
K+ +G G + VYK + G KI KV +N P++ K + E ++ +
Sbjct: 19 LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS 78
Query: 175 PNVIKLEGLVTSRMSCSLYLVFHYMEHD-LAGLAASPEVKFTEPQVKCYMHQLLSGLEHC 233
P V +L G+ ++ ++ LV M + L + + + Q+ G+ +
Sbjct: 79 PYVSRLLGIC---LTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYL 135
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHK--HPMTSRVVTLWYRPPELLL 291
+ ++HRD+ N+L+ +KI DFGLA D + H +V W +L
Sbjct: 136 EDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL- 194
Query: 292 GATDYGVGVDLWSAGCILAELL--AGKPI--MPGRTEVEQLHKIYKLCGSP 338
+ D+WS G + EL+ KP +P R + L K +L P
Sbjct: 195 -RRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPP 244
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 102/226 (45%), Gaps = 25/226 (11%)
Query: 124 IGQGTYSNVY----KAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIK 179
+G+G + +V K +D + K VA+K ++ DN ++ E ++ HPNVI+
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLK-VAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 180 LEGLVTSRMSCSL---YLVFHYMEH-DL------AGLAASPEVKFTEPQVKCYMHQLLSG 229
L G+ S + ++ +M++ DL + L P+ + +K +M + G
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLK-FMVDIALG 159
Query: 230 LEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLAS--FFDPNHKHPMTSRVVTLWYRPP 287
+E+ N LHRD+ N ++ DD + +ADFGL+ + ++ +++ W
Sbjct: 160 MEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIE 219
Query: 288 ELLLGATDYGVGVDLWSAGCILAELLA-GKPIMPGRTEVEQLHKIY 332
L Y D+W+ G + E+ G PG Q H++Y
Sbjct: 220 S--LADRVYTSKSDVWAFGVTMWEIATRGMTPYPGV----QNHEMY 259
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 123 KIGQGTYSNVYKA-KDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLE 181
++G G + +V + M +I KV E + M RE I+ +LD+P +++L
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 182 GLVTSRMSCSLYLVFHYMEHDLAGLAASPEVKFTEPQ--------VKCYMHQLLSGLEHC 233
G+ + +L LV ++AG P KF + V +HQ+ G+++
Sbjct: 77 GVCQAE---ALMLVM-----EMAG--GGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL 126
Query: 234 HNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLW---YRPPELL 290
+HRD+ N+L+ + KI+DFGL+ + + T+R W + PE
Sbjct: 127 EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY-YTARSAGKWPLKWYAPE-C 184
Query: 291 LGATDYGVGVDLWSAGCILAELLA 314
+ + D+WS G + E L+
Sbjct: 185 INFRKFSSRSDVWSYGVTMWEALS 208
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,077,111
Number of Sequences: 62578
Number of extensions: 507792
Number of successful extensions: 4153
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1056
Number of HSP's gapped (non-prelim): 1157
length of query: 410
length of database: 14,973,337
effective HSP length: 101
effective length of query: 309
effective length of database: 8,652,959
effective search space: 2673764331
effective search space used: 2673764331
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)