Query 015249
Match_columns 410
No_of_seqs 190 out of 1708
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 09:17:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015249.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015249hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 9.5E-93 3.2E-97 719.3 41.4 397 8-405 80-482 (490)
2 3ifg_A Succinate-semialdehyde 100.0 3E-91 1E-95 709.1 41.5 398 8-405 86-483 (484)
3 3ed6_A Betaine aldehyde dehydr 100.0 2.3E-90 7.8E-95 707.2 43.9 399 8-406 108-510 (520)
4 3ek1_A Aldehyde dehydrogenase; 100.0 1.2E-90 4.2E-95 706.7 41.0 396 8-405 106-501 (504)
5 3ros_A NAD-dependent aldehyde 100.0 3.5E-90 1.2E-94 700.6 43.2 397 8-406 62-458 (484)
6 3rh9_A Succinate-semialdehyde 100.0 4.4E-90 1.5E-94 702.9 43.1 398 8-406 85-484 (506)
7 3u4j_A NAD-dependent aldehyde 100.0 1.2E-89 4E-94 703.1 43.1 399 8-406 99-498 (528)
8 2o2p_A Formyltetrahydrofolate 100.0 7.4E-90 2.5E-94 703.0 41.4 398 8-405 112-516 (517)
9 3iwj_A Putative aminoaldehyde 100.0 2.1E-89 7.2E-94 699.0 44.6 398 8-405 86-488 (503)
10 3jz4_A Succinate-semialdehyde 100.0 2.9E-89 9.8E-94 695.4 45.3 398 8-405 83-480 (481)
11 4f3x_A Putative aldehyde dehyd 100.0 7.4E-90 2.5E-94 700.6 38.8 397 8-405 98-496 (498)
12 3k2w_A Betaine-aldehyde dehydr 100.0 1.8E-89 6E-94 698.7 39.8 399 8-406 86-488 (497)
13 1bxs_A Aldehyde dehydrogenase; 100.0 1E-88 3.6E-93 692.6 43.8 397 8-405 97-495 (501)
14 2d4e_A 5-carboxymethyl-2-hydro 100.0 1.5E-88 5.1E-93 694.2 44.2 397 8-405 100-504 (515)
15 1a4s_A ALDH, betaine aldehyde 100.0 6.6E-89 2.3E-93 694.9 40.8 396 8-405 94-495 (503)
16 1o04_A Aldehyde dehydrogenase, 100.0 8.5E-89 2.9E-93 693.1 41.3 398 8-406 96-495 (500)
17 2imp_A Lactaldehyde dehydrogen 100.0 1.4E-88 4.8E-93 690.0 42.8 398 8-405 80-478 (479)
18 3prl_A NADP-dependent glyceral 100.0 1.9E-88 6.4E-93 691.3 42.9 393 8-406 85-483 (505)
19 3etf_A Putative succinate-semi 100.0 4.2E-88 1.4E-92 684.4 44.3 398 8-407 65-462 (462)
20 3qan_A 1-pyrroline-5-carboxyla 100.0 4.9E-88 1.7E-92 692.6 44.9 397 8-406 110-516 (538)
21 1wnd_A Putative betaine aldehy 100.0 2.1E-88 7.2E-93 689.4 41.5 396 8-405 96-494 (495)
22 4e4g_A Methylmalonate-semialde 100.0 2.7E-88 9.4E-93 692.0 41.6 397 8-405 100-504 (521)
23 3b4w_A Aldehyde dehydrogenase; 100.0 1.5E-88 5.1E-93 691.0 38.0 395 8-405 84-481 (495)
24 3i44_A Aldehyde dehydrogenase; 100.0 9.3E-88 3.2E-92 685.0 43.4 393 8-404 99-496 (497)
25 3r31_A BADH, betaine aldehyde 100.0 1.8E-88 6.3E-93 692.7 37.5 394 8-406 88-488 (517)
26 2w8n_A Succinate-semialdehyde 100.0 3.1E-88 1E-92 687.9 38.7 397 8-405 84-485 (487)
27 3pqa_A Lactaldehyde dehydrogen 100.0 1.3E-87 4.5E-92 682.1 42.8 390 8-406 70-464 (486)
28 2ve5_A BADH, betaine aldehyde 100.0 3.4E-87 1.2E-91 682.0 42.2 398 8-406 80-483 (490)
29 1uzb_A 1-pyrroline-5-carboxyla 100.0 9.1E-87 3.1E-91 681.6 45.1 396 8-405 110-515 (516)
30 2j6l_A Aldehyde dehydrogenase 100.0 3.7E-87 1.3E-91 682.1 41.7 397 8-405 95-498 (500)
31 1euh_A NADP dependent non phos 100.0 5.6E-87 1.9E-91 677.6 41.4 392 8-405 76-473 (475)
32 4dng_A Uncharacterized aldehyd 100.0 5E-87 1.7E-91 680.0 41.1 397 8-407 80-479 (485)
33 1uxt_A Glyceraldehyde-3-phosph 100.0 3.1E-87 1.1E-91 682.3 39.2 392 8-405 91-491 (501)
34 3r64_A NAD dependent benzaldeh 100.0 7.1E-87 2.4E-91 681.2 41.4 396 8-407 86-486 (508)
35 1t90_A MMSDH, probable methylm 100.0 3.9E-86 1.3E-90 672.8 39.2 397 8-406 79-480 (486)
36 3ty7_A Putative aldehyde dehyd 100.0 4.1E-86 1.4E-90 672.1 36.0 390 8-403 81-474 (478)
37 4e3x_A Delta-1-pyrroline-5-car 100.0 1.7E-84 5.7E-89 667.9 41.3 396 11-407 140-552 (563)
38 3sza_A Aldehyde dehydrogenase, 100.0 2.9E-84 9.9E-89 655.4 42.0 389 8-406 54-448 (469)
39 4h7n_A Aldehyde dehydrogenase; 100.0 5.3E-84 1.8E-88 655.6 39.9 394 9-406 65-463 (474)
40 4f9i_A Proline dehydrogenase/d 100.0 7.8E-83 2.7E-87 689.2 44.4 397 9-406 605-1010(1026)
41 3lns_A Benzaldehyde dehydrogen 100.0 8.9E-83 3E-87 643.8 41.4 386 8-405 64-456 (457)
42 3ju8_A Succinylglutamic semial 100.0 1.9E-82 6.4E-87 646.3 40.7 390 8-406 78-471 (490)
43 2y53_A Aldehyde dehydrogenase 100.0 2E-81 6.7E-86 645.1 38.0 394 8-405 80-518 (534)
44 3haz_A Proline dehydrogenase; 100.0 3.5E-80 1.2E-84 667.1 41.9 393 8-406 586-987 (1001)
45 1ez0_A ALDH, aldehyde dehydrog 100.0 4.6E-77 1.6E-81 609.4 36.6 382 8-403 66-480 (510)
46 3v4c_A Aldehyde dehydrogenase 100.0 3E-77 1E-81 613.3 34.9 382 8-401 99-513 (528)
47 1vlu_A Gamma-glutamyl phosphat 100.0 1.3E-72 4.5E-77 569.6 19.7 360 8-406 50-440 (468)
48 3k9d_A LMO1179 protein, aldehy 100.0 1.6E-70 5.4E-75 555.4 26.9 374 8-405 48-448 (464)
49 2h5g_A Delta 1-pyrroline-5-car 100.0 9.3E-71 3.2E-75 555.4 23.9 350 8-406 65-435 (463)
50 1o20_A Gamma-glutamyl phosphat 100.0 9.9E-70 3.4E-74 543.7 24.5 350 8-406 50-422 (427)
51 4ghk_A Gamma-glutamyl phosphat 100.0 2.3E-69 7.8E-74 543.7 23.1 351 9-406 63-439 (444)
52 3my7_A Alcohol dehydrogenase/a 100.0 1.2E-66 4.1E-71 525.3 22.4 373 8-406 43-449 (452)
53 4gic_A HDH, histidinol dehydro 97.8 0.0083 2.8E-07 58.0 24.7 259 60-402 119-399 (423)
54 1kae_A HDH, histidinol dehydro 97.6 0.012 4.2E-07 57.0 22.1 260 61-403 114-393 (434)
55 1b93_A Protein (methylglyoxal 50.0 22 0.00075 29.3 4.9 114 72-210 12-135 (152)
56 1s7i_A Hypothetical protein PA 46.1 57 0.002 25.6 6.8 73 259-337 30-108 (124)
57 1vmd_A MGS, methylglyoxal synt 42.5 15 0.00052 31.0 2.9 121 65-210 20-151 (178)
58 3v42_A Folliculin; tumor suppr 40.1 18 0.00062 31.9 3.1 65 88-160 21-85 (226)
59 2fiu_A Conserved hypothetical 39.8 66 0.0023 24.0 6.0 57 258-334 17-74 (99)
60 2yvq_A Carbamoyl-phosphate syn 37.0 27 0.00093 28.2 3.6 63 117-180 60-132 (143)
61 2xw6_A MGS, methylglyoxal synt 31.9 15 0.00052 29.5 1.2 80 91-180 24-112 (134)
62 2qv7_A Diacylglycerol kinase D 30.3 1.4E+02 0.0047 27.5 7.8 103 100-206 28-142 (337)
63 2bon_A Lipid kinase; DAG kinas 27.5 2E+02 0.0069 26.3 8.4 103 100-206 33-146 (332)
64 2i2c_A Probable inorganic poly 27.5 88 0.003 28.0 5.7 87 101-205 5-94 (272)
65 3ufx_B Succinyl-COA synthetase 27.2 3E+02 0.01 26.1 9.7 83 97-182 247-342 (397)
66 2ioj_A Hypothetical protein AF 25.4 49 0.0017 26.2 3.2 44 128-171 53-96 (139)
67 3iwt_A 178AA long hypothetical 22.9 1.1E+02 0.0039 25.1 5.2 51 111-161 40-93 (178)
68 2v9v_A Selenocysteine-specific 22.3 1.2E+02 0.004 23.6 4.9 82 198-282 34-124 (135)
69 1b4b_A Arginine repressor; cor 21.9 1.7E+02 0.0057 20.3 5.1 37 96-136 11-47 (71)
70 2zfz_A Arginine repressor; DNA 21.7 1.7E+02 0.0059 20.7 5.2 39 94-136 17-55 (79)
71 3s40_A Diacylglycerol kinase; 20.1 2.9E+02 0.0099 24.8 7.8 100 100-204 12-123 (304)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=9.5e-93 Score=719.28 Aligned_cols=397 Identities=36% Similarity=0.583 Sum_probs=376.1
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHH-HHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLR-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~-ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
+++++++++++++|+|||+.+++. |+..+++.++||+.+.+++.++..+. .++...+++++|+|||++|+|||||+..
T Consensus 80 ~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwNfP~~~ 158 (490)
T 2wme_A 80 RERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQI 158 (490)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEE-ETTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccc-cCCcceeEEecceeEEEEeccccCcchh
Confidence 345567799999999999999986 69999999999999998877765543 2466788999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.+.
T Consensus 159 ~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~ 238 (490)
T 2wme_A 159 ALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVM 238 (490)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred hhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998889999999999999999999999998887
Q ss_pred H-HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCC
Q 015249 167 A-GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 167 ~-~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~ 245 (410)
+ .+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 239 ~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp 318 (490)
T 2wme_A 239 ASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDP 318 (490)
T ss_dssp HHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCC
Confidence 6 455678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceecceEeccCCCCCcccccceecceeeeeec
Q 015249 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 321 (410)
Q Consensus 246 ~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~----~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~ 321 (410)
.++++++||++++.+++++.++|++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 319 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 398 (490)
T 2wme_A 319 QDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVY 398 (490)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred ccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEe
Confidence 99999999999999999999999999999999999998653 24899999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 015249 322 KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 401 (410)
Q Consensus 322 ~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~ 401 (410)
+|.||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|.+||++||+.|+
T Consensus 399 ~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~ 478 (490)
T 2wme_A 399 DDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKS 478 (490)
T ss_dssp SCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEE
T ss_pred CCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHHHHHHHhhceeE
Confidence 99999999999999999999999999999999999999999999987777889999999999999999999999999999
Q ss_pred EEEe
Q 015249 402 VCLG 405 (410)
Q Consensus 402 v~~~ 405 (410)
|+++
T Consensus 479 v~i~ 482 (490)
T 2wme_A 479 VQVE 482 (490)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9986
No 2
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=3e-91 Score=709.06 Aligned_cols=398 Identities=57% Similarity=0.964 Sum_probs=379.1
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
+++++++++++++|+|||+.+++.|+..+++.++|++.++++..++..+...++...++.++|+|||++|+|||||+...
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 165 (484)
T 3ifg_A 86 IANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMI 165 (484)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHH
Confidence 34566779999999999999999999999999999999988766655443335677899999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|++
T Consensus 166 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~ 245 (484)
T 3ifg_A 166 ARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMA 245 (484)
T ss_dssp HHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977889999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.+++++||+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 246 ~aa~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 325 (484)
T 3ifg_A 246 QSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTE 325 (484)
T ss_dssp HTGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTS
T ss_pred HhhccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHH
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ea 327 (410)
+++++||++++.+++++.++|++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|.|||
T Consensus 326 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 405 (484)
T 3ifg_A 326 SGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEEL 405 (484)
T ss_dssp TTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHH
Confidence 99999999999999999999999999999999999764336899999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 328 i~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
|+++|+++|||+++|||+|.++++++++++++|+|+||+.....+.+||||+|+||+|+++|.+|+++||+.|+|++.
T Consensus 406 i~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 406 VRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp HHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 999999999999999999999999999999999999999877788999999999999999999999999999999874
No 3
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=2.3e-90 Score=707.19 Aligned_cols=399 Identities=38% Similarity=0.653 Sum_probs=379.8
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++++|+|||+.+++.|+..+++.++|++.+++++.++..+...++...++.++|+|||++|+|||||+...
T Consensus 108 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 187 (520)
T 3ed6_A 108 KEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQA 187 (520)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHH
Confidence 34567779999999999999999999999999999999998876655443324667889999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|++
T Consensus 188 ~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~ 267 (520)
T 3ed6_A 188 SWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMK 267 (520)
T ss_dssp HHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977889999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.|
T Consensus 268 ~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d 347 (520)
T 3ed6_A 268 NAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFD 347 (520)
T ss_dssp HHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTS
T ss_pred HhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~----~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+++++||++++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 348 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 427 (520)
T 3ed6_A 348 ADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFET 427 (520)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCC
Confidence 999999999999999999999999999999999997642 3589999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
+||||+++|+++|||+++|||+|.++++++++++++|+|+||+.....+.+||||+|+||+|+++|.+|+++||+.|+|+
T Consensus 428 ~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~ 507 (520)
T 3ed6_A 428 EQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHIL 507 (520)
T ss_dssp HHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999999998877789999999999999999999999999999998
Q ss_pred Eec
Q 015249 404 LGD 406 (410)
Q Consensus 404 ~~~ 406 (410)
++.
T Consensus 508 ~~~ 510 (520)
T 3ed6_A 508 TNT 510 (520)
T ss_dssp EES
T ss_pred EcC
Confidence 863
No 4
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=1.2e-90 Score=706.70 Aligned_cols=396 Identities=59% Similarity=0.955 Sum_probs=378.3
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++++|+|||+.+++.|+..+++.++|++.+.++..+...+...++...++.++|+|||++|+|||||+...
T Consensus 106 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 185 (504)
T 3ek1_A 106 IANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMI 185 (504)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHH
Confidence 34556779999999999999999999999999999999998766655444345677889999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|.+
T Consensus 186 ~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~ 265 (504)
T 3ek1_A 186 TRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMA 265 (504)
T ss_dssp HHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999877889999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.+++++||+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 266 ~aa~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 345 (504)
T 3ek1_A 266 QCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTE 345 (504)
T ss_dssp HHGGGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTS
T ss_pred hhhhhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHH
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ea 327 (410)
+++++||++++.+++++.++|++++++|+++++||... +|+|++|||+.+++++|++++||+||||++|++|+|.|||
T Consensus 346 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 423 (504)
T 3ek1_A 346 PGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKEL--GGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEV 423 (504)
T ss_dssp TTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEE--ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHH
T ss_pred ccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHH
Confidence 99999999999999999999999999999999999763 5799999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 328 i~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
|+++|+++|||+++|||+|.++++++++++++|+|+||+.....+.+||||+|+||+|+++|++|+++|++.|+|+++
T Consensus 424 i~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~ 501 (504)
T 3ek1_A 424 IAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSA 501 (504)
T ss_dssp HHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEE
T ss_pred HHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEe
Confidence 999999999999999999999999999999999999999887788999999999999999999999999999999875
No 5
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=3.5e-90 Score=700.65 Aligned_cols=397 Identities=28% Similarity=0.468 Sum_probs=378.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++.+|+||++.+++.|+..+++.++|++...+++.+...+.. .+...++.++|+|||++|+|||||+...
T Consensus 62 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 140 (484)
T 3ros_A 62 KEHEDELAKMMTLEMGKLLSESKEEVELCVSICNYYADHGPEMLKPTKLNS-DLGNAYYLKQSTGVIMACEPWNFPLYQV 140 (484)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEECC-TTSEEEEEEECCCEEEEECCSSSTTHHH
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeccC-CCceeEEEecCCceEEEECCCchHHHHH
Confidence 445667799999999999999999999999999999999988777654432 4567899999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|++.+.+. |+.||+||.|+||||+.+|+.|++
T Consensus 141 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~ 219 (484)
T 3ros_A 141 IRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAE 219 (484)
T ss_dssp HHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999997777788 999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 220 ~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 299 (484)
T 3ros_A 220 AAGKNLKKSTMELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLE 299 (484)
T ss_dssp HHHHTTCEEEEECCCCCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTS
T ss_pred HHhccCCceEeecCCCCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHH
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ea 327 (410)
+++++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 300 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 379 (484)
T 3ros_A 300 ADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAA 379 (484)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHH
T ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHH
Confidence 99999999999999999999999999999999999764346899999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 015249 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 406 (410)
Q Consensus 328 i~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 406 (410)
|+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|++|+++|++.|+|+++.
T Consensus 380 i~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 458 (484)
T 3ros_A 380 IQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVT 458 (484)
T ss_dssp HHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECG
T ss_pred HHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECC
Confidence 9999999999999999999999999999999999999998777899999999999999999999999999999999864
No 6
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=4.4e-90 Score=702.94 Aligned_cols=398 Identities=44% Similarity=0.732 Sum_probs=379.2
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEe-eeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLK-QPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~i~p~n~p~~~ 86 (410)
++++.++++++++|+||++.+++.|+..+++.++|++...+++.++..+.. .+...++.+ +|+|||++|+|||||+..
T Consensus 85 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 163 (506)
T 3rh9_A 85 KENREEIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPEK-PKDCTWTVHYRPVGVTGLIVPWNFPIGM 163 (506)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGGCCEECSCC-GGGCEEEEEEEECCSEEEECCSSSTTHH
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceeeEeecccceEEEEECCCchHHHH
Confidence 445677799999999999999999999999999999999988877654432 456678888 999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.+..|+.||+||.|+||||+.+|+.|+
T Consensus 164 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~ 243 (506)
T 3rh9_A 164 IAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLI 243 (506)
T ss_dssp HHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998788999999999999999999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
+.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.
T Consensus 244 ~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 323 (506)
T 3rh9_A 244 VDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGM 323 (506)
T ss_dssp HHTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTT
T ss_pred HHhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC-CCceecceEeccCCCCCcccccceecceeeeeecCCHH
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL-GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~-~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 325 (410)
++++++||++++.+++++.++|++++++|+++++||...+. +|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 324 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 403 (506)
T 3rh9_A 324 NDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEE 403 (506)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred ccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHH
Confidence 99999999999999999999999999999999999976333 68999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 326 eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
|||+++|+++|||+++|||+|.++++++++++++|+|+||+++...+.+||||+|+||+|+++|++|+++||+.|+|+++
T Consensus 404 eAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~ 483 (506)
T 3rh9_A 404 EVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRG 483 (506)
T ss_dssp HHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEc
Confidence 99999999999999999999999999999999999999999988788999999999999999999999999999999886
Q ss_pred c
Q 015249 406 D 406 (410)
Q Consensus 406 ~ 406 (410)
.
T Consensus 484 ~ 484 (506)
T 3rh9_A 484 F 484 (506)
T ss_dssp -
T ss_pred C
Confidence 4
No 7
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.2e-89 Score=703.14 Aligned_cols=399 Identities=39% Similarity=0.616 Sum_probs=379.9
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++.+|+||++.+++.|+..+++.++|++...+++.++..+....+...++.++|+|||++|+|||||+...
T Consensus 99 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 178 (528)
T 3u4j_A 99 LARQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIA 178 (528)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHH
Confidence 34566779999999999999999999999999999999998876655443324667889999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.+..|+.||+||.|+||||+.+|+.|++
T Consensus 179 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~ 258 (528)
T 3u4j_A 179 SERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGE 258 (528)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977889999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 259 ~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 338 (528)
T 3u4j_A 259 IAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLN 338 (528)
T ss_dssp HHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTS
T ss_pred HHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC-CCceecceEeccCCCCCcccccceecceeeeeecCCHHH
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL-GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~-~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 326 (410)
+++++||++++.+++++.++|++++++|+++++||..... +|+|++|||+.+++++|++++||+||||++|++|+|.||
T Consensus 339 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 418 (528)
T 3u4j_A 339 ERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADE 418 (528)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred cCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHH
Confidence 9999999999999999999999999999999999976532 689999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 015249 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 406 (410)
Q Consensus 327 ai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 406 (410)
||+++|+++|||+++|||+|.++++++++++++|+|+||+.+...+.+||||+|+||+|+++|++|+++|++.|+|+++.
T Consensus 419 Ai~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 498 (528)
T 3u4j_A 419 AVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTL 498 (528)
T ss_dssp HHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEES
T ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEeC
Confidence 99999999999999999999999999999999999999998877889999999999999999999999999999998863
No 8
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=7.4e-90 Score=702.95 Aligned_cols=398 Identities=37% Similarity=0.620 Sum_probs=376.0
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccCC---CCCcceeEEeeeceEEEEEcCCCcc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPAT---LPDRRLFVLKQPVGVAGAITPWNFP 83 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~p 83 (410)
++++.++++++++|+|||+.+++ .|+..+++.++|++.+++++.++..+.. .++...++.++|+|||++|+|||||
T Consensus 112 ~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P 191 (517)
T 2o2p_A 112 EQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYP 191 (517)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSH
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcch
Confidence 44567779999999999999998 8999999999999999988766543321 2233578999999999999999999
Q ss_pred hhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 84 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 84 ~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
+...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|.+.+.+..|+.||+|+.|+||||+.+|+
T Consensus 192 ~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~ 271 (517)
T 2o2p_A 192 LMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGK 271 (517)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999999999999999999997778899999999999999999999999
Q ss_pred HHHHHhc-cccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhccc
Q 015249 164 KLMAGAA-GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 242 (410)
Q Consensus 164 ~i~~~~~-~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~ 242 (410)
.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 272 ~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~v 351 (517)
T 2o2p_A 272 HIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKI 351 (517)
T ss_dssp HHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred HHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCC
Confidence 9999998 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 243 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 243 g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
|+|.++++++||++++.+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 352 Gdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 431 (517)
T 2o2p_A 352 GNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFA 431 (517)
T ss_dssp SCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEEC
T ss_pred CCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcC
Confidence 99999999999999999999999999999999999999997643358999999999999999999999999999999999
Q ss_pred C--HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheee
Q 015249 323 T--EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 400 (410)
Q Consensus 323 ~--~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k 400 (410)
| +||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|.+++++|++.|
T Consensus 432 ~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k 511 (517)
T 2o2p_A 432 DGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIK 511 (517)
T ss_dssp TTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBSHHHHHHTTEEEE
T ss_pred CCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccChHHHHHHhCCce
Confidence 9 99999999999999999999999999999999999999999998777789999999999999999999999999999
Q ss_pred EEEEe
Q 015249 401 YVCLG 405 (410)
Q Consensus 401 ~v~~~ 405 (410)
+|+++
T Consensus 512 ~v~~~ 516 (517)
T 2o2p_A 512 TVTFE 516 (517)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 99874
No 9
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=2.1e-89 Score=699.05 Aligned_cols=398 Identities=41% Similarity=0.665 Sum_probs=377.9
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccc-c--CCCCCcceeEEeeeceEEEEEcCCCcch
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEII-P--ATLPDRRLFVLKQPVGVAGAITPWNFPL 84 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~P~Gvv~~i~p~n~p~ 84 (410)
++++.++++++++|+|||+.+++.|+..+++.++|++.+.+++.+... + ....+...++.++|+|||++|+|||||+
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~ 165 (503)
T 3iwj_A 86 TEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPM 165 (503)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHH
Confidence 445667799999999999999999999999999999999988766432 1 1124567889999999999999999999
Q ss_pred hhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHH
Q 015249 85 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 164 (410)
Q Consensus 85 ~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~ 164 (410)
...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.
T Consensus 166 ~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~ 245 (503)
T 3iwj_A 166 LMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSK 245 (503)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987889999999999999999999999999
Q ss_pred HHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCC
Q 015249 165 LMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 244 (410)
Q Consensus 165 i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~ 244 (410)
|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+
T Consensus 246 i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 325 (503)
T 3iwj_A 246 IMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISD 325 (503)
T ss_dssp HHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred HHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 245 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 245 ~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~--~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
|.++++++||++++.+++++.+++++++++|+++++||...+ .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 326 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 405 (503)
T 3iwj_A 326 PLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFS 405 (503)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeC
Confidence 999999999999999999999999999999999999997653 468999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
|.||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|++.|+|
T Consensus 406 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v 485 (503)
T 3iwj_A 406 TEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQV 485 (503)
T ss_dssp SHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHHHHHhhCeEEE
Confidence 99999999999999999999999999999999999999999999877788999999999999999999999999999999
Q ss_pred EEe
Q 015249 403 CLG 405 (410)
Q Consensus 403 ~~~ 405 (410)
+++
T Consensus 486 ~~~ 488 (503)
T 3iwj_A 486 TQY 488 (503)
T ss_dssp EEE
T ss_pred EEe
Confidence 886
No 10
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=2.9e-89 Score=695.41 Aligned_cols=398 Identities=57% Similarity=0.985 Sum_probs=379.1
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++++|+||++.+++.|+..+++.++|++....+..++..+...++...++.++|+|||++|+|||||++..
T Consensus 83 ~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 162 (481)
T 3jz4_A 83 MEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMI 162 (481)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHH
Confidence 34556779999999999999999999999999999999987766654443345677889999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|++
T Consensus 163 ~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~ 242 (481)
T 3jz4_A 163 TRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLME 242 (481)
T ss_dssp HHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987889999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 243 ~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 322 (481)
T 3jz4_A 243 QCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLD 322 (481)
T ss_dssp HHTTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTS
T ss_pred HHhhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHH
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ea 327 (410)
+++++||++++.+++++.+++++++++|+++++||...+.+++|++|||+.+++++|++++||+||||++|++|+|.|||
T Consensus 323 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 402 (481)
T 3jz4_A 323 NGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADV 402 (481)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHH
T ss_pred CcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHH
Confidence 99999999999999999999999999999999999764345799999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 328 i~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
|+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|++|+++|++.|+|+++
T Consensus 403 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 403 IAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp HHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 999999999999999999999999999999999999999887788999999999999999999999999999999875
No 11
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=7.4e-90 Score=700.56 Aligned_cols=397 Identities=35% Similarity=0.601 Sum_probs=377.9
Q ss_pred HHHHHHHHHHHHHHhhchHHHH-HHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLL-LREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a-~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
+++++++++++.+|+|||+.++ +.|+..+++.++|++...+++.++..+...++...++.++|+|||++|+|||||+..
T Consensus 98 ~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 177 (498)
T 4f3x_A 98 EKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMM 177 (498)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHH
Confidence 3456677999999999999999 889999999999999998876665443323467788999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|.
T Consensus 178 ~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~ 256 (498)
T 4f3x_A 178 MAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVL 256 (498)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 9999999999999999999999999999999999999 999999999998888999999999999999999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
+.+++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.
T Consensus 257 ~~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~ 336 (498)
T 4f3x_A 257 AAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDD 336 (498)
T ss_dssp HHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSS
T ss_pred HHHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCC-eEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHH
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGA-KVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga-~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 325 (410)
|+++++||++++.+++++.++|++++++|+ ++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+|.|
T Consensus 337 d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 416 (498)
T 4f3x_A 337 DTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKD 416 (498)
T ss_dssp GGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTS
T ss_pred cccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHH
Confidence 999999999999999999999999999999 9999997643468999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 326 eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
|||+++|+++|||+++|||+|.++++++++++++|+|+||+++...+.+||||+|+||+|+++|.+++++||+.|+|+++
T Consensus 417 eAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~ 496 (498)
T 4f3x_A 417 DAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMIN 496 (498)
T ss_dssp CHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEE
T ss_pred HHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999999999887778999999999999999999999999999999875
No 12
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=1.8e-89 Score=698.67 Aligned_cols=399 Identities=38% Similarity=0.650 Sum_probs=377.0
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
+++++++++++.+|+||++.+++.|+..+++.++|++...+++.++..+....+...++.++|+|||++|+|||||+...
T Consensus 86 ~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 165 (497)
T 3k2w_A 86 RENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALA 165 (497)
T ss_dssp HTTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHH
Confidence 34556779999999999999999999999999999999988776654443335677889999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..|++++.++|+|+|++|+++|++.+.+..|+.||+||.|+||||+.+|+.|++
T Consensus 166 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~ 245 (497)
T 3k2w_A 166 GRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYK 245 (497)
T ss_dssp HHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977889999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 246 ~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~ 325 (497)
T 3k2w_A 246 TSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMD 325 (497)
T ss_dssp HHTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTS
T ss_pred HhhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcc--cC--CCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR--HS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~--~~--~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+++++||++++.+++++.+++++++++|+++++||.. .+ .+|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 326 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 405 (497)
T 3k2w_A 326 ADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSS 405 (497)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESC
T ss_pred CCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCC
Confidence 9999999999999999999999999999999999973 22 2589999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
+||||+++|+++|||+++|||+|.++++++++++++|+|+||+++...+.+||||+|+||+|+++|++|+++|++.|+|+
T Consensus 406 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~ 485 (497)
T 3k2w_A 406 MEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVY 485 (497)
T ss_dssp HHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchHHHHHHhcceEEEE
Confidence 99999999999999999999999999999999999999999998887889999999999999999999999999999998
Q ss_pred Eec
Q 015249 404 LGD 406 (410)
Q Consensus 404 ~~~ 406 (410)
++.
T Consensus 486 ~~~ 488 (497)
T 3k2w_A 486 INE 488 (497)
T ss_dssp EEC
T ss_pred EEc
Confidence 863
No 13
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=1e-88 Score=692.59 Aligned_cols=397 Identities=41% Similarity=0.648 Sum_probs=375.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
+++++++++++.+|+||++.++. .|+..+++.++|++...+++.++..+. ..+...++.++|+|||++|+|||||+..
T Consensus 97 ~~~~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 175 (501)
T 1bxs_A 97 ERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM-DGNFFTYTRSEPVGVCGQIIPWNFPLLM 175 (501)
T ss_dssp HHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeec-cCCcceeEEecCCceEEEECCCcchHHH
Confidence 44567779999999999999875 699999999999999988876654332 2455678999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|+
T Consensus 176 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~ 255 (501)
T 1bxs_A 176 FLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIK 255 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997788899999999999999999999999999
Q ss_pred HHhc-cccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCC
Q 015249 167 AGAA-GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 167 ~~~~-~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~ 245 (410)
+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 256 ~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 335 (501)
T 1bxs_A 256 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNP 335 (501)
T ss_dssp HHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCT
T ss_pred HHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCC
Confidence 9999 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHH
Q 015249 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325 (410)
Q Consensus 246 ~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 325 (410)
.|+++++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 336 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 415 (501)
T 1bxs_A 336 LTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLD 415 (501)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred cccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHH
Confidence 99999999999999999999999999999999999997642357999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 326 eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 416 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~ 495 (501)
T 1bxs_A 416 DVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIK 495 (501)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEc
Confidence 99999999999999999999999999999999999999999877778999999999999999999999999999999886
No 14
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.5e-88 Score=694.17 Aligned_cols=397 Identities=37% Similarity=0.602 Sum_probs=375.9
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++.+|+||++.+++.|+..+++.++|++.+.+++.++..+...++...++.++|+|||++|+|||||+...
T Consensus 100 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 179 (515)
T 2d4e_A 100 EKHADELAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLS 179 (515)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhh
Confidence 34566779999999999999999999999999999999988876654443234556789999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|++
T Consensus 180 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~ 259 (515)
T 2d4e_A 180 TWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMR 259 (515)
T ss_dssp HHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred hhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977788999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 260 ~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~ 339 (515)
T 2d4e_A 260 NAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLD 339 (515)
T ss_dssp HHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTS
T ss_pred HHhhcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--------CCCceecceEeccCCCCCcccccceecceeeee
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--------LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLL 319 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~--------~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~ 319 (410)
+++++||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+ +++|++++||+||||++|+
T Consensus 340 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~ 418 (515)
T 2d4e_A 340 PETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAI 418 (515)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEE
T ss_pred ccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEE
Confidence 999999999999999999999999999999999997642 1589999999999 9999999999999999999
Q ss_pred ecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhhee
Q 015249 320 CFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEI 399 (410)
Q Consensus 320 ~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~ 399 (410)
+|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|.+|+++|++.
T Consensus 419 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~ 498 (515)
T 2d4e_A 419 PFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDL 498 (515)
T ss_dssp EESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSHHHHHHHHEEE
T ss_pred eeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhCce
Confidence 99999999999999999999999999999999999999999999999877778999999999999999999999999999
Q ss_pred eEEEEe
Q 015249 400 KYVCLG 405 (410)
Q Consensus 400 k~v~~~ 405 (410)
|+|+++
T Consensus 499 K~v~~~ 504 (515)
T 2d4e_A 499 KTIALP 504 (515)
T ss_dssp EEEEEE
T ss_pred eEEEEc
Confidence 999886
No 15
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=6.6e-89 Score=694.89 Aligned_cols=396 Identities=40% Similarity=0.608 Sum_probs=375.4
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++.+|+|||+.+++.|+..+++.++|++.+.+++.++..+.. ++...++.++|+|||++|+|||||+...
T Consensus 94 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 172 (503)
T 1a4s_A 94 RERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIA 172 (503)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECG-GGCEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceeEEEEecCceEEEECCCcchHHHH
Confidence 345667799999999999999999999999999999999988766543322 3446789999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++ +.+..|+.||+|+.|+||||+.+|+.|++
T Consensus 173 ~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~ 251 (503)
T 1a4s_A 173 AWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVME 251 (503)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977 88999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.+++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 252 ~aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 331 (503)
T 1a4s_A 252 MSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLL 331 (503)
T ss_dssp HHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTS
T ss_pred HhhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc--C----CCCceecceEeccCCCCCcccccceecceeeeeec
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH--S----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 321 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~--~----~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~ 321 (410)
+++++||++++.+++++.+++++++++|+++++||... + ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 332 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 411 (503)
T 1a4s_A 332 TETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPF 411 (503)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred cCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEec
Confidence 99999999999999999999999999999999999754 1 24899999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 015249 322 KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 401 (410)
Q Consensus 322 ~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~ 401 (410)
+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|.+|+++|++.|+
T Consensus 412 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~ 491 (503)
T 1a4s_A 412 DTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKT 491 (503)
T ss_dssp CCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEEE
T ss_pred CCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcCceE
Confidence 99999999999999999999999999999999999999999999987777889999999999999999999999999999
Q ss_pred EEEe
Q 015249 402 VCLG 405 (410)
Q Consensus 402 v~~~ 405 (410)
|+++
T Consensus 492 v~~~ 495 (503)
T 1a4s_A 492 VIVE 495 (503)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9885
No 16
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=8.5e-89 Score=693.07 Aligned_cols=398 Identities=39% Similarity=0.594 Sum_probs=375.8
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
++++.++++++.+|+||++.++. .|+..+++.++|++...+++.++..+. ..+...++.++|+|||++|+|||||+..
T Consensus 96 ~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 174 (500)
T 1o04_A 96 ERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPI-DGDFFSYTRHEPVGVCGQIIPWNFPLLM 174 (500)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceec-CCCceEEEEEecCCcEEEECCCCchHHH
Confidence 45567779999999999999875 699999999999999887776654332 2355678999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|.+.+.+..|+.||+|+.|+||||+.+|+.|+
T Consensus 175 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~ 254 (500)
T 1o04_A 175 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQ 254 (500)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997778999999999999999999999999999
Q ss_pred HHhc-cccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCC
Q 015249 167 AGAA-GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 167 ~~~~-~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~ 245 (410)
+.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 255 ~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 334 (500)
T 1o04_A 255 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNP 334 (500)
T ss_dssp HHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCT
T ss_pred HhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCc
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHH
Q 015249 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325 (410)
Q Consensus 246 ~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 325 (410)
.++++++||++++.+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 335 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 414 (500)
T 1o04_A 335 FDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIE 414 (500)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred ccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHH
Confidence 99999999999999999999999999999999999997642358999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 326 eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 415 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~ 494 (500)
T 1o04_A 415 EVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK 494 (500)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEE
T ss_pred HHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEe
Confidence 99999999999999999999999999999999999999999877678999999999999999999999999999999886
Q ss_pred c
Q 015249 406 D 406 (410)
Q Consensus 406 ~ 406 (410)
.
T Consensus 495 ~ 495 (500)
T 1o04_A 495 V 495 (500)
T ss_dssp C
T ss_pred c
Confidence 3
No 17
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=1.4e-88 Score=689.98 Aligned_cols=398 Identities=40% Similarity=0.676 Sum_probs=376.0
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++.+|+||++.+++.|+..+++.++|++...+++.+...+...++...++.++|+|||++|+|||||+...
T Consensus 80 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 159 (479)
T 2imp_A 80 RERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLI 159 (479)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHH
Confidence 34567779999999999999999999999999999999887766654333223556789999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.||+++.|.||||+.+|+.|++
T Consensus 160 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~ 239 (479)
T 2imp_A 160 ARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMA 239 (479)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977778999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 240 ~aa~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 319 (479)
T 2imp_A 240 TAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAE 319 (479)
T ss_dssp HHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTT
T ss_pred HHhccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHH
Q 015249 248 -EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326 (410)
Q Consensus 248 -~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 326 (410)
+++++||++++.+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 320 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~e 399 (479)
T 2imp_A 320 RNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLED 399 (479)
T ss_dssp CSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHH
T ss_pred cCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHH
Confidence 9999999999999999999999999999999999975323479999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 015249 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 327 ai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|.+++++|++.|+|+++
T Consensus 400 Ai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 400 AISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp HHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 9999999999999999999999999999999999999999877678999999999999999999999999999999875
No 18
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=1.9e-88 Score=691.33 Aligned_cols=393 Identities=34% Similarity=0.553 Sum_probs=371.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCC-C----CcceeEEeeeceEEEEEcCCCc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATL-P----DRRLFVLKQPVGVAGAITPWNF 82 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~P~Gvv~~i~p~n~ 82 (410)
++++.++++++++|+|||+.+++.|+..+++.++|++....++.++..+... + +...++.++|+|||++|+||||
T Consensus 85 ~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~ 164 (505)
T 3prl_A 85 EERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNY 164 (505)
T ss_dssp HHTHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSS
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCcc
Confidence 3455677999999999999999999999999999999998876665433211 2 4567889999999999999999
Q ss_pred chhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHH
Q 015249 83 PLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 162 (410)
Q Consensus 83 p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~ 162 (410)
|+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|++.+.+..|+.||+||.|+||||+.+|
T Consensus 165 P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G 244 (505)
T 3prl_A 165 PVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTG 244 (505)
T ss_dssp TTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999778899999999999999999999999
Q ss_pred HHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhccc
Q 015249 163 KKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 242 (410)
Q Consensus 163 ~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~ 242 (410)
+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 245 ~~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 322 (505)
T 3prl_A 245 ERISEKAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTV 322 (505)
T ss_dssp HHHHHHCC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCB
T ss_pred HHHHHHcc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhccc
Confidence 99999887 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 243 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 243 g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
|+|. +++++||++++.+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 323 g~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 398 (505)
T 3prl_A 323 GSPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVK 398 (505)
T ss_dssp SCTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeC
Confidence 9999 9999999999999999999999999999999999975 37999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 401 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~ 401 (410)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+++. ..+.+||||+|+||+|+++|.+|+++|++.|+
T Consensus 399 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~ 478 (505)
T 3prl_A 399 DANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERV 478 (505)
T ss_dssp SHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEEE
T ss_pred CHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceEE
Confidence 99999999999999999999999999999999999999999999876 56889999999999999999999999999999
Q ss_pred EEEec
Q 015249 402 VCLGD 406 (410)
Q Consensus 402 v~~~~ 406 (410)
|+++.
T Consensus 479 v~~~~ 483 (505)
T 3prl_A 479 TVLNL 483 (505)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 98863
No 19
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=4.2e-88 Score=684.41 Aligned_cols=398 Identities=34% Similarity=0.518 Sum_probs=377.9
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
+++++++++++++|+||++.+++.|+..+++.++|++...+++.+.. +...++...++.++|+|||++|+|||||++..
T Consensus 65 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 143 (462)
T 3etf_A 65 RAHAEEMAQCITREMGKPIKQARAEVTKSAALCDWYAEHGPAMLNPE-PTLVENQQAVIEYRPLGVILAIMPWNFPLWQV 143 (462)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCE-ECSSGGGCEEEEEEECSEEEEECCSSSTTHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCCc-ccCCCCceeEEEeecCcEEEEECCCchHHHHH
Confidence 34566779999999999999999999999999999999988877654 32334567889999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|+ .+.+..|+.||+++.|+||||+.+|+.|.+
T Consensus 144 ~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aglP~gv~~vv~g~-~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~ 222 (462)
T 3etf_A 144 LRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAGVYGWVNAN-NEGVSQMINDPRIAAVTVTGSVRAGAAIGA 222 (462)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHTTCCBTTEEECCCC-HHHHHHHHTSTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcCeEEEEECC-HHHHHHHhcCCCCCEEEEeCCchHHHHHHH
Confidence 9999999999999999999999999999999999999999999999984 677889999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++.+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.+
T Consensus 223 ~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 302 (462)
T 3etf_A 223 QAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLV 302 (462)
T ss_dssp HHHHTTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTS
T ss_pred HHhccCCceEEEcCCCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHH
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 327 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ea 327 (410)
+++++||++++.+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 303 ~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deA 382 (462)
T 3etf_A 303 EENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHA 382 (462)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred ccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHH
Confidence 99999999999999999999999999999999999754446899999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEecc
Q 015249 328 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 407 (410)
Q Consensus 328 i~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~~~ 407 (410)
|+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.+
T Consensus 383 i~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r~ 462 (462)
T 3etf_A 383 LALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNRV 462 (462)
T ss_dssp HHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECCC
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEecC
Confidence 99999999999999999999999999999999999999988778899999999999999999999999999999998764
No 20
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=4.9e-88 Score=692.61 Aligned_cols=397 Identities=30% Similarity=0.486 Sum_probs=375.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH-HHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEE-AKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
++++.++++++++|+|||+.+++.|+..+++.++|++.. .+...++..+.. .+...++.++|+|||++|+|||||+..
T Consensus 110 ~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~ 188 (538)
T 3qan_A 110 RRRKHEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEILSR-PGEQNRYFYTPMGVTVTISPWNFALAI 188 (538)
T ss_dssp HHTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBCCCCC-TTEEEEEEEEECCEEEEECCSTTTTHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccc-CCcceeeecCCCcEEEEECCCchHHHH
Confidence 345677799999999999999999999999999999998 666666554432 467788999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|+
T Consensus 189 ~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~ 268 (538)
T 3qan_A 189 MVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLY 268 (538)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998788999999999999999999999999999
Q ss_pred HHhccc------cceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhc
Q 015249 167 AGAAGT------VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNL 240 (410)
Q Consensus 167 ~~~~~~------~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~ 240 (410)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++
T Consensus 269 ~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 348 (538)
T 3qan_A 269 ERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNL 348 (538)
T ss_dssp HHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTC
T ss_pred HHhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhc
Confidence 999988 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeee
Q 015249 241 KVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 320 (410)
Q Consensus 241 ~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~ 320 (410)
++|+|.++++++||++++.+++++.++|++++.+| ++++||.....+|+|++|||+.+++++|++++||+||||++|++
T Consensus 349 ~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~ 427 (538)
T 3qan_A 349 TVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSK 427 (538)
T ss_dssp CBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred cCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEE
Confidence 99999999999999999999999999999999999 99999986533589999999999999999999999999999999
Q ss_pred cCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEC-CCCCC-CCCCCccCCCCCCCC-CCChHHHHHhhh
Q 015249 321 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVN-EGLIS-TEVAPFGGVKQSGLG-REGSKYGMDEFL 397 (410)
Q Consensus 321 ~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN-~~~~~-~~~~pfGg~~~SG~g-~~~g~~~l~~~~ 397 (410)
|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+|| +.+.. .+.+||||+|.||+| +++|++||++|+
T Consensus 428 ~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft 507 (538)
T 3qan_A 428 ANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHM 507 (538)
T ss_dssp ESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGE
T ss_pred eCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 55554 789999999999999 999999999999
Q ss_pred eeeEEEEec
Q 015249 398 EIKYVCLGD 406 (410)
Q Consensus 398 ~~k~v~~~~ 406 (410)
+.|+|+++.
T Consensus 508 ~~k~v~~~~ 516 (538)
T 3qan_A 508 QAKTVSEMY 516 (538)
T ss_dssp EEEEEEEEC
T ss_pred CeEEEEEec
Confidence 999998864
No 21
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=2.1e-88 Score=689.37 Aligned_cols=396 Identities=37% Similarity=0.621 Sum_probs=374.2
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHH-HHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLR-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~-ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
++++.++++++.+|+|||+.+++. |+..+++.++|++...+++.++..+...++...++.++|+|||++|+|||||+..
T Consensus 96 ~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 175 (495)
T 1wnd_A 96 EENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMM 175 (495)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHH
Confidence 345667799999999999999998 9999999999999988776665433221345678899999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|++.+.+..|+.||+||.|+||||+.+|+.|+
T Consensus 176 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~ 254 (495)
T 1wnd_A 176 AAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHII 254 (495)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 9999999999999999999999999999999999999 999999999997778899999999999999999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
+.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.
T Consensus 255 ~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 334 (495)
T 1wnd_A 255 SHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPD 334 (495)
T ss_dssp HHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTT
T ss_pred HHHHhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCC-CeEeeCCc-ccCCCCceecceEeccCCCCCcccccceecceeeeeecCCH
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKG-AKVLLGGR-RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~g-a~~~~gg~-~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~ 324 (410)
++++++||++++.+++++.+++++++++| +++++||. .. ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 335 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 413 (495)
T 1wnd_A 335 DESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNE 413 (495)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred cCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCH
Confidence 99999999999999999999999999999 99999997 43 25799999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 015249 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 325 ~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~ 404 (410)
||||+++|+++|||+++|||+|.++++++++++++|+|+||+.....+.+||||+|.||+|+++|.+|+++|++.|+|++
T Consensus 414 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~ 493 (495)
T 1wnd_A 414 EQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMV 493 (495)
T ss_dssp HHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEe
Confidence 99999999999999999999999999999999999999999987777899999999999999999999999999999986
Q ss_pred e
Q 015249 405 G 405 (410)
Q Consensus 405 ~ 405 (410)
+
T Consensus 494 ~ 494 (495)
T 1wnd_A 494 K 494 (495)
T ss_dssp E
T ss_pred c
Confidence 4
No 22
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.7e-88 Score=691.97 Aligned_cols=397 Identities=25% Similarity=0.428 Sum_probs=373.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++++|+||++.+++.|+..+++.++|++.+++...++..+...++...++.++|+|||++|+|||||+...
T Consensus 100 ~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 179 (521)
T 4e4g_A 100 NDNMNELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIP 179 (521)
T ss_dssp HHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHH
Confidence 45667779999999999999999999999999999999887766554332224567889999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|+ .+.+..|+.||+|+.|+||||+.+|+.|++
T Consensus 180 ~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~ 258 (521)
T 4e4g_A 180 MWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVYG 258 (521)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999995 566799999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecc-hHHHHHHHHHHHHhhcccCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG-IYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~-~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++ ++|+|+++|+++++++++|+|.
T Consensus 259 ~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~ 338 (521)
T 4e4g_A 259 TAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYT 338 (521)
T ss_dssp HHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTT
T ss_pred HHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~----~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
++++++||++++.+++++.++|++++.+|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 339 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 418 (521)
T 4e4g_A 339 DEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRAR 418 (521)
T ss_dssp CTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBS
T ss_pred CccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeC
Confidence 9999999999999999999999999999999999997521 358999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCCCCCCCC--CCChHHHHHhhhee
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG--REGSKYGMDEFLEI 399 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGg~~~SG~g--~~~g~~~l~~~~~~ 399 (410)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+++.. .+.+||||+|.||+| +++|++|+++|++.
T Consensus 419 ~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~ 498 (521)
T 4e4g_A 419 NYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRT 498 (521)
T ss_dssp SHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHTEEE
T ss_pred CHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHhheE
Confidence 999999999999999999999999999999999999999999998654 478999999999999 78999999999999
Q ss_pred eEEEEe
Q 015249 400 KYVCLG 405 (410)
Q Consensus 400 k~v~~~ 405 (410)
|+|+++
T Consensus 499 K~v~~~ 504 (521)
T 4e4g_A 499 KTITSR 504 (521)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 999886
No 23
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.5e-88 Score=691.01 Aligned_cols=395 Identities=34% Similarity=0.567 Sum_probs=374.1
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
++++.++++++.+|+||++.+++ .|+..+++.++|++...+++.++..+. ..+...++.++|+|||++|+|||||+..
T Consensus 84 ~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 162 (495)
T 3b4w_A 84 AERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRT-GSYGQSIVSREPVGVVGAIVAWNVPLFL 162 (495)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEE-ETTEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccC-CCCceEEEEEccCceEEEECCCcchHHH
Confidence 34566779999999999999998 899999999999999888776654332 1244678999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++| +.+.+..|+.||+|+.|+||||+.+|+.|+
T Consensus 163 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~ 241 (495)
T 3b4w_A 163 AVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVG 241 (495)
T ss_dssp HHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 788999999999999999999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
+.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.
T Consensus 242 ~~aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 321 (495)
T 3b4w_A 242 RRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPS 321 (495)
T ss_dssp HHHHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTT
T ss_pred HHhhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceecceEeccCCCCCcccccceecceeeeeecCCH
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~--~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~ 324 (410)
++++++||++++.+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 322 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 401 (495)
T 3b4w_A 322 DPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTE 401 (495)
T ss_dssp CTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred cCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCH
Confidence 9999999999999999999999999999999999997642 25899999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 015249 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 325 ~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~ 404 (410)
||||+++|+++|||+++|||+|.++++++++++++|+|+||++. ..+.+||||+|.||+|+++|.+|+++|++.|+|++
T Consensus 402 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~ 480 (495)
T 3b4w_A 402 EDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLL 480 (495)
T ss_dssp HHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEC
T ss_pred HHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEE
Confidence 99999999999999999999999999999999999999999987 77899999999999999999999999999999987
Q ss_pred e
Q 015249 405 G 405 (410)
Q Consensus 405 ~ 405 (410)
+
T Consensus 481 ~ 481 (495)
T 3b4w_A 481 P 481 (495)
T ss_dssp C
T ss_pred c
Confidence 5
No 24
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=9.3e-88 Score=684.97 Aligned_cols=393 Identities=35% Similarity=0.587 Sum_probs=367.4
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEE-eeeceEEEEEcCCCcchh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVL-KQPVGVAGAITPWNFPLA 85 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~Gvv~~i~p~n~p~~ 85 (410)
+++++++++++.+|+|||+.+++ .|+..+++.+++++............ ..+...++. ++|+|||++|+|||||+.
T Consensus 99 ~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 176 (497)
T 3i44_A 99 EKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL--IEGNEQAILHYDAIGVVGLITPWNWPMN 176 (497)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES--STTCSSCEEEEEECCEEEEECCSSSHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc--cCCceeEEEeecCceEEEEECCCcchHH
Confidence 44566779999999999999999 79999999999999876553322111 124456778 999999999999999999
Q ss_pred hhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHH
Q 015249 86 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 165 (410)
Q Consensus 86 ~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i 165 (410)
..++++++||++||+||+|||+.+|.++..|++++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|
T Consensus 177 ~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i 256 (497)
T 3i44_A 177 QVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDI 256 (497)
T ss_dssp HHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCC
Q 015249 166 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 166 ~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~ 245 (410)
.+.+++++||+++|+|||||+||++||| +.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 257 ~~~aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p 335 (497)
T 3i44_A 257 SKNASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPG 335 (497)
T ss_dssp HHHHHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCT
T ss_pred HHHHhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 9999999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCc-ccC--CCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR-RHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 246 ~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~-~~~--~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
.++++++||++++.+++++.++|++++++|+++++||. ... ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 336 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 415 (497)
T 3i44_A 336 HQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFN 415 (497)
T ss_dssp TSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecC
Confidence 99999999999999999999999999999999999994 322 258999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||. ....+.+||||+|.||+|+++|.+++++||+.|+|
T Consensus 416 ~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v 494 (497)
T 3i44_A 416 TEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAI 494 (497)
T ss_dssp SHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcceeEE
Confidence 99999999999999999999999999999999999999999994 45578899999999999999999999999999998
Q ss_pred EE
Q 015249 403 CL 404 (410)
Q Consensus 403 ~~ 404 (410)
+.
T Consensus 495 ~~ 496 (497)
T 3i44_A 495 SY 496 (497)
T ss_dssp SC
T ss_pred Ee
Confidence 53
No 25
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.8e-88 Score=692.67 Aligned_cols=394 Identities=36% Similarity=0.576 Sum_probs=373.4
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHH----HhCccccCCCCCcceeEEeeeceEEEEEcCCCcc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKR----VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFP 83 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p 83 (410)
++++.++++++++|+||++.++ |+..+++.++|++.+.++ +.++..+. .++. .++.++|+|||++|+|||||
T Consensus 88 ~~~~~ela~~~~~e~Gk~~~ea--ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~-~~~~-~~~~~~P~GVV~~I~PwN~P 163 (517)
T 3r31_A 88 RERNDALSTLETLDTGKPIQET--IVADPTSGADAFEFFGGIAPSALNGDYIPL-GGDF-AYTKRVPLGVCVGIGAWNYP 163 (517)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHH--HHHSHHHHHHHHHHHHHHHHHHTCCCEEEC-SSSE-EEEEEEECSEEEEECCSSSH
T ss_pred HHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHhhhccccccCccccc-CCCc-ceEEEcCccEEEEECCCcch
Confidence 3456677999999999999999 999999999999999887 65654443 2345 89999999999999999999
Q ss_pred hhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 84 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 84 ~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++| +.+.+..|+.||+||.|+||||+.+|+
T Consensus 164 ~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~ 242 (517)
T 3r31_A 164 QQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGR 242 (517)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 788999999999999999999999999
Q ss_pred HHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 164 KLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 164 ~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 243 ~i~~~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 322 (517)
T 3r31_A 243 KVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILG 322 (517)
T ss_dssp HHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred HHHHHhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC---CCCceecceEeccCCCCCcccccceecceeeeee
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 320 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~---~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~ 320 (410)
+|.++++++||++++.+++++.++|++++++|+++++||...+ .+|+|++|||+.+++++|++++||+||||++|++
T Consensus 323 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 402 (517)
T 3r31_A 323 DPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLD 402 (517)
T ss_dssp CTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEE
T ss_pred CCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEE
Confidence 9999999999999999999999999999999999999993121 3589999999999999999999999999999999
Q ss_pred cCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheee
Q 015249 321 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 400 (410)
Q Consensus 321 ~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k 400 (410)
|+|.||||+++|+++|||+++|||+|.++++++++++++|+|+||+.+...+.+||||+|+||+|+++|++|+++|++.|
T Consensus 403 ~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K 482 (517)
T 3r31_A 403 FDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELK 482 (517)
T ss_dssp ECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGGGGGGSEEEE
T ss_pred eCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceE
Confidence 99999999999999999999999999999999999999999999998877899999999999999999999999999999
Q ss_pred EEEEec
Q 015249 401 YVCLGD 406 (410)
Q Consensus 401 ~v~~~~ 406 (410)
+|+++.
T Consensus 483 ~v~~~~ 488 (517)
T 3r31_A 483 TVYVST 488 (517)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 998863
No 26
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=3.1e-88 Score=687.94 Aligned_cols=397 Identities=59% Similarity=0.949 Sum_probs=376.1
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++.+|+||++.+++.|+..+++.++|++...+++.++..+...++...++.++|+|||++|+|||||+...
T Consensus 84 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 163 (487)
T 2w8n_A 84 IQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMI 163 (487)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHH
Confidence 34566779999999999999999999999999999999988766654433234567789999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEe---CCchhHHhHHhcCCCccEEEEeCcHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM---GNAPDIGDALLTSPQVRKITFTGSTAVGKK 164 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~---g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~ 164 (410)
++++++||++||+||+|||+.+|.++..|++++.++|+|+|++|+++ |++.+.+..|+.||+|+.|+||||+.+|+.
T Consensus 164 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~ 243 (487)
T 2w8n_A 164 TRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKI 243 (487)
T ss_dssp HHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999 866778999999999999999999999999
Q ss_pred HHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhh-cccC
Q 015249 165 LMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN-LKVG 243 (410)
Q Consensus 165 i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~-~~~g 243 (410)
|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++++ +++|
T Consensus 244 i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G 323 (487)
T 2w8n_A 244 LLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVG 323 (487)
T ss_dssp HHHHHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBS
T ss_pred HHHHHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCc-eecceEeccCCCCCcccccceecceeeeeecC
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT-FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~-~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
+|.++++++||++++.+++++.+++++++++|+++++||... ..|+ |++|||+.+++++|++++||+||||++|++|+
T Consensus 324 ~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 402 (487)
T 2w8n_A 324 NGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFD 402 (487)
T ss_dssp CTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEES
T ss_pred CcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEEEEeC
Confidence 999999999999999999999999999999999999999764 2578 99999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
|.||||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|++.|+|
T Consensus 403 ~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v 482 (487)
T 2w8n_A 403 TEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYV 482 (487)
T ss_dssp CHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTTGGGGGEEEEEE
T ss_pred CHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHHHHHHhcCccEE
Confidence 99999999999999999999999999999999999999999999887777899999999999999999999999999999
Q ss_pred EEe
Q 015249 403 CLG 405 (410)
Q Consensus 403 ~~~ 405 (410)
+++
T Consensus 483 ~~~ 485 (487)
T 2w8n_A 483 CYG 485 (487)
T ss_dssp EEC
T ss_pred EEe
Confidence 875
No 27
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=1.3e-87 Score=682.11 Aligned_cols=390 Identities=38% Similarity=0.639 Sum_probs=370.2
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
.++++++++++++|+|||+.+++.|+..+++.++|++...+++.++..+. ++...++.++|+|||++|+|||||+...
T Consensus 70 ~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 147 (486)
T 3pqa_A 70 KEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPS--DDRLIFTRREPVGIVGAITPFNFPLNLS 147 (486)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC--TTEEEEEEEEECSEEEEEECSSSHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecC--CCceeEEEEccccEEEEECCCchHHHHH
Confidence 44566779999999999999999999999999999999998876654432 2567889999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~a----glP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
++++++||++||+||+|||+.+|.++..+.+++.++ |+|+|++|+++|++.+.+..|+.||+||.|+||||+.+|+
T Consensus 148 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~ 227 (486)
T 3pqa_A 148 AHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGE 227 (486)
T ss_dssp HHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHH
Confidence 999999999999999999999999999999999999 9999999999998778899999999999999999999999
Q ss_pred HHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 164 KLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 164 ~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 228 ~i~~~aa--~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 305 (486)
T 3pqa_A 228 LITKKAG--FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVG 305 (486)
T ss_dssp HHHHHCC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBS
T ss_pred HHHHHcC--CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccC
Confidence 9999887 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+|.++++++||++++.+++++.+++++++.+|+++++||... |+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 306 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~---g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~ 381 (486)
T 3pqa_A 306 NPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRD---KALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE 381 (486)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEE---TTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH
T ss_pred CCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCCC---CcEeccEEE-eCCCCChhhcccccccEEEEEEEcH
Confidence 999999999999999999999999999999999999999753 799999999 9999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
||||+++|+++|||+++|||+|.++++++++++++|+|+||+++. ..+.+||||+|+||+|+++|.+|+++|++.|+|
T Consensus 382 -deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v 460 (486)
T 3pqa_A 382 -EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTI 460 (486)
T ss_dssp -HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEE
T ss_pred -HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEE
Confidence 999999999999999999999999999999999999999999875 345899999999999999999999999999999
Q ss_pred EEec
Q 015249 403 CLGD 406 (410)
Q Consensus 403 ~~~~ 406 (410)
+++.
T Consensus 461 ~~~~ 464 (486)
T 3pqa_A 461 IISK 464 (486)
T ss_dssp EEEC
T ss_pred EEcC
Confidence 8863
No 28
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=3.4e-87 Score=682.03 Aligned_cols=398 Identities=36% Similarity=0.579 Sum_probs=377.4
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHH-HHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLR-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~-ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
++++.++++++++|+||++.+++. |+..+++.++|++....++.++..+. ..+...++.++|+|||++|+|||||+..
T Consensus 80 ~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~pwN~P~~~ 158 (490)
T 2ve5_A 80 RERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQI 158 (490)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEE-ETTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeeEeeccccEEEEECCCcchHHH
Confidence 445677899999999999999997 99999999999999987765554332 2466788999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|+
T Consensus 159 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~ 238 (490)
T 2ve5_A 159 ALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVM 238 (490)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997788999999999999999999999999999
Q ss_pred HHh-ccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCC
Q 015249 167 AGA-AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 167 ~~~-~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~ 245 (410)
+.+ +++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 239 ~~a~a~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 318 (490)
T 2ve5_A 239 ASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDP 318 (490)
T ss_dssp HHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HhchhccccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 999 8899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceecceEeccCCCCCcccccceecceeeeeec
Q 015249 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 321 (410)
Q Consensus 246 ~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~----~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~ 321 (410)
.++++++||++++.+++++.+++++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|
T Consensus 319 ~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~ 398 (490)
T 2ve5_A 319 QDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVY 398 (490)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEEe
Confidence 99999999999999999999999999999999999997631 25899999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 015249 322 KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 401 (410)
Q Consensus 322 ~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~ 401 (410)
+|.||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+++++|++.|+
T Consensus 399 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~pfGG~k~SG~G~~~G~~~~~~f~~~k~ 478 (490)
T 2ve5_A 399 DDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKS 478 (490)
T ss_dssp SCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEE
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCCCCCCCCcchHHHHHHhheeEE
Confidence 99999999999999999999999999999999999999999999988778899999999999999999999999999999
Q ss_pred EEEec
Q 015249 402 VCLGD 406 (410)
Q Consensus 402 v~~~~ 406 (410)
|+++.
T Consensus 479 v~~~~ 483 (490)
T 2ve5_A 479 VQVEL 483 (490)
T ss_dssp EEEEC
T ss_pred EEEcc
Confidence 98863
No 29
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=9.1e-87 Score=681.61 Aligned_cols=396 Identities=31% Similarity=0.476 Sum_probs=370.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc-CCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIP-ATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
++++.++++++.+|+|||+.+++.|+..+++.++|++...+++.+...+ ...++...++.++|+|||++|+|||||+..
T Consensus 110 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 189 (516)
T 1uzb_A 110 RRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAI 189 (516)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHH
Confidence 3456677999999999999999999999999999999998887765432 222456678999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|+++..|.+++.++|+|+|++|+++|.+.+.+..|+.||+|+.|+||||+.+|+.|+
T Consensus 190 ~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~ 269 (516)
T 1uzb_A 190 FTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIY 269 (516)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997778899999999999999999999999999
Q ss_pred HHhc------cccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhc
Q 015249 167 AGAA------GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNL 240 (410)
Q Consensus 167 ~~~~------~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~ 240 (410)
+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++
T Consensus 270 ~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 349 (516)
T 1uzb_A 270 EAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERL 349 (516)
T ss_dssp HHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTC
T ss_pred HHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhc
Confidence 9988 7899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeee
Q 015249 241 KVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 320 (410)
Q Consensus 241 ~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~ 320 (410)
++|+| ++++++||++++.+++++.+++++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++
T Consensus 350 ~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~ 427 (516)
T 1uzb_A 350 SVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIR 427 (516)
T ss_dssp CBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEE
T ss_pred cCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEE
Confidence 99999 99999999999999999999999999998 89999975323579999999999999999999999999999999
Q ss_pred cCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCCCCCCCCC-CChHHHHHhhh
Q 015249 321 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGR-EGSKYGMDEFL 397 (410)
Q Consensus 321 ~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~--~~~~~pfGg~~~SG~g~-~~g~~~l~~~~ 397 (410)
|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+.+. ..+.+||||+|.||+|+ ++|.+++++|+
T Consensus 428 ~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~ 507 (516)
T 1uzb_A 428 VKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFL 507 (516)
T ss_dssp ESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTE
T ss_pred eCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcC
Confidence 9999999999999999999999999999999999999999999998654 35789999999999995 79999999999
Q ss_pred eeeEEEEe
Q 015249 398 EIKYVCLG 405 (410)
Q Consensus 398 ~~k~v~~~ 405 (410)
+.|+|+++
T Consensus 508 ~~k~v~~~ 515 (516)
T 1uzb_A 508 EMKAVAER 515 (516)
T ss_dssp EEEEEEEE
T ss_pred CeeEEEec
Confidence 99999874
No 30
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=3.7e-87 Score=682.07 Aligned_cols=397 Identities=28% Similarity=0.452 Sum_probs=369.9
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++.+|+|||+.+++.|+..+++.++|++...+++.++..+...++...++.++|+|||++|+|||||+...
T Consensus 95 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 174 (500)
T 2j6l_A 95 REKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVY 174 (500)
T ss_dssp HHTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHH
Confidence 34556679999999999999999999999999999999887665554333223455678899999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELAL----QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~----~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
++++++||++||+||+|||+.+|.++..+.+++. ++|+|+|++|+++| +.+.+..|+.||+||+|+||||+.+|+
T Consensus 175 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~ 253 (500)
T 2j6l_A 175 GWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGK 253 (500)
T ss_dssp HHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHH
T ss_pred HHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHH
Confidence 9999999999999999999999999998888765 56999999999999 778899999999999999999999999
Q ss_pred HHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 164 KLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 164 ~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 254 ~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 333 (500)
T 2j6l_A 254 QVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVG 333 (500)
T ss_dssp HHHHHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBS
T ss_pred HHHHHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+|.++++++||++++.+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 334 ~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 413 (500)
T 2j6l_A 334 NPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQN 413 (500)
T ss_dssp CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECC
T ss_pred CcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCC
Confidence 99999999999999999999999999999999999999976323579999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHH--hhcceeEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheee
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVS--EALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIK 400 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~--~~~~~g~v~iN~~~~-~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k 400 (410)
+||||+++|+++|||+++|||+|.+++++++ +++++|+|+||+.+. ..+.+||||+|.||+|+++|.+|+++|++.|
T Consensus 414 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k 493 (500)
T 2j6l_A 414 EEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRS 493 (500)
T ss_dssp HHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGGGGGEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHHHHhhceE
Confidence 9999999999999999999999999999999 779999999998765 3578999999999999999999999999999
Q ss_pred EEEEe
Q 015249 401 YVCLG 405 (410)
Q Consensus 401 ~v~~~ 405 (410)
+|+++
T Consensus 494 ~v~~~ 498 (500)
T 2j6l_A 494 TCTIN 498 (500)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99875
No 31
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=5.6e-87 Score=677.59 Aligned_cols=392 Identities=33% Similarity=0.551 Sum_probs=369.5
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCC----cce-eEEeeeceEEEEEcCCCc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPD----RRL-FVLKQPVGVAGAITPWNF 82 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~Gvv~~i~p~n~ 82 (410)
++++.++++++.+|+||++.+++.|+..+++.++|++...+++.++..+...++ ... ++.++|+|||++|+||||
T Consensus 76 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~ 155 (475)
T 1euh_A 76 MRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNY 155 (475)
T ss_dssp HHTHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTS
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCc
Confidence 345567799999999999999999999999999999998877665543322234 456 899999999999999999
Q ss_pred chhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHH
Q 015249 83 PLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 162 (410)
Q Consensus 83 p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~ 162 (410)
|+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.+..|+.||+++.|+||||+.+|
T Consensus 156 P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g 235 (475)
T 1euh_A 156 PVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIG 235 (475)
T ss_dssp TTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHH
T ss_pred hHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHH
Confidence 99999999999999999999999999999999999999999999999999999767789999999999999999999999
Q ss_pred HHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhccc
Q 015249 163 KKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 242 (410)
Q Consensus 163 ~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~ 242 (410)
+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++
T Consensus 236 ~~i~~~aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 313 (475)
T 1euh_A 236 ERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTI 313 (475)
T ss_dssp HHHHHHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCB
T ss_pred HHHHHhcC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccC
Confidence 99999887 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 243 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 243 g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
|+|.+ ++++||++++.+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 314 g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~ 389 (475)
T 1euh_A 314 GNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVT 389 (475)
T ss_dssp SCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecC
Confidence 99999 999999999999999999999999999999999975 37999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECC-CCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE-GLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 401 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~-~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~ 401 (410)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+ +....+.+||||+|+||+|+++|.+|+++|++.|+
T Consensus 390 ~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~ 469 (475)
T 1euh_A 390 SVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKS 469 (475)
T ss_dssp CHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEE
T ss_pred CHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccHHHHHHhCCeeE
Confidence 99999999999999999999999999999999999999999999 66667899999999999999999999999999999
Q ss_pred EEEe
Q 015249 402 VCLG 405 (410)
Q Consensus 402 v~~~ 405 (410)
|+++
T Consensus 470 v~~~ 473 (475)
T 1euh_A 470 VVFD 473 (475)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9875
No 32
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=5e-87 Score=680.02 Aligned_cols=397 Identities=31% Similarity=0.542 Sum_probs=353.8
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC-CCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPAT-LPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
++++.++++++++|+||++.+++.|+..+++.++|++...+++.++..+.. .++...++.++|+|||++|+|||||+..
T Consensus 80 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 159 (485)
T 4dng_A 80 HENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNL 159 (485)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHH
Confidence 345667799999999999999999999999999999999887666544432 3457789999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTA-LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 165 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~-~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i 165 (410)
.++++++||++||+||+|||+.+|.++ ..|.+++.++|+|+|++|+++|++.+.+..|+.||+++.|+||||+.+|+.|
T Consensus 160 ~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i 239 (485)
T 4dng_A 160 SMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHI 239 (485)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHH
Confidence 999999999999999999999999999 9999999999999999999999877799999999999999999999999999
Q ss_pred HHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCC
Q 015249 166 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 245 (410)
Q Consensus 166 ~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~ 245 (410)
.+.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 240 ~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~ 319 (485)
T 4dng_A 240 GEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQ 319 (485)
T ss_dssp HHHHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCT
T ss_pred HHHHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHH
Q 015249 246 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325 (410)
Q Consensus 246 ~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 325 (410)
.++++++||++++.+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 320 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~ 396 (485)
T 4dng_A 320 TDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQ 396 (485)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHH
T ss_pred CcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHH
Confidence 999999999999999999999999999999999999976 37999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 015249 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 404 (410)
Q Consensus 326 eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~ 404 (410)
|||+++|+++|||+++|||+|.++++++++++++|+|+||+++.. .+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 397 eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~ 476 (485)
T 4dng_A 397 EAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISI 476 (485)
T ss_dssp HHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----------------------CHHHHHHHEEEEEEEE
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEE
Confidence 999999999999999999999999999999999999999998753 7889999999999999999999999999999998
Q ss_pred ecc
Q 015249 405 GDM 407 (410)
Q Consensus 405 ~~~ 407 (410)
+..
T Consensus 477 ~~~ 479 (485)
T 4dng_A 477 QKQ 479 (485)
T ss_dssp EC-
T ss_pred ecC
Confidence 753
No 33
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=3.1e-87 Score=682.29 Aligned_cols=392 Identities=32% Similarity=0.511 Sum_probs=370.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC--CC--CcceeEEeeeceEEEEEcCCCcc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPAT--LP--DRRLFVLKQPVGVAGAITPWNFP 83 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~P~Gvv~~i~p~n~p 83 (410)
++++.++++++.+|+|||+.+++.|+..+++.++|++...+++.++..+.. .. +...++.++|+|||++|+|||||
T Consensus 91 ~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 170 (501)
T 1uxt_A 91 ERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYP 170 (501)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTST
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccH
Confidence 345667799999999999999999999999999999998887766543321 12 33678999999999999999999
Q ss_pred hhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 84 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 84 ~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++ +.+..|+.||+||.|+||||+.+|+
T Consensus 171 ~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~ 249 (501)
T 1uxt_A 171 LFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGE 249 (501)
T ss_dssp THHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHH
Confidence 999999999999999999999999999999999999999999999999999976 8899999999999999999999999
Q ss_pred HHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 164 KLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 164 ~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 250 ~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 327 (501)
T 1uxt_A 250 RVVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVG 327 (501)
T ss_dssp HHHHHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBS
T ss_pred HHHHhcC--CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCC
Confidence 9999887 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCC-ceecceEeccCC---CCCcccccceecceeeee
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM-TFYEPTVLSNVK---SEMLVSREEVFGPVAPLL 319 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~-~~~~Ptv~~~~~---~~~~~~~eE~fgPvl~v~ 319 (410)
+|.++++++||++++.+++++.+++++++++|+++++||.. .| +|++|||+.+++ ++|++++||+||||++|+
T Consensus 328 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~ 404 (501)
T 1uxt_A 328 DPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAV 404 (501)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEE
T ss_pred CccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEE
Confidence 99999999999999999999999999999999999999975 36 899999999999 999999999999999999
Q ss_pred ecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCC-CCCCCCCCccCCCCCCCCCCChHHHHHhhhe
Q 015249 320 CFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG-LISTEVAPFGGVKQSGLGREGSKYGMDEFLE 398 (410)
Q Consensus 320 ~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~-~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~ 398 (410)
+|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++ ....+.+||||+|+||+|+++|.+++++|++
T Consensus 405 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~ 484 (501)
T 1uxt_A 405 EVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTA 484 (501)
T ss_dssp EESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEE
T ss_pred eeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHHHHHHhCc
Confidence 999999999999999999999999999999999999999999999998 5567899999999999999999999999999
Q ss_pred eeEEEEe
Q 015249 399 IKYVCLG 405 (410)
Q Consensus 399 ~k~v~~~ 405 (410)
.|+|+++
T Consensus 485 ~k~v~~~ 491 (501)
T 1uxt_A 485 YKTIVFN 491 (501)
T ss_dssp EEEEEEE
T ss_pred eeEEEEe
Confidence 9999885
No 34
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=7.1e-87 Score=681.22 Aligned_cols=396 Identities=34% Similarity=0.572 Sum_probs=358.4
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC-CCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPAT-LPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
++++.++++++++|+||++.+++.|+..+++.++|++...++..+ ..+.. .++...++.++|+|||++|+|||||+..
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 164 (508)
T 3r64_A 86 EEHREEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNL 164 (508)
T ss_dssp HHTHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHH
Confidence 345677799999999999999999999999999999998876555 33322 3457789999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTA-LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 165 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~-~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i 165 (410)
.++++++||++||+||+|||+.+|.++ ..+.+++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|
T Consensus 165 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i 244 (508)
T 3r64_A 165 SIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRV 244 (508)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHH
Confidence 999999999999999999999999999 9999999999999999999999778899999999999999999999999999
Q ss_pred HHHhcc--ccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 166 MAGAAG--TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 166 ~~~~~~--~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|
T Consensus 245 ~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 324 (508)
T 3r64_A 245 GELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTG 324 (508)
T ss_dssp HHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBS
T ss_pred HHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCC
Confidence 999988 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+|.++++++||++++.+++++.+++++++++|+++++||.. .++|++|||+.+++++|++++||+||||++|++|+|
T Consensus 325 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 401 (508)
T 3r64_A 325 DPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADD 401 (508)
T ss_dssp CTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESS
T ss_pred CCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeCC
Confidence 99999999999999999999999999999999999999976 379999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
+||||+++|+++|||+++|||+|.++++++++++++|+|+||+++.. .+.+||||+|.||+|+++|++++++|++.|+|
T Consensus 402 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v 481 (508)
T 3r64_A 402 EAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWI 481 (508)
T ss_dssp HHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC--------------------CCCHHHHHHHTEEEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceEEE
Confidence 99999999999999999999999999999999999999999998754 68899999999999999999999999999999
Q ss_pred EEecc
Q 015249 403 CLGDM 407 (410)
Q Consensus 403 ~~~~~ 407 (410)
+++..
T Consensus 482 ~~~~~ 486 (508)
T 3r64_A 482 GIKRS 486 (508)
T ss_dssp EEECC
T ss_pred EEecc
Confidence 98753
No 35
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=3.9e-86 Score=672.78 Aligned_cols=397 Identities=29% Similarity=0.483 Sum_probs=371.2
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
+++++++++++.+|+||++.+++.|+..+++.++|++.+.+...++..+...++...++.++|+|||++|+|||||+...
T Consensus 79 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 158 (486)
T 1t90_A 79 SQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVP 158 (486)
T ss_dssp HTTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHH
Confidence 34566779999999999999999999999999999998877766654321223556788999999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++| +.+.+..|+.||+|+.|+||||+.+|+.|++
T Consensus 159 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~ 237 (486)
T 1t90_A 159 CWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYK 237 (486)
T ss_dssp HHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998 4678999999999999999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCe-EEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANR-VLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~-v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ +|+|+++|+++++++++|+|.
T Consensus 238 ~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~ 316 (486)
T 1t90_A 238 KGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGL 316 (486)
T ss_dssp HHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTT
T ss_pred HHhccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCC
Confidence 999999999999999999999999999999999999999999999999999 999999 999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceecceEeccCCCCCcccccceecceeeeeecCCHH
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 325 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~-~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 325 (410)
++++++||++++.+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 317 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~ 396 (486)
T 1t90_A 317 DDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLK 396 (486)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHH
T ss_pred ccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHH
Confidence 9999999999999999999999999999999999997432 357999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCCCCCCCC--CCChHHHHHhhheeeEE
Q 015249 326 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG--REGSKYGMDEFLEIKYV 402 (410)
Q Consensus 326 eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGg~~~SG~g--~~~g~~~l~~~~~~k~v 402 (410)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++... .+.+||||+|.||+| +++|.+|+++|++.|+|
T Consensus 397 eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v 476 (486)
T 1t90_A 397 EAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVV 476 (486)
T ss_dssp HHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEE
T ss_pred HHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEE
Confidence 999999999999999999999999999999999999999986543 578999999999999 89999999999999999
Q ss_pred EEec
Q 015249 403 CLGD 406 (410)
Q Consensus 403 ~~~~ 406 (410)
+++.
T Consensus 477 ~~~~ 480 (486)
T 1t90_A 477 TARY 480 (486)
T ss_dssp EEEC
T ss_pred EEec
Confidence 8863
No 36
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=4.1e-86 Score=672.14 Aligned_cols=390 Identities=36% Similarity=0.602 Sum_probs=346.7
Q ss_pred HHHHHHHHHHHHHHhhchHHHH-HHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLL-LREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a-~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
++++.++++++.+|+||++.++ +.|+..+++.++|++....++.+.. .....++.++|+|||++|+|||||+..
T Consensus 81 ~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~-----~~~~~~~~~~P~GVv~~I~PwN~P~~~ 155 (478)
T 3ty7_A 81 ENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEE-----RRGDDLVVKEAIGVSGLITPWNFPTNQ 155 (478)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEE-----EETTEEEEEEECCCEEEECCSSSTTHH
T ss_pred HHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhccc-----CCccceEEecCceEEEEECCCcchHHH
Confidence 3455677999999999999999 7899999999999999887765532 134678899999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|.
T Consensus 156 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~ 235 (478)
T 3ty7_A 156 TSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIM 235 (478)
T ss_dssp HHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--
T ss_pred HHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998788999999999999999999999999999
Q ss_pred HHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCC
Q 015249 167 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 246 (410)
Q Consensus 167 ~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~ 246 (410)
+.++++.+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.
T Consensus 236 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 315 (478)
T 3ty7_A 236 EKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPR 315 (478)
T ss_dssp CSTTTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTT
T ss_pred HHHHhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC---CCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 247 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 247 ~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~---~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
++++++||++++++++++.+++++++++|+++++||.... ..|+|++|||+.++++++++++||+||||++|++|+|
T Consensus 316 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~ 395 (478)
T 3ty7_A 316 EDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYND 395 (478)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCC
Confidence 9999999999999999999999999999999999994321 3589999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
.||||+++|+++|||+++|||+|.+.++++++++++|+|+||+ ....+.+||||+|.||+|+++|++|+++||+.|+|+
T Consensus 396 ~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~ 474 (478)
T 3ty7_A 396 LDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474 (478)
T ss_dssp HHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC----------------------CCGGGEEEEEEE
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEE
Confidence 9999999999999999999999999999999999999999999 555678999999999999999999999999999986
No 37
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=1.7e-84 Score=667.90 Aligned_cols=396 Identities=24% Similarity=0.356 Sum_probs=367.9
Q ss_pred HHHHHHHHHHHhhchHHHHHHH-HHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhhhh
Q 015249 11 KMLYLRLLMRLILGASSLLLRE-VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 89 (410)
Q Consensus 11 ~~~~~~~~~~e~g~~~~~a~~e-i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~~ 89 (410)
+.+++.++++|+||++.+++.| +..+++.++|++....++.+........+...+.++.|+|||++|+|||||+....+
T Consensus 140 ~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~ 219 (563)
T 4e3x_A 140 RAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNL 219 (563)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHHHH
Confidence 5677889999999999999987 999999999999999888775432222334456778888999999999999999999
Q ss_pred hccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHHHh
Q 015249 90 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 169 (410)
Q Consensus 90 ~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~ 169 (410)
++++|| +||+||+|||+.+|.++..++++|.++|+|+|++|+++|++.+.+..|+.||+|+.|.||||+.+|+.|.+.+
T Consensus 220 ~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~a 298 (563)
T 4e3x_A 220 AGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQV 298 (563)
T ss_dssp HHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHH
Confidence 999999 5999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred ccccc------eeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 170 AGTVK------KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 170 ~~~~~------~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
+++++ |+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 299 a~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~vG 378 (563)
T 4e3x_A 299 AQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVG 378 (563)
T ss_dssp HHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCBS
T ss_pred HhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccCC
Confidence 98887 599999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCccccccCCHHHHHHHHHHHHHHHH-CCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeec
Q 015249 244 DG-FGEGVVQGPLINKAALEKVETFVEDAVS-KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 321 (410)
Q Consensus 244 ~~-~~~~~~~gp~~~~~~~~~~~~~i~~~~~-~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~ 321 (410)
+| .|+++++||++++.+++++.++|+++++ +|+++++||..+...|+|++|||+.+++++|++++||+||||++|++|
T Consensus 379 dp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~ 458 (563)
T 4e3x_A 379 DPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVY 458 (563)
T ss_dssp CTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEE
T ss_pred CcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEE
Confidence 99 9999999999999999999999999996 899999999865446899999999999999999999999999999999
Q ss_pred CC--HHHHHHHh-hcCCCCcEEEEecCCHHHHHHHHhhcc--eeEEEECCCCC--CCCCCCccCCCCCCCC-CCChHHHH
Q 015249 322 KT--EEEAIHMA-NDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLI--STEVAPFGGVKQSGLG-REGSKYGM 393 (410)
Q Consensus 322 ~~--~~eai~~~-n~~~~gl~~sv~s~d~~~~~~~~~~~~--~g~v~iN~~~~--~~~~~pfGg~~~SG~g-~~~g~~~l 393 (410)
+| +||||+++ |+++|||+++|||+|.+.+++++++++ +|+|+||+.+. ..+.+||||+|.||+| +.+|+++|
T Consensus 459 ~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~l 538 (563)
T 4e3x_A 459 PDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHYI 538 (563)
T ss_dssp CGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTGG
T ss_pred CCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHHHH
Confidence 97 69999999 789999999999999999999999976 99999999764 3578999999999998 78999999
Q ss_pred HhhheeeEEEEecc
Q 015249 394 DEFLEIKYVCLGDM 407 (410)
Q Consensus 394 ~~~~~~k~v~~~~~ 407 (410)
++|++.|+|..+-+
T Consensus 539 ~~~~~~k~v~~~~~ 552 (563)
T 4e3x_A 539 LRWTSPQVIKETHK 552 (563)
T ss_dssp GGGBCCEEEEEECS
T ss_pred HHhCceEEEEEeCc
Confidence 99999999987643
No 38
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=2.9e-84 Score=655.36 Aligned_cols=389 Identities=29% Similarity=0.467 Sum_probs=358.1
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccc---CCCCCcceeEEeeeceEEEEEcCCCcc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEIIP---ATLPDRRLFVLKQPVGVAGAITPWNFP 83 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~P~Gvv~~i~p~n~p 83 (410)
+++++++++++.+|+||++.+++ .|+..++..++|++.....+...... ....+...++.++|+|||++|+|||||
T Consensus 54 ~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 133 (469)
T 3sza_A 54 QEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYP 133 (469)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSST
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcch
Confidence 44566779999999999999998 59999999998887766554332111 111245678999999999999999999
Q ss_pred hhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 84 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 84 ~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|+ .+.+..|+.| ++|.|+||||+.+|+
T Consensus 134 ~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g~-~~~~~~ll~~-~vd~I~FTGS~~vG~ 210 (469)
T 3sza_A 134 FNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVINGG-VPETTELLKE-RFDHILYTGSTGVGK 210 (469)
T ss_dssp THHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH-SCTTTSCBCCCS-HHHHHHHTTS-CCSEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCcceEEEEECC-HHHHHHHHhc-CCCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999 999999999984 4556678877 899999999999999
Q ss_pred HHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 164 KLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 164 ~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++ +|
T Consensus 211 ~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g 289 (469)
T 3sza_A 211 IIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YG 289 (469)
T ss_dssp HHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HC
T ss_pred HHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998 69
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+|.++++++||++++.+++++.+++ +|+++++||..+ .+|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 290 ~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 363 (469)
T 3sza_A 290 EDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGTGD-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRS 363 (469)
T ss_dssp SCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCCEE-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSS
T ss_pred CCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCccC-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCC
Confidence 9999999999999999999999998 599999999865 4689999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 015249 324 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 401 (410)
Q Consensus 324 ~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~--~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~ 401 (410)
+||||+++|+++|||+++|||+|.++++++++++++|+|+||+... ..+.+||||+|+||+|+++|.+|+++||+.|+
T Consensus 364 ~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~ 443 (469)
T 3sza_A 364 LEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRS 443 (469)
T ss_dssp HHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEE
T ss_pred HHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeE
Confidence 9999999999999999999999999999999999999999999863 46889999999999999999999999999999
Q ss_pred EEEec
Q 015249 402 VCLGD 406 (410)
Q Consensus 402 v~~~~ 406 (410)
|+++.
T Consensus 444 v~~~~ 448 (469)
T 3sza_A 444 CLVRP 448 (469)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99874
No 39
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=5.3e-84 Score=655.61 Aligned_cols=394 Identities=29% Similarity=0.428 Sum_probs=367.0
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-ccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEI-IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++++++++++|+||+. ++..|+..+++.+++++..+.+..... .....++...+..++|+|||++|+|||||+...
T Consensus 65 ~~~~ela~~~~~e~Gk~~-~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~ 143 (474)
T 4h7n_A 65 SRREQLTEALVNDTGRLS-ITVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLS 143 (474)
T ss_dssp TTHHHHHHHHHHHHSCSH-HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHH
T ss_pred HHHHHHHHHHHHHcCCcH-HHHHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHH
Confidence 345667999999999974 566799999999999998887765432 222335566778899999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++++++| +.+.+..|+.| ++.|+||||+.+|+.|++
T Consensus 144 ~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~ 220 (474)
T 4h7n_A 144 MIDTIPALLAGCAVVVKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAE 220 (474)
T ss_dssp HTTHHHHHHHTCEEEEEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHH
T ss_pred hcccCcchhcCCceeecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhh
Confidence 999999999999999999999999999999999999999999999998 56788888875 899999999999999999
Q ss_pred HhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCC
Q 015249 168 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 247 (410)
Q Consensus 168 ~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~ 247 (410)
.++++++|+++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.+
T Consensus 221 ~aa~~~~~v~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 300 (474)
T 4h7n_A 221 TAARRFIPAYLELGGKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLV 300 (474)
T ss_dssp HHHHHTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSG
T ss_pred hhhcccccccccCCCcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceecceEeccCCCCCcccccceecceeeeeecCCHHH
Q 015249 248 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 326 (410)
Q Consensus 248 ~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~-~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 326 (410)
+++++||++++.+++++.+++++++++|+++++||...+ .+|+|++|||+.+++++|++++||+||||++|++|+|.||
T Consensus 301 ~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~de 380 (474)
T 4h7n_A 301 EDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEE 380 (474)
T ss_dssp GGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHH
T ss_pred cccccCccccHHHHHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHH
Confidence 999999999999999999999999999999999998654 5689999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCCCCCCCC-CCChHHHHHhhheeeEEE
Q 015249 327 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 327 ai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~--~~~~~pfGg~~~SG~g-~~~g~~~l~~~~~~k~v~ 403 (410)
||+++|+++|||+++|||+|.++++++++++++|+|+||+.+. ..+..||||+|.||+| +++|.+|+++|++.|+|+
T Consensus 381 Ai~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~ 460 (474)
T 4h7n_A 381 AVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFL 460 (474)
T ss_dssp HHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEE
T ss_pred HHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEE
Confidence 9999999999999999999999999999999999999998765 3578999999999998 789999999999999999
Q ss_pred Eec
Q 015249 404 LGD 406 (410)
Q Consensus 404 ~~~ 406 (410)
++.
T Consensus 461 ~~~ 463 (474)
T 4h7n_A 461 IKT 463 (474)
T ss_dssp EEC
T ss_pred ECC
Confidence 874
No 40
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=7.8e-83 Score=689.17 Aligned_cols=397 Identities=30% Similarity=0.450 Sum_probs=374.3
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhhh
Q 015249 9 KQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 88 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~~ 88 (410)
+++.+++.++++|+||++.+++.|+..++++++||+..++++.+...+...++..+++.++|+|||++|+|||||+...+
T Consensus 605 ~~~~eLa~~~~~E~GK~~~ea~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~ 684 (1026)
T 4f9i_A 605 KRLFELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISM 684 (1026)
T ss_dssp HTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHH
Confidence 45667799999999999999999999999999999999988766544332357778899999999999999999999999
Q ss_pred hhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHHH
Q 015249 89 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 168 (410)
Q Consensus 89 ~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~ 168 (410)
+++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.+..|+.||+|+.|+||||+.+|+.|.+.
T Consensus 685 ~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~ 764 (1026)
T 4f9i_A 685 GMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIER 764 (1026)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred hc------cccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhccc
Q 015249 169 AA------GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 242 (410)
Q Consensus 169 ~~------~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~ 242 (410)
++ ++.+|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++++|||++++|+|+++|+++++++++
T Consensus 765 aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~v 844 (1026)
T 4f9i_A 765 AAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKV 844 (1026)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCB
T ss_pred hhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhccc
Confidence 87 467999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecC
Q 015249 243 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 322 (410)
Q Consensus 243 g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 322 (410)
|+|.++++++||++++.+++++.++|++++.+| ++++||..+...|+|++|||+.++++++++++||+||||++|++|+
T Consensus 845 G~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 923 (1026)
T 4f9i_A 845 GPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAK 923 (1026)
T ss_dssp CCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeC
Confidence 999999999999999999999999999999998 9999997653348999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC--CCCCCccCCCCCCCCC-CChHHHHHhhhee
Q 015249 323 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLGR-EGSKYGMDEFLEI 399 (410)
Q Consensus 323 ~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~--~~~~pfGg~~~SG~g~-~~g~~~l~~~~~~ 399 (410)
|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.+.. .+.+||||+|.||+|+ .+|+++|++|++.
T Consensus 924 d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~ 1003 (1026)
T 4f9i_A 924 DFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDP 1003 (1026)
T ss_dssp SHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEE
T ss_pred CHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceE
Confidence 999999999999999999999999999999999999999999998653 4789999999999995 5999999999999
Q ss_pred eEEEEec
Q 015249 400 KYVCLGD 406 (410)
Q Consensus 400 k~v~~~~ 406 (410)
|+|+++.
T Consensus 1004 k~v~~~~ 1010 (1026)
T 4f9i_A 1004 RVVTENT 1010 (1026)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 9998864
No 41
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=8.9e-83 Score=643.83 Aligned_cols=386 Identities=27% Similarity=0.414 Sum_probs=357.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHhCcc-cc--CCCCCcceeEEeeeceEEEEEcCCCcc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLL-REVDYGAKFIEFYAEEAKRVYGEI-IP--ATLPDRRLFVLKQPVGVAGAITPWNFP 83 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~-~ei~~a~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~P~Gvv~~i~p~n~p 83 (410)
.++++++++++.+|+||++.+++ .|+..+++.++|++.....+.... .+ ....+...++.++|+|||++|+|||||
T Consensus 64 ~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 143 (457)
T 3lns_A 64 INNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYP 143 (457)
T ss_dssp HTTHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSST
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcch
Confidence 34556779999999999999999 599999999999998887765422 11 111345688999999999999999999
Q ss_pred hhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHH
Q 015249 84 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 163 (410)
Q Consensus 84 ~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 163 (410)
+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++| +.+.+..|+. ++||.|+||||+.+|+
T Consensus 144 ~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~ 220 (457)
T 3lns_A 144 VNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGK 220 (457)
T ss_dssp THHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999 99999999999 6778899998 7899999999999999
Q ss_pred HHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 164 KLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 164 ~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
.|.+.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 221 ~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~-- 298 (457)
T 3lns_A 221 VVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL-- 298 (457)
T ss_dssp HHHHHHHTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHhhccCceEEECCCCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
|.++ ++||++++++++++.++++++ ++++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 299 -p~~~--~~gpli~~~~~~rv~~~i~~a---~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 371 (457)
T 3lns_A 299 -PEIN--STGKLVTERQVQRLVSLLEAT---QGQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDS 371 (457)
T ss_dssp -CSTT--TTCCCSSHHHHHHHHHHHHHC---CSEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESC
T ss_pred -CCcc--cccCCCCHHHHHHHHHHHHhc---CCeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCC
Confidence 6666 899999999999999999985 36999999754 3579999999999999999999999999999999999
Q ss_pred HHHHHHHhhc-CCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCCCCCCCCCCChHHHHHhhheee
Q 015249 324 EEEAIHMAND-TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIK 400 (410)
Q Consensus 324 ~~eai~~~n~-~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~--~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k 400 (410)
+||||+++|+ ++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|
T Consensus 372 ~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k 451 (457)
T 3lns_A 372 VRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKK 451 (457)
T ss_dssp HHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEE
T ss_pred HHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCee
Confidence 9999999999 999999999999999999999999999999999864 4788999999999999999999999999999
Q ss_pred EEEEe
Q 015249 401 YVCLG 405 (410)
Q Consensus 401 ~v~~~ 405 (410)
+|++.
T Consensus 452 ~v~~~ 456 (457)
T 3lns_A 452 SVRIV 456 (457)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99863
No 42
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.9e-82 Score=646.32 Aligned_cols=390 Identities=29% Similarity=0.404 Sum_probs=364.6
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 87 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~~ 87 (410)
++++.++++++++|+||++.+++.|+..+++.++|++...+...+...+.. .+...++.++|+|||++|+|||||+...
T Consensus 78 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 156 (490)
T 3ju8_A 78 KSRADELARVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSGPL-ADATAVLRHKPHGVVAVFGPYNFPGHLP 156 (490)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCEEEEE-TTEEEEEEEEECSEEEEECCSSSTTHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC-CCCeeeEEECCCCEEEEECCCcchHHHH
Confidence 345667799999999999999999999999999999998877766543211 2445677899999999999999999999
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 167 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~ 167 (410)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++| +.+.+..|+.||+|+.|+||||+.+|+.|++
T Consensus 157 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~ 235 (490)
T 3ju8_A 157 NGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHS 235 (490)
T ss_dssp HHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 5788999999999999999999999999999
Q ss_pred Hhcccccee-eeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecch-HHHHHHHHHHHHhhcccCC-
Q 015249 168 GAAGTVKKV-SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI-YEKFADAFSKAVKNLKVGD- 244 (410)
Q Consensus 168 ~~~~~~~~~-~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~-~~~f~~~L~~~~~~~~~g~- 244 (410)
.++++++|+ ++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|+++++++++|+
T Consensus 236 ~aa~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~ 315 (490)
T 3ju8_A 236 QFGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRF 315 (490)
T ss_dssp HTTTCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCT
T ss_pred HhhccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCC
Confidence 999999998 8999999999999999999999999999999999999999999999996 9999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCH
Q 015249 245 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 324 (410)
Q Consensus 245 ~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~ 324 (410)
|.++++++||++++.+++++.+++++++++|+++++||...+.+|+|++|||+. +++++++++||+||||++|++|+|+
T Consensus 316 ~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~ 394 (490)
T 3ju8_A 316 DEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDF 394 (490)
T ss_dssp TCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSH
T ss_pred CCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCH
Confidence 999999999999999999999999999999999999997654568999999998 9999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 325 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 325 ~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
||||+++|+++|||+++|||+|.++++++++++++|+|+||+++. ..+.+||||+|.||++ ++++|++.|+|+
T Consensus 395 ~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~ 468 (490)
T 3ju8_A 395 AAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPSAYYAADYCA 468 (490)
T ss_dssp HHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCEETTHHHHHE
T ss_pred HHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh------HHHhhheeEEEE
Confidence 999999999999999999999999999999999999999999875 4578999999999984 589999999988
Q ss_pred Eec
Q 015249 404 LGD 406 (410)
Q Consensus 404 ~~~ 406 (410)
+..
T Consensus 469 ~~~ 471 (490)
T 3ju8_A 469 YPV 471 (490)
T ss_dssp EEE
T ss_pred Eec
Confidence 753
No 43
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=2e-81 Score=645.09 Aligned_cols=394 Identities=21% Similarity=0.290 Sum_probs=354.9
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCc-------cccCCCCC-cceeEEeeec-eEEEEEc
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGE-------IIPATLPD-RRLFVLKQPV-GVAGAIT 78 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~P~-Gvv~~i~ 78 (410)
+++++++++++.+|+|||+.+++.|+..+++.++||+...+.+.+. ..+...++ ...+..++|+ |||++|+
T Consensus 80 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~ 159 (534)
T 2y53_A 80 QAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFIN 159 (534)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEEC
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEEC
Confidence 4456777999999999999999999999999999999988665431 11211122 2357889997 9999999
Q ss_pred CCCcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHhHHhcCCCccEEEEeC
Q 015249 79 PWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTG 157 (410)
Q Consensus 79 p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~ag-lP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftG 157 (410)
|||||++..++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++|+++|++.+.+..| ++++.|+|||
T Consensus 160 PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTG 236 (534)
T 2y53_A 160 AFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTG 236 (534)
T ss_dssp CTTCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEES
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEEC
Confidence 9999999999999999999999999999999999999999999999 79999999998654433322 5799999999
Q ss_pred cHHHHHHHHHHhc--cccceeeeeccCCCcEEeccCC-----CHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHH
Q 015249 158 STAVGKKLMAGAA--GTVKKVSLELGGNAPCIVFDDA-----DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 230 (410)
Q Consensus 158 s~~~~~~i~~~~~--~~~~~~~~e~gg~~~~iV~~~a-----dl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~ 230 (410)
|+.+|+.|++.++ +++||+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||++++|+|+
T Consensus 237 S~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~ 316 (534)
T 2y53_A 237 SADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVL 316 (534)
T ss_dssp CHHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHH
T ss_pred CHHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHH
Confidence 9999999998875 7899999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc-----C-CCCceecceEeccCCCC-
Q 015249 231 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH-----S-LGMTFYEPTVLSNVKSE- 303 (410)
Q Consensus 231 ~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~-----~-~~~~~~~Ptv~~~~~~~- 303 (410)
++|+++++++++|+|.++++++||++++.+++++.++|+++ .+|+++++||... + ..|+|++|||+.+++++
T Consensus 317 ~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~ 395 (534)
T 2y53_A 317 EALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDN 395 (534)
T ss_dssp HHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGG
T ss_pred HHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccc
Confidence 99999999999999999999999999999999999999999 6899999998642 1 24899999999999877
Q ss_pred -CcccccceecceeeeeecC---CH-----HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhc--ceeEEEECCCCC---
Q 015249 304 -MLVSREEVFGPVAPLLCFK---TE-----EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL--EYGLVGVNEGLI--- 369 (410)
Q Consensus 304 -~~~~~eE~fgPvl~v~~~~---~~-----~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~--~~g~v~iN~~~~--- 369 (410)
+++++||+||||++|++|+ |. ||||+++|+++|||+++|||+|.++++++++++ ++|+|+||++..
T Consensus 396 ~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~ 475 (534)
T 2y53_A 396 ATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHS 475 (534)
T ss_dssp CSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTT
T ss_pred cCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCccccc
Confidence 6899999999999999999 99 999999999999999999999999999999999 899999998642
Q ss_pred ------CCCCCCccCCCCCCCCCC-ChHHHHHhhheeeEEEEe
Q 015249 370 ------STEVAPFGGVKQSGLGRE-GSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 370 ------~~~~~pfGg~~~SG~g~~-~g~~~l~~~~~~k~v~~~ 405 (410)
..+.+||||+|.||+|++ +|.+++++|++.|+|...
T Consensus 476 ~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~ 518 (534)
T 2y53_A 476 QTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAA 518 (534)
T ss_dssp CCCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEE
T ss_pred ccccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecC
Confidence 257899999999999999 799999999999998753
No 44
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=3.5e-80 Score=667.06 Aligned_cols=393 Identities=26% Similarity=0.402 Sum_probs=366.0
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc-CCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKRVYGEIIP-ATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
.+++.+++.++++|+||++.++..|+..+++.++||+..+++..+.... ....+...++.++|+|||++|+|||||+..
T Consensus 586 ~~~~~eLa~~~~~E~GK~~~ea~~Ev~~ai~~lr~~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i 665 (1001)
T 3haz_A 586 ESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAI 665 (1001)
T ss_dssp HHTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHH
T ss_pred HHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHH
Confidence 3456677999999999999999999999999999999999887764321 123467788999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 166 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~ 166 (410)
.++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+ +..|+.||+|+.|+||||+.+|+.|.
T Consensus 666 ~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~ 744 (1001)
T 3haz_A 666 FLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSIN 744 (1001)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998777 99999999999999999999999999
Q ss_pred HHhccc---cceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcccC
Q 015249 167 AGAAGT---VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 243 (410)
Q Consensus 167 ~~~~~~---~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g 243 (410)
+.++++ .+|+++|+|||||+||++|||++.|++.+++|+|.|+||.|+++++||||++++|+|+++|+++++++++|
T Consensus 745 ~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vG 824 (1001)
T 3haz_A 745 RALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIG 824 (1001)
T ss_dssp HHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBS
T ss_pred HHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCC
Confidence 988854 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCC
Q 015249 244 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 323 (410)
Q Consensus 244 ~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~ 323 (410)
+|.++++++||++++.+++++.++|++++.+| ++ +||..+ .+|+|+.|||+.+ +++.+++||+||||++|++|++
T Consensus 825 dp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg~~~-~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~ 899 (1001)
T 3haz_A 825 DPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HFAGPA-PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRP 899 (1001)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEECCC-CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECG
T ss_pred CcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-eccccC-CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCC
Confidence 99999999999999999999999999999888 88 888654 3589999999974 6788999999999999999997
Q ss_pred --HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCC--CCCCCccCCCCCCCC-CCChHHHHHhhhe
Q 015249 324 --EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYGMDEFLE 398 (410)
Q Consensus 324 --~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~--~~~~pfGg~~~SG~g-~~~g~~~l~~~~~ 398 (410)
+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.+.. .+.+||||+|.||+| +.+|++++++|++
T Consensus 900 ~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~ 979 (1001)
T 3haz_A 900 ENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFAT 979 (1001)
T ss_dssp GGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEE
T ss_pred CCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhce
Confidence 79999999999999999999999999999999999999999998753 467899999999999 5699999999999
Q ss_pred eeEEEEec
Q 015249 399 IKYVCLGD 406 (410)
Q Consensus 399 ~k~v~~~~ 406 (410)
.|+|+++.
T Consensus 980 ~K~v~~~~ 987 (1001)
T 3haz_A 980 EQTVTINT 987 (1001)
T ss_dssp EEEEEEEC
T ss_pred eeEEEECC
Confidence 99999874
No 45
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=4.6e-77 Score=609.44 Aligned_cols=382 Identities=19% Similarity=0.226 Sum_probs=344.8
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHH--HhCccc----cCCCC-C-cceeEEeeeceEEEEEcC
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKR--VYGEII----PATLP-D-RRLFVLKQPVGVAGAITP 79 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~--~~~~~~----~~~~~-~-~~~~~~~~P~Gvv~~i~p 79 (410)
++++.++++++.+|+||++.+++.|+..+++.++|++...++ ..+... +...+ + ...++.++|+|||++|+|
T Consensus 66 ~~~~~ela~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 145 (510)
T 1ez0_A 66 EARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGA 145 (510)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECC
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECC
Confidence 456677799999999999999999999999999999998875 333221 11111 2 236789999999999999
Q ss_pred CCcchhhh--hhhccchhccCCeEEEecCCCcHHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHhHHhcCCCccEE
Q 015249 80 WNFPLAMI--TRKVGPALACGCTVVVKPSEFTPLTALAAAELA----LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKI 153 (410)
Q Consensus 80 ~n~p~~~~--~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l----~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v 153 (410)
||||+... .+++++||++||+||+|||+.+|.++..+++++ .++|+|+|++|+++|.+.+.+..|+.||+||.|
T Consensus 146 wN~P~~~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I 225 (510)
T 1ez0_A 146 SNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAV 225 (510)
T ss_dssp SSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEE
T ss_pred ccchhhhhhhHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEE
Confidence 99999985 499999999999999999999999999999987 668999999999999777889999999999999
Q ss_pred EEeCcHHHHHHHHHHhcccc--ceeeeeccCCCcEEeccCCCHH--HHHHHHHHHHHhccCCccccCCeEEEecc-hHHH
Q 015249 154 TFTGSTAVGKKLMAGAAGTV--KKVSLELGGNAPCIVFDDADLN--VAVNGALAAKFRNSGQTCVCANRVLVQEG-IYEK 228 (410)
Q Consensus 154 ~ftGs~~~~~~i~~~~~~~~--~~~~~e~gg~~~~iV~~~adl~--~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~-~~~~ 228 (410)
+||||+.+|+.|++.+++++ +|+++|+|||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ ++|+
T Consensus 226 ~FTGS~~~G~~i~~~aa~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~ 305 (510)
T 1ez0_A 226 GFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQA 305 (510)
T ss_dssp EEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHH
T ss_pred EEeCcHHHHHHHHHHhhccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHH
Confidence 99999999999999999885 9999999999999999999999 99999999999999999999999999999 9999
Q ss_pred HHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHH-HCCCeEeeCCcccCCCCceecceEeccCCCC---C
Q 015249 229 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV-SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSE---M 304 (410)
Q Consensus 229 f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~-~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~---~ 304 (410)
|+++|+++++++++ ||++++.+.+++.+++++++ .+|+++++||. . |+|++|||+.+++++ +
T Consensus 306 f~~~l~~~~~~~~~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~-~---g~~~~Ptvl~~~~~~~~~~ 371 (510)
T 1ez0_A 306 FIETAQSLIRQQSP----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA-E---SPCVASALFVTSSENWRKH 371 (510)
T ss_dssp HHHHHHHHHHHCCC----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC-C---TTSBCCEEEEEEHHHHHHC
T ss_pred HHHHHHHHHHhcCC----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC-C---CCEecCEEEEecCCccccC
Confidence 99999999999863 68899999999999999998 47999999996 2 799999999877777 9
Q ss_pred cccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCH--HHHHHHHhhc--ceeEEEECCCCC---CCCCCCcc
Q 015249 305 LVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL--QRTWRVSEAL--EYGLVGVNEGLI---STEVAPFG 377 (410)
Q Consensus 305 ~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~--~~~~~~~~~~--~~g~v~iN~~~~---~~~~~pfG 377 (410)
++++||+||||++|++|+|.||||+++|+++|||+++|||+|. ++++++++++ ++|+|+||++.. ..+.+|||
T Consensus 372 ~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfG 451 (510)
T 1ez0_A 372 PAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHG 451 (510)
T ss_dssp GGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCC
T ss_pred HHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCC
Confidence 9999999999999999999999999999999999999999987 7899999999 799999998764 35789999
Q ss_pred C-CCCCCCCCC--ChHHHHHhhheeeEEE
Q 015249 378 G-VKQSGLGRE--GSKYGMDEFLEIKYVC 403 (410)
Q Consensus 378 g-~~~SG~g~~--~g~~~l~~~~~~k~v~ 403 (410)
| ++.||+|+. +|.+|+++|++.|++.
T Consensus 452 G~~~~sG~g~~~~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 452 GPYPASTHSASTSVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp CSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred CCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence 9 799999854 8999999999988654
No 46
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=3e-77 Score=613.29 Aligned_cols=382 Identities=24% Similarity=0.306 Sum_probs=344.4
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHH--HhCccc----cC--CCCCcceeEEeeeceEEEEEcC
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLREVDYGAKFIEFYAEEAKR--VYGEII----PA--TLPDRRLFVLKQPVGVAGAITP 79 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~ei~~a~~~~~~~~~~~~~--~~~~~~----~~--~~~~~~~~~~~~P~Gvv~~i~p 79 (410)
++++.++++++.+|+||++.+++.|+..+++.++|++...++ ..+... +. ..++...++.++|+|||++|+|
T Consensus 99 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 178 (528)
T 3v4c_A 99 EARAEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGA 178 (528)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECC
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECC
Confidence 455677799999999999999999999999999999998876 222221 11 0123457889999999999999
Q ss_pred CCcchhhhh--hhccchhccCCeEEEecCCCcHHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHhHHhcCCCccEE
Q 015249 80 WNFPLAMIT--RKVGPALACGCTVVVKPSEFTPLTALAAAELA----LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKI 153 (410)
Q Consensus 80 ~n~p~~~~~--~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l----~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v 153 (410)
||||+...+ +++++||++||+||+|||+.+|.++..+++++ .++|+|+|++|+++|++.+.+..|+.||+|+.|
T Consensus 179 wN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V 258 (528)
T 3v4c_A 179 SNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAV 258 (528)
T ss_dssp SSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEE
T ss_pred CcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEE
Confidence 999999865 89999999999999999999999999888865 578999999999999878899999999999999
Q ss_pred EEeCcHHHHHHHHHHhcccc--ceeeeeccCCCcEEeccCC---CHHHHHHHHHHHHHhccCCccccCCeEEEecc-hHH
Q 015249 154 TFTGSTAVGKKLMAGAAGTV--KKVSLELGGNAPCIVFDDA---DLNVAVNGALAAKFRNSGQTCVCANRVLVQEG-IYE 227 (410)
Q Consensus 154 ~ftGs~~~~~~i~~~~~~~~--~~~~~e~gg~~~~iV~~~a---dl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~-~~~ 227 (410)
+||||+.+|+.|.+.+++++ +|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ ++|
T Consensus 259 ~fTGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d 338 (528)
T 3v4c_A 259 GFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADAD 338 (528)
T ss_dssp EEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHH
T ss_pred EEECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHH
Confidence 99999999999999999988 9999999999999999999 88999999999999999999999999999997 999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCC---C
Q 015249 228 KFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSE---M 304 (410)
Q Consensus 228 ~f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~---~ 304 (410)
+|+++|++++++++. ++.+||++++.+.+++.++++ .+|+++++||.. .|+|++|||+.+++++ |
T Consensus 339 ~f~~~l~~~~~~~~~------~~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~~ 406 (528)
T 3v4c_A 339 RFTTAAVEALAKVAP------QTMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLAD 406 (528)
T ss_dssp HHHHHHHHHHHTCCC------EECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHHC
T ss_pred HHHHHHHHHHHhccc------CCCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCcccccC
Confidence 999999999999864 466899988888777777654 379999999975 4799999999888777 8
Q ss_pred cccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecC--CHHHHHHHHhhcc--eeEEEECCCCC---CCCCCCcc
Q 015249 305 LVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN--NLQRTWRVSEALE--YGLVGVNEGLI---STEVAPFG 377 (410)
Q Consensus 305 ~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~--d~~~~~~~~~~~~--~g~v~iN~~~~---~~~~~pfG 377 (410)
++++||+||||++|++|+|+||||+++|+++|||+++|||+ |.+++++++++++ +|+|+||+++. ..+.+|||
T Consensus 407 ~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfG 486 (528)
T 3v4c_A 407 HALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHG 486 (528)
T ss_dssp GGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCC
T ss_pred hhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCC
Confidence 99999999999999999999999999999999999999999 8999999999998 99999999765 35889999
Q ss_pred C-CCCCCCCCCC--hHHHHHhhheeeE
Q 015249 378 G-VKQSGLGREG--SKYGMDEFLEIKY 401 (410)
Q Consensus 378 g-~~~SG~g~~~--g~~~l~~~~~~k~ 401 (410)
| +|.||+|+++ |++|+++|++.|+
T Consensus 487 G~~~~Sg~gr~~~~G~~gl~~~~~~k~ 513 (528)
T 3v4c_A 487 GPYPASTNFGATSVGTMSIRRFLRPVA 513 (528)
T ss_dssp CTTTTBSCTTCCSSSGGGGGGGEEEEE
T ss_pred CCCCCCCCCCCCCCcHHHHHHhchhHH
Confidence 9 9999999985 9999999999985
No 47
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=1.3e-72 Score=569.62 Aligned_cols=360 Identities=18% Similarity=0.160 Sum_probs=288.7
Q ss_pred HHHHHHHHHHHHHHhhchH----HHHH-HHHHH-HHHHHHHHHHHHHHHh------CccccCC--CCCcceeEEeeeceE
Q 015249 8 RKQKMLYLRLLMRLILGAS----SLLL-REVDY-GAKFIEFYAEEAKRVY------GEIIPAT--LPDRRLFVLKQPVGV 73 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~----~~a~-~ei~~-a~~~~~~~~~~~~~~~------~~~~~~~--~~~~~~~~~~~P~Gv 73 (410)
.+++.++++++.+|+||++ .++. .|+.. ++..++|++...+.+. ++..+.. ..+...++.++|+||
T Consensus 50 ~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GV 129 (468)
T 1vlu_A 50 KANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGV 129 (468)
T ss_dssp HHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCE
T ss_pred HHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHHHHHHhhcCCCCCeecccccCCCCceeEEEecCcce
Confidence 4456677999999999998 8885 89999 8999999998887765 3322211 124456889999999
Q ss_pred EEEEcCCCcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHH----H----cCCCCCcEEEEeCCchhHHhHHh
Q 015249 74 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL----Q----AGIPPGVVNVVMGNAPDIGDALL 145 (410)
Q Consensus 74 v~~i~p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~----~----aglP~g~v~~v~g~~~~~~~~l~ 145 (410)
|++|+||| | ...++++++||++||+||+|||+.+|.++..+++++. + +|+|+|++|+++ ++.+.+..|+
T Consensus 130 V~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~ 206 (468)
T 1vlu_A 130 LLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLD 206 (468)
T ss_dssp EEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGG
T ss_pred EEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHh
Confidence 99999999 9 8999999999999999999999999999999999995 8 999999999999 6667899999
Q ss_pred cCCCccEEEEeCcHHHHHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecch
Q 015249 146 TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 225 (410)
Q Consensus 146 ~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~ 225 (410)
.||+||.|+||||+.+|+.|++.+ .+|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++|||||+++
T Consensus 207 ~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i 282 (468)
T 1vlu_A 207 QDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF 282 (468)
T ss_dssp CTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS
T ss_pred hCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH
Confidence 999999999999999999999876 69999999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHHHHhhccc---CCCCCCCccccccCCHHHHHHHHHH-HHHHHHCCCeEeeCCcccCCCCceecceEeccCC
Q 015249 226 YEKFADAFSKAVKNLKV---GDGFGEGVVQGPLINKAALEKVETF-VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVK 301 (410)
Q Consensus 226 ~~~f~~~L~~~~~~~~~---g~~~~~~~~~gp~~~~~~~~~~~~~-i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~ 301 (410)
|+|+++|+++++++++ |+|.+ .++ +++++ ++++||. | +.||++ ++
T Consensus 283 -d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~~i~~a~----~~~~gG~-----g--~~Ptvl--v~ 331 (468)
T 1vlu_A 283 -SKWWEVLENLTLEGGVTIHATKDL-----------------KTAYFDKLN----ELGKLTE-----A--IQCKTV--DA 331 (468)
T ss_dssp -TTHHHHHHHHHHHHCCCBEECHHH-----------------HHHHHHHHH----HHTCCCH-----H--HHTTBC----
T ss_pred -HHHHHHHHHHHHhcCCeecCCHHH-----------------hcccccccc----eeeccCC-----C--CCCcee--eC
Confidence 9999999999999987 77632 334 55554 4566664 3 689987 78
Q ss_pred CCCcccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCcc----
Q 015249 302 SEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFG---- 377 (410)
Q Consensus 302 ~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfG---- 377 (410)
+++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+.+|||
T Consensus 332 ~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~pfG~Gg~ 411 (468)
T 1vlu_A 332 DEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAE 411 (468)
T ss_dssp -----------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGGCC---------
T ss_pred CCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999987777889999
Q ss_pred -CCCCCCCCCCChHHHHHhhheeeEEEEec
Q 015249 378 -GVKQSGLGREGSKYGMDEFLEIKYVCLGD 406 (410)
Q Consensus 378 -g~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 406 (410)
|+|.||+|++ |++|+++|++.|+|+++.
T Consensus 412 ~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 412 VGISTSKIHAR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp --------------CCSGGGEEEEEEEECS
T ss_pred cceecCCCCCC-cchHHHHhcceEEEEECC
Confidence 9999999999 999999999999998863
No 48
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=1.6e-70 Score=555.36 Aligned_cols=374 Identities=18% Similarity=0.231 Sum_probs=326.2
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHH-HHHHHHHHHHHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchhh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLR-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 86 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~-ei~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~~ 86 (410)
.+++.++++++.+|+||+..+++. ++..+++.+.++.... +..+.. . ..++...+..++|+|||++|+|||||+..
T Consensus 48 ~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~~~~~-~~~g~~-~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~ 124 (464)
T 3k9d_A 48 YGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNYIKDM-KTIGML-K-EDNEKKVMEVAVPLGVVAGLIPSTNPTST 124 (464)
T ss_dssp HHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHTTC-CCSEEE-E-EETTTTEEEEEEECCEEEEEECSSSHHHH
T ss_pred HHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHhhhcc-ccccee-c-cCCCceeEEEEecceEEEEECCCcChHHH
Confidence 455677899999999999888764 4444444443332211 111111 1 12456788999999999999999999999
Q ss_pred hhhhccchhccCCeEEEecCCCcHHHHHHHH----HHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHH
Q 015249 87 ITRKVGPALACGCTVVVKPSEFTPLTALAAA----ELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 162 (410)
Q Consensus 87 ~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~----~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~ 162 (410)
.++++++||++||+||+|||+.+|.++..+. +++.++|+|+|++|++++++.+.+..|+.||+||.|+||||+.+
T Consensus 125 ~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v- 203 (464)
T 3k9d_A 125 VIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM- 203 (464)
T ss_dssp HHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH-
T ss_pred HHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH-
Confidence 9999999999999999999999999998755 55789999999999999977889999999999999999999984
Q ss_pred HHHHHHhccccceeeeecc-CCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHH----
Q 015249 163 KKLMAGAAGTVKKVSLELG-GNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV---- 237 (410)
Q Consensus 163 ~~i~~~~~~~~~~~~~e~g-g~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~---- 237 (410)
.+.++++.||+ +|+| ||+|+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++.
T Consensus 204 ---~~~a~~~~kpv-lelG~G~~p~iV~~dADl~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 279 (464)
T 3k9d_A 204 ---VKAAYSSGTPA-IGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFL 279 (464)
T ss_dssp ---HHHHTTSSSCE-EEBCCCCCEEEECTTSCHHHHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEEC
T ss_pred ---HHHHHhcCCcE-EeeCCCCCeEEECCCCCHHHHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhc
Confidence 45566788998 8888 99999999999999999999999999999999999999999999999999999985
Q ss_pred ---hhcccCCCC-CCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceec
Q 015249 238 ---KNLKVGDGF-GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFG 313 (410)
Q Consensus 238 ---~~~~~g~~~-~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fg 313 (410)
+.+++|+|. ++++++||+++.++++++.++++.++.+|+++++||.. ++++++++. ||+||
T Consensus 280 ~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~ga~vl~gg~~--------------~v~~~~~~~-~E~fg 344 (464)
T 3k9d_A 280 SDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEET--------------KVGAKIPYS-REKLA 344 (464)
T ss_dssp CHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCTTCCEEEEECC--------------CCSTTCGGG-SCCCS
T ss_pred ChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcCCCEEEEcCCC--------------CCCCCCccc-ccccC
Confidence 467889887 77899999999999999999999888899999998853 356777765 89999
Q ss_pred ceeeeeecCCHHHHH----HHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCC---------CCCCCCccCCC
Q 015249 314 PVAPLLCFKTEEEAI----HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI---------STEVAPFGGVK 380 (410)
Q Consensus 314 Pvl~v~~~~~~~eai----~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~---------~~~~~pfGg~~ 380 (410)
||++|++|+|+|||| +++|+++|||+++|||+|.+.++++++++++|+|+||+++. ..+.+|||| +
T Consensus 345 PVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G 423 (464)
T 3k9d_A 345 PILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-G 423 (464)
T ss_dssp SEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-T
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-c
Confidence 999999999999997 79999999999999999999999999999999999999874 468899998 7
Q ss_pred CCCCCCCChHHHHHhhheeeEEEEe
Q 015249 381 QSGLGREGSKYGMDEFLEIKYVCLG 405 (410)
Q Consensus 381 ~SG~g~~~g~~~l~~~~~~k~v~~~ 405 (410)
.+|.|.++|..++++|++.|+|...
T Consensus 424 ~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 424 AVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp GGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred CCCCCcCCCCCCHHHheEEEEEEec
Confidence 7899999999999999999999764
No 49
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=9.3e-71 Score=555.40 Aligned_cols=350 Identities=17% Similarity=0.136 Sum_probs=297.6
Q ss_pred HHHHHHHHHHHHHHh-------hchHH----HHHHHHHHHHHHHHHHHHHHHHHhCccccCC--CCCcceeEEeeeceEE
Q 015249 8 RKQKMLYLRLLMRLI-------LGASS----LLLREVDYGAKFIEFYAEEAKRVYGEIIPAT--LPDRRLFVLKQPVGVA 74 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~-------g~~~~----~a~~ei~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv 74 (410)
++++.++++++.+|+ ||++. +++.|+..+++.++|++...+++.++..+.. ..+...++.++|+|||
T Consensus 65 ~~~~~ela~~~~~e~g~~~~~~Gk~~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv 144 (463)
T 2h5g_A 65 TDQRDEILLANKKDLEEAEGRLAAPLLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVL 144 (463)
T ss_dssp HHTHHHHHHHHHHHHHHHTTTSCHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEE
T ss_pred HHhHHHHHHHHHHHhhcccccCCCchhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceE
Confidence 345566789999999 59998 4678999999999999988777666543211 1345678999999999
Q ss_pred EEEcCCCcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHhHHhcCCCc
Q 015249 75 GAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQV 150 (410)
Q Consensus 75 ~~i~p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~a----glP~g~v~~v~g~~~~~~~~l~~~~~v 150 (410)
++|+||| |.... +++++||++||+||+|||+.+|.++..|++++.++ | |+|++|+++| +.+.+..|+.||+|
T Consensus 145 ~~I~p~n-P~n~p-~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~v 220 (463)
T 2h5g_A 145 LVIFESR-PDCLP-QVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMI 220 (463)
T ss_dssp EEEESSC-TTHHH-HHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCC
T ss_pred EEEecCC-cHHHH-HHHHHHHHcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCc
Confidence 9999887 77666 89999999999999999999999999999999999 9 9999999998 67789999999999
Q ss_pred cEEEEeCcHHHHHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHH
Q 015249 151 RKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 230 (410)
Q Consensus 151 ~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~ 230 (410)
|.|+||||+.+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.| ||.|++++|||||++++|
T Consensus 221 d~I~FTGS~~~G~~i~~~aa--l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d--- 294 (463)
T 2h5g_A 221 DLIIPRGSSQLVRDIQKAAK--GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR--- 294 (463)
T ss_dssp SEEEEESCHHHHHHHHHHCS--SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT---
T ss_pred CEEEEECCHHHHHHHHHhcC--CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc---
Confidence 99999999999999999887 899999999999999999999999999999999999 999999999999999998
Q ss_pred HHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccccc
Q 015249 231 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREE 310 (410)
Q Consensus 231 ~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE 310 (410)
||+ ++ +++++++++|++++.|+... ..++|+ +++|++++||
T Consensus 295 ----------------------~p~-----~~---~~i~~~~~~Ga~v~~G~~~~-~~g~~~--------~~~~~i~~eE 335 (463)
T 2h5g_A 295 ----------------------TPL-----FD---QIIDMLRVEQVKIHAGPKFA-SYLTFS--------PSEVKSLRTE 335 (463)
T ss_dssp ----------------------SHH-----HH---HHHHHHHHTTCEEEECHHHH-C-----------------CCSSCC
T ss_pred ----------------------hHH-----HH---HHHHHHHhCCCEEEeCCccc-ccCccC--------CCCchHHhcc
Confidence 233 23 34777788999998554322 123432 5789999999
Q ss_pred eecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCC--CC-
Q 015249 311 VFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG--RE- 387 (410)
Q Consensus 311 ~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g--~~- 387 (410)
+||||++|++|+|+||||+++|++++||+++|||+|.++++++++++++|+|+||++....+.+||||+|+||+| ++
T Consensus 336 ~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~r~~ 415 (463)
T 2h5g_A 336 YGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIH 415 (463)
T ss_dssp CCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEECCSSS
T ss_pred ccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCCCCccc
Confidence 999999999999999999999999999999999999999999999999999999998777789999999999999 65
Q ss_pred -ChHHHHHhhheeeEEEEec
Q 015249 388 -GSKYGMDEFLEIKYVCLGD 406 (410)
Q Consensus 388 -~g~~~l~~~~~~k~v~~~~ 406 (410)
+|++|+++|++.|+|+++.
T Consensus 416 ~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 416 ARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp CCEECCGGGGEEEEEEEECS
T ss_pred CCCHHHHHHhceeEEEEECC
Confidence 9999999999999998863
No 50
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=9.9e-70 Score=543.75 Aligned_cols=350 Identities=20% Similarity=0.200 Sum_probs=305.9
Q ss_pred HHHHHHHHHHHHHHhhchH----HHHH--------HHHHHHHHHHHHHHHHHHHHhCccccCC--CCCcceeEEeeeceE
Q 015249 8 RKQKMLYLRLLMRLILGAS----SLLL--------REVDYGAKFIEFYAEEAKRVYGEIIPAT--LPDRRLFVLKQPVGV 73 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~----~~a~--------~ei~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gv 73 (410)
++++.++++++.+|+||+. .++. .|+..+++.++|++.++++ .++..+.. ..+...++.++|+||
T Consensus 50 ~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GV 128 (427)
T 1o20_A 50 DERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGP 128 (427)
T ss_dssp HHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCC
T ss_pred HHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHHHHHHHHhcccc-cCccccccccCCCceeEEEeeccee
Confidence 4456677999999999986 4553 6999999999999987754 34332211 124557889999999
Q ss_pred EEEEcCCCcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHH----HcCCCCCcEEEEeCC-chhHHhHHhcCC
Q 015249 74 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL----QAGIPPGVVNVVMGN-APDIGDALLTSP 148 (410)
Q Consensus 74 v~~i~p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~----~aglP~g~v~~v~g~-~~~~~~~l~~~~ 148 (410)
|++|+||| +...++++++||++||+||+|||+.+|.++..+.+++. ++|+|+|++|+++|. ..+.+..|..||
T Consensus 129 V~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~ 206 (427)
T 1o20_A 129 IGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLRE 206 (427)
T ss_dssp EEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTT
T ss_pred EEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCC
Confidence 99999886 46888999999999999999999999999999999997 789999999999984 456788889899
Q ss_pred CccEEEEeCcHHHHHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHH
Q 015249 149 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 228 (410)
Q Consensus 149 ~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~ 228 (410)
+|+.|+||||+.+|+.|++.+ .+|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++|||||++++|+
T Consensus 207 ~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~ 282 (427)
T 1o20_A 207 YLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKE 282 (427)
T ss_dssp TCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHH
T ss_pred CccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHH
Confidence 999999999999999999887 59999999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcccc
Q 015249 229 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSR 308 (410)
Q Consensus 229 f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~ 308 (410)
|+++|++++++++++ +.||... .+ |+ ||| +++++++++
T Consensus 283 f~~~l~~~~~~~~~~-----------------------------------~~gg~~~--~~-~~-Ptl---~~~~~~i~~ 320 (427)
T 1o20_A 283 FLPVIVEELRKHGVE-----------------------------------VRGCEKT--RE-IV-PDV---VPATEDDWP 320 (427)
T ss_dssp HHHHHHHHHHHTTCE-----------------------------------EEECHHH--HH-HS-TTS---EECCGGGTT
T ss_pred HHHHHHHHHHHcCCe-----------------------------------eecChhh--hh-hC-Ccc---cCCCcchhh
Confidence 999999999987642 1223221 12 33 885 345788999
Q ss_pred cceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCC---
Q 015249 309 EEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG--- 385 (410)
Q Consensus 309 eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g--- 385 (410)
||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+.....+.+||||.++||+|
T Consensus 321 eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGg~~~SG~g~~~ 400 (427)
T 1o20_A 321 TEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQR 400 (427)
T ss_dssp CCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSS
T ss_pred cccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEEECCCCccCCCCCCCCcccccccCCc
Confidence 99999999999999999999999999999999999999999999999999999999997777788999999999997
Q ss_pred -CCChHHHHHhhheeeEEEEec
Q 015249 386 -REGSKYGMDEFLEIKYVCLGD 406 (410)
Q Consensus 386 -~~~g~~~l~~~~~~k~v~~~~ 406 (410)
+++|++|+++|++.|+|+++.
T Consensus 401 ~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 401 FHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp SSCCEECCTGGGEEEEEEEECS
T ss_pred ccCCChHHHHHHhceEEEEECC
Confidence 468999999999999998864
No 51
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=2.3e-69 Score=543.70 Aligned_cols=351 Identities=21% Similarity=0.214 Sum_probs=293.6
Q ss_pred HHHHHHHHHHHHHhhchHH----HHH--------HHHHHHHHHHHHHHHHHHHHhCccccC--CCCCcceeEEeeeceEE
Q 015249 9 KQKMLYLRLLMRLILGASS----LLL--------REVDYGAKFIEFYAEEAKRVYGEIIPA--TLPDRRLFVLKQPVGVA 74 (410)
Q Consensus 9 ~~~~~~~~~~~~e~g~~~~----~a~--------~ei~~a~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv 74 (410)
+++.++++++.+|+||+.. +++ .|+..+++.+++++.+.+. .++..+. ...+...++.++|+|||
T Consensus 63 ~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV 141 (444)
T 4ghk_A 63 RDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVEGLRQVATLPDP-IGEMSNLKYRPSGIQVGQMRVPLGVI 141 (444)
T ss_dssp HSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECSEE
T ss_pred hhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHHHHHHHHhhccc-cCccCCcccCCCCccceEEEeccEEE
Confidence 4456678899999998843 444 3789999999999987753 2333221 12356788999999999
Q ss_pred EEEcCCCcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHH----HHcCCCCCcEEEEeCCch-hHHhHHhcCCC
Q 015249 75 GAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELA----LQAGIPPGVVNVVMGNAP-DIGDALLTSPQ 149 (410)
Q Consensus 75 ~~i~p~n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l----~~aglP~g~v~~v~g~~~-~~~~~l~~~~~ 149 (410)
++|+||| | ...++++++||++||+||+|||+.+|.++..+.+++ .++|+|+|++|+++|.+. +.+..|..||+
T Consensus 142 ~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~ 219 (444)
T 4ghk_A 142 GIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEY 219 (444)
T ss_dssp EEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTT
T ss_pred EEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCC
Confidence 9999998 8 588899999999999999999999999999999986 799999999999998554 47788888999
Q ss_pred ccEEEEeCcHHHHHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHH
Q 015249 150 VRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKF 229 (410)
Q Consensus 150 v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f 229 (410)
|+.|+||||+.+|+.+++.+ .+|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++|||||++++|+|
T Consensus 220 vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f 295 (444)
T 4ghk_A 220 VDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAV 295 (444)
T ss_dssp CSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHH
T ss_pred ccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHH
Confidence 99999999999999998876 69999999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHhhccc---CCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceecceEeccCCCCCcc
Q 015249 230 ADAFSKAVKNLKV---GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLV 306 (410)
Q Consensus 230 ~~~L~~~~~~~~~---g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~ 306 (410)
+++|+++++++++ |+|. ..++++++. . | ++ +++++++
T Consensus 296 ~~~l~~~~~~~~~~~~g~p~-----------------~~~~i~~a~--------~-------G------~~--~~~~~~~ 335 (444)
T 4ghk_A 296 LSPLGRLYREKGVELRVDAD-----------------ARAVLEAAG--------V-------G------PL--VDATDED 335 (444)
T ss_dssp HHHHHHHHHHTTCEEEECHH-----------------HHHHHHHTT--------C-------C------CC--EECCSGG
T ss_pred HHHHHHHHHHcCCeecCCHH-----------------HHHHHHhcc--------c-------C------cc--cCCCchh
Confidence 9999999999887 6642 134455431 1 1 11 3467899
Q ss_pred cccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCCCCCCCC-
Q 015249 307 SREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG- 385 (410)
Q Consensus 307 ~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGg~~~SG~g- 385 (410)
++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||.++||+|
T Consensus 336 ~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~pfGg~~~sG~g~ 415 (444)
T 4ghk_A 336 WRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISN 415 (444)
T ss_dssp GTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEEEEECGGGCSTTTTTCSCCSEEEC
T ss_pred hhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEEEcCCCccCCCCCcCCcccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999998877788999999999998
Q ss_pred ---CCChHHHHHhhheeeEEEEec
Q 015249 386 ---REGSKYGMDEFLEIKYVCLGD 406 (410)
Q Consensus 386 ---~~~g~~~l~~~~~~k~v~~~~ 406 (410)
+++|++|+++||+.|+|+++.
T Consensus 416 ~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 416 DKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp CSSSCCEEECGGGGEEEEEEEEEE
T ss_pred CcccCCChhHHHhhceEEEEEECC
Confidence 678999999999999998864
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.2e-66 Score=525.32 Aligned_cols=373 Identities=18% Similarity=0.226 Sum_probs=304.1
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHH-HHHHHHHHH-HHHHHHHHHHhCccccCCCCCcceeEEeeeceEEEEEcCCCcchh
Q 015249 8 RKQKMLYLRLLMRLILGASSLLLR-EVDYGAKFI-EFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLA 85 (410)
Q Consensus 8 ~~~~~~~~~~~~~e~g~~~~~a~~-ei~~a~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~p~~ 85 (410)
.+++.++++++.+|+||++.+++. |+..+++.+ ++++.. +..+. .+ ..++...+..++|+|||++|+|||||++
T Consensus 43 ~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~~~~--~~~g~-~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~ 118 (452)
T 3my7_A 43 NQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKYKDE--QTCGI-LE-EDDNLGTMTIAEPVGIICGIVPTTNPTS 118 (452)
T ss_dssp HHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHTTC--CCSEE-C--------CEEEEEECCEEEEEECTTSTTH
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhhhc--ccccc-cc-CCCCCceEEEecCceEEEEEcCCCChHH
Confidence 455677899999999999999986 777777766 444321 11111 11 1234567889999999999999999999
Q ss_pred hhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHH
Q 015249 86 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL----QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 161 (410)
Q Consensus 86 ~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~----~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~ 161 (410)
..++++++||++||+||+|||+.+|.++..+.+++. ++|+|+|++|++++++.+.+..|+.||+|+.|+||||+.+
T Consensus 119 ~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~ 198 (452)
T 3my7_A 119 TAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGM 198 (452)
T ss_dssp HHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHH
T ss_pred HHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHH
Confidence 999999999999999999999999999988877764 7999999999999987889999999999999999999986
Q ss_pred HHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccCCccccCCeEEEecchHHHHHHHHHHHHhhcc
Q 015249 162 GKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK 241 (410)
Q Consensus 162 ~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~ 241 (410)
++ .++++.||+++|+|||+|+||++|||++.|++.+++++|+++||.|+++++||||+++||+|+++|+++
T Consensus 199 ~~----~a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~----- 269 (452)
T 3my7_A 199 VK----AAYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH----- 269 (452)
T ss_dssp HH----HHHTSSSCEEECC--CEEEEECTTSCHHHHHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT-----
T ss_pred HH----HHHhcCCCEEecCCCCCeEEEeCCCCHHHHHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh-----
Confidence 54 455678999999999999999999999999999999999999999999999999999999999999886
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC---CCCceecceE-------eccCCCCCcccccce
Q 015249 242 VGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTV-------LSNVKSEMLVSREEV 311 (410)
Q Consensus 242 ~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~---~~~~~~~Ptv-------~~~~~~~~~~~~eE~ 311 (410)
+||++++++.+++.++++++...|+++ +|+.... ..|+|++||+ +.++++++++.+ |+
T Consensus 270 ----------~gpli~~~~~~~v~~~i~~~~~~~a~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~ 337 (452)
T 3my7_A 270 ----------KAHVLSKTDADKVRKVLLIDGALNAKI-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EK 337 (452)
T ss_dssp ----------TEEECCHHHHHHHHHHHEETTEECGGG-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CC
T ss_pred ----------CCCcCCHHHHHHHHHHHHhhcccCCeE-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-Cc
Confidence 499999999999999998765667776 4665321 2478999997 778899999875 89
Q ss_pred ecceeeeeecCCHHHHHHHhhcCC----CCcEEEEecCCHHHHHH---HHhhcceeEEEECCCCCCC-----------CC
Q 015249 312 FGPVAPLLCFKTEEEAIHMANDTN----AGLAAYIFTNNLQRTWR---VSEALEYGLVGVNEGLIST-----------EV 373 (410)
Q Consensus 312 fgPvl~v~~~~~~~eai~~~n~~~----~gl~~sv~s~d~~~~~~---~~~~~~~g~v~iN~~~~~~-----------~~ 373 (410)
||||++|++|+|+||||+++|++. |||+++|||+|.+.+++ +++++++|+|+||+++.+. +.
T Consensus 338 FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~G~V~VN~~~~~Gg~G~~~~f~~~~~ 417 (452)
T 3my7_A 338 LSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPS 417 (452)
T ss_dssp SSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHHHHCCCSEEEESCCCC---------------
T ss_pred cCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHHHhCCEEEEEECCCCCCcccccccccCcCce
Confidence 999999999999999999999974 99999999999887777 9999999999999976521 11
Q ss_pred CCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 015249 374 APFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 406 (410)
Q Consensus 374 ~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 406 (410)
+++ |++..|.+..++..+.++|++.|+|..+.
T Consensus 418 ~t~-g~g~~Gg~~~~~nv~~~~l~n~~~v~~~~ 449 (452)
T 3my7_A 418 LTL-GCGSWGGNSISENVGPKHLINKKTVAKRA 449 (452)
T ss_dssp --------------CCCCCGGGGEEEEEEECCC
T ss_pred Eee-eccccCCCccCCCCChhHeeeeeEEEeec
Confidence 111 34444555567778899999999988764
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=97.84 E-value=0.0083 Score=58.02 Aligned_cols=259 Identities=17% Similarity=0.173 Sum_probs=148.9
Q ss_pred CCcceeEEeeeceEEEEEcCCC---cchhhhhhhccchhccCCeE-EE-ecCCCcHHHHHHHHHHHHHcCCCCCcEEEEe
Q 015249 60 PDRRLFVLKQPVGVAGAITPWN---FPLAMITRKVGPALACGCTV-VV-KPSEFTPLTALAAAELALQAGIPPGVVNVVM 134 (410)
Q Consensus 60 ~~~~~~~~~~P~Gvv~~i~p~n---~p~~~~~~~~~~AL~~Gn~v-vl-kps~~~~~~~~~l~~~l~~aglP~g~v~~v~ 134 (410)
+|......+.|+--|++..|+- ||. +++...+||-.+|+.= |+ .|.+. -.....+.-+...+|.. .+..
T Consensus 119 ~G~~~g~~~~Pi~~VGlYVPGG~A~ypS-svLM~aiPAkVAGV~~Iv~~tPp~~-G~i~p~iL~AA~l~Gv~----eIy~ 192 (423)
T 4gic_A 119 DGTLLGQKITPLDRVGLYVPGGKAAYPS-SVLMNAVPAKVAGVPELIMAVPAPR-GELNALVLAAAYISGVD----RVFR 192 (423)
T ss_dssp TSCEEEEEEEECSEEEEECCCSTTCCHH-HHHHHHHHHHHHTCSEEEEECCCGG-GCCCHHHHHHHHHHTCC----EEEC
T ss_pred CCCEEEEEEEEecceeEEeeCCCCchhh-HHHHhhccHHHhCCCeEEEecCCCC-CCccHHHHHHHHhcCCc----EEEE
Confidence 5666778899999999999953 665 4445678999999973 33 34332 12223344445677775 3444
Q ss_pred CCchhHHhHHhc----CCCccEEEEeCcHHHHHHHHHHhccccceeeeecc-CCCcEEe--ccCCCHHHHHHHHHHHHHh
Q 015249 135 GNAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAPCIV--FDDADLNVAVNGALAAKFR 207 (410)
Q Consensus 135 g~~~~~~~~l~~----~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~g-g~~~~iV--~~~adl~~a~~~i~~~~~~ 207 (410)
-.|.+.-.+|.- -|.||.|+=.|..-+..+=+... ..|-+.+- |-+=++| ++++|.+..+..++.-+=+
T Consensus 193 vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~----g~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQAEH 268 (423)
T 4gic_A 193 IGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVF----GQVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQAEH 268 (423)
T ss_dssp CCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHB----TTBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHHTT
T ss_pred cCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhc----CCcCcccccccceEEEEeCCCCCHHHHHHHHHHhhcc
Confidence 335555545543 67899999889887665533322 22333332 4333333 3458999988887765544
Q ss_pred ccCCccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC
Q 015249 208 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL 287 (410)
Q Consensus 208 ~~Gq~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~ 287 (410)
... .+.++|..+ ++|.+++.+++.+.- --+... +.+.+.+++
T Consensus 269 d~~-----a~~iLvT~s--~~la~~V~~~i~~~l-----------~~l~r~---~i~~~sl~~----------------- 310 (423)
T 4gic_A 269 DED-----AQAILISPD--AAHLEAVQASIERLL-----------PGMERA---EVIRTSLER----------------- 310 (423)
T ss_dssp CTT-----CEEEEEESC--HHHHHHHHHHHHHHG-----------GGCTTH---HHHHHHHHH-----------------
T ss_pred CCC-----CeEEEEeCc--HHHHHHHHHHHHHHH-----------hhCccH---HHHHHHHhc-----------------
Confidence 322 445666554 445555544443320 000111 111111110
Q ss_pred CCceecceEeccCCCCCcccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcc-eeEEEECC
Q 015249 288 GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLVGVNE 366 (410)
Q Consensus 288 ~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~-~g~v~iN~ 366 (410)
--.++.++|.+|+++++|..-.= ..-|.++|+. .+..+++ +|.|++..
T Consensus 311 ---------------------------~g~ii~v~~~~ea~~~~N~~APE-HLel~~~~~~---~~l~~i~nAGaIFlG~ 359 (423)
T 4gic_A 311 ---------------------------RGGMILVDDLEQAAAVANRIAPE-HLELSVESPE---VLVESIRNAGAIFMGR 359 (423)
T ss_dssp ---------------------------HCEEEECSSHHHHHHHHHHHCCS-EEEEESSCHH---HHGGGCCCCSEEEEC-
T ss_pred ---------------------------CceEEEEeehHHHHHHHHhhChH-HhhhhhCCHH---HHHhhCcEeceeecCC
Confidence 01234569999999999985332 5677888875 4677766 99999986
Q ss_pred CCC---------CCCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 015249 367 GLI---------STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 402 (410)
Q Consensus 367 ~~~---------~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v 402 (410)
++. .++-+|-+ |+.+..+.-+.+.|++.-++
T Consensus 360 ~tp~~~GDY~aG~NHvLPT~-----G~Ar~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 360 YTAEALGDYCAGPNHVLPTS-----GTARFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp ---------------CCCCT-----TGGGTCCCCCGGGGEEEEEE
T ss_pred CCchhhhhcCcCCCccCCCC-----CcccccCCCCHHHeeeeeeE
Confidence 553 13345544 44555666677888886654
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=97.62 E-value=0.012 Score=56.97 Aligned_cols=260 Identities=19% Similarity=0.181 Sum_probs=151.7
Q ss_pred CcceeEEeeeceEEEEEcCC---CcchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 015249 61 DRRLFVLKQPVGVAGAITPW---NFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNA 137 (410)
Q Consensus 61 ~~~~~~~~~P~Gvv~~i~p~---n~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~ 137 (410)
|...-..+.|+--|++..|+ -||. +.+...+||-.+|+.=|+--+|-. ....+.-+...+|..+ +..-.|
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~ypS-svLM~aiPAkVAGV~~Iv~~tPp~--i~p~iL~AA~l~Gv~e----Iy~vGG 186 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPPP--IADEILYAAQLCGVQD----VFNVGG 186 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCTH-HHHHHHHHHHHHTCSEEEEEECSS--CCHHHHHHHHHTTCCE----EEECCH
T ss_pred CcEEEEEEeehheEEEEecCCCCCchh-HHHHhhccHhhcCCCeEEEECCCC--CCHHHHHHHHHcCCCE----Eeeccc
Confidence 55566789999999999996 4664 444557899999987665333211 2223344456777763 333225
Q ss_pred hhHHhHHhc----CCCccEEEEeCcHHHHHHHHHHhccccceeeeecc-CCCcEEe--ccCCCHHHHHHHHHHHHHhccC
Q 015249 138 PDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAPCIV--FDDADLNVAVNGALAAKFRNSG 210 (410)
Q Consensus 138 ~~~~~~l~~----~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~g-g~~~~iV--~~~adl~~a~~~i~~~~~~~~G 210 (410)
.+.-.+|.- -|.||.|+=.|..-+..+=+... .....|-+.+- |-+=++| ++++|.+..+..++.-+=+..
T Consensus 187 AQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs-~~~G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAEHd~- 264 (434)
T 1kae_A 187 AQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVS-QRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGP- 264 (434)
T ss_dssp HHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHH-HCTTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTTCT-
T ss_pred HHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhH-hhcCccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhccCC-
Confidence 554444432 57899999888876544322220 01123434432 4443333 446899998888776554432
Q ss_pred CccccCCeEEEecchHHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCc
Q 015249 211 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 290 (410)
Q Consensus 211 q~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gp~~~~~~~~~~~~~i~~~~~~ga~~~~gg~~~~~~~~ 290 (410)
..+.++|..+ ++|.+++.+++.+.- .-+... + .+++++
T Consensus 265 ----~a~aiLvT~s--~~la~~V~~ev~~ql-----------~~lpr~---~----ia~~sl------------------ 302 (434)
T 1kae_A 265 ----DSQVILLTPA--ADMARRVAEAVERQL-----------AELPRA---E----TARQAL------------------ 302 (434)
T ss_dssp ----TCEEEEEESC--HHHHHHHHHHHHHHH-----------TTCTTH---H----HHHHHH------------------
T ss_pred ----CCcEEEEECC--HHHHHHHHHHHHHHH-----------HhCChH---H----HHHHHH------------------
Confidence 2445666544 444444444443210 000000 0 111111
Q ss_pred eecceEeccCCCCCcccccceecceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcc-eeEEEECCCCC
Q 015249 291 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLVGVNEGLI 369 (410)
Q Consensus 291 ~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~~~-~g~v~iN~~~~ 369 (410)
..- .++.++|++|++++.|..-.= ..-|.++|+. .+..+++ +|.|++..++.
T Consensus 303 ----------------------~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp~---~~l~~I~nAGaIFlG~~tp 355 (434)
T 1kae_A 303 ----------------------NAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGSVFLGDWSP 355 (434)
T ss_dssp ----------------------TTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCSCSEEEESTTCC
T ss_pred ----------------------HcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCHH---HHHhhcCcccchhcCCCCc
Confidence 112 456679999999999985333 5678888875 5677766 99999997764
Q ss_pred ---------CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 015249 370 ---------STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 403 (410)
Q Consensus 370 ---------~~~~~pfGg~~~SG~g~~~g~~~l~~~~~~k~v~ 403 (410)
.++-+|-+|. .+..+.-+.+.|++.-++.
T Consensus 356 e~~GDY~aG~NHvLPT~G~-----AR~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 356 ESAGDYASGTNHVLPTYGY-----TATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp HHHHHHTSSSCCCCCCTTG-----GGTCCCSCGGGGEEEEEEE
T ss_pred hhhcccccCCCcccCCCCc-----eeccCCCcHHhccceeeEE
Confidence 2455665554 4556666778888876553
No 55
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=49.95 E-value=22 Score=29.27 Aligned_cols=114 Identities=11% Similarity=0.004 Sum_probs=71.0
Q ss_pred eEEEEEcCCC-cchhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHH-cCCCCCcEEEEeC-CchhHHhHHhcCC
Q 015249 72 GVAGAITPWN-FPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQ-AGIPPGVVNVVMG-NAPDIGDALLTSP 148 (410)
Q Consensus 72 Gvv~~i~p~n-~p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~-aglP~g~v~~v~g-~~~~~~~~l~~~~ 148 (410)
|.|+++...+ =+-...+.+-...+..|..++--. -|+ +.|.+ .|+|-..++=++. ..+++++. +.+.
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT~-----gTa----~~L~e~~Gl~v~~v~k~~eGG~p~I~d~-I~~g 81 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYATG-----TTG----NLISRATGMNVNAMLSGPMGGDQQVGAL-ISEG 81 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEET-----THH----HHHHHHHCCCCEEECCGGGTHHHHHHHH-HHTT
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEcc-----HHH----HHHHHHhCceeEEEEecCCCCCchHHHH-HHCC
Confidence 6555554433 355555555566777788777542 333 44555 8999766653332 22344554 4566
Q ss_pred CccEEEEeCc-------HHHHHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccC
Q 015249 149 QVRKITFTGS-------TAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 210 (410)
Q Consensus 149 ~v~~v~ftGs-------~~~~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~G 210 (410)
.|+.|.||-+ ..-+..|++.+-....|+...+ ..++.++.+.+++..
T Consensus 82 eIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 82 KIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp CCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSH---------------HHHHHHHTSGGGGSC
T ss_pred CccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 7999999877 4567888888877766665554 456677777666653
No 56
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=46.13 E-value=57 Score=25.59 Aligned_cols=73 Identities=16% Similarity=0.178 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCcee-----cceEeccCCCCCcccccceecceeeeeecCCHHHHHHHhh
Q 015249 259 AALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFY-----EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 332 (410)
Q Consensus 259 ~~~~~~~~~i~~~~~~ga~~~~gg~~~~-~~~~~~-----~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n 332 (410)
+..+...++.++..+.|. ++.++...+ ..+..+ .|+|.++.-.+ ..|..|= ++|+.++|.|||++++.
T Consensus 30 ~~~~~~~~~~~~l~~~G~-lv~g~~L~~~~~a~~Vr~~~g~~~VtdGPfaE----tkE~lgG-~~iie~~s~deA~e~A~ 103 (124)
T 1s7i_A 30 AIVDECMTYSDQLGKAGH-YIASHALQSVQTATTLRHQGGRLAMTDGPFAE----TKEQLGG-FYLIEARDLNQALQIAA 103 (124)
T ss_dssp HHHHHHHHHHHHHHHHTC-EEEEEECCCGGGCEEEEECSSCEEEEESCSSC----CSSEEEE-EEEEEESSHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCCE-EEecCcCCCCcceEEEEecCCceeEecCCCcC----Cccccee-EEEEEeCCHHHHHHHHH
Confidence 345556666666666664 333322211 111222 24444433222 2355554 56779999999999998
Q ss_pred cCCCC
Q 015249 333 DTNAG 337 (410)
Q Consensus 333 ~~~~g 337 (410)
..++.
T Consensus 104 ~~P~~ 108 (124)
T 1s7i_A 104 KIPPG 108 (124)
T ss_dssp TCGGG
T ss_pred hCCcc
Confidence 87654
No 57
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=42.47 E-value=15 Score=31.04 Aligned_cols=121 Identities=10% Similarity=-0.035 Sum_probs=75.7
Q ss_pred eEEeeec-eEEEEEcCCCc-chhhhhhhccchhccCCeEEEecCCCcHHHHHHHHHHHHH-cCCCCCcEEEEeC-CchhH
Q 015249 65 FVLKQPV-GVAGAITPWNF-PLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQ-AGIPPGVVNVVMG-NAPDI 140 (410)
Q Consensus 65 ~~~~~P~-Gvv~~i~p~n~-p~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~-aglP~g~v~~v~g-~~~~~ 140 (410)
....-|. |.|+++...+- +-...+.+-...+..|..++-- .-|+ +.|.+ .|+|...++=++. ..+++
T Consensus 20 ~~~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~AT-----~gTa----~~L~e~~Gl~v~~v~k~~eGG~pqI 90 (178)
T 1vmd_A 20 YKIFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYAT-----GTTG----ALLQEKLGLKVHRLKSGPLGGDQQI 90 (178)
T ss_dssp EEEEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEEC-----HHHH----HHHHHHHCCCCEECSCGGGTHHHHH
T ss_pred eeeeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEEc-----hHHH----HHHHHHhCceeEEEeecCCCCCchH
Confidence 3334444 76666555433 5555566666777788888753 3444 44555 8999765553332 12344
Q ss_pred HhHHhcCCCccEEEEeCc-------HHHHHHHHHHhccccceeeeeccCCCcEEeccCCCHHHHHHHHHHHHHhccC
Q 015249 141 GDALLTSPQVRKITFTGS-------TAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 210 (410)
Q Consensus 141 ~~~l~~~~~v~~v~ftGs-------~~~~~~i~~~~~~~~~~~~~e~gg~~~~iV~~~adl~~a~~~i~~~~~~~~G 210 (410)
++. +..-.|+.|.||-+ ..-+..|++.+-....|+...+ ..++.++.+.+++..
T Consensus 91 ~d~-I~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tnl---------------atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 91 GAM-IAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAITR---------------STADFLISSPLMNDV 151 (178)
T ss_dssp HHH-HHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESSH---------------HHHHHHHHSGGGGSC
T ss_pred HHH-HHCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 554 45667999999977 2356788888877766665554 467777777777654
No 58
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=40.07 E-value=18 Score=31.88 Aligned_cols=65 Identities=14% Similarity=0.120 Sum_probs=44.6
Q ss_pred hhhccchhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHH
Q 015249 88 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTA 160 (410)
Q Consensus 88 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~ 160 (410)
+..++..+.+||-||++.+. +.....+..+|... +|.+.++++..+ .+- ...-....+.+..+..
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~l-LP~~c~~l~~~s-~~Y----~~~~~cnilgls~~v~ 85 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTM-LPVGCVRIIPYS-SQY----EEAYRCNFLGLSPHVQ 85 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGG-SCGGGCCEEEEE-SSC----CCTTTCSEEEECTTCC
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHh-CCHHHHhccccc-hhh----cchhheeeecCCCCcc
Confidence 34566688899999999766 56667778888888 999999998642 211 1123355566655544
No 59
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=39.82 E-value=66 Score=24.04 Aligned_cols=57 Identities=19% Similarity=0.179 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHH-HCCCeEeeCCcccCCCCceecceEeccCCCCCcccccceecceeeeeecCCHHHHHHHhhcC
Q 015249 258 KAALEKVETFVEDAV-SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT 334 (410)
Q Consensus 258 ~~~~~~~~~~i~~~~-~~ga~~~~gg~~~~~~~~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~ 334 (410)
++.+++..+.....+ ..|++++..|.. |.++.+.. .+-+.|+.|+|.+.|.++.|+.
T Consensus 17 ~e~y~~Y~~~~~~~~~~~gGr~l~~g~~---------~~~~eG~~-----------~~~~viieFpS~~aa~~~~~s~ 74 (99)
T 2fiu_A 17 SERYKDYVSTAKPAFERFGANFLARGGS---------VTELEGTA-----------RARNVVIEFPSVQHAIDCYNSP 74 (99)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEESCC---------EEEEESCC-----------CSEEEEEEESSHHHHHHHHHSH
T ss_pred HHHHHHHHHHHHHHHHHcCcEEEEECCC---------ceEEecCC-----------cCeEEEEECCCHHHHHHHHcCH
Confidence 333333333333333 368888876643 34554321 1367889999999999998864
No 60
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=37.00 E-value=27 Score=28.20 Aligned_cols=63 Identities=6% Similarity=-0.002 Sum_probs=43.1
Q ss_pred HHHHHHcCCCCCcEEEEeCC-c----hhHHhHHhcCCCccEEEEeCcH-----HHHHHHHHHhccccceeeeec
Q 015249 117 AELALQAGIPPGVVNVVMGN-A----PDIGDALLTSPQVRKITFTGST-----AVGKKLMAGAAGTVKKVSLEL 180 (410)
Q Consensus 117 ~~~l~~aglP~g~v~~v~g~-~----~~~~~~l~~~~~v~~v~ftGs~-----~~~~~i~~~~~~~~~~~~~e~ 180 (410)
++.|.+.|+|-..++-++.. . +++.+.+ .+..|+.|.+|-+. .-+..|++.+-....|++..+
T Consensus 60 a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i-~~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~~ 132 (143)
T 2yvq_A 60 SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLI-RDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTNF 132 (143)
T ss_dssp HHHHHHTTCCCEEECCGGGC-----CBCHHHHH-HTTSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECSH
T ss_pred HHHHHHcCCeEEEEEeccCCCcccccccHHHHH-HCCCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcCH
Confidence 44567899997777665532 2 4455554 45679999998655 367788888877777776654
No 61
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=31.92 E-value=15 Score=29.54 Aligned_cols=80 Identities=9% Similarity=0.042 Sum_probs=47.0
Q ss_pred ccchhccCCeEEEecCCCcHHHHHHHHHHHHH-cCCCCCcEEEEe-CCchhHHhHHhcCCCccEEEEeCc-------HHH
Q 015249 91 VGPALACGCTVVVKPSEFTPLTALAAAELALQ-AGIPPGVVNVVM-GNAPDIGDALLTSPQVRKITFTGS-------TAV 161 (410)
Q Consensus 91 ~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~-aglP~g~v~~v~-g~~~~~~~~l~~~~~v~~v~ftGs-------~~~ 161 (410)
-...+..|..++-- .-|+ +.|.+ .|+|-..++=++ +..+++++.+ .+-.|+.|.||-+ ..-
T Consensus 24 ~~~~ll~Gf~l~AT-----~gTa----~~L~e~~Gl~v~~v~k~~~eG~p~I~d~I-~~geIdlVInt~~pl~~~~h~~D 93 (134)
T 2xw6_A 24 RHREVLARFPLVAT-----GTTG----RRIEEATGLTVEKLLSGPLGGDQQMGARV-AEGRILAVIFFRDPLTAQPHEPD 93 (134)
T ss_dssp HTHHHHTTSCEEEC-----HHHH----HHHHHHHCCCCEECSCGGGTHHHHHHHHH-HTTCEEEEEEECCTTTCCTTSCC
T ss_pred HHHHHhCCCEEEEc-----cHHH----HHHHHhhCceEEEEEecCCCCcchHHHHH-HCCCccEEEEccCcccCCCccch
Confidence 33444556655532 3344 44555 799976665454 4234455554 5567999999987 224
Q ss_pred HHHHHHHhccccceeeeec
Q 015249 162 GKKLMAGAAGTVKKVSLEL 180 (410)
Q Consensus 162 ~~~i~~~~~~~~~~~~~e~ 180 (410)
+..|++.+-....|+...+
T Consensus 94 ~~~IrR~A~~~~IP~~T~l 112 (134)
T 2xw6_A 94 VQALLRVCDVHGVPLATNP 112 (134)
T ss_dssp SHHHHHHHHHHTCCEECSH
T ss_pred HHHHHHHHHHcCCCeEcCH
Confidence 5667777766555554443
No 62
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=30.26 E-value=1.4e+02 Score=27.51 Aligned_cols=103 Identities=12% Similarity=0.081 Sum_probs=61.4
Q ss_pred eEEEecCCC---cHHHHHHHHHHHHHcCCCCCcEEEEeCCch-hH---HhHHhcCCCccEEEEeCcHHHHHHHHHHh--c
Q 015249 100 TVVVKPSEF---TPLTALAAAELALQAGIPPGVVNVVMGNAP-DI---GDALLTSPQVRKITFTGSTAVGKKLMAGA--A 170 (410)
Q Consensus 100 ~vvlkps~~---~~~~~~~l~~~l~~aglP~g~v~~v~g~~~-~~---~~~l~~~~~v~~v~ftGs~~~~~~i~~~~--~ 170 (410)
.+|+.|... .......+.+.|.+.|.. +.+...... +. ...+. ....|.|+..|+..+-..+...+ .
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~---~~~~~t~~~~~a~~~~~~~~-~~~~d~vvv~GGDGTv~~v~~~l~~~ 103 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYE---TSAYATEKIGDATLEAERAM-HENYDVLIAAGGDGTLNEVVNGIAEK 103 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEE---EEEEECCSTTHHHHHHHHHT-TTTCSEEEEEECHHHHHHHHHHHTTC
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCe---EEEEEecCcchHHHHHHHHh-hcCCCEEEEEcCchHHHHHHHHHHhC
Confidence 356666654 234456777888888764 334332221 21 22222 24578999999999998888887 4
Q ss_pred ccccee-eeecc-CCCcEEec-cCCCHHHHHHHHHHHHH
Q 015249 171 GTVKKV-SLELG-GNAPCIVF-DDADLNVAVNGALAAKF 206 (410)
Q Consensus 171 ~~~~~~-~~e~g-g~~~~iV~-~~adl~~a~~~i~~~~~ 206 (410)
....|+ .+-+| |+.-+-.+ -..|++.+++.+..+..
T Consensus 104 ~~~~pl~iIP~GT~N~lAr~Lg~~~~~~~al~~i~~g~~ 142 (337)
T 2qv7_A 104 PNRPKLGVIPMGTVNDFGRALHIPNDIMGALDVIIEGHS 142 (337)
T ss_dssp SSCCEEEEEECSSCCHHHHHTTCCSSHHHHHHHHHHTCE
T ss_pred CCCCcEEEecCCcHhHHHHHcCCCCCHHHHHHHHHcCCc
Confidence 444453 56666 33333222 23588889988877543
No 63
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=27.55 E-value=2e+02 Score=26.35 Aligned_cols=103 Identities=15% Similarity=0.124 Sum_probs=59.3
Q ss_pred eEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCch-hH---HhHHhcCCCccEEEEeCcHHHHHHHHHHhc----c
Q 015249 100 TVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAP-DI---GDALLTSPQVRKITFTGSTAVGKKLMAGAA----G 171 (410)
Q Consensus 100 ~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~-~~---~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~----~ 171 (410)
.+|++|..........+.+.|.+.|.. +.+...... +. ...+.. ...|.|+..|+..+-..+...+. .
T Consensus 33 ~vi~Np~sg~~~~~~~i~~~l~~~g~~---~~~~~t~~~~~~~~~~~~~~~-~~~d~vvv~GGDGTl~~v~~~l~~~~~~ 108 (332)
T 2bon_A 33 LLILNGKSTDNLPLREAIMLLREEGMT---IHVRVTWEKGDAARYVEEARK-FGVATVIAGGGDGTINEVSTALIQCEGD 108 (332)
T ss_dssp EEEECSSSTTCHHHHHHHHHHHTTTCC---EEEEECCSTTHHHHHHHHHHH-HTCSEEEEEESHHHHHHHHHHHHHCCSS
T ss_pred EEEECCCCCCCchHHHHHHHHHHcCCc---EEEEEecCcchHHHHHHHHHh-cCCCEEEEEccchHHHHHHHHHhhcccC
Confidence 355666554333445677778888775 344332111 11 222222 24688999999999888887776 3
Q ss_pred cccee-eeeccCCC-cEEecc-CCCHHHHHHHHHHHHH
Q 015249 172 TVKKV-SLELGGNA-PCIVFD-DADLNVAVNGALAAKF 206 (410)
Q Consensus 172 ~~~~~-~~e~gg~~-~~iV~~-~adl~~a~~~i~~~~~ 206 (410)
...|+ ++-+|--| .+--.. ..|++.+++.+..+..
T Consensus 109 ~~~plgiiP~Gt~N~fa~~l~i~~~~~~al~~i~~g~~ 146 (332)
T 2bon_A 109 DIPALGILPLGTANDFATSVGIPEALDKALKLAIAGDA 146 (332)
T ss_dssp CCCEEEEEECSSSCHHHHHTTCCSSHHHHHHHHHHSEE
T ss_pred CCCeEEEecCcCHHHHHHhcCCCCCHHHHHHHHHcCCe
Confidence 44454 35566333 332122 3578888888876543
No 64
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=27.47 E-value=88 Score=28.02 Aligned_cols=87 Identities=9% Similarity=-0.040 Sum_probs=53.8
Q ss_pred EEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHHHhccc--cce-ee
Q 015249 101 VVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT--VKK-VS 177 (410)
Q Consensus 101 vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~--~~~-~~ 177 (410)
+|.+|.+........+.+.|.+.|..- .....|.|+.-|+..+-....+..... .+| +-
T Consensus 5 ii~n~~~~~~~~~~~l~~~l~~~g~~v------------------~~~~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilG 66 (272)
T 2i2c_A 5 ITSKGDEKSDLLRLNMIAGFGEYDMEY------------------DDVEPEIVISIGGDGTFLSAFHQYEERLDEIAFIG 66 (272)
T ss_dssp EEECCSHHHHHHHHHHHHHHTTSSCEE------------------CSSSCSEEEEEESHHHHHHHHHHTGGGTTTCEEEE
T ss_pred EEECCCHHHHHHHHHHHHHHHHCCCEe------------------CCCCCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEE
Confidence 445654434444555666677776531 024578899999999988888877654 566 44
Q ss_pred eeccCCCcEEeccCCCHHHHHHHHHHHH
Q 015249 178 LELGGNAPCIVFDDADLNVAVNGALAAK 205 (410)
Q Consensus 178 ~e~gg~~~~iV~~~adl~~a~~~i~~~~ 205 (410)
+.+|-.+.+-=....|++.+++.+..+.
T Consensus 67 In~G~lgfl~~~~~~~~~~~l~~l~~g~ 94 (272)
T 2i2c_A 67 IHTGHLGFYADWRPAEADKLVKLLAKGE 94 (272)
T ss_dssp EESSSCCSSCCBCGGGHHHHHHHHHTTC
T ss_pred EeCCCCCcCCcCCHHHHHHHHHHHHcCC
Confidence 5666444221112457888888887653
No 65
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=27.21 E-value=3e+02 Score=26.07 Aligned_cols=83 Identities=17% Similarity=0.242 Sum_probs=49.8
Q ss_pred cCCeEEEecCCCcHHHHHHHHHHHHHcCCC-CCcEEEEeCCchh----HHhHHhcCCCccEEEE------eCcHHHHHHH
Q 015249 97 CGCTVVVKPSEFTPLTALAAAELALQAGIP-PGVVNVVMGNAPD----IGDALLTSPQVRKITF------TGSTAVGKKL 165 (410)
Q Consensus 97 ~Gn~vvlkps~~~~~~~~~l~~~l~~aglP-~g~v~~v~g~~~~----~~~~l~~~~~v~~v~f------tGs~~~~~~i 165 (410)
.||..|+-=+ .-.+...+.++...|+- .+.+.+.-+...+ ..+.++++|.++.|.. +-...+++.|
T Consensus 247 ~g~I~ii~Ng---~Gl~~~t~D~i~~~G~~~aN~lD~gG~a~~e~~~~al~~~l~d~~v~~ilv~i~ggi~~~~~vA~~i 323 (397)
T 3ufx_B 247 DGNIGIIGNG---AGLVMYTLDLVNRVGGKPANFLDIGGGAKADVVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGV 323 (397)
T ss_dssp SSSEEEEESS---HHHHHHHHHHHHHTTCCBSEEEECCSCCCHHHHHHHHHHHHTCTTCCEEEEEEEEEEEESHHHHHHH
T ss_pred CCcEEEEecC---ccHHHHHHHHHHHcCCCcCCcEecCCCCCHHHHHHHHHHHHcCCCCCEEEEECCCCCCCHHHHHHHH
Confidence 4666666432 45556677888888874 3323322222222 3356788999998763 3346788888
Q ss_pred HHHhccc--cceeeeeccC
Q 015249 166 MAGAAGT--VKKVSLELGG 182 (410)
Q Consensus 166 ~~~~~~~--~~~~~~e~gg 182 (410)
.....+. .+|++..+.|
T Consensus 324 ~~a~~~~~~~kPvvv~~~G 342 (397)
T 3ufx_B 324 IRALEEGLLTKPVVMRVAG 342 (397)
T ss_dssp HHHHTTTCCCSCEEEEEEE
T ss_pred HHHHHhhCCCCcEEEEccC
Confidence 8776543 4666655544
No 66
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=25.43 E-value=49 Score=26.24 Aligned_cols=44 Identities=23% Similarity=0.256 Sum_probs=30.4
Q ss_pred CcEEEEeCCchhHHhHHhcCCCccEEEEeCcHHHHHHHHHHhcc
Q 015249 128 GVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 171 (410)
Q Consensus 128 g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~ 171 (410)
|.+++++|+..+.-...+..+++..+.+||+......+.+.+.+
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~ 96 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEE 96 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHH
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHH
Confidence 57888888766544444432579999999998777777666543
No 67
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=22.85 E-value=1.1e+02 Score=25.15 Aligned_cols=51 Identities=22% Similarity=0.135 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHhHH---hcCCCccEEEEeCcHHH
Q 015249 111 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDAL---LTSPQVRKITFTGSTAV 161 (410)
Q Consensus 111 ~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l---~~~~~v~~v~ftGs~~~ 161 (410)
..+..|.+.|.+.|..--...+++.+......++ ....+.|.|..||+...
T Consensus 40 ~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~ 93 (178)
T 3iwt_A 40 ESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGY 93 (178)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSS
T ss_pred chHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCccc
Confidence 4567899999999987655666655433344443 33456888999998753
No 68
>2v9v_A Selenocysteine-specific elongation factor; transcription, protein conformational change, transcription elongation factor SELB; 1.10A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35
Probab=22.34 E-value=1.2e+02 Score=23.58 Aligned_cols=82 Identities=11% Similarity=0.122 Sum_probs=49.6
Q ss_pred HHHHHHHHHhccCCcccc--CCeEEEecchHHHHHHHHHHHHhhcccCCCCCCCcc-------ccccCCHHHHHHHHHHH
Q 015249 198 VNGALAAKFRNSGQTCVC--ANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV-------QGPLINKAALEKVETFV 268 (410)
Q Consensus 198 ~~~i~~~~~~~~Gq~C~a--~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~-------~gp~~~~~~~~~~~~~i 268 (410)
+...+........-.|.. ....+++.+.++++.+++.+.+..+.--+|+.++.. ..|-++...++ .++
T Consensus 34 l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~yH~~~P~~~G~~keeLr~~~~~~~~~~~~~---~ll 110 (135)
T 2v9v_A 34 TRKLLQSMAAAGQVTLLRVENDLYAISTERYQAWWQAVTRALEEFHSRYPLRPGLAREELRSRYFSRLPARVYQ---ALL 110 (135)
T ss_dssp HHHHHHHHHHTTCEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHCTTSSCEEHHHHHHHHCTTSCHHHHH---HHH
T ss_pred HHHHHHHHHhCCcEEEEecCCCeEEecHHHHHHHHHHHHHHHHHHHHhCCCccCCCHHHHHHHhcccCCHHHHH---HHH
Confidence 334444454444444544 234489999999999999999998666666665432 22323444444 445
Q ss_pred HHHHHCCCeEeeCC
Q 015249 269 EDAVSKGAKVLLGG 282 (410)
Q Consensus 269 ~~~~~~ga~~~~gg 282 (410)
+..+++|.-...|+
T Consensus 111 ~~l~~~g~l~~~~~ 124 (135)
T 2v9v_A 111 EEWSREGRLQLAAN 124 (135)
T ss_dssp HHHHHTTSEEECSS
T ss_pred HHHHHCCCEEecCC
Confidence 66666776555554
No 69
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=21.88 E-value=1.7e+02 Score=20.30 Aligned_cols=37 Identities=19% Similarity=0.182 Sum_probs=29.2
Q ss_pred ccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 015249 96 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGN 136 (410)
Q Consensus 96 ~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~ 136 (410)
..+|-+|+|-.|-. +..++.++.+.++|+ ++-.+.|+
T Consensus 11 ~~~n~vVikT~pG~---A~~va~~iD~~~~~e-I~GTIAGD 47 (71)
T 1b4b_A 11 GTGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGD 47 (71)
T ss_dssp EETTEEEEEESTTC---HHHHHHHHHHHCCTT-EEEEEECS
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEeeC
Confidence 47999999977644 678888999998886 88888764
No 70
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=21.72 E-value=1.7e+02 Score=20.68 Aligned_cols=39 Identities=23% Similarity=0.258 Sum_probs=30.1
Q ss_pred hhccCCeEEEecCCCcHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 015249 94 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGN 136 (410)
Q Consensus 94 AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~g~ 136 (410)
.=.++|-+|+|-.|-. +..++.++....+|+ ++-.+.|+
T Consensus 17 i~~~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGD 55 (79)
T 2zfz_A 17 TDDSGNLAVLRTPPGA---AHYLASAIDRAALPQ-VVGTIAGD 55 (79)
T ss_dssp EEEETTEEEEECSTTC---HHHHHHHHHHHCCTT-EEEEEECS
T ss_pred EeecCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 3347999999977644 678888999998876 88888764
No 71
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=20.06 E-value=2.9e+02 Score=24.83 Aligned_cols=100 Identities=11% Similarity=0.012 Sum_probs=57.9
Q ss_pred eEEEecCCCc---HHHHHHHHHHHHHcCCCCCcEEEEeCCchh----HHhHHhcCCCccEEEEeCcHHHHHHHHHHhcc-
Q 015249 100 TVVVKPSEFT---PLTALAAAELALQAGIPPGVVNVVMGNAPD----IGDALLTSPQVRKITFTGSTAVGKKLMAGAAG- 171 (410)
Q Consensus 100 ~vvlkps~~~---~~~~~~l~~~l~~aglP~g~v~~v~g~~~~----~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~- 171 (410)
.+|+.|.... ......+.+.|.+.|.. +.+....... ....+. ...+.|+..|+..+-..+...+..
T Consensus 12 ~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~---~~~~~t~~~~~a~~~~~~~~--~~~d~vv~~GGDGTl~~v~~~l~~~ 86 (304)
T 3s40_A 12 LLIVNPKAGQGDLHTNLTKIVPPLAAAFPD---LHILHTKEQGDATKYCQEFA--SKVDLIIVFGGDGTVFECTNGLAPL 86 (304)
T ss_dssp EEEECTTCSSSCHHHHHHHHHHHHHHHCSE---EEEEECCSTTHHHHHHHHHT--TTCSEEEEEECHHHHHHHHHHHTTC
T ss_pred EEEECcccCCCchHHHHHHHHHHHHHcCCe---EEEEEccCcchHHHHHHHhh--cCCCEEEEEccchHHHHHHHHHhhC
Confidence 3566775432 33445677788888764 3443321222 223332 367889999999999888877765
Q ss_pred -cccee-eeecc-CCCcEEec-cCCCHHHHHHHHHHH
Q 015249 172 -TVKKV-SLELG-GNAPCIVF-DDADLNVAVNGALAA 204 (410)
Q Consensus 172 -~~~~~-~~e~g-g~~~~iV~-~~adl~~a~~~i~~~ 204 (410)
...|+ ++-+| ||+.+--. -..|++.+++.+..+
T Consensus 87 ~~~~~l~iiP~Gt~N~~ar~lg~~~~~~~a~~~i~~g 123 (304)
T 3s40_A 87 EIRPTLAIIPGGTCNDFSRTLGVPQNIAEAAKLITKE 123 (304)
T ss_dssp SSCCEEEEEECSSCCHHHHHTTCCSSHHHHHHHHTTC
T ss_pred CCCCcEEEecCCcHHHHHHHcCCCccHHHHHHHHHhC
Confidence 33343 45555 34332111 234788888877653
Done!