Query 015250
Match_columns 410
No_of_seqs 144 out of 1136
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 04:31:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015250.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015250hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2596 Aminopeptidase I zinc 100.0 3E-101 7E-106 752.8 31.6 404 1-409 70-479 (479)
2 PTZ00371 aspartyl aminopeptida 100.0 5.9E-98 1E-102 772.2 40.6 403 1-409 61-465 (465)
3 PRK02813 putative aminopeptida 100.0 2.6E-95 6E-100 746.2 40.3 368 1-398 60-427 (428)
4 PF02127 Peptidase_M18: Aminop 100.0 3.9E-96 8E-101 750.7 26.8 385 1-396 47-432 (432)
5 COG1362 LAP4 Aspartyl aminopep 100.0 5.6E-95 1.2E-99 720.7 32.5 374 1-398 62-435 (437)
6 PRK02256 putative aminopeptida 100.0 8.2E-94 1.8E-98 738.2 37.6 376 1-398 78-461 (462)
7 PRK09864 putative peptidase; P 100.0 1.3E-67 2.9E-72 528.8 27.6 300 2-401 43-343 (356)
8 COG1363 FrvX Cellulase M and r 100.0 1.7E-64 3.8E-69 502.9 29.2 304 2-403 45-350 (355)
9 TIGR03107 glu_aminopep glutamy 100.0 2.3E-64 5.1E-69 505.7 28.1 301 2-401 41-343 (350)
10 PF05343 Peptidase_M42: M42 gl 100.0 1.9E-63 4.1E-68 488.7 21.2 291 2-391 1-292 (292)
11 PRK09961 exoaminopeptidase; Pr 100.0 2E-60 4.4E-65 477.5 27.4 293 2-401 43-335 (344)
12 TIGR03106 trio_M42_hydro hydro 100.0 4.6E-57 9.9E-62 452.6 28.7 290 2-398 46-341 (343)
13 PF01546 Peptidase_M20: Peptid 98.6 1.7E-07 3.6E-12 85.0 9.7 159 185-398 26-189 (189)
14 TIGR01883 PepT-like peptidase 98.4 7.2E-06 1.6E-10 82.6 15.6 74 318-397 288-361 (361)
15 PRK10199 alkaline phosphatase 97.5 0.0001 2.3E-09 74.4 4.5 49 189-242 138-186 (346)
16 TIGR01893 aa-his-dipept aminoa 97.4 0.0049 1.1E-07 64.9 16.5 79 317-399 397-476 (477)
17 PF04389 Peptidase_M28: Peptid 97.3 0.00025 5.3E-09 64.3 4.1 154 188-387 20-177 (179)
18 PRK13381 peptidase T; Provisio 97.0 0.0019 4E-08 66.4 7.8 78 317-400 326-403 (404)
19 PRK05469 peptidase T; Provisio 97.0 0.0021 4.6E-08 66.1 7.8 79 317-401 328-406 (408)
20 PRK12891 allantoate amidohydro 96.7 0.0047 1E-07 63.8 7.5 78 317-401 331-410 (414)
21 PRK08554 peptidase; Reviewed 96.5 0.0068 1.5E-07 63.3 7.7 77 317-399 360-436 (438)
22 PRK07473 carboxypeptidase; Pro 96.0 0.0098 2.1E-07 60.7 5.5 75 319-399 300-375 (376)
23 PRK07338 hypothetical protein; 95.9 0.015 3.4E-07 59.4 6.4 78 318-401 321-399 (402)
24 TIGR01882 peptidase-T peptidas 95.9 0.013 2.8E-07 60.5 5.7 78 317-400 330-407 (410)
25 PRK09290 allantoate amidohydro 95.8 0.023 5E-07 58.6 7.4 77 317-400 332-410 (413)
26 PRK08652 acetylornithine deace 95.8 0.016 3.5E-07 57.7 6.1 78 317-400 267-345 (347)
27 TIGR01246 dapE_proteo succinyl 95.7 0.026 5.5E-07 57.1 7.1 76 318-399 294-370 (370)
28 PRK12890 allantoate amidohydro 95.6 0.037 8E-07 57.0 7.8 78 316-400 332-411 (414)
29 PRK06837 acetylornithine deace 95.5 0.032 6.9E-07 57.8 7.1 79 318-401 344-423 (427)
30 COG2195 PepD Di- and tripeptid 95.4 0.075 1.6E-06 55.2 9.2 96 300-401 312-413 (414)
31 PRK13983 diaminopimelate amino 95.4 0.051 1.1E-06 55.3 7.8 75 317-397 323-398 (400)
32 TIGR01902 dapE-lys-deAc N-acet 95.3 0.041 8.8E-07 55.0 6.8 79 317-400 255-334 (336)
33 PRK04443 acetyl-lysine deacety 95.1 0.06 1.3E-06 54.1 7.2 77 318-399 271-348 (348)
34 TIGR01880 Ac-peptdase-euk N-ac 95.1 0.069 1.5E-06 54.6 7.8 78 318-401 319-399 (400)
35 PRK08588 succinyl-diaminopimel 94.8 0.073 1.6E-06 53.9 7.1 77 318-399 296-375 (377)
36 PRK13009 succinyl-diaminopimel 94.5 0.11 2.3E-06 52.6 7.3 75 319-399 298-373 (375)
37 TIGR03176 AllC allantoate amid 94.3 0.11 2.4E-06 53.7 7.2 78 317-401 325-404 (406)
38 PRK12893 allantoate amidohydro 94.3 0.099 2.1E-06 53.7 6.8 78 316-400 330-409 (412)
39 PRK15026 aminoacyl-histidine d 94.3 0.13 2.9E-06 54.5 7.9 81 316-400 402-483 (485)
40 PRK08651 succinyl-diaminopimel 94.3 0.11 2.4E-06 52.9 7.0 77 318-400 313-391 (394)
41 PRK06915 acetylornithine deace 94.2 0.12 2.7E-06 53.2 7.3 81 317-402 338-420 (422)
42 PRK08596 acetylornithine deace 94.0 0.16 3.5E-06 52.5 7.5 80 318-403 338-419 (421)
43 PRK13004 peptidase; Reviewed 93.8 0.078 1.7E-06 54.3 4.9 78 318-400 317-396 (399)
44 PRK12892 allantoate amidohydro 93.7 0.15 3.3E-06 52.3 6.7 76 317-399 332-409 (412)
45 PRK09133 hypothetical protein; 93.5 0.16 3.4E-06 53.4 6.5 77 318-400 386-469 (472)
46 PRK08737 acetylornithine deace 93.2 0.2 4.3E-06 51.0 6.4 73 319-398 290-363 (364)
47 PRK07318 dipeptidase PepV; Rev 93.1 0.12 2.6E-06 54.3 4.9 75 318-399 388-464 (466)
48 PRK00466 acetyl-lysine deacety 92.8 0.34 7.4E-06 48.6 7.5 77 318-400 266-343 (346)
49 PRK15026 aminoacyl-histidine d 92.7 0.19 4.1E-06 53.4 5.7 67 184-282 101-171 (485)
50 PRK06446 hypothetical protein; 92.4 0.28 6E-06 51.0 6.4 80 318-401 351-435 (436)
51 PRK13799 unknown domain/N-carb 92.0 0.34 7.4E-06 52.7 6.8 79 316-401 509-590 (591)
52 PRK13590 putative bifunctional 91.8 0.34 7.4E-06 52.7 6.5 79 316-401 507-588 (591)
53 PRK08596 acetylornithine deace 91.4 0.2 4.2E-06 51.9 4.0 52 185-239 108-160 (421)
54 TIGR01879 hydantase amidase, h 91.3 0.53 1.1E-05 48.3 7.0 76 316-398 323-400 (401)
55 PRK07906 hypothetical protein; 91.1 0.66 1.4E-05 47.9 7.5 77 317-399 340-426 (426)
56 PRK07079 hypothetical protein; 91.0 0.63 1.4E-05 48.8 7.4 81 318-402 374-457 (469)
57 TIGR03526 selenium_YgeY putati 90.9 0.46 9.9E-06 48.6 6.1 77 318-399 315-393 (395)
58 TIGR03320 ygeY M20/DapE family 90.8 0.46 9.9E-06 48.6 6.0 78 318-400 315-394 (395)
59 PRK06133 glutamate carboxypept 90.7 0.41 8.9E-06 49.4 5.6 77 319-399 328-406 (410)
60 PRK13013 succinyl-diaminopimel 90.6 0.76 1.6E-05 47.3 7.4 77 320-402 344-424 (427)
61 TIGR01910 DapE-ArgE acetylorni 90.6 0.51 1.1E-05 47.8 6.0 68 317-390 305-374 (375)
62 PRK13381 peptidase T; Provisio 90.5 0.42 9.1E-06 49.0 5.4 52 185-240 124-180 (404)
63 PRK08652 acetylornithine deace 90.4 0.54 1.2E-05 46.7 6.0 49 186-239 78-127 (347)
64 PRK07522 acetylornithine deace 89.7 0.74 1.6E-05 46.6 6.3 71 319-399 312-383 (385)
65 COG2234 Iap Predicted aminopep 88.7 0.6 1.3E-05 48.3 4.9 53 190-247 224-276 (435)
66 PRK09104 hypothetical protein; 88.4 1.3 2.8E-05 46.4 7.3 77 318-400 381-462 (464)
67 PRK05111 acetylornithine deace 88.2 1.1 2.4E-05 45.4 6.4 50 349-399 330-380 (383)
68 COG0624 ArgE Acetylornithine d 87.8 1.6 3.6E-05 44.7 7.4 78 318-401 329-408 (409)
69 TIGR01910 DapE-ArgE acetylorni 87.2 0.77 1.7E-05 46.5 4.6 53 185-240 95-148 (375)
70 PRK07205 hypothetical protein; 87.2 0.6 1.3E-05 48.6 3.8 40 361-400 399-442 (444)
71 PRK06915 acetylornithine deace 87.1 0.7 1.5E-05 47.6 4.2 52 185-239 124-176 (422)
72 PRK08201 hypothetical protein; 87.0 2.1 4.5E-05 44.7 7.7 76 318-400 373-454 (456)
73 PRK08651 succinyl-diaminopimel 86.8 0.74 1.6E-05 46.8 4.2 49 185-239 104-153 (394)
74 PRK09104 hypothetical protein; 86.4 0.91 2E-05 47.6 4.7 50 187-239 120-170 (464)
75 PRK06133 glutamate carboxypept 86.3 0.82 1.8E-05 47.1 4.3 52 185-239 126-178 (410)
76 PRK00466 acetyl-lysine deacety 85.8 0.98 2.1E-05 45.3 4.4 48 185-239 82-130 (346)
77 TIGR01902 dapE-lys-deAc N-acet 85.5 1.1 2.3E-05 44.7 4.5 49 185-240 72-121 (336)
78 PRK07473 carboxypeptidase; Pro 85.4 1 2.2E-05 45.9 4.4 52 185-239 102-154 (376)
79 TIGR01892 AcOrn-deacetyl acety 85.3 1.2 2.5E-05 44.7 4.7 47 348-395 316-363 (364)
80 TIGR01882 peptidase-T peptidas 84.7 1.4 3.1E-05 45.4 5.2 48 185-238 135-182 (410)
81 PRK07907 hypothetical protein; 84.5 3.1 6.6E-05 43.4 7.6 78 318-400 365-447 (449)
82 PRK08201 hypothetical protein; 84.5 1.2 2.6E-05 46.5 4.6 51 185-238 110-161 (456)
83 PRK08588 succinyl-diaminopimel 84.1 1.3 2.8E-05 44.8 4.5 52 185-239 90-142 (377)
84 PRK13983 diaminopimelate amino 83.9 1.2 2.5E-05 45.3 4.0 49 185-236 107-156 (400)
85 PRK13007 succinyl-diaminopimel 83.8 2.1 4.6E-05 42.7 5.8 49 347-396 302-351 (352)
86 PRK06156 hypothetical protein; 83.8 1.3 2.7E-05 47.4 4.4 40 362-401 473-516 (520)
87 PRK07318 dipeptidase PepV; Rev 83.3 1.4 3E-05 46.3 4.4 52 185-239 108-160 (466)
88 PRK07205 hypothetical protein; 83.2 2.8 6.1E-05 43.6 6.6 51 185-238 106-157 (444)
89 PRK07522 acetylornithine deace 82.5 1.6 3.5E-05 44.1 4.4 49 186-239 95-144 (385)
90 PRK08262 hypothetical protein; 82.5 1.7 3.8E-05 45.7 4.8 78 318-400 400-484 (486)
91 TIGR01892 AcOrn-deacetyl acety 81.8 2.8 6E-05 42.0 5.8 10 20-29 61-70 (364)
92 TIGR01886 dipeptidase dipeptid 81.4 2.7 5.9E-05 44.2 5.8 75 318-399 388-464 (466)
93 PRK08554 peptidase; Reviewed 81.1 1.7 3.8E-05 45.3 4.2 48 185-237 93-141 (438)
94 PRK05111 acetylornithine deace 80.9 2.2 4.7E-05 43.2 4.7 50 185-239 101-151 (383)
95 PRK09133 hypothetical protein; 80.5 2.1 4.6E-05 44.9 4.6 52 185-239 131-184 (472)
96 PRK04443 acetyl-lysine deacety 80.3 4 8.8E-05 40.9 6.3 48 185-238 81-129 (348)
97 TIGR01880 Ac-peptdase-euk N-ac 80.2 2.3 4.9E-05 43.5 4.6 52 185-239 102-155 (400)
98 PRK06156 hypothetical protein; 78.3 5.5 0.00012 42.6 6.9 13 19-31 111-123 (520)
99 PRK07338 hypothetical protein; 78.1 2.5 5.4E-05 43.2 4.1 53 184-239 118-171 (402)
100 KOG2195 Transferrin receptor a 77.8 11 0.00024 42.0 9.1 145 186-379 362-514 (702)
101 PRK08262 hypothetical protein; 77.7 3.8 8.2E-05 43.2 5.5 52 185-239 144-196 (486)
102 TIGR01886 dipeptidase dipeptid 76.4 3.4 7.4E-05 43.5 4.6 52 185-239 107-159 (466)
103 PRK13013 succinyl-diaminopimel 75.8 3.8 8.3E-05 42.1 4.8 50 185-237 113-163 (427)
104 PRK07907 hypothetical protein; 75.8 4.7 0.0001 42.0 5.5 49 185-239 114-163 (449)
105 PRK06446 hypothetical protein; 75.7 3.3 7.3E-05 43.0 4.3 49 186-238 94-143 (436)
106 TIGR01246 dapE_proteo succinyl 75.1 4 8.8E-05 41.1 4.6 53 185-240 86-140 (370)
107 PRK05469 peptidase T; Provisio 73.5 5.2 0.00011 41.0 5.0 43 193-239 139-181 (408)
108 PRK13009 succinyl-diaminopimel 72.4 4.1 9E-05 41.0 4.0 48 185-235 89-137 (375)
109 PRK07079 hypothetical protein; 72.3 6 0.00013 41.5 5.2 53 185-239 117-170 (469)
110 TIGR01879 hydantase amidase, h 71.6 3.9 8.5E-05 41.9 3.6 53 190-245 82-139 (401)
111 PRK13007 succinyl-diaminopimel 70.2 6.2 0.00013 39.3 4.6 44 185-235 85-129 (352)
112 PRK06837 acetylornithine deace 69.7 5.2 0.00011 41.4 4.0 51 185-238 128-179 (427)
113 TIGR03176 AllC allantoate amid 69.5 5.3 0.00011 41.3 4.0 58 188-248 82-144 (406)
114 PLN02280 IAA-amino acid hydrol 67.0 16 0.00034 38.9 7.0 78 317-399 387-473 (478)
115 PRK13590 putative bifunctional 65.7 7.8 0.00017 42.3 4.5 59 188-249 264-327 (591)
116 PRK13365 protocatechuate 4,5-d 65.7 46 0.00099 32.8 9.5 121 269-400 45-178 (279)
117 PRK09290 allantoate amidohydro 64.4 7.8 0.00017 39.9 4.1 41 191-234 89-129 (413)
118 TIGR01900 dapE-gram_pos succin 64.4 11 0.00023 38.4 5.0 50 185-235 93-143 (373)
119 TIGR01887 dipeptidaselike dipe 63.5 8.5 0.00018 40.4 4.2 51 186-239 97-148 (447)
120 cd07950 Gallate_Doxase_N The N 63.3 35 0.00076 33.6 8.2 121 269-400 45-178 (277)
121 PRK13799 unknown domain/N-carb 62.7 9.4 0.0002 41.6 4.5 59 187-248 263-326 (591)
122 TIGR02298 HpaD_Fe 3,4-dihydrox 62.2 1.5E+02 0.0032 29.2 12.4 75 315-399 92-171 (282)
123 PRK12890 allantoate amidohydro 61.4 9 0.0002 39.4 3.9 43 190-235 89-131 (414)
124 PRK12893 allantoate amidohydro 60.9 10 0.00022 38.9 4.2 50 190-242 91-145 (412)
125 PRK13004 peptidase; Reviewed 60.8 12 0.00026 38.2 4.7 47 185-234 100-147 (399)
126 PRK10199 alkaline phosphatase 60.3 9.2 0.0002 39.0 3.6 25 2-30 98-122 (346)
127 PRK12892 allantoate amidohydro 57.0 12 0.00026 38.3 3.9 48 191-241 90-142 (412)
128 PRK07906 hypothetical protein; 56.1 14 0.00031 38.0 4.3 48 185-235 95-143 (426)
129 cd07372 2A5CPDO_B The beta sub 54.9 1.5E+02 0.0033 29.4 11.2 83 316-400 95-180 (294)
130 cd07362 HPCD_like Class III ex 54.6 2E+02 0.0043 28.1 11.8 75 315-399 88-167 (272)
131 COG2195 PepD Di- and tripeptid 54.5 10 0.00022 39.7 2.8 53 183-239 135-187 (414)
132 PRK08737 acetylornithine deace 51.5 19 0.00041 36.6 4.2 41 185-235 92-133 (364)
133 cd07370 HPCD The Class III ext 48.0 2.5E+02 0.0054 27.4 11.4 73 315-398 90-167 (280)
134 COG3655 Predicted transcriptio 47.2 16 0.00035 28.8 2.3 24 148-171 45-68 (73)
135 TIGR01887 dipeptidaselike dipe 46.5 36 0.00079 35.6 5.6 69 318-396 374-447 (447)
136 cd07371 2A5CPDO_AB The alpha a 46.2 1.6E+02 0.0034 28.7 9.6 74 316-399 84-162 (268)
137 KOG2194 Aminopeptidases of the 43.9 25 0.00055 39.7 4.0 52 189-243 158-209 (834)
138 cd05565 PTS_IIB_lactose PTS_II 40.9 66 0.0014 26.7 5.1 51 316-374 11-61 (99)
139 PLN02693 IAA-amino acid hydrol 40.5 70 0.0015 33.4 6.6 79 316-399 334-420 (437)
140 KOG2275 Aminoacylase ACY1 and 39.9 34 0.00074 35.6 3.9 53 188-243 123-176 (420)
141 cd07364 PCA_45_Dioxygenase_B S 38.5 2.7E+02 0.0057 27.4 9.9 122 269-400 45-178 (277)
142 PRK12891 allantoate amidohydro 35.9 39 0.00084 34.8 3.8 42 190-234 91-132 (414)
143 PRK13602 putative ribosomal pr 32.7 1.5E+02 0.0032 23.6 5.8 34 302-339 26-59 (82)
144 TIGR01891 amidohydrolases amid 32.0 46 0.00099 33.4 3.5 48 186-239 84-131 (363)
145 PRK10602 murein peptide amidas 31.5 3.2E+02 0.0069 26.4 8.9 71 318-400 165-235 (237)
146 cd07367 CarBb CarBb is the B s 31.4 5E+02 0.011 25.2 10.9 78 315-398 86-165 (268)
147 COG2257 Uncharacterized homolo 31.3 51 0.0011 27.1 2.9 21 319-339 31-51 (92)
148 TIGR03526 selenium_YgeY putati 29.7 67 0.0014 32.7 4.3 46 185-233 98-144 (395)
149 COG0624 ArgE Acetylornithine d 29.5 56 0.0012 33.4 3.7 51 186-239 107-158 (409)
150 COG1430 Uncharacterized conser 29.5 1.9E+02 0.004 25.3 6.3 57 19-81 16-76 (126)
151 COG0496 SurE Predicted acid ph 27.7 57 0.0012 31.8 3.1 49 349-401 105-154 (252)
152 PRK13600 putative ribosomal pr 26.3 1.3E+02 0.0029 24.3 4.5 22 318-339 40-61 (84)
153 COG5304 Uncharacterized protei 25.7 27 0.00058 28.5 0.4 22 319-340 60-81 (92)
154 cd07373 2A5CPDO_A The alpha su 24.2 4.9E+02 0.011 25.3 9.0 76 315-398 86-164 (271)
155 PRK13601 putative L7Ae-like ri 24.0 2.4E+02 0.0052 22.6 5.6 32 302-337 23-54 (82)
156 PF02643 DUF192: Uncharacteriz 23.9 1.3E+02 0.0028 25.1 4.3 36 42-81 27-62 (108)
157 TIGR00715 precor6x_red precorr 23.6 1.4E+02 0.0031 29.0 5.1 64 326-395 190-254 (256)
158 TIGR01893 aa-his-dipept aminoa 22.9 87 0.0019 33.0 3.7 30 2-31 47-76 (477)
159 PRK06683 hypothetical protein; 22.2 2.2E+02 0.0047 22.7 5.0 34 302-339 26-59 (82)
160 PF07431 DUF1512: Protein of u 21.9 6.6E+02 0.014 25.8 9.4 127 186-342 174-303 (355)
161 TIGR00789 flhB_rel flhB C-term 21.7 88 0.0019 25.1 2.7 20 320-339 27-46 (82)
162 cd07363 45_DOPA_Dioxygenase Th 21.6 3E+02 0.0066 26.4 6.9 71 316-396 77-149 (253)
163 TIGR01900 dapE-gram_pos succin 21.5 1.3E+02 0.0029 30.3 4.7 33 348-381 340-373 (373)
164 COG4882 Predicted aminopeptida 21.3 66 0.0014 33.2 2.3 21 3-28 180-200 (486)
No 1
>KOG2596 consensus Aminopeptidase I zinc metalloprotease (M18) [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-101 Score=752.81 Aligned_cols=404 Identities=62% Similarity=1.006 Sum_probs=378.3
Q ss_pred CceEEEEEeCCCCCCCCCcEEEEeecCCCceeeecCCccCCCCeeEEeEEEeCCCcccccccceeccccEEEEE-CCCCc
Q 015250 1 MSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGYLMVNVQTYGGGLWHTWFDRDLTVAGRVIVR-GSDGS 79 (410)
Q Consensus 1 ~gslia~~~g~~~~~~~~~~mi~AH~De~g~~Vk~~~~i~~~G~~~l~~~~yGG~~~~tw~dr~L~lagrV~~~-~~~g~ 79 (410)
+++|+||.+|++|.+++||-+|+||+|+||++|||.|.....||+++.|++|||.+|+|||||+|++||||.|| .++|+
T Consensus 70 ~S~iiAFavG~ky~pgnGf~iigaHtDSpcLrlKP~Sk~s~~gylqVgV~tYGGgiw~tWfDRDLsvaGRvivk~~~~~~ 149 (479)
T KOG2596|consen 70 GSSIIAFAVGGKYVPGNGFSIIGAHTDSPCLRLKPVSKRSAEGYLQVGVETYGGGIWHTWFDRDLSVAGRVIVKEAGDGK 149 (479)
T ss_pred CceEEEEeccCcccCCCceeEEEecCCCcceeecccccccccceEEEEEeecCCccchhhccccccccceEEEEecCCcc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999 45789
Q ss_pred eEEEeeecCCCeEEecCCccccccccccCCCCCCccccceeeeeccCcccc---CCccccCCC--CCCccCChhHHHHHH
Q 015250 80 FLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETS---VEPKEKSST--SSSKVTHHPQLMQIL 154 (410)
Q Consensus 80 ~~~~l~~~~~~~gvIp~laiHl~~~~~~~~~~~~~~~~l~~diG~~~~e~~---~~~~~~~~~--~~~~~~~~~~~~~~~ 154 (410)
++++||++++|+..||+|||||+++.| ++|++|.+++|.|++|....+.+ +++++++++ .+++.+|++.|+.++
T Consensus 150 ~~~~LV~v~rPllrIPtLAiHldr~~n-~~f~pn~EtqlvPil~t~~~~~~~~~e~~~~~~~~~~~~~~~~Hhp~Ll~li 228 (479)
T KOG2596|consen 150 LIHRLVDVKRPLLRIPTLAIHLDRDVN-EGFKPNTETQLVPILGTAIPAEEEKTEKPSDDGDKPRNSSKGKHHPVLLGLI 228 (479)
T ss_pred eeeeeecCCCceeeccceeeecCCccc-ccCCCCccceeeeeecccCchhhhcCCCCCCCCccccccccccccHHHHHHH
Confidence 999999999999999999999999998 67999999999999999875322 233333333 667788999999999
Q ss_pred HHHcCCCCCCeeEEEEEEeecCCccccCCCCceEEeccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccC
Q 015250 155 SQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVG 234 (410)
Q Consensus 155 a~~~gV~~gd~v~~dl~~~~~~~~~~~G~~~~~i~gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVG 234 (410)
|+++|+++.||++|||+++|.||++++|++++||+++|||||.|||++++||..+.+. .++++++.+.++++||+||||
T Consensus 229 ak~lg~~~edIvd~eL~l~Dtq~a~lgG~~~eFiFs~RLDnl~~sF~al~aLi~s~~~-~~l~~e~~ir~valfDnEEvG 307 (479)
T KOG2596|consen 229 AKELGCTPEDIVDFELILYDTQKATLGGANDEFIFSPRLDNLLSSFCALQALIDSAEG-ESLENESGIRMVALFDNEEVG 307 (479)
T ss_pred HHHhCCCHHHhhheeeeeecCCchhhcCcccceeecccccchhhHHHHHHHHHHHhcC-CCcccCCCeEEEEeccchhhc
Confidence 9999999999999999999999999999999999999999999999999999887543 256667788899999999999
Q ss_pred cccccccCCcchHHHHHHHHHhcCCCCCChhHHHHHhhccceEEEecCCCCCCCCCccccccCCCcCCCccEEEEcCCCc
Q 015250 235 SDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQR 314 (410)
Q Consensus 235 srga~gA~~~~~p~~l~ri~~~~~~~~~~~~~~~~~~~~s~~is~Dv~~a~~P~~~~~~~~~~~~~LG~Gpvi~~~~~~~ 314 (410)
|.+||||.+.|++++|+||..+++. ....+.+++.+||+||.||+||+||||+++|+++|.|.|++|||||+++|||
T Consensus 308 S~SaQGA~s~~l~~vl~Riss~~~~---~~~~~~~ai~kSflvSADmaHa~hPNy~~kheenH~P~~h~G~vik~naNqr 384 (479)
T KOG2596|consen 308 SDSAQGAGSPFLESVLRRISSLFGS---FPTAFEEAIAKSFLVSADMAHAVHPNYSDKHEENHRPLLHGGPVIKVNANQR 384 (479)
T ss_pred chhhccCCCccHHHHHHHHHHhcCC---CchHHHHHhhhheeeehhhhhhcCCCchhhhhhccCCccCCCceEEEcCCcc
Confidence 9999999999999999999998874 5678999999999999999999999999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHH
Q 015250 315 YATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKA 394 (410)
Q Consensus 315 ~~t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~a 394 (410)
|+||....++++++|+++++|+|.++.|||++||+||||+.++++|++|+|+|+|+++|||+||||+.+|++..++|.++
T Consensus 385 yaTn~v~~~l~kevA~~~~vplQ~fvVrNdspcGsTIGPiLAS~~G~RTlDlG~pqLsMHSiRe~~gs~dv~~~~~lFk~ 464 (479)
T KOG2596|consen 385 YATNSVGSALVKEVAELAKVPLQDFVVRNDSPCGSTIGPILASKTGIRTLDLGIPQLSMHSIREMCGSKDVEQAVKLFKG 464 (479)
T ss_pred eeccchhHHHHHHHHHHcCCCceeEEEecCCCCccccchhhhhhcCceeeecCchhhhhHHHHHHhCcccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccccccccccc
Q 015250 395 FYESFSSIDKKLIVD 409 (410)
Q Consensus 395 f~~~~~~~~~~~~~~ 409 (410)
||++|..++.++.+|
T Consensus 465 Ff~~f~sv~~~~~vd 479 (479)
T KOG2596|consen 465 FFERFSSVESKLVVD 479 (479)
T ss_pred HHHHhhHHHHhhccC
Confidence 999999999988775
No 2
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=100.00 E-value=5.9e-98 Score=772.17 Aligned_cols=403 Identities=52% Similarity=0.904 Sum_probs=361.0
Q ss_pred CceEEEEEeCCCCC-CCCCcEEEEeecCCCceeeecCCccCCCCeeEEeEEEeCCCcccccccceeccccEEEEECCCCc
Q 015250 1 MSCLVAFAVGQKYS-VGNGFHIIAAHTDSPCLKLKPKSASSKSGYLMVNVQTYGGGLWHTWFDRDLTVAGRVIVRGSDGS 79 (410)
Q Consensus 1 ~gslia~~~g~~~~-~~~~~~mi~AH~De~g~~Vk~~~~i~~~G~~~l~~~~yGG~~~~tw~dr~L~lagrV~~~~~~g~ 79 (410)
+++|+||++|+++. +++|+.|++||+|||||+|||||..+++||.+|+|++|||++|+||+||||+|||||++++ +|+
T Consensus 61 ~ssl~Af~vg~~~~~~~~g~~ivgaHtDsP~lklKp~~~~~~~g~~~l~ve~YGG~l~~tW~dR~L~laGrV~~~~-~g~ 139 (465)
T PTZ00371 61 NSTIVAFTVGKKFDAPNGGFKIVGAHTDSPCLRLKPNSKVTKEGFQQVGVETYGGGLWHTWFDRDLGLAGRVVYKK-DGK 139 (465)
T ss_pred CcEEEEEEeCCCCccCCCCeEEEEEeccCCCccccCCCcccCCCEEEEeeEECCChhhccccCCCceeeeEEEEee-CCe
Confidence 45899999998754 5578999999999999999999999999999999999999999999999999999999997 588
Q ss_pred eEEEeeecCCCeEEecCCccccccccccCCCCCCccccceeeeeccCccccCCccccCCCCCCccCChhHHHHHHHHHcC
Q 015250 80 FLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELG 159 (410)
Q Consensus 80 ~~~~l~~~~~~~gvIp~laiHl~~~~~~~~~~~~~~~~l~~diG~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g 159 (410)
++++||+.++|+++||+|||||+++.+++++++|+++||.|++|....++..+ ++...+.+.+|+..|++++|+++|
T Consensus 140 ~~~~lv~~~~pv~~IP~LaiHl~r~~n~~~~~~n~~~~l~pi~~~~~~~~~~~---~~~~~~~~~~~~~~ll~~la~~~g 216 (465)
T PTZ00371 140 LEEKLIRINKPILRIPNLAIHLQTSTERESFKPNKENHLKPIISTEVYEQLNG---KQDNDNSNNNHSAPLLKLIAKELG 216 (465)
T ss_pred EEEEEEeCCCCeEECCchhhhcCccccccCCCcCccCcceeEEecCccccccc---ccccccccccchHHHHHHHHHHcC
Confidence 99999999999999999999999998744789999999999998765321000 000111234677889999999999
Q ss_pred CCCCCeeEEEEEEeecCCccccCCCCceEEeccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccc
Q 015250 160 CGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239 (410)
Q Consensus 160 V~~gd~v~~dl~~~~~~~~~~~G~~~~~i~gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~ 239 (410)
|++||+++||++++|.++++++|++++||.|+|||||+|||++++||+++++..++ .+..+.++++||||||||+|++
T Consensus 217 v~~~Div~~dL~l~d~~~~~~~G~~~e~i~s~rlDnr~~~~~~l~al~~~~~~~~~--~~~~~~v~~~~d~EEVGs~ga~ 294 (465)
T PTZ00371 217 CSVEDIVDFDLCLMDTQPSCFGGLNEEFISSPRLDNLGSSFCAFKALTEAVESLGE--NSSNIRMVCLFDHEEVGSSSSQ 294 (465)
T ss_pred CCCCceEEEEEEeecCCcceEeecCCCeEEEecchhHHHHHHHHHHHHhccccccC--CCCceEEEEEECCcCCCCCcch
Confidence 99999999999999999999999999999999999999999999999987531000 0233556677999999999999
Q ss_pred ccCCcchHHHHHHHHHhcCCCCC-ChhHHHHHhhccceEEEecCCCCCCCCCccccccCCCcCCCccEEEEcCCCccccC
Q 015250 240 GAGAPTMFQAIRRIVGSLAHEHV-SETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATS 318 (410)
Q Consensus 240 gA~~~~~p~~l~ri~~~~~~~~~-~~~~~~~~~~~s~~is~Dv~~a~~P~~~~~~~~~~~~~LG~Gpvi~~~~~~~~~t~ 318 (410)
||++.|+|++|+||..+++.... +++.+.+++++|++||+|++||.||||+++++++|.++||+||+||++.+++|++|
T Consensus 295 GA~s~~l~d~l~ri~~~~~~~~~~~~~~~~~~~~~S~~IS~DvahA~hPn~~~~~d~~~~~~lg~GpvIk~~a~~~y~td 374 (465)
T PTZ00371 295 GAGSSLLPDTIERILSSLSASNNSSDDSFAKLMARSFLLSVDMAHAVHPNYPEKHQANHRPKFHEGIVIKYNANQRYATN 374 (465)
T ss_pred hccccccHHHHHHHHHhhccccccchhHHHHHHhccEEEEEecccccCCCCccccCCcCceeCCCCcEEEEeCCCCcccC
Confidence 99999999999999998875211 26789999999999999999999999999999999999999999999989999999
Q ss_pred HHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHHHHhh
Q 015250 319 GVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYES 398 (410)
Q Consensus 319 ~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af~~~ 398 (410)
+.+.+.++++|+++|||||+++.++|++||||+|++++++.||||+|||+|+|||||+|||++++|++++++|+++|+++
T Consensus 375 ~~~~a~i~~la~~~~Ip~Q~~~~~~d~~~GsTig~i~~s~~Gi~tvDiGiP~l~MHS~rE~~~~~D~~~~~~l~~af~~~ 454 (465)
T PTZ00371 375 GVTASLLKAIAKKANIPIQEFVVKNDSPCGSTIGPILSSNLGIRTVDIGIPQLAMHSIREMCGVVDIYYLVKLIKAFFTN 454 (465)
T ss_pred HHHHHHHHHHHHHcCCCEEEEEecCCCCCcchHHHHHHhCCCCcEEEechhhcccccHHHHccHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccc
Q 015250 399 FSSIDKKLIVD 409 (410)
Q Consensus 399 ~~~~~~~~~~~ 409 (410)
|.+++.++.++
T Consensus 455 ~~~~~~~~~~~ 465 (465)
T PTZ00371 455 YSKVDGSSLLD 465 (465)
T ss_pred hhhhcceEeeC
Confidence 99998887664
No 3
>PRK02813 putative aminopeptidase 2; Provisional
Probab=100.00 E-value=2.6e-95 Score=746.23 Aligned_cols=368 Identities=48% Similarity=0.792 Sum_probs=344.9
Q ss_pred CceEEEEEeCCCCCCCCCcEEEEeecCCCceeeecCCccCCCCeeEEeEEEeCCCcccccccceeccccEEEEECCCCce
Q 015250 1 MSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGYLMVNVQTYGGGLWHTWFDRDLTVAGRVIVRGSDGSF 80 (410)
Q Consensus 1 ~gslia~~~g~~~~~~~~~~mi~AH~De~g~~Vk~~~~i~~~G~~~l~~~~yGG~~~~tw~dr~L~lagrV~~~~~~g~~ 80 (410)
+++|+||++|+++.+.+|++|++||+|||||+|||||.++++||++|+|++|||++|+||+||+|++||||++++++ ++
T Consensus 60 ~~sliAf~vg~~~~~~~g~~iv~aH~DsP~l~lKp~~~~~~~g~~~l~ve~YGG~~~~tW~Dr~L~laGrV~~~~~~-~~ 138 (428)
T PRK02813 60 GSSLIAFRVGEGAPAETGFRIVGAHTDSPGLRVKPNPDTGEAGYLQLNVEVYGGPILNTWLDRDLSLAGRVVLRDGN-KP 138 (428)
T ss_pred CcEEEEEEeCCCCccCCCeEEEEEeccCCCeeeccCCcccCCCEEEEeeEECCCchhccccCCCcccceEEEEecCC-Ee
Confidence 45999999998755447899999999999999999999999999999999999999999999999999999999864 89
Q ss_pred EEEeeecCCCeEEecCCccccccccccCCCCCCccccceeeeeccCccccCCccccCCCCCCccCChhHHHHHHHHHcCC
Q 015250 81 LHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGC 160 (410)
Q Consensus 81 ~~~l~~~~~~~gvIp~laiHl~~~~~~~~~~~~~~~~l~~diG~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~gV 160 (410)
+.+|++.++|+++||+|||||+++.+ +++++|++.+|.|+++... ..++..|++++++++||
T Consensus 139 ~~~l~~~~~pv~~Ip~LaiHL~~~~~-~g~~~n~~~~~~Pi~~~~~-----------------~~~~~~~l~~la~~~gi 200 (428)
T PRK02813 139 ESRLVNIDRPILRIPNLAIHLNREVN-EGLKLNPQKHLLPILLNGV-----------------GEKEGDFLELLAEELGV 200 (428)
T ss_pred EEEEEeCCCCeEEeCcchhccCcccc-cccCcccccCCcceecccc-----------------cccchHHHHHHHHHcCC
Confidence 99999999999999999999999987 6789999999999974311 12346799999999999
Q ss_pred CCCCeeEEEEEEeecCCccccCCCCceEEeccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCcccccc
Q 015250 161 GTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQG 240 (410)
Q Consensus 161 ~~gd~v~~dl~~~~~~~~~~~G~~~~~i~gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~g 240 (410)
++||+++||++|+|.+|++++|++++||.|+|||||+|||++++||+++++ +.+.++++||||||||||++|
T Consensus 201 ~~~Div~~dl~~~d~~~~~~~G~~~e~i~s~~lDnr~~~~~~l~al~~~~~--------~~~~~~~~~d~EEVGs~~~~G 272 (428)
T PRK02813 201 DADDILDFDLFLYDTQPGALIGANGEFISSGRLDNLSSCHAGLEALLAAAS--------DATNVLAAFDHEEVGSATKQG 272 (428)
T ss_pred CcCCEEEEEEEEEEcccceeeccCCCEEEEecchhHHHHHHHHHHHHhcCC--------CCeEEEEEEecCccCCCCCcc
Confidence 999999999999999999999999999999999999999999999988741 346889999999999999999
Q ss_pred cCCcchHHHHHHHHHhcCCCCCChhHHHHHhhccceEEEecCCCCCCCCCccccccCCCcCCCccEEEEcCCCccccCHH
Q 015250 241 AGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGV 320 (410)
Q Consensus 241 A~~~~~p~~l~ri~~~~~~~~~~~~~~~~~~~~s~~is~Dv~~a~~P~~~~~~~~~~~~~LG~Gpvi~~~~~~~~~t~~~ 320 (410)
|.+.|++++|+||..+++. +++.++++++||++||+|++||.||||++++++.|.++||+||+||++.+++|++|+.
T Consensus 273 A~s~~l~~~l~ri~~~~~~---~~~~~~~~i~~s~~IS~DvahA~hPn~~~~~~~~~~~~lg~GpvIk~~~~~~y~t~~~ 349 (428)
T PRK02813 273 ADSPFLEDVLERIVLALGG---DREDFLRALARSFLISADMAHAVHPNYPEKHDPTHRPLLNKGPVIKINANQRYATDAE 349 (428)
T ss_pred cCchhHHHHHHHHHHhhcC---chHHHHHhhCCCeEEEEeccCCCCCCCCCccCcccCccCCcCCeEEECCCCCcccCHH
Confidence 9999999999999998875 7788999999999999999999999999999999999999999999998999999999
Q ss_pred HHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHHHHhh
Q 015250 321 TAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYES 398 (410)
Q Consensus 321 ~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af~~~ 398 (410)
+.+.++++|++++||||+++.++|++||||+|++++++.||||+|||+|+|||||++||++++|++++++|+++|++.
T Consensus 350 ~~a~~~~ia~~~~Ip~Q~~v~~~d~~gGstig~i~~s~~Gi~tvdiGiP~l~MHS~~E~~~~~D~~~~~~l~~~f~~~ 427 (428)
T PRK02813 350 SAAVFKLLCEKAGVPYQEFVNRSDMPCGSTIGPITAARLGIRTVDVGAPMLAMHSARELAGVKDHAYLIKALTAFFSG 427 (428)
T ss_pred HHHHHHHHHHHcCCCEEEEEecCCCCCccHHHHHHHhCCCCcEEEeChhhcccccHHHHccHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999874
No 4
>PF02127 Peptidase_M18: Aminopeptidase I zinc metalloprotease (M18); InterPro: IPR001948 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M18, (clan MH). The proteins have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal aminoacid, usually neutral or hydrophobic, from a polypeptide []. The type example is aminopeptidase I from Saccharomyces cerevisiae (Baker's yeast), the sequence of which has been deduced, and the mature protein shown to consist of 469 amino acids []. A 45-residue presequence contains both positively- and negatively-charged and hydrophobic residues, which could be arranged in an N-terminal amphiphilic alpha-helix []. The presequence differs from signal sequences that direct proteins across bacterial plasma membranes and endoplasmic reticulum or into mitochondria. It is unclear how this unique presequence targets aminopeptidase I to yeast vacuoles, and how this sorting utilises classical protein secretory pathways [].; GO: 0004177 aminopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1Y7E_A 2GLJ_R 4DYO_A 2IJZ_B 3VAT_A 3VAR_A 2GLF_B.
Probab=100.00 E-value=3.9e-96 Score=750.66 Aligned_cols=385 Identities=51% Similarity=0.852 Sum_probs=325.3
Q ss_pred CceEEEEEeCCCCCCCCCcEEEEeecCCCceeeecCCccCCCCeeEEeEEEeCCCcccccccceeccccEEEEECC-CCc
Q 015250 1 MSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGYLMVNVQTYGGGLWHTWFDRDLTVAGRVIVRGS-DGS 79 (410)
Q Consensus 1 ~gslia~~~g~~~~~~~~~~mi~AH~De~g~~Vk~~~~i~~~G~~~l~~~~yGG~~~~tw~dr~L~lagrV~~~~~-~g~ 79 (410)
+++|+||.+|+++++.+|+.|++||+|+|||+|||+|+++++||.+|+|++|||++|+||+||+|+|||||+++++ .++
T Consensus 47 ~ssliAF~vg~~~~~~~G~~ivgaHtDSP~lklKp~~~~~~~g~~~l~ve~YGG~i~~tW~DR~L~laGrV~~k~~~~~~ 126 (432)
T PF02127_consen 47 GSSLIAFAVGGKFPPGNGFRIVGAHTDSPCLKLKPNPEYESDGYAQLNVEVYGGGIWHTWFDRPLSLAGRVVVKDGDEGK 126 (432)
T ss_dssp TTEEEEEEEETTS-GCG-EEEEEEE---SEEEEEEEEEEEETTEEEEEEEEESS--GGGGTTS-EEEEEEEEETTTTTEE
T ss_pred CCEEEEEEeCCcCCcccceEEEEEecCCCCeeecCCCccccCCEEEEeeEcCCCcccccccCCccceeEEEEEeeCCCCc
Confidence 4579999999987777899999999999999999999999999999999999999999999999999999999987 578
Q ss_pred eEEEeeecCCCeEEecCCccccccccccCCCCCCccccceeeeeccCccccCCccccCCCCCCccCChhHHHHHHHHHcC
Q 015250 80 FLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELG 159 (410)
Q Consensus 80 ~~~~l~~~~~~~gvIp~laiHl~~~~~~~~~~~~~~~~l~~diG~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g 159 (410)
++++|+++++|+++||+|||||+++.+ +++++|++.||.|+++...... .++++++ .+++|+..|++++++++|
T Consensus 127 ~~~~lv~~~~pv~~IP~LAiHL~r~~n-~~~~~n~q~~l~pi~~~~~~~~--~~~~~~~---~~~~~~~~ll~~la~~~g 200 (432)
T PF02127_consen 127 PESKLVDIDRPVAIIPNLAIHLDREVN-EGFKLNKQKHLEPILGLSGESS--LPEDDEE---DKNRHKPSLLKLLAEELG 200 (432)
T ss_dssp EEEESCSTTS-BBBSS---GGGSTTTT-TS-CTTTSTTSGGEEEECCHHH--HHTTTSS---SSSHHHHHHHHHHHHHHT
T ss_pred eeEEEEeCCCCEEEeCCchhccccccc-ccCCccccccccCeEeeccccc--ccccccc---cccchhHHHHHHHHHHhC
Confidence 899999999999999999999999876 4579999999999999976110 0000110 135688999999999999
Q ss_pred CCCCCeeEEEEEEeecCCccccCCCCceEEeccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccc
Q 015250 160 CGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239 (410)
Q Consensus 160 V~~gd~v~~dl~~~~~~~~~~~G~~~~~i~gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~ 239 (410)
|+++||++|||+++|.||++++|++++||.|+|||||+|||++++||.+..+. .+.+.+.+.++++||+|||||.+.+
T Consensus 201 i~~~dIl~~DL~l~d~~~~~~~G~~~efI~s~rlDnl~s~~a~l~Al~~~~~~--~~~~~~~~~v~~~fD~EEiGS~s~~ 278 (432)
T PF02127_consen 201 IEEEDILDFDLYLYDAQPARIVGLDEEFISSPRLDNLASCYAALEALIDSSND--SLEPEDGTNVVVLFDNEEIGSESRQ 278 (432)
T ss_dssp --GGGCCCEEEEEEEES--EEETTTTSEEEETTHHHHHHHHHHHHHHHHHTSS--CCCCSSSEEEEEEESSGGGTSTSTT
T ss_pred CCHHHhccceEEEEecCCCeEecCchhhhhccCcCcHHHHHHHHHHHHhhhcc--cccccCceEEEEEEcccccCCCccc
Confidence 99999999999999999999999999999999999999999999999988532 1222356789999999999999999
Q ss_pred ccCCcchHHHHHHHHHhcCCCCCChhHHHHHhhccceEEEecCCCCCCCCCccccccCCCcCCCccEEEEcCCCccccCH
Q 015250 240 GAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSG 319 (410)
Q Consensus 240 gA~~~~~p~~l~ri~~~~~~~~~~~~~~~~~~~~s~~is~Dv~~a~~P~~~~~~~~~~~~~LG~Gpvi~~~~~~~~~t~~ 319 (410)
||.|.|++++|+||..+++. +.+.+++++++|++||+|++||.||||+++|+++|.+.||+||+||++.+++|+||.
T Consensus 279 GA~S~fl~~~l~ri~~~~~~---~~~~~~~~l~~S~~lSaD~aHa~HPny~~~~d~~~~p~l~~G~viK~~a~q~yatd~ 355 (432)
T PF02127_consen 279 GADSPFLEDVLERILAALGG---SREFYRRILANSFLLSADVAHAVHPNYPEKHDPNNQPLLNKGPVIKKNANQRYATDA 355 (432)
T ss_dssp STTSTHHHHHHHHHHHHCST---TTHHHHHHHHC-EEEEE--EEB-BTTSGGGS-TTTSBSTTS-EEEESETTTTSSS-H
T ss_pred cccchHHHHHHHHHHHhcCC---CHHHHHHHhhcCcEECcCcccccCCCcchhccccCCCcCCcccEEEEeCCCCcccCH
Confidence 99999999999999999975 557788889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHHHH
Q 015250 320 VTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFY 396 (410)
Q Consensus 320 ~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af~ 396 (410)
...+.++++|++++||||.+++|+|++||||+||+.+++.||+|+|||+|+++|||+|||++.+|++++++++++||
T Consensus 356 ~~~a~~~~i~~~~~ip~Q~f~~r~d~~~GsTiGpi~sa~~gi~tvDiG~P~LsMHS~rE~~g~~D~~~~~~~~~aFf 432 (432)
T PF02127_consen 356 ASAAVFREICEKAGIPWQEFVNRSDDPGGSTIGPILSARLGIRTVDIGIPQLSMHSIRETAGKKDIYYLYKAFKAFF 432 (432)
T ss_dssp HHHHHHHHHHHHHH--EEEEESSSTSSS--HHHHHHHHCCTSEEEEEE-EEESTTSSSEEEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCCeEEEEecCCCCCCccHHHHHHHhcCCCEEEechhhhhcccHHHHhccccHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999996
No 5
>COG1362 LAP4 Aspartyl aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.6e-95 Score=720.66 Aligned_cols=374 Identities=44% Similarity=0.748 Sum_probs=354.4
Q ss_pred CceEEEEEeCCCCCCCCCcEEEEeecCCCceeeecCCccCCCCeeEEeEEEeCCCcccccccceeccccEEEEECCCCce
Q 015250 1 MSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGYLMVNVQTYGGGLWHTWFDRDLTVAGRVIVRGSDGSF 80 (410)
Q Consensus 1 ~gslia~~~g~~~~~~~~~~mi~AH~De~g~~Vk~~~~i~~~G~~~l~~~~yGG~~~~tw~dr~L~lagrV~~~~~~g~~ 80 (410)
|++|+||.+|++|.+.+||.|++||+|||+|++||+|++..+||+++.+++|||++.++|+||+|+|+|||.++++.+++
T Consensus 62 gssliAf~ig~~~~~~~gf~IigaHtDSP~l~lKp~p~~~~~g~~~~~~e~YGG~~~~~WldrdLsiaGrv~~k~~~~~~ 141 (437)
T COG1362 62 GSSLIAFIIGKKWKLESGFRIIGAHTDSPRLRLKPNPDIEVEGYLQLGTEVYGGIILYTWLDRDLSIAGRVFVKDGTGKI 141 (437)
T ss_pred CceEEEEEecCCCCCCCCeEEEEeecCCCCcccCCCchhhhcceeEEeeEecCCeeecceecCccceeeEEEEecCCCcc
Confidence 45999999999987888999999999999999999999999999999999999999999999999999999999666688
Q ss_pred EEEeeecCCCeEEecCCccccccccccCCCCCCccccceeeeeccCccccCCccccCCCCCCccCChhHHHHHHHHHcCC
Q 015250 81 LHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGC 160 (410)
Q Consensus 81 ~~~l~~~~~~~gvIp~laiHl~~~~~~~~~~~~~~~~l~~diG~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~gV 160 (410)
++++++.++|+++||+|||||+++.+ +++++|+++|+.|++|..+.++ +++|+..+++++++++||
T Consensus 142 ~~~lv~~~~Pi~~IP~LaiHL~r~~n-~~~~~n~~~~l~piig~~~~~~-------------~~~~~~~ll~~iae~~~v 207 (437)
T COG1362 142 ISRLVDIDDPILRIPDLAIHLDRDVN-KSFEINPQENLNPIIGVIPGEE-------------KNKVKASLLKLLAEQLGV 207 (437)
T ss_pred eeeeccCCCCeeecCcchhhcCcchh-ccCccCccccceeeEeccCccc-------------ccchhHHHHHHHHHHhCC
Confidence 99999999999999999999999987 5689999999999999986321 234788999999999999
Q ss_pred CCCCeeEEEEEEeecCCccccCCCCceEEeccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCcccccc
Q 015250 161 GTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQG 240 (410)
Q Consensus 161 ~~gd~v~~dl~~~~~~~~~~~G~~~~~i~gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~g 240 (410)
++.|++++||.++|+|+++++|++++||+++|||||+|||+.++||..+++ .+.+.++++||+|||||.|++|
T Consensus 208 ~~ed~vs~dL~~~~~~~a~~~G~~~efi~a~rlDn~~~~~a~m~AL~~~~~-------~~~~~v~~~fD~EEIGS~s~~G 280 (437)
T COG1362 208 EEEDFVSFDLILVDAQKARLVGADGEFLSAPRLDNLICCHAGMEALLAAAN-------SDKTCVLALFDHEEIGSLSAQG 280 (437)
T ss_pred cHhhhhhceEEEecCCcceeeccchhhhccCCccchHHHHHHHHHHHhccC-------CCCceEEEEechhhcccccccC
Confidence 999999999999999999999999999999999999999999999998743 3556888999999999999999
Q ss_pred cCCcchHHHHHHHHHhcCCCCCChhHHHHHhhccceEEEecCCCCCCCCCccccccCCCcCCCccEEEEcCCCccccCHH
Q 015250 241 AGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGV 320 (410)
Q Consensus 241 A~~~~~p~~l~ri~~~~~~~~~~~~~~~~~~~~s~~is~Dv~~a~~P~~~~~~~~~~~~~LG~Gpvi~~~~~~~~~t~~~ 320 (410)
|.++|++++|+||..+++. +++++.+++.+|+.||.|++||.|||||++|+++|.+.||+|||||.++|+||+||..
T Consensus 281 Ads~fL~~vLeri~~a~~~---~~~~~~~~l~nS~~iSaD~ahaihPny~~~hd~~n~p~ln~G~vik~~an~ry~td~~ 357 (437)
T COG1362 281 ADSPFLENVLERIILALGG---SRDDHLRALANSFLISADVAHAIHPNYPEKHDPNNAPKLNKGPVIKVNANQRYATDSE 357 (437)
T ss_pred cCchhHHHHHHHHHHHccC---ChHHHHHHHhhceeeehhhHhhcCCCCccccCcccCCccCCCceEEecCCCCcccCch
Confidence 9999999999999999986 6677778999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHHHHhh
Q 015250 321 TAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYES 398 (410)
Q Consensus 321 ~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af~~~ 398 (410)
..+.++++|+++|||||.++.|+|.+||||+||+..+++||+|+|||+|+++|||+||+++.+|++.+++++.+||++
T Consensus 358 ~~a~~~~l~~~~~Vp~Q~f~~~~d~~~Gstigpi~aa~tGi~tIDiG~~~LsMHS~rE~~g~~D~~~~~~~~~aFf~~ 435 (437)
T COG1362 358 GIALLRKLAQKAGVPWQVFVLRNDVPCGSTIGPILAARTGIRTIDIGPALLSMHSIRELSGSADLYEAYKALSAFFEN 435 (437)
T ss_pred HHHHHHHHHHHcCCceEEEEecccCCCCcccchhHHhhcCCceeecchhhhhhccHHHHcchhHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999986
No 6
>PRK02256 putative aminopeptidase 1; Provisional
Probab=100.00 E-value=8.2e-94 Score=738.20 Aligned_cols=376 Identities=24% Similarity=0.371 Sum_probs=340.8
Q ss_pred CceEEEEEeCCCCCCCCCcEEEEeecCCCceeeecCCccCCCCeeEEeEEEeCCCcccccccceeccccEEEEECCCCce
Q 015250 1 MSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGYLMVNVQTYGGGLWHTWFDRDLTVAGRVIVRGSDGSF 80 (410)
Q Consensus 1 ~gslia~~~g~~~~~~~~~~mi~AH~De~g~~Vk~~~~i~~~G~~~l~~~~yGG~~~~tw~dr~L~lagrV~~~~~~g~~ 80 (410)
+++|+||++|+++ .++|+.|++||+|+|||+|||||+.+++||.+|+|++|||++|+|||||+|+|||||+++++. ++
T Consensus 78 ~ssliAf~ig~~~-~~~g~~iv~aHtDsP~lklKP~~~~~~~g~~~l~ve~YGG~l~~tW~DRdL~lAGrV~~~~~~-~~ 155 (462)
T PRK02256 78 GKSVALAVIGKEP-LEEGLNIIGAHIDSPRLDLKPNPLYEDEGLALLKTHYYGGIKKYQWVAIPLALHGVVVKKDGT-KV 155 (462)
T ss_pred CCEEEEEEeCCCC-CCCceEEEEEecCCCCceecCCCccccCCeeEeCeEecCCcccccccCCCceeeeEEEEecCC-EE
Confidence 4589999999873 457899999999999999999999999999999999999999999999999999999999732 46
Q ss_pred EEEe-eecCCCeEEecCCcccccccccc-CCCCCCccccceeeeeccCccccCCccccCCCCCCccCChhHHHHHHHHHc
Q 015250 81 LHKL-VKVKRPLLRVPTLAIHLDRTVNK-DGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQEL 158 (410)
Q Consensus 81 ~~~l-~~~~~~~gvIp~laiHl~~~~~~-~~~~~~~~~~l~~diG~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 158 (410)
+.++ ++.++|+++||+|||||+++.++ +++++|+++||.|++|..+.+. ++ ..+|+..|++++|+++
T Consensus 156 ~~~l~~~~~~pi~~IP~LAiHl~r~~n~~~~~~~n~q~~l~pi~~~~~~~~-------~~----~~~~~~~ll~~la~~~ 224 (462)
T PRK02256 156 EIVIGEDENDPVFTISDLLPHLAKDQMEKKASEAIEGEKLNILIGSIPLED-------EE----KEKVKLNILKLLNEKY 224 (462)
T ss_pred EEEecccCCCCeEEcCchhhhhCchhhhccccccCccCCcceeeccCCccc-------cc----cccchHHHHHHHHHHh
Confidence 6777 78999999999999999998752 3578999999999999764221 00 1246678999999999
Q ss_pred CCCCCCeeEEEEEEeecCCccccCCCCceEEeccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCcccc
Q 015250 159 GCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSY 238 (410)
Q Consensus 159 gV~~gd~v~~dl~~~~~~~~~~~G~~~~~i~gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga 238 (410)
||++.||++|||+++|.||++++|++++||+|+|||||+|||+++++|+++.+ .+.+.++++||||||||||+
T Consensus 225 ~v~~~dI~~~DL~l~d~q~~~~~G~~~efI~s~rLDNr~~~~~~leal~~~~~-------~~~~~~~~~~dqEEVGs~ga 297 (462)
T PRK02256 225 GITEEDFVSAELEVVPAGKARDVGLDRSLIGAYGQDDRVCAYTSLEALLELEN-------PEKTAVVLLVDKEEIGSEGN 297 (462)
T ss_pred CCCHHHeeeceEEEecCCCcceeccccceeeccccccHHHHHHHHHHHHhccc-------CCCeEEEEEEcccccCCcch
Confidence 99999999999999999999999999999999999999999999999987742 24578899999999999999
Q ss_pred cccCCcchHHHHHHHHHhcCCCCCChhHHHHHhhccceEEEecCCCCCCCCCccccccCCCcCCCccEEE-E-cCCCccc
Q 015250 239 QGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIK-H-NANQRYA 316 (410)
Q Consensus 239 ~gA~~~~~p~~l~ri~~~~~~~~~~~~~~~~~~~~s~~is~Dv~~a~~P~~~~~~~~~~~~~LG~Gpvi~-~-~~~~~~~ 316 (410)
+||++.|++++|+||..+++. .++++.+.+++++|++||+|++||.|||||++++++|.+.||+||+|+ + +++++|+
T Consensus 298 ~gA~s~~l~~~l~Ri~~~~~p-d~~~~~~~~~~~~S~~IS~Dvaha~hPn~~~~~~~~~~~~Lg~GpvIk~~d~~~~~y~ 376 (462)
T PRK02256 298 TGAQSRFFENFVAELLAKTEG-NYSDLKLRRALANSKALSADVSAAFDPNYPSVHEKQNAAYLGYGVVFTKYTGSRGKYG 376 (462)
T ss_pred hhhcchhHHHHHHHHHHhcCC-CcchHHHHHHHhccEEEEEeCCCCCCCCCCcccCcccCccCCCCcEEEEEcCCCCccc
Confidence 999999999999999987763 135788999999999999999999999999999999999999999996 6 4899998
Q ss_pred c---CHHHHHHHHHHHHHCCCCEeEE-EeecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHH
Q 015250 317 T---SGVTAFLFKEIAKLHNLPTQEF-VVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHF 392 (410)
Q Consensus 317 t---~~~~~~~l~~~A~~~~Ip~Q~~-~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll 392 (410)
+ |+.+.++++++|+++|||||++ +.|+|++||||+|++.+ +.||||+|||||+|||||+|||++++|++++++|+
T Consensus 377 t~~~~~~~~~~i~~iA~~~~Ip~Q~~~~~r~d~~~GgTig~~~s-~~Gi~tvdiGiP~l~MHS~rE~~~~~D~~~~~~ll 455 (462)
T PRK02256 377 ANDANAEFVAEVRNLFNKNNVVWQTAELGKVDQGGGGTIAKFLA-NYGMEVIDCGVALLSMHSPFEIASKADIYETYKAY 455 (462)
T ss_pred ccCCCHHHHHHHHHHHHHcCCCEEEEEeecCCCCCcChHHHHHc-CCCCcEEEechhhhccccHHHHhhHHHHHHHHHHH
Confidence 8 9999999999999999999995 66999999999998887 99999999999999999999999999999999999
Q ss_pred HHHHhh
Q 015250 393 KAFYES 398 (410)
Q Consensus 393 ~af~~~ 398 (410)
++|+++
T Consensus 456 ~~f~~~ 461 (462)
T PRK02256 456 KAFLEE 461 (462)
T ss_pred HHHHhh
Confidence 999974
No 7
>PRK09864 putative peptidase; Provisional
Probab=100.00 E-value=1.3e-67 Score=528.80 Aligned_cols=300 Identities=18% Similarity=0.184 Sum_probs=259.6
Q ss_pred ceEEEEEeCCCCCCCCCcEEEEeecCCCceeeecCCccCCCCeeEEeEEEeCCCcccccccceeccccEEEEECCCCc-e
Q 015250 2 SCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGYLMVNVQTYGGGLWHTWFDRDLTVAGRVIVRGSDGS-F 80 (410)
Q Consensus 2 gslia~~~g~~~~~~~~~~mi~AH~De~g~~Vk~~~~i~~~G~~~l~~~~yGG~~~~tw~dr~L~lagrV~~~~~~g~-~ 80 (410)
||++|.. |.. .+.+|++|||||+||||+. |+++||| +|.++|| |+++.| ++++|.+++.+|. +
T Consensus 43 GNli~~~-g~~----~~kvml~AHmDevG~mV~~---I~~~G~l--~~~~lGG-----~~~~~l-~~q~V~i~t~~g~~v 106 (356)
T PRK09864 43 GSFVARK-GNK----GPKVAVVGHMDEVGFMVTH---IDESGFL--RFTTIGG-----WWNQSM-LNHRVTIRTHKGVKI 106 (356)
T ss_pred CCEEEEe-CCC----CcEEEEEecccccCEEEEE---ECCCCeE--EEEeCCC-----cCcccc-CCCEEEEEeCCCCEE
Confidence 7999875 522 2369999999999999999 9999995 5899999 666666 8999999987663 3
Q ss_pred EEEeeecCCCeEEecCCccccccccccCCCCCCccccceeeeeccCccccCCccccCCCCCCccCChhHHHHHHHHHcCC
Q 015250 81 LHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGC 160 (410)
Q Consensus 81 ~~~l~~~~~~~gvIp~laiHl~~~~~~~~~~~~~~~~l~~diG~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~gV 160 (410)
.|+|+.+|||+.++++++ +..+.++|++|+|+.|+| +++++||
T Consensus 107 ----------~GVig~~~~H~~~~~~~~--k~~~~~~l~IDiGa~s~e-------------------------e~~~~GV 149 (356)
T PRK09864 107 ----------PGVIGSVAPHALTEKQKQ--QPLSFDEMFIDIGANSRE-------------------------EVEKRGV 149 (356)
T ss_pred ----------EEEEeCCccccCChhHcc--cCCChhHEEEEeCCCCHH-------------------------HHHhcCC
Confidence 699999999999877654 678899999999999876 7889999
Q ss_pred CCCCeeEEEEEEeecCCccccCCCCceEEeccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCcccccc
Q 015250 161 GTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQG 240 (410)
Q Consensus 161 ~~gd~v~~dl~~~~~~~~~~~G~~~~~i~gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~g 240 (410)
++||+++||..|... +++++.||+||||+|||+++++++++++ .+...|++||+|||||+|||++
T Consensus 150 ~vGD~v~~~~~~~~l--------~~~~i~~kalDnR~g~~~lle~l~~l~~-------~~~~vy~v~TvQEEvGlrGA~~ 214 (356)
T PRK09864 150 EIGDFISPEANFACW--------GEDKVVGKALDNRIGCAMMAELLQTVNN-------PEITLYGVGSVEEEVGLRGAQT 214 (356)
T ss_pred CCCCEEEECCCcEEE--------cCCEEEEEeCccHHHHHHHHHHHHHhhc-------CCCeEEEEEEcchhcchHHHHH
Confidence 999999999998653 5678999999999999999999998852 2456899999999999999999
Q ss_pred cCCcchHHHHHHHHHhcCCCCCChhHHHHHhhccceEEEecCCCCCCCCCccccccCCCcCCCccEEEEcCCCccccCHH
Q 015250 241 AGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGV 320 (410)
Q Consensus 241 A~~~~~p~~l~ri~~~~~~~~~~~~~~~~~~~~s~~is~Dv~~a~~P~~~~~~~~~~~~~LG~Gpvi~~~~~~~~~t~~~ 320 (410)
|++.+ +||++|++|++++.|. |+.....+..+||+||+|+.+|++ ++.|+.
T Consensus 215 aa~~i--------------------------~PDiaIavDvt~~~d~--p~~~~~~~~~~lG~Gp~i~~~D~~-~i~~~~ 265 (356)
T PRK09864 215 SAEHI--------------------------KPDVVIVLDTAVAGDV--PGIDNIKYPLKLGQGPGLMLFDKR-YFPNQK 265 (356)
T ss_pred HHhcC--------------------------CCCEEEEEecccCCCC--CCCcccccccccCCCCeEEEccCC-ccCCHH
Confidence 99886 5589999999999873 332222335789999999999886 899999
Q ss_pred HHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHHHHhhcc
Q 015250 321 TAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFS 400 (410)
Q Consensus 321 ~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af~~~~~ 400 (410)
+.++++++|+++|||||+.+.. .+|++++.+|.++.||||+.||||+||||||.||++++|++++++|+.+|++++.
T Consensus 266 l~~~l~~~A~~~~Ip~Q~~~~~---~ggTDa~~i~~~~~Gvpt~~isiP~RY~Hs~~e~~~~~D~e~~~~Ll~~~~~~l~ 342 (356)
T PRK09864 266 LVAALKSCAAHNDLPLQFSTMK---TGATDGGRYNVMGGGRPVVALCLPTRYLHANSGMISKADYDALLTLIRDFLTTLT 342 (356)
T ss_pred HHHHHHHHHHHcCCCceEEEcC---CCCchHHHHHHhCCCCcEEEEeeccCcCCCcceEeEHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999998752 3566677899999999999999999999999999999999999999999999886
Q ss_pred c
Q 015250 401 S 401 (410)
Q Consensus 401 ~ 401 (410)
+
T Consensus 343 ~ 343 (356)
T PRK09864 343 A 343 (356)
T ss_pred h
Confidence 5
No 8
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-64 Score=502.88 Aligned_cols=304 Identities=22% Similarity=0.226 Sum_probs=262.7
Q ss_pred ceEEEEEeCCCCCCCCCcEEEEeecCCCceeeecCCccCCCCeeEEeEEEeCCCcccccccceeccccEEEEECCCCceE
Q 015250 2 SCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGYLMVNVQTYGGGLWHTWFDRDLTVAGRVIVRGSDGSFL 81 (410)
Q Consensus 2 gslia~~~g~~~~~~~~~~mi~AH~De~g~~Vk~~~~i~~~G~~~l~~~~yGG~~~~tw~dr~L~lagrV~~~~~~g~~~ 81 (410)
|||+|.+.|++ +.+.+||+|||||+|||||. |+++|| |+|.++|||++.+ + +++||++.+++|+.
T Consensus 45 Gnlia~~~g~~---g~~~imi~AHmDEiG~mV~~---I~~~G~--Lr~~~IGG~~~~~-----~-~gq~v~i~t~~g~~- 109 (355)
T COG1363 45 GNLIAKKGGKN---GPPKVMIAAHMDEIGFMVKE---IEDDGF--LRFVPIGGWDPQV-----L-EGQRVTIHTDKGKK- 109 (355)
T ss_pred CcEEEEecCCC---CCccEEEEeecceeeeeEEE---ECCCce--EEEEEcCCcChhh-----c-cCcEEEEEeCCCcE-
Confidence 79999887732 12349999999999999999 999999 5689999954444 4 78999999888732
Q ss_pred EEeeecCCCeEEecCCcccccccc-ccCCCCCCccccceeeeeccCccccCCccccCCCCCCccCChhHHHHHHHHHcCC
Q 015250 82 HKLVKVKRPLLRVPTLAIHLDRTV-NKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGC 160 (410)
Q Consensus 82 ~~l~~~~~~~gvIp~laiHl~~~~-~~~~~~~~~~~~l~~diG~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~gV 160 (410)
..|+|++.|||+.++. +++ +..+.++|++|+|+.+++ +|+++||
T Consensus 110 --------i~GvIg~~p~H~~~~~~~~~--~~~~~~el~iDiga~ske-------------------------ea~~lGI 154 (355)
T COG1363 110 --------IRGVIGSKPPHLLKEEAERK--KPPEWDELFIDIGASSKE-------------------------EAEELGI 154 (355)
T ss_pred --------EeeeEcccCccccCcccccc--CCCchhhEEEECCcCCHH-------------------------HHHhcCC
Confidence 2699999999999755 333 557889999999999986 7999999
Q ss_pred CCCCeeEEEEEEeecCCccccCCCCceEEeccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCcccccc
Q 015250 161 GTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQG 240 (410)
Q Consensus 161 ~~gd~v~~dl~~~~~~~~~~~G~~~~~i~gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~g 240 (410)
++||+++||..+..+ ++++|.||+||||+||++++++++++++. ..+.++|++||+|||||+|||++
T Consensus 155 ~vGd~v~~~~~~~~l--------~~~~i~skalDdR~gva~lle~lk~l~~~-----~~~~~vy~v~tvqEEVGlrGA~~ 221 (355)
T COG1363 155 RVGDFVVFDPRFREL--------ANGRVVSKALDDRAGVAALLELLKELKGI-----ELPADVYFVASVQEEVGLRGAKT 221 (355)
T ss_pred CCCCEEEEcCceEEe--------cCCcEEeeeccchHhHHHHHHHHHHhccC-----CCCceEEEEEecchhhccchhhc
Confidence 999999999999875 56899999999999999999999998421 24667899999999999999999
Q ss_pred cCCcchHHHHHHHHHhcCCCCCChhHHHHHhhccceEEEecCCCCC-CCCCccccccCCCcCCCccEEEEcCCCccccCH
Q 015250 241 AGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVH-PNFSEKHEEHHRPEMQKGLVIKHNANQRYATSG 319 (410)
Q Consensus 241 A~~~~~p~~l~ri~~~~~~~~~~~~~~~~~~~~s~~is~Dv~~a~~-P~~~~~~~~~~~~~LG~Gpvi~~~~~~~~~t~~ 319 (410)
+++.+ .||++|++|++++.| |..+ ....+||+||+|...|++ +..|+
T Consensus 222 ~a~~i--------------------------~pd~aiavd~~~~~d~~~~~-----~~~~~lg~Gp~i~~~D~~-~~~~~ 269 (355)
T COG1363 222 SAFRI--------------------------KPDIAIAVDVTPAGDTPGVP-----KGDVKLGKGPVIRVKDAS-GIYHP 269 (355)
T ss_pred ccccc--------------------------CCCEEEEEecccccCCCCCc-----ccccccCCCCEEEEEcCC-CCCCH
Confidence 99886 558999999999987 4433 346799999999999887 67799
Q ss_pred HHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHHHHhhc
Q 015250 320 VTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESF 399 (410)
Q Consensus 320 ~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af~~~~ 399 (410)
.++++|+++|+++|||||.++.+ .+||+++.++.++.||||+.||+|+|||||+.|+++++|++++++||.+|++++
T Consensus 270 ~l~~~L~~~A~~~~Ip~Q~~v~~---~ggTDA~a~~~~g~gvpta~Igip~ry~Hs~~e~~~~~D~~~~~~Ll~~~i~~~ 346 (355)
T COG1363 270 KLRKFLLELAEKNNIPYQVDVSP---GGGTDAGAAHLTGGGVPTALIGIPTRYIHSPVEVAHLDDLEATVKLLVAYLESL 346 (355)
T ss_pred HHHHHHHHHHHHcCCCeEEEecC---CCCccHHHHHHcCCCCceEEEecccccccCcceeecHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999863 367778899999999999999999999999999999999999999999999998
Q ss_pred cccc
Q 015250 400 SSID 403 (410)
Q Consensus 400 ~~~~ 403 (410)
....
T Consensus 347 ~~~~ 350 (355)
T COG1363 347 DRET 350 (355)
T ss_pred chhh
Confidence 7543
No 9
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=100.00 E-value=2.3e-64 Score=505.73 Aligned_cols=301 Identities=14% Similarity=0.115 Sum_probs=256.1
Q ss_pred ceEEEEEeCCCCCCCCCcEEEEeecCCCceeeecCCccCCCCeeEEeEEEeCCCcccccccceeccccEEEEECCCCc-e
Q 015250 2 SCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGYLMVNVQTYGGGLWHTWFDRDLTVAGRVIVRGSDGS-F 80 (410)
Q Consensus 2 gslia~~~g~~~~~~~~~~mi~AH~De~g~~Vk~~~~i~~~G~~~l~~~~yGG~~~~tw~dr~L~lagrV~~~~~~g~-~ 80 (410)
||++|.+.|... +.+.+|++|||||+||||+. |+++||| ++.++|| |+++.| ++++|.+.+.+|+ +
T Consensus 41 GNvia~~~g~~~--~~~~vml~AHmDeVGf~V~~---I~~~G~l--~~~~vGG-----~~~~~l-~gq~V~i~t~~g~~i 107 (350)
T TIGR03107 41 GGIFGIKESQVE--NAPRVMVAAHMDEVGFMVSQ---IKPDGTF--RVVELGG-----WNPLVV-SSQRFTLFTRKGKKY 107 (350)
T ss_pred CCEEEEecCCCC--CCCEEEEEecccEeCEEEEE---ECCCceE--EEEeCCC-----cccccc-CCcEEEEEeCCCCEE
Confidence 799998765310 12369999999999999999 9999995 5899999 666666 8999999887764 3
Q ss_pred EEEeeecCCCeEEecCCccccccccc-cCCCCCCccccceeeeeccCccccCCccccCCCCCCccCChhHHHHHHHHHcC
Q 015250 81 LHKLVKVKRPLLRVPTLAIHLDRTVN-KDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELG 159 (410)
Q Consensus 81 ~~~l~~~~~~~gvIp~laiHl~~~~~-~~~~~~~~~~~l~~diG~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g 159 (410)
.|||+++|||+.++++ ++ +..+.++|++|+|++|+| +++++|
T Consensus 108 ----------~GViG~~~~Hl~~~~~~~~--~~~~~~~l~IDiGa~ske-------------------------e~~~~G 150 (350)
T TIGR03107 108 ----------PVISGSVPPHLLRGSSGGP--QLPAVSDILFDGGFTNKD-------------------------EAWSFG 150 (350)
T ss_pred ----------EEEEeCCcccccChhhccc--ccCChhhEEEEeCCCCHH-------------------------HHHhcC
Confidence 6999999999987654 33 667889999999999976 788999
Q ss_pred CCCCCeeEEEEEEeecCCccccCCCCceEEeccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccc
Q 015250 160 CGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239 (410)
Q Consensus 160 V~~gd~v~~dl~~~~~~~~~~~G~~~~~i~gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~ 239 (410)
|++||+++|+..|.... +++++.||+||||+|||+++++++++++. +.+..++++||+|||||+|||+
T Consensus 151 I~vGd~v~~~~~~~~~~-------~~~~i~~kalDdR~g~a~l~e~l~~l~~~-----~~~~~l~~~~tvqEEvG~rGA~ 218 (350)
T TIGR03107 151 VRPGDVIVPQTETILTA-------NGKNVISKAWDNRYGVLMILELLESLKDQ-----ELPNTLIAGANVQEEVGLRGAH 218 (350)
T ss_pred CCCCCEEEECCCeEEEc-------CCCEEEEeccccHHHHHHHHHHHHHhhhc-----CCCceEEEEEEChhhcCchhhh
Confidence 99999999999887641 45779999999999999999999998642 1355688899999999999999
Q ss_pred ccCCcchHHHHHHHHHhcCCCCCChhHHHHHhhccceEEEecCCCCCCCCCccccccCCCcCCCccEEEEcCCCccccCH
Q 015250 240 GAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSG 319 (410)
Q Consensus 240 gA~~~~~p~~l~ri~~~~~~~~~~~~~~~~~~~~s~~is~Dv~~a~~P~~~~~~~~~~~~~LG~Gpvi~~~~~~~~~t~~ 319 (410)
+|++.+ +||++|++|++++.|. ++.. ..+||+||+|+.+|++ ++.|+
T Consensus 219 ~aa~~i--------------------------~pD~aI~vDv~~~~d~--~~~~----~~~lg~Gp~i~~~D~~-~i~~~ 265 (350)
T TIGR03107 219 VSTTKF--------------------------NPDIFFAVDCSPAGDI--YGDQ----GGKLGEGTLLRFFDPG-HIMLP 265 (350)
T ss_pred hHHhhC--------------------------CCCEEEEEecCCcCCC--CCCC----ccccCCCceEEEecCC-CCCCH
Confidence 998875 5689999999999763 2211 1689999999999886 88999
Q ss_pred HHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHHHHhhc
Q 015250 320 VTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESF 399 (410)
Q Consensus 320 ~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af~~~~ 399 (410)
.+.++++++|+++|||||+ +. ..||++++.++.++.|+||+.||||+|||||+.|+++++|++++++|+.+|++.+
T Consensus 266 ~l~~~l~~~A~~~~I~~Q~-~~---~~gGtDa~~~~~~~~Gvpt~~i~ip~Ry~Hs~~e~i~~~D~~~~~~Ll~~~i~~l 341 (350)
T TIGR03107 266 RMKDFLLTTAEEAGIKYQY-YV---AKGGTDAGAAHLKNSGVPSTTIGVCARYIHSHQTLYSIDDFLAAQAFLQAIVKKL 341 (350)
T ss_pred HHHHHHHHHHHHcCCCcEE-ec---CCCCchHHHHHHhCCCCcEEEEccCcccccChhheeeHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999 43 1356667789999999999999999999999999999999999999999999987
Q ss_pred cc
Q 015250 400 SS 401 (410)
Q Consensus 400 ~~ 401 (410)
..
T Consensus 342 ~~ 343 (350)
T TIGR03107 342 DR 343 (350)
T ss_pred CH
Confidence 54
No 10
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=100.00 E-value=1.9e-63 Score=488.72 Aligned_cols=291 Identities=24% Similarity=0.248 Sum_probs=234.8
Q ss_pred ceEEEEEeCCCCCCCCCcEEEEeecCCCceeeecCCccCCCCeeEEeEEEeCCCcccccccceeccccEEEEECCCCceE
Q 015250 2 SCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGYLMVNVQTYGGGLWHTWFDRDLTVAGRVIVRGSDGSFL 81 (410)
Q Consensus 2 gslia~~~g~~~~~~~~~~mi~AH~De~g~~Vk~~~~i~~~G~~~l~~~~yGG~~~~tw~dr~L~lagrV~~~~~~g~~~ 81 (410)
|||||.+.|+. +.+.+||+|||||+||+|+. |+++|| |+|.++||| .++.| ++++|.+.+++|.+
T Consensus 1 Gnvi~~~~g~~---~~~~vmi~AHmDEiG~iV~~---I~~~G~--l~~~~lGg~-----~~~~l-~gq~v~i~~~~g~i- 65 (292)
T PF05343_consen 1 GNVIARKKGKE---GGPKVMIAAHMDEIGFIVRH---IDDDGF--LRFVPLGGI-----DPRVL-PGQRVRIHTRDGDI- 65 (292)
T ss_dssp S-EEEEECSSC---SSSEEEEEEE--B-EEEEEE---EETTSE--EEEEEESS-------GGGT-TTEEEEEEETTEEE-
T ss_pred CcEEEEECCCC---CCceEEEEEccceeeEEEEE---ECCCCE--EEEEEcCCc-----Ccccc-CCCEEEEEcCCcEE-
Confidence 79999988732 24469999999999999999 999999 558999994 44444 78899999887744
Q ss_pred EEeeecCCCeEEecCCccccccccccCCCCCCccccceeeeeccCccccCCccccCCCCCCccCChhHHHHHHHHHcCCC
Q 015250 82 HKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCG 161 (410)
Q Consensus 82 ~~l~~~~~~~gvIp~laiHl~~~~~~~~~~~~~~~~l~~diG~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~gV~ 161 (410)
.|+|+.+++|+.++.+++ +..+.++|++|+|++|++ +++++||+
T Consensus 66 ---------~Gvig~~~~H~~~~~~~~--~~~~~~~l~iDiGa~s~e-------------------------e~~~~GV~ 109 (292)
T PF05343_consen 66 ---------PGVIGSKPPHLQSEEERK--KVPKWDDLFIDIGASSKE-------------------------EVEELGVR 109 (292)
T ss_dssp ---------EEEEEE--GGGCCHHHHH--STTEGGGEEEECSGSSHH-------------------------HHHHTTS-
T ss_pred ---------EEEEcCCCCcccChhhcc--cCCCcceEEEEeccCCHH-------------------------HHHhCCCC
Confidence 799999999999876544 567789999999998876 78999999
Q ss_pred CCCeeEEEEEEeecCCccccCCCCceEEeccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccccc
Q 015250 162 TDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGA 241 (410)
Q Consensus 162 ~gd~v~~dl~~~~~~~~~~~G~~~~~i~gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~gA 241 (410)
+||+++||..|... ++.+|.||+||||+||++++++|+.+++. ..+..++++||+|||||+|||+.|
T Consensus 110 iGd~v~~~~~~~~~--------~~~~i~gkalDdR~g~~~lle~l~~l~~~-----~~~~~v~~v~tvqEEvG~rGA~~a 176 (292)
T PF05343_consen 110 IGDPVVFDPPFREL--------GNGRIVGKALDDRAGCAVLLELLRELKEK-----ELDVDVYFVFTVQEEVGLRGAKTA 176 (292)
T ss_dssp TT-EEEES---EEE--------TTTEEEETTHHHHHHHHHHHHHHHHHTTS-----S-SSEEEEEEESSCTTTSHHHHHH
T ss_pred CCCEEeecCCeEEe--------CCCEEEEEeCCchhHHHHHHHHHHHHhhc-----CCCceEEEEEEeeeeecCcceeec
Confidence 99999999999875 46779999999999999999999998753 124678999999999999999998
Q ss_pred CCcchHHHHHHHHHhcCCCCCChhHHHHHhhccceEEEecCCCCC-CCCCccccccCCCcCCCccEEEEcCCCccccCHH
Q 015250 242 GAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVH-PNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGV 320 (410)
Q Consensus 242 ~~~~~p~~l~ri~~~~~~~~~~~~~~~~~~~~s~~is~Dv~~a~~-P~~~~~~~~~~~~~LG~Gpvi~~~~~~~~~t~~~ 320 (410)
++. ++||++|++|++++.| |..++ . ...||+||+|+++|.. ++.|+.
T Consensus 177 a~~--------------------------i~PD~ai~vD~~~a~d~~~~~~---~--~~~lG~Gp~i~~~D~~-~i~~~~ 224 (292)
T PF05343_consen 177 AFR--------------------------IKPDIAIAVDVTPAGDTPGSDE---K--EQGLGKGPVIRVGDSS-MIPNPK 224 (292)
T ss_dssp HHH--------------------------H-CSEEEEEEEEEESSSTTSTT---T--TSCTTS-EEEEEEETT-EESHHH
T ss_pred ccc--------------------------cCCCEEEEEeeeccCCCCCCch---h--hccCCCCcEEEEccCC-CCCCHH
Confidence 765 4679999999999987 43332 1 2239999999999886 899999
Q ss_pred HHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHH
Q 015250 321 TAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRH 391 (410)
Q Consensus 321 ~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~l 391 (410)
+.++|+++|++++||||+.+.. .+||+.+.++.++.|+||+.||||+|||||+.|+++++|++++++|
T Consensus 225 l~~~l~~~A~~~~Ip~Q~~~~~---~ggTDa~~~~~~~~Gi~t~~i~iP~ry~Hs~~e~~~~~Di~~~~~L 292 (292)
T PF05343_consen 225 LVDKLREIAEENGIPYQREVFS---GGGTDAGAIQLSGGGIPTAVISIPCRYMHSPVEVIDLDDIEATIDL 292 (292)
T ss_dssp HHHHHHHHHHHTT--EEEEEES---SSSSTHHHHHTSTTSSEEEEEEEEEBSTTSTTEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCeEEEecC---CcccHHHHHHHcCCCCCEEEEecccccCCCcceEEEHHHHHHHhhC
Confidence 9999999999999999997652 4566677999999999999999999999999999999999999987
No 11
>PRK09961 exoaminopeptidase; Provisional
Probab=100.00 E-value=2e-60 Score=477.52 Aligned_cols=293 Identities=14% Similarity=0.098 Sum_probs=246.2
Q ss_pred ceEEEEEeCCCCCCCCCcEEEEeecCCCceeeecCCccCCCCeeEEeEEEeCCCcccccccceeccccEEEEECCCCceE
Q 015250 2 SCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGYLMVNVQTYGGGLWHTWFDRDLTVAGRVIVRGSDGSFL 81 (410)
Q Consensus 2 gslia~~~g~~~~~~~~~~mi~AH~De~g~~Vk~~~~i~~~G~~~l~~~~yGG~~~~tw~dr~L~lagrV~~~~~~g~~~ 81 (410)
||++|...|+. .+.+|++||||++||||++ |+++||+ ++.++|| |++|.| +++||.+.+++|+.
T Consensus 43 Gnvi~~~~g~~----~~~v~l~aHmDevg~~V~~---I~~~G~l--~~~~vGG-----~~~~~~-~~~~v~i~~~~g~~- 106 (344)
T PRK09961 43 GSVLIRLNEST----GPKVMICAHMDEVGFMVRS---ISREGAI--DVLPVGN-----VRMAAR-QLQPVRITTREECK- 106 (344)
T ss_pred CCEEEEEcCCC----CCEEEEEeccceeceEEEE---ECCCceE--EEEeCCC-----cccccc-CCCEEEEEeCCCCE-
Confidence 78998654532 2369999999999999999 9999995 5899999 666655 89999999877641
Q ss_pred EEeeecCCCeEEecCCccccccccccCCCCCCccccceeeeeccCccccCCccccCCCCCCccCChhHHHHHHHHHcCCC
Q 015250 82 HKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCG 161 (410)
Q Consensus 82 ~~l~~~~~~~gvIp~laiHl~~~~~~~~~~~~~~~~l~~diG~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~gV~ 161 (410)
..|+| ++++ + + .+.++|++|+|++|+| +++++||+
T Consensus 107 --------i~Gvi--------~~~~-~--~-~~~~~l~iDiG~~s~e-------------------------e~~~~GI~ 141 (344)
T PRK09961 107 --------IPGLL--------NGDR-Q--G-NDVSAMRVDIGARSYD-------------------------EVMQAGIR 141 (344)
T ss_pred --------eeEEE--------Chhh-c--C-CCHHHEEEEcCCCCHH-------------------------HHHhcCCC
Confidence 26888 1122 2 4 5778999999999875 78899999
Q ss_pred CCCeeEEEEEEeecCCccccCCCCceEEeccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccccc
Q 015250 162 TDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGA 241 (410)
Q Consensus 162 ~gd~v~~dl~~~~~~~~~~~G~~~~~i~gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~gA 241 (410)
+||+++||..|... +++++.||+||||+|||+++++|++++++ +.+...+++||+|||||+|||++|
T Consensus 142 ~Gd~v~~~~~~~~~--------~~~~i~gkalDnR~g~~~lle~l~~l~~~-----~~~~~v~~~~tvqEEvG~rGa~~a 208 (344)
T PRK09961 142 PGDRVTFDTTFQVL--------PHQRVMGKAFDDRLGCYLLVTLLRELHDA-----ELPAEVWLVASSSEEVGLRGGQTA 208 (344)
T ss_pred CCCEEEEcceeEEe--------cCCEEEEeechhhHhHHHHHHHHHHhhhc-----CCCceEEEEEEcccccchHHHHHH
Confidence 99999999999874 46789999999999999999999988642 134567899999999999999999
Q ss_pred CCcchHHHHHHHHHhcCCCCCChhHHHHHhhccceEEEecCCCCCCCCCccccccCCCcCCCccEEEEcCCCccccCHHH
Q 015250 242 GAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVT 321 (410)
Q Consensus 242 ~~~~~p~~l~ri~~~~~~~~~~~~~~~~~~~~s~~is~Dv~~a~~P~~~~~~~~~~~~~LG~Gpvi~~~~~~~~~t~~~~ 321 (410)
++.+ +||++|++|++++.+ +++. +..+.++||+||+|+.++.+ +++|+.+
T Consensus 209 a~~i--------------------------~pd~~I~vDv~~~~d--~~~~-~~~~~~~lg~Gp~i~~~D~~-~i~~~~l 258 (344)
T PRK09961 209 TRAV--------------------------SPDVAIVLDTACWAK--NFDY-GAANHRQIGNGPMLVLSDKS-LIAPPKL 258 (344)
T ss_pred Hhcc--------------------------CCCEEEEEeccCCCC--CCCC-CCCcccccCCCceEEEccCC-cCCCHHH
Confidence 9875 568999999998544 4442 23335799999999998664 9999999
Q ss_pred HHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHHHHhhccc
Q 015250 322 AFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSS 401 (410)
Q Consensus 322 ~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af~~~~~~ 401 (410)
.++++++|++++||||+.+.. ++|||+++++.++.|+||+.+|+|+|||||++|+++++|++++++|+.+|++.+..
T Consensus 259 ~~~l~~~A~~~~Ip~Q~~~~~---ggGTDa~~~~~~~~Giptv~ig~p~ry~Hs~~E~v~~~D~~~~~~Ll~~~i~~l~~ 335 (344)
T PRK09961 259 TAWIETVAAEIGIPLQADMFS---NGGTDGGAVHLTGTGVPTVVMGPATRHGHCAASIADCRDILQMIQLLSALIQRLTR 335 (344)
T ss_pred HHHHHHHHHHcCCCcEEEecC---CCcchHHHHHHhCCCCCEEEechhhhcccChhheEEHHHHHHHHHHHHHHHHHcCH
Confidence 999999999999999996542 35677889999999999999999999999999999999999999999999988754
No 12
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=100.00 E-value=4.6e-57 Score=452.61 Aligned_cols=290 Identities=18% Similarity=0.144 Sum_probs=243.3
Q ss_pred ceEEEEEeCCCCCCCCCcEEEEeecCCCceeeecCCccCCCCeeEEeEEEeCCCcccccccceeccccEEEEECCCCceE
Q 015250 2 SCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGYLMVNVQTYGGGLWHTWFDRDLTVAGRVIVRGSDGSFL 81 (410)
Q Consensus 2 gslia~~~g~~~~~~~~~~mi~AH~De~g~~Vk~~~~i~~~G~~~l~~~~yGG~~~~tw~dr~L~lagrV~~~~~~g~~~ 81 (410)
||++|...|+. +.+.+|++||||++||||+. |+++||+ +|.++|| |+++.| ++++|.+.+.+|++
T Consensus 46 Gnlia~~~g~~---~~~~v~l~aHmDevG~~V~~---I~~~G~l--~~~~iGG-----~~~~~l-~g~~v~i~t~~g~~- 110 (343)
T TIGR03106 46 GAIRATLPGRE---ATPARAVVTHLDTLGAMVRE---LKDNGRL--ELVPIGH-----WSARFA-EGARVTIFTDSGEF- 110 (343)
T ss_pred eEEEEEECCCC---CCCeEEEEEeeccccceeeE---ECCCCeE--EEEecCC-----Ccccce-eCCEEEEEeCCCeE-
Confidence 79999876632 12369999999999999999 9999995 5899999 555545 78899999866543
Q ss_pred EEeeecCCCeEEe-c-CCccccccccccCCCCCCccc--cceeeeeccCccccCCccccCCCCCCccCChhHHHHHHHHH
Q 015250 82 HKLVKVKRPLLRV-P-TLAIHLDRTVNKDGFKPNLET--QLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQE 157 (410)
Q Consensus 82 ~~l~~~~~~~gvI-p-~laiHl~~~~~~~~~~~~~~~--~l~~diG~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 157 (410)
.|+| + .+|+|+.++++++ +..+.+ +|++|+|+.++| ++++
T Consensus 111 ---------~Gvi~~~~~~~H~~~~~~~~--~~~~~~~~~l~iDiG~~s~e-------------------------e~~~ 154 (343)
T TIGR03106 111 ---------RGTILPLKASGHAFNEEIDS--QPTGWDHVEVRVDARASCRA-------------------------DLVR 154 (343)
T ss_pred ---------EEEECCCCCCCccCChHHcc--CCCCCcccEEEEECCcCCHH-------------------------HHHH
Confidence 6999 7 9999999876544 567788 999999999876 7889
Q ss_pred cCCCCCCeeEEEEEEeecCCccccCCCCceEEeccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccc
Q 015250 158 LGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDS 237 (410)
Q Consensus 158 ~gV~~gd~v~~dl~~~~~~~~~~~G~~~~~i~gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrg 237 (410)
+||++||+++|+..|... +++++.||++|||+||++++++++.++... . +.+...+++||+|||+| +|
T Consensus 155 lGV~~Gd~v~~~~~~~~~--------~~~~i~gr~~D~K~G~a~~l~~~~~l~~~~--~-~~~~~v~~~~t~qEEvG-~g 222 (343)
T TIGR03106 155 LGISVGDFVAFDPQPEFL--------ANGFIVSRHLDDKAGVAALLAALKAIVEHK--V-PLPVDVHPLFTITEEVG-SG 222 (343)
T ss_pred cCCCCCCEEEECCccEEe--------cCCEEEEEecccHHhHHHHHHHHHHHHhcC--C-CCCceEEEEEECCcccC-cc
Confidence 999999999999988653 467899999999999999999998875321 0 12456788999999999 66
Q ss_pred ccccCCcchHHHHHHHHHhcCCCCCChhHHHHHhhccce--EEEecCCCCCCCCCccccccCCCcCCCccEEEEcCCCcc
Q 015250 238 YQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFL--VSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRY 315 (410)
Q Consensus 238 a~gA~~~~~p~~l~ri~~~~~~~~~~~~~~~~~~~~s~~--is~Dv~~a~~P~~~~~~~~~~~~~LG~Gpvi~~~~~~~~ 315 (410)
++..+.| +++ |++|++++ .| + ..+||+||+|+.+|++ +
T Consensus 223 ---aa~~i~p--------------------------d~a~~i~vd~~~~-~p---~------~~~lg~Gp~i~~~d~~-~ 262 (343)
T TIGR03106 223 ---ASHALPP--------------------------DVAELVSVDNGTV-AP---G------QNSSEHGVTIAMADSS-G 262 (343)
T ss_pred ---chhcccH--------------------------hhhccEEEEeccc-CC---C------CCcCCCCceEEEecCC-C
Confidence 4555555 566 99999997 32 2 2679999999998876 8
Q ss_pred ccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHHH
Q 015250 316 ATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAF 395 (410)
Q Consensus 316 ~t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af 395 (410)
..|+.+.++++++|+++|||||+.+.. .+||+++.+|.++.||||+.||||+||||| +|+++++|++++++||.+|
T Consensus 263 ~~~~~l~~~l~~~A~~~~Ip~Q~~~~~---~~gtDa~~~~~~~~Gi~t~~i~iP~Ry~Hs-~e~~~~~D~~~~~~Ll~~~ 338 (343)
T TIGR03106 263 PFDYHLTRKLIRLCQDHGIPHRRDVFR---YYRSDAASAVEAGHDIRTALVTFGLDASHG-YERTHIDALEALANLLVAY 338 (343)
T ss_pred CCCHHHHHHHHHHHHHcCCCcEEEecC---CCCChHHHHHHcCCCCCEEEeeccccchhh-hhhccHHHHHHHHHHHHHH
Confidence 889999999999999999999998762 356777799999999999999999999999 9999999999999999999
Q ss_pred Hhh
Q 015250 396 YES 398 (410)
Q Consensus 396 ~~~ 398 (410)
+.+
T Consensus 339 ~~~ 341 (343)
T TIGR03106 339 AQS 341 (343)
T ss_pred hcc
Confidence 843
No 13
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=98.63 E-value=1.7e-07 Score=85.01 Aligned_cols=159 Identities=16% Similarity=0.107 Sum_probs=107.3
Q ss_pred CceEEeccC-CcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCcc-cccccCCcchHHHHHHHHHhcCCCCC
Q 015250 185 NEFIFSGRL-DNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSD-SYQGAGAPTMFQAIRRIVGSLAHEHV 262 (410)
Q Consensus 185 ~~~i~gkal-Dnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsr-ga~gA~~~~~p~~l~ri~~~~~~~~~ 262 (410)
++++.|++. |+..++++++.+++.+.+.. ...+..+.++++..||+|+. |++-.. ..
T Consensus 26 ~~~~~grG~~D~k~~~~~~l~a~~~l~~~~---~~~~~~i~~~~~~~EE~g~~~g~~~l~------------~~------ 84 (189)
T PF01546_consen 26 DGRLYGRGADDMKGGIAAMLAALKALKESG---DDLPGNIIFLFTPDEEIGSIGGAKHLL------------EE------ 84 (189)
T ss_dssp TTEEESTTTTTTHHHHHHHHHHHHHHHHTT---TTCSSEEEEEEESTCCGTSTTHHHHHH------------HH------
T ss_pred CCEEEcCCcCCCcccHHHHHHHHHHHHhcc---ccccccccccccccccCCCcchhhhhh------------hh------
Confidence 567778776 67888888888888764211 12355678899999999988 544211 00
Q ss_pred ChhHHHHHhhccceEEEecCCCCCCCCCccccccCCCcCCCccEEEEcCCCccccCHHHHHHHHHHHHHCCC-CEeEEEe
Q 015250 263 SETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNL-PTQEFVV 341 (410)
Q Consensus 263 ~~~~~~~~~~~s~~is~Dv~~a~~P~~~~~~~~~~~~~LG~Gpvi~~~~~~~~~t~~~~~~~l~~~A~~~~I-p~Q~~~~ 341 (410)
.....+++++++..|.+... .+. ...++.+.+.+.+.+++.+. +......
T Consensus 85 ---~~~~~~~~~~~~~~e~~~~~-------------------~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (189)
T PF01546_consen 85 ---GAFFGLHPDYVIIGEPTGKG-------------------GVG-------SDNDPPLVQALQAAAQEVGGEPPEPVAS 135 (189)
T ss_dssp ---CEEEEEEESEEEECECETTS-------------------EEE-------HCTCHHHHHHHHHHHHHTTSSEEEEEEE
T ss_pred ---cccccccccccccccccccc-------------------ccc-------ccccHHHHHHHHHHHHHHhhccccccce
Confidence 00001234444444432211 000 23478899999999999987 5555443
Q ss_pred ecCCCCCCChHHHHhc--CCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHHHHhh
Q 015250 342 RNDMGCGSTIGPILAS--GVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYES 398 (410)
Q Consensus 342 ~~d~~~G~t~g~i~~s--~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af~~~ 398 (410)
+|+|+.+.... ..|+|++.+|.---.+|++.|-+..+|+...++++.++++|
T Consensus 136 -----~g~tD~~~~~~~~~~~~~~i~~G~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~n 189 (189)
T PF01546_consen 136 -----GGGTDAGFLAEVKGLGIPAIGFGPGGSNAHTPDEYIDIEDLVKGAKIYAALLEN 189 (189)
T ss_dssp -----SSSSTHHHHHCHHHTTEEEEEEESCEESTTSTT-EEEHHHHHHHHHHHHHHHHT
T ss_pred -----eccccchhhhhhhccccceeeeCCCCCCCCCCCcEecHHHHHHHHHHHHHHHhC
Confidence 35555544443 57999999988889999999999999999999999999875
No 14
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=98.41 E-value=7.2e-06 Score=82.56 Aligned_cols=74 Identities=23% Similarity=0.230 Sum_probs=61.2
Q ss_pred CHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHHHHh
Q 015250 318 SGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYE 397 (410)
Q Consensus 318 ~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af~~ 397 (410)
|..+.+.+++.+++.+++.+... .+|+|++.+.. ..|||++.+|.+.+++||+.|.++++|+...++++..+++
T Consensus 288 ~~~lv~~l~~a~~~~g~~~~~~~-----~~g~tD~~~~~-~~giP~v~~G~g~~~~Hs~~E~v~i~~~~~~~~~~~~~~~ 361 (361)
T TIGR01883 288 QHPLMNIFKKAAKKIGLKTSEIF-----SGGGSDANVLN-EKGVPTVNLSAGYVHAHTEKETISIEQLVKLAELVIALAE 361 (361)
T ss_pred CCHHHHHHHHHHHHcCCCcEEEe-----cCcccHHHHHh-hCCCceEEECCCcccCcCcceeEEHHHHHHHHHHHHHHhC
Confidence 56788888998998888877532 24666665554 3699999999999999999999999999999999998864
No 15
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=97.48 E-value=0.0001 Score=74.37 Aligned_cols=49 Identities=16% Similarity=-0.100 Sum_probs=38.4
Q ss_pred EeccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCcccccccC
Q 015250 189 FSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAG 242 (410)
Q Consensus 189 ~gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~gA~ 242 (410)
.=.+.||..||++++++++.+++. .......+++++.||+|+.|++-.+
T Consensus 138 ~~GA~DnasGvA~lLe~ar~l~~~-----~~~~~I~fv~~~~EE~Gl~GS~~~~ 186 (346)
T PRK10199 138 LQGMDDNAAGLGVMLELAERLKNV-----PTEYGIRFVATSGEEEGKLGAENLL 186 (346)
T ss_pred cCCccccHHHHHHHHHHHHHHhhC-----CCCCcEEEEEECCcccCcHHHHHHH
Confidence 346899999999999999887542 1234578899999999999887543
No 16
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=97.43 E-value=0.0049 Score=64.93 Aligned_cols=79 Identities=13% Similarity=0.087 Sum_probs=59.2
Q ss_pred cCHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHHH
Q 015250 317 TSGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAF 395 (410)
Q Consensus 317 t~~~~~~~l~~~A~~-~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af 395 (410)
.|..+...+.+.+++ .|.+.+.... +||++.+.+.....|+|++.+|.+.-.+|++.|-+.++|+...++++..+
T Consensus 397 ~d~plv~~l~~a~~~~~g~~~~~~~~----~Ggtd~~~~~~~~~~i~~v~~Gp~~~~~H~~nE~i~i~~l~~~~~~~~~l 472 (477)
T TIGR01893 397 PQSNLLDTARKVYSEMFGEDPEVKVI----HAGLECGIISSKIPDIDMISIGPNIYDPHSPNERVSISSVEKVWDFLVKV 472 (477)
T ss_pred CCCHHHHHHHHHHHHHHCCCCeEEEe----ecCccHHHHHhhCCCceEEEeCCCCCCCCCCCceeeHHHHHHHHHHHHHH
Confidence 455666777776665 5777765443 34444333333335899999999999999999999999999999999999
Q ss_pred Hhhc
Q 015250 396 YESF 399 (410)
Q Consensus 396 ~~~~ 399 (410)
+..+
T Consensus 473 l~~~ 476 (477)
T TIGR01893 473 LERL 476 (477)
T ss_pred HHhc
Confidence 9765
No 17
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=97.28 E-value=0.00025 Score=64.29 Aligned_cols=154 Identities=14% Similarity=0.025 Sum_probs=85.6
Q ss_pred EEeccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCcccccccCCcchHHHHHHHHHhcCCCCCChhHH
Q 015250 188 IFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSF 267 (410)
Q Consensus 188 i~gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~gA~~~~~p~~l~ri~~~~~~~~~~~~~~ 267 (410)
+.-.+.||-.||+++++..+.+++.. . ..+..+.+++++.||.|+.|++.-+.. .+..
T Consensus 20 ~~~GA~DnasGva~lLelAr~l~~~~--~-~~~~~i~fv~~~~EE~gl~GS~~~~~~-~~~~------------------ 77 (179)
T PF04389_consen 20 WSPGANDNASGVAALLELARVLKELK--P-QPKRTIRFVFFDGEEQGLLGSRAFVEH-DHEE------------------ 77 (179)
T ss_dssp SSS-TTTTHHHHHHHHHHHHHHHHST--H-SSSEEEEEEEESSGGGTSHHHHHHHHH-HHCH------------------
T ss_pred ccCCcccchHHHHHHHHHHHHHHHhh--c-ccCccEEEEEecccccCccchHHHHHh-hhcc------------------
Confidence 56778999999999999887775310 0 123467889999999999988744321 1110
Q ss_pred HHHhhccceEEEecCCCCCCCCCccccccCCCcCCCccEEEEcCCCccccCHHHHHHHHHHHHHCCCCEeEEEe-ecCCC
Q 015250 268 ECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVV-RNDMG 346 (410)
Q Consensus 268 ~~~~~~s~~is~Dv~~a~~P~~~~~~~~~~~~~LG~Gpvi~~~~~~~~~t~~~~~~~l~~~A~~~~Ip~Q~~~~-~~d~~ 346 (410)
..+-..+|.+|+....++ .+...... .....+.+.+.++++.....++.... .....
T Consensus 78 --~~~~~~~inlD~~g~~~~------------------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (179)
T PF04389_consen 78 --LDNIAAVINLDMIGSGDP------------------TVYSEGSP--SLPSRLEAYLSSFKQPYGSSLGPDVPPEKPTF 135 (179)
T ss_dssp --HHHEEEEEEECSSBSSSS------------------EEEEEEGG--GHHHHHHHHHHHHHHHHHCHTSSECEEEESST
T ss_pred --cccceeEEeccccccCcc------------------cceeeeec--cccchhhhhhhhhhhhhhcccccccccccCCC
Confidence 122346788886543221 11111110 00112455555554442222222111 11234
Q ss_pred CCCChHHHHhcCCCCcEEEeccc---cccccchhhhcCHHHHHH
Q 015250 347 CGSTIGPILASGVGIRTVDCGIA---QLSMHSVREICGTEDIDI 387 (410)
Q Consensus 347 ~G~t~g~i~~s~~Gi~ti~igiP---~ryMHS~~E~~~~~D~~~ 387 (410)
++++..++. ..|||++.+.-= -.+-||+.-+++.-|.+.
T Consensus 136 ~~sD~~~F~--~~gip~~~~~~~~~~~~~~Ht~~Dt~~~~~~~~ 177 (179)
T PF04389_consen 136 GGSDHYPFS--KAGIPAVTLSSTDGYNPYYHTPEDTPDNLDPDT 177 (179)
T ss_dssp TSSTCHHHH--TTT-EEEEEEESSSSGTTTTSTT-SGGGC-HHH
T ss_pred CCCCcHhhh--cCCEeEEEEEecCCCCCCCCCcccChhhcCCcc
Confidence 566666777 689999877543 366699888877766554
No 18
>PRK13381 peptidase T; Provisional
Probab=97.01 E-value=0.0019 Score=66.39 Aligned_cols=78 Identities=15% Similarity=0.035 Sum_probs=63.8
Q ss_pred cCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHHHH
Q 015250 317 TSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFY 396 (410)
Q Consensus 317 t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af~ 396 (410)
.|..+.+.+++.+++.|++.+... .+|+|++.+.. ..|||++.+|.+...+|++.|-++++|++.+++++..++
T Consensus 326 ~~~~lv~~l~~a~~~~g~~~~~~~-----~~g~tDa~~~~-~~giP~v~~GpG~~~aH~~dE~v~i~~l~~~~~v~~~~~ 399 (404)
T PRK13381 326 DDRRAVDLAFDAMKELGIEPKVIP-----MRGGTDGAALS-AKGLPTPNLFTGAHNFHSRFEFLPVSSFVKSYEVTITIC 399 (404)
T ss_pred cCHHHHHHHHHHHHHcCCCeeecc-----CCccchHHHHh-cCCCCeEEECccccCCcCcceeEEHHHHHHHHHHHHHHH
Confidence 377888899999998898876532 23555555444 369999999999999999999999999999999999999
Q ss_pred hhcc
Q 015250 397 ESFS 400 (410)
Q Consensus 397 ~~~~ 400 (410)
..+.
T Consensus 400 ~~~~ 403 (404)
T PRK13381 400 LLAA 403 (404)
T ss_pred HHhc
Confidence 8764
No 19
>PRK05469 peptidase T; Provisional
Probab=96.97 E-value=0.0021 Score=66.10 Aligned_cols=79 Identities=15% Similarity=0.014 Sum_probs=64.9
Q ss_pred cCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHHHH
Q 015250 317 TSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFY 396 (410)
Q Consensus 317 t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af~ 396 (410)
.|..+.+.+++.+++.|++.+... ..|+|++.+.. ..||||+.+|.+...+|++.|.++.+|+...++++..++
T Consensus 328 ~~~~lv~~~~~a~~~~g~~~~~~~-----~~ggtD~~~~~-~~giP~v~~gpG~~~~H~~~E~v~i~~l~~~~~~~~~~~ 401 (408)
T PRK05469 328 PHPHIVDLAKQAMEDLGIEPIIKP-----IRGGTDGSQLS-FMGLPCPNIFTGGHNFHGKFEFVSLESMEKAVEVIVEIA 401 (408)
T ss_pred CCHHHHHHHHHHHHHcCCCcEEec-----CCCcccHHHHh-hCCCceEEECcCcccCcCcceeeEHHHHHHHHHHHHHHH
Confidence 477889999999999998877432 23555555443 369999999999999999999999999999999999999
Q ss_pred hhccc
Q 015250 397 ESFSS 401 (410)
Q Consensus 397 ~~~~~ 401 (410)
..|.+
T Consensus 402 ~~~~~ 406 (408)
T PRK05469 402 ELTAE 406 (408)
T ss_pred HHHhc
Confidence 87754
No 20
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=96.66 E-value=0.0047 Score=63.80 Aligned_cols=78 Identities=10% Similarity=-0.078 Sum_probs=63.9
Q ss_pred cCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccccc--cchhhhcCHHHHHHHHHHHHH
Q 015250 317 TSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSM--HSVREICGTEDIDIAYRHFKA 394 (410)
Q Consensus 317 t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryM--HS~~E~~~~~D~~~~~~ll~a 394 (410)
.|..+.+.+++.+++.|++.+... .+|+|++.+. ..|+|++.+..|...+ |++.|.++.+|+...++++..
T Consensus 331 ~d~~lv~~l~~a~~~~G~~~~~~~-----~~ggtDa~~~--~~giPt~~~~gp~~~~~aH~~dE~v~i~~l~~~~~il~~ 403 (414)
T PRK12891 331 FAPGCIDAVRDAARALGLSHMDIV-----SGAGHDACFA--ARGAPTGMIFVPCVDGLSHNEAEAITPEWFAAGADVLLR 403 (414)
T ss_pred CCHHHHHHHHHHHHHcCCCceecC-----CcchHHHHHH--HhhCCEEEEEEcCCCCCCCCccccCCHHHHHHHHHHHHH
Confidence 477899999999999999887532 2455555543 3489999888899875 999999999999999999999
Q ss_pred HHhhccc
Q 015250 395 FYESFSS 401 (410)
Q Consensus 395 f~~~~~~ 401 (410)
++..+.+
T Consensus 404 ~l~~~~~ 410 (414)
T PRK12891 404 AVLQSAQ 410 (414)
T ss_pred HHHHHhh
Confidence 9988854
No 21
>PRK08554 peptidase; Reviewed
Probab=96.53 E-value=0.0068 Score=63.31 Aligned_cols=77 Identities=10% Similarity=0.095 Sum_probs=65.0
Q ss_pred cCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHHHH
Q 015250 317 TSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFY 396 (410)
Q Consensus 317 t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af~ 396 (410)
.+..+.+.+++++++.|++.+.... +|+|++.+... .|+||+++|.---.+|++.|-+.++++..+.+++..++
T Consensus 360 ~~~~lv~~~~~~~~~~g~~~~~~~~-----~GgtDa~~~~~-~Gip~v~~Gp~~~~~H~~~E~v~i~~l~~~~~i~~~~i 433 (438)
T PRK08554 360 PDEEIVKVALRVLKELGEDAEPVEG-----PGASDSRYFTP-YGVKAIDFGPKGGNIHGPNEYVEIDSLKKMPEVYKRIA 433 (438)
T ss_pred CChHHHHHHHHHHHHhCCCcEEEec-----CCchHHHHHHh-cCCCceEECCCCCCCCCCcceEEHHHHHHHHHHHHHHH
Confidence 4788899999999999998876542 56677766543 68999999996678999999999999999999999998
Q ss_pred hhc
Q 015250 397 ESF 399 (410)
Q Consensus 397 ~~~ 399 (410)
..|
T Consensus 434 ~~l 436 (438)
T PRK08554 434 LRL 436 (438)
T ss_pred HHH
Confidence 765
No 22
>PRK07473 carboxypeptidase; Provisional
Probab=96.02 E-value=0.0098 Score=60.72 Aligned_cols=75 Identities=17% Similarity=0.182 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEE-eccccccccchhhhcCHHHHHHHHHHHHHHHh
Q 015250 319 GVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVD-CGIAQLSMHSVREICGTEDIDIAYRHFKAFYE 397 (410)
Q Consensus 319 ~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~-igiP~ryMHS~~E~~~~~D~~~~~~ll~af~~ 397 (410)
+.+.+.+++.++..+++..... .+|+|++.+... .||||++ +|.--..+|++-|-++++|+..+++++..++.
T Consensus 300 ~~l~~~~~~~~~~~g~~~~~~~-----~~g~tDa~~~~~-~giP~v~g~Gpg~~~~H~~dE~v~i~~l~~~~~vl~~~l~ 373 (376)
T PRK07473 300 MALYEKARAIAGQLGLSLPHGS-----AGGGSDGNFTGA-MGIPTLDGLGVRGADYHTLNEHIEVDSLAERGRLMAGLLA 373 (376)
T ss_pred HHHHHHHHHHHHHcCCCCcccc-----CccccHhhhHHh-cCCCEEEeccCCCCCCCCCCceEecccHHHHHHHHHHHHH
Confidence 4688889999999999877542 256666766554 6999998 87766678999999999999999999999987
Q ss_pred hc
Q 015250 398 SF 399 (410)
Q Consensus 398 ~~ 399 (410)
.+
T Consensus 374 ~~ 375 (376)
T PRK07473 374 TL 375 (376)
T ss_pred hc
Confidence 54
No 23
>PRK07338 hypothetical protein; Provisional
Probab=95.90 E-value=0.015 Score=59.41 Aligned_cols=78 Identities=15% Similarity=0.055 Sum_probs=62.7
Q ss_pred CHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEE-eccccccccchhhhcCHHHHHHHHHHHHHHH
Q 015250 318 SGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVD-CGIAQLSMHSVREICGTEDIDIAYRHFKAFY 396 (410)
Q Consensus 318 ~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~-igiP~ryMHS~~E~~~~~D~~~~~~ll~af~ 396 (410)
++.+.+.+++.+++.|++..... .+|+|++.+... .||||++ +|.---.+|++.|-+.++|+...++++..++
T Consensus 321 ~~~l~~~~~~~~~~~g~~~~~~~-----~~g~tDa~~~~~-~giP~v~~~Gpg~~~~H~~~E~v~i~~l~~~~~~~~~~l 394 (402)
T PRK07338 321 QQRLFEAVQACGAALGLTIDWKD-----SGGVCDGNNLAA-AGLPVVDTLGVRGGNIHSEDEFVILDSLVERAQLSALIL 394 (402)
T ss_pred hHHHHHHHHHHHHHcCCCccccc-----CCccchHHHHhh-cCCCeEeccCCCCCCCCCccceEehhhHHHHHHHHHHHH
Confidence 45788999999999998876532 356666655543 7999995 7776567899999999999999999999999
Q ss_pred hhccc
Q 015250 397 ESFSS 401 (410)
Q Consensus 397 ~~~~~ 401 (410)
..|..
T Consensus 395 ~~~~~ 399 (402)
T PRK07338 395 MRLAQ 399 (402)
T ss_pred HHHhc
Confidence 88753
No 24
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=95.87 E-value=0.013 Score=60.51 Aligned_cols=78 Identities=14% Similarity=-0.006 Sum_probs=62.0
Q ss_pred cCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHHHH
Q 015250 317 TSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFY 396 (410)
Q Consensus 317 t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af~ 396 (410)
.+..+.+.+++.+++.+++..... ..|+|++.+.. ..|+|++.+|.-...+|++.|.+.++|++.+++++..++
T Consensus 330 ~~~~lv~~~~~a~~~~G~~~~~~~-----~~ggtDa~~~~-~~Gip~~~~G~G~~~aHt~dE~v~i~~l~~~~~~~~~li 403 (410)
T TIGR01882 330 KVMEIVDIAKQAMENLGIEPKISP-----IRGGTDGSQLS-YMGLPTPNIFAGGENMHGRFEYISVDNMVKAVDVIVEIA 403 (410)
T ss_pred CCHHHHHHHHHHHHHhCCCCcccc-----cceechHHHHH-hCCCCCCeEcCCcccCcCCceEEEHHHHHHHHHHHHHHH
Confidence 467888888888888876543321 24667776654 479999999997777999999999999999999999999
Q ss_pred hhcc
Q 015250 397 ESFS 400 (410)
Q Consensus 397 ~~~~ 400 (410)
+.+.
T Consensus 404 ~~~~ 407 (410)
T TIGR01882 404 KLNE 407 (410)
T ss_pred HHHh
Confidence 8664
No 25
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=95.83 E-value=0.023 Score=58.59 Aligned_cols=77 Identities=14% Similarity=0.050 Sum_probs=60.9
Q ss_pred cCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEecccccc--ccchhhhcCHHHHHHHHHHHHH
Q 015250 317 TSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLS--MHSVREICGTEDIDIAYRHFKA 394 (410)
Q Consensus 317 t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ry--MHS~~E~~~~~D~~~~~~ll~a 394 (410)
.|..+.+.+++.+++.+.+.+... .+|+|++.+.. .|+|++.+..|... +|++.|.++.+++..+++++..
T Consensus 332 ~d~~lv~~l~~a~~~~g~~~~~~~-----~~g~tDa~~~~--~~iP~~~~~gp~~~~~~H~~dE~v~i~~l~~~~~v~~~ 404 (413)
T PRK09290 332 FDPGLVAALEEAAERLGLSYRRLP-----SGAGHDAQILA--AVVPTAMIFVPSVGGISHNPAEFTSPEDCAAGANVLLH 404 (413)
T ss_pred CCHHHHHHHHHHHHHcCCCccccC-----CccchHHHHHh--ccCCEEEEEeccCCCCCCCccccCCHHHHHHHHHHHHH
Confidence 467888999999998887755422 24556665543 47999888888765 8999999999999999999999
Q ss_pred HHhhcc
Q 015250 395 FYESFS 400 (410)
Q Consensus 395 f~~~~~ 400 (410)
++..+.
T Consensus 405 ~l~~l~ 410 (413)
T PRK09290 405 ALLELA 410 (413)
T ss_pred HHHHHh
Confidence 988764
No 26
>PRK08652 acetylornithine deacetylase; Provisional
Probab=95.82 E-value=0.016 Score=57.71 Aligned_cols=78 Identities=19% Similarity=0.081 Sum_probs=60.7
Q ss_pred cCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEecccc-ccccchhhhcCHHHHHHHHHHHHHH
Q 015250 317 TSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQ-LSMHSVREICGTEDIDIAYRHFKAF 395 (410)
Q Consensus 317 t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~-ryMHS~~E~~~~~D~~~~~~ll~af 395 (410)
.|..+.+.+.+.+++.|++.+.... +|+|++.... ..|+|++.+|.-. ..+|++.|-+.++|+...++++..+
T Consensus 267 ~~~~lv~~l~~a~~~~g~~~~~~~~-----~g~tDa~~~~-~~gip~v~~Gpg~~~~~H~~nE~i~i~~l~~~~~~l~~~ 340 (347)
T PRK08652 267 EDEEIVQLLEKAMKEVGLEPEFTVM-----RSWTDAINFR-YNGTKTVVWGPGELDLCHTKFERIDVREVEKAKEFLKAL 340 (347)
T ss_pred CCCHHHHHHHHHHHHhCCCCCcCcC-----CccchhHHHH-HCCCCEEEECCCchhhcCCCCceeeHHHHHHHHHHHHHH
Confidence 3678889999999988988655332 3556664443 3699999999433 3689999999999999999999999
Q ss_pred Hhhcc
Q 015250 396 YESFS 400 (410)
Q Consensus 396 ~~~~~ 400 (410)
++.+-
T Consensus 341 ~~~~~ 345 (347)
T PRK08652 341 NEILL 345 (347)
T ss_pred HHHHh
Confidence 97653
No 27
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=95.72 E-value=0.026 Score=57.08 Aligned_cols=76 Identities=20% Similarity=0.316 Sum_probs=60.3
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHHHH
Q 015250 318 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFY 396 (410)
Q Consensus 318 ~~~~~~~l~~~A~~-~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af~ 396 (410)
|..+.+.+++.+++ .|.+.+... .+|+|++.+... .|+|++.+|..-..+|++.|-+.++|+..+++++..++
T Consensus 294 ~~~~~~~~~~a~~~~~g~~~~~~~-----~~g~~d~~~~~~-~g~p~~~~Gp~~~~~H~~~E~i~i~~l~~~~~~~~~~l 367 (370)
T TIGR01246 294 DGKLIDKAREAIEETNGIKPELST-----GGGTSDGRFIAL-MGAEVVEFGPVNATIHKVNECVSIEDLEKLSDVYQDLL 367 (370)
T ss_pred CCHHHHHHHHHHHHHhCCCCceec-----CCCCchHHHHHH-cCCCEEEecCCcccCCCCCceeEHHHHHHHHHHHHHHH
Confidence 55677777777765 687766532 356677765543 69999999999888999999999999999999999998
Q ss_pred hhc
Q 015250 397 ESF 399 (410)
Q Consensus 397 ~~~ 399 (410)
.+|
T Consensus 368 ~~~ 370 (370)
T TIGR01246 368 ENL 370 (370)
T ss_pred HhC
Confidence 764
No 28
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=95.59 E-value=0.037 Score=57.04 Aligned_cols=78 Identities=12% Similarity=0.066 Sum_probs=60.8
Q ss_pred ccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEecccccc--ccchhhhcCHHHHHHHHHHHH
Q 015250 316 ATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLS--MHSVREICGTEDIDIAYRHFK 393 (410)
Q Consensus 316 ~t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ry--MHS~~E~~~~~D~~~~~~ll~ 393 (410)
..|+.+.+.+.+.+++.+++.+... .+|+|++.+... .| |++.+..|... +|++.|.++.+|+...++++.
T Consensus 332 ~~~~~l~~~l~~~~~~~g~~~~~~~-----~~g~tDa~~~~~-~g-p~~~~~gp~~~~~aHs~dE~v~i~~l~~~~~i~~ 404 (414)
T PRK12890 332 PCDPALVDAVEAAAARLGYPSRRMP-----SGAGHDAAAIAR-IG-PSAMIFVPCRGGISHNPEEAMDPEDLAAGARVLL 404 (414)
T ss_pred CCCHHHHHHHHHHHHHcCCCceecC-----CcccHHHHHHHh-hC-CEEEEEecCCCCCCCCcCccCCHHHHHHHHHHHH
Confidence 3478899999999999998876532 245566654443 46 77777778654 899999999999999999999
Q ss_pred HHHhhcc
Q 015250 394 AFYESFS 400 (410)
Q Consensus 394 af~~~~~ 400 (410)
.++..+.
T Consensus 405 ~ll~~l~ 411 (414)
T PRK12890 405 DAVLRLD 411 (414)
T ss_pred HHHHHHh
Confidence 9998774
No 29
>PRK06837 acetylornithine deacetylase; Provisional
Probab=95.53 E-value=0.032 Score=57.81 Aligned_cols=79 Identities=14% Similarity=0.137 Sum_probs=62.2
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHHHH
Q 015250 318 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFY 396 (410)
Q Consensus 318 ~~~~~~~l~~~A~~-~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af~ 396 (410)
|..+...+++.+++ .|.+.+.... +|+|++.+.....|+|++.+|..-..+|++.|-++++|+..+++++..++
T Consensus 344 ~~~~~~~~~~a~~~~~g~~~~~~~~-----~g~tDa~~~~~~~gip~v~~Gp~~~~~H~~nE~i~i~~l~~~~~~~~~~l 418 (427)
T PRK06837 344 GSEAEAALARAHAAVFGGPLRSFVT-----TAYTDTRFYGLYYGIPALCYGPSGEGIHGFDERVDLESVRKVTKTIALFV 418 (427)
T ss_pred CCHHHHHHHHHHHHHhCCCCeeeEE-----eeccchHHHhccCCCCEEEECCCCCccCCCCceEEHHHHHHHHHHHHHHH
Confidence 44677777777776 7888776543 45566655543479999999988778999999999999999999999999
Q ss_pred hhccc
Q 015250 397 ESFSS 401 (410)
Q Consensus 397 ~~~~~ 401 (410)
..+-.
T Consensus 419 ~~~~~ 423 (427)
T PRK06837 419 AEWCG 423 (427)
T ss_pred HHHhC
Confidence 77644
No 30
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=95.39 E-value=0.075 Score=55.20 Aligned_cols=96 Identities=14% Similarity=0.105 Sum_probs=71.4
Q ss_pred cCC--CccEEEEc---CCCccccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccc-cccc
Q 015250 300 EMQ--KGLVIKHN---ANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIA-QLSM 373 (410)
Q Consensus 300 ~LG--~Gpvi~~~---~~~~~~t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP-~ryM 373 (410)
.+| .++-+... +...+-.+..+....++..++.+|+-.+.++ ++|++.|.+.. -|+||..|++- ...+
T Consensus 312 ~~g~~~~~~~~~~~~Yp~~~~~~~~~iv~~a~~a~~~l~~~p~v~~i----~gGtd~~~is~--~g~p~~~i~~Gp~~n~ 385 (414)
T COG2195 312 SLGKLAGAELEVKDSYPGWKIKPDSPLVDLAKKAYKELGIKPKVKPI----HGGTDGGVLSF--KGLPTPNISTGPGENP 385 (414)
T ss_pred HhhhccceEEEEeccccCcCCCCCchHHHHHHHHHHHhCCCceEEEe----ecccchhhhhc--cCCCCceEecccccCC
Confidence 466 66666653 2334556788999999999999999666665 35555554444 45555555555 9999
Q ss_pred cchhhhcCHHHHHHHHHHHHHHHhhccc
Q 015250 374 HSVREICGTEDIDIAYRHFKAFYESFSS 401 (410)
Q Consensus 374 HS~~E~~~~~D~~~~~~ll~af~~~~~~ 401 (410)
||+.|-+++.-++.+++++..+++.+..
T Consensus 386 Hs~~E~v~I~s~ek~~~~l~~l~~~~~~ 413 (414)
T COG2195 386 HSPDEFVSIESMEKAVQVLVELLKLAAA 413 (414)
T ss_pred CCccceeehHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999987653
No 31
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=95.35 E-value=0.051 Score=55.26 Aligned_cols=75 Identities=13% Similarity=0.085 Sum_probs=60.6
Q ss_pred cCHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHHH
Q 015250 317 TSGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAF 395 (410)
Q Consensus 317 t~~~~~~~l~~~A~~-~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af 395 (410)
.|..+.+.+.+.+++ .|.+.+.... +|+|.+.+.. ..|+|++.+|..--.+|++.|-+.++|++.+++++..+
T Consensus 323 ~~~~~v~~l~~a~~~~~g~~~~~~~~-----~g~td~~~~~-~~gip~v~~Gp~~~~~H~~nE~v~i~~l~~~~~~~~~~ 396 (400)
T PRK13983 323 PDSEIVKKLKRAIKEVRGIEPKVGGI-----GGGTVAAFLR-KKGYPAVVWSTLDETAHQPNEYAKISNLIEDAKVFALL 396 (400)
T ss_pred CCcHHHHHHHHHHHHhcCCCceeeee-----cCcHHHHHHH-HcCCCEEEeCCccccCCCCCceeeHHHHHHHHHHHHHH
Confidence 466777888887776 6887776542 4667776654 47999999998888899999999999999999999988
Q ss_pred Hh
Q 015250 396 YE 397 (410)
Q Consensus 396 ~~ 397 (410)
+.
T Consensus 397 ~~ 398 (400)
T PRK13983 397 LL 398 (400)
T ss_pred Hh
Confidence 75
No 32
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=95.32 E-value=0.041 Score=54.96 Aligned_cols=79 Identities=14% Similarity=0.050 Sum_probs=61.5
Q ss_pred cCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEecccc-ccccchhhhcCHHHHHHHHHHHHHH
Q 015250 317 TSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQ-LSMHSVREICGTEDIDIAYRHFKAF 395 (410)
Q Consensus 317 t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~-ryMHS~~E~~~~~D~~~~~~ll~af 395 (410)
.+..+.+.+++.+++.+.+..... .+|+|++.+.....|+|++.+|.-. ..+|++.|-++++|++..++++..+
T Consensus 255 ~~~~lv~~~~~a~~~~~~~~~~~~-----~~g~tD~~~~~~~~g~p~v~~Gpg~~~~aH~~nE~v~i~~l~~~~~~~~~~ 329 (336)
T TIGR01902 255 RNNPLVRAFVRAIRKQGMKPRLKK-----KTGTSDMNILAPIWTVPMVAYGPGDSTLDHTPQEKISLAEYLIGIKTLMLA 329 (336)
T ss_pred CCCHHHHHHHHHHHHcCCCeEEee-----ccccCccceeccccCCCeEEECCCCcccCCCCcceeEHHHHHHHHHHHHHH
Confidence 466788889999998887655433 2455666655444599999999653 3589999999999999999999999
Q ss_pred Hhhcc
Q 015250 396 YESFS 400 (410)
Q Consensus 396 ~~~~~ 400 (410)
+..+.
T Consensus 330 l~~l~ 334 (336)
T TIGR01902 330 IEELW 334 (336)
T ss_pred HHHHh
Confidence 98764
No 33
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=95.07 E-value=0.06 Score=54.13 Aligned_cols=77 Identities=14% Similarity=0.008 Sum_probs=56.4
Q ss_pred CHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEecccc-ccccchhhhcCHHHHHHHHHHHHHHH
Q 015250 318 SGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQ-LSMHSVREICGTEDIDIAYRHFKAFY 396 (410)
Q Consensus 318 ~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~-ryMHS~~E~~~~~D~~~~~~ll~af~ 396 (410)
+..+.+.+++..++.+.+..... .+|+|++.+.....|+|++.+|... ..+|++.|-+.++|+..+++++..++
T Consensus 271 ~~~~~~~l~~~~~~~~~~~~~~~-----~~g~tD~~~~~~~~gip~v~~Gpg~~~~~H~~dE~i~i~~l~~~~~~~~~~~ 345 (348)
T PRK04443 271 RTPLARAFRVAIREAGGTPRLKR-----KTGTSDMNVVAPAWGCPMVAYGPGDSDLDHTPDEHLPLAEYLRAIAVLTDVL 345 (348)
T ss_pred CCHHHHHHHHHHHHhcCCcceec-----cccCCcHHHHhhhcCCCEEEECCCCccccCCCcccccHHHHHHHHHHHHHHH
Confidence 45677888888888755322211 2466665544433699999999764 45799999999999999999999998
Q ss_pred hhc
Q 015250 397 ESF 399 (410)
Q Consensus 397 ~~~ 399 (410)
..+
T Consensus 346 ~~l 348 (348)
T PRK04443 346 ERL 348 (348)
T ss_pred hhC
Confidence 754
No 34
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=95.07 E-value=0.069 Score=54.64 Aligned_cols=78 Identities=14% Similarity=0.111 Sum_probs=59.3
Q ss_pred CHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccc---cccccchhhhcCHHHHHHHHHHHHH
Q 015250 318 SGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIA---QLSMHSVREICGTEDIDIAYRHFKA 394 (410)
Q Consensus 318 ~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP---~ryMHS~~E~~~~~D~~~~~~ll~a 394 (410)
+..+...+++++++.+.+.+... .+|+|++.+.. ..|||++..|.- -...|++.|-++++|+..+++++..
T Consensus 319 ~~~lv~~l~~a~~~~~~~~~~~~-----~~g~tDa~~~~-~~gip~v~fgp~~~~~~~aH~~dE~i~i~~l~~~~~~~~~ 392 (400)
T TIGR01880 319 SNPWWVAFKDAVKEMGCTFKPEI-----LPGSTDSRYIR-AAGVPALGFSPMNNTPVLLHDHNEFLNEAVFLRGIEIYQT 392 (400)
T ss_pred CCHHHHHHHHHHHHcCCeeccee-----ecCcchHHHHH-hCCCCeEEECCccCCcccccCCCCceEHHHHHHHHHHHHH
Confidence 45677888999999876655432 24667776654 379999866532 1258999999999999999999999
Q ss_pred HHhhccc
Q 015250 395 FYESFSS 401 (410)
Q Consensus 395 f~~~~~~ 401 (410)
++..+..
T Consensus 393 ~l~~~~~ 399 (400)
T TIGR01880 393 LISALAS 399 (400)
T ss_pred HHHHhhc
Confidence 9988764
No 35
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=94.82 E-value=0.073 Score=53.92 Aligned_cols=77 Identities=17% Similarity=0.088 Sum_probs=58.7
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChH-HHHhcCCCCcEEEeccc-cccccchhhhcCHHHHHHHHHHHHH
Q 015250 318 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIG-PILASGVGIRTVDCGIA-QLSMHSVREICGTEDIDIAYRHFKA 394 (410)
Q Consensus 318 ~~~~~~~l~~~A~~-~~Ip~Q~~~~~~d~~~G~t~g-~i~~s~~Gi~ti~igiP-~ryMHS~~E~~~~~D~~~~~~ll~a 394 (410)
+..+.+.+++.+++ .|.+..... .+|+|++ .+.....|+|++.+|.- ...+|++.|-++.+|+..+++++..
T Consensus 296 ~~~l~~~~~~~~~~~~g~~~~~~~-----~~g~tD~~~~~~~~~~ip~i~~Gpg~~~~~H~~~E~i~~~~l~~~~~~~~~ 370 (377)
T PRK08588 296 DSKLVQLAKDVAKSYVGQDIPLSA-----IPGATDASSFLKKKPDFPVIIFGPGNNLTAHQVDEYVEKDMYLKFIDIYKE 370 (377)
T ss_pred CCHHHHHHHHHHHHhhCCCCceec-----CCCcccHHHHhhhcCCCCEEEECCCCCccCCCCCceeEHHHHHHHHHHHHH
Confidence 45788888888877 677665432 2355555 44433468999999976 5679999999999999999999999
Q ss_pred HHhhc
Q 015250 395 FYESF 399 (410)
Q Consensus 395 f~~~~ 399 (410)
++.++
T Consensus 371 ~~~~~ 375 (377)
T PRK08588 371 IIIQY 375 (377)
T ss_pred HHHHH
Confidence 98765
No 36
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=94.49 E-value=0.11 Score=52.58 Aligned_cols=75 Identities=16% Similarity=0.250 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHHHHh
Q 015250 319 GVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYE 397 (410)
Q Consensus 319 ~~~~~~l~~~A~~-~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af~~ 397 (410)
..+.+.+++.+++ .|.+.+... .+|+|++.+... .|+|++.+|.--...|++.|-++++|+...++++..++.
T Consensus 298 ~~~~~~l~~a~~~~~g~~~~~~~-----~~g~tda~~~~~-~g~p~v~~Gp~~~~~H~~~E~i~~~~l~~~~~~~~~~~~ 371 (375)
T PRK13009 298 GKLVDAVVAAIEAVTGITPELST-----SGGTSDARFIAD-YGAQVVEFGPVNATIHKVNECVSVADLEKLTRIYERILE 371 (375)
T ss_pred cHHHHHHHHHHHHHhCCCceeec-----cCCCccHHHHHH-cCCCeEEeccCcccCCCCCCcEEHHHHHHHHHHHHHHHH
Confidence 4566777777765 688766543 256666765544 799999999665679999999999999999999999987
Q ss_pred hc
Q 015250 398 SF 399 (410)
Q Consensus 398 ~~ 399 (410)
.|
T Consensus 372 ~~ 373 (375)
T PRK13009 372 RL 373 (375)
T ss_pred HH
Confidence 65
No 37
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=94.35 E-value=0.11 Score=53.68 Aligned_cols=78 Identities=13% Similarity=0.109 Sum_probs=62.0
Q ss_pred cCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccc--cccchhhhcCHHHHHHHHHHHHH
Q 015250 317 TSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQL--SMHSVREICGTEDIDIAYRHFKA 394 (410)
Q Consensus 317 t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~r--yMHS~~E~~~~~D~~~~~~ll~a 394 (410)
.|..+.+.+++.|++.+.++.... .+|++++.+... .+|++.+-+|++ .+|++.|-++.+|+...++++..
T Consensus 325 ~d~~lv~~l~~a~~~~~~~~~~~~-----sggg~Da~~~~~--~vP~~~ifgp~~~g~~H~p~E~v~~e~l~~g~~vl~~ 397 (406)
T TIGR03176 325 MNKEIVAIIEQLAKAEKLNYRLMH-----SGAGHDAQIFAP--RVPTAMIFVPSIGGISHNPAERTNIEDLVEGVKTLAD 397 (406)
T ss_pred CCHHHHHHHHHHHHHcCCCceecC-----cccHHHHHHHHH--HCCEEEEEEeCCCCCCCCccccCCHHHHHHHHHHHHH
Confidence 377899999999999888755421 356666655443 399999988874 57999999999999999999999
Q ss_pred HHhhccc
Q 015250 395 FYESFSS 401 (410)
Q Consensus 395 f~~~~~~ 401 (410)
++..+..
T Consensus 398 ~l~~l~~ 404 (406)
T TIGR03176 398 MLYELAY 404 (406)
T ss_pred HHHHHhc
Confidence 9987743
No 38
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=94.34 E-value=0.099 Score=53.72 Aligned_cols=78 Identities=13% Similarity=-0.002 Sum_probs=57.9
Q ss_pred ccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccc--cccchhhhcCHHHHHHHHHHHH
Q 015250 316 ATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQL--SMHSVREICGTEDIDIAYRHFK 393 (410)
Q Consensus 316 ~t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~r--yMHS~~E~~~~~D~~~~~~ll~ 393 (410)
..|+.+.+.+++.+++.+.+.+... .+|+|++.+... . +|++.+..|.. .+|++.|.++.+|+..+++++.
T Consensus 330 ~~d~~l~~~l~~~~~~~g~~~~~~~-----~~g~tD~~~~~~-~-~p~~v~~gp~~~~~~Hs~dE~v~i~~l~~~~~i~~ 402 (412)
T PRK12893 330 PFDPALVALVEAAAEALGLSHMRMV-----SGAGHDAMFLAR-V-APAAMIFVPCRGGISHNEAEDTEPADLAAGANVLL 402 (412)
T ss_pred CCCHHHHHHHHHHHHHcCCCccccC-----CccHHHHHHHHh-h-CCEEEEEeecCCCCCCCccccCCHHHHHHHHHHHH
Confidence 3477889999999998888765422 245566655443 3 56555566653 4799999999999999999999
Q ss_pred HHHhhcc
Q 015250 394 AFYESFS 400 (410)
Q Consensus 394 af~~~~~ 400 (410)
.++..+.
T Consensus 403 ~ll~~~~ 409 (412)
T PRK12893 403 HAVLELA 409 (412)
T ss_pred HHHHHhh
Confidence 9988763
No 39
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=94.33 E-value=0.13 Score=54.50 Aligned_cols=81 Identities=14% Similarity=0.124 Sum_probs=64.7
Q ss_pred ccCHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHH
Q 015250 316 ATSGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKA 394 (410)
Q Consensus 316 ~t~~~~~~~l~~~A~~-~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~a 394 (410)
..|..+...+.++.++ .|-+-+..+. .+|.+.|-+.....|||++.+|--...|||+.|-+++++++.+.+++..
T Consensus 402 ~~ds~lv~~l~~~y~e~~G~~~~~~~i----haglEcG~~~~~~p~i~~VsfGP~~~~~HspdE~v~I~s~~~~~~~l~~ 477 (485)
T PRK15026 402 DANSPVMHLVRETYQRLFNKTPNIQII----HAGLECGLFKKPYPEMDMVSIGPTITGPHSPDEQVHIESVGHYWTLLTE 477 (485)
T ss_pred CCCCHHHHHHHHHHHHHHCCCCeEEEE----EEEehHHHHHhhCCCCCEEEECCCCCCCCCCCcEEEhHHHHHHHHHHHH
Confidence 4455667777777666 4556665543 3577777777666899999999999999999999999999999999999
Q ss_pred HHhhcc
Q 015250 395 FYESFS 400 (410)
Q Consensus 395 f~~~~~ 400 (410)
|++.+.
T Consensus 478 ~l~~~~ 483 (485)
T PRK15026 478 LLKEIP 483 (485)
T ss_pred HHHhhh
Confidence 999873
No 40
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=94.31 E-value=0.11 Score=52.89 Aligned_cols=77 Identities=16% Similarity=0.216 Sum_probs=59.4
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEecccc-ccccchhhhcCHHHHHHHHHHHHHH
Q 015250 318 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQ-LSMHSVREICGTEDIDIAYRHFKAF 395 (410)
Q Consensus 318 ~~~~~~~l~~~A~~-~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~-ryMHS~~E~~~~~D~~~~~~ll~af 395 (410)
+..+.+.+++.+++ .|++...... +|+|++.+.. +.|+|++.+|.-. ..+|++.|-++.+++...++++.++
T Consensus 313 ~~~l~~~~~~a~~~~~g~~~~~~~~-----~g~tD~~~~~-~~gip~v~~Gpg~~~~~H~~~E~i~~~~l~~~~~i~~~~ 386 (394)
T PRK08651 313 DSELVKALREAIREVLGVEPKKTIS-----LGGTDARFFG-AKGIPTVVYGPGELELAHAPDEYVEVKDVEKAAKVYEEV 386 (394)
T ss_pred CCHHHHHHHHHHHHHhCCCCceeee-----cCcccHHHHh-hCCCcEEEECCCChHhcCCCCceeEHHHHHHHHHHHHHH
Confidence 44678888888887 7877654432 4666665544 5799999887754 3699999999999999999999999
Q ss_pred Hhhcc
Q 015250 396 YESFS 400 (410)
Q Consensus 396 ~~~~~ 400 (410)
+..+.
T Consensus 387 i~~l~ 391 (394)
T PRK08651 387 LKRLA 391 (394)
T ss_pred HHHhh
Confidence 98764
No 41
>PRK06915 acetylornithine deacetylase; Validated
Probab=94.22 E-value=0.12 Score=53.19 Aligned_cols=81 Identities=11% Similarity=-0.021 Sum_probs=61.0
Q ss_pred cCHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccc-cccccchhhhcCHHHHHHHHHHHHH
Q 015250 317 TSGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIA-QLSMHSVREICGTEDIDIAYRHFKA 394 (410)
Q Consensus 317 t~~~~~~~l~~~A~~-~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP-~ryMHS~~E~~~~~D~~~~~~ll~a 394 (410)
.|..+...+++++++ .|.+..... .+|+|++.......|+|++.+|.. ...+|++.|-++.+|+..+++++.+
T Consensus 338 ~d~~lv~~l~~a~~~~~G~~~~~~~-----~~g~tD~~~~~~~~giP~v~fGpg~~~~aH~~dE~v~~~~l~~~~~~~~~ 412 (422)
T PRK06915 338 ENHPLMTTLEHNFVEIEGNKPIIEA-----SPWGTDGGLLTQIAGVPTIVFGPGETKVAHYPNEYIEVDKMIAAAKIIAL 412 (422)
T ss_pred CCCHHHHHHHHHHHHHhCCCCeece-----eeeeccHHHHhccCCCCEEEECCCCccccCCCCceeEHHHHHHHHHHHHH
Confidence 366888888998888 477655432 235555654444349999998875 3468999999999999999999999
Q ss_pred HHhhcccc
Q 015250 395 FYESFSSI 402 (410)
Q Consensus 395 f~~~~~~~ 402 (410)
++.++-..
T Consensus 413 ll~~~~~~ 420 (422)
T PRK06915 413 TLLDWCEV 420 (422)
T ss_pred HHHHHhCC
Confidence 99876543
No 42
>PRK08596 acetylornithine deacetylase; Validated
Probab=93.96 E-value=0.16 Score=52.51 Aligned_cols=80 Identities=18% Similarity=0.073 Sum_probs=57.3
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEecccc-ccccchhhhcCHHHHHHHHHHHHHH
Q 015250 318 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQ-LSMHSVREICGTEDIDIAYRHFKAF 395 (410)
Q Consensus 318 ~~~~~~~l~~~A~~-~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~-ryMHS~~E~~~~~D~~~~~~ll~af 395 (410)
+..+...+.+.+++ .|.+..... .+|+|++.+... .|+|++.+|.-- ..+|++.|-+.++|+..+++++.++
T Consensus 338 ~~~~v~~l~~a~~~~~g~~~~~~~-----~~g~tD~~~~~~-~gip~v~~Gpg~~~~~H~~~E~v~i~~~~~~~~~~~~~ 411 (421)
T PRK08596 338 EHPAVKTLSSAHESVLSKNAILDM-----STTVTDGGWFAE-FGIPAVIYGPGTLEEAHSVNEKVEIEQLIEYTKVITAF 411 (421)
T ss_pred CchHHHHHHHHHHHHhCCCCeeeE-----Eeeecchhhhhh-cCCCEEEECCCcccccCCCCceEEHHHHHHHHHHHHHH
Confidence 33444445555554 577765443 245566655543 799999999753 4689999999999999999999999
Q ss_pred Hhhccccc
Q 015250 396 YESFSSID 403 (410)
Q Consensus 396 ~~~~~~~~ 403 (410)
+..+-..+
T Consensus 412 l~~~~~~~ 419 (421)
T PRK08596 412 IYEWCHTK 419 (421)
T ss_pred HHHHhCCC
Confidence 98776543
No 43
>PRK13004 peptidase; Reviewed
Probab=93.84 E-value=0.078 Score=54.35 Aligned_cols=78 Identities=21% Similarity=0.023 Sum_probs=56.9
Q ss_pred CHHHHHHHHHHHHHC-CCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEecccc-ccccchhhhcCHHHHHHHHHHHHHH
Q 015250 318 SGVTAFLFKEIAKLH-NLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQ-LSMHSVREICGTEDIDIAYRHFKAF 395 (410)
Q Consensus 318 ~~~~~~~l~~~A~~~-~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~-ryMHS~~E~~~~~D~~~~~~ll~af 395 (410)
+..+...+.+.+++. +.+..... ..++|.|.......|+|++.+|.-. -.+|++.|-+.++|+...++++..+
T Consensus 317 ~~~~~~~l~~a~~~~~g~~~~~~~-----~~~~td~~~~~~~~Gip~v~~Gpg~~~~aH~~nE~i~i~~l~~~~~~~~~~ 391 (399)
T PRK13004 317 DHEFVKAAVEAYKGLFGKAPEVDK-----WTFSTNGVSIAGRAGIPTIGFGPGKEPLAHAPNEYTWKEQLVKAAAMYAAI 391 (399)
T ss_pred CCHHHHHHHHHHHHHhCCCCeecc-----cccccCCeEEehhcCCCEEEECCCcccccCCCCceeEHHHHHHHHHHHHHH
Confidence 556777778877765 77554322 1344444333344799999999644 3599999999999999999999999
Q ss_pred Hhhcc
Q 015250 396 YESFS 400 (410)
Q Consensus 396 ~~~~~ 400 (410)
+..|-
T Consensus 392 ~~~~~ 396 (399)
T PRK13004 392 PKSLL 396 (399)
T ss_pred HHHHh
Confidence 98764
No 44
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=93.66 E-value=0.15 Score=52.28 Aligned_cols=76 Identities=11% Similarity=0.020 Sum_probs=58.3
Q ss_pred cCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccc--cccchhhhcCHHHHHHHHHHHHH
Q 015250 317 TSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQL--SMHSVREICGTEDIDIAYRHFKA 394 (410)
Q Consensus 317 t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~r--yMHS~~E~~~~~D~~~~~~ll~a 394 (410)
.|..+.+.+++.+++.+.+..... .+|+|++.+... . +|++.+..|.. .+|++.|-++.+++...++++..
T Consensus 332 ~d~~lv~~~~~a~~~~g~~~~~~~-----~~g~tDa~~~~~-~-ip~~~~~gp~~~~~~H~~~E~v~i~~l~~~~~il~~ 404 (412)
T PRK12892 332 CDAALVDALRAAAEAAGGPYLEMP-----SGAGHDAQNMAR-I-APSAMLFVPSKGGISHNPAEDTSPADLAQGARVLAD 404 (412)
T ss_pred CCHHHHHHHHHHHHHcCCCccccC-----cchHHHHHHHHh-H-CCEEEEEeccCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 467889999999999888765322 246666655443 3 89877777753 48999999999999999999999
Q ss_pred HHhhc
Q 015250 395 FYESF 399 (410)
Q Consensus 395 f~~~~ 399 (410)
++..+
T Consensus 405 ~l~~~ 409 (412)
T PRK12892 405 TLRRL 409 (412)
T ss_pred HHHHh
Confidence 98765
No 45
>PRK09133 hypothetical protein; Provisional
Probab=93.45 E-value=0.16 Score=53.38 Aligned_cols=77 Identities=13% Similarity=0.105 Sum_probs=58.0
Q ss_pred CHHHHHHHHHHHHHC--CCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEec---cc--cccccchhhhcCHHHHHHHHH
Q 015250 318 SGVTAFLFKEIAKLH--NLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCG---IA--QLSMHSVREICGTEDIDIAYR 390 (410)
Q Consensus 318 ~~~~~~~l~~~A~~~--~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~ig---iP--~ryMHS~~E~~~~~D~~~~~~ 390 (410)
+..+.+.+++++++. ++|..... .+|+|++.+.. +.|+|++.++ .| ...+|++.|-++++|+..+++
T Consensus 386 ~~~l~~~l~~~~~~~~~g~~~~~~~-----~~ggtDa~~~~-~~gip~~~~~~i~gp~~~~~aH~~dE~v~i~~l~~~~~ 459 (472)
T PRK09133 386 RPDIMKAVEKLTAAMWPGVPVIPSM-----STGATDGRYLR-AAGIPTYGVSGLFGDPDDTFAHGLNERIPVASFYEGRD 459 (472)
T ss_pred CcHHHHHHHHHHHHHCCCCceeccc-----cccccchHHHH-hcCCCceeecCcccCcccccCCCCCCceeHHHHHHHHH
Confidence 567888888888876 77765432 24666676654 4799998632 22 246899999999999999999
Q ss_pred HHHHHHhhcc
Q 015250 391 HFKAFYESFS 400 (410)
Q Consensus 391 ll~af~~~~~ 400 (410)
++..++..+.
T Consensus 460 ~l~~~l~~l~ 469 (472)
T PRK09133 460 FLYELVKDLA 469 (472)
T ss_pred HHHHHHHHhh
Confidence 9999998764
No 46
>PRK08737 acetylornithine deacetylase; Provisional
Probab=93.15 E-value=0.2 Score=51.03 Aligned_cols=73 Identities=11% Similarity=0.111 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccc-cccccchhhhcCHHHHHHHHHHHHHHHh
Q 015250 319 GVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIA-QLSMHSVREICGTEDIDIAYRHFKAFYE 397 (410)
Q Consensus 319 ~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP-~ryMHS~~E~~~~~D~~~~~~ll~af~~ 397 (410)
+.....+++++++.++|.-.. .+++|++.+.. ..||||+..|-= ...+|++.|-+.++++..+++++..++.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~------~~~~tDa~~~~-~~Gip~v~~GpG~~~~aHt~dE~i~i~~l~~~~~~~~~~~~ 362 (364)
T PRK08737 290 EERRLAARDVADALDLPIGNA------VDFWTEASLFS-AAGYTALVYGPGDIAQAHTADEFVTLDQLQRYAESVHRIIN 362 (364)
T ss_pred hHHHHHHHHHHhhhcCCCCce------eccccCHHHHH-HcCCCEEEECCCChhhccCCCcceeHHHHHHHHHHHHHHhc
Confidence 444455677777778775322 13466665554 479999999876 3579999999999999999999999875
Q ss_pred h
Q 015250 398 S 398 (410)
Q Consensus 398 ~ 398 (410)
.
T Consensus 363 ~ 363 (364)
T PRK08737 363 D 363 (364)
T ss_pred C
Confidence 3
No 47
>PRK07318 dipeptidase PepV; Reviewed
Probab=93.13 E-value=0.12 Score=54.33 Aligned_cols=75 Identities=16% Similarity=0.112 Sum_probs=56.1
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccc-cccchhhhcCHHHHHHHHHHHHHH
Q 015250 318 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQL-SMHSVREICGTEDIDIAYRHFKAF 395 (410)
Q Consensus 318 ~~~~~~~l~~~A~~-~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~r-yMHS~~E~~~~~D~~~~~~ll~af 395 (410)
+..+.+.+++.+++ .+.+.+.... +|+|++.+.. .|||.+.++.+.. .+|++.|-++++|+..+++++..+
T Consensus 388 d~~lv~~l~~a~~~~~g~~~~~~~~-----~ggtDa~~~~--~~i~~Gp~~pg~~~~aH~~dE~v~i~~l~~~~~v~~~~ 460 (466)
T PRK07318 388 DDPLVKTLLKVYEKQTGLKGEEQVI-----GGGTYARLLK--RGVAFGAMFPGSEDTMHQANEYIEIDDLIKAAAIYAEA 460 (466)
T ss_pred CCHHHHHHHHHHHHHhCCCCCeeEE-----cchHhHhhCC--CeEEeCCCCCCCCCCCcCCCcceeHHHHHHHHHHHHHH
Confidence 56778888888886 7888775432 4556665443 3777665555533 499999999999999999999999
Q ss_pred Hhhc
Q 015250 396 YESF 399 (410)
Q Consensus 396 ~~~~ 399 (410)
+..+
T Consensus 461 l~~~ 464 (466)
T PRK07318 461 IYEL 464 (466)
T ss_pred HHHH
Confidence 8876
No 48
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=92.82 E-value=0.34 Score=48.59 Aligned_cols=77 Identities=14% Similarity=0.097 Sum_probs=57.1
Q ss_pred CHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccc-cccchhhhcCHHHHHHHHHHHHHHH
Q 015250 318 SGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQL-SMHSVREICGTEDIDIAYRHFKAFY 396 (410)
Q Consensus 318 ~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~r-yMHS~~E~~~~~D~~~~~~ll~af~ 396 (410)
+..+.+.+.+.+++.+.+.+... .+|+|++.+.. +.|.|++..|.-.. .+|++.|-+.++|+..+++++..++
T Consensus 266 ~~~lv~~l~~a~~~~g~~~~~~~-----~~g~tD~~~~~-~~~~~~v~fGpg~~~~aH~~nE~i~i~~l~~~~~~~~~~i 339 (346)
T PRK00466 266 NNPVVKALMRALLKQNIKPRLVR-----KAGTSDMNILQ-KITTSIATYGPGNSMLEHTNQEKITLDEIYIAVKTYMLAI 339 (346)
T ss_pred CCHHHHHHHHHHHHhCCCceEEe-----cCCcCcHHHHH-HhCCCEEEECCCCcccccCCCceeeHHHHHHHHHHHHHHH
Confidence 45677777887888888766543 24556555443 35788888885433 3899999999999999999999999
Q ss_pred hhcc
Q 015250 397 ESFS 400 (410)
Q Consensus 397 ~~~~ 400 (410)
..+-
T Consensus 340 ~~l~ 343 (346)
T PRK00466 340 EELW 343 (346)
T ss_pred HHHH
Confidence 7663
No 49
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=92.71 E-value=0.19 Score=53.40 Aligned_cols=67 Identities=25% Similarity=0.260 Sum_probs=46.7
Q ss_pred CCceEEeccC----CcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCcccccccCCcchHHHHHHHHHhcCC
Q 015250 184 NNEFIFSGRL----DNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAH 259 (410)
Q Consensus 184 ~~~~i~gkal----Dnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~gA~~~~~p~~l~ri~~~~~~ 259 (410)
.++++.|++= |+..|+++++.+|++... ......++|++.||+|+.|++.....
T Consensus 101 ~~~~l~g~Gt~lgaD~k~gva~~l~~l~~~~~-------~~~~i~~l~t~dEE~G~~ga~~l~~~--------------- 158 (485)
T PRK15026 101 DGEWVKARGTTLGADNGIGMASALAVLADENV-------VHGPLEVLLTMTEEAGMDGAFGLQSN--------------- 158 (485)
T ss_pred cCCEEEeCCccccCccHHHHHHHHHHHHhCCC-------CCCCEEEEEEcccccCcHhHHHhhhc---------------
Confidence 3557755543 999999999998854321 13346778999999999888753211
Q ss_pred CCCChhHHHHHhhccceEEEecC
Q 015250 260 EHVSETSFECTIRQSFLVSADMA 282 (410)
Q Consensus 260 ~~~~~~~~~~~~~~s~~is~Dv~ 282 (410)
.+.++++|.+|-+
T Consensus 159 ----------~~~~~~~i~~e~~ 171 (485)
T PRK15026 159 ----------WLQADILINTDSE 171 (485)
T ss_pred ----------cCCcCEEEEeCCC
Confidence 1356899999976
No 50
>PRK06446 hypothetical protein; Provisional
Probab=92.38 E-value=0.28 Score=51.05 Aligned_cols=80 Identities=19% Similarity=0.181 Sum_probs=55.1
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEE--ecc--ccccccchhhhcCHHHHHHHHHHH
Q 015250 318 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVD--CGI--AQLSMHSVREICGTEDIDIAYRHF 392 (410)
Q Consensus 318 ~~~~~~~l~~~A~~-~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~--igi--P~ryMHS~~E~~~~~D~~~~~~ll 392 (410)
+..+.+.+.+.+++ .+.+-+... ..+|++.+.......|+|++. +|+ |-..+|++.|-+++++++.+++++
T Consensus 351 ~~~~v~~l~~a~~~~~g~~~~~~~----~~~g~~d~~~~~~~~gip~v~~~~g~g~~~~~~H~~dE~i~i~~l~~~~~~~ 426 (436)
T PRK06446 351 NSKVVKAMIESAKRVYGTEPVVIP----NSAGTQPMGLFVYKLGIRDIVSAIGVGGYYSNAHAPNENIRIDDYYKAIKHT 426 (436)
T ss_pred CCHHHHHHHHHHHHHhCCCCceec----CCCCcchHHHHHHHhCCCcceeecccCCCCcCCcCCCCCcCHHHHHHHHHHH
Confidence 44556666666654 366545432 134555544444447999875 443 457899999999999999999999
Q ss_pred HHHHhhccc
Q 015250 393 KAFYESFSS 401 (410)
Q Consensus 393 ~af~~~~~~ 401 (410)
..|++++..
T Consensus 427 ~~~~~~~~~ 435 (436)
T PRK06446 427 EEFLKLYST 435 (436)
T ss_pred HHHHHHhcC
Confidence 999987653
No 51
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=92.01 E-value=0.34 Score=52.70 Aligned_cols=79 Identities=11% Similarity=0.087 Sum_probs=58.3
Q ss_pred ccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEecccc---ccccchhhhcCHHHHHHHHHHH
Q 015250 316 ATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQ---LSMHSVREICGTEDIDIAYRHF 392 (410)
Q Consensus 316 ~t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~---ryMHS~~E~~~~~D~~~~~~ll 392 (410)
..|+.+...+++.|++.|++++... .+|++++.+... .|.+++ +-+|+ -..|++.|-++.+|+...++++
T Consensus 509 ~~d~~lv~~~~~a~~~~G~~~~~~~-----sgag~Da~~~a~-~~p~am-if~~~g~~g~sHsp~E~v~~edL~~g~~vl 581 (591)
T PRK13799 509 PCAPELMKQLEAATDAAGVPLFELA-----SGAGHDAMKIAE-IMDQAM-LFTRCGNAGISHNPLESMTADDMELSADAF 581 (591)
T ss_pred CCCHHHHHHHHHHHHHcCCCceecC-----cchHHHHHHHHh-hCCEEE-EEEecCCCCCCCCccccCCHHHHHHHHHHH
Confidence 3478899999999999999876532 245666655443 354443 44443 2479999999999999999999
Q ss_pred HHHHhhccc
Q 015250 393 KAFYESFSS 401 (410)
Q Consensus 393 ~af~~~~~~ 401 (410)
..++..+.+
T Consensus 582 ~~~l~~l~~ 590 (591)
T PRK13799 582 LDFLNNFAE 590 (591)
T ss_pred HHHHHHHhh
Confidence 999987754
No 52
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=91.82 E-value=0.34 Score=52.67 Aligned_cols=79 Identities=10% Similarity=0.102 Sum_probs=59.2
Q ss_pred ccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccc---cccchhhhcCHHHHHHHHHHH
Q 015250 316 ATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQL---SMHSVREICGTEDIDIAYRHF 392 (410)
Q Consensus 316 ~t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~r---yMHS~~E~~~~~D~~~~~~ll 392 (410)
..|+.+.+.+++.|++.|+++.... .+|++++.+... . +|++.+-+|.. .+|++.|-++.+|+...++++
T Consensus 507 ~~d~~lv~~~~~aa~~~G~~~~~~~-----sggg~Da~~~a~-~-~p~~mifgpg~~~g~sH~p~E~v~~edL~~g~~vl 579 (591)
T PRK13590 507 PSAPAWQQRWEAAVAALGLPLFRMP-----SGAGHDAMKLHE-I-MPQAMLFVRGENAGISHNPLESSTADDMQLAVQAF 579 (591)
T ss_pred CCCHHHHHHHHHHHHHcCCCcccCC-----cchhHHHHHHHH-H-CCEEEEEEeeCCCCCCCCCccCCCHHHHHHHHHHH
Confidence 3478899999999999998875321 256666655443 3 45555555654 379999999999999999999
Q ss_pred HHHHhhccc
Q 015250 393 KAFYESFSS 401 (410)
Q Consensus 393 ~af~~~~~~ 401 (410)
..++..+..
T Consensus 580 ~~ll~~l~~ 588 (591)
T PRK13590 580 QHLLDQLAA 588 (591)
T ss_pred HHHHHHHhh
Confidence 999987654
No 53
>PRK08596 acetylornithine deacetylase; Validated
Probab=91.43 E-value=0.2 Score=51.88 Aligned_cols=52 Identities=13% Similarity=0.002 Sum_probs=37.7
Q ss_pred CceEEeccC-CcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccc
Q 015250 185 NEFIFSGRL-DNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239 (410)
Q Consensus 185 ~~~i~gkal-Dnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~ 239 (410)
++.+.|++- |++.++++++.|++.++.... ..+...+++|+..||.|+.|+.
T Consensus 108 ~g~lyGrG~~D~Kgg~a~~l~a~~~l~~~~~---~~~~~v~~~~~~dEE~g~~G~~ 160 (421)
T PRK08596 108 DGWLYGRGAADMKGGLAGALFAIQLLHEAGI---ELPGDLIFQSVIGEEVGEAGTL 160 (421)
T ss_pred CCEEEeccccccchHHHHHHHHHHHHHHcCC---CCCCcEEEEEEeccccCCcCHH
Confidence 456776665 999999999998877653211 1244578899999999987654
No 54
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=91.29 E-value=0.53 Score=48.35 Aligned_cols=76 Identities=13% Similarity=0.022 Sum_probs=56.3
Q ss_pred ccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccc--cccchhhhcCHHHHHHHHHHHH
Q 015250 316 ATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQL--SMHSVREICGTEDIDIAYRHFK 393 (410)
Q Consensus 316 ~t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~r--yMHS~~E~~~~~D~~~~~~ll~ 393 (410)
..|..+.+.+++.+++.+.+..... .+|+|++.+... .|+|++. -.|.. .+|++.|-++.+|+..+++++.
T Consensus 323 ~~d~~lv~~l~~a~~~~g~~~~~~~-----~~ggtDa~~~~~-~~~~~v~-fgPg~~~~aH~~dE~v~~e~l~~~~~vl~ 395 (401)
T TIGR01879 323 PCSEELVAALTELCERLGYNARVMV-----SGAGHDAQILAP-IVPIGMI-FIPSINGISHNPAEWSNITDCAEGAKVLY 395 (401)
T ss_pred CCCHHHHHHHHHHHHHcCCCccccc-----cchHHHHHHHHh-hCCEEEE-EecCCCCCcCCCCccCCHHHHHHHHHHHH
Confidence 3478899999999998888766432 245565554443 4766664 44543 5799999999999999999999
Q ss_pred HHHhh
Q 015250 394 AFYES 398 (410)
Q Consensus 394 af~~~ 398 (410)
.++..
T Consensus 396 ~~i~~ 400 (401)
T TIGR01879 396 LMVYQ 400 (401)
T ss_pred HHHHh
Confidence 88764
No 55
>PRK07906 hypothetical protein; Provisional
Probab=91.09 E-value=0.66 Score=47.91 Aligned_cols=77 Identities=14% Similarity=0.172 Sum_probs=55.1
Q ss_pred cCHHHHHHHHHHHHHCC--CCEeEEEeecCCCCCCChHHHHhcCCCCcEEEecc---c-----cccccchhhhcCHHHHH
Q 015250 317 TSGVTAFLFKEIAKLHN--LPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGI---A-----QLSMHSVREICGTEDID 386 (410)
Q Consensus 317 t~~~~~~~l~~~A~~~~--Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igi---P-----~ryMHS~~E~~~~~D~~ 386 (410)
.|..+.+.+++++++.. ...-... .+|+|++.+.. ..|+|++..|- | ...+|++.|-+.++|+.
T Consensus 340 ~~~~~v~~l~~a~~~~~~~~~~~~~~-----~~ggtDa~~~~-~~g~p~~~~gp~~~~~~~~~~~~~H~~~E~v~~~~l~ 413 (426)
T PRK07906 340 FDGPLVDAMNAALLAEDPGARVVPYM-----LSGGTDAKAFS-RLGIRCYGFAPLRLPPDLDFAALFHGVDERVPVDALR 413 (426)
T ss_pred CCcHHHHHHHHHHHHHCCCCeEeeee-----ecccCcHHHHH-hcCCceEEEeccccCccccccccCcCCCCceeHHHHH
Confidence 35678888888888753 2211111 24556666555 47999997753 2 25699999999999999
Q ss_pred HHHHHHHHHHhhc
Q 015250 387 IAYRHFKAFYESF 399 (410)
Q Consensus 387 ~~~~ll~af~~~~ 399 (410)
..++++..++.++
T Consensus 414 ~~~~~~~~~l~~~ 426 (426)
T PRK07906 414 FGVRVLDRFLRTC 426 (426)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998753
No 56
>PRK07079 hypothetical protein; Provisional
Probab=91.04 E-value=0.63 Score=48.85 Aligned_cols=81 Identities=10% Similarity=-0.064 Sum_probs=55.0
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEec--cccccccchhhhcCHHHHHHHHHHHHH
Q 015250 318 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCG--IAQLSMHSVREICGTEDIDIAYRHFKA 394 (410)
Q Consensus 318 ~~~~~~~l~~~A~~-~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~ig--iP~ryMHS~~E~~~~~D~~~~~~ll~a 394 (410)
+..+.+.+.+.+++ .+.+.+.... .+|++...+.....|||++..+ .|--.+|++-|-+.++|+..+++++..
T Consensus 374 ~~~~v~~l~~a~~~~~g~~~~~~~~----~~g~~d~~~~~~~~giP~v~~g~~~~~~~~H~~dE~v~l~~l~~~~~~~~~ 449 (469)
T PRK07079 374 DDPWVRWALASIARTTGKKPALLPN----LGGSLPNDVFADILGLPTLWVPHSYPACSQHAPNEHLLASVAREGLQIMAG 449 (469)
T ss_pred CCHHHHHHHHHHHHHhCCCCceecC----CCcchhHHHHHHHhCCCEEEecCCCCCccCcCCCCCCCHHHHHHHHHHHHH
Confidence 34455666555555 4655454321 2455555444444799999653 344458999999999999999999999
Q ss_pred HHhhcccc
Q 015250 395 FYESFSSI 402 (410)
Q Consensus 395 f~~~~~~~ 402 (410)
++..+.+-
T Consensus 450 ~~~~~~~~ 457 (469)
T PRK07079 450 LFWDLGEQ 457 (469)
T ss_pred HHHHHhcc
Confidence 99988543
No 57
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=90.92 E-value=0.46 Score=48.63 Aligned_cols=77 Identities=18% Similarity=0.035 Sum_probs=53.7
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccc-cccchhhhcCHHHHHHHHHHHHHH
Q 015250 318 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQL-SMHSVREICGTEDIDIAYRHFKAF 395 (410)
Q Consensus 318 ~~~~~~~l~~~A~~-~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~r-yMHS~~E~~~~~D~~~~~~ll~af 395 (410)
+..+.+.+.+++++ .+.+..... .+++|.+....++.|+|++.+|.-.. .+|++.|-++++|+..+++++.++
T Consensus 315 ~~~~~~~l~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~g~p~v~~Gpg~~~~aH~~dE~i~i~~l~~~~~~~~~~ 389 (395)
T TIGR03526 315 DHLITKAALETYKRLFGKEPGVDK-----WTFSTNGVSIMGRHGIPVIGFGPGDEDQAHAPNEKTWKEDLVKAAAMYAAI 389 (395)
T ss_pred CCHHHHHHHHHHHHHhCCCCceee-----eeeecccceehhhcCCCEEEECCcchhhccCCCceEEHHHHHHHHHHHHHH
Confidence 44556666666665 455444322 13444443333457999999996643 589999999999999999999999
Q ss_pred Hhhc
Q 015250 396 YESF 399 (410)
Q Consensus 396 ~~~~ 399 (410)
++.+
T Consensus 390 ~~~~ 393 (395)
T TIGR03526 390 PTVY 393 (395)
T ss_pred HHHh
Confidence 9875
No 58
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=90.80 E-value=0.46 Score=48.57 Aligned_cols=78 Identities=18% Similarity=0.024 Sum_probs=54.5
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccc-cccchhhhcCHHHHHHHHHHHHHH
Q 015250 318 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQL-SMHSVREICGTEDIDIAYRHFKAF 395 (410)
Q Consensus 318 ~~~~~~~l~~~A~~-~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~r-yMHS~~E~~~~~D~~~~~~ll~af 395 (410)
+..+.+.+.+++++ .+-+-.... ..++|.+.......|+|++.+|.-.. .+|++.|-++++|+..+++++..+
T Consensus 315 ~~~~v~~l~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~g~p~v~~Gpg~~~~aH~~nE~v~i~~l~~~~~~~~~~ 389 (395)
T TIGR03320 315 DHLITKAALETYKRLFGKEPGVDK-----WTFSTNGVSIMGRHGIPVIGFGPGDEDQAHAPNEKTWKEDLVRAAAMYAAI 389 (395)
T ss_pred CCHHHHHHHHHHHHHhCCCCceee-----cceecccceehhhcCCCEEEECCCchhhccCCCcEEEHHHHHHHHHHHHHH
Confidence 44556666666665 455544322 13444443333457999999996544 489999999999999999999999
Q ss_pred Hhhcc
Q 015250 396 YESFS 400 (410)
Q Consensus 396 ~~~~~ 400 (410)
+..|-
T Consensus 390 ~~~~~ 394 (395)
T TIGR03320 390 PTVYL 394 (395)
T ss_pred HHHhh
Confidence 88763
No 59
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=90.73 E-value=0.41 Score=49.35 Aligned_cols=77 Identities=16% Similarity=0.002 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEecccc--ccccchhhhcCHHHHHHHHHHHHHHH
Q 015250 319 GVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQ--LSMHSVREICGTEDIDIAYRHFKAFY 396 (410)
Q Consensus 319 ~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~--ryMHS~~E~~~~~D~~~~~~ll~af~ 396 (410)
..+.+.+++.+++.++++-.... ..+|+|++.+... .|+|++.+|... ..+|++.|-++++|+...++++..++
T Consensus 328 ~~l~~~~~~~~~~~~~~~~~~~~---~~~g~tDa~~~~~-~gip~v~~g~G~~~~~aH~~nE~i~i~~~~~~~~~~~~~~ 403 (410)
T PRK06133 328 RALAEHAQGIYGELGRRLEPIDM---GTGGGTDAAFAAG-SGKAAVLEGFGLVGFGAHSNDEYIELNSIVPRLYLLTRMI 403 (410)
T ss_pred HHHHHHHHHHHHHcCCCcccccc---CCCCCchHHHHHh-cCCCceEecccCCCCCCCCCCcEEEcccHHHHHHHHHHHH
Confidence 45667777878877776432111 1245555544433 599999865444 55999999999999999999999988
Q ss_pred hhc
Q 015250 397 ESF 399 (410)
Q Consensus 397 ~~~ 399 (410)
.++
T Consensus 404 ~~~ 406 (410)
T PRK06133 404 MEL 406 (410)
T ss_pred HHh
Confidence 765
No 60
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=90.60 E-value=0.76 Score=47.33 Aligned_cols=77 Identities=10% Similarity=0.029 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChHHHHhcCCC-C-cEEEecccc-ccccchhhhcCHHHHHHHHHHHHHH
Q 015250 320 VTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVG-I-RTVDCGIAQ-LSMHSVREICGTEDIDIAYRHFKAF 395 (410)
Q Consensus 320 ~~~~~l~~~A~~-~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~G-i-~ti~igiP~-ryMHS~~E~~~~~D~~~~~~ll~af 395 (410)
.+.+.+.+.+++ .|.+.-... .+|++++.+... .| + |++..|.-. -.+|++.|-+.++|+..+++++..+
T Consensus 344 ~lv~~l~~a~~~~~g~~~~~~~-----~~g~~D~~~~~~-~g~~~~~v~fGPg~~~~aH~~nE~v~i~~l~~~~~~l~~~ 417 (427)
T PRK13013 344 PVVRSVAAAIERVLGRQADYVV-----SPGTYDQKHIDR-IGKLKNCIAYGPGILDLAHQPDEWVGIADMVDSAKVMALV 417 (427)
T ss_pred HHHHHHHHHHHHhhCCCCceee-----cCccCCHHHHHh-cCCCCCEEEECCCCccccCCCCceeEHHHHHHHHHHHHHH
Confidence 566667777766 677654432 255666655544 44 4 688777422 3589999999999999999999999
Q ss_pred Hhhcccc
Q 015250 396 YESFSSI 402 (410)
Q Consensus 396 ~~~~~~~ 402 (410)
+..+...
T Consensus 418 l~~~~~~ 424 (427)
T PRK13013 418 LADLLAG 424 (427)
T ss_pred HHHHhcc
Confidence 9887654
No 61
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=90.60 E-value=0.51 Score=47.78 Aligned_cols=68 Identities=18% Similarity=0.222 Sum_probs=50.5
Q ss_pred cCHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccc-cccccchhhhcCHHHHHHHHH
Q 015250 317 TSGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIA-QLSMHSVREICGTEDIDIAYR 390 (410)
Q Consensus 317 t~~~~~~~l~~~A~~-~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP-~ryMHS~~E~~~~~D~~~~~~ 390 (410)
.+..+.+.+++.+++ .|.+..... .+|+|++.+... .|||++.+|.- ...+|++.|-+.++|+...++
T Consensus 305 ~~~~~~~~~~~~~~~~~g~~~~~~~-----~~g~tD~~~~~~-~gip~v~~Gpg~~~~~H~~~E~v~~~~~~~~~~ 374 (375)
T TIGR01910 305 PDSRLVKALEAIIKKVRGIEPEVLV-----STGGTDARFLRK-AGIPSIVYGPGDLETAHQVNEYISIKNLVESTK 374 (375)
T ss_pred CCCHHHHHHHHHHHHHhCCCCeEee-----eccchhHHHHHH-cCCcEEEECCCCccccCCCCceeEHHHHHHHhh
Confidence 356688888888876 577654432 246666655543 68999999975 467999999999999988765
No 62
>PRK13381 peptidase T; Provisional
Probab=90.46 E-value=0.42 Score=49.04 Aligned_cols=52 Identities=27% Similarity=0.312 Sum_probs=37.5
Q ss_pred CceEEecc-----CCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCcccccc
Q 015250 185 NEFIFSGR-----LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQG 240 (410)
Q Consensus 185 ~~~i~gka-----lDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~g 240 (410)
++.+.|++ -|+..|+++++.|+..+... .......+++|+..||+|+.|+..
T Consensus 124 ~~~~~GrG~~~~g~DmKgg~aa~l~a~~~l~~~----~~~~g~i~~~~~~dEE~g~~G~~~ 180 (404)
T PRK13381 124 EDIIFSDGTSVLGADNKAAIAVVMTLLENLTEN----EVEHGDIVVAFVPDEEIGLRGAKA 180 (404)
T ss_pred CcEEeCCCccccccccHHHHHHHHHHHHHHHhc----CCCCCCEEEEEEcccccccccHHH
Confidence 34566755 79999999999988776432 012335788999999999876653
No 63
>PRK08652 acetylornithine deacetylase; Provisional
Probab=90.43 E-value=0.54 Score=46.73 Aligned_cols=49 Identities=18% Similarity=0.135 Sum_probs=36.6
Q ss_pred ceEEec-cCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccc
Q 015250 186 EFIFSG-RLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239 (410)
Q Consensus 186 ~~i~gk-alDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~ 239 (410)
+++.|+ +.|++.++++++.|++.+... ..+...+++|+..||+|+.|++
T Consensus 78 g~iyGrG~~D~Kg~~a~~l~a~~~l~~~-----~~~~~v~~~~~~dEE~g~~G~~ 127 (347)
T PRK08652 78 VYVYGTGACDAKGGVAAILLALEELGKE-----FEDLNVGIAFVSDEEEGGRGSA 127 (347)
T ss_pred CEEEeccchhhhHHHHHHHHHHHHHhhc-----ccCCCEEEEEecCcccCChhHH
Confidence 455555 789999999999998877532 1233577889999999987654
No 64
>PRK07522 acetylornithine deacetylase; Provisional
Probab=89.65 E-value=0.74 Score=46.61 Aligned_cols=71 Identities=18% Similarity=0.215 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEecc-ccccccchhhhcCHHHHHHHHHHHHHHHh
Q 015250 319 GVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGI-AQLSMHSVREICGTEDIDIAYRHFKAFYE 397 (410)
Q Consensus 319 ~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igi-P~ryMHS~~E~~~~~D~~~~~~ll~af~~ 397 (410)
..+.+.+++.+.+. ..... .++|.+.+.. ..|+|++.+|. +.-.+|++.|-+..+|+...++++..++.
T Consensus 312 ~~~v~~~~~~~~~~---~~~~~------~~~td~~~~~-~~gip~v~~Gpg~~~~~H~~~E~i~i~~l~~~~~~~~~~~~ 381 (385)
T PRK07522 312 AAAARLVRALTGDN---DLRKV------AYGTEAGLFQ-RAGIPTVVCGPGSIEQAHKPDEFVELAQLAACEAFLRRLLA 381 (385)
T ss_pred cHHHHHHHHHhCCC---CcceE------eeecchHHhc-cCCCCEEEECCCChhhCCCCCccccHHHHHHHHHHHHHHHH
Confidence 45666666655442 21111 2445555444 58999999996 34589999999999999999999999987
Q ss_pred hc
Q 015250 398 SF 399 (410)
Q Consensus 398 ~~ 399 (410)
.+
T Consensus 382 ~~ 383 (385)
T PRK07522 382 SL 383 (385)
T ss_pred HH
Confidence 65
No 65
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=88.72 E-value=0.6 Score=48.32 Aligned_cols=53 Identities=17% Similarity=-0.018 Sum_probs=43.5
Q ss_pred eccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCcccccccCCcchH
Q 015250 190 SGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMF 247 (410)
Q Consensus 190 gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~gA~~~~~p 247 (410)
-.+.||-.|+++++|..+.++..+ ++....++++..||.|++|++-.+.....
T Consensus 224 ~GA~DNasGva~llEiAr~l~~~~-----p~~~v~f~~~~aEE~Gl~GS~~~~~~~~~ 276 (435)
T COG2234 224 PGADDNASGVAALLELARVLKGNP-----PKRTVRFVAFGAEESGLLGSEAYVKRLSK 276 (435)
T ss_pred CCcccccHHHHHHHHHHHHHhcCC-----CCceEEEEEecchhhcccccHHHHhcCCc
Confidence 389999999999999998887531 34567889999999999999987776653
No 66
>PRK09104 hypothetical protein; Validated
Probab=88.42 E-value=1.3 Score=46.38 Aligned_cols=77 Identities=16% Similarity=0.156 Sum_probs=53.6
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCC--hHHHHhcCCCCcEEEecccc--ccccchhhhcCHHHHHHHHHHH
Q 015250 318 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGST--IGPILASGVGIRTVDCGIAQ--LSMHSVREICGTEDIDIAYRHF 392 (410)
Q Consensus 318 ~~~~~~~l~~~A~~-~~Ip~Q~~~~~~d~~~G~t--~g~i~~s~~Gi~ti~igiP~--ryMHS~~E~~~~~D~~~~~~ll 392 (410)
+..+...+.+.+++ .+.+..... .+|++ .+.+. ...|+|++.+|... -.+|++.|-++++|+..+++++
T Consensus 381 ~~~~v~~l~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~-~~~gip~v~~g~G~~~~~aH~~nE~i~i~~l~~~~~~~ 454 (464)
T PRK09104 381 DSPALAAAKAALSDEWGKPAVLIG-----SGGSIPIVGDFK-RILGMDSLLVGFGLDDDRIHSPNEKYDLESFHKGIRSW 454 (464)
T ss_pred CCHHHHHHHHHHHHHhCCCceecC-----CCCcHHHHHHHH-HHhCCCEEEecCCCCCCCCcCCCCCcCHHHHHHHHHHH
Confidence 44556666666554 666654321 24443 23343 33689999888743 3699999999999999999999
Q ss_pred HHHHhhcc
Q 015250 393 KAFYESFS 400 (410)
Q Consensus 393 ~af~~~~~ 400 (410)
..++..+.
T Consensus 455 ~~ll~~~~ 462 (464)
T PRK09104 455 ARILAALA 462 (464)
T ss_pred HHHHHHhh
Confidence 99998763
No 67
>PRK05111 acetylornithine deacetylase; Provisional
Probab=88.22 E-value=1.1 Score=45.38 Aligned_cols=50 Identities=18% Similarity=0.199 Sum_probs=41.5
Q ss_pred CChHHHHhcCCCCcEEEecccc-ccccchhhhcCHHHHHHHHHHHHHHHhhc
Q 015250 349 STIGPILASGVGIRTVDCGIAQ-LSMHSVREICGTEDIDIAYRHFKAFYESF 399 (410)
Q Consensus 349 ~t~g~i~~s~~Gi~ti~igiP~-ryMHS~~E~~~~~D~~~~~~ll~af~~~~ 399 (410)
+|++++.. ..|+|++.+|... -.+|++.|-++.+|+...++++..++..+
T Consensus 330 ~~Da~~~~-~~g~p~v~~G~g~~~~~H~~~E~v~~~~l~~~~~i~~~~~~~~ 380 (383)
T PRK05111 330 CTEAPFIQ-QLGCPTLVLGPGSIEQAHQPDEYLELSFIKPTRELLRQLIHHF 380 (383)
T ss_pred eccHHHHH-hcCCCEEEECCCchHhCcCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 34455543 5799999999885 35899999999999999999999998766
No 68
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=87.77 E-value=1.6 Score=44.67 Aligned_cols=78 Identities=21% Similarity=0.214 Sum_probs=56.2
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEecccc-ccccchhhhcCHHHHHHHHHHHHHH
Q 015250 318 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQ-LSMHSVREICGTEDIDIAYRHFKAF 395 (410)
Q Consensus 318 ~~~~~~~l~~~A~~-~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~-ryMHS~~E~~~~~D~~~~~~ll~af 395 (410)
+..+.+.+.+.+++ .|.+ -. .. ..||++++.+. ++.|+|++..|... --+|++.|-+.++|++..++++..+
T Consensus 329 ~~~~v~~l~~~~~~~~g~~-~~-~~---~~G~~~da~~~-~~~~~~~~~fgp~~~~~~H~~~E~v~i~~l~~~~~~~~~~ 402 (409)
T COG0624 329 DSPLVAALAEAAEELLGLP-PE-VS---TGGGTHDARFF-ARLGIPAVIFGPGDIGLAHQPNEYVELEDLVKGAKVLARL 402 (409)
T ss_pred chHHHHHHHHHHHHhhCCC-ce-ec---CCCCcchHHHH-HhcCCeeEEECCCCcccccCCCceeeHHHHHHHHHHHHHH
Confidence 55666666666666 5777 33 32 13344455444 44668977777766 6999999999999999999999999
Q ss_pred Hhhccc
Q 015250 396 YESFSS 401 (410)
Q Consensus 396 ~~~~~~ 401 (410)
+..+..
T Consensus 403 l~~l~~ 408 (409)
T COG0624 403 LYELAE 408 (409)
T ss_pred HHHHhc
Confidence 988753
No 69
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=87.25 E-value=0.77 Score=46.46 Aligned_cols=53 Identities=13% Similarity=-0.007 Sum_probs=38.4
Q ss_pred CceEEecc-CCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCcccccc
Q 015250 185 NEFIFSGR-LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQG 240 (410)
Q Consensus 185 ~~~i~gka-lDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~g 240 (410)
++.+.|++ .|+..++++++.+++.+..... ..+...+++|+..||+|+.|+..
T Consensus 95 ~g~i~grG~~D~k~~~a~~l~a~~~l~~~~~---~~~~~i~~~~~~~EE~g~~G~~~ 148 (375)
T TIGR01910 95 DGKLYGRGATDMKGGLVALLYALKAIREAGI---KPNGNIILQSVVDEESGEAGTLY 148 (375)
T ss_pred CCEEEecCccccchHHHHHHHHHHHHHHcCC---CCCccEEEEEEcCcccCchhHHH
Confidence 45677765 6999999999998877643210 12445788999999999877663
No 70
>PRK07205 hypothetical protein; Provisional
Probab=87.17 E-value=0.6 Score=48.62 Aligned_cols=40 Identities=18% Similarity=0.115 Sum_probs=34.3
Q ss_pred CcEEEecc--c--cccccchhhhcCHHHHHHHHHHHHHHHhhcc
Q 015250 361 IRTVDCGI--A--QLSMHSVREICGTEDIDIAYRHFKAFYESFS 400 (410)
Q Consensus 361 i~ti~igi--P--~ryMHS~~E~~~~~D~~~~~~ll~af~~~~~ 400 (410)
.+++.+|. | ...+|++.|-+.++|+..+++++..++.++.
T Consensus 399 ~~~i~~G~~~Pg~~~~aH~~nE~v~i~~l~~~~~~l~~~l~~l~ 442 (444)
T PRK07205 399 PNCVAFGALFPGAPQTEHQANEHIVLEDLYRAMDIYAEAIYRLT 442 (444)
T ss_pred CCcEEECCccCCCCCCCcCcccCccHHHHHHHHHHHHHHHHHHh
Confidence 47777885 5 3679999999999999999999999998763
No 71
>PRK06915 acetylornithine deacetylase; Validated
Probab=87.08 E-value=0.7 Score=47.62 Aligned_cols=52 Identities=15% Similarity=-0.013 Sum_probs=37.2
Q ss_pred CceEEeccC-CcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccc
Q 015250 185 NEFIFSGRL-DNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239 (410)
Q Consensus 185 ~~~i~gkal-Dnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~ 239 (410)
++.+.|++- |++.|+++++.|++.++.... ..+....++++..||+|+.|+.
T Consensus 124 ~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~---~~~~~v~~~~~~dEE~g~~G~~ 176 (422)
T PRK06915 124 GGRIYGRGTTDMKGGNVALLLAMEALIESGI---ELKGDVIFQSVIEEESGGAGTL 176 (422)
T ss_pred CCEEEecCcccchHHHHHHHHHHHHHHHcCC---CCCCcEEEEEecccccCCcchH
Confidence 456788877 999999999888776643211 1234567889999999987654
No 72
>PRK08201 hypothetical protein; Provisional
Probab=86.95 E-value=2.1 Score=44.75 Aligned_cols=76 Identities=14% Similarity=0.144 Sum_probs=52.9
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCCh---HHHHhcCCCCcEEEeccc--cccccchhhhcCHHHHHHHHHH
Q 015250 318 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTI---GPILASGVGIRTVDCGIA--QLSMHSVREICGTEDIDIAYRH 391 (410)
Q Consensus 318 ~~~~~~~l~~~A~~-~~Ip~Q~~~~~~d~~~G~t~---g~i~~s~~Gi~ti~igiP--~ryMHS~~E~~~~~D~~~~~~l 391 (410)
+..+.+.+.+.+++ .+.+.... ..|+|+ +.+ ....|+|++.+|.- -..+|++.|-+.++|+..++++
T Consensus 373 ~~~~~~~l~~a~~~~~g~~~~~~------~~gg~~~~~~~~-~~~~gip~v~~GpG~~~~~~H~~nE~v~i~~l~~~~~~ 445 (456)
T PRK08201 373 DHPAIQAAARAYEAVYGTEAAFT------RMGGSIPVVETF-SSQLHIPIVLMGFGLPSENFHAPNEHFHLENFDKGLRT 445 (456)
T ss_pred CCHHHHHHHHHHHHHhCCCceec------CCCCcHHHHHHH-HHHhCCCEEEecCCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence 34555666666554 46654432 134443 333 34479999988653 3578999999999999999999
Q ss_pred HHHHHhhcc
Q 015250 392 FKAFYESFS 400 (410)
Q Consensus 392 l~af~~~~~ 400 (410)
+..|+..+.
T Consensus 446 l~~~~~~~~ 454 (456)
T PRK08201 446 LVEYWHQLA 454 (456)
T ss_pred HHHHHHHhh
Confidence 999998774
No 73
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=86.81 E-value=0.74 Score=46.82 Aligned_cols=49 Identities=14% Similarity=0.057 Sum_probs=37.3
Q ss_pred CceEEecc-CCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccc
Q 015250 185 NEFIFSGR-LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239 (410)
Q Consensus 185 ~~~i~gka-lDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~ 239 (410)
++++.|++ .|++.++++++.+++.++.. .+...+++|+..||+|+.|+.
T Consensus 104 ~~~~~grG~~D~k~~~~~~l~a~~~l~~~------~~~~v~~~~~~~EE~g~~G~~ 153 (394)
T PRK08651 104 DGKVYGRGASDMKGGIAALLAAFERLDPA------GDGNIELAIVPDEETGGTGTG 153 (394)
T ss_pred CCEEEecCccccchHHHHHHHHHHHHHhc------CCCCEEEEEecCccccchhHH
Confidence 44566665 89999999999998877532 134578899999999986655
No 74
>PRK09104 hypothetical protein; Validated
Probab=86.42 E-value=0.91 Score=47.56 Aligned_cols=50 Identities=16% Similarity=0.007 Sum_probs=35.6
Q ss_pred eEEecc-CCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccc
Q 015250 187 FIFSGR-LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239 (410)
Q Consensus 187 ~i~gka-lDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~ 239 (410)
++.|++ .|++.++++++.|++.+++.... .+....++++..||+|+.|..
T Consensus 120 ~lyGRG~~D~Kg~laa~l~a~~~l~~~~~~---~~~~i~~~~~~dEE~g~~g~~ 170 (464)
T PRK09104 120 VIVARGASDDKGQLMTFVEACRAWKAVTGS---LPVRVTILFEGEEESGSPSLV 170 (464)
T ss_pred eEEEecccCCcHHHHHHHHHHHHHHHhcCC---CCCcEEEEEECccccCCccHH
Confidence 466665 99999999999988776432101 233467889999999986544
No 75
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=86.35 E-value=0.82 Score=47.13 Aligned_cols=52 Identities=17% Similarity=0.091 Sum_probs=36.7
Q ss_pred CceEEecc-CCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccc
Q 015250 185 NEFIFSGR-LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239 (410)
Q Consensus 185 ~~~i~gka-lDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~ 239 (410)
++++.|++ .|+..++++++.++..++.. .. ......+++|+..||+|+.|+.
T Consensus 126 ~~~iyGrG~~D~kgg~a~~l~a~~~l~~~--~~-~~~~~i~~~~~~dEE~g~~G~~ 178 (410)
T PRK06133 126 GDRAYGPGIADDKGGVAVILHALKILQQL--GF-KDYGTLTVLFNPDEETGSPGSR 178 (410)
T ss_pred CCEEECCccccchHHHHHHHHHHHHHHHc--CC-CCCCCEEEEEECCcccCCccHH
Confidence 45666655 89999999999888766432 10 1234567899999999986654
No 76
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=85.75 E-value=0.98 Score=45.25 Aligned_cols=48 Identities=19% Similarity=0.042 Sum_probs=36.2
Q ss_pred CceEEecc-CCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccc
Q 015250 185 NEFIFSGR-LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239 (410)
Q Consensus 185 ~~~i~gka-lDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~ 239 (410)
+++|.|++ .|++.|+++++.|+..+.+. .....+++++.||.|+.|++
T Consensus 82 ~g~iyGrG~~DmKgg~aa~l~a~~~l~~~-------~~~i~~~~~~dEE~g~~G~~ 130 (346)
T PRK00466 82 GEVIYGRGAVDAKGPLISMIIAAWLLNEK-------GIKVMVSGLADEESTSIGAK 130 (346)
T ss_pred CCEEEecCccccchHHHHHHHHHHHHHHc-------CCCEEEEEEcCcccCCccHH
Confidence 34666655 99999999999998877532 22357889999999887655
No 77
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=85.51 E-value=1.1 Score=44.72 Aligned_cols=49 Identities=12% Similarity=0.020 Sum_probs=37.3
Q ss_pred CceEEec-cCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCcccccc
Q 015250 185 NEFIFSG-RLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQG 240 (410)
Q Consensus 185 ~~~i~gk-alDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~g 240 (410)
++++.|+ ..|+..++++++.|++.++.. ....++++++.||.|+.|...
T Consensus 72 ~g~i~GrG~~D~Kg~~aa~l~a~~~l~~~-------~~~i~~~~~~dEE~g~~G~~~ 121 (336)
T TIGR01902 72 GGLLYGRGAVDAKGPLIAMIFATWLLNEK-------GIKVIVSGLVDEESSSKGARE 121 (336)
T ss_pred CCEEEEecccCCCcHHHHHHHHHHHHHhC-------CCcEEEEEEeCcccCCccHHH
Confidence 3456565 799999999999998877532 335677899999998877663
No 78
>PRK07473 carboxypeptidase; Provisional
Probab=85.39 E-value=1 Score=45.92 Aligned_cols=52 Identities=21% Similarity=0.235 Sum_probs=36.8
Q ss_pred CceEEecc-CCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccc
Q 015250 185 NEFIFSGR-LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239 (410)
Q Consensus 185 ~~~i~gka-lDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~ 239 (410)
++++.|++ .|++.|+++++.|++.+.... . .......++|+..||+|+.|++
T Consensus 102 ~g~lyGrG~~D~Kgglaa~l~A~~~l~~~~--~-~~~~~v~~~~~~dEE~g~~g~~ 154 (376)
T PRK07473 102 GNKCYGPGILDMKGGNYLALEAIRQLARAG--I-TTPLPITVLFTPDEEVGTPSTR 154 (376)
T ss_pred CCEEEcCchhhchHHHHHHHHHHHHHHHcC--C-CCCCCEEEEEeCCcccCCccHH
Confidence 34566665 999999999998887764321 0 1123467889999999987654
No 79
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=85.33 E-value=1.2 Score=44.69 Aligned_cols=47 Identities=21% Similarity=0.265 Sum_probs=37.1
Q ss_pred CCChHHHHhcCCCCcEEEecccc-ccccchhhhcCHHHHHHHHHHHHHH
Q 015250 348 GSTIGPILASGVGIRTVDCGIAQ-LSMHSVREICGTEDIDIAYRHFKAF 395 (410)
Q Consensus 348 G~t~g~i~~s~~Gi~ti~igiP~-ryMHS~~E~~~~~D~~~~~~ll~af 395 (410)
++|++.+.. ..|||++.+|.-. ..+|++.|-++++|+...++++..+
T Consensus 316 ~~tD~~~~~-~~gip~v~~Gpg~~~~~H~~~E~i~i~~l~~~~~~~~~~ 363 (364)
T TIGR01892 316 YGTEAPQFQ-ELGAEAVVCGPGDIRQAHQPDEYVEIEDLVRCRAVLARL 363 (364)
T ss_pred ccccHHHHH-hCCCcEEEECCCChHhCCCCCceeeHHHHHHHHHHHHHh
Confidence 345565543 4799999998543 3589999999999999999998876
No 80
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=84.74 E-value=1.4 Score=45.38 Aligned_cols=48 Identities=21% Similarity=0.183 Sum_probs=34.9
Q ss_pred CceEEeccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCcccc
Q 015250 185 NEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSY 238 (410)
Q Consensus 185 ~~~i~gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga 238 (410)
++.+.| -|++.|+++++.|++.+++.+ .+ .+....++|+..||+| +|+
T Consensus 135 g~~l~G--~D~KgglAa~l~A~~~L~e~~-~~--~~g~I~~~ft~dEE~g-~Ga 182 (410)
T TIGR01882 135 GTTLLG--ADDKAGIAEIMTAADYLINHP-EI--KHGTIRVAFTPDEEIG-RGA 182 (410)
T ss_pred CCEeec--ccCHHHHHHHHHHHHHHHhCC-CC--CCCCEEEEEECcccCC-cCc
Confidence 445677 999999999999988775321 11 2345788999999987 444
No 81
>PRK07907 hypothetical protein; Provisional
Probab=84.51 E-value=3.1 Score=43.41 Aligned_cols=78 Identities=12% Similarity=0.014 Sum_probs=52.9
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCCh--HHHHhcCCCCcEEEecccc--ccccchhhhcCHHHHHHHHHHH
Q 015250 318 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTI--GPILASGVGIRTVDCGIAQ--LSMHSVREICGTEDIDIAYRHF 392 (410)
Q Consensus 318 ~~~~~~~l~~~A~~-~~Ip~Q~~~~~~d~~~G~t~--g~i~~s~~Gi~ti~igiP~--ryMHS~~E~~~~~D~~~~~~ll 392 (410)
+..+.+.+.+.+++ .+.+..... .+|++. +.+.....++|++..|.-. ..+|++.|-++++|+..+++++
T Consensus 365 ~~~~~~~l~~a~~~~~g~~~~~~~-----~~g~~~~~~~~~~~~~~~~~v~~Gpg~~~~~aH~~nE~i~i~~l~~~~~~~ 439 (449)
T PRK07907 365 SGPAYDAARAAMREAWGKDPVDMG-----MGGSIPFIAELQEAFPQAEILVTGVEDPKTRAHSPNESVHLGELERAAVAE 439 (449)
T ss_pred CCHHHHHHHHHHHHHhCCCceecC-----CCCcHHHHHHHHHhcCCCcEEEeccCCCCCCCcCCCCCcCHHHHHHHHHHH
Confidence 44555555655554 477654321 234321 2233333468999888643 5789999999999999999999
Q ss_pred HHHHhhcc
Q 015250 393 KAFYESFS 400 (410)
Q Consensus 393 ~af~~~~~ 400 (410)
..++.+|.
T Consensus 440 ~~~l~~~~ 447 (449)
T PRK07907 440 ALLLARLA 447 (449)
T ss_pred HHHHHHHh
Confidence 99999874
No 82
>PRK08201 hypothetical protein; Provisional
Probab=84.50 E-value=1.2 Score=46.47 Aligned_cols=51 Identities=14% Similarity=0.153 Sum_probs=35.7
Q ss_pred CceEEecc-CCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCcccc
Q 015250 185 NEFIFSGR-LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSY 238 (410)
Q Consensus 185 ~~~i~gka-lDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga 238 (410)
+++|.|++ -|++.++++++.|++.+.... ...+....++++..||+|+.|.
T Consensus 110 ~g~lyGRG~~DmKgglaa~l~a~~~l~~~~---~~~~~~i~~~~~~dEE~g~~g~ 161 (456)
T PRK08201 110 DGKLYARGASDDKGQVFMHLKAVEALLKVE---GTLPVNVKFCIEGEEEIGSPNL 161 (456)
T ss_pred CCEEEEEecccCcHHHHHHHHHHHHHHHhc---CCCCCCEEEEEEcccccCCccH
Confidence 45677765 899999999988887664210 0123356778999999987653
No 83
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=84.11 E-value=1.3 Score=44.77 Aligned_cols=52 Identities=13% Similarity=0.020 Sum_probs=36.8
Q ss_pred CceEEeccC-CcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccc
Q 015250 185 NEFIFSGRL-DNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239 (410)
Q Consensus 185 ~~~i~gkal-Dnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~ 239 (410)
++++.|++- |++.|+++++.|++.+..... .......++|+..||+|+.|+.
T Consensus 90 ~g~l~GrG~~D~Kgg~aa~l~a~~~l~~~~~---~~~~~i~l~~~~dEE~g~~G~~ 142 (377)
T PRK08588 90 DGKLYGRGATDMKSGLAALVIAMIELKEQGQ---LLNGTIRLLATAGEEVGELGAK 142 (377)
T ss_pred CCEEEecCcccccchHHHHHHHHHHHHHcCC---CCCCcEEEEEEcccccCchhHH
Confidence 456777655 999999999888776543210 1234678899999999887655
No 84
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=83.92 E-value=1.2 Score=45.31 Aligned_cols=49 Identities=22% Similarity=0.096 Sum_probs=35.8
Q ss_pred CceEEecc-CCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCcc
Q 015250 185 NEFIFSGR-LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSD 236 (410)
Q Consensus 185 ~~~i~gka-lDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsr 236 (410)
++++.|++ .|+..|+++++.|++.+...+. ..+..+.++|+..||.|+.
T Consensus 107 ~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~---~~~~~v~~~~~~dEE~g~~ 156 (400)
T PRK13983 107 DGKIYGRGSEDNGQGIVSSLLALKALMDLGI---RPKYNLGLAFVSDEETGSK 156 (400)
T ss_pred CCEEEecCccCccchHHHHHHHHHHHHHhCC---CCCCcEEEEEEeccccCCc
Confidence 45677776 9999999999888766643210 1244578899999999875
No 85
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=83.80 E-value=2.1 Score=42.70 Aligned_cols=49 Identities=20% Similarity=0.228 Sum_probs=39.4
Q ss_pred CCCChHHHHhcCCCCcEEEeccccc-cccchhhhcCHHHHHHHHHHHHHHH
Q 015250 347 CGSTIGPILASGVGIRTVDCGIAQL-SMHSVREICGTEDIDIAYRHFKAFY 396 (410)
Q Consensus 347 ~G~t~g~i~~s~~Gi~ti~igiP~r-yMHS~~E~~~~~D~~~~~~ll~af~ 396 (410)
.|+|++.+.. ..|+|++.+|.-.. .+|++.|-++.+|+...++++..|+
T Consensus 302 ~g~td~~~~~-~~Gip~v~~Gpg~~~~~H~~~E~v~i~~l~~~~~~~~~~~ 351 (352)
T PRK13007 302 YGWTDVARFS-ALGIPAVNFGPGDPALAHQRDEHVPVAQITACARILRRWL 351 (352)
T ss_pred cccchHHHHH-hCCCCEEEeCCCchhhccCCCCceEHHHHHHHHHHHHHHh
Confidence 3555555544 57999999995443 6999999999999999999999886
No 86
>PRK06156 hypothetical protein; Provisional
Probab=83.79 E-value=1.3 Score=47.44 Aligned_cols=40 Identities=15% Similarity=0.213 Sum_probs=32.5
Q ss_pred cEEEecccc----ccccchhhhcCHHHHHHHHHHHHHHHhhccc
Q 015250 362 RTVDCGIAQ----LSMHSVREICGTEDIDIAYRHFKAFYESFSS 401 (410)
Q Consensus 362 ~ti~igiP~----ryMHS~~E~~~~~D~~~~~~ll~af~~~~~~ 401 (410)
+++..|--. ..||++.|-+.++++..+++++..++..+.+
T Consensus 473 ~~v~fGP~~~g~~~~aHt~dE~V~ie~l~~~~~i~~~~l~~l~~ 516 (520)
T PRK06156 473 NAVSFGPAMPGVKYTGHTENEFKTVEQFMLDLQMYTEMLIRIGN 516 (520)
T ss_pred ccEEEcCCCCCCCCCCcCcccCCCHHHHHHHHHHHHHHHHHHhc
Confidence 456666421 2489999999999999999999999988865
No 87
>PRK07318 dipeptidase PepV; Reviewed
Probab=83.25 E-value=1.4 Score=46.27 Aligned_cols=52 Identities=15% Similarity=0.033 Sum_probs=37.1
Q ss_pred CceEEecc-CCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccc
Q 015250 185 NEFIFSGR-LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239 (410)
Q Consensus 185 ~~~i~gka-lDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~ 239 (410)
++++.|++ .|+..|+++++.|++.++... . ..+....+++++.||+|+.|+.
T Consensus 108 dg~lyGRG~~DmKgg~aa~l~Al~~l~~~g--~-~~~~~i~l~~~~DEE~g~~G~~ 160 (466)
T PRK07318 108 DGKIYARGTSDDKGPTMAAYYALKIIKELG--L-PLSKKVRFIVGTDEESGWKCMD 160 (466)
T ss_pred CCEEEEcccccCcHHHHHHHHHHHHHHHcC--C-CCCccEEEEEEcccccCchhHH
Confidence 45666665 899999999998887765321 1 1233467889999999987653
No 88
>PRK07205 hypothetical protein; Provisional
Probab=83.18 E-value=2.8 Score=43.62 Aligned_cols=51 Identities=14% Similarity=0.020 Sum_probs=32.4
Q ss_pred CceEEecc-CCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCcccc
Q 015250 185 NEFIFSGR-LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSY 238 (410)
Q Consensus 185 ~~~i~gka-lDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga 238 (410)
++++.|++ .|+..++++++.|++.+.... . ..+..+.++|+..||+|+.|+
T Consensus 106 dg~lyGRGa~DmKgglaa~l~Al~~l~~~~--~-~~~~~i~l~~~~dEE~g~~g~ 157 (444)
T PRK07205 106 DGCLFGRGTQDDKGPSMAALYAVKALLDAG--V-QFNKRIRFIFGTDEETLWRCM 157 (444)
T ss_pred CCEEEECCcccCcHHHHHHHHHHHHHHHcC--C-CCCCcEEEEEECCcccCcccH
Confidence 34566665 888888888888777654320 0 113346677888888877653
No 89
>PRK07522 acetylornithine deacetylase; Provisional
Probab=82.54 E-value=1.6 Score=44.11 Aligned_cols=49 Identities=16% Similarity=0.066 Sum_probs=35.3
Q ss_pred ceEEec-cCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccc
Q 015250 186 EFIFSG-RLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239 (410)
Q Consensus 186 ~~i~gk-alDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~ 239 (410)
+++.|+ +.|++.++++++.|++.+.+. . ......++|+..||+|++|+.
T Consensus 95 g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~---~~~~i~~~~~~dEE~g~~G~~ 144 (385)
T PRK07522 95 GRLYGRGTCDMKGFIAAALAAVPELAAA--P---LRRPLHLAFSYDEEVGCLGVP 144 (385)
T ss_pred CEEEeccccccchHHHHHHHHHHHHHhC--C---CCCCEEEEEEeccccCCccHH
Confidence 445544 479999999999888776432 1 234578899999999986555
No 90
>PRK08262 hypothetical protein; Provisional
Probab=82.53 E-value=1.7 Score=45.75 Aligned_cols=78 Identities=9% Similarity=0.046 Sum_probs=49.0
Q ss_pred CHHHHHHHHHHHHHCC--CCEeEEEeecCCCCCCChHHHHhcCC----CCcEEEeccc-cccccchhhhcCHHHHHHHHH
Q 015250 318 SGVTAFLFKEIAKLHN--LPTQEFVVRNDMGCGSTIGPILASGV----GIRTVDCGIA-QLSMHSVREICGTEDIDIAYR 390 (410)
Q Consensus 318 ~~~~~~~l~~~A~~~~--Ip~Q~~~~~~d~~~G~t~g~i~~s~~----Gi~ti~igiP-~ryMHS~~E~~~~~D~~~~~~ 390 (410)
|..+.+.+++.+++.. .+..... .+|+|++.+..... +++++..|-- ...+|++.|-++.+|+...++
T Consensus 400 ~~~lv~~l~~a~~~~~g~~~~~~~~-----~~g~tDa~~~~~~~p~~~~~~~~~~gpg~~~~~Ht~dE~i~i~~l~~~~~ 474 (486)
T PRK08262 400 DSAAYKLLAATIREVFPDVVVAPYL-----VVGATDSRHYSGISDNVYRFSPLRLSPEDLARFHGTNERISVANYARMIR 474 (486)
T ss_pred CCHHHHHHHHHHHHHCCCCccccce-----ecccccHHHHHHhcCCeEEECCccCCcccccCCCCCCCceeHHHHHHHHH
Confidence 4566677777776643 3332221 24666665544321 1233333211 246899999999999999999
Q ss_pred HHHHHHhhcc
Q 015250 391 HFKAFYESFS 400 (410)
Q Consensus 391 ll~af~~~~~ 400 (410)
++..++.++.
T Consensus 475 i~~~~l~~~~ 484 (486)
T PRK08262 475 FYYRLIENAA 484 (486)
T ss_pred HHHHHHHHhh
Confidence 9999998764
No 91
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=81.83 E-value=2.8 Score=41.95 Aligned_cols=10 Identities=30% Similarity=0.405 Sum_probs=4.9
Q ss_pred EEEEeecCCC
Q 015250 20 HIIAAHTDSP 29 (410)
Q Consensus 20 ~mi~AH~De~ 29 (410)
+++.+|||-+
T Consensus 61 i~l~~H~Dtv 70 (364)
T TIGR01892 61 LALSGHTDVV 70 (364)
T ss_pred EEEEcccccc
Confidence 4555555544
No 92
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=81.43 E-value=2.7 Score=44.23 Aligned_cols=75 Identities=16% Similarity=0.127 Sum_probs=54.2
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEecccc-ccccchhhhcCHHHHHHHHHHHHHH
Q 015250 318 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQ-LSMHSVREICGTEDIDIAYRHFKAF 395 (410)
Q Consensus 318 ~~~~~~~l~~~A~~-~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~-ryMHS~~E~~~~~D~~~~~~ll~af 395 (410)
+..+.+.+.+..++ .+.+-+.... +|+|++.+.. .||+++.+|--- ..+|++.|-+.++++..+++++..+
T Consensus 388 ds~lv~~l~~a~~~v~G~~~~~~~~-----~ggTDa~~~~--~~i~~gv~gPG~~~~aH~~dE~V~i~el~~a~~iy~~~ 460 (466)
T TIGR01886 388 SDPLVQTLLKVYEKHTGKKGHEVII-----GGGTYGRLLE--RGVAYGAMFEGGPDVMHQANEFMMLDDLILAAAIYAEA 460 (466)
T ss_pred CCHHHHHHHHHHHHHhCCCCceeee-----cCccHHHhcc--cccccccccCCCCCCccCCCcceEHHHHHHHHHHHHHH
Confidence 44667777777765 3555554332 4666665544 378888766553 4689999999999999999999999
Q ss_pred Hhhc
Q 015250 396 YESF 399 (410)
Q Consensus 396 ~~~~ 399 (410)
+..|
T Consensus 461 i~~l 464 (466)
T TIGR01886 461 IYEL 464 (466)
T ss_pred HHHH
Confidence 9876
No 93
>PRK08554 peptidase; Reviewed
Probab=81.14 E-value=1.7 Score=45.34 Aligned_cols=48 Identities=15% Similarity=0.159 Sum_probs=34.9
Q ss_pred CceEEec-cCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccc
Q 015250 185 NEFIFSG-RLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDS 237 (410)
Q Consensus 185 ~~~i~gk-alDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrg 237 (410)
++++.|+ ..|+..|+++++.|++.++.. . .+....++++..||+|+.+
T Consensus 93 ~g~lyGrG~~DmKgg~aa~l~A~~~l~~~--~---~~~~i~l~~~~dEE~g~~~ 141 (438)
T PRK08554 93 GDKAYGRGSADDKGNVASVMLALKELSKE--P---LNGKVIFAFTGDEEIGGAM 141 (438)
T ss_pred CCEEEECCcccchHHHHHHHHHHHHHHhc--C---CCCCEEEEEEcccccCccc
Confidence 4466664 599999999999888876532 1 2334678899999998653
No 94
>PRK05111 acetylornithine deacetylase; Provisional
Probab=80.94 E-value=2.2 Score=43.18 Aligned_cols=50 Identities=14% Similarity=-0.009 Sum_probs=37.0
Q ss_pred CceEEecc-CCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccc
Q 015250 185 NEFIFSGR-LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239 (410)
Q Consensus 185 ~~~i~gka-lDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~ 239 (410)
++++.|++ .|+..++++++.|++.+... . .+....++|+..||+|+.|++
T Consensus 101 ~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~---~~~~i~~~~~~~EE~g~~G~~ 151 (383)
T PRK05111 101 DGKLYGLGTADMKGFFAFILEALRDIDLT--K---LKKPLYILATADEETSMAGAR 151 (383)
T ss_pred CCEEEecccccccHHHHHHHHHHHHHhhc--C---CCCCeEEEEEeccccCcccHH
Confidence 34566664 89999999999998877532 1 233467899999999987665
No 95
>PRK09133 hypothetical protein; Provisional
Probab=80.45 E-value=2.1 Score=44.87 Aligned_cols=52 Identities=17% Similarity=0.131 Sum_probs=37.1
Q ss_pred CceEEecc-CCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccc-cCccccc
Q 015250 185 NEFIFSGR-LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEE-VGSDSYQ 239 (410)
Q Consensus 185 ~~~i~gka-lDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEE-VGsrga~ 239 (410)
+++|.|++ .|+..++++++.|++.++.... ......++++++.|| .|+.|+.
T Consensus 131 dg~iyGRGa~D~Kg~~aa~l~a~~~l~~~~~---~~~~~i~~~~~~dEE~~g~~G~~ 184 (472)
T PRK09133 131 NGYFYGRGTSDDKADAAIWVATLIRLKREGF---KPKRDIILALTGDEEGTPMNGVA 184 (472)
T ss_pred CCEEEecCcccchHHHHHHHHHHHHHHhcCC---CCCCCEEEEEECccccCccchHH
Confidence 46788884 5999999999998877643210 123457889999999 5666554
No 96
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=80.27 E-value=4 Score=40.90 Aligned_cols=48 Identities=13% Similarity=-0.087 Sum_probs=36.0
Q ss_pred CceEEec-cCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCcccc
Q 015250 185 NEFIFSG-RLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSY 238 (410)
Q Consensus 185 ~~~i~gk-alDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga 238 (410)
++++.|+ ..|++.++++++.|++.+ .. . .+....++++..||.|+.|.
T Consensus 81 ~g~iyGrG~~D~Kg~~aa~l~A~~~l-~~--~---~~~~i~~~~~~dEE~g~~~~ 129 (348)
T PRK04443 81 DGVLWGRGSVDAKGPLAAFAAAAARL-EA--L---VRARVSFVGAVEEEAPSSGG 129 (348)
T ss_pred CCeEEeecccccccHHHHHHHHHHHh-cc--c---CCCCEEEEEEcccccCChhH
Confidence 3456665 689999999999999877 21 1 24457889999999997643
No 97
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=80.23 E-value=2.3 Score=43.49 Aligned_cols=52 Identities=17% Similarity=0.181 Sum_probs=36.8
Q ss_pred CceEEeccC-CcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCc-cccc
Q 015250 185 NEFIFSGRL-DNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGS-DSYQ 239 (410)
Q Consensus 185 ~~~i~gkal-Dnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGs-rga~ 239 (410)
++.+.|++- |+..++++++.|++.+.... . ..+....++|+..||+|+ +|+.
T Consensus 102 dg~iyGrG~~D~K~~~aa~l~a~~~l~~~~--~-~~~~~v~l~~~~dEE~g~~~G~~ 155 (400)
T TIGR01880 102 DGNIYARGAQDMKCVGVQYLEAVRNLKASG--F-KFKRTIHISFVPDEEIGGHDGME 155 (400)
T ss_pred CCeEEEcccccccHHHHHHHHHHHHHHHcC--C-CCCceEEEEEeCCcccCcHhHHH
Confidence 346777776 99999999998887764321 0 123457789999999986 3664
No 98
>PRK06156 hypothetical protein; Provisional
Probab=78.30 E-value=5.5 Score=42.59 Aligned_cols=13 Identities=23% Similarity=-0.054 Sum_probs=8.7
Q ss_pred cEEEEeecCCCce
Q 015250 19 FHIIAAHTDSPCL 31 (410)
Q Consensus 19 ~~mi~AH~De~g~ 31 (410)
.+++.+|||-+.-
T Consensus 111 ~l~l~gH~DvVp~ 123 (520)
T PRK06156 111 KVGILTHADVVPA 123 (520)
T ss_pred eEEEEEecCccCC
Confidence 5777777776543
No 99
>PRK07338 hypothetical protein; Provisional
Probab=78.13 E-value=2.5 Score=43.16 Aligned_cols=53 Identities=23% Similarity=0.157 Sum_probs=37.5
Q ss_pred CCceEEec-cCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccc
Q 015250 184 NNEFIFSG-RLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239 (410)
Q Consensus 184 ~~~~i~gk-alDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~ 239 (410)
.++++.|+ +.|++.|+++++.|++.+.... . .......++|+..||+|+.|+.
T Consensus 118 ~~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~--~-~~~~~i~~~~~~dEE~g~~g~~ 171 (402)
T PRK07338 118 DDGTLNGPGVADMKGGIVVMLAALLAFERSP--L-ADKLGYDVLINPDEEIGSPASA 171 (402)
T ss_pred eCCEEECCcHHhhhHHHHHHHHHHHHHHhcC--C-CCCCCEEEEEECCcccCChhhH
Confidence 35577775 4999999999998887764321 0 1233467789999999987654
No 100
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=77.78 E-value=11 Score=41.96 Aligned_cols=145 Identities=19% Similarity=0.131 Sum_probs=82.6
Q ss_pred ceEEeccCCcchhHHHHHHHHH---HcCCCCCCCCCCCceEEEEEEcccccCcccccccCCcchHHHHHHHHHhcCCCCC
Q 015250 186 EFIFSGRLDNLASSYCGLRALI---DSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHV 262 (410)
Q Consensus 186 ~~i~gkalDnr~g~~~~l~al~---~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~gA~~~~~p~~l~ri~~~~~~~~~ 262 (410)
+=+.-.+.|.-.|++.+++..+ ...+. .+ ++..+.+++.++.||-|+.|++=-+..
T Consensus 362 DSw~~Ga~dp~sGta~Ll~i~~~~~~~~k~--gw-rP~RtI~F~sWdAeEfGliGStE~~E~------------------ 420 (702)
T KOG2195|consen 362 DSWTFGAIDPNSGTALLLEIARALSKLKKR--GW-RPRRTILFASWDAEEFGLLGSTEWAEE------------------ 420 (702)
T ss_pred cccccCCcCCCccHHHHHHHHHHHHHHHHc--CC-CccceEEEEEccchhccccccHHHHHH------------------
Confidence 3343449999999888865433 33322 12 134578999999999999987722211
Q ss_pred ChhHHHHHhhccceEEEecCCCCCCCCCccccccCCCcCCCccEEEEcCCCccccCHHHHHHHHHHHHHCCCCEeEEE--
Q 015250 263 SETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFV-- 340 (410)
Q Consensus 263 ~~~~~~~~~~~s~~is~Dv~~a~~P~~~~~~~~~~~~~LG~Gpvi~~~~~~~~~t~~~~~~~l~~~A~~~~Ip~Q~~~-- 340 (410)
+...+..-.+.-+|+..+.-|+ .++ +-.++|.+...++++++...=|.-...
T Consensus 421 ----~~~~L~~~av~yin~d~~~~~~--------------~~l--------~~~~~PlL~~li~~~~k~~~~p~~~~~~~ 474 (702)
T KOG2195|consen 421 ----YLKNLKSRAVVYINVDNAVLGD--------------YTL--------HVKTTPLLTDLIEEAAKSVLSPDKGDQSN 474 (702)
T ss_pred ----HHHHhhheeEEEEeccccccCC--------------cee--------EEecCccHHHHHHHHHhccCCCCccccce
Confidence 1122233334444433332111 122 123588999999999998766653322
Q ss_pred -eecCCCCCCChHHHHhcCCCCcEEEecccc--ccccchhhh
Q 015250 341 -VRNDMGCGSTIGPILASGVGIRTVDCGIAQ--LSMHSVREI 379 (410)
Q Consensus 341 -~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~--ryMHS~~E~ 379 (410)
.... ++|++..++. ...|||++++.--- =+-||..++
T Consensus 475 ~v~~~-g~~Sd~~~F~-~~~GIpsv~~~f~~~yP~yhs~~dt 514 (702)
T KOG2195|consen 475 RVLSL-GGGSDYASFL-QFAGIPSVDFAFNRTYPFYHSTYDT 514 (702)
T ss_pred eEecc-CCCCcchhhc-cccCcceeeeeecCCcceeecccCc
Confidence 2221 3445444543 45899999886544 335665554
No 101
>PRK08262 hypothetical protein; Provisional
Probab=77.74 E-value=3.8 Score=43.18 Aligned_cols=52 Identities=19% Similarity=0.157 Sum_probs=36.2
Q ss_pred CceEEecc-CCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccc
Q 015250 185 NEFIFSGR-LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239 (410)
Q Consensus 185 ~~~i~gka-lDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~ 239 (410)
++.+.|++ .|+..++++++.|++.+++... ..+....++|+..||+|+.|+.
T Consensus 144 dg~lyGRG~~D~Kg~~aa~L~A~~~l~~~~~---~l~~~I~llf~~dEE~g~~G~~ 196 (486)
T PRK08262 144 DGYVWGRGALDDKGSLVAILEAAEALLAQGF---QPRRTIYLAFGHDEEVGGLGAR 196 (486)
T ss_pred CCEEEecCccccchhHHHHHHHHHHHHHcCC---CCCCeEEEEEecccccCCcCHH
Confidence 44566765 7999999999988876643210 1234567789999999987654
No 102
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=76.37 E-value=3.4 Score=43.47 Aligned_cols=52 Identities=17% Similarity=0.050 Sum_probs=36.7
Q ss_pred CceEEecc-CCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccc
Q 015250 185 NEFIFSGR-LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239 (410)
Q Consensus 185 ~~~i~gka-lDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~ 239 (410)
++++.|++ .|+..++++.+.|++.++.. .. ..+....++++..||+|+.|..
T Consensus 107 dg~lyGRG~~D~Kg~~~a~l~a~~~l~~~--~~-~~~~~i~~~~~~dEE~g~~g~~ 159 (466)
T TIGR01886 107 EGRIYARGASDDKGPSLAAYYAMKILKEL--GL-PPSKKIRFVVGTNEETGWVDMD 159 (466)
T ss_pred CCEEEecCccccchHHHHHHHHHHHHHHh--CC-CCCCCEEEEEECccccCcccHH
Confidence 45666665 89999999988888766432 11 1234567889999999987664
No 103
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=75.79 E-value=3.8 Score=42.11 Aligned_cols=50 Identities=12% Similarity=-0.051 Sum_probs=36.5
Q ss_pred CceEEec-cCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccc
Q 015250 185 NEFIFSG-RLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDS 237 (410)
Q Consensus 185 ~~~i~gk-alDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrg 237 (410)
++++.|+ +.|++.++++++.|++.++.... ..+....++++..||.|+.|
T Consensus 113 dg~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~---~~~~~v~~~~~~dEE~g~~~ 163 (427)
T PRK13013 113 DGRIYGRGACDMKGGLAASIIAAEAFLAVYP---DFAGSIEISGTADEESGGFG 163 (427)
T ss_pred CCEEEeccccccchHHHHHHHHHHHHHHhCC---CCCccEEEEEEeccccCChh
Confidence 4567776 89999999999988877653210 12345778899999998763
No 104
>PRK07907 hypothetical protein; Provisional
Probab=75.77 E-value=4.7 Score=42.01 Aligned_cols=49 Identities=22% Similarity=0.155 Sum_probs=35.0
Q ss_pred CceEEe-ccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccc
Q 015250 185 NEFIFS-GRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239 (410)
Q Consensus 185 ~~~i~g-kalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~ 239 (410)
+++|.| .+.|+..++++++.|++.+.. . .+....++++..||.|+.|..
T Consensus 114 ~g~lyGrG~~D~Kg~~aa~l~a~~~l~~---~---~~~~i~~~~~~dEE~g~~g~~ 163 (449)
T PRK07907 114 DGRLYGRGAADDKGGIAMHLAALRALGG---D---LPVGVTVFVEGEEEMGSPSLE 163 (449)
T ss_pred CCEEEECCccCCcHHHHHHHHHHHHhcc---C---CCCcEEEEEEcCcccCCccHH
Confidence 345655 468999999999999987721 1 233466778899999986543
No 105
>PRK06446 hypothetical protein; Provisional
Probab=75.69 E-value=3.3 Score=42.98 Aligned_cols=49 Identities=20% Similarity=0.148 Sum_probs=34.9
Q ss_pred ceEEe-ccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCcccc
Q 015250 186 EFIFS-GRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSY 238 (410)
Q Consensus 186 ~~i~g-kalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga 238 (410)
+++.| .+-|++.|+++++.|++.+... ...+....++|+..||+|+.|+
T Consensus 94 g~lyGRGa~DmKgglaa~l~A~~~l~~~----~~~~~~i~~~~~~dEE~g~~g~ 143 (436)
T PRK06446 94 GRIYARGASDNKGTLMARLFAIKHLIDK----HKLNVNVKFLYEGEEEIGSPNL 143 (436)
T ss_pred CEEEEEeccCCcHHHHHHHHHHHHHHHc----CCCCCCEEEEEEcccccCCHhH
Confidence 34544 4689999999999998766421 0123456788999999998653
No 106
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=75.10 E-value=4 Score=41.07 Aligned_cols=53 Identities=11% Similarity=-0.002 Sum_probs=37.0
Q ss_pred CceEEeccC-CcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCc-ccccc
Q 015250 185 NEFIFSGRL-DNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGS-DSYQG 240 (410)
Q Consensus 185 ~~~i~gkal-Dnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGs-rga~g 240 (410)
++++.|++- |++.++.+++.|++.+..... ..+....++|+..||.|+ +|+..
T Consensus 86 dg~~yGrG~~D~Kgg~a~~l~a~~~l~~~~~---~~~~~v~~~~~~dEE~~~~~G~~~ 140 (370)
T TIGR01246 86 DGKLYGRGAADMKGSLAAFIVAAERFVKKNP---DHKGSISLLITSDEEGTAIDGTKK 140 (370)
T ss_pred CCEEEecccccchHHHHHHHHHHHHHHHhcC---CCCCcEEEEEEeccccCCCcCHHH
Confidence 456788876 999999999888876543211 123457889999999875 45553
No 107
>PRK05469 peptidase T; Provisional
Probab=73.47 E-value=5.2 Score=41.04 Aligned_cols=43 Identities=26% Similarity=0.191 Sum_probs=31.3
Q ss_pred CCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccc
Q 015250 193 LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239 (410)
Q Consensus 193 lDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~ 239 (410)
.|+..|+++++.|++.++... . ..+..+.++|+..||+| .|+.
T Consensus 139 ~D~Kgglaa~l~a~~~l~~~~-~--~~~g~v~~~f~~dEE~g-~Ga~ 181 (408)
T PRK05469 139 ADDKAGIAEIMTALEYLIAHP-E--IKHGDIRVAFTPDEEIG-RGAD 181 (408)
T ss_pred ccchHHHHHHHHHHHHHHhCC-C--CCCCCEEEEEecccccC-CCHH
Confidence 899999999998887664320 0 12345788999999997 5544
No 108
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=72.42 E-value=4.1 Score=40.96 Aligned_cols=48 Identities=10% Similarity=-0.012 Sum_probs=34.2
Q ss_pred CceEEeccC-CcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCc
Q 015250 185 NEFIFSGRL-DNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGS 235 (410)
Q Consensus 185 ~~~i~gkal-Dnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGs 235 (410)
++.+.|++- |++.++.+++.|++.+.+.. . ......+++++..||.|.
T Consensus 89 ~g~iyGrG~~D~Kgg~aa~l~a~~~l~~~~--~-~~~~~i~~~~~~~EE~~~ 137 (375)
T PRK13009 89 DGMLYGRGAADMKGSLAAFVVAAERFVAAH--P-DHKGSIAFLITSDEEGPA 137 (375)
T ss_pred CCEEEecCCccChHHHHHHHHHHHHHHHhc--C-CCCceEEEEEEeeccccc
Confidence 457888766 99999999998887664320 0 123457789999999864
No 109
>PRK07079 hypothetical protein; Provisional
Probab=72.28 E-value=6 Score=41.53 Aligned_cols=53 Identities=17% Similarity=0.065 Sum_probs=35.5
Q ss_pred CceEEec-cCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccc
Q 015250 185 NEFIFSG-RLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239 (410)
Q Consensus 185 ~~~i~gk-alDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~ 239 (410)
++++.|+ +.|+..++++.+.|++.+.... .. ......+++++..||+|+.|..
T Consensus 117 dg~lyGRGa~DmKgg~aa~l~A~~~l~~~~-~~-~~~~~i~~~~~~dEE~g~~G~~ 170 (469)
T PRK07079 117 GDRWYGRGTADNKGQHTINLAALEQVLAAR-GG-RLGFNVKLLIEMGEEIGSPGLA 170 (469)
T ss_pred CCEEEEEeccCCcHHHHHHHHHHHHHHHhc-CC-CCCCCEEEEEECccccCCccHH
Confidence 4456665 6899999998888876653110 00 1234578899999999986554
No 110
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=71.63 E-value=3.9 Score=41.92 Aligned_cols=53 Identities=15% Similarity=0.067 Sum_probs=37.5
Q ss_pred eccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEccccc-----CcccccccCCcc
Q 015250 190 SGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEV-----GSDSYQGAGAPT 245 (410)
Q Consensus 190 gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEV-----Gsrga~gA~~~~ 245 (410)
|.++|++.|+++++++++.++... . .....+.+++++.||. |+.|++..+...
T Consensus 82 gg~~dg~~gvaa~l~a~~~l~~~g--~-~~~~~i~~~~~~dEE~~~f~~~~~Gs~~~~~~~ 139 (401)
T TIGR01879 82 GGNFDGQLGVLAGIEVVDALKEAY--V-VPLHPIEVVAFTEEEGSRFPYGMWGSRNMVGLA 139 (401)
T ss_pred CCccCCHHHHHHHHHHHHHHHHcC--C-CCCCCeEEEEEeCCcCcCcccccccHHHHhccc
Confidence 567899999999999988775431 1 1244578899999996 566666554433
No 111
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=70.16 E-value=6.2 Score=39.32 Aligned_cols=44 Identities=14% Similarity=0.079 Sum_probs=33.4
Q ss_pred CceEEeccC-CcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCc
Q 015250 185 NEFIFSGRL-DNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGS 235 (410)
Q Consensus 185 ~~~i~gkal-Dnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGs 235 (410)
+++|.|++- |++.++++++.|++.+.. .+....++|+..||+|+
T Consensus 85 ~g~i~GrG~~D~Kg~~a~~l~a~~~l~~-------~~~~i~~~~~~~EE~~~ 129 (352)
T PRK13007 85 GDRLYGCGASDMKSGLAVMLHLAATLAE-------PAHDLTLVFYDCEEVEA 129 (352)
T ss_pred CCEEEccCcccccHHHHHHHHHHHHhhc-------cCCCeEEEEEecccccC
Confidence 346666665 999999999998877732 23356788999999976
No 112
>PRK06837 acetylornithine deacetylase; Provisional
Probab=69.68 E-value=5.2 Score=41.41 Aligned_cols=51 Identities=16% Similarity=-0.001 Sum_probs=35.0
Q ss_pred CceEEeccC-CcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCcccc
Q 015250 185 NEFIFSGRL-DNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSY 238 (410)
Q Consensus 185 ~~~i~gkal-Dnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga 238 (410)
++++.|++- |++.|+++++.|++.++.... ..+...++.++..||.|..|+
T Consensus 128 ~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~---~~~~~i~~~~~~dEE~~g~g~ 179 (427)
T PRK06837 128 DGWMYGRGAADMKAGLAAMLFALDALRAAGL---APAARVHFQSVIEEESTGNGA 179 (427)
T ss_pred CCEEEecCcccchHHHHHHHHHHHHHHHcCC---CCCCcEEEEEEeccccCCHhH
Confidence 457788776 999999999988876643210 123345677888899876543
No 113
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=69.45 E-value=5.3 Score=41.27 Aligned_cols=58 Identities=12% Similarity=-0.127 Sum_probs=39.9
Q ss_pred EEeccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccC-----cccccccCCcchHH
Q 015250 188 IFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVG-----SDSYQGAGAPTMFQ 248 (410)
Q Consensus 188 i~gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVG-----srga~gA~~~~~p~ 248 (410)
-.|.++|+.+|+.+++++++.++++. . .++...-+++|..||-+ +.|++..+..+.++
T Consensus 82 ~~gG~~dg~~Gv~~~le~~~~l~~~~--~-~~~~~i~vi~~~~EEg~rf~~~~~Gs~~~~g~~~~~ 144 (406)
T TIGR03176 82 VNGGNLDGQFGALAAWLAVDYLKEKY--G-APLRTVEVLSMAEEEGSRFPYVFWGSKNIFGLAKPE 144 (406)
T ss_pred CCCCccCchhhHHHHHHHHHHHHHcC--C-CCCCCeEEEEeccccCccCCcccccHHHHhCCCCHH
Confidence 35889999999999999998886431 1 12334556677788865 66666666555444
No 114
>PLN02280 IAA-amino acid hydrolase
Probab=66.98 E-value=16 Score=38.88 Aligned_cols=78 Identities=12% Similarity=-0.031 Sum_probs=52.7
Q ss_pred cCHHHHHHHHHHHHHC-CCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccc--------cccccchhhhcCHHHHHH
Q 015250 317 TSGVTAFLFKEIAKLH-NLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIA--------QLSMHSVREICGTEDIDI 387 (410)
Q Consensus 317 t~~~~~~~l~~~A~~~-~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP--------~ryMHS~~E~~~~~D~~~ 387 (410)
.++.+.+.+++++.+. |.+..... ...+|+|++.+... ++|++..++- ...+|++.|.++.+++..
T Consensus 387 n~~~l~~~~~~~a~~~~G~~~~~~~---~~~~g~tD~~~~~~--~vP~i~~glG~~~~~~G~~~~~Htp~e~id~~~L~~ 461 (478)
T PLN02280 387 NNDAMYEHVRKVAIDLLGPANFTVV---PPMMGAEDFSFYSQ--VVPAAFYYIGIRNETLGSTHTGHSPYFMIDEDVLPI 461 (478)
T ss_pred CCHHHHHHHHHHHHHhcCccccccC---CCCeeechHHHHHh--hCCEEEEEEeecCCCCCCCCCCCCCCCcCCHHHHHH
Confidence 3778888888888663 55422111 11245555544433 4999977422 236899999999999999
Q ss_pred HHHHHHHHHhhc
Q 015250 388 AYRHFKAFYESF 399 (410)
Q Consensus 388 ~~~ll~af~~~~ 399 (410)
.++++..++..+
T Consensus 462 ~~~~~~~~~~~~ 473 (478)
T PLN02280 462 GAAVHAAIAERY 473 (478)
T ss_pred HHHHHHHHHHHH
Confidence 999998888654
No 115
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=65.73 E-value=7.8 Score=42.25 Aligned_cols=59 Identities=10% Similarity=-0.162 Sum_probs=38.8
Q ss_pred EEeccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEccccc-----CcccccccCCcchHHH
Q 015250 188 IFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEV-----GSDSYQGAGAPTMFQA 249 (410)
Q Consensus 188 i~gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEV-----Gsrga~gA~~~~~p~~ 249 (410)
..|.++|++.|+.+++++++.++... . ..+....+++|+.||- ++.|.+..+..+.++.
T Consensus 264 ~~gG~~DG~~Gv~a~lea~~~l~~~~--~-~~~~~i~vv~~~~EEg~rF~~~~~GS~~~~G~~~~~~ 327 (591)
T PRK13590 264 RNGGKYDGRLGIFVPMACVRELHRQG--R-RLPFGLEVVGFAEEEGQRYKATFLGSGALIGDFDPAW 327 (591)
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHcC--C-CCCCCeEEEEecCCccccCCccccchHHHhCCChHHH
Confidence 45788999999999999998886431 1 1223467788999996 2444443333444443
No 116
>PRK13365 protocatechuate 4,5-dioxygenase subunit beta; Provisional
Probab=65.66 E-value=46 Score=32.84 Aligned_cols=121 Identities=11% Similarity=-0.056 Sum_probs=75.0
Q ss_pred HHhhccceEEEecCCCCCCCC-CccccccCCCcCCCccEEEEcCC-------CccccCHHHHHHHHHHHHHCCCCEeEEE
Q 015250 269 CTIRQSFLVSADMAHGVHPNF-SEKHEEHHRPEMQKGLVIKHNAN-------QRYATSGVTAFLFKEIAKLHNLPTQEFV 340 (410)
Q Consensus 269 ~~~~~s~~is~Dv~~a~~P~~-~~~~~~~~~~~LG~Gpvi~~~~~-------~~~~t~~~~~~~l~~~A~~~~Ip~Q~~~ 340 (410)
+..+||.+|.++.-|.. +| .+..+ +..+|.|..+...+- -.+-.|+.+++.|.+.+.+.+++.....
T Consensus 45 ~~~~PDviVvi~sdH~~--~f~~d~~p---~f~Ig~~~~~~~~~~g~~~~~~~~~~g~~eLA~~i~~~~~~~g~~~~~~~ 119 (279)
T PRK13365 45 AEQKADVLVFFYNDHCT--TFFFDLYP---TFALGVGERFPVADEGAGLRPLPPIRGDVQLQAHIAECLVNDEFDLTVFQ 119 (279)
T ss_pred HHhCCCEEEEEcCchHH--HhccccCC---ceEEEecccccccccccCCCCCCCCCCCHHHHHHHHHHHHHcCCCeeecc
Confidence 44789999999877764 22 11100 122344443321110 1245599999999999999999987532
Q ss_pred eecCCCCCCChHHHHhcCC--C---CcEEEeccccccccchhhhcCHHHHHHHHHHHHHHHhhcc
Q 015250 341 VRNDMGCGSTIGPILASGV--G---IRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFS 400 (410)
Q Consensus 341 ~~~d~~~G~t~g~i~~s~~--G---i~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af~~~~~ 400 (410)
.+ .--=++.-|....+. . +|++-|++++.+ ++ +.+.+....+-+.|..++++++
T Consensus 120 ~~--~lDHG~~vPL~~l~~~~~~~~~pvVpi~in~~~-~p---~~~~~~~~~lG~al~~~i~~~~ 178 (279)
T PRK13365 120 DK--PIDHGCAAPLPLLWPHVPDWPGTVVPIAINVLQ-YP---LPTARRCYRLGQALRRAIESYP 178 (279)
T ss_pred CC--CCCchhhhHHHHhCCccccCCCCeEEEEEeccc-CC---CCCHHHHHHHHHHHHHHHHhcC
Confidence 11 011145556544432 3 889999988764 22 3357788888899999988764
No 117
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=64.41 E-value=7.8 Score=39.86 Aligned_cols=41 Identities=27% Similarity=0.266 Sum_probs=29.9
Q ss_pred ccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccC
Q 015250 191 GRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVG 234 (410)
Q Consensus 191 kalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVG 234 (410)
..+|++.|+++++.|++.++... . ......++++++.||.|
T Consensus 89 g~~d~k~g~aa~l~a~~~l~~~~--~-~~~~~i~~~~~~dEE~g 129 (413)
T PRK09290 89 GRFDGPLGVLAGLEAVRTLNERG--I-RPRRPIEVVAFTNEEGS 129 (413)
T ss_pred CCcCCHHHHHHHHHHHHHHHHcC--C-CCCCCeEEEEEcCCccc
Confidence 45799999999998888775321 1 12345788999999995
No 118
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=64.38 E-value=11 Score=38.44 Aligned_cols=50 Identities=14% Similarity=0.064 Sum_probs=34.2
Q ss_pred CceEEeccC-CcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCc
Q 015250 185 NEFIFSGRL-DNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGS 235 (410)
Q Consensus 185 ~~~i~gkal-Dnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGs 235 (410)
++++.|++- |+..|+++++.|++.+...... ........+++++.||+|+
T Consensus 93 ~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~-~~~~~~i~~~~~~dEE~~~ 143 (373)
T TIGR01900 93 DGILWGCGATDMKAGDAVMLHLAATLDGRAPE-TELKHDLTLIAYDCEEVAA 143 (373)
T ss_pred CCEEEecCchhhhHHHHHHHHHHHHHhhhccc-cCCCCCEEEEEEecccccC
Confidence 456777776 9999999999888766310000 0123456788999999974
No 119
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=63.55 E-value=8.5 Score=40.38 Aligned_cols=51 Identities=20% Similarity=0.136 Sum_probs=35.9
Q ss_pred ceEEe-ccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccc
Q 015250 186 EFIFS-GRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239 (410)
Q Consensus 186 ~~i~g-kalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~ 239 (410)
+++.| .+.|+..++++++.|+..++.. .. .......++|+..||+|+.|..
T Consensus 97 g~lyGRGa~D~KG~laa~l~a~~~l~~~--~~-~~~~~i~~~~~~dEE~g~~g~~ 148 (447)
T TIGR01887 97 GRIYGRGTLDDKGPTIAALYAMKILKEL--GL-KLKKKIRFIFGTDEETGWACID 148 (447)
T ss_pred CEEEECCcccCcHHHHHHHHHHHHHHHc--CC-CCCCcEEEEEECCcccCcHhHH
Confidence 45555 4589999999999888766432 11 1234567889999999987755
No 120
>cd07950 Gallate_Doxase_N The N-terminal domain of the Class III extradiol dioxygenase, Gallate Dioxygenase, which catalyzes the oxidization and subsequent ring-opening of gallate. Gallate Dioxygenase catalyzes the oxidization and subsequent ring-opening of gallate, an intermediate in the degradation of the aromatic compound, syringate. The reaction product of gallate dioxygenase is 4-oxalomesaconate. The amino acid sequence of the N-terminal and C-terminal regions of gallate dioxygenase exhibits homology with the sequence of PCA 4,5-dioxygenase B (catalytic) and A subunits, respectively. The enzyme is estimated to be a homodimer according to the Escherichia coli enzyme. LigAB-like enzymes are usually composed of two subunits, designated A and B, which form a tetramer composed of two copies of each subunit. In this subfamily, the subunits A and B are fused to make a single polypeptide chain. The dimer interface for this subfamily may resemble the tetramer interface of classical LigAB en
Probab=63.32 E-value=35 Score=33.60 Aligned_cols=121 Identities=10% Similarity=0.021 Sum_probs=72.1
Q ss_pred HHhhccceEEEecCCCCCCCC-CccccccCCCcCCCccEEEEcCC-------CccccCHHHHHHHHHHHHHCCCCEeEEE
Q 015250 269 CTIRQSFLVSADMAHGVHPNF-SEKHEEHHRPEMQKGLVIKHNAN-------QRYATSGVTAFLFKEIAKLHNLPTQEFV 340 (410)
Q Consensus 269 ~~~~~s~~is~Dv~~a~~P~~-~~~~~~~~~~~LG~Gpvi~~~~~-------~~~~t~~~~~~~l~~~A~~~~Ip~Q~~~ 340 (410)
+..+||.+|.++.-|+.. | .+..+ ...+|.|..+...+. ..+..|+.+++.|.+.+.+.+++.....
T Consensus 45 ~~~~PD~iVvi~~dH~~~--f~~d~~p---~f~Ig~~~~~~~~d~~~~~~~~~~~~g~~~LA~~i~~~~~~~g~~~~~~~ 119 (277)
T cd07950 45 AEQKPDVLFMVYNDHVTS--FFFDHYS---AFALGVGDSYEVADEGGGPRDLPPIRGHAALAQHIAESLVADEFDLTFFQ 119 (277)
T ss_pred HHhCCCEEEEEcCcHHHH--hccccCC---cEEEEecccccccccccCCccCCCCCCCHHHHHHHHHHHHhcCCCeeecc
Confidence 457899999999666542 2 11000 112333333322111 1345599999999999999999987532
Q ss_pred eecCCCCCCChHHHHhcC-----CCCcEEEeccccccccchhhhcCHHHHHHHHHHHHHHHhhcc
Q 015250 341 VRNDMGCGSTIGPILASG-----VGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFS 400 (410)
Q Consensus 341 ~~~d~~~G~t~g~i~~s~-----~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af~~~~~ 400 (410)
.+ .. -=++.-|....+ ..+|++.|++|+...= +-+.+....+-+.|..++++++
T Consensus 120 ~~-~l-DHG~~vPL~~l~p~~~~~~~~vVpi~~~~~~~~----l~~~~~~~~lG~al~~~i~~~~ 178 (277)
T cd07950 120 DK-PL-DHGCFSPLSLLLPHEDGWPVKVVPLQVGVLQFP----LPTARRCYKLGQALRRAIESYP 178 (277)
T ss_pred CC-CC-CceeeeeHHHhCcccccCCCceEEEEEEeEecC----CCCHHHHHHHHHHHHHHHHhcC
Confidence 11 01 113334444332 2266888888876332 2256777888888999988764
No 121
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=62.73 E-value=9.4 Score=41.64 Aligned_cols=59 Identities=10% Similarity=-0.067 Sum_probs=40.2
Q ss_pred eEEeccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEccccc-----CcccccccCCcchHH
Q 015250 187 FIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEV-----GSDSYQGAGAPTMFQ 248 (410)
Q Consensus 187 ~i~gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEV-----Gsrga~gA~~~~~p~ 248 (410)
-..|.++|.++|+.+++++++.++... +. ....+.++++..||- ++-|.+..+..+.++
T Consensus 263 V~~gG~~DG~~Gv~a~l~~~~~l~~~~--~~-~~~~i~vi~~~~EEg~rF~~~~~GS~~~~G~~~~~ 326 (591)
T PRK13799 263 VRNGGKYDGREGIFLAIACVKELHEQG--ER-LPFHFEVIAFAEEEGQRFKATFLGSGALIGDFNME 326 (591)
T ss_pred cCCCCccccHHHHHHHHHHHHHHHHcC--CC-CCCCeEEEEecCCCccCCCccccchHHHhCCChHH
Confidence 356899999999999999998876431 11 233467788889996 555555555444443
No 122
>TIGR02298 HpaD_Fe 3,4-dihydroxyphenylacetate 2,3-dioxygenase. This enzyme catalyzes the ring-opening step in the degradation of 4-hydroxyphenylacetate.
Probab=62.16 E-value=1.5e+02 Score=29.22 Aligned_cols=75 Identities=16% Similarity=0.096 Sum_probs=53.0
Q ss_pred cccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCC---CChHHHHh--cCCCCcEEEeccccccccchhhhcCHHHHHHHH
Q 015250 315 YATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCG---STIGPILA--SGVGIRTVDCGIAQLSMHSVREICGTEDIDIAY 389 (410)
Q Consensus 315 ~~t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G---~t~g~i~~--s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~ 389 (410)
+-.|+.+++.|.+.+++.|||...-.. ..-| +|.-|... ....+|++.|+++++.. +..+...+-
T Consensus 92 ~~gd~eLA~~i~~~~~~~gi~~~~~~~---~~~~lDHG~~vPL~~l~p~~~ipvV~is~~~~~~-------~~~~~~~lG 161 (282)
T TIGR02298 92 YPGNPALGQLIADEAQEHGVKTLAHQV---PSLGLEYGTLVPMRYMNEDGHFKVVSIAAWCTVH-------DIEESRALG 161 (282)
T ss_pred CCCCHHHHHHHHHHHHHCCCceeeccC---CCCCCCeehHhHHHHhCCCCCCcEEEEeecCCCC-------CHHHHHHHH
Confidence 345999999999999999999873111 1123 45555443 33569999999997633 566677888
Q ss_pred HHHHHHHhhc
Q 015250 390 RHFKAFYESF 399 (410)
Q Consensus 390 ~ll~af~~~~ 399 (410)
+.|..++++.
T Consensus 162 ~al~~~i~~~ 171 (282)
T TIGR02298 162 EAIRKAIEQS 171 (282)
T ss_pred HHHHHHHHhc
Confidence 8888887764
No 123
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=61.42 E-value=9 Score=39.37 Aligned_cols=43 Identities=23% Similarity=0.230 Sum_probs=31.2
Q ss_pred eccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCc
Q 015250 190 SGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGS 235 (410)
Q Consensus 190 gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGs 235 (410)
+.++|++.|+++++.+++.++... . ..+....+++++.||.|.
T Consensus 89 ~g~~D~~~g~aa~l~a~~~l~~~~--~-~~~~~i~~~~~~dEE~~~ 131 (414)
T PRK12890 89 GGRYDGILGVLAGLEVVAALREAG--I-RPPHPLEVIAFTNEEGVR 131 (414)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHcC--C-CCCCCeEEEEEecccccc
Confidence 456899999999999888775321 0 124457889999999743
No 124
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=60.85 E-value=10 Score=38.86 Aligned_cols=50 Identities=16% Similarity=0.022 Sum_probs=34.6
Q ss_pred eccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccC-----cccccccC
Q 015250 190 SGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVG-----SDSYQGAG 242 (410)
Q Consensus 190 gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVG-----srga~gA~ 242 (410)
+..+|++.|+++++.|++.++.... ..+..+.++++..||.| +.|+....
T Consensus 91 ~g~~dgk~gvaa~l~a~~~l~~~~~---~~~~~v~~~~~~dEE~g~~~~~~~G~~~~~ 145 (412)
T PRK12893 91 GGRFDGALGVLAALEVVRTLNDAGI---RTRRPIEVVSWTNEEGARFAPAMLGSGVFT 145 (412)
T ss_pred CCcccchhhHHHHHHHHHHHHHcCC---CCCCCeEEEEEccccccccccccccHHHHh
Confidence 3457999999999988887753211 12446788999999986 55554343
No 125
>PRK13004 peptidase; Reviewed
Probab=60.80 E-value=12 Score=38.24 Aligned_cols=47 Identities=15% Similarity=-0.099 Sum_probs=32.6
Q ss_pred CceEEeccC-CcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccC
Q 015250 185 NEFIFSGRL-DNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVG 234 (410)
Q Consensus 185 ~~~i~gkal-Dnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVG 234 (410)
++.+.|++- |++.++++++.|++.+++.. . ..+...++.++..||.+
T Consensus 100 ~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~--~-~~~~~i~~~~~~~EE~~ 147 (399)
T PRK13004 100 DGRIYGRGTSDQKGGMASMVYAAKIIKDLG--L-DDEYTLYVTGTVQEEDC 147 (399)
T ss_pred CCEEEeCCccccchHHHHHHHHHHHHHhcC--C-CCCCeEEEEEEcccccC
Confidence 346777765 99999999998887765321 1 12345677888999974
No 126
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=60.30 E-value=9.2 Score=38.98 Aligned_cols=25 Identities=32% Similarity=0.308 Sum_probs=19.0
Q ss_pred ceEEEEEeCCCCCCCCCcEEEEeecCCCc
Q 015250 2 SCLVAFAVGQKYSVGNGFHIIAAHTDSPC 30 (410)
Q Consensus 2 gslia~~~g~~~~~~~~~~mi~AH~De~g 30 (410)
.|++|...|+. .+.+|+.||+|.++
T Consensus 98 ~nVIa~~~G~~----~~~Ill~AH~DTV~ 122 (346)
T PRK10199 98 STVIAAHEGKA----PQQIIIMAHLDTYA 122 (346)
T ss_pred ceEEEEECCCC----CCeEEEEEEcCcCC
Confidence 46888776643 34699999999985
No 127
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=57.00 E-value=12 Score=38.31 Aligned_cols=48 Identities=19% Similarity=0.080 Sum_probs=33.2
Q ss_pred ccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccC-----ccccccc
Q 015250 191 GRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVG-----SDSYQGA 241 (410)
Q Consensus 191 kalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVG-----srga~gA 241 (410)
..+|+|.|+++++.|++.++... . ..+....+++++.||.| ..|++..
T Consensus 90 g~~dg~~Gvaa~l~a~~~l~~~~--~-~~~~~i~~~~~~dEE~~~~~~~~~Gs~~~ 142 (412)
T PRK12892 90 GRYDGALGVVAGLEAARALNEHG--I-ATRHPLDVVAWCDEEGSRFTPGFLGSRAY 142 (412)
T ss_pred CcccchHHHHHHHHHHHHHHHcC--C-CCCCCeEEEEecCcccccccCccccHHHH
Confidence 45799999999999988775321 0 12345788999999983 4555443
No 128
>PRK07906 hypothetical protein; Provisional
Probab=56.13 E-value=14 Score=38.02 Aligned_cols=48 Identities=13% Similarity=0.123 Sum_probs=33.5
Q ss_pred CceEEecc-CCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCc
Q 015250 185 NEFIFSGR-LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGS 235 (410)
Q Consensus 185 ~~~i~gka-lDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGs 235 (410)
++++.|++ .|+..++++++.|++.++... . ..+....++|+..||+|+
T Consensus 95 dg~iyGrG~~D~Kg~~a~~l~a~~~l~~~~--~-~~~~~i~~~~~~dEE~g~ 143 (426)
T PRK07906 95 DGYVWGRGAVDMKDMDAMMLAVVRHLARTG--R-RPPRDLVFAFVADEEAGG 143 (426)
T ss_pred CCEEEecCccccchHHHHHHHHHHHHHHcC--C-CCCccEEEEEecCcccch
Confidence 34565554 699999999999987764320 0 123456789999999975
No 129
>cd07372 2A5CPDO_B The beta subunit of the Class III extradiol dioxygenase, 2-amino-5-chlorophenol 1,6-dioxygenase, which catalyzes the oxidization and subsequent ring-opening of 2-amino-5-chlorophenol. 2-amino-5-chlorophenol 1,6-dioxygenase (2A5CPDO), catalyzes the oxidization and subsequent ring-opening of 2-amino-5-chlorophenol, which is an intermediate during p-chloronitrobenzene degradation. This enzyme is a member of the class III extradiol dioxygenase family, a group of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. The active 2A5CPDO enzyme is probably a heterotetramer, composed of two alpha and two beta subunits. The alpha and beta subunits share significant sequence similarity and may have evolved by gene duplication. This model describes the beta subunit, which contains a putative metal binding site with two conserved histidines; these residues are equivalent to two out of three Fe(II) bindin
Probab=54.94 E-value=1.5e+02 Score=29.37 Aligned_cols=83 Identities=12% Similarity=-0.047 Sum_probs=53.9
Q ss_pred ccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcC--CCCcEEEeccccccc-cchhhhcCHHHHHHHHHHH
Q 015250 316 ATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASG--VGIRTVDCGIAQLSM-HSVREICGTEDIDIAYRHF 392 (410)
Q Consensus 316 ~t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~--~Gi~ti~igiP~ryM-HS~~E~~~~~D~~~~~~ll 392 (410)
-.|+.+++.|.+.|++.||+...-....-.--=+|.-|....+ ..+|++.|+++++.- +... -...+...+-+.|
T Consensus 95 ~gd~eLA~~i~~~~~~~Gi~~~~~~~~~~~LDHGt~vPL~fl~p~~~~pvV~is~~~l~~~~~~~--~~~~~~~~lG~ai 172 (294)
T cd07372 95 NVDVELAEACCEEGRKAGLVTKMMRNPRFRVDYGTITTLHMIRPQWDIPVVGISANNTPYYLNTK--EGLGEMDVLGKAT 172 (294)
T ss_pred CCCHHHHHHHHHHHHHCCCCeeeccCCCCCCCchHHHHHHHhCCCCCCcEEEEecCccccccccc--CCHHHHHHHHHHH
Confidence 4599999999999999999997421111001124555655443 469999999876431 1111 3367777788888
Q ss_pred HHHHhhcc
Q 015250 393 KAFYESFS 400 (410)
Q Consensus 393 ~af~~~~~ 400 (410)
...+++.+
T Consensus 173 ~~al~~~~ 180 (294)
T cd07372 173 REAIRKTG 180 (294)
T ss_pred HHHHHhcC
Confidence 88777664
No 130
>cd07362 HPCD_like Class III extradiol dioxygenases with similarity to homoprotocatechuate 2,3-dioxygenase, which catalyzes the key ring cleavage step in the metabolism of homoprotocatechuate. This subfamily of class III extradiol dioxygenases consists of two types of proteins with known enzymatic activities; 3,4-dihydroxyphenylacetate (homoprotocatechuate) 2,3-dioxygenase (HPCD) and 2-amino-5-chlorophenol 1,6-dioxygenase. HPCD catalyzes the key ring cleavage step in the metabolism of homoprotocatechuate (hpca), a central intermediate in the bacterial degradation of aromatic compounds. The enzyme incorporates both atoms of molecular oxygen into hpca, resulting in aromatic ring-opening to yield the product alpha-hydroxy-delta-carboxymethyl cis-muconic semialdehyde. 2-amino-5-chlorophenol 1,6-dioxygenase catalyzes the oxidization and subsequent ring-opening of 2-amino-5-chlorophenol, which is an intermediate during p-chloronitrobenzene degradation. The enzyme is probably a heterotetrame
Probab=54.61 E-value=2e+02 Score=28.11 Aligned_cols=75 Identities=12% Similarity=-0.064 Sum_probs=50.5
Q ss_pred cccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCC---CChHHHHhc--CCCCcEEEeccccccccchhhhcCHHHHHHHH
Q 015250 315 YATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCG---STIGPILAS--GVGIRTVDCGIAQLSMHSVREICGTEDIDIAY 389 (410)
Q Consensus 315 ~~t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G---~t~g~i~~s--~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~ 389 (410)
+-.|+.+++.|.+.+++.||+...... ..-| ++.-|.... ...+|++-+++++- ..+.+....+-
T Consensus 88 ~~g~~~LA~~i~~~l~~~Gi~~~~~~~---~~~~lDHG~~vPL~~l~p~~~iPVV~vs~~~~-------~~~~~~~~~lG 157 (272)
T cd07362 88 YPGDPELGRLLVEEGQEAGLRVKAVND---PTYIWDYGTVVPLRYLNPNKDIPVVSISACWT-------AASLEESYTWG 157 (272)
T ss_pred CCCCHHHHHHHHHHHHHcCCceeeccC---CCCCCCcchHHHHHHhCCCCCCcEEEEeccCC-------CCCHHHHHHHH
Confidence 345999999999999999999874211 1123 455555543 35699999999875 23455556666
Q ss_pred HHHHHHHhhc
Q 015250 390 RHFKAFYESF 399 (410)
Q Consensus 390 ~ll~af~~~~ 399 (410)
+.|.+.++.+
T Consensus 158 ~ai~~al~~~ 167 (272)
T cd07362 158 EVIGKALLES 167 (272)
T ss_pred HHHHHHHHhh
Confidence 6666777665
No 131
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=54.51 E-value=10 Score=39.67 Aligned_cols=53 Identities=15% Similarity=0.082 Sum_probs=36.9
Q ss_pred CCCceEEeccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccc
Q 015250 183 ANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239 (410)
Q Consensus 183 ~~~~~i~gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~ 239 (410)
+++..+.| .||++|...++.+|.-+..+.+++ ......++|+..||+|.||+.
T Consensus 135 ~dGa~LLg--aD~kAGia~i~~al~~~~~~~~~i--~h~~i~~g~s~~Ee~g~rg~~ 187 (414)
T COG2195 135 TDGATLLG--ADDKAGIAEIMTALSVLREKHPEI--PHGGIRGGFSPDEEIGGRGAA 187 (414)
T ss_pred ccCccccC--CcchhHHHHHHHHHHHHhhcCccc--cccCeEEEecchHHhhhhhhh
Confidence 44444444 799999999998887665321122 244567789999999998665
No 132
>PRK08737 acetylornithine deacetylase; Provisional
Probab=51.54 E-value=19 Score=36.60 Aligned_cols=41 Identities=12% Similarity=0.022 Sum_probs=29.8
Q ss_pred CceEEecc-CCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCc
Q 015250 185 NEFIFSGR-LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGS 235 (410)
Q Consensus 185 ~~~i~gka-lDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGs 235 (410)
++++.|++ .|.+.++++++.|+... .....++|++.||+|+
T Consensus 92 ~g~lyGrGa~DmKg~~aa~l~a~~~~----------~~~v~~~~~~dEE~g~ 133 (364)
T PRK08737 92 DDRVIGLGVCDIKGAAAALLAAANAG----------DGDAAFLFSSDEEAND 133 (364)
T ss_pred CCEEEEECcccchHHHHHHHHHHHcc----------CCCEEEEEEcccccCc
Confidence 44666655 56678999888887642 1236889999999987
No 133
>cd07370 HPCD The Class III extradiol dioxygenase, homoprotocatechuate 2,3-dioxygenase, catalyzes the key ring cleavage step in the metabolism of homoprotocatechuate. 3,4-dihydroxyphenylacetate (homoprotocatechuate) 2,3-dioxygenase (HPCD) catalyzes the key ring cleavage step in the metabolism of homoprotocatechuate (hpca), a central intermediate in the bacterial degradation of aromatic compounds. The enzyme incorporates both atoms of molecular oxygen into hpca, resulting in aromatic ring-opening to yield alpha-hydroxy-delta-carboxymethyl cis-muconic semialdehyde. HPCD is a member of the class III extradiol dioxygenase family, a group of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon.
Probab=47.95 E-value=2.5e+02 Score=27.41 Aligned_cols=73 Identities=16% Similarity=0.066 Sum_probs=49.8
Q ss_pred cccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCC---CChHHHHhcCC--CCcEEEeccccccccchhhhcCHHHHHHHH
Q 015250 315 YATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCG---STIGPILASGV--GIRTVDCGIAQLSMHSVREICGTEDIDIAY 389 (410)
Q Consensus 315 ~~t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G---~t~g~i~~s~~--Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~ 389 (410)
+-.|+.+++.|.+.+.+.+++.+.-.. ..-+ ++.-|.+.... .+|++.|++++. .+......+-
T Consensus 90 ~~gd~ela~~i~~~~~~~g~~~~~~~~---~~~~lDhg~~vPL~~l~p~~~~pvV~is~~~~--------~~~~~~~~lG 158 (280)
T cd07370 90 YAGDPELAHLIAEEATEHGVKTLAHED---PSLPLEYGTLVPMRFMNEDDHFKVVSVAVWCT--------HDIEESRRLG 158 (280)
T ss_pred CCCCHHHHHHHHHHHHHCCCCeeeecC---CCCCCCeeHhhHHHHhCCCCCceEEEEeecCC--------CCHHHHHHHH
Confidence 455999999999999999999874211 1224 33445565543 799999999765 2455566666
Q ss_pred HHHHHHHhh
Q 015250 390 RHFKAFYES 398 (410)
Q Consensus 390 ~ll~af~~~ 398 (410)
+.|..++++
T Consensus 159 ~al~~~~~~ 167 (280)
T cd07370 159 EAIRRAIAA 167 (280)
T ss_pred HHHHHHHHh
Confidence 667666654
No 134
>COG3655 Predicted transcriptional regulator [Transcription]
Probab=47.21 E-value=16 Score=28.81 Aligned_cols=24 Identities=17% Similarity=0.311 Sum_probs=19.2
Q ss_pred hHHHHHHHHHcCCCCCCeeEEEEE
Q 015250 148 PQLMQILSQELGCGTDDIASIELN 171 (410)
Q Consensus 148 ~~~~~~~a~~~gV~~gd~v~~dl~ 171 (410)
-.-++.+.+.+.|+|||++.|+..
T Consensus 45 ~~tL~~iC~~LeCqpgDiley~~d 68 (73)
T COG3655 45 LSTLEKICKALECQPGDILEYVPD 68 (73)
T ss_pred HHHHHHHHHHcCCChhheeEEecC
Confidence 345566889999999999998754
No 135
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=46.52 E-value=36 Score=35.64 Aligned_cols=69 Identities=13% Similarity=0.140 Sum_probs=45.3
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEecc--c--cccccchhhhcCHHHHHHHHHHH
Q 015250 318 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGI--A--QLSMHSVREICGTEDIDIAYRHF 392 (410)
Q Consensus 318 ~~~~~~~l~~~A~~-~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igi--P--~ryMHS~~E~~~~~D~~~~~~ll 392 (410)
+..+.+.+.++.++ .+.+.+.... +|+|++.... +++.+|. | .+.+|++.|-++++|+..+++++
T Consensus 374 ~~~lv~~l~~~~~~~~g~~~~~~~~-----~ggtda~~~~-----~~i~~Gp~~pG~~~~aH~~dE~v~i~~l~~~~~i~ 443 (447)
T TIGR01887 374 DDPLVQTLMKVYEKQTGDEGTPVAI-----GGGTYARLME-----NGVAFGALFPGEEDTMHQANEYIMIDDLLLATAIY 443 (447)
T ss_pred CCHHHHHHHHHHHHHhCCCCCeeEe-----cchhhhhhCC-----CcEEeCCCCCCCCCCccCCCcceeHHHHHHHHHHH
Confidence 44666666666664 4666555432 3556554422 2455553 3 35589999999999999999998
Q ss_pred HHHH
Q 015250 393 KAFY 396 (410)
Q Consensus 393 ~af~ 396 (410)
..++
T Consensus 444 ~~~~ 447 (447)
T TIGR01887 444 AEAI 447 (447)
T ss_pred HHhC
Confidence 8753
No 136
>cd07371 2A5CPDO_AB The alpha and beta subunits of the Class III extradiol dioxygenase, 2-amino-5-chlorophenol 1,6-dioxygenase, which catalyzes the oxidization and subsequent ring-opening of 2-amino-5-chlorophenol. This subfamily contains both alpha and beta subunits of 2-amino-5-chlorophenol 1,6-dioxygenase (2A5CPDO), which catalyzes the oxidization and subsequent ring-opening of 2-amino-5-chlorophenol, an intermediate during p-chloronitrobenzene degradation. 2A5CPDO is a member of the class III extradiol dioxygenase family, a group of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. The active enzyme is probably a heterotetramer, composed of two alpha and two beta subunits. Alpha and beta subunits share significant sequence similarity and may have evolved by gene duplication.
Probab=46.24 E-value=1.6e+02 Score=28.73 Aligned_cols=74 Identities=15% Similarity=-0.015 Sum_probs=51.4
Q ss_pred ccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCC---CChHHHHhc--CCCCcEEEeccccccccchhhhcCHHHHHHHHH
Q 015250 316 ATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCG---STIGPILAS--GVGIRTVDCGIAQLSMHSVREICGTEDIDIAYR 390 (410)
Q Consensus 316 ~t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G---~t~g~i~~s--~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ 390 (410)
-.|+.+++.|.+.++++||+......+ .-+ +|.-|.... ...+|++.+++++. +.+.+....+-+
T Consensus 84 ~g~~eLA~~i~~~~~~~gi~~~~~~~~---~~~lDHG~~vPL~~l~p~~~ipvV~vs~~~~-------~~~~~~~~~lG~ 153 (268)
T cd07371 84 NVDVELAEACVEEGRKAGLVTRMMRYP---RFPIDTGTITALTLMRPGTDIPPVVISANNL-------YLSGEETEGEMD 153 (268)
T ss_pred CCCHHHHHHHHHHHHHCCCcEEEecCC---CCCCCchhHHHHHHhcCCCCCCeEEEEecCc-------CCCHHHHHHHHH
Confidence 349999999999999999998752111 122 455565543 36789999998877 245566677777
Q ss_pred HHHHHHhhc
Q 015250 391 HFKAFYESF 399 (410)
Q Consensus 391 ll~af~~~~ 399 (410)
.|.+.+++.
T Consensus 154 al~~~l~~~ 162 (268)
T cd07371 154 LAGKATRDA 162 (268)
T ss_pred HHHHHHHHc
Confidence 777666654
No 137
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=43.90 E-value=25 Score=39.73 Aligned_cols=52 Identities=19% Similarity=-0.019 Sum_probs=40.0
Q ss_pred EeccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCcccccccCC
Q 015250 189 FSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGA 243 (410)
Q Consensus 189 ~gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~gA~~ 243 (410)
..+|=||-.+|++++|+++-..+.++.+ ...+++.|+..||-++.|+.+-..
T Consensus 158 ~~gAtDDg~~va~mLe~lRv~s~~~~~l---~~~vVFLfNgaEE~~L~gsH~FIt 209 (834)
T KOG2194|consen 158 GPGATDDGSGVASMLEALRVLSKSDKLL---THSVVFLFNGAEESGLLGSHAFIT 209 (834)
T ss_pred CCCCCcchhHHHHHHHHHHHhhcCCCcc---cccEEEEecCcccchhhhccccee
Confidence 4677899999999999998775432112 345788999999999999887654
No 138
>cd05565 PTS_IIB_lactose PTS_IIB_lactose: subunit IIB of enzyme II (EII) of the lactose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS) found in Firmicutes as well as Actinobacteria. In this system, EII is a lactose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. The IIC and IIB domains are expressed as a single protein from the lac operon. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include lactose, chitobiose/lichenan, ascorbate, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.
Probab=40.87 E-value=66 Score=26.73 Aligned_cols=51 Identities=20% Similarity=0.041 Sum_probs=37.3
Q ss_pred ccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEecccccccc
Q 015250 316 ATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMH 374 (410)
Q Consensus 316 ~t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMH 374 (410)
+|+.-+...+++.|+++|++++.... +.+.+.....+.-.+.++-.+||+-
T Consensus 11 aSSs~la~km~~~a~~~gi~~~i~a~--------~~~e~~~~~~~~Dvill~PQv~~~~ 61 (99)
T cd05565 11 GTSGLLANALNKGAKERGVPLEAAAG--------AYGSHYDMIPDYDLVILAPQMASYY 61 (99)
T ss_pred CCHHHHHHHHHHHHHHCCCcEEEEEe--------eHHHHHHhccCCCEEEEcChHHHHH
Confidence 67889999999999999999997653 1222333345667888888888753
No 139
>PLN02693 IAA-amino acid hydrolase
Probab=40.50 E-value=70 Score=33.42 Aligned_cols=79 Identities=13% Similarity=-0.053 Sum_probs=52.3
Q ss_pred ccCHHHHHHHHHHHHH-CCCCEeEEEeecCCCCCCChHHHHhcCCCCcEE--Eeccc-----cccccchhhhcCHHHHHH
Q 015250 316 ATSGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTV--DCGIA-----QLSMHSVREICGTEDIDI 387 (410)
Q Consensus 316 ~t~~~~~~~l~~~A~~-~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti--~igiP-----~ryMHS~~E~~~~~D~~~ 387 (410)
..|+.+.+.+++.+++ .|.+...... ..+|+++..+... .+|++ .+|.- .-.+||+.+.++-+-+..
T Consensus 334 ~nd~~l~~~~~~~~~~~~G~~~~~~~~---~~~gseDf~~~~~--~vP~~~~~lG~~~~~~~~~~~H~~~f~~de~~l~~ 408 (437)
T PLN02693 334 VNNMDLYKQFKKVVRDLLGQEAFVEAA---PEMGSEDFSYFAE--TIPGHFSLLGMQDETNGYASSHSPLYRINEDVLPY 408 (437)
T ss_pred cCCHHHHHHHHHHHHHhcCCcceeecC---CCceechHHHHHH--HhhhhEEEEecCCCCCCCCCCCCCCcCCCHHHHHH
Confidence 3477899999999998 4765322111 1245555544443 67886 55542 236899999999999988
Q ss_pred HHHHHHHHHhhc
Q 015250 388 AYRHFKAFYESF 399 (410)
Q Consensus 388 ~~~ll~af~~~~ 399 (410)
.++++..++.++
T Consensus 409 ~~~~~~~~~~~~ 420 (437)
T PLN02693 409 GAAIHATMAVQY 420 (437)
T ss_pred HHHHHHHHHHHH
Confidence 888776665544
No 140
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=39.88 E-value=34 Score=35.61 Aligned_cols=53 Identities=15% Similarity=0.112 Sum_probs=39.8
Q ss_pred EEeccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccC-cccccccCC
Q 015250 188 IFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVG-SDSYQGAGA 243 (410)
Q Consensus 188 i~gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVG-srga~gA~~ 243 (410)
+.=.+.|+.....+.++|++.+..+. . ....+.++.|-..||+| -.|+.+.+.
T Consensus 123 yaRGaqD~K~~~va~leAir~L~~~g--~-kp~Rti~lsfvpDEEi~G~~Gm~~fa~ 176 (420)
T KOG2275|consen 123 YARGAQDMKCVGVAYLEAIRNLKASG--F-KPKRTIHLSFVPDEEIGGHIGMKEFAK 176 (420)
T ss_pred EeccccchHhHHHHHHHHHHHHHhcC--C-CcCceEEEEecCchhccCcchHHHHhh
Confidence 34457999999999999999886431 1 13456677888899999 778877776
No 141
>cd07364 PCA_45_Dioxygenase_B Subunit B of the Class III extradiol dioxygenase, Protocatechuate 4,5-dioxygenase, which catalyzes the oxidization and subsequent ring-opening of protocatechuate. Protocatechuate 4,5-dioxygenase (LigAB) catalyzes the oxidization and subsequent ring-opening of protocatechuate (or 3,4-dihydroxybenzoic acid, PCA), an intermediate in the breakdown of lignin and other compounds. Protocatechuate 4,5-dioxygenase is an aromatic ring opening dioxygenase belonging to the class III extradiol enzyme family, a group of enyzmes that cleaves aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon using a non-heme Fe(II). LigAB is composed of two subunits, designated A and B, which form a tetramer composed of two copies of each subunit. The B subunit (LigB) is the catalytic subunit of LigAB.
Probab=38.50 E-value=2.7e+02 Score=27.43 Aligned_cols=122 Identities=7% Similarity=-0.080 Sum_probs=73.3
Q ss_pred HHhhccceEEEecCCCCCCCCCccccccCCCcCCCccEEEEcC-------CCccccCHHHHHHHHHHHHHCCCCEeEEEe
Q 015250 269 CTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNA-------NQRYATSGVTAFLFKEIAKLHNLPTQEFVV 341 (410)
Q Consensus 269 ~~~~~s~~is~Dv~~a~~P~~~~~~~~~~~~~LG~Gpvi~~~~-------~~~~~t~~~~~~~l~~~A~~~~Ip~Q~~~~ 341 (410)
+..+||.+|.+-..|.. +|....-+ .-.+|-|..+.-.+ ...+-.|+.+++.|.+.+.+.||+......
T Consensus 45 ~~~~pD~vVvi~~dH~~--~f~~~~~P--~f~i~~~~~~~~~~~~~g~~~~~~~~g~~~LA~~i~~~~~~~g~~~~~~~~ 120 (277)
T cd07364 45 KKNKPDVAIIVYNDHAS--AFDLDIIP--TFAIGTAEEFQPADEGYGPRPVPDVQGHPDLAWHIAQSLILDDFDMTIVNE 120 (277)
T ss_pred HHhCCCEEEEEcCchHH--hhcccCCC--ceEEeeccccccCccccCCCCCCCCCCCHHHHHHHHHHHHHcCCCEEecCC
Confidence 45799999998556653 22211000 12244444333111 012556999999999999999999865321
Q ss_pred ecCCCCCCChHHHHhcCC---C--CcEEEeccccccccchhhhcCHHHHHHHHHHHHHHHhhcc
Q 015250 342 RNDMGCGSTIGPILASGV---G--IRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFS 400 (410)
Q Consensus 342 ~~d~~~G~t~g~i~~s~~---G--i~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af~~~~~ 400 (410)
+ . --=++.-|.....- + +|++-+++++.+.- +.+.+....+-+.|..++++++
T Consensus 121 ~-~-lDHG~~vPL~~l~p~~~~~p~pVV~vsvn~~~~p----~~~~~~~~~lG~al~~~i~~~~ 178 (277)
T cd07364 121 M-D-VDHGLTVPLSIMYGQPEAWPCKVIPLCVNVVQYP----QPTGKRCFALGKAIRRAVESYD 178 (277)
T ss_pred C-C-CCcchhhhHHHhCCccccCCCCeEEEEeccCCCC----CCCHHHHHHHHHHHHHHHHhcC
Confidence 1 0 01144445544332 3 67888887665431 4467888999999999998874
No 142
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=35.91 E-value=39 Score=34.79 Aligned_cols=42 Identities=21% Similarity=0.246 Sum_probs=30.4
Q ss_pred eccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccC
Q 015250 190 SGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVG 234 (410)
Q Consensus 190 gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVG 234 (410)
|...|+..|+++++.|++.++... . .....+.++++..||.|
T Consensus 91 gg~~D~k~Gv~a~l~a~~~l~~~~--~-~~~~~i~v~~~~dEE~~ 132 (414)
T PRK12891 91 GGRYDGIYGVLGGLEVVRALNDAG--I-ETERPVDVVIWTNEEGS 132 (414)
T ss_pred CccccchhhHHHHHHHHHHHHHcC--C-CCCCCeEEEEecccccC
Confidence 456799999999999988775421 1 12345677899999985
No 143
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=32.75 E-value=1.5e+02 Score=23.62 Aligned_cols=34 Identities=6% Similarity=-0.002 Sum_probs=24.7
Q ss_pred CCccEEEEcCCCccccCHHHHHHHHHHHHHCCCCEeEE
Q 015250 302 QKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEF 339 (410)
Q Consensus 302 G~Gpvi~~~~~~~~~t~~~~~~~l~~~A~~~~Ip~Q~~ 339 (410)
|+.-.+-+..+. ++.+...+..+|++++||+.++
T Consensus 26 gkaklViiA~D~----~~~~~~~i~~~c~~~~Vp~~~~ 59 (82)
T PRK13602 26 GSVKEVVVAEDA----DPRLTEKVEALANEKGVPVSKV 59 (82)
T ss_pred CCeeEEEEECCC----CHHHHHHHHHHHHHcCCCEEEE
Confidence 444444444343 6679999999999999999765
No 144
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=32.03 E-value=46 Score=33.43 Aligned_cols=48 Identities=10% Similarity=-0.113 Sum_probs=27.2
Q ss_pred ceEEeccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccc
Q 015250 186 EFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239 (410)
Q Consensus 186 ~~i~gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~ 239 (410)
+.+.|..-| .++++++.|++.++.... ..+....++|++.||+| .|+.
T Consensus 84 g~l~g~G~~--~~~a~~l~a~~~l~~~~~---~~~~~i~~~~~~dEE~~-~G~~ 131 (363)
T TIGR01891 84 GVMHACGHD--LHTAILLGTAKLLKKLAD---LLEGTVRLIFQPAEEGG-GGAT 131 (363)
T ss_pred CceecCcCH--HHHHHHHHHHHHHHhchh---hCCceEEEEEeecCcCc-chHH
Confidence 345565554 455666666655432100 12345778999999985 4443
No 145
>PRK10602 murein peptide amidase A; Provisional
Probab=31.47 E-value=3.2e+02 Score=26.36 Aligned_cols=71 Identities=13% Similarity=0.093 Sum_probs=46.8
Q ss_pred CHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHHHHh
Q 015250 318 SGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYE 397 (410)
Q Consensus 318 ~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af~~ 397 (410)
++...+..+++|+..+.|+=..+. .+.+++.+.... ..|||++.+=+|. +.+..+++...+-+..+++
T Consensus 165 ~~~~~~~~~~la~af~~~~~~~~~---y~~~Gs~~~~a~-~~giP~it~El~~--------~~~~~~v~~~~~~~~~~l~ 232 (237)
T PRK10602 165 DPRHSELGEWLAQAFELPLVTSVG---YETPGSFGSWCA-DLNLHCITAELPP--------ISADEASEKYLFAMANLLR 232 (237)
T ss_pred CccchHHHHHHHHHhCCCeEeecC---CCCCCcHHHHHH-HcCCcEEEEecCC--------cCcHHHHHHHHHHHHHHHh
Confidence 445567778889999988544321 222334433322 4799999998885 6777777877777777776
Q ss_pred hcc
Q 015250 398 SFS 400 (410)
Q Consensus 398 ~~~ 400 (410)
...
T Consensus 233 ~~~ 235 (237)
T PRK10602 233 WHP 235 (237)
T ss_pred ccc
Confidence 543
No 146
>cd07367 CarBb CarBb is the B subunit of the Class III Extradiol ring-cleavage dioxygenase, 2-aminophenol 1,6-dioxygenase, which catalyzes the oxidization and subsequent ring-opening of 2-aminophenyl-2,3-diol. CarBb is the B subunit of 2-aminophenol 1,6-dioxygenase (CarB), which catalyzes the oxidization and subsequent ring-opening of 2-aminophenyl-2,3-diol. It is a key enzyme in the carbazole degradation pathway isolated from bacterial strains with carbazole degradation ability. The enzyme is a heterotetramer composed of two A and two B subunits. CarB belongs to the class III extradiol dioxygenase family, a group of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. Although the enzyme was originally isolated as a meta-cleavage enzyme for 2'-aminobiphenyl-2,3-diol involved in carbazole degradation, it has also shown high specificity for 2,3-dihydroxybiphenyl.
Probab=31.37 E-value=5e+02 Score=25.24 Aligned_cols=78 Identities=10% Similarity=-0.020 Sum_probs=55.7
Q ss_pred cccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhc--CCCCcEEEeccccccccchhhhcCHHHHHHHHHHH
Q 015250 315 YATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILAS--GVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHF 392 (410)
Q Consensus 315 ~~t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s--~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll 392 (410)
+-.|+.+++.|.+.+++.||+.-....+ ..-- ++.-|.... ...+|++-|++++.+ . .+.+.+....+-+.|
T Consensus 86 ~~gd~~LA~~i~~~l~~~g~~~~~~~~~-~lDH-G~~vPL~~l~p~~~iPvV~isin~~~--~--p~~~~~~~~~lG~al 159 (268)
T cd07367 86 FPGHREFARAFVRQAAEDGFDLAQAEEL-RPDH-GVMVPLLFMGPKLDIPVVPLIVNINT--D--PAPSPRRCWALGKVL 159 (268)
T ss_pred CCCCHHHHHHHHHHHHHcCCCeeeecCc-cCCc-chhchHHHhCCCCCCCEEEEEecccC--C--CCCCHHHHHHHHHHH
Confidence 5569999999999999999988643211 0111 333354433 367999999998763 2 255778889999999
Q ss_pred HHHHhh
Q 015250 393 KAFYES 398 (410)
Q Consensus 393 ~af~~~ 398 (410)
..++++
T Consensus 160 ~~~i~~ 165 (268)
T cd07367 160 AQYVEK 165 (268)
T ss_pred HHHHHh
Confidence 999887
No 147
>COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB [Function unknown]
Probab=31.34 E-value=51 Score=27.08 Aligned_cols=21 Identities=43% Similarity=0.330 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHCCCCEeEE
Q 015250 319 GVTAFLFKEIAKLHNLPTQEF 339 (410)
Q Consensus 319 ~~~~~~l~~~A~~~~Ip~Q~~ 339 (410)
..+++.|.+.|++++||+|..
T Consensus 31 G~iAe~II~~Ake~~Vpi~ed 51 (92)
T COG2257 31 GEIAEKIIEKAKEHGVPIQED 51 (92)
T ss_pred hHHHHHHHHHHHHcCCCcccC
Confidence 378899999999999999974
No 148
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=29.72 E-value=67 Score=32.70 Aligned_cols=46 Identities=17% Similarity=-0.068 Sum_probs=29.8
Q ss_pred CceEEecc-CCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEccccc
Q 015250 185 NEFIFSGR-LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEV 233 (410)
Q Consensus 185 ~~~i~gka-lDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEV 233 (410)
++++.|++ .|++.++++++.|++.+.... . ..+...++++++.||.
T Consensus 98 ~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~--~-~~~~~v~~~~~~dEE~ 144 (395)
T TIGR03526 98 EEIIYGRGASDQEGGIASMVYAGKIIKDLG--L-LDDYTLLVTGTVQEED 144 (395)
T ss_pred CCEEEecCccccchhHHHHHHHHHHHHHcC--C-CCCceEEEEEeccccc
Confidence 45676754 799999999998876654321 0 0123455677778884
No 149
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=29.54 E-value=56 Score=33.36 Aligned_cols=51 Identities=14% Similarity=-0.006 Sum_probs=36.1
Q ss_pred ceEEec-cCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEcccccCccccc
Q 015250 186 EFIFSG-RLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 239 (410)
Q Consensus 186 ~~i~gk-alDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~v~~~qEEVGsrga~ 239 (410)
+++.|+ +.|+.-+.++++.|++.+.... . ..+..+.+.++..||+|+.+..
T Consensus 107 g~lyGRG~~D~KG~~~a~l~A~~~l~~~~--~-~~~~~v~~~~~~dEE~g~~~~~ 158 (409)
T COG0624 107 GKLYGRGAADMKGGLAAALYALSALKAAG--G-ELPGDVRLLFTADEESGGAGGK 158 (409)
T ss_pred CEEEecCccccchHHHHHHHHHHHHHHhC--C-CCCeEEEEEEEeccccCCcchH
Confidence 456565 5799999999998888765310 0 1244677889999999986555
No 150
>COG1430 Uncharacterized conserved protein [Function unknown]
Probab=29.52 E-value=1.9e+02 Score=25.27 Aligned_cols=57 Identities=26% Similarity=0.321 Sum_probs=31.1
Q ss_pred cEEEEeecC---CCceeeecCCccCCCCeeEEeEE-EeCCCcccccccceeccccEEEEECCCCceE
Q 015250 19 FHIIAAHTD---SPCLKLKPKSASSKSGYLMVNVQ-TYGGGLWHTWFDRDLTVAGRVIVRGSDGSFL 81 (410)
Q Consensus 19 ~~mi~AH~D---e~g~~Vk~~~~i~~~G~~~l~~~-~yGG~~~~tw~dr~L~lagrV~~~~~~g~~~ 81 (410)
+.+--|-++ +-|||-+. +...+.|+|.+ +. +.=..-|+.-+..+| -+++.+++|.+.
T Consensus 16 ~~vevA~t~~~r~~GLMfR~-sl~~d~GMLFv-~~~~~~~~~wMknt~lpL----DiiFid~dg~i~ 76 (126)
T COG1430 16 FAVEVADTFAKRARGLMFRT-SLPDDHGMLFV-FPETRRVAFWMKNTMLPL----DIIFIDSDGRVV 76 (126)
T ss_pred EEEEEeCCHHHHhccccccc-cCCCCceEEEe-cCCCceeEEeeecCCcce----EEEEEcCCCCEE
Confidence 333344444 57999986 33357888742 21 111223444444444 778888788763
No 151
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=27.66 E-value=57 Score=31.81 Aligned_cols=49 Identities=18% Similarity=0.271 Sum_probs=38.7
Q ss_pred CCh-HHHHhcCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHHHHhhccc
Q 015250 349 STI-GPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSS 401 (410)
Q Consensus 349 ~t~-g~i~~s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af~~~~~~ 401 (410)
||. |.+...-.|||++.+|.-.++-+..+. .|++.+.+++.++++.+-.
T Consensus 105 GTVaaA~Ea~~~GipsIA~S~~~~~~~~~~~----~~~e~A~~~~~~lv~~l~~ 154 (252)
T COG0496 105 GTVAAAMEAALLGIPAIAISLAYREAFGKQD----VDFETAAKVARALVEALLA 154 (252)
T ss_pred ehHHHHHHHHHcCccceeeeehhcccccccc----ccHHHHHHHHHHHHHHHHh
Confidence 564 478888899999999998887665444 6888898888888876644
No 152
>PRK13600 putative ribosomal protein L7Ae-like; Provisional
Probab=26.26 E-value=1.3e+02 Score=24.26 Aligned_cols=22 Identities=14% Similarity=0.036 Sum_probs=19.9
Q ss_pred CHHHHHHHHHHHHHCCCCEeEE
Q 015250 318 SGVTAFLFKEIAKLHNLPTQEF 339 (410)
Q Consensus 318 ~~~~~~~l~~~A~~~~Ip~Q~~ 339 (410)
++.+...+..+|++.+|||-+.
T Consensus 40 ~~~vv~~l~~lceek~Ip~v~V 61 (84)
T PRK13600 40 EVYLMTRVLSQINQKNIPVSFF 61 (84)
T ss_pred CHHHHHHHHHHHHHcCCCEEEE
Confidence 6788899999999999999874
No 153
>COG5304 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=25.71 E-value=27 Score=28.52 Aligned_cols=22 Identities=23% Similarity=0.297 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHCCCCEeEEE
Q 015250 319 GVTAFLFKEIAKLHNLPTQEFV 340 (410)
Q Consensus 319 ~~~~~~l~~~A~~~~Ip~Q~~~ 340 (410)
......+++-|.+.|+|||++.
T Consensus 60 s~dLeaIK~kaSa~GlpYQtyI 81 (92)
T COG5304 60 SSDLEAIKQKASAEGLPYQTYI 81 (92)
T ss_pred HHHHHHHHHHHhhcCCcHHHHH
Confidence 3456788999999999999865
No 154
>cd07373 2A5CPDO_A The alpha subunit of the Class III extradiol dioxygenase, 2-amino-5-chlorophenol 1,6-dioxygenase, which catalyzes the oxidization and subsequent ring-opening of 2-amino-5-chlorophenol. 2-amino-5-chlorophenol 1,6-dioxygenase (2A5CPDO) catalyzes the oxidization and subsequent ring-opening of 2-amino-5-chlorophenol, which is an intermediate during p-chloronitrobenzene degradation. This enzyme is a member of the class III extradiol dioxygenase family, a group of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. The active enzyme is probably a heterotetramer, composed of two alpha and two beta subunits. The alpha and beta subunits share significant sequence similarity and may have evolved by gene duplication. This model describes the alpha subunit, which does not contain a potential metal binding site and may not possess catalytic activity.
Probab=24.17 E-value=4.9e+02 Score=25.30 Aligned_cols=76 Identities=8% Similarity=-0.180 Sum_probs=50.7
Q ss_pred cccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhc---CCCCcEEEeccccccccchhhhcCHHHHHHHHHH
Q 015250 315 YATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILAS---GVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRH 391 (410)
Q Consensus 315 ~~t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s---~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~l 391 (410)
+-.|+.+++.|.+.++++|||.+......-..-=+|.-|+... ...+|++.++++.. .+.+..+.+-+.
T Consensus 86 ~~g~~eLA~~i~~~~~~~gi~~~~~~~~~~~lDHG~~vPL~~l~~~~~~iPvV~~s~~~~--------~~~~~~~~lG~a 157 (271)
T cd07373 86 IRSDTALAEACVTACPEHGVHARGVDYDGFPIDTGTITACTLMGIGTEALPLVVASNNLY--------HSGEITEKLGAI 157 (271)
T ss_pred cCCCHHHHHHHHHHHHHCCCcEEEecCCCCCCcchhHHHHHHHcccCCCCCEEEEEeCCC--------CCHHHHHHHHHH
Confidence 4459999999999999999999842210000112555676655 35689999998651 255566777777
Q ss_pred HHHHHhh
Q 015250 392 FKAFYES 398 (410)
Q Consensus 392 l~af~~~ 398 (410)
|...++.
T Consensus 158 l~~~l~~ 164 (271)
T cd07373 158 AADAAKD 164 (271)
T ss_pred HHHHHHH
Confidence 7766654
No 155
>PRK13601 putative L7Ae-like ribosomal protein; Provisional
Probab=23.99 E-value=2.4e+02 Score=22.58 Aligned_cols=32 Identities=9% Similarity=0.017 Sum_probs=23.6
Q ss_pred CCccEEEEcCCCccccCHHHHHHHHHHHHHCCCCEe
Q 015250 302 QKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQ 337 (410)
Q Consensus 302 G~Gpvi~~~~~~~~~t~~~~~~~l~~~A~~~~Ip~Q 337 (410)
|+.-.+-+..+. ++.+...+++.|+.++||+.
T Consensus 23 gkakLViiA~Da----~~~~~k~i~~~c~~~~Vpv~ 54 (82)
T PRK13601 23 CNVLQVYIAKDA----EEHVTKKIKELCEEKSIKIV 54 (82)
T ss_pred CCeeEEEEeCCC----CHHHHHHHHHHHHhCCCCEE
Confidence 444444444333 68999999999999999994
No 156
>PF02643 DUF192: Uncharacterized ACR, COG1430; InterPro: IPR003795 This entry describes proteins of unknown function.; PDB: 3M7A_B 3PJY_B.
Probab=23.95 E-value=1.3e+02 Score=25.12 Aligned_cols=36 Identities=19% Similarity=0.317 Sum_probs=21.2
Q ss_pred CCeeEEeEEEeCCCcccccccceeccccEEEEECCCCceE
Q 015250 42 SGYLMVNVQTYGGGLWHTWFDRDLTVAGRVIVRGSDGSFL 81 (410)
Q Consensus 42 ~G~~~l~~~~yGG~~~~tw~dr~L~lagrV~~~~~~g~~~ 81 (410)
.|++. .|.....++||-+...+.=-|.+.+++|++.
T Consensus 27 ~gMLF----~~~~~~~~~~~M~~~~~pLDi~fld~~g~Vv 62 (108)
T PF02643_consen 27 EGMLF----IFPCPSVHTFWMKNTRFPLDIAFLDSDGRVV 62 (108)
T ss_dssp EEEEE----EECCEEEEEE--TT--S-EEEEEE-TTSBEE
T ss_pred cEEEE----ecCCCCeEEEEEEccceeEEEEEECCCCeEE
Confidence 47764 4566667888888666666888898888763
No 157
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=23.57 E-value=1.4e+02 Score=28.97 Aligned_cols=64 Identities=14% Similarity=0.171 Sum_probs=41.3
Q ss_pred HHHHHHCCCCEeEEEeecCCCCCCChHHHHh-cCCCCcEEEeccccccccchhhhcCHHHHHHHHHHHHHH
Q 015250 326 KEIAKLHNLPTQEFVVRNDMGCGSTIGPILA-SGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAF 395 (410)
Q Consensus 326 ~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~-s~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~af 395 (410)
+++.++.+|. ..+.|+....|++...+.. ...|||++.|.=|...-+ ..-..|++.+++.+...
T Consensus 190 ~al~~~~~i~--~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~~~----~~~~~~~~el~~~l~~~ 254 (256)
T TIGR00715 190 KALLREYRID--AVVTKASGEQGGELEKVKAAEALGINVIRIARPQTIPG----VAIFDDISQLNQFVARL 254 (256)
T ss_pred HHHHHHcCCC--EEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCCCC----CccCCCHHHHHHHHHHh
Confidence 5677888875 4455663334567777765 447999999999975211 22235667777666554
No 158
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=22.93 E-value=87 Score=32.95 Aligned_cols=30 Identities=10% Similarity=0.046 Sum_probs=19.7
Q ss_pred ceEEEEEeCCCCCCCCCcEEEEeecCCCce
Q 015250 2 SCLVAFAVGQKYSVGNGFHIIAAHTDSPCL 31 (410)
Q Consensus 2 gslia~~~g~~~~~~~~~~mi~AH~De~g~ 31 (410)
||+++...|+....+.+.+++.+|||-+..
T Consensus 47 ~n~~~~~~~~~g~~~~~~l~l~~HlDtV~~ 76 (477)
T TIGR01893 47 GNVLIRKPATPGYENHPPIVLQGHMDMVCE 76 (477)
T ss_pred CeEEEEEcCCCCCCCCCeEEEEeeccccCC
Confidence 688887655321111246999999998754
No 159
>PRK06683 hypothetical protein; Provisional
Probab=22.23 E-value=2.2e+02 Score=22.71 Aligned_cols=34 Identities=12% Similarity=0.049 Sum_probs=25.8
Q ss_pred CCccEEEEcCCCccccCHHHHHHHHHHHHHCCCCEeEE
Q 015250 302 QKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEF 339 (410)
Q Consensus 302 G~Gpvi~~~~~~~~~t~~~~~~~l~~~A~~~~Ip~Q~~ 339 (410)
|+.-.+-+..+. ++.+...+++.|+.++||+-++
T Consensus 26 gkaklViiA~Da----~~~~~~~i~~~~~~~~Vpv~~~ 59 (82)
T PRK06683 26 GIVKEVVIAEDA----DMRLTHVIIRTALQHNIPITKV 59 (82)
T ss_pred CCeeEEEEECCC----CHHHHHHHHHHHHhcCCCEEEE
Confidence 555555555443 7789999999999999999765
No 160
>PF07431 DUF1512: Protein of unknown function (DUF1512); InterPro: IPR009995 This family consists of several archaeal proteins of around 370 residues in length. The function of this family is unknown.
Probab=21.90 E-value=6.6e+02 Score=25.83 Aligned_cols=127 Identities=17% Similarity=0.206 Sum_probs=78.6
Q ss_pred ceEEeccCCcchhHHHHHHHHHHcCCCCCCCCCCCceEEE-EEEcccccCcccccccCCcc--hHHHHHHHHHhcCCCCC
Q 015250 186 EFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMV-ALFDNEEVGSDSYQGAGAPT--MFQAIRRIVGSLAHEHV 262 (410)
Q Consensus 186 ~~i~gkalDnr~g~~~~l~al~~~~~~~~~~~~~~~~~~~-v~~~qEEVGsrga~gA~~~~--~p~~l~ri~~~~~~~~~ 262 (410)
-|..|.-+-|=+|=.++.+.+...... .....+.+. +-+.+..+-..=|.|-.|++ .-++++++..-.+
T Consensus 174 aF~~G~PIGDgaGPLVA~~l~~~~~~~----~~~~dtv~~e~~~egRrv~viKA~GPGstVGrpgeave~i~~~~~---- 245 (355)
T PF07431_consen 174 AFSKGQPIGDGAGPLVAGRLMENCSKW----EIAKDTVIAECEFEGRRVYVIKAEGPGSTVGRPGEAVEYIVEKLG---- 245 (355)
T ss_pred HHhcCCCCCCCcchHHHHHHHhcCccc----ccccccEEEEEEECCcEEEEEeccCCCccCCChHHHHHHHHHHhc----
Confidence 467788888888888887766655421 112234444 67777777777777776665 3445555554332
Q ss_pred ChhHHHHHhhccceEEEecCCCCCCCCCccccccCCCcCCCccEEEEcCCCccccCHHHHHHHHHHHHHCCCCEeEEEee
Q 015250 263 SETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVR 342 (410)
Q Consensus 263 ~~~~~~~~~~~s~~is~Dv~~a~~P~~~~~~~~~~~~~LG~Gpvi~~~~~~~~~t~~~~~~~l~~~A~~~~Ip~Q~~~~~ 342 (410)
-++|..|.+|.+-=.- -++.....=|-|+++ .+-+ .=.-.++++|-++|||+--.+.|
T Consensus 246 --------~k~~~IITVDAALKLE------GE~TG~vAEGvGvAi--Gg~G------~EK~~IE~~Atky~IPl~AiiIK 303 (355)
T PF07431_consen 246 --------GKVDLIITVDAALKLE------GEETGSVAEGVGVAI--GGPG------VEKFNIERIATKYGIPLYAIIIK 303 (355)
T ss_pred --------CCccEEEEehhhhhcc------Cccccchhhcccccc--CCCC------hhhhhHHHHHHhcCCCceeeeee
Confidence 1789999999766332 112223344555543 3322 22356899999999999877765
No 161
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=21.71 E-value=88 Score=25.11 Aligned_cols=20 Identities=40% Similarity=0.305 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHCCCCEeEE
Q 015250 320 VTAFLFKEIAKLHNLPTQEF 339 (410)
Q Consensus 320 ~~~~~l~~~A~~~~Ip~Q~~ 339 (410)
.++..|+++|+++|||+-..
T Consensus 27 ~~A~~I~~~A~e~~VPi~~~ 46 (82)
T TIGR00789 27 EVAERIIEIAKKHGIPIVED 46 (82)
T ss_pred HHHHHHHHHHHHcCCCEEeC
Confidence 67899999999999998753
No 162
>cd07363 45_DOPA_Dioxygenase The Class III extradiol dioxygenase, 4,5-DOPA Dioxygenase, catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine. This subfamily is composed of plant 4,5-DOPA Dioxygenase, the uncharacterized Escherichia coli protein Jw3007, and similar proteins. 4,5-DOPA Dioxygenase catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine (4,5-DOPA). The reaction results in the opening of the cyclic ring between carbons 4 and 5 and producing an unstable seco-DOPA that rearranges to betalamic acid. 4,5-DOPA Dioxygenase is a key enzyme in the biosynthetic pathway of the plant pigment betalain. Homologs of DODA are present not only in betalain-producing plants but also in bacteria and archaea. This enzyme is a member of the class III extradiol dioxygenase family, a group of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated ca
Probab=21.55 E-value=3e+02 Score=26.42 Aligned_cols=71 Identities=14% Similarity=0.010 Sum_probs=48.4
Q ss_pred ccCHHHHHHHHHHHHHCCCCEeEEEeecCCCCCCChHHHHhc--CCCCcEEEeccccccccchhhhcCHHHHHHHHHHHH
Q 015250 316 ATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILAS--GVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFK 393 (410)
Q Consensus 316 ~t~~~~~~~l~~~A~~~~Ip~Q~~~~~~d~~~G~t~g~i~~s--~~Gi~ti~igiP~ryMHS~~E~~~~~D~~~~~~ll~ 393 (410)
-.|+.+++.|.+.+++.||+.+....+ . --=++.-|.... ...+|++-|++++.+ +.+....+-+.|.
T Consensus 77 ~g~~eLa~~i~~~l~~~gi~~~~~~~~-~-lDHG~~vPL~~~~p~~~iPvV~isi~~~~--------~~~~~~~lG~aL~ 146 (253)
T cd07363 77 PGSPELAERVAELLKAAGIPARLDPER-G-LDHGAWVPLKLMYPDADIPVVQLSLPASL--------DPAEHYALGRALA 146 (253)
T ss_pred CCCHHHHHHHHHHHHhcCCCccccCCc-C-CcccHHHHHHHHcCCCCCcEEEEEecCCC--------CHHHHHHHHHHHH
Confidence 459999999999999999998863211 0 011444454443 357999999998874 3466666666666
Q ss_pred HHH
Q 015250 394 AFY 396 (410)
Q Consensus 394 af~ 396 (410)
.+.
T Consensus 147 ~l~ 149 (253)
T cd07363 147 PLR 149 (253)
T ss_pred hhh
Confidence 644
No 163
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=21.52 E-value=1.3e+02 Score=30.34 Aligned_cols=33 Identities=24% Similarity=0.328 Sum_probs=24.0
Q ss_pred CCChHHHHhcCCCCcEEEeccccc-cccchhhhcC
Q 015250 348 GSTIGPILASGVGIRTVDCGIAQL-SMHSVREICG 381 (410)
Q Consensus 348 G~t~g~i~~s~~Gi~ti~igiP~r-yMHS~~E~~~ 381 (410)
|+|++.+.. ..|||++.+|.--. -+|++.|-+.
T Consensus 340 g~tD~~~~~-~~gip~v~~Gpg~~~~aH~~dE~v~ 373 (373)
T TIGR01900 340 GWTDVARFS-ALGIPALNFGAGDPLFAHKHDEQCP 373 (373)
T ss_pred CCccHHHHH-hcCCCEEEeCCCChhhccCCCCCCC
Confidence 445555544 46999999998765 5899998763
No 164
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only]
Probab=21.31 E-value=66 Score=33.18 Aligned_cols=21 Identities=38% Similarity=0.599 Sum_probs=0.0
Q ss_pred eEEEEEeCCCCCCCCCcEEEEeecCC
Q 015250 3 CLVAFAVGQKYSVGNGFHIIAAHTDS 28 (410)
Q Consensus 3 slia~~~g~~~~~~~~~~mi~AH~De 28 (410)
++||+..|. ++.+||+||.|+
T Consensus 180 ~~Ia~~~~e-----n~vv~i~AH~DH 200 (486)
T COG4882 180 NVIAVDGGE-----NGVVLIGAHLDH 200 (486)
T ss_pred EEEEecCCC-----CCceEEeechhh
Done!