BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015249
(410 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 462 bits (1189), Expect = e-130, Method: Compositional matrix adjust.
Identities = 217/373 (58%), Positives = 286/373 (76%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ Y A FIE++AEE KRV G+ +P ++R+ V+K+P+GV AITPWNFP AMI RKV
Sbjct: 110 EIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKV 169
Query: 92 GPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPALA GC +VVKP+E TP G+P GV++VV+G+ IG + ++P VR
Sbjct: 170 GPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVR 229
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
K++FTGSTAVG+ LMA +A TVKK++LELGGNAP IVFDDADL+ AV GA+A+K+RN+GQ
Sbjct: 230 KLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQ 289
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVC NR V E +Y+ FAD + AV LKVG G G GPLIN+AA++KVE+ + DA
Sbjct: 290 TCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADA 349
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
++KGA ++ GG+RH+LG F+EPTVL+ VK +M V++EE FGP+APL F +EEE + +A
Sbjct: 350 LAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLA 409
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
NDT GLAAY+++ ++ R WRV+EALEYG+VG+N GLIS EVAPFGGVKQSGLGREGS Y
Sbjct: 410 NDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHY 469
Query: 392 GMDEFLEIKYVCL 404
G+D+++ IKY+C+
Sbjct: 470 GIDDYVVIKYLCV 482
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 461 bits (1185), Expect = e-130, Method: Compositional matrix adjust.
Identities = 215/374 (57%), Positives = 279/374 (74%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ Y A FIE++AEE KR+YG+ IP D+RL V+KQP+GV AITPWNFP AMITRK
Sbjct: 107 EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKA 166
Query: 92 GPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPALA GCT+V+KP+ TP G+P GV NVV G+A +G+ L ++P VR
Sbjct: 167 GPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVR 226
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
K++FTGST +G++LM A +KKVSLELGGNAP IVFDDADL+ AV GALA+KFRN+GQ
Sbjct: 227 KLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQ 286
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVCANR+ VQ+G+Y++FA+ +A+ L +GDG GV GPLI++ A+ KVE + DA
Sbjct: 287 TCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADA 346
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
+ KGA+V+ GG+ H G F++PT+L +V + VS+EE FGP+APL FK E + I A
Sbjct: 347 LEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQA 406
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
NDT GLAAY + +L R +RV EALEYG+VG+N G+IS EVAPFGG+K SGLGREGSKY
Sbjct: 407 NDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKY 466
Query: 392 GMDEFLEIKYVCLG 405
G++++LEIKY+C+G
Sbjct: 467 GIEDYLEIKYMCIG 480
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 460 bits (1184), Expect = e-130, Method: Compositional matrix adjust.
Identities = 215/374 (57%), Positives = 279/374 (74%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ Y A FIE++AEE KR+YG+ IP D+RL V+KQP+GV AITPWNFP AMITRK
Sbjct: 107 EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKA 166
Query: 92 GPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPALA GCT+V+KP+ TP G+P GV NVV G+A +G+ L ++P VR
Sbjct: 167 GPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVR 226
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
K++FTGST +G++LM A +KKVSLELGGNAP IVFDDADL+ AV GALA+KFRN+GQ
Sbjct: 227 KLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQ 286
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVCANR+ VQ+G+Y++FA+ +A+ L +GDG GV GPLI++ A+ KVE + DA
Sbjct: 287 TCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADA 346
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
+ KGA+V+ GG+ H G F++PT+L +V + VS+EE FGP+APL FK E + I A
Sbjct: 347 LEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQA 406
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
NDT GLAAY + +L R +RV EALEYG+VG+N G+IS EVAPFGG+K SGLGREGSKY
Sbjct: 407 NDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKY 466
Query: 392 GMDEFLEIKYVCLG 405
G++++LEIKY+C+G
Sbjct: 467 GIEDYLEIKYMCIG 480
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 442 bits (1138), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/380 (59%), Positives = 285/380 (75%), Gaps = 4/380 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ Y A F+E+++EEA+RVYG+II DRR VLKQP+GVA ITPWNFP AMITRKV
Sbjct: 108 EILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKV 167
Query: 92 GPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVV---MGNAPDIGDALLTSP 148
G ALA GCTVVVKP+E TP GIP GV NV+ NA ++G+A+ T P
Sbjct: 168 GAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDP 227
Query: 149 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
V KI+FTGST GK L+ AA +VK+VS+ELGG AP IVFD A+++ AV GA+A+KFRN
Sbjct: 228 LVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRN 287
Query: 209 SGQTCVCANRVLVQEGIYEKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETF 267
+GQTCVC+N+ LVQ GI++ F AF++A+K NL+VG+GF EG QGPLIN+ A+EKVE
Sbjct: 288 TGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQ 347
Query: 268 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
V DAVSKGA V+ GG+RH LG F+EPT+L NV +ML + EE FGP+AP++ F TEEEA
Sbjct: 348 VNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEA 407
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE 387
I +AN + GLA Y ++ + + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGRE
Sbjct: 408 IAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGRE 467
Query: 388 GSKYGMDEFLEIKYVCLGDM 407
GSKYG+DE+LE+KYVC G +
Sbjct: 468 GSKYGIDEYLELKYVCYGGL 487
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 440 bits (1131), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/372 (60%), Positives = 281/372 (75%), Gaps = 2/372 (0%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV Y A FIE++AEEAKRVYG+ IPA +RL V++QPVGV AITPWNFP AMITRK
Sbjct: 130 EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKA 189
Query: 92 GPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PALA GCT++V+P++ TP GIP GV+ +V G A +IG L ++ VR
Sbjct: 190 APALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVR 249
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
K++FTGST VG+ LMA A T+K++SLELGGNAP IVFDDADL+ AV+GA+ +K+RN+GQ
Sbjct: 250 KLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQ 309
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVCANR+ VQ G+Y+KFA+ + VK LKVG+G GVV GP+I + A+ KV+ +EDA
Sbjct: 310 TCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDA 369
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
VSKGAK++ GG+ LG F+EP +L+ V S+MLV++EE FGP+APL F TEEE I A
Sbjct: 370 VSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQA 427
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
NDT GLAAY +T N R RVSEALEYG+VG N GLIS EVAPFGGVKQSGLGREGSKY
Sbjct: 428 NDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKY 487
Query: 392 GMDEFLEIKYVC 403
G++E+LE KY+C
Sbjct: 488 GIEEYLETKYIC 499
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 439 bits (1129), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/380 (59%), Positives = 284/380 (74%), Gaps = 4/380 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ Y A F+E+++EEA+RVYG+II DRR VLKQP+GVA ITPWNFP AMITRKV
Sbjct: 108 EILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKV 167
Query: 92 GPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVV---MGNAPDIGDALLTSP 148
G ALA GCTVVVKP+E TP GIP GV NV+ NA ++G+A+ T P
Sbjct: 168 GAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDP 227
Query: 149 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
V KI+FTGST GK L+ AA +VK+VS+ELGG AP IVFD A+++ AV GA+A+KFRN
Sbjct: 228 LVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRN 287
Query: 209 SGQTCVCANRVLVQEGIYEKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETF 267
+GQT VC+N+ LVQ GI++ F AF++A+K NL+VG+GF EG QGPLIN+ A+EKVE
Sbjct: 288 TGQTAVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQ 347
Query: 268 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
V DAVSKGA V+ GG+RH LG F+EPT+L NV +ML + EE FGP+AP++ F TEEEA
Sbjct: 348 VNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEA 407
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE 387
I +AN + GLA Y ++ + + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGRE
Sbjct: 408 IAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGRE 467
Query: 388 GSKYGMDEFLEIKYVCLGDM 407
GSKYG+DE+LE+KYVC G +
Sbjct: 468 GSKYGIDEYLELKYVCYGGL 487
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 313 bits (801), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 164/376 (43%), Positives = 233/376 (61%), Gaps = 5/376 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYG-EIIPATLPDRRL--FVLKQPVGVAGAITPWNFPLAMIT 88
++D A E++A +A+ + G + P TLP R VL+QP+GV G I+PWN+PL M T
Sbjct: 107 DIDDVASCFEYFAGQAEALDGKQKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMAT 166
Query: 89 RKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSP 148
K+ PALA GCT V+KPSE G+PPGV+N++ G PD G L++ P
Sbjct: 167 WKIAPALAAGCTAVLKPSELASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHP 226
Query: 149 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
V KI FTGS+A G K+MA AA VK V+LELGG +P +VF+D D++ V + F
Sbjct: 227 DVDKIAFTGSSATGSKVMASAAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWT 286
Query: 209 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 268
+GQ C +R+LV E I +F D K KN+K+ D F EG GP+I+K +K+ F+
Sbjct: 287 NGQICSATSRLLVHESIAAEFVDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFI 346
Query: 269 EDAVSKGAKVLLGGRR--HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326
A S+GA +L GG R H + EPT+++++ + M + +EEVFGPV + F +E+E
Sbjct: 347 STAKSEGATILYGGSRPEHLKKGYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDE 406
Query: 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGR 386
AI +ANDT GLAA +F+N+L+R R+++ALE G V VN AP+GG+K+SG GR
Sbjct: 407 AIALANDTEYGLAAAVFSNDLERCERITKALEVGAVWVNCSQPCFVQAPWGGIKRSGFGR 466
Query: 387 EGSKYGMDEFLEIKYV 402
E ++G+ +L IK V
Sbjct: 467 ELGEWGIQNYLNIKQV 482
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 298 bits (764), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 156/374 (41%), Positives = 225/374 (60%), Gaps = 1/374 (0%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV + A +I++ AE A+R GEII + P + + K+ +GV I PWNFP +I RK+
Sbjct: 104 EVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKM 163
Query: 92 GPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PAL G T+V+KPSEFTP G+P GV N+V+G +G L +P+V
Sbjct: 164 APALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVA 223
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
++ TGS + G+K+MA AA + KV LELGG AP IV DDADL +AV + ++ NSGQ
Sbjct: 224 MVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQ 283
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD-GFGEGVVQGPLINKAALEKVETFVED 270
C CA RV VQ+GIY++F + +A++ ++ G+ + GPLIN AALE+VE V
Sbjct: 284 VCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVAR 343
Query: 271 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 330
AV +GA+V LGG+ +Y PT+L +V+ EM + EE FGPV P++ F T EEAI M
Sbjct: 344 AVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAISM 403
Query: 331 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 390
AND++ GL + I+T NL + + L++G +N G ++SG+G K
Sbjct: 404 ANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGK 463
Query: 391 YGMDEFLEIKYVCL 404
+G+ E+L+ + V L
Sbjct: 464 HGLHEYLQTQVVYL 477
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 296 bits (758), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 154/374 (41%), Positives = 224/374 (59%), Gaps = 1/374 (0%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV + A +I++ AE A+R GEII + P + + K+ +GV I PWNFP +I RK+
Sbjct: 104 EVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKM 163
Query: 92 GPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PAL G T+V+KPSEFTP G+P GV N+V+G +G L +P+V
Sbjct: 164 APALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVA 223
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
++ TGS + G+K+MA AA + KV LELGG AP IV DDADL +AV + ++ NSGQ
Sbjct: 224 MVSMTGSVSAGEKIMATAAKNITKVXLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQ 283
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD-GFGEGVVQGPLINKAALEKVETFVED 270
C CA RV VQ+GIY++F + +A++ ++ G+ + GPLIN AALE+VE V
Sbjct: 284 VCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVAR 343
Query: 271 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 330
AV +GA+V GG+ +Y PT+L +V+ EM + EE FGPV P++ F T E+AI M
Sbjct: 344 AVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISM 403
Query: 331 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 390
AND++ GL + I+T NL + + L++G +N G ++SG+G K
Sbjct: 404 ANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGK 463
Query: 391 YGMDEFLEIKYVCL 404
+G+ E+L+ + V L
Sbjct: 464 HGLHEYLQTQVVYL 477
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 296 bits (757), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/374 (41%), Positives = 224/374 (59%), Gaps = 1/374 (0%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV + A +I++ AE A+R GEII + P + + K+ +GV I PWNFP +I RK+
Sbjct: 104 EVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKM 163
Query: 92 GPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PAL G T+V+KPSEFTP G+P GV N+V+G +G L +P+V
Sbjct: 164 APALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVA 223
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
++ TGS + G+K+MA AA + KV LELGG AP IV DDADL +AV + ++ NSGQ
Sbjct: 224 MVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQ 283
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD-GFGEGVVQGPLINKAALEKVETFVED 270
C CA RV VQ+GIY++F + +A++ ++ G+ + GPLIN AALE+VE V
Sbjct: 284 VCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVAR 343
Query: 271 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 330
AV +GA+V GG+ +Y PT+L +V+ EM + EE FGPV P++ F T E+AI M
Sbjct: 344 AVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISM 403
Query: 331 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 390
AND++ GL + I+T NL + + L++G +N G ++SG+G K
Sbjct: 404 ANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGK 463
Query: 391 YGMDEFLEIKYVCL 404
+G+ E+L+ + V L
Sbjct: 464 HGLHEYLQTQVVYL 477
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 286 bits (733), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/366 (39%), Positives = 222/366 (60%), Gaps = 4/366 (1%)
Query: 42 FYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTV 101
++A A + GE+I + +PD ++K+PVGV ITPWN+PL + K+ PALA GC++
Sbjct: 142 YFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSL 201
Query: 102 VVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 161
V+KPSE TP G P G +N+++G ++GD + +V ++FTG
Sbjct: 202 VMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIET 261
Query: 162 GKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLV 221
GK +M AA V ++LELGG P I+FDDAD +AV+ AL + ++GQ C +R+LV
Sbjct: 262 GKHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILV 321
Query: 222 QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 281
Q I +KF A VK +K+G+GF GP+I+ K+E++++ A ++GA + +G
Sbjct: 322 QNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVG 381
Query: 282 GRRHSLGM----TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG 337
G+R F+EPTV++N + M + +EEVFGPV + F+TE+EAI +AND+ G
Sbjct: 382 GKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYG 441
Query: 338 LAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFL 397
LA +F+ ++ + RV+ L+ G V +N+ AP+GG KQSG+GRE K G++E+L
Sbjct: 442 LAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYL 501
Query: 398 EIKYVC 403
K++
Sbjct: 502 VSKHIL 507
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 285 bits (730), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 160/376 (42%), Positives = 231/376 (61%), Gaps = 5/376 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYG-EIIPATLP--DRRLFVLKQPVGVAGAITPWNFPLAMIT 88
++D A E+YA+ A+++ + P +LP + VL++P+GV G ITPWN+P+ M T
Sbjct: 110 DIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMAT 169
Query: 89 RKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSP 148
KV PALA GC ++KPSE G+PPGV+N++ G P+ G L T P
Sbjct: 170 WKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHP 229
Query: 149 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
V K+ FTGS+A G K+M AA VK VSLELGG +P +VF+D DL+ A A+ F
Sbjct: 230 DVDKVAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWT 289
Query: 209 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 268
+GQ C +R+++ E I +F + K +KN+K+ D EG GP++++ EK+ FV
Sbjct: 290 NGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFV 349
Query: 269 EDAVSKGAKVLLGGRR--HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326
+A S+GA +L GG R H F EPT++++V + M + REEVFGPV + F TEEE
Sbjct: 350 SNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEE 409
Query: 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGR 386
AI +ANDT GL A + +N+L+R RV++A + G+V VN AP+GGVK+SG GR
Sbjct: 410 AIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGR 469
Query: 387 EGSKYGMDEFLEIKYV 402
E ++G+D +L +K V
Sbjct: 470 ELGEWGLDNYLSVKQV 485
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 283 bits (724), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 170/375 (45%), Positives = 220/375 (58%), Gaps = 1/375 (0%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EVDY A F ++ A+ + IP D V +PVGV G I PWNFP+ I +K+
Sbjct: 109 EVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGXIAKKL 168
Query: 92 GPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
ALA GC V+KP+ TP +P G VN+V G A IG L V
Sbjct: 169 SAALAAGCPSVIKPASETPLTXIAFFSVXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVP 228
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
++FTGST VG+KL+ A VKK++LELGGNAP IVFDDADL A + +A KFR GQ
Sbjct: 229 XLSFTGSTEVGRKLIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQ 288
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
TCVCANR+ V E + + F ++ V VGDG +G+ GPLINK +KV+ ++DA
Sbjct: 289 TCVCANRIFVHEKVADAFGQKLAERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDA 348
Query: 272 VSKGAKVLLGGRRHSLGM-TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 330
+ KGA ++ G + LG F+ PTV+ V E +EE FGP+ P F+TEEE I
Sbjct: 349 LDKGASLVAGKQPAELGDGLFFPPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDA 408
Query: 331 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 390
NDT GLA+Y+FT + +R RV+ L +G VG N G T APFGG K SG+GREG
Sbjct: 409 GNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGXKASGIGREGGL 468
Query: 391 YGMDEFLEIKYVCLG 405
G+ EF+E + V G
Sbjct: 469 EGLFEFVEAQTVPRG 483
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 283 bits (724), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 154/376 (40%), Positives = 223/376 (59%), Gaps = 5/376 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRV-YGEIIPATLPDR--RLFVLKQPVGVAGAITPWNFPLAMIT 88
++D A E++A++A+ + + P +LP + + ++P+GV G ITPWN+PL M T
Sbjct: 127 DMDDVAGCFEYFADQAEALDKRQNSPVSLPMETFKCHLRREPIGVVGLITPWNYPLLMAT 186
Query: 89 RKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSP 148
K+ PALA GCT V+KPSE G+P GV+N+V G PD G L P
Sbjct: 187 WKIAPALAAGCTAVLKPSELASVTCLELADICKEVGLPSGVLNIVTGLGPDAGAPLSAHP 246
Query: 149 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
V K+ FTGS GKK+MA AA VK V+LELGG +P +VFDD D++ AV L F
Sbjct: 247 DVDKVAFTGSFETGKKIMASAAPMVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFWT 306
Query: 209 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 268
+GQ C +R+L+ I +KF + KN+KV D EG GP++++ EK++ F+
Sbjct: 307 NGQICSATSRLLIHTKIAKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFI 366
Query: 269 EDAVSKGAKVLLGGRR--HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326
+A S+GA +L GG R H F EPT+++++ + M + REEVFGPV + F TE+E
Sbjct: 367 SNAKSQGATILTGGVRPAHLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDE 426
Query: 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGR 386
AI +ANDT GLA + + + +R R+SE ++ G + VN AP+GG K+SG GR
Sbjct: 427 AIELANDTQYGLAGAVISGDRERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGR 486
Query: 387 EGSKYGMDEFLEIKYV 402
E + G+D +L +K V
Sbjct: 487 ELGEGGIDNYLSVKQV 502
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 282 bits (722), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/369 (42%), Positives = 215/369 (58%), Gaps = 4/369 (1%)
Query: 38 KFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALAC 97
K + +YA A +++G IP D F +P+GV G I PWNFPL M T K+ PAL C
Sbjct: 126 KTLRYYAGWADKIHGMTIPVD-GDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCC 184
Query: 98 GCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTG 157
G TVV+KP+E TP G PPGVVN++ G P G A+ + + KI FTG
Sbjct: 185 GNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTG 244
Query: 158 STAVGKKLMAGAAG--TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVC 215
ST VGK L+ AAG +K+V+LELGG +P I+F DADL+ AV A F N GQ C
Sbjct: 245 STEVGK-LIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTA 303
Query: 216 ANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKG 275
+R+ V+E IYE+F + K VG F QGP I+K K+ ++ V++G
Sbjct: 304 GSRIFVEESIYEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEG 363
Query: 276 AKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTN 335
AK+ GG+ F EPTV SNV +M +++EE+FGPV +L FKT +E I AN+++
Sbjct: 364 AKLECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSD 423
Query: 336 AGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDE 395
GL A +FTN++ + VS A++ G V +N +PFGG K SG GRE ++G+ E
Sbjct: 424 FGLVAAVFTNDINKALMVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLRE 483
Query: 396 FLEIKYVCL 404
+ E+K V +
Sbjct: 484 YSEVKTVTV 492
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 282 bits (721), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 161/371 (43%), Positives = 217/371 (58%), Gaps = 8/371 (2%)
Query: 38 KFIEFYAEEAKRVYGEIIPATLPDRRLFVL--KQPVGVAGAITPWNFPLAMITRKVGPAL 95
K + + A A ++ G IP D F +PVGV G I PWNFPL M K+GPAL
Sbjct: 128 KTLRYCAGWADKIQGRTIPM---DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPAL 184
Query: 96 ACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITF 155
+CG TVVVKP+E TP G PPGVVN+V G P G A+ + V K+ F
Sbjct: 185 SCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAF 244
Query: 156 TGSTAVGKKLMAGAAG--TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTC 213
TGST VG KL+ AAG +K+VSLELGG +PCIVF DADL+ AV A F + GQ C
Sbjct: 245 TGSTEVG-KLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCC 303
Query: 214 VCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS 273
+ A+R+ V+E IY++F + K +G+ GV QGP I+K EK+ +E
Sbjct: 304 IAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKK 363
Query: 274 KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND 333
+GAK+ GG F +PTV S+V +M +++EE+FGPV ++ FK+ ++ I AN+
Sbjct: 364 EGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANN 423
Query: 334 TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGM 393
T GL+A IFTN++ + VS AL+ G V VN + + PFGG K SG GRE +YG
Sbjct: 424 TFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGF 483
Query: 394 DEFLEIKYVCL 404
E+ E+K V +
Sbjct: 484 HEYTEVKTVTI 494
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 282 bits (721), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 157/382 (41%), Positives = 218/382 (57%), Gaps = 6/382 (1%)
Query: 26 SSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLF--VLKQPVGVAGAITPWNFP 83
+S L ++DY K + + A A ++ G IP D F +P+GV G I PWN P
Sbjct: 116 ASAYLMDLDYCIKALRYCAGWADKIQGRTIPV---DGEFFSYTRHEPIGVCGLIFPWNAP 172
Query: 84 LAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDA 143
+ ++ K+GPAL CG TV+VKP+E TP G PPGVVN+V G P G A
Sbjct: 173 MILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAA 232
Query: 144 LLTSPQVRKITFTGSTAVGKKLM-AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGAL 202
+ + V K+ FTGST VGK + A A +K+V+LELG PCIVF DADL+ AV A
Sbjct: 233 ISSHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAH 292
Query: 203 AAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALE 262
F N GQ+C+ A+++ V+E IY++F + K G+ GV GP INKA
Sbjct: 293 QGVFTNQGQSCIAASKLFVEEAIYDEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQHN 352
Query: 263 KVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322
K+ +E +GAK+ GG F +PTV SNV +M +++EE+FGPV ++ FK
Sbjct: 353 KIMELIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFK 412
Query: 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQS 382
+ +E I AN+T GL A +FT +L + VS AL+ G V VN L ++ +P GG K S
Sbjct: 413 SLDEVIKRANNTYYGLVAGVFTKDLDKAVTVSSALQAGTVWVNCYLAASAQSPAGGFKMS 472
Query: 383 GLGREGSKYGMDEFLEIKYVCL 404
G GRE +YG+ E+ E+K V +
Sbjct: 473 GHGREMGEYGIHEYTEVKTVTM 494
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 275 bits (703), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 146/379 (38%), Positives = 213/379 (56%), Gaps = 4/379 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EVD A FI++ + A + G+I+P+ D ++++ K P GV IT WNFPLA+ RK+
Sbjct: 110 EVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKI 169
Query: 92 GPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
GPAL G T+V+KP++ TP G+P GV+NV+ G +G L SP +
Sbjct: 170 GPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITK 229
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
IT TGST GK++ +A + V LELGG AP +V DDADL+ A AL +F N GQ
Sbjct: 230 MITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQ 289
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
C C R+ V +Y++F F VK LKVGD GP N+ ++ ++ V +A
Sbjct: 290 VCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEA 349
Query: 272 VSKGAKVLLGGRRHSL----GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
+ +GA V GG+ ++ G +YEPTVL +VK + +V EE FGP+ P++ + E+A
Sbjct: 350 IKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQA 409
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE 387
I ND+ GL+AY+ T + + LE G V +N G+ G KQSG G E
Sbjct: 410 IEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGE 469
Query: 388 GSKYGMDEFLEIKYVCLGD 406
K+G++++LE K V + +
Sbjct: 470 DGKFGLEQYLEKKTVYINE 488
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 154/378 (40%), Positives = 229/378 (60%), Gaps = 5/378 (1%)
Query: 30 LREVDYGAKFIEFYAEEAKRVYG-EIIPATLP--DRRLFVLKQPVGVAGAITPWNFPLAM 86
L ++D E+YA A+ + + P +LP + ++LK+P+GV ITPWN+P M
Sbjct: 108 LADLDDVVACFEYYAGLAEELDSKQKAPISLPMDTFKSYILKEPIGVVALITPWNYPFLM 167
Query: 87 ITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLT 146
T K+ PALA GC ++KPSE G+P GV+N+V G + G +L +
Sbjct: 168 ATWKIAPALAAGCAAILKPSELASVTCLELGEICKEVGLPRGVLNIVTGLGHEAGASLAS 227
Query: 147 SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKF 206
P V KI+FTGS+A G K+M AA VK VSLELGG +P +VF+D DL+ + F
Sbjct: 228 HPDVDKISFTGSSATGSKIMTTAAQLVKPVSLELGGKSPIVVFEDVDLDKVAEWTVFGCF 287
Query: 207 RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVET 266
+GQ C +R++V E I +F D K +N+K+ D EG GP++++A +KV
Sbjct: 288 FTNGQICSATSRLIVHESIAVEFVDKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKVLN 347
Query: 267 FVEDAVSKGAKVLLGGRR--HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324
+ A S+GA +L GGRR H F EPT++++V + M + REEVFGPV + F TE
Sbjct: 348 CISSAKSEGATILTGGRRPEHLKKGYFVEPTIITDVTTSMQIWREEVFGPVLAVKTFSTE 407
Query: 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGL 384
EEAI++ANDT+ GL + + +N+L+R R+S+AL+ G+V +N S AP+GG+K+SG
Sbjct: 408 EEAINLANDTHYGLGSAVMSNDLERCERLSKALQAGIVWINCAQPSFIQAPWGGIKRSGF 467
Query: 385 GREGSKYGMDEFLEIKYV 402
GRE ++G++ +L +K V
Sbjct: 468 GRELGEWGLENYLSVKQV 485
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 263 bits (671), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/376 (39%), Positives = 216/376 (57%), Gaps = 2/376 (0%)
Query: 30 LREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 89
L ++D K + +YA A + +G+ IP D + +PVGV G I PWNFPL M
Sbjct: 119 LVDLDMVLKCLRYYAGWADKYHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAW 177
Query: 90 KVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQ 149
K+GPALA G VV+K +E TP G PPGVVN+V G P G A+ +
Sbjct: 178 KLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHED 237
Query: 150 VRKITFTGSTAVGKKL-MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
V K+ FTGST +G+ + +A + +K+V+LELGG +P I+ DAD++ AV A A F N
Sbjct: 238 VDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFN 297
Query: 209 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 268
GQ C +R VQE IY++F + K+ VG+ F QGP +++ +K+ ++
Sbjct: 298 QGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYI 357
Query: 269 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 328
+GAK+L GG + F +PTV +V+ M +++EE+FGPV +L FKT EE +
Sbjct: 358 NTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVV 417
Query: 329 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREG 388
AN++ GLAA +FT +L + +S+AL+ G V VN + +PFGG K SG GRE
Sbjct: 418 GRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGREL 477
Query: 389 SKYGMDEFLEIKYVCL 404
+YG+ + E+K V +
Sbjct: 478 GEYGLQAYTEVKTVTV 493
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 262 bits (670), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/376 (39%), Positives = 216/376 (57%), Gaps = 2/376 (0%)
Query: 30 LREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 89
L ++D K + +YA A + +G+ IP D + +PVGV G I PWNFPL M
Sbjct: 113 LVDLDMVLKCLRYYAGWADKYHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAW 171
Query: 90 KVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQ 149
K+GPALA G VV+K +E TP G PPGVVN+V G P G A+ +
Sbjct: 172 KLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHED 231
Query: 150 VRKITFTGSTAVGKKL-MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
V K+ FTGST +G+ + +A + +K+V+LELGG +P I+ DAD++ AV A A F N
Sbjct: 232 VDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFN 291
Query: 209 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 268
GQ C +R VQE IY++F + K+ VG+ F QGP +++ +K+ ++
Sbjct: 292 QGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYI 351
Query: 269 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 328
+GAK+L GG + F +PTV +V+ M +++EE+FGPV +L FKT EE +
Sbjct: 352 NTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVV 411
Query: 329 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREG 388
AN++ GLAA +FT +L + +S+AL+ G V VN + +PFGG K SG GRE
Sbjct: 412 GRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGREL 471
Query: 389 SKYGMDEFLEIKYVCL 404
+YG+ + E+K V +
Sbjct: 472 GEYGLQAYTEVKTVTV 487
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 262 bits (670), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/376 (39%), Positives = 217/376 (57%), Gaps = 2/376 (0%)
Query: 30 LREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 89
L ++D K + +YA A + +G+ IP D + +PVGV G I PWNFPL M
Sbjct: 119 LVDLDMVLKCLRYYAGWADKYHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAW 177
Query: 90 KVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQ 149
K+GPALA G VV+K +E TP G PPGVVN+V G P G A+ +
Sbjct: 178 KLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHED 237
Query: 150 VRKITFTGSTAVGKKL-MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
V K+ FTGST +G+ + +A + +K+V+L+LGG +P I+ DAD++ AV A A F N
Sbjct: 238 VDKVAFTGSTEIGRVIQVAAGSSNLKRVTLQLGGKSPNIIMSDADMDWAVEQAHFALFFN 297
Query: 209 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 268
GQ+C +R VQE IY++F + K+ VG+ F QGP +++ +K+ ++
Sbjct: 298 QGQSCSAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYI 357
Query: 269 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 328
+GAK+L GG + F +PTV +V+ M +++EE+FGPV +L FKT EE +
Sbjct: 358 NTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVV 417
Query: 329 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREG 388
AN++ GLAA +FT +L + +S+AL+ G V VN + +PFGG K SG GRE
Sbjct: 418 GRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGREL 477
Query: 389 SKYGMDEFLEIKYVCL 404
+YG+ + E+K V +
Sbjct: 478 GEYGLQAYTEVKTVTV 493
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 262 bits (669), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 152/377 (40%), Positives = 221/377 (58%), Gaps = 6/377 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGE-IIPATL--PDRRLFVLKQPVGVAGAITPWNFPLAMIT 88
++D A E+YA A+ + + P L + +VL++P+GV G ITPWN+PL M
Sbjct: 123 DMDDVAGCFEYYAGLAEALDSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAI 182
Query: 89 RKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSP 148
KV PALA GC ++KPSE G+P G +N++ G P+ G L + P
Sbjct: 183 WKVAPALAAGCAAILKPSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHP 242
Query: 149 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD-LNVAVNGALAAKFR 207
V KI+FTGS G K+M AA VK VSLELGG +P +VFDD D L++A L F
Sbjct: 243 HVDKISFTGSGPTGSKIMTAAAQLVKPVSLELGGKSPIVVFDDIDNLDIAAEWTLFGIFA 302
Query: 208 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 267
N+GQ C +R++VQE I F D K KN+K+ D E GP+++ EKV F
Sbjct: 303 NTGQVCSATSRLIVQENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKF 362
Query: 268 VEDAVSKGAKVLLGGRR-HSLGMTFY-EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325
+ +A S+GA +L GG R L +Y +PT++++V + M + +EEVFGPV + FKTEE
Sbjct: 363 ISNAKSEGATILCGGERPQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEE 422
Query: 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG 385
+AI +ANDT GL A + + +++R R ++A + G++ +N + P+GG K+SG G
Sbjct: 423 QAIELANDTKYGLGAAVMSKDVKRCERFTKAFQTGIIWINCSQPTFNELPWGGKKRSGFG 482
Query: 386 REGSKYGMDEFLEIKYV 402
R+ K+G++ FL IK V
Sbjct: 483 RDLGKWGLENFLNIKQV 499
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 261 bits (666), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 147/376 (39%), Positives = 216/376 (57%), Gaps = 2/376 (0%)
Query: 30 LREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 89
L ++D K + +YA A + +G+ IP D + +PVGV G I PWNFPL M
Sbjct: 119 LVDLDMVLKCLRYYAGWADKYHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAW 177
Query: 90 KVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQ 149
K+GPALA G VV+K +E TP G PPGVVN+V G P G A+ +
Sbjct: 178 KLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHED 237
Query: 150 VRKITFTGSTAVGKKL-MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
V K+ FTGST +G+ + +A + +K+V+LELGG +P I+ DAD++ AV A A F N
Sbjct: 238 VDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFN 297
Query: 209 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 268
GQ C +R VQE IY++F + K+ VG+ F QGP +++ +K+ ++
Sbjct: 298 QGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYI 357
Query: 269 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 328
+GAK+L GG + F +PTV +V+ M +++EE+FGPV +L FKT EE +
Sbjct: 358 NTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVV 417
Query: 329 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREG 388
AN++ GLAA +FT +L + +S+AL+ G V VN + +PFGG K SG G+E
Sbjct: 418 GRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGQEL 477
Query: 389 SKYGMDEFLEIKYVCL 404
+YG+ + E+K V +
Sbjct: 478 GEYGLQAYTEVKTVTV 493
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 261 bits (666), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 147/376 (39%), Positives = 215/376 (57%), Gaps = 2/376 (0%)
Query: 30 LREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 89
L ++D K + +YA A + +G+ IP D + +PVGV G I PWNFPL M
Sbjct: 119 LVDLDMVLKCLRYYAGWADKYHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAW 177
Query: 90 KVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQ 149
K+GPALA G VV+K +E TP G PPGVVN+V G P G A+ +
Sbjct: 178 KLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHED 237
Query: 150 VRKITFTGSTAVGKKL-MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
V K+ F GST +G+ + +A + +K+V+LELGG +P I+ DAD++ AV A A F N
Sbjct: 238 VDKVAFAGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFN 297
Query: 209 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 268
GQ C +R VQE IY++F + K+ VG+ F QGP +++ +K+ ++
Sbjct: 298 QGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYI 357
Query: 269 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 328
+GAK+L GG + F +PTV +V+ M +++EE+FGPV +L FKT EE +
Sbjct: 358 NTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVV 417
Query: 329 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREG 388
AN++ GLAA +FT +L + +S+AL+ G V VN + +PFGG K SG GRE
Sbjct: 418 GRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGREL 477
Query: 389 SKYGMDEFLEIKYVCL 404
+YG+ + E+K V +
Sbjct: 478 GEYGLQAYTEVKTVTV 493
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/377 (40%), Positives = 220/377 (58%), Gaps = 6/377 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGE-IIPATL--PDRRLFVLKQPVGVAGAITPWNFPLAMIT 88
++D A E+YA A+ + + P L + +VL++P+GV G ITPWN+PL M
Sbjct: 123 DMDDVAGCFEYYAGLAEALDSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAI 182
Query: 89 RKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSP 148
KV PALA GC ++KPSE G+P G +N++ G P+ G L + P
Sbjct: 183 WKVAPALAAGCAAILKPSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHP 242
Query: 149 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD-LNVAVNGALAAKFR 207
V KI+FTGS G K+M AA VK VSL LGG +P +VFDD D L++A L F
Sbjct: 243 HVDKISFTGSGPTGSKIMTAAAQLVKPVSLALGGKSPIVVFDDIDNLDIAAEWTLFGIFA 302
Query: 208 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 267
N+GQ C +R++VQE I F D K KN+K+ D E GP+++ EKV F
Sbjct: 303 NTGQVCSATSRLIVQENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKF 362
Query: 268 VEDAVSKGAKVLLGGRR-HSLGMTFY-EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325
+ +A S+GA +L GG R L +Y +PT++++V + M + +EEVFGPV + FKTEE
Sbjct: 363 ISNAKSEGATILCGGERPQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEE 422
Query: 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG 385
+AI +ANDT GL A + + +++R R ++A + G++ +N + P+GG K+SG G
Sbjct: 423 QAIELANDTKYGLGAAVMSKDVKRCERFTKAFQTGIIWINCSQPTFNELPWGGKKRSGFG 482
Query: 386 REGSKYGMDEFLEIKYV 402
R+ K+G++ FL IK V
Sbjct: 483 RDLGKWGLENFLNIKQV 499
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/377 (39%), Positives = 218/377 (57%), Gaps = 4/377 (1%)
Query: 30 LREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 89
L ++D K + +YA A + +G+ IP D + +PVGV G I PWNFPL M
Sbjct: 119 LVDLDMVLKCLRYYAGWADKYHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAW 177
Query: 90 KVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQ 149
K+GPALA G VV+K +E TP G PPGVVN+V G P G A+ +
Sbjct: 178 KLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHED 237
Query: 150 VRKITFTGSTAVGKKL-MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
V K+ FTGST +G+ + +A + +K+V+LELGG +P I+ DAD++ AV A A F N
Sbjct: 238 VDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFN 297
Query: 209 SGQTCVCA-NRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 267
GQ C CA +R VQE IY++F + K+ VG+ F QGP +++ +K+ +
Sbjct: 298 QGQ-CXCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGY 356
Query: 268 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
+ +GAK+L GG + F +PTV +V+ M +++EE+FGPV +L FKT EE
Sbjct: 357 INTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEV 416
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE 387
+ AN++ GLAA +FT +L + +S+AL+ G V VN + +PFGG K SG GRE
Sbjct: 417 VGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRE 476
Query: 388 GSKYGMDEFLEIKYVCL 404
+YG+ + E+K V +
Sbjct: 477 LGEYGLQAYTEVKTVTV 493
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 259 bits (661), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/377 (39%), Positives = 218/377 (57%), Gaps = 4/377 (1%)
Query: 30 LREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 89
L ++D K + +YA A + +G+ IP D + +PVGV G I PWNFPL M
Sbjct: 119 LVDLDMVLKCLRYYAGWADKYHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAW 177
Query: 90 KVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQ 149
K+GPALA G VV+K +E TP G PPGVVN+V G P G A+ +
Sbjct: 178 KLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHED 237
Query: 150 VRKITFTGSTAVGKKL-MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
V K+ FTGST +G+ + +A + +K+V+LELGG +P I+ DAD++ AV A A F N
Sbjct: 238 VDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFN 297
Query: 209 SGQTCVCA-NRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 267
GQ C CA +R VQE IY++F + K+ VG+ F QGP +++ +K+ +
Sbjct: 298 QGQ-CSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGY 356
Query: 268 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
+ +GAK+L GG + F +PTV +V+ M +++EE+FGPV +L FKT EE
Sbjct: 357 INTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEV 416
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE 387
+ AN++ GLAA +FT +L + +S+AL+ G V VN + +PFGG K SG GRE
Sbjct: 417 VGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRE 476
Query: 388 GSKYGMDEFLEIKYVCL 404
+YG+ + E+K V +
Sbjct: 477 LGEYGLQAYTEVKTVTV 493
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 145/368 (39%), Positives = 211/368 (57%), Gaps = 2/368 (0%)
Query: 30 LREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 89
L ++D K + +YA A + +G+ IP D + +PVGV G I PWNFPL M
Sbjct: 119 LVDLDMVLKCLRYYAGWADKYHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAW 177
Query: 90 KVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQ 149
K+GPALA G VV+K +E TP G PPGVVN+V G P G A+ +
Sbjct: 178 KLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHED 237
Query: 150 VRKITFTGSTAVGKKL-MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
V K+ FTGST +G+ + +A + +K+V+LELGG +P I+ DAD++ AV A A F N
Sbjct: 238 VDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFN 297
Query: 209 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 268
GQ C +R VQE IY++F + K+ VG+ F QGP +++ +K+ ++
Sbjct: 298 QGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYI 357
Query: 269 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 328
+GAK+L GG + F +PTV +V+ M +++EE+FGPV +L FKT EE +
Sbjct: 358 NTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVV 417
Query: 329 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREG 388
AN++ GLAA +FT +L + +S+AL+ G V VN + +PFGG K SG GRE
Sbjct: 418 GRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGREL 477
Query: 389 SKYGMDEF 396
+YG+ +
Sbjct: 478 GEYGLQAY 485
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 256 bits (655), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 146/376 (38%), Positives = 213/376 (56%), Gaps = 2/376 (0%)
Query: 30 LREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 89
L ++D K + +YA A + +G+ IP D + +PVGV G I PWNFPL M
Sbjct: 118 LVDLDMVLKCLRYYAGWADKYHGKTIPID-GDYFSYTRHEPVGVCGQIIPWNFPLLMQAW 176
Query: 90 KVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQ 149
K+GPALA G VV+K +E TP G PPGVVNV+ G P G A+ +
Sbjct: 177 KLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHED 236
Query: 150 VRKITFTGSTAVGKKL-MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
V K+ FTGST VG + +A +K+V+LE+GG +P I+ DAD++ AV A A F N
Sbjct: 237 VDKVAFTGSTEVGHLIQVAAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFN 296
Query: 209 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 268
GQ C +R VQE IY +F + K+ VG+ F QGP +++ +KV ++
Sbjct: 297 QGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYI 356
Query: 269 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 328
+ +G K+L GG + F +PTV +++ M +++EE+FGPV +L FK+ EE +
Sbjct: 357 KSGKEEGLKLLCGGGAAADRGYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKSMEEVV 416
Query: 329 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREG 388
AN++ GLAA +FT +L + +S+AL+ G V VN + +PFGG K SG GRE
Sbjct: 417 GRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGREL 476
Query: 389 SKYGMDEFLEIKYVCL 404
+YG+ + E+K V +
Sbjct: 477 GEYGLQAYTEVKTVTV 492
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 255 bits (651), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 152/378 (40%), Positives = 211/378 (55%), Gaps = 5/378 (1%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
E+ + A + A +A+ + G+ DR VL++PVGV G ITPWNFP + + +V
Sbjct: 123 EIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERV 182
Query: 92 GPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
A+ GCTVV+KPSEFT GIP GV NVV G G L P V
Sbjct: 183 PWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVD 242
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
+ FTGS VG KL AA TVK+V LELGG P IVF DADL+ A +G + N+GQ
Sbjct: 243 XVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQ 302
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
C+ +R+LVQEGI + + + + GD E G I++A EKV ++V
Sbjct: 303 CCISGSRLLVQEGIRDALXERLLDISRKVAFGDPLNERTKIGAXISEAHAEKVHSYVTAG 362
Query: 272 VSKGAKVLLGGRR--HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 329
++ GA++LLGG R G+ +Y PTV + V + ++REE+FGPV L FKT +EA+
Sbjct: 363 ITSGAELLLGGERIGREAGL-YYAPTVFAGVTPDXSIAREEIFGPVLSTLTFKTADEAVA 421
Query: 330 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGS 389
+AN T GL+A +++ NL+ + + G +N + T P GG K+SGLGRE
Sbjct: 422 LANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELG 481
Query: 390 KYGMDEFLEIK--YVCLG 405
+YG DE+ + K +V LG
Sbjct: 482 RYGFDEYSQFKGVHVTLG 499
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 254 bits (649), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 207/386 (53%), Gaps = 12/386 (3%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRL-FVLKQPVGVAGAITPWNFPLAMITRK 90
++D + IE+YA A + G+ I LP + ++P+GV I WN+P + K
Sbjct: 118 DIDAAWQCIEYYAGLAPTLSGQHI--QLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWK 175
Query: 91 VGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQV 150
PALACG VV KPS TP G+P G+VNVV G A + G L P V
Sbjct: 176 CAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNV 234
Query: 151 RKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 210
K++FTGS GKK+M +A TVK V+LELGG +P ++F D +L AV GAL A F G
Sbjct: 235 AKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQG 294
Query: 211 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 270
Q C RV VQ I +F + K K + VGD G LI+K L+KV FV
Sbjct: 295 QVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQ 354
Query: 271 AVSKGAKVLLGGRRHSLGMT------FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324
A +GA+VL GG + F P VL N + +M +EE+FGPV +L F TE
Sbjct: 355 AKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTE 414
Query: 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGL 384
EE + AN+T GLA+ +FT ++ R RV+ LE G +N IS PFGG K SG
Sbjct: 415 EEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGF 474
Query: 385 GREGSKYGMDEFLEIKYVC--LGDMN 408
GRE + +D + ++K V +GD++
Sbjct: 475 GRENGQATVDYYSQLKTVIVEMGDVD 500
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/369 (39%), Positives = 213/369 (57%), Gaps = 4/369 (1%)
Query: 30 LREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 89
L ++D K + +YA A + +G+ IP D + +PVGV G I PWNFPL M
Sbjct: 119 LVDLDMVLKCLRYYAGWADKYHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAW 177
Query: 90 KVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQ 149
K+GPALA G VV+K +E TP G PPGVVN+V G P G A+ +
Sbjct: 178 KLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHED 237
Query: 150 VRKITFTGSTAVGKKL-MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
V K+ FTGST +G+ + +A + +K+V+LELGG +P I+ DAD++ AV A A F N
Sbjct: 238 VDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFN 297
Query: 209 SGQTCVCA-NRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 267
GQ C CA +R VQE IY++F + K+ VG+ F QGP +++ +K+ +
Sbjct: 298 QGQ-CSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGY 356
Query: 268 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
+ +GAK+L GG + F +PTV +V+ M +++EE+FGPV +L FKT EE
Sbjct: 357 INTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEV 416
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE 387
+ AN++ GLAA +FT +L + +S+AL+ G V VN + +PFGG K SG GRE
Sbjct: 417 VGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRE 476
Query: 388 GSKYGMDEF 396
+YG+ +
Sbjct: 477 LGEYGLQAY 485
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 251 bits (642), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 145/412 (35%), Positives = 220/412 (53%), Gaps = 8/412 (1%)
Query: 1 MYRVWEERKQKXXXXXXXXXXXXGASSLLLREVDYGAKF--IEFYAEEAKRVYGEIIP-- 56
+YR+ + +Q GA L + G ++A ++ G IP
Sbjct: 104 LYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPIN 163
Query: 57 ATLPDRRL-FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXX 115
P+R L K+PVGV G + PWN+PL M++ K LA G TVV+KP++ TP
Sbjct: 164 QARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALK 223
Query: 116 XXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA-GTVK 174
GIP GVVN++ G+ +G L P VRKI FTGST VGK +M A VK
Sbjct: 224 FAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVK 283
Query: 175 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 234
KVSLELGG +P I+F D DLN AV +++ F N G+ C+ A R+ V+E I+ +F
Sbjct: 284 KVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVV 343
Query: 235 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEP 294
+ V+ +K+G+ GP ++A L K+ + + V +GA ++ GG + F++P
Sbjct: 344 EEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQP 403
Query: 295 TVLSNVKSEMLVSREEVFGPVAPLLCFKTE--EEAIHMANDTNAGLAAYIFTNNLQRTWR 352
TV ++V+ M +++EE FGP+ + F + + AN T GLA+ +FT ++ +
Sbjct: 404 TVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALY 463
Query: 353 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404
VS+ L+ G V +N + APFGG KQSG G++ + ++E+L IK V
Sbjct: 464 VSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 251 bits (640), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 142/381 (37%), Positives = 211/381 (55%), Gaps = 9/381 (2%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
+V A+ FYAE A+ + D + ++ P G G ITPWN PL + T ++
Sbjct: 124 QVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRI 183
Query: 92 GPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
PALA G TVV+KP+E++P +PPGV N+V G + G AL+ P V
Sbjct: 184 APALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVP 243
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
+T TG T GK +M AA +K++S ELGG +P +VF DADL A++ + F +G+
Sbjct: 244 LLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGE 303
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
C ++R+LV+E I+E F + + ++VG GPLI+ L++V +VE
Sbjct: 304 RCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAG 363
Query: 272 VSKGAKVLLGGRRHSLGM--------TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323
+GA++L+GG R + PTV ++ M +++EE+FGPV + FK
Sbjct: 364 KREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKD 422
Query: 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSG 383
EEEA+ ANDT GLAAY+FT +L+R R++ LE G+V +N + PFGGVK SG
Sbjct: 423 EEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSG 482
Query: 384 LGREGSKYGMDEFLEIKYVCL 404
REG Y +D + ++K + L
Sbjct: 483 DRREGGTYALDFYTDLKTIAL 503
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 250 bits (639), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 144/412 (34%), Positives = 220/412 (53%), Gaps = 8/412 (1%)
Query: 1 MYRVWEERKQKXXXXXXXXXXXXGASSLLLREVDYGAKF--IEFYAEEAKRVYGEIIP-- 56
+YR+ + +Q GA L + G ++A ++ G IP
Sbjct: 104 LYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPIN 163
Query: 57 ATLPDRRL-FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXX 115
P+R L K+PVGV G + PWN+PL M++ K LA G TVV+KP++ TP
Sbjct: 164 QARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALK 223
Query: 116 XXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA-GTVK 174
GIP GVVN++ G+ +G L P VRKI FTGST VGK +M A VK
Sbjct: 224 FAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVK 283
Query: 175 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 234
KVSL+LGG +P I+F D DLN AV +++ F N G+ C+ A R+ V+E I+ +F
Sbjct: 284 KVSLQLGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVV 343
Query: 235 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEP 294
+ V+ +K+G+ GP ++A L K+ + + V +GA ++ GG + F++P
Sbjct: 344 EEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQP 403
Query: 295 TVLSNVKSEMLVSREEVFGPVAPLLCFKTE--EEAIHMANDTNAGLAAYIFTNNLQRTWR 352
TV ++V+ M +++EE FGP+ + F + + AN T GLA+ +FT ++ +
Sbjct: 404 TVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALY 463
Query: 353 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404
VS+ L+ G V +N + APFGG KQSG G++ + ++E+L IK V
Sbjct: 464 VSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 250 bits (639), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 204/365 (55%), Gaps = 4/365 (1%)
Query: 42 FYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTV 101
F+A + ++ LP + + P+G+ G+I PWN+PL K+ PA+ G TV
Sbjct: 133 FFAGAVRNLHAPAAGEYLPGHTSXIRRDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTV 192
Query: 102 VVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 161
V KPSE TP +P GVVNV+ G +G+AL+ P+V ++ TG A
Sbjct: 193 VFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGXVSITGDIAT 251
Query: 162 GKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLV 221
GKK++A AA TVK+ LELGG AP IV+ DADL VNG + N+GQ C A R+
Sbjct: 252 GKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYA 311
Query: 222 QEGIYEKFADAFSKAVKNLKVG-DGFGEGVVQGPLINKAALEKVETFVEDAVS-KGAKVL 279
+ GIYEK + AV ++ D E + GPLI++ ++V +FVE A K ++
Sbjct: 312 EAGIYEKLVADLTSAVSTIRYNLDDDTENEI-GPLISRRQRDRVASFVERAADQKHIEIT 370
Query: 280 LGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLA 339
GGR S F++PTV++ E + R EVFGPV + F +++A+ AND++ GLA
Sbjct: 371 TGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLA 430
Query: 340 AYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEI 399
+ ++T ++ + R + L+YG +N T P GG+KQSG G++ S Y ++++ +
Sbjct: 431 SSVWTKDISKAXRAASRLQYGCTWINTHFXLTNEXPHGGIKQSGYGKDXSVYALEDYTAV 490
Query: 400 KYVCL 404
+++ +
Sbjct: 491 RHIXI 495
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 250 bits (638), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 148/373 (39%), Positives = 211/373 (56%), Gaps = 17/373 (4%)
Query: 38 KFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALAC 97
K FY +E + E+IP+ DR +F ++PVG+ GAITP+NFPL + K+ PA+A
Sbjct: 103 KLAAFYVKEHR---DEVIPSD--DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIAT 157
Query: 98 GCTVVVKPSEFTPXX----XXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKI 153
G +V PS P +P GV N++ G +GD ++ + +V I
Sbjct: 158 GNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMI 217
Query: 154 TFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTC 213
+FTGS+ VG+ L+ AG KK++LELGG P IV DADLN AVN + F +GQ C
Sbjct: 218 SFTGSSKVGE-LITKKAG-FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVC 275
Query: 214 VCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS 273
+ +LV E I +KF + F K L VG+ E GPLI+ E VE VE A+
Sbjct: 276 ISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAID 335
Query: 274 KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND 333
+G K+LLGG+R + PT+L V + ++ + E F PV P++ EEE I +AN
Sbjct: 336 EGGKLLLGGKRDK---ALFYPTILE-VDRDNILCKTETFAPVIPIIR-TNEEEMIDIANS 390
Query: 334 TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE-GLISTEVAPFGGVKQSGLGREGSKYG 392
T GL + IFTN++ ++ + +E LE+G V +N+ L + PFGGVK+SGLGREG KY
Sbjct: 391 TEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYA 450
Query: 393 MDEFLEIKYVCLG 405
M+E IK + +
Sbjct: 451 MEEMSNIKTIIIS 463
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 249 bits (635), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/412 (34%), Positives = 219/412 (53%), Gaps = 8/412 (1%)
Query: 1 MYRVWEERKQKXXXXXXXXXXXXGASSLLLREVDYGAKF--IEFYAEEAKRVYGEIIP-- 56
+YR+ + +Q GA L + G ++A ++ G IP
Sbjct: 104 LYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPIN 163
Query: 57 ATLPDRRL-FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXX 115
P+R L K+PVGV G + PWN+PL M++ K LA G TVV+KP++ TP
Sbjct: 164 QARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALK 223
Query: 116 XXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA-GTVK 174
GIP GVVN++ G+ +G L P VRKI FTGST VGK +M A VK
Sbjct: 224 FAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVK 283
Query: 175 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 234
KVSL LGG +P I+F D DLN AV +++ F N G+ C+ A R+ V+E I+ +F
Sbjct: 284 KVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVV 343
Query: 235 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEP 294
+ V+ +K+G+ GP ++A L K+ + + V +GA ++ GG + F++P
Sbjct: 344 EEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQP 403
Query: 295 TVLSNVKSEMLVSREEVFGPVAPLLCFKTE--EEAIHMANDTNAGLAAYIFTNNLQRTWR 352
TV ++V+ M +++EE FGP+ + F + + AN T GLA+ +FT ++ +
Sbjct: 404 TVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALY 463
Query: 353 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404
VS+ L+ G V +N + APFGG KQSG G++ + ++E+L IK V
Sbjct: 464 VSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 249 bits (635), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/342 (38%), Positives = 192/342 (56%), Gaps = 4/342 (1%)
Query: 65 FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXG 124
V+K+ +GV+G ITPWNFP + K+ A A G VV+KPSE TP G
Sbjct: 134 LVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVG 193
Query: 125 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNA 184
+P GV N+V G+ +G+ L P+VR +FTGS G K+ AA KKVSLELGG +
Sbjct: 194 VPKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSKIXEKAAKDFKKVSLELGGKS 253
Query: 185 PCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 244
P IV DD D+ A N+GQ C RVLV I + F + ++VG+
Sbjct: 254 PYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGN 313
Query: 245 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT---FYEPTVLSNVK 301
+G GP+I+K ++V+ ++ + +GA++ GG G+ F PT+ NV
Sbjct: 314 PREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVD 373
Query: 302 SEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGL 361
++ +++EE+FGPV ++ + +EAI +ANDT GLA Y+ + + +V+ ++E G
Sbjct: 374 NQXTIAQEEIFGPVXSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGT 433
Query: 362 VGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403
V +NE ++ PFGG KQSGLGRE YG++EFLE+K +
Sbjct: 434 VEINEAGRKPDL-PFGGYKQSGLGREWGDYGIEEFLEVKSIA 474
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 248 bits (633), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 134/362 (37%), Positives = 199/362 (54%), Gaps = 2/362 (0%)
Query: 42 FYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTV 101
F+A A+ + G L + + P+GV +I PWN+PL M K+ PALA G V
Sbjct: 131 FFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCV 190
Query: 102 VVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 161
V+KPSE TP P GVVN++ G +GD L P+VR ++ TGS A
Sbjct: 191 VLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIAT 249
Query: 162 GKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLV 221
G+ +++ A ++K+ +ELGG AP IVFDDAD+ V G + N+GQ C A R+
Sbjct: 250 GEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYA 309
Query: 222 QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGA-KVLL 280
Q+GIY+ + AV LK G E GPL + A LE+V VE+A + G KV+
Sbjct: 310 QKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVIT 369
Query: 281 GGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAA 340
GG + +Y PT+L+ + + ++EVFGPV + F EE+ ++ AND+ GLA+
Sbjct: 370 GGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLAS 429
Query: 341 YIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 400
++T ++ R RVS L+YG VN + P GG K SG G++ S YG++++ ++
Sbjct: 430 SVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVR 489
Query: 401 YV 402
+V
Sbjct: 490 HV 491
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 248 bits (633), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 144/412 (34%), Positives = 219/412 (53%), Gaps = 8/412 (1%)
Query: 1 MYRVWEERKQKXXXXXXXXXXXXGASSLLLREVDYGAKF--IEFYAEEAKRVYGEIIP-- 56
+YR+ + +Q GA L + G ++A ++ G IP
Sbjct: 104 LYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPIN 163
Query: 57 ATLPDRRL-FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXX 115
P+R L K+PVGV G + PWN+PL M++ K LA G TVV+KP++ TP
Sbjct: 164 QARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALK 223
Query: 116 XXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA-GTVK 174
GIP GVVN++ G+ +G L P VRKI FTGST VGK +M A VK
Sbjct: 224 FAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVK 283
Query: 175 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 234
KVSLELGG +P I+F D DLN AV +++ F N G+ + A R+ V+E I+ +F
Sbjct: 284 KVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVV 343
Query: 235 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEP 294
+ V+ +K+G+ GP ++A L K+ + + V +GA ++ GG + F++P
Sbjct: 344 EEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQP 403
Query: 295 TVLSNVKSEMLVSREEVFGPVAPLLCFKTE--EEAIHMANDTNAGLAAYIFTNNLQRTWR 352
TV ++V+ M +++EE FGP+ + F + + AN T GLA+ +FT ++ +
Sbjct: 404 TVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALY 463
Query: 353 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404
VS+ L+ G V +N + APFGG KQSG G++ + ++E+L IK V
Sbjct: 464 VSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 248 bits (633), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 144/412 (34%), Positives = 219/412 (53%), Gaps = 8/412 (1%)
Query: 1 MYRVWEERKQKXXXXXXXXXXXXGASSLLLREVDYGAKF--IEFYAEEAKRVYGEIIP-- 56
+YR+ + +Q GA L + G ++A ++ G IP
Sbjct: 104 LYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPIN 163
Query: 57 ATLPDRRL-FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXX 115
P+R L K+PVGV G + PWN+PL M++ K LA G TVV+KP++ TP
Sbjct: 164 QARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALK 223
Query: 116 XXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA-GTVK 174
GIP GVVN++ G+ +G L P VRKI FTGST VGK +M A VK
Sbjct: 224 FAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVK 283
Query: 175 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 234
KVSLELGG +P I+F D DLN AV +++ F N G+ + A R+ V+E I+ +F
Sbjct: 284 KVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENSIAAGRLFVEESIHNQFVQKVV 343
Query: 235 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEP 294
+ V+ +K+G+ GP ++A L K+ + + V +GA ++ GG + F++P
Sbjct: 344 EEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQP 403
Query: 295 TVLSNVKSEMLVSREEVFGPVAPLLCFKTE--EEAIHMANDTNAGLAAYIFTNNLQRTWR 352
TV ++V+ M +++EE FGP+ + F + + AN T GLA+ +FT ++ +
Sbjct: 404 TVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALY 463
Query: 353 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404
VS+ L+ G V +N + APFGG KQSG G++ + ++E+L IK V
Sbjct: 464 VSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/412 (34%), Positives = 218/412 (52%), Gaps = 8/412 (1%)
Query: 1 MYRVWEERKQKXXXXXXXXXXXXGASSLLLREVDYGAKF--IEFYAEEAKRVYGEIIP-- 56
+YR+ + +Q GA L + G ++A ++ G IP
Sbjct: 104 LYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPIN 163
Query: 57 ATLPDRRL-FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXX 115
P+R L K+PVGV G + PWN+PL M++ K LA G TVV+KP++ TP
Sbjct: 164 QARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALK 223
Query: 116 XXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA-GTVK 174
GIP GVVN++ G+ +G L P VRKI FTGST VGK +M A VK
Sbjct: 224 FAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVK 283
Query: 175 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 234
KVSL LGG +P I+F D DLN AV +++ F N G+ + A R+ V+E I+ +F
Sbjct: 284 KVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVV 343
Query: 235 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEP 294
+ V+ +K+G+ GP ++A L K+ + + V +GA ++ GG + F++P
Sbjct: 344 EEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQP 403
Query: 295 TVLSNVKSEMLVSREEVFGPVAPLLCFKTE--EEAIHMANDTNAGLAAYIFTNNLQRTWR 352
TV ++V+ M +++EE FGP+ + F + + AN T GLA+ +FT ++ +
Sbjct: 404 TVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALY 463
Query: 353 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404
VS+ L+ G V +N + APFGG KQSG G++ + ++E+L IK V
Sbjct: 464 VSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 245 bits (626), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/385 (36%), Positives = 210/385 (54%), Gaps = 10/385 (2%)
Query: 31 REVDY--GAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88
R VD GA +E+YA + GE IP ++ ++P+GV I WN+P+ +
Sbjct: 102 RSVDIVTGADVLEYYAGLVPAIEGEQIPLR-ETSFVYTRREPLGVVAGIGAWNYPVQIAL 160
Query: 89 RKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSP 148
K PALA G ++ KPSE TP G+P GV NV+ G+ ++G L P
Sbjct: 161 WKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHP 220
Query: 149 QVRKITFTGSTAVGKKLMAGA-AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR 207
+ KI+FTG T+ GKK+MA A + ++K+V++ELGG +P I+F DADL+ A + A+ A F
Sbjct: 221 LIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFF 280
Query: 208 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 267
+SGQ C RV + +F + V+ +++GD E GPL++ +E V +
Sbjct: 281 SSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGY 340
Query: 268 VEDAVSKGAKVLLGGRRHSLGM----TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323
+E ++ A++L GG R + G + PTV ++ + +M + REE+FGPV +L +
Sbjct: 341 IESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDD 400
Query: 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSG 383
E+EAI ANDT GLAA + T +L R R LE G+ +N S P GG KQSG
Sbjct: 401 EDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSG 460
Query: 384 LGREGSKYGMDEFLEIKYVC--LGD 406
+GRE + + IK V LGD
Sbjct: 461 VGRENGLTTLAHYTRIKSVQVELGD 485
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 245 bits (626), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/385 (36%), Positives = 210/385 (54%), Gaps = 10/385 (2%)
Query: 31 REVDY--GAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88
R VD GA +E+YA + GE IP ++ ++P+GV I WN+P+ +
Sbjct: 101 RSVDIVTGADVLEYYAGLVPAIEGEQIPLR-ETSFVYTRREPLGVVAGIGAWNYPVQIAL 159
Query: 89 RKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSP 148
K PALA G ++ KPSE TP G+P GV NV+ G+ ++G L P
Sbjct: 160 WKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHP 219
Query: 149 QVRKITFTGSTAVGKKLMAGA-AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR 207
+ KI+FTG T+ GKK+MA A + ++K+V++ELGG +P I+F DADL+ A + A+ A F
Sbjct: 220 LIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFF 279
Query: 208 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 267
+SGQ C RV + +F + V+ +++GD E GPL++ +E V +
Sbjct: 280 SSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGY 339
Query: 268 VEDAVSKGAKVLLGGRRHSLGM----TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323
+E ++ A++L GG R + G + PTV ++ + +M + REE+FGPV +L +
Sbjct: 340 IESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDD 399
Query: 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSG 383
E+EAI ANDT GLAA + T +L R R LE G+ +N S P GG KQSG
Sbjct: 400 EDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSG 459
Query: 384 LGREGSKYGMDEFLEIKYVC--LGD 406
+GRE + + IK V LGD
Sbjct: 460 VGRENGLTTLAHYTRIKSVQVELGD 484
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/385 (36%), Positives = 209/385 (54%), Gaps = 10/385 (2%)
Query: 31 REVDY--GAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88
R VD GA +E+YA + GE IP ++ ++P+GV I WN+P+ +
Sbjct: 101 RSVDIVTGADVLEYYAGLVPAIEGEQIPLR-ETSFVYTRREPLGVVAGIGAWNYPVQIAL 159
Query: 89 RKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSP 148
K PALA G ++ KPSE TP G+P GV NV+ G+ ++G L P
Sbjct: 160 WKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHP 219
Query: 149 QVRKITFTGSTAVGKKLMAGA-AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR 207
+ KI+FTG T+ GKK+MA A + ++K+V++ LGG +P I+F DADL+ A + A+ A F
Sbjct: 220 LIEKISFTGGTSTGKKVMASASSSSLKEVTMALGGKSPLIIFPDADLDRAADIAVMANFF 279
Query: 208 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 267
+SGQ C RV + +F + V+ +++GD E GPL++ +E V +
Sbjct: 280 SSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGY 339
Query: 268 VEDAVSKGAKVLLGGRRHSLGM----TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323
+E ++ A++L GG R + G + PTV ++ + +M + REE+FGPV +L +
Sbjct: 340 IESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDD 399
Query: 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSG 383
E+EAI ANDT GLAA + T +L R R LE G+ +N S P GG KQSG
Sbjct: 400 EDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSG 459
Query: 384 LGREGSKYGMDEFLEIKYVC--LGD 406
+GRE + + IK V LGD
Sbjct: 460 VGRENGLTTLAHYTRIKSVQVELGD 484
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 141/385 (36%), Positives = 209/385 (54%), Gaps = 10/385 (2%)
Query: 31 REVDY--GAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88
R VD GA +E+YA + GE IP ++ ++P+GV I WN+P+ +
Sbjct: 102 RSVDIVTGADVLEYYAGLVPAIEGEQIPLR-ETSFVYTRREPLGVVAGIGAWNYPVQIAL 160
Query: 89 RKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSP 148
K PALA G ++ KPSE TP G+P GV NV+ G+ ++G L P
Sbjct: 161 WKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHP 220
Query: 149 QVRKITFTGSTAVGKKLMAGA-AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR 207
+ KI+FTG T+ GKK+MA A + ++K+V++ELGG +P I+F DADL+ A + A+ A F
Sbjct: 221 LIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFF 280
Query: 208 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 267
+SGQ RV + +F + V+ +++GD E GPL++ +E V +
Sbjct: 281 SSGQVATNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGY 340
Query: 268 VEDAVSKGAKVLLGGRRHSLGM----TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323
+E ++ A++L GG R + G + PTV ++ + +M + REE+FGPV +L +
Sbjct: 341 IESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDD 400
Query: 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSG 383
E+EAI ANDT GLAA + T +L R R LE G+ +N S P GG KQSG
Sbjct: 401 EDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSG 460
Query: 384 LGREGSKYGMDEFLEIKYVC--LGD 406
+GRE + + IK V LGD
Sbjct: 461 VGRENGLTTLAHYTRIKSVQVELGD 485
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 241 bits (615), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 130/335 (38%), Positives = 193/335 (57%), Gaps = 5/335 (1%)
Query: 71 VGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVV 130
+GV G ITPWN+P+ +T KV PAL GCT+V+KPSE P +P GV
Sbjct: 162 IGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVF 221
Query: 131 NVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD 190
N++ G+ ++G L P + I+FTGST GK + A+ T+K+V LELGG I+F
Sbjct: 222 NLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFA 281
Query: 191 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 250
DAD++ A+ + F NSGQ+C R+LV++ IY+K + +VG G G
Sbjct: 282 DADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGN 340
Query: 251 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT---FYEPTVLSNVKSEMLVS 307
GP+++K +K++ ++ + +GA ++ GG +GM + PTV ++VK M +
Sbjct: 341 HIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIF 400
Query: 308 REEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG 367
REE+FGPV LL F TE+EA+ +ANDT GL YI + + + R++ + G+V VN G
Sbjct: 401 REEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVN-G 459
Query: 368 LISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402
+ FGGVK SG REG +G+ EFL+ K +
Sbjct: 460 HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAI 494
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 241 bits (615), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 141/385 (36%), Positives = 209/385 (54%), Gaps = 10/385 (2%)
Query: 31 REVDY--GAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88
R VD GA +E+YA + GE IP ++ ++P+GV I WN+P+ +
Sbjct: 102 RSVDIVTGADVLEYYAGLVPAIEGEQIPLR-ETSFVYTRREPLGVVAGIGAWNYPVQIAL 160
Query: 89 RKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSP 148
K PALA G ++ KPSE TP G+P GV NV+ G+ ++G L P
Sbjct: 161 WKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHP 220
Query: 149 QVRKITFTGSTAVGKKLMAGA-AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR 207
+ KI+FTG T+ GKK+MA A + ++K+V++ELGG +P I+F DADL+ A + A+ A F
Sbjct: 221 LIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFF 280
Query: 208 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 267
+SGQ RV + +F + V+ +++GD E GPL++ +E V +
Sbjct: 281 SSGQVXTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGY 340
Query: 268 VEDAVSKGAKVLLGGRRHSLGM----TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323
+E ++ A++L GG R + G + PTV ++ + +M + REE+FGPV +L +
Sbjct: 341 IESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDD 400
Query: 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSG 383
E+EAI ANDT GLAA + T +L R R LE G+ +N S P GG KQSG
Sbjct: 401 EDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSG 460
Query: 384 LGREGSKYGMDEFLEIKYVC--LGD 406
+GRE + + IK V LGD
Sbjct: 461 VGRENGLTTLAHYTRIKSVQVELGD 485
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 238 bits (606), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 143/379 (37%), Positives = 207/379 (54%), Gaps = 9/379 (2%)
Query: 36 GAKFIEFYAEEAKR-VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 94
GA EF+ A + G+ IP L + + P+GV I WN+P + K PA
Sbjct: 117 GADAFEFFGGIAPSALNGDYIP--LGGDFAYTKRVPLGVCVGIGAWNYPQQIACWKAAPA 174
Query: 95 LACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKIT 154
L G +V KPSE TP G+P G+ NV+ G+ D G L+ P V K++
Sbjct: 175 LVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDR-DTGPLLVNHPDVAKVS 233
Query: 155 FTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCV 214
TGS G+K+ A AAG +K V++ELGG +P IVFDDAD+ AV GA+ F +SGQ C
Sbjct: 234 LTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCS 293
Query: 215 CANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK 274
RV VQ+ +F + + + + +GD GPL++KA EKV +++E ++
Sbjct: 294 NGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAE 353
Query: 275 GAKVLLGG--RRHSLGMTFY-EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
GA ++ GG + G Y +PTV ++V +M ++REE+FGPV +L F E+E + A
Sbjct: 354 GATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARA 413
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
N T GLA +FT +L R RV + LE G + +N + PFGG KQSG GRE S
Sbjct: 414 NATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAA 473
Query: 392 GMDEFLEIK--YVCLGDMN 408
++ + E+K YV G ++
Sbjct: 474 ALEHYSELKTVYVSTGKVD 492
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 228 bits (580), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 129/374 (34%), Positives = 217/374 (58%), Gaps = 12/374 (3%)
Query: 45 EEAKRVYGEI-----IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGC 99
+EA GE+ +P+ + + + + P+GV +I+P+NFP+ + R + PA+A G
Sbjct: 113 DEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGN 172
Query: 100 TVVVKPSEFTPXXX-XXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGS 158
+VV KP T G+P GV+NV++ + +IGD +LT+P R I+FTGS
Sbjct: 173 SVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGS 232
Query: 159 TAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANR 218
TAVG+ + A K+++LELGGN P V DAD++ AV+ A+ KF + GQ C+ NR
Sbjct: 233 TAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINR 292
Query: 219 VLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKV 278
++V + +Y++F + F+ VK L GD V GPLIN+ +EK +E A + G ++
Sbjct: 293 IIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIEL 352
Query: 279 LLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGL 338
+ G+R +T P V + +++ E+F P+A ++ +++EAI MANDT GL
Sbjct: 353 AVEGKRVGNVLT---PYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGL 409
Query: 339 AAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEF 396
++ +FT++L++ + + ++ G+ VN+ + S +A FGG K SG+GR G+ + ++EF
Sbjct: 410 SSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIA-FGGNKASGVGRFGNPWVVEEF 468
Query: 397 LEIKYVCLGDMNRK 410
K++ + RK
Sbjct: 469 TVTKWISIQKQYRK 482
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 221 bits (564), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 131/360 (36%), Positives = 206/360 (57%), Gaps = 7/360 (1%)
Query: 49 RVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 108
RV+G I P+ P + V + GV G I+PWNFPL + R V PALA G VV+KP+
Sbjct: 127 RVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASD 186
Query: 109 TPXXXXXXXXXX-XXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL-- 165
TP G+P GV++ V G +IGD +T + I+FTGST VG+++
Sbjct: 187 TPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGE 246
Query: 166 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 225
+A G +K V+LELGGNAP +V DAD++ A A F + GQ C+ NRV+V +
Sbjct: 247 LAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAV 306
Query: 226 YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 285
+++F + F +AVKN+ GD EG + GP+IN + L ++ +E A +GA V + G
Sbjct: 307 HDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEG--- 363
Query: 286 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 345
+ P V S+V S+M ++REE+FGP+ +L E A +AN ++ GL+A +++
Sbjct: 364 PIEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSK 423
Query: 346 NLQRTWRVSEALEYGLVGVNEGLISTE-VAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404
++ R + + ++ G+V +N+ ++ E FGG K SGLGR + ++EF +++ +
Sbjct: 424 DIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGI 483
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 221 bits (562), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 196/342 (57%), Gaps = 4/342 (1%)
Query: 65 FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXG 124
V ++PVGV GAI WN PL + K+ PAL GCT+V+KP+ TP G
Sbjct: 141 IVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVG 200
Query: 125 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNA 184
+P GV++VV G + G AL ++P + TFTGS+AVG+++ AA +K +LELGG +
Sbjct: 201 LPEGVLSVVPGGI-ETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKS 259
Query: 185 PCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 244
I+ +D DL A+ + + N+GQ CV R+L Y++ A + V L VG
Sbjct: 260 AAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGP 319
Query: 245 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLL-GGRRHSLGMTFY-EPTVLSNVKS 302
GPLI++ +VE ++ + +GA+++ GGR L F+ +PTV ++V +
Sbjct: 320 PSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDN 379
Query: 303 EMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLV 362
+M +++EE+FGPV ++ + TEE+AI +AND+ GLA ++T ++ + ++S+ + G
Sbjct: 380 KMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTY 439
Query: 363 GVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404
G+N +PFGG K SG+GRE G++ F + K V L
Sbjct: 440 GINWYAFDPG-SPFGGYKNSGIGRENGPEGVEHFTQQKSVLL 480
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/371 (34%), Positives = 191/371 (51%), Gaps = 2/371 (0%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
EV A ++YAE P + +++ + +P+GV AI PWNFPL + R
Sbjct: 89 EVTKSAALCDWYAEHGPAXLNPE-PTLVENQQAVIEYRPLGVILAIXPWNFPLWQVLRGA 147
Query: 92 GPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
P L G + ++K + G P GV V N + + P++
Sbjct: 148 VPILLAGNSYLLKHAPNVTGCAQXIARILAEAGTPAGVYGWVNANNEGVSQXI-NDPRIA 206
Query: 152 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
+T TGS G + A A +KK LELGG+ P IV +DADL +AV A+A +++N+GQ
Sbjct: 207 AVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQ 266
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
C A R +V+EGI + F D F A LK GD E GP +++ V+ +
Sbjct: 267 VCAAAKRFIVEEGIAQAFTDRFVAAAAALKXGDPLVEENDLGPXARFDLRDELHQQVQAS 326
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
V++GA++LLGG + + +Y TVL++V + R+E+FGPVA + K A+ +A
Sbjct: 327 VAEGARLLLGGEKIAGEGNYYAATVLADVTPDXTAFRQELFGPVAAITVAKDAAHALALA 386
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 391
ND+ GL+A IFT + + LE G V +N S FGGVK+SG GRE S +
Sbjct: 387 NDSEFGLSATIFTADDTLAAEXAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHF 446
Query: 392 GMDEFLEIKYV 402
G+ EF ++ V
Sbjct: 447 GLHEFCNVQTV 457
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 197 bits (502), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 124/381 (32%), Positives = 192/381 (50%), Gaps = 12/381 (3%)
Query: 30 LREVDYGAKFIEFYAEEAKRVYGEIIP-----ATLPDRRLFVLKQPVGVAGAITPWNFPL 84
+ EV A+ I + AEE R+ GE++ A + V ++PVG+ AI+P+N+P+
Sbjct: 98 VSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV 157
Query: 85 AMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDAL 144
+ K+ PAL G + KP G+P GV N + G +IGD +
Sbjct: 158 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYI 217
Query: 145 LTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA 204
+ V I FTGST +G+++ G ++ + LELGG IV +DADL + +A
Sbjct: 218 VEHQAVNFINFTGSTGIGERI--GKMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAG 275
Query: 205 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 264
F SGQ C RVLV E + ++ + + V L +G+ + + PLI+ + + V
Sbjct: 276 AFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADIT-PLIDTKSADYV 334
Query: 265 ETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324
E + DA KGA L +R P + V ++M ++ EE FGPV P++ +
Sbjct: 335 EGLINDANDKGATALTEIKREG---NLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSV 391
Query: 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSG 383
EEAI ++N + GL A IFTN+ R + ++E LE G V +N T+ PF G K+SG
Sbjct: 392 EEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSG 451
Query: 384 LGREGSKYGMDEFLEIKYVCL 404
G +G KY ++ +K V
Sbjct: 452 AGIQGVKYSIEAMTTVKSVVF 472
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 192/381 (50%), Gaps = 12/381 (3%)
Query: 30 LREVDYGAKFIEFYAEEAKRVYGEIIP-----ATLPDRRLFVLKQPVGVAGAITPWNFPL 84
+ EV A+ I + AEE R+ GE++ A + V ++PVG+ AI+P+N+P+
Sbjct: 98 VSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV 157
Query: 85 AMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDAL 144
+ K+ PAL G + KP G+P GV N + G +IGD +
Sbjct: 158 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYI 217
Query: 145 LTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA 204
+ V I F+GST +G+++ G ++ + LELGG IV +DADL + +A
Sbjct: 218 VEHQAVNFINFSGSTGIGERI--GKMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAG 275
Query: 205 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 264
F SGQ C RVLV E + ++ + + V L +G+ + + PLI+ + + V
Sbjct: 276 AFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADIT-PLIDTKSADYV 334
Query: 265 ETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324
E + DA KGA L +R P + V ++M ++ EE FGPV P++ +
Sbjct: 335 EGLINDANDKGATALTEIKREG---NLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSV 391
Query: 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSG 383
EEAI ++N + GL A IFTN+ R + ++E LE G V +N T+ PF G K+SG
Sbjct: 392 EEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSG 451
Query: 384 LGREGSKYGMDEFLEIKYVCL 404
G +G KY ++ +K V
Sbjct: 452 AGIQGVKYSIEAMTTVKSVVF 472
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 191/381 (50%), Gaps = 12/381 (3%)
Query: 30 LREVDYGAKFIEFYAEEAKRVYGEIIP-----ATLPDRRLFVLKQPVGVAGAITPWNFPL 84
+ EV A+ I + AEE R+ GE++ A + V ++PVG+ AI+P+N+P+
Sbjct: 98 VSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV 157
Query: 85 AMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDAL 144
+ K+ PAL G + KP G+P GV N + G +IGD +
Sbjct: 158 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYI 217
Query: 145 LTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA 204
+ V I FTGST +G+++ G ++ + L LGG IV +DADL + +A
Sbjct: 218 VEHQAVNFINFTGSTGIGERI--GKMAGMRPIMLALGGKDSAIVLEDADLELTAKNIIAG 275
Query: 205 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 264
F SGQ C RVLV E + ++ + + V L +G+ + + PLI+ + + V
Sbjct: 276 AFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADIT-PLIDTKSADYV 334
Query: 265 ETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324
E + DA KGA L +R P + V ++M ++ EE FGPV P++ +
Sbjct: 335 EGLINDANDKGATALTEIKREG---NLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSV 391
Query: 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSG 383
EEAI ++N + GL A IFTN+ R + ++E LE G V +N T+ PF G K+SG
Sbjct: 392 EEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSG 451
Query: 384 LGREGSKYGMDEFLEIKYVCL 404
G +G KY ++ +K V
Sbjct: 452 AGIQGVKYSIEAMTTVKSVVF 472
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 191/381 (50%), Gaps = 12/381 (3%)
Query: 30 LREVDYGAKFIEFYAEEAKRVYGEIIP-----ATLPDRRLFVLKQPVGVAGAITPWNFPL 84
+ EV A+ I + AEE R+ GE++ A + V ++PVG+ AI+P+N+P+
Sbjct: 98 VSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV 157
Query: 85 AMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDAL 144
+ K+ PAL G + KP G+P GV N + G +IGD +
Sbjct: 158 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYI 217
Query: 145 LTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA 204
+ V I FTGST +G+++ G ++ + LELGG IV +DADL + +A
Sbjct: 218 VEHQAVNFINFTGSTGIGERI--GKMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAG 275
Query: 205 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 264
F SGQ RVLV E + ++ + + V L +G+ + + PLI+ + + V
Sbjct: 276 AFGYSGQRSTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADIT-PLIDTKSADYV 334
Query: 265 ETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324
E + DA KGA L +R P + V ++M ++ EE FGPV P++ +
Sbjct: 335 EGLINDANDKGATALTEIKREG---NLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSV 391
Query: 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSG 383
EEAI ++N + GL A IFTN+ R + ++E LE G V +N T+ PF G K+SG
Sbjct: 392 EEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSG 451
Query: 384 LGREGSKYGMDEFLEIKYVCL 404
G +G KY ++ +K V
Sbjct: 452 AGIQGVKYSIEAMTTVKSVVF 472
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 185 bits (469), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 127/368 (34%), Positives = 187/368 (50%), Gaps = 18/368 (4%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATL-----PDRRLFVLKQPVGVAGAITPWNFPLAM 86
EV A I A+EA R+ GE + + V ++P+GV AI+P+N+P+ +
Sbjct: 109 EVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNL 168
Query: 87 ITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLT 146
K+ PAL G TVV KP+ G P G++ VV G IGD L+
Sbjct: 169 AAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVE 228
Query: 147 SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKF 206
P + ITFTG T G+++ A + V LELGG P IV DDADL + + ++ F
Sbjct: 229 HPGIDMITFTGGTTTGERISEKA--KMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAF 286
Query: 207 RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVET 266
SGQ C RV VQ+ + ++ + V+ L VG + + P+I++ + ++
Sbjct: 287 SYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPEDDADIT-PVIDEKSAAFIQG 345
Query: 267 FVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326
++DA+ GA +L G +R PT+L +V M V+ EE FGPV P++ K E
Sbjct: 346 LIDDALENGATLLSGNKRQG---NLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANE 402
Query: 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA----PFGGVKQS 382
AI ++N ++ GL A IFT + R + + LE G V +N TE PF GVK+S
Sbjct: 403 AISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINA---KTERGPDHFPFLGVKKS 459
Query: 383 GLGREGSK 390
GLG +G K
Sbjct: 460 GLGVQGIK 467
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 188/358 (52%), Gaps = 3/358 (0%)
Query: 30 LREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 89
L EV G + +EF A + G+ + + D + P+GV G I P+NFP+ +
Sbjct: 101 LGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCW 160
Query: 90 KVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQ 149
A+A G T ++KPSE TP G+P GV NVV G A D+ + +L P+
Sbjct: 161 MFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPE 219
Query: 150 VRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNS 209
++ I+F GS VG+ + + +K+V G IV +DA+L V + A F ++
Sbjct: 220 IKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSA 279
Query: 210 GQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 269
G+ C+ V V+EGI ++F + V ++K+G+G +GV GP+I + ++ +++E
Sbjct: 280 GERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIE 339
Query: 270 DAVSKGAKVLLGGRRH-SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 328
+ +GA+++ GR + S F PT+ NV +EM + ++E+F PV ++ K +EAI
Sbjct: 340 KGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAI 399
Query: 329 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG 385
+AN + A +FT+N E ++ G++G+N G+ + PF G K S G
Sbjct: 400 EIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFG 457
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/368 (32%), Positives = 194/368 (52%), Gaps = 15/368 (4%)
Query: 46 EAKRVYGEIIPATLPDRRL----FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTV 101
+ K++ G+ IP L V ++P+GV AITP+N+PL K+ + G V
Sbjct: 129 DLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAV 188
Query: 102 VVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAP-DIGDALLTSPQVRKITFTGSTA 160
VVKPS P G PP + ++ N P + ++ +V ++FTGST
Sbjct: 189 VVKPSISDPLPAAMAVKALLDAGFPPDAIALL--NLPGKEAEKIVADDRVAAVSFTGSTE 246
Query: 161 VGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL 220
VG++++ G VK+ +ELGG P IV +DADL++A + + +GQ C VL
Sbjct: 247 VGERVVK--VGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVL 304
Query: 221 VQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLL 280
+ +Y K + +K + +L+VGD V GPLI+ +A++++ +EDAV KG +VL
Sbjct: 305 AERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLA 364
Query: 281 GGRRHSLGMTFYEPTVL---SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG 337
GGRR LG T+ +PT++ ++ +M++ + EVF PVA + K ++AI +AN G
Sbjct: 365 GGRR--LGPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYG 422
Query: 338 LAAYIFTNNLQRTWRVSEALEYGLVGVNE-GLISTEVAPFGGVKQSGLGREGSKYGMDEF 396
L A +F ++ + R LE G + +N+ PFGG K+SG+ REG Y ++
Sbjct: 423 LDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAV 482
Query: 397 LEIKYVCL 404
K +
Sbjct: 483 TAYKTIVF 490
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 165/333 (49%), Gaps = 1/333 (0%)
Query: 65 FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXG 124
+ LKQ GV A PWNFPL + R P G +++K + P G
Sbjct: 118 YYLKQSTGVIXACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAG 177
Query: 125 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNA 184
P G + + + + D ++ P+++ + TGS G + A +KK + ELGGN
Sbjct: 178 APEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTXELGGND 236
Query: 185 PCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 244
IV DDAD V N A+ N GQ C + R++V++ Y++ NLK GD
Sbjct: 237 AFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGD 296
Query: 245 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEM 304
P ++ A EK+E V++A+ GAKV F+ PT+L+++ +
Sbjct: 297 PLEADTTLPPXNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDN 356
Query: 305 LVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGV 364
V +EVFGP+A + + + AI +AND++ GL + + +++ R +VS +E G +
Sbjct: 357 PVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGXTVI 416
Query: 365 NEGLISTEVAPFGGVKQSGLGREGSKYGMDEFL 397
N I++ PFGG+K+SG GRE S G+ F+
Sbjct: 417 NGRWITSGELPFGGIKKSGYGRELSGLGLXAFV 449
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 181 bits (460), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 121/368 (32%), Positives = 194/368 (52%), Gaps = 15/368 (4%)
Query: 46 EAKRVYGEIIPATLPDRRL----FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTV 101
+ K++ G+ IP L V ++P+GV AITP+N+PL K+ + G V
Sbjct: 129 DLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAV 188
Query: 102 VVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAP-DIGDALLTSPQVRKITFTGSTA 160
VVKPS P G PP + ++ N P + ++ +V ++FTGST
Sbjct: 189 VVKPSISDPLPAAMAVKALLDAGFPPDAIALL--NLPGKEAEKIVADDRVAAVSFTGSTE 246
Query: 161 VGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL 220
VG++++ G VK+ +ELGG P IV +DADL++A + + +GQ C VL
Sbjct: 247 VGERVVK--VGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVL 304
Query: 221 VQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLL 280
+ +Y K + +K + +L+VGD V GPLI+ +A++++ +EDAV KG +VL
Sbjct: 305 AERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLA 364
Query: 281 GGRRHSLGMTFYEPTVL---SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG 337
GGRR LG T+ +PT++ ++ +M++ + EVF PVA + K ++AI +AN G
Sbjct: 365 GGRR--LGPTYVQPTLVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYG 422
Query: 338 LAAYIFTNNLQRTWRVSEALEYGLVGVNE-GLISTEVAPFGGVKQSGLGREGSKYGMDEF 396
L A +F ++ + R LE G + +N+ PFGG K+SG+ REG Y ++
Sbjct: 423 LDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAV 482
Query: 397 LEIKYVCL 404
K +
Sbjct: 483 TAYKTIVF 490
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 121/368 (32%), Positives = 193/368 (52%), Gaps = 15/368 (4%)
Query: 46 EAKRVYGEIIPATLPDRRL----FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTV 101
+ K++ G+ IP L V ++P+GV AITP+N+PL K+ + G V
Sbjct: 129 DLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAV 188
Query: 102 VVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAP-DIGDALLTSPQVRKITFTGSTA 160
VVKPS P G PP + ++ N P + ++ +V ++FTGST
Sbjct: 189 VVKPSISDPLPAAMAVKALLDAGFPPDAIALL--NLPGKEAEKIVADDRVAAVSFTGSTE 246
Query: 161 VGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL 220
VG++++ G VK+ +ELGG P IV +DADL++A + + +GQ C VL
Sbjct: 247 VGERVVK--VGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVL 304
Query: 221 VQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLL 280
+ +Y K + +K + +L+VGD V GPLI+ +A++++ +EDAV KG +VL
Sbjct: 305 AERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLA 364
Query: 281 GGRRHSLGMTFYEPTVL---SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG 337
GGRR LG T+ +PT + ++ +M++ + EVF PVA + K ++AI +AN G
Sbjct: 365 GGRR--LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYG 422
Query: 338 LAAYIFTNNLQRTWRVSEALEYGLVGVNE-GLISTEVAPFGGVKQSGLGREGSKYGMDEF 396
L A +F ++ + R LE G + +N+ PFGG K+SG+ REG Y ++
Sbjct: 423 LDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAV 482
Query: 397 LEIKYVCL 404
K +
Sbjct: 483 TAYKTIVF 490
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 183/372 (49%), Gaps = 16/372 (4%)
Query: 39 FIEFYAEEAKRVY--GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 96
F+E+YA + + EI+ R F P+GV I+PWNF LA++ +
Sbjct: 141 FLEYYARQMIELNRGKEILSRPGEQNRYFYT--PMGVTVTISPWNFALAIMVGTAVAPIV 198
Query: 97 CGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFT 156
G TVV+KP+ TP G+P GV+N V G+ ++GD L+ P+ ITFT
Sbjct: 199 TGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFT 258
Query: 157 GSTAVGKKLMAGAA------GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 210
GS VG +L AA +K+V +E+GG +V DADL++A L + F SG
Sbjct: 259 GSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSG 318
Query: 211 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 270
Q C +R ++ + +Y++ + KNL VGD GP+I++ A EK+ +++E
Sbjct: 319 QKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEI 378
Query: 271 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 330
+G +++ GG S F +PT+++++ E ++ +EE+FGPV + A+ +
Sbjct: 379 GKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEI 437
Query: 331 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLGREG 388
AN+T GL + T N + G + N V PFGG K SG
Sbjct: 438 ANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGT---D 494
Query: 389 SKYGMDEFLEIK 400
SK G ++L +
Sbjct: 495 SKAGGPDYLALH 506
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 178/358 (49%), Gaps = 8/358 (2%)
Query: 47 AKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPS 106
++ + G ++P+ P L PVG+ G IT +NFP+A+ AL CG + K +
Sbjct: 132 SRMIGGPVLPSERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGA 191
Query: 107 EFTPXXXXXXXXXXX----XXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 162
TP +P + ++ G A DIG A+ +V ++FTGST VG
Sbjct: 192 PTTPLTSVAVTKIVAEVLEQNNLPGAICSMTCGGA-DIGTAMAKDERVDLLSFTGSTHVG 250
Query: 163 KKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQ 222
K + + LELGGN IVF+DADLN+ V A+ A +GQ C R+++
Sbjct: 251 KMVAMMVQERFGRKLLELGGNNAIIVFEDADLNLVVPSAVFASVGTAGQRCTTTRRLMLH 310
Query: 223 EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 282
E +++ + +KA K +++GD + + GPL K A+++ +E A +G ++ GG
Sbjct: 311 ESVHDAVVERIAKAYKQVRIGDPWDPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGG 370
Query: 283 RRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYI 342
+ + EPT+++ + + + E F P+ +L FKTEEEA N+ GL++ I
Sbjct: 371 KVMDRPGNYVEPTIITGLAHDAPIVHTETFVPILYVLKFKTEEEAFAWNNEVQQGLSSSI 430
Query: 343 FTNNLQRT--WRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREGSKYGMDEFL 397
FT +L R W + + G+V VN E+ FGG K +G GRE +++
Sbjct: 431 FTKDLGRVFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDSWKQYM 488
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 119/376 (31%), Positives = 184/376 (48%), Gaps = 28/376 (7%)
Query: 29 LLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRR--LFVLKQPVGVAGAITPWNFPLAM 86
+L E+D K + +AE+ E + T ++ L++ +P+GV I WN+P +
Sbjct: 66 VLEELDTTIKELPDWAED------EPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNL 119
Query: 87 ITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLT 146
+ + A+A G V++KPSE + + + VV G P+ + L
Sbjct: 120 TIQPMVGAVAAGNAVILKPSEVS-GHMADLLATLIPQYMDQNLYLVVKGGVPETTE--LL 176
Query: 147 SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKF 206
+ I +TGSTAVGK +MA AA + V+LELGG +PC V D DL+VA KF
Sbjct: 177 KERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF 236
Query: 207 RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ----GPLINKAALE 262
NSGQTCV + +L I + + K++K D +GE Q G +IN +
Sbjct: 237 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLK-----DFYGEDAKQSRDYGRIINDRHFQ 291
Query: 263 KVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322
+V+ +++ KV GG + PT+L +V + V +EE+FGPV P++C +
Sbjct: 292 RVKGLIDN-----QKVAHGGTWDQ-SSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVR 345
Query: 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVK 380
+ EEAI N LA Y+F+NN + ++ G V N+ ++ V PFGGV
Sbjct: 346 SLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVG 405
Query: 381 QSGLGREGSKYGMDEF 396
SG+G K + F
Sbjct: 406 NSGMGAYHGKKSFETF 421
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 180/371 (48%), Gaps = 14/371 (3%)
Query: 39 FIEFYAEEA-KRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALAC 97
F+E+YA + + G+ + + +R +V P GV I PWNF A++ +
Sbjct: 141 FMEYYARQMIELAKGKPVNSREGERNQYVY-TPTGVTVVIPPWNFLFAIMAGTTVAPIVT 199
Query: 98 GCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTG 157
G TVV+KP+ P G+P GVVN V G+ ++GD L+ P+ ITFTG
Sbjct: 200 GNTVVLKPASAAPVIAAKFVEVLEESGLPKGVVNFVPGSGAEVGDYLVDHPKTSIITFTG 259
Query: 158 STAVGKKLMAGAAGT------VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 211
S VG ++ AA +K+V E+GG +V +D D+ +A + F +GQ
Sbjct: 260 SREVGTRIFERAAKVQPGQTHLKQVIAEMGGKDTVVVDEDCDIELAAQSIFTSAFGFAGQ 319
Query: 212 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 271
C +R +V E +Y++ + ++ KVG+ V GP+I++A+ K+ ++E
Sbjct: 320 KCSAGSRAVVHEKVYDEVLKRVIEITESKKVGEPDSADVYMGPVIDQASFNKIMDYIEIG 379
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 331
+G +++ GG+ F EPT+ +++ + + +EE+FGPV + +EA+ +A
Sbjct: 380 KEEG-RLVSGGKGDDSKGYFIEPTIFADLDPKARLMQEEIFGPVVAFSKVSSFDEALEVA 438
Query: 332 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLGREGS 389
N+T GL + T N R + G + N V PFGG K SG S
Sbjct: 439 NNTEYGLTGAVITKNRDHINRAKQEFHVGNLYFNRNCTGAIVGYHPFGGFKMSGT---DS 495
Query: 390 KYGMDEFLEIK 400
K G ++L +
Sbjct: 496 KAGGPDYLALH 506
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 184/377 (48%), Gaps = 16/377 (4%)
Query: 39 FIEFYAEEAKRVYG---EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 95
FIE+YA A R E++P D F + P+G I PWNFP+A+ T + +
Sbjct: 141 FIEYYARAALRYRYPAVEVVPYPGEDNESFYV--PLGAGVVIAPWNFPVAIFTGMIVGPV 198
Query: 96 ACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITF 155
A G TV+ KP+E G PPGVVN + G ++G L+ P++R I F
Sbjct: 199 AVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINF 258
Query: 156 TGSTAVGKKL------MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNS 209
TGS VG K+ +A K+ +E GG IV + AD ++A G + + +
Sbjct: 259 TGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQ 318
Query: 210 GQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 269
GQ C A+R+++ +G YE + K + L VG E GP+++ KV +++E
Sbjct: 319 GQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIE 377
Query: 270 DAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 329
++G +++LGG+R F PTV + V + +++EE+FGPV ++ K EA+
Sbjct: 378 IGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALE 436
Query: 330 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGL-GR 386
+ANDT GL +++ + G + N + V PFGG K SG +
Sbjct: 437 VANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAK 496
Query: 387 EGSKYGMDEFLEIKYVC 403
G+ + FLE+K V
Sbjct: 497 TGALDYLRLFLEMKAVA 513
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 184/377 (48%), Gaps = 16/377 (4%)
Query: 39 FIEFYAEEAKRVYG---EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 95
FIE+YA A R E++P D F + P+G I PWNFP+A+ T + +
Sbjct: 141 FIEYYARAALRYRYPAVEVVPYPGEDNESFYV--PLGAGVVIAPWNFPVAIFTGMIVGPV 198
Query: 96 ACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITF 155
A G TV+ KP+E G PPGVVN + G ++G L+ P++R I F
Sbjct: 199 AVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINF 258
Query: 156 TGSTAVGKKL------MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNS 209
TGS VG K+ +A K+ +E GG IV + AD ++A G + + +
Sbjct: 259 TGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQ 318
Query: 210 GQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 269
GQ C A+R+++ +G YE + K + L VG E GP+++ KV +++E
Sbjct: 319 GQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIE 377
Query: 270 DAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 329
++G +++LGG+R F PTV + V + +++EE+FGPV ++ K EA+
Sbjct: 378 IGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALE 436
Query: 330 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGL-GR 386
+ANDT GL +++ + G + N + V PFGG K SG +
Sbjct: 437 VANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAK 496
Query: 387 EGSKYGMDEFLEIKYVC 403
G+ + FLE+K V
Sbjct: 497 TGALDYLRLFLEMKAVA 513
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 181/371 (48%), Gaps = 18/371 (4%)
Query: 29 LLREVDYG-AKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87
+L E++Y K E+ A+E E P T D L++ +P+GV I WN+P +
Sbjct: 83 VLEEIEYMIQKLPEWAADEPV----EKTPQTQQDE-LYIHSEPLGVVLVIGTWNYPFNLT 137
Query: 88 TRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTS 147
+ + A+A G VV+KPSE + + + V+ G P+ + L
Sbjct: 138 IQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVINGGVPETTE--LLK 194
Query: 148 PQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR 207
+ I +TGST VGK +M AA + V+LELGG +PC V + DL+VA KF
Sbjct: 195 ERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFM 254
Query: 208 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 267
NSGQTCV + +L I + + K++K G+ + G +I+ ++V
Sbjct: 255 NSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGL 313
Query: 268 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327
+E G KV GG + + PT+L++V + V +EE+FGPV P++C ++ EEA
Sbjct: 314 IE-----GQKVAYGGTGDA-ATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEA 367
Query: 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL--ISTEVAPFGGVKQSGLG 385
I N LA Y+F++N + ++ G V N+ + I+ PFGGV SG+G
Sbjct: 368 IQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMG 427
Query: 386 REGSKYGMDEF 396
K + F
Sbjct: 428 SYHGKKSFETF 438
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 173/358 (48%), Gaps = 8/358 (2%)
Query: 47 AKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPS 106
++ + G I+P+ L PVG+ G IT +NFP+A+ A+ CG + K +
Sbjct: 134 SRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGA 193
Query: 107 EFTPXXXXXXXXXXXX----XGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 162
T +P + ++ G A DIG A+ +V ++FTGST VG
Sbjct: 194 PTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGA-DIGTAMAKDERVNLLSFTGSTQVG 252
Query: 163 KKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQ 222
K++ + LELGGN I F+DADL++ V AL A +GQ C A R+ +
Sbjct: 253 KQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIH 312
Query: 223 EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 282
E I+++ + KA ++VG+ + V+ GPL K A+ VE+A +G V+ GG
Sbjct: 313 ESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGG 372
Query: 283 RRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYI 342
+ + EPT+++ + + ++ E F P+ + F+ EEE N+ GL++ I
Sbjct: 373 KVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSI 432
Query: 343 FTNNLQRT--WRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREGSKYGMDEFL 397
FT +L R W + + G+V VN E+ FGG K +G GRE +++
Sbjct: 433 FTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYM 490
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 183/377 (48%), Gaps = 16/377 (4%)
Query: 39 FIEFYAEEAKRVYG---EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 95
FIE+YA A R E++P D F + P+G I PWNFP+A+ T + +
Sbjct: 141 FIEYYARAALRYRYPAVEVVPYPGEDNESFYV--PLGAGVVIAPWNFPVAIFTGMIVGPV 198
Query: 96 ACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITF 155
A G TV+ KP+E G PPGVVN + G ++G L+ P++R I F
Sbjct: 199 AVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINF 258
Query: 156 TGSTAVGKKL------MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNS 209
TGS VG K+ +A K+ +E GG IV + AD ++A G + + +
Sbjct: 259 TGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQ 318
Query: 210 GQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 269
GQ A+R+++ +G YE + K + L VG E GP+++ KV +++E
Sbjct: 319 GQKXSAASRLILTQGAYEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIE 377
Query: 270 DAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 329
++G +++LGG+R F PTV + V + +++EE+FGPV ++ K EA+
Sbjct: 378 IGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALE 436
Query: 330 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGL-GR 386
+ANDT GL +++ + G + N + V PFGG K SG +
Sbjct: 437 VANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAK 496
Query: 387 EGSKYGMDEFLEIKYVC 403
G+ + FLE+K V
Sbjct: 497 TGALDYLRLFLEMKAVA 513
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 157 bits (397), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 147/302 (48%), Gaps = 4/302 (1%)
Query: 70 PVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGV 129
P + G I+PWNFPL + PAL GC VVVKPSE P V
Sbjct: 126 PYPLVGVISPWNFPLTLSXIDTIPALLAGCAVVVKPSEIAPRFVAPLLXALNTVPELRDV 185
Query: 130 VNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVF 189
+ V G + G L+ V + FTGS A G+++ AA LELGG P IV
Sbjct: 186 LIFVEGGG-ETGANLIN--YVDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVL 242
Query: 190 DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 249
+ A+L +A + L N+GQ+C+ R+ V E +E+F L++ E
Sbjct: 243 ESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVED 302
Query: 250 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY-EPTVLSNVKSEMLVSR 308
GP+I + + + DAV KGA + GG+ LG ++ PTV +NV V
Sbjct: 303 GAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVXTNVNHSXKVXT 362
Query: 309 EEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL 368
EE FGP+ P+ F EEA+++ANDT GL+A +F + +V+ L G + +N+
Sbjct: 363 EETFGPIXPVXPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAA 422
Query: 369 IS 370
++
Sbjct: 423 LT 424
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 164/336 (48%), Gaps = 8/336 (2%)
Query: 65 FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXG 124
+ ++QPVG+ ITP+NFP + PA+ACG ++KPSE P G
Sbjct: 157 YSIRQPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVPIRLAELXIEAG 216
Query: 125 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNA 184
+P G++NVV G+ + DA+LT P + ++F GST + + + AA K+ G
Sbjct: 217 LPAGILNVVNGDKGAV-DAILTHPDIAAVSFVGSTPIARYVYGTAAXNGKRAQCFGGAKN 275
Query: 185 PCIVFDDADLNVAVNGALAAKFRNSGQTCVCAN-RVLVQEGIYEKFADAFSKAVKNLKVG 243
I+ DADL+ A N + A + ++G+ C + V V E + D V++L++G
Sbjct: 276 HXIIXPDADLDQAANALIGAGYGSAGERCXAISVAVPVGEETANRLIDKLVPXVESLRIG 335
Query: 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL----GMTFYEPTVLSN 299
E GP++ K A +++ + ++ + +GAK+++ GR L F + +
Sbjct: 336 PYTDEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDD 395
Query: 300 VKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEY 359
V + + + E+FGPV ++ + EEA+ + G I+T + + +
Sbjct: 396 VTPDXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGVAIYTRDGDAARDFASRINI 455
Query: 360 GLVGVNEGL-ISTEVAPFGGVKQSGLGREGSKYGMD 394
G VGVN + + FGG K S G + +++G D
Sbjct: 456 GXVGVNVPIPVPLAYHSFGGWKSSSFG-DLNQHGTD 490
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 175/388 (45%), Gaps = 12/388 (3%)
Query: 32 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 91
+V F+E+YA E R+ P +P GVA I PWNFPLA+
Sbjct: 628 DVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMA 687
Query: 92 GPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVR 151
A+ G VV KPS T G+P GV N G +GD L+ P +
Sbjct: 688 SAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDIS 747
Query: 152 KITFTGSTAVGKKLMAGAA------GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAK 205
I FTGS G +++ AA VKK+ E+GG I+ DDADL+ AV L +
Sbjct: 748 LIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSA 807
Query: 206 FRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVE 265
F GQ C +RV+V + +Y+KF + K KVG G + + A++ ++
Sbjct: 808 FGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIK 867
Query: 266 TFVEDAVSKGAKVLLGGRRHSLGMTFYEP-TVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324
+ E + K +L G ++ P T++ +K E +++EE+FGPV ++ K
Sbjct: 868 EYAE--IGKREGHVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDF 925
Query: 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST--EVAPFGGVKQS 382
++AI AN T L IF+ + + + G + +N E PFGG + S
Sbjct: 926 DQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMS 985
Query: 383 GLG-REGSKYGMDEFLEIKYVCLGDMNR 409
G+G + G + F++ + V M R
Sbjct: 986 GVGTKAGGPDYLLHFMDPRVVTENTMRR 1013
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 110/333 (33%), Positives = 161/333 (48%), Gaps = 8/333 (2%)
Query: 59 LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXX 118
L D + +P GV P+NFP + + PAL G VV KPSE TP
Sbjct: 128 LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLK 187
Query: 119 XXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV-S 177
G+P GV+N+V G + G AL + + FTGS+ G L + G +K+ +
Sbjct: 188 AWIQAGLPAGVLNLVQGGR-ETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILA 246
Query: 178 LELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV 237
LE GGN P +V + ADL+ AV + + F ++GQ C CA R+LV +G + A AV
Sbjct: 247 LEXGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAV 306
Query: 238 K-NLKVGDGFGE--GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEP 294
L+VG F E G +I+ +A E + E + KGA+ LL + G P
Sbjct: 307 SATLRVGR-FDEQPAPFXGAVISLSAAEHLLKAQEHLIGKGAQPLLAXTQPIDGAALLTP 365
Query: 295 TVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVS 354
+L +V + EE FGP+ ++ + AI AN T GLAA + +++ +R +
Sbjct: 366 GIL-DVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFL 424
Query: 355 EALEYGLVGVNEGLI-STEVAPFGGVKQSGLGR 386
G+V N+ L + APFGG+ SG R
Sbjct: 425 VESRAGIVNWNKQLTGAASSAPFGGIGASGNHR 457
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 171/377 (45%), Gaps = 19/377 (5%)
Query: 29 LLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88
+L E+D+ ++ + +II + +V+++P GV I P+N+P+ +
Sbjct: 93 VLHEIDFALAHLDEWVAPVSVPSPDIIAPS----ECYVVQEPYGVTYIIGPFNYPVNLTL 148
Query: 89 RKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSP 148
+ A+ G T ++KPSE TP P V V+ G D LL+ P
Sbjct: 149 TPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAE-AFAPEYVAVIQGGR-DENSHLLSLP 206
Query: 149 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
I FTGS VGK +M AA + V LELGG P IV DADL+ VN + KF N
Sbjct: 207 -FDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFIN 265
Query: 209 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 268
SGQTC+ + + V + + + + VK E G L+ + ++++ + +
Sbjct: 266 SGQTCIAPDYLYVHYSVKDALLERLVERVKT-----ELPEINSTGKLVTERQVQRLVSLL 320
Query: 269 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 328
E + +VL+G + + TV+ V+ + EE+FGP+ P+L F + AI
Sbjct: 321 E---ATQGQVLVGSQA-DVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAI 376
Query: 329 HMANDTNAG-LAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLG 385
N + LA Y+F ++ + ++ G VN ++ + PFGG+ SG+G
Sbjct: 377 DQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMG 436
Query: 386 REGSKYGMDEFLEIKYV 402
+ F K V
Sbjct: 437 EYHGHFSYLTFTHKKSV 453
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 170/381 (44%), Gaps = 27/381 (7%)
Query: 30 LREVDYGAKFIEFYAEEAKRVYGE--IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87
L E+ A F +YA + ++++G +P + ++ GV AI+PWNFPLA+
Sbjct: 608 LSELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRG-RGVFVAISPWNFPLAIF 666
Query: 88 TRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTS 147
+V AL G +VV KP+E TP GIP + +V G+ IG AL
Sbjct: 667 LGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDG-RIGAALTAH 725
Query: 148 PQVRKITFTGSTAVGKKL---MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA 204
P + + FTGST V + + +A G + + E GG I A + + +
Sbjct: 726 PDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTS 785
Query: 205 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 264
FR++GQ C + VQE + ++ + + A + LK+GD GP+I+ A +++
Sbjct: 786 AFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRL 845
Query: 265 ETFVEDAVSKGAKVLLGGRRHSLGMT----FYEPTVLSNVKSEMLVSREEVFGPVAPLLC 320
+ + A++ R H G F P + ++ L EEVFGP+ ++
Sbjct: 846 DAHI-------ARMKTEARLHFAGPAPEGCFVAPHIFELTEAGQLT--EEVFGPILHVVR 896
Query: 321 FKTE--EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PF 376
++ E E + T GL + + + + ++ G + VN +I V PF
Sbjct: 897 YRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPF 956
Query: 377 GGVKQSGLGREGSKYGMDEFL 397
GG +GL G K G +L
Sbjct: 957 GG---NGLSGTGPKAGGPHYL 974
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 170/377 (45%), Gaps = 19/377 (5%)
Query: 29 LLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88
+L E+D+ ++ + +II + +V+++P GV I P+N+P+ +
Sbjct: 93 VLHEIDFALAHLDEWVAPVSVPSPDIIAPS----ECYVVQEPYGVTYIIGPFNYPVNLTL 148
Query: 89 RKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSP 148
+ A+ G T ++KPSE TP P V V+ G D LL+ P
Sbjct: 149 TPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAE-AFAPEYVAVIQGGR-DENSHLLSLP 206
Query: 149 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 208
I FTGS VGK +M AA + V LELGG P IV DADL+ VN + KF N
Sbjct: 207 -FDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFIN 265
Query: 209 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 268
SGQT + + + V + + + + VK E G L+ + ++++ + +
Sbjct: 266 SGQTXIAPDYLYVHYSVKDALLERLVERVKT-----ELPEINSTGKLVTERQVQRLVSLL 320
Query: 269 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 328
E + +VL+G + + TV+ V+ + EE+FGP+ P+L F + AI
Sbjct: 321 E---ATQGQVLVGSQA-DVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAI 376
Query: 329 HMANDTNAG-LAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLG 385
N + LA Y+F ++ + ++ G VN ++ + PFGG+ SG+G
Sbjct: 377 DQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMG 436
Query: 386 REGSKYGMDEFLEIKYV 402
+ F K V
Sbjct: 437 EYHGHFSYLTFTHKKSV 453
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 165/375 (44%), Gaps = 19/375 (5%)
Query: 27 SLLLREVDYGAKFIEFYAEEAK---RVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFP 83
+++ E+D A+ I+F+ AK + GE + P V + G AI+P+NF
Sbjct: 154 TVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFT 213
Query: 84 LAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDA 143
PAL G V+ KPS+ G+PP ++ V + P GD
Sbjct: 214 AIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDT 272
Query: 144 LLTSPQVRKITFTGSTAVGKKLMAGAAG------TVKKVSLELGGNAPCIVFDDADLNVA 197
+ +S + I FTGS K L A T +++ E GG V AD++
Sbjct: 273 VTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSV 332
Query: 198 VNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE-GVVQGPLI 256
V+G L + F GQ C +R+ V + ++ + + +KVGD + G +I
Sbjct: 333 VSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVI 392
Query: 257 NKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY-EPTVLSNVKSEMLVSREEVFGPV 315
+ A +++ ++E A S + +L G + + + +Y EP ++ + + + +EE+FGPV
Sbjct: 393 DAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPV 452
Query: 316 APLLCFKTEE--EAIHMANDTNA-GLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLIS 370
+ + ++ E + + + T + GL +F + + L G +N+
Sbjct: 453 LTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTG 512
Query: 371 TEVA--PFGGVKQSG 383
+ V PFGG + SG
Sbjct: 513 SVVGQQPFGGARASG 527
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 166/376 (44%), Gaps = 21/376 (5%)
Query: 27 SLLLREVDYGAKFIEFY---AEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFP 83
+++ E+D A+ I+F+ A+ A + G+ + P V + G AI+P+NF
Sbjct: 157 TVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFT 216
Query: 84 LAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDA 143
PAL G V+ KPS+ G+PP ++ V + P GD
Sbjct: 217 AIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDT 275
Query: 144 LLTSPQVRKITFTGSTAVGKKLMAGAA------GTVKKVSLELGGNAPCIVFDDADLNVA 197
+ +S + I FTGS K L A T +++ E GG V AD+
Sbjct: 276 VTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESV 335
Query: 198 VNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE-GVVQGPLI 256
V+G L + F GQ C +R+ V ++ + + +KVGD + G +I
Sbjct: 336 VSGTLRSAFEYGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVI 395
Query: 257 NKAALEKVETFVEDAVSKGAKVLLGGRR--HSLGMTFYEPTVLSNVKSEMLVSREEVFGP 314
+ + +++ ++E A S + +L G + S+G F EP ++ + + + +EE+FGP
Sbjct: 396 DAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGY-FVEPCIVESKDPQEPIMKEEIFGP 454
Query: 315 VAPLLCFKTE--EEAIHMANDTNA-GLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLI 369
V + + + +E + + + T + GL +F+ + ++ L G +N+
Sbjct: 455 VLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYINDKST 514
Query: 370 STEVA--PFGGVKQSG 383
+ V PFGG + SG
Sbjct: 515 GSIVGQQPFGGARASG 530
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 165/376 (43%), Gaps = 21/376 (5%)
Query: 27 SLLLREVDYGAKFIEFY---AEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFP 83
+++ E+D A+ I+F+ A+ A + G+ + P V + G AI+P+NF
Sbjct: 157 TVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFT 216
Query: 84 LAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDA 143
PAL G V+ KPS+ G+PP ++ V + P GD
Sbjct: 217 AIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDT 275
Query: 144 LLTSPQVRKITFTGSTAVGKKLMAGAA------GTVKKVSLELGGNAPCIVFDDADLNVA 197
+ +S + I FTGS K L A T +++ E GG V AD+
Sbjct: 276 VTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESV 335
Query: 198 VNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE-GVVQGPLI 256
V+G L + F GQ C R+ V ++ + + +KVGD + G +I
Sbjct: 336 VSGTLRSAFEYGGQKCSACARLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVI 395
Query: 257 NKAALEKVETFVEDAVSKGAKVLLGGRR--HSLGMTFYEPTVLSNVKSEMLVSREEVFGP 314
+ + +++ ++E A S + +L G + S+G F EP ++ + + + +EE+FGP
Sbjct: 396 DAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGY-FVEPCIVESKDPQEPIMKEEIFGP 454
Query: 315 VAPLLCFKTE--EEAIHMANDTNA-GLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLI 369
V + + + +E + + + T + GL +F+ + ++ L G +N+
Sbjct: 455 VLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYINDKST 514
Query: 370 STEVA--PFGGVKQSG 383
+ V PFGG + SG
Sbjct: 515 GSIVGQQPFGGARASG 530
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 165/376 (43%), Gaps = 21/376 (5%)
Query: 27 SLLLREVDYGAKFIEFY---AEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFP 83
+++ E+D A+ I+F+ A+ A + G+ + P V + G AI+P+NF
Sbjct: 157 TVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFT 216
Query: 84 LAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDA 143
PAL G V+ KPS+ G+PP ++ V + P GD
Sbjct: 217 AIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDT 275
Query: 144 LLTSPQVRKITFTGSTAVGKKLMAGAA------GTVKKVSLELGGNAPCIVFDDADLNVA 197
+ +S + I FTGS K L A T +++ E GG V AD+
Sbjct: 276 VTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESV 335
Query: 198 VNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE-GVVQGPLI 256
V+G L + F GQ C R+ V ++ + + +KVGD + G +I
Sbjct: 336 VSGTLRSAFEYGGQKCSACLRLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVI 395
Query: 257 NKAALEKVETFVEDAVSKGAKVLLGGRR--HSLGMTFYEPTVLSNVKSEMLVSREEVFGP 314
+ + +++ ++E A S + +L G + S+G F EP ++ + + + +EE+FGP
Sbjct: 396 DAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGY-FVEPCIVESKDPQEPIMKEEIFGP 454
Query: 315 VAPLLCFKTE--EEAIHMANDTNA-GLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLI 369
V + + + +E + + + T + GL +F+ + ++ L G +N+
Sbjct: 455 VLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYINDKST 514
Query: 370 STEVA--PFGGVKQSG 383
+ V PFGG + SG
Sbjct: 515 GSIVGQQPFGGARASG 530
>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
pdb|2VRO|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
Length = 532
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 123/308 (39%), Gaps = 32/308 (10%)
Query: 65 FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXG 124
VL GVA I +NFP + K PAL G V+VKP+ T G
Sbjct: 144 HVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAG 203
Query: 125 I-PPGVVNVVMGNAPDIGDALLTSPQVRK---ITFTGSTAVGKKLMAGAAGTVKKVSLEL 180
I PPG ++++ G++ + D Q+R ++FTGS L A A + L +
Sbjct: 204 ILPPGALSIICGSSAGLLD------QIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNV 257
Query: 181 GGNA--PCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 233
++ I+ DA ++ + + SGQ C R V E E +A
Sbjct: 258 EADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEAL 317
Query: 234 SKAVKNLKVGDGFGEGVVQGPLINKAALEKV----ETFVEDAV---SKGAKVLLGGRRHS 286
+ + VG+ + V G L+++ E V E+AV A L+ +
Sbjct: 318 KAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANI 377
Query: 287 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT--------EEEAIHMANDTNAGL 338
V+++ + L+ EVFGPVA + ++ E A+ +A L
Sbjct: 378 AACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSL 437
Query: 339 AAYIFTNN 346
A I++N+
Sbjct: 438 VASIYSND 445
>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y53|B Chain B, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 123/308 (39%), Gaps = 32/308 (10%)
Query: 65 FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXG 124
VL GVA I +NFP + K PAL G V+VKP+ T G
Sbjct: 146 HVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAG 205
Query: 125 I-PPGVVNVVMGNAPDIGDALLTSPQVRK---ITFTGSTAVGKKLMAGAAGTVKKVSLEL 180
I PPG ++++ G++ + D Q+R ++FTGS L A A + L +
Sbjct: 206 ILPPGALSIICGSSAGLLD------QIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNV 259
Query: 181 GGNA--PCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 233
++ I+ DA ++ + + SGQ C R V E E +A
Sbjct: 260 QADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEAL 319
Query: 234 SKAVKNLKVGDGFGEGVVQGPLINKAALEKV----ETFVEDAV---SKGAKVLLGGRRHS 286
+ + VG+ + V G L+++ E V E+AV A L+ +
Sbjct: 320 KAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANI 379
Query: 287 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT--------EEEAIHMANDTNAGL 338
V+++ + L+ EVFGPVA + ++ E A+ +A L
Sbjct: 380 AACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSL 439
Query: 339 AAYIFTNN 346
A I++N+
Sbjct: 440 VASIYSND 447
>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y52|B Chain B, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 123/308 (39%), Gaps = 32/308 (10%)
Query: 65 FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXG 124
VL GVA I +NFP + K PAL G V+VKP+ T G
Sbjct: 146 HVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAG 205
Query: 125 I-PPGVVNVVMGNAPDIGDALLTSPQVRK---ITFTGSTAVGKKLMAGAAGTVKKVSLEL 180
I PPG ++++ G++ + D Q+R ++FTGS L A A + L +
Sbjct: 206 ILPPGALSIICGSSAGLLD------QIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNV 259
Query: 181 GGNA--PCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 233
++ I+ DA ++ + + SGQ C R V E E +A
Sbjct: 260 EADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEAL 319
Query: 234 SKAVKNLKVGDGFGEGVVQGPLINKAALEKV----ETFVEDAV---SKGAKVLLGGRRHS 286
+ + VG+ + V G L+++ E V E+AV A L+ +
Sbjct: 320 KAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANI 379
Query: 287 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT--------EEEAIHMANDTNAGL 338
V+++ + L+ EVFGPVA + ++ E A+ +A L
Sbjct: 380 AACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSL 439
Query: 339 AAYIFTNN 346
A I++N+
Sbjct: 440 VASIYSND 447
>pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y51|B Chain B, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 123/308 (39%), Gaps = 32/308 (10%)
Query: 65 FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXG 124
VL GVA I +NFP + K PAL G V+VKP+ T G
Sbjct: 146 HVLSPTRGVALFINAFNFPSWGLWAKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAG 205
Query: 125 I-PPGVVNVVMGNAPDIGDALLTSPQVRK---ITFTGSTAVGKKLMAGAAGTVKKVSLEL 180
I PPG ++++ G++ + D Q+R ++FTGS L A A + L +
Sbjct: 206 ILPPGALSIICGSSAGLLD------QIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNV 259
Query: 181 GGNA--PCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 233
++ I+ DA ++ + + SGQ C R V E E +A
Sbjct: 260 EADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEAL 319
Query: 234 SKAVKNLKVGDGFGEGVVQGPLINKAALEKV----ETFVEDAV---SKGAKVLLGGRRHS 286
+ + VG+ + V G L+++ E V E+AV A L+ +
Sbjct: 320 KAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANI 379
Query: 287 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT--------EEEAIHMANDTNAGL 338
V+++ + L+ EVFGPVA + ++ E A+ +A L
Sbjct: 380 AACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSL 439
Query: 339 AAYIFTNN 346
A I++N+
Sbjct: 440 VASIYSND 447
>pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3V4C|B Chain B, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 528
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 126/323 (39%), Gaps = 43/323 (13%)
Query: 60 PDRRLFVLKQPVGVAGAITPWNFPLAMITR--KVGPALACGCTVVVKPSEFTPXX----X 113
P + + ++++PVG NFPLA T ALA GC VVVK P
Sbjct: 159 PRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVA 218
Query: 114 XXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 173
G+ PGV +++ G + D+G AL+ P ++ + FTGS A G+ L A
Sbjct: 219 EAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARP 278
Query: 174 KKVSL--ELGGNAPCIVFDDA------DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 225
+ + ELG P + +A L G+L +GQ C +V EG
Sbjct: 279 EPIPFFGELGSVNPXFLLPEALKARAETLGQGWAGSLTX---GAGQFCTNPGIAVVIEGA 335
Query: 226 -YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG--- 281
++F A +A+ + +G+ + +A A K LL
Sbjct: 336 DADRFTTAAVEALAKVAPQTXLTDGIAKAYRDGQARF---------ATRNAVKPLLATES 386
Query: 282 -GRRHSLGMTFYEPTVLSNVKSEMLVSR---EEVFGPVAPLLCFKTEEEAIHMANDTNAG 337
GR S P + ++ L EEVFGP+ ++ + E +A
Sbjct: 387 SGRDAS-------PNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEXEELARGFQGQ 439
Query: 338 LAAYIFTN--NLQRTWRVSEALE 358
L A I + +L+ R+ LE
Sbjct: 440 LTATIHXDAGDLETARRLRPVLE 462
>pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y5D|B Chain B, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 122/308 (39%), Gaps = 32/308 (10%)
Query: 65 FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXG 124
VL GVA I +NFP + K PAL G V+VKP+ T G
Sbjct: 146 HVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAG 205
Query: 125 I-PPGVVNVVMGNAPDIGDALLTSPQVRK---ITFTGSTAVGKKLMAGAAGTVKKVSLEL 180
I PPG ++++ G++ + D Q+R ++FTGS L A A + L +
Sbjct: 206 ILPPGALSIICGSSAGLLD------QIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNV 259
Query: 181 GGNA--PCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 233
++ I+ DA ++ + + SGQ R V E E +A
Sbjct: 260 EADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKATAIRRAFVPEAALEPVLEAL 319
Query: 234 SKAVKNLKVGDGFGEGVVQGPLINKAALEKV----ETFVEDAV---SKGAKVLLGGRRHS 286
+ + VG+ + V G L+++ E V E+AV A L+ +
Sbjct: 320 KAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANI 379
Query: 287 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT--------EEEAIHMANDTNAGL 338
V+++ + L+ EVFGPVA + ++ E A+ +A L
Sbjct: 380 AACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSL 439
Query: 339 AAYIFTNN 346
A I++N+
Sbjct: 440 VASIYSND 447
>pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi
Length = 510
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 61/146 (41%), Gaps = 12/146 (8%)
Query: 56 PATLPD-RRLFVLKQPVGVAGAITPWNFPLAMITR--KVGPALACGCTVVVKPSEFTPXX 112
P PD RR + PV V GA NFPLA ALA GC V+VK P
Sbjct: 124 PLPKPDIRRQQIALGPVAVFGAS---NFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGT 180
Query: 113 XXXXX----XXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 168
+P + ++ GN +G AL++ P+++ + FTGS G+ L
Sbjct: 181 SQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNL 240
Query: 169 AAGTVKKVSL--ELGGNAPCIVFDDA 192
A + + ELG P +F A
Sbjct: 241 AHERPEPIPFYGELGAINPTFIFPSA 266
>pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|B Chain B, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|C Chain C, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|D Chain D, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
Length = 452
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 70/173 (40%), Gaps = 10/173 (5%)
Query: 67 LKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPS----EFTPXXXXXXXXXXXX 122
+ +PVG+ I P P + K +L ++ P T
Sbjct: 100 IAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVA 159
Query: 123 XGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG- 181
G P ++ + + ++ +AL + I TG K AA + K ++ +G
Sbjct: 160 AGAPKDIIGWIDQPSVELSNALXKHDDIALILATGGPGXVK-----AAYSSGKPAIGVGA 214
Query: 182 GNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 234
GN P ++ + AD+ AV L +K ++G C V+V + +Y++ + F+
Sbjct: 215 GNVPVVIDETADIKRAVASVLXSKTFDNGVVCASEQAVIVVDEVYDEVKERFA 267
>pdb|4DQ8|A Chain A, Crystal Structure Of Acetate Kinase Acka From
Mycobacterium Marinum
pdb|4DQ8|B Chain B, Crystal Structure Of Acetate Kinase Acka From
Mycobacterium Marinum
Length = 391
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 57/142 (40%), Gaps = 27/142 (19%)
Query: 257 NKAALEKV-ETFVEDAVS--KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFG 313
+ AAL +V E ED + V +G R G FYEPT+L++ ++ + +
Sbjct: 55 HDAALRRVFEILAEDDIDLQSCGLVAVGHRVVHGGKDFYEPTLLNDA----VIGKLDELS 110
Query: 314 PVAPL------LCFKTEEEAI----HMA-------NDTNAGLAAYIFTNNLQRTWRVSEA 356
P+APL LC + + H+A + A Y L W++
Sbjct: 111 PLAPLHNPPAVLCIRVARALLPDVPHIAVFDTAFFHQLPPAAATYAIDRELADVWKIR-- 168
Query: 357 LEYGLVGVNEGLISTEVAPFGG 378
YG G + +S + A F G
Sbjct: 169 -RYGFHGTSHEYVSQQAAEFLG 189
>pdb|3R9P|A Chain A, Crystal Structure Of Acka From Mycobacterium
Paratuberculosis Atcc Baa-968 K-10
pdb|3R9P|B Chain B, Crystal Structure Of Acka From Mycobacterium
Paratuberculosis Atcc Baa-968 K-10
Length = 391
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 51/132 (38%), Gaps = 35/132 (26%)
Query: 272 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPL----------LCF 321
V+ G +V+ GG TFY PTVL + +++R +APL +
Sbjct: 79 VAVGHRVVHGGN------TFYRPTVLDDA----VIARLHELSELAPLHNPPALQGIEVAR 128
Query: 322 KTEEEAIHMA-------NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA 374
+ + H+A +D A Y L W++ YG G + +S + A
Sbjct: 129 RLLPDIAHVAVFDTGFFHDLPPAAATYAIDRELADRWQIR---RYGFHGTSHRYVSEQAA 185
Query: 375 -----PFGGVKQ 381
P G+KQ
Sbjct: 186 AFLDRPLRGLKQ 197
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,252,535
Number of Sequences: 62578
Number of extensions: 454684
Number of successful extensions: 1330
Number of sequences better than 100.0: 97
Number of HSP's better than 100.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1020
Number of HSP's gapped (non-prelim): 97
length of query: 410
length of database: 14,973,337
effective HSP length: 101
effective length of query: 309
effective length of database: 8,652,959
effective search space: 2673764331
effective search space used: 2673764331
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)